LiteFold/PDB huggingface dataset:
PDB entry 8za6: Cryo-EM structure of the gdTCR-CD3 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2024-04-24
Authors: Bai, Y., Zhu, Y., Huang, Z.
PDB entry 8za7: ART-ARH type toxin effector-immunity protein pair of Listeria monocytogenes
Classification: TOXIN
Source organism: Listeria monocytogenes EGD-e
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-04-24
Authors: Ouyang, S., Hongxin, G., Huan, W.
PDB entry 8za8: SFX structure of CraCRY in the fully reduced state
Classification: FLAVOPROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-24
Authors: Maestre-Reyna, M., Hosokawa, Y., Wang, P.-H., Saft, M., Caramello, N., Engilberge, S., Franz-Badur, S., Ngura Putu, E.P.G., Nakamura, M., Wu, W.-J., Wu, H.-Y., Lee, C.-C., Huang, W.-C., Huang, K.-F., Chang, Y.-K., Yang, C.-H., Lin, W.-T., Yang, K.-C., Ban, Y., Imura, T., Kazuoka, A., Tanida, E., Owada, S., Joti, Y., Tanaka, R., Tanaka, T., Luo, F., Tono, K., Kiontke, S., Korf, L., Umena, Y., Tosha, T., Bessho, Y., Nango, E., Iwata, S., Royant, A., Tsai, M.-D., Yamamoto, J., Essen, L.-O.
PDB entry 8za9: Cryo-EM structure of HBMBPP-BTN2A1-BTN3A1 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-04-24
Authors: Zheng, J., Gao, W., Zhu, Y., Huang, Z.
PDB entry 8zaa: Cryo-EM structure of intracellular HBMBPP-BTN2A1-BTN3A1 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2024-04-24
Authors: Zheng, J., Gao, W., Zhu, Y., Huang, Z.
PDB entry 8zab: Cryo-EM structure of ectodomains of HBMBPP-BTN2A1-BTN3A1 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2024-04-24
Authors: Zheng, J., Gao, W., Zhu, Y., Huang, Z.
PDB entry 8zac: Crystal structure of BcABA3 from Botrytis cinerea
Classification: LYASE
Source organism: Botrytis cinerea B05.10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-04-25
Authors: Li, S.Y., Li, H., Yang, Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8zad: Crystal structure of RuABA3 from Rutstroemia sp. NJR-2017a WRK4
Classification: LYASE
Source organism: Rutstroemia sp. NJR-2017a WRK4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-25
Authors: Li, S.Y., Li, H., Yang, Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8zae: Crystal structure of RuABA3 from Rutstroemia sp. NJR-2017a WRK4 in complex with FsPP
Classification: LYASE
Source organism: Rutstroemia sp. NJR-2017a WRK4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-04-25
Authors: Li, S.Y., Li, H., Yang, Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8zaf: Crystal structure of SkABA3 from Shimazuella kribbensis
Classification: LYASE
Source organism: Shimazuella kribbensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-04-25
Authors: Li, S.Y., Li, H., Yang, Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8zag: Crystal structure of SkABA3 from Shimazuella kribbensis in complex with PPi
Classification: LYASE
Source organism: Shimazuella kribbensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-04-25
Authors: Li, S.Y., Li, H., Yang, Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8zah: Crystal structure of the channel protein CorA from Campylobacter jejuni
Classification: TRANSPORT PROTEIN
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-25
Authors: Ahn, S.Y., Yoon, S.I.
PDB entry 8zai: Crystal structure of SADS-CoV main protease in complex with N5084
Classification: VIRAL PROTEIN
Source organism: Swine acute diarrhea syndrome coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2024-04-25
Authors: Zhao, X., Zeng, R., Lei, J.
PDB entry 8zaj: Cryo-EM structure of a 55 kDa nucleoplasmin domain of AtFKBP53
Classification: CHAPERONE
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2024-04-25
Authors: Bharambe, N., Saharan, K., Vasudevan, D., Basak, S.
PDB entry 8zak: Crystal structure of the channel protein CorA from Campylobacter jejuni in complex with Ni2+
Classification: TRANSPORT PROTEIN
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-04-25
Authors: Ahn, S.Y., Yoon, S.I.
PDB entry 8zal: EmrAB-TolC MFS-type tripartite multidrug efflux pump EA
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-04-25
Authors: Du, D., Zhong, Z., Tuerxunjiang, M.
PDB entry 8zam: EndoChR2 channelrhodopsin
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-04-25
Authors: Zhang, M.F.
PDB entry 8zan: ExoChR2 channelrhodopsin
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-04-25
Authors: Zhang, M.F.
PDB entry 8zao: ExoKCR1 channelrhodopsin
Classification: MEMBRANE PROTEIN
Source organism: Hyphochytrium catenoides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-04-25
Authors: Zhang, M.F.
PDB entry 8zap: ExoC110T class 1 channelrhodopsin
Classification: MEMBRANE PROTEIN
Source organism: Hyphochytrium catenoides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-04-25
Authors: Zhang, M.F.
PDB entry 8zaq: ExoC110T class 2 channelrhodopsin
Classification: MEMBRANE PROTEIN
Source organism: Hyphochytrium catenoides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-04-25
Authors: Zhang, M.F.
PDB entry 8zar: EmrAB-TolC MFS-type tripartite multidrug efflux pump FA
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2024-04-25
Authors: Du, D., Zhong, Z., Tuerxunjiang, M.
PDB entry 8zas: Crystal structure of Adenine DNA aptamer bound with adenine
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-04-25
Authors: Lin, X., Huang, L.
PDB entry 8zat: Cryo-EM structure of human SLC15A3 (apo)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2024-04-25
Authors: Kasai, S., Zhang, Z., Ohto, U., Shimizu, T.
PDB entry 8zau: Crystal structure of a methyl transferase ribozyme mutant - C29U and A59G
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2024-04-25
Authors: Ren, Y., Huang, L.
PDB entry 8zav: alcohol dehydrogenases KpADH mutant - S9Y/F161K
Classification: STRUCTURAL PROTEIN
Source organism: Vanderwaltozyma polyspora DSM 70294
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-04-25
Authors: Zhang, L., Ni, Y., Xu, G.C.
PDB entry 8zaw: Crystal structure of PNPase in Anabaena
Classification: RNA BINDING PROTEIN
Source organism: Anabaena
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-04-25
Authors: Peng, Y.J.
PDB entry 8zax: Crystal structure of a short-chain dehydrogenase from Lactobacillus fermentum with NADPH
Classification: HYDROLASE
Source organism: Limosilactobacillus fermentum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-04-25
Authors: Wang, J.J., Cong, L., Wei, H.L., Liu, W.D., You, S.
PDB entry 8zay: Crystal structure of Fab from mouse monoclonal antibody 4A9 against Aquifex aeolicus RseP PDZ tandem
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-04-25
Authors: Adachi, Y., Nogi, T.
PDB entry 8zaz: Crystal structure of Chitinase 3-like protein 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2024-04-25
Authors: Zhao, H.L., Huang, M.D., Jiang, L.G.
PDB entry 8zb0: Cryo-EM structure of human ZnT1
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-04-25
Authors: Sun, S., Xie, E., Xu, S., Ji, S.
PDB entry 8zb1: Cryo-EM structure of the C26-FB1-bound Lac1-Lip1 complex
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2024-04-25
Authors: Xie, T., Zhang, Z., Fang, Q., Gong, X.
PDB entry 8zb2: L-Methionine oxidase from Burkholderiales bacterium
Classification: OXIDOREDUCTASE
Source organism: Burkholderiales bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2024-04-26
Authors: Kawamura, Y., Chisuga, T., Nakano, S.
PDB entry 8zb3: Crystal structure of NudC from Mycobacterium abscessus
Classification: HYDROLASE
Source organism: Mycobacteroides abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-04-26
Authors: Meng, L., Zhang, Y., Xu, J., Liu, J.
PDB entry 8zb4: Crystal structure of NudC from Mycobacterium abscessus in complex with NAD
Classification: HYDROLASE
Source organism: Mycobacteroides abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-04-26
Authors: Meng, L., Zhang, Y., Xu, J., Liu, J.
PDB entry 8zb5: Crystal structure of NudC from Mycobacterium abscessus in complex with AMP
Classification: HYDROLASE
Source organism: Mycobacteroides abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-04-26
Authors: Meng, L., Zhang, Y., Xu, J., Liu, J.
PDB entry 8zb6: Yeast-expressed polio type 2 stabilized virus-like particles
Classification: VIRAL PROTEIN
Source organism: Poliovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-04-26
Authors: Hong, Q., Cong, Y.
PDB entry 8zb7: Human left ventricle ATM complex
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2024-04-26
Authors: Li, D.N., Zhao, Q.Y., Liu, C.
PDB entry 8zb8: Crystal structure of T2R-TTL-DPP21 complex
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2024-04-26
Authors: Wu, C.Y., Chen, J.J.
PDB entry 8zb9: CryoEM structure of non-structural protein 1 dimer from Yellow Fever Virus
Classification: VIRAL PROTEIN
Source organism: Yellow fever virus 17D
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-04-26
Authors: Pan, Q., Chen, Q., Hu, H.L.
PDB entry 8zba: CryoEM structure of non-structural protein 1 tetramer from Yellow Fever Virus
Classification: VIRAL PROTEIN
Source organism: Yellow fever virus 17D
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2024-04-26
Authors: Pan, Q., Chen, Q., Hu, H.L.
PDB entry 8zbb: Cryo-EM structure of outward state Anhydromuropeptide permease (AmpG) G50W/L269W
Classification: PEPTIDE BINDING PROTEIN
Source organism: Escherichia coli; Homo sapiens; synthetic construct; Yokenella regensburgei
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-04-26
Authors: Yoo, Y., Chang, N., Kim, U., Kim, H., Cho, H.
PDB entry 8zbc: An acyltransferase with selective perhydrolytic activity
Classification: HYDROLASE
Source organism: Pelagibius litoralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2024-04-26
Authors: Yin, Z., Jing, W.
PDB entry 8zbd: Crystal structure of Persulfide Dioxygenase from Beggiatoa leptomitoformis
Classification: OXIDOREDUCTASE
Source organism: Beggiatoa leptomitoformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2024-04-26
Authors: Gabdulkhakov, A.G., Tishchenko, T.V., Rudenko, T.S.
PDB entry 8zbe: cryo-EM structure of the octreotide-bound SSTR5-Gi complex
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Oplophorus gracilirostris; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2024-04-26
Authors: Li, Y.G., Meng, X.Y., Yang, X.R., Ling, S.L., Shi, P., Tian, C.L., Yang, F.
PDB entry 8zbf: Crystal structure of the A58-T10 DNA aptamer in complex with SARS-CoV-2 N-NTD
Classification: DNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-04-26
Authors: Chen, X., Huang, L.
PDB entry 8zbg: Crystal structure of TEAD3 YAP binding domain with compound 15
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2024-04-26
Authors: Yoo, Y., Kim, H.
PDB entry 8zbh: Crystal structure of TEAD3 YAP binding domain with compound 3
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-04-26
Authors: Yoo, Y., Kim, H.
PDB entry 8zbi: Cryo-EM structure of Somatostatin receptor 3 (SSTR3) with Gi1 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-04-26
Authors: Yun, J.H.
PDB entry 8zbj: Cryo-EM structure of Somatostatin receptor 5 (SSTR5) with Gi1 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-04-26
Authors: Kim, Y., Yun, J.H.
PDB entry 8zbk: Mouse left ventricle ATM complex
Classification: PROTEIN FIBRIL
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.28 Å
Deposited: 2024-04-26
Authors: Li, D.N., Zhao, Q.Y., Liu, C.
PDB entry 8zbl: Glycosidated glycyrrhetinic acid derivative as a soluble epoxide hydrolase inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-04-26
Authors: Wang, H., Feng, Y., Ge, Z.H.
PDB entry 8zbm: RAT skeletal muscle ATM complex
Classification: PROTEIN FIBRIL
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2024-04-26
Authors: Li, D.N., Zhao, Q.Y., Liu, C.
PDB entry 8zbn: Mouse MYH6 R404Q left ventricle ATM complex
Classification: PROTEIN FIBRIL
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-04-26
Authors: Li, D.N., Zhao, Q.Y., Liu, C.
PDB entry 8zbo: Crystal structure of the biphotochromic fluorescent protein moxSAASoti (F97M variant) in its green on-state
Classification: FLUORESCENT PROTEIN
Source organism: Stylocoeniella armata
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-04-26
Authors: Boyko, K.M., Matyuta, I.O., Marynich, N.K., Minyaev, M.E., Khadiyatova, A.A., Popov, V.O., Savitsky, A.P.
PDB entry 8zbp: The crystal structure of SARS-CoV-2 main protease in complex with chebulagic acid (CHLA)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2024-04-27
Authors: Zhao, Y., Feng, L.
PDB entry 8zbq: Local map of Omicron Subvariant JN.1 RBD with ACE2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2024-04-27
Authors: Yan, R.H., Yang, H.N.
PDB entry 8zbr: Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (apo-form)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-04-27
Authors: Xie, Z., Long, F.
PDB entry 8zbs: Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (in complex with vincristine)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-04-27
Authors: Xie, Z., Long, F.
PDB entry 8zbt: Cryo-EM structure of nanodisc-reconstituted human MRP4 withE1202Q mutation (in complex with 5-Fluorouracil)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-04-27
Authors: Xie, Z., Long, F.
PDB entry 8zbu: Cryo-EM structure of nanodisc-reconstituted human MRP4 withE1202Q mutation (in complex with lapatinib)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2024-04-27
Authors: Xie, Z., Long, F.
PDB entry 8zbv: alpha-L-fucosidase from Pontiella sulfatireligans F21
Classification: HYDROLASE
Source organism: Pontiella sulfatireligans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2024-04-28
Authors: Zhao, P., Bai, L., Wang, S.
PDB entry 8zbw: Cryo-EM structure of formyl peptide receptor 2/C1R receptor in complex with Gi
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2024-04-28
Authors: Zhou, Q., Lin, S., Li, G.
PDB entry 8zby: SARS-CoV-2 Omicron BA.1 spike trimer (x2-4P) in complex with 3 D1F6 Fabs (0 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2024-04-28
Authors: Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.
PDB entry 8zbz: SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with 3 D1F6 Fabs (1 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.71 Å
Deposited: 2024-04-28
Authors: Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.
PDB entry 8zc0: SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with 3 D1F6 Fabs (2 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2024-04-28
Authors: Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.
PDB entry 8zc1: SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with D1F6 Fab, focused refinement of RBD region
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2024-04-28
Authors: Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.
PDB entry 8zc2: SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.82 Å
Deposited: 2024-04-28
Authors: Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.
PDB entry 8zc3: SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with 3 D1F6 Fabs (1 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.69 Å
Deposited: 2024-04-28
Authors: Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.
PDB entry 8zc4: SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with 3 D1F6 Fabs (2 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2024-04-28
Authors: Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.
PDB entry 8zc5: SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, focused refinement of RBD region
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.91 Å
Deposited: 2024-04-28
Authors: Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.
PDB entry 8zc6: SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, head-to-head aggregate
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.85 Å
Deposited: 2024-04-28
Authors: Liu, B., Gao, X., Li, Z., Chen, Q., He, J., Xiong, X.
PDB entry 8zc7: Crystallographic analysis of MitM, which catalyzes the post-mitosane modification in mitomycin biosynthesis
Classification: TRANSFERASE
Source organism: Streptomyces caespitosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2024-04-28
Authors: Xia, M., Dong, D.
PDB entry 8zc8: The structure of MitM and mitomycin A with SAH in mitomycin
Classification: TRANSFERASE
Source organism: Streptomyces caespitosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-04-28
Authors: Xia, M., Dong, D.
PDB entry 8zc9: The Cryo-EM structure of DSR2-Tail tube-NAD+ complex
Classification: IMMUNE SYSTEM
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-04-29
Authors: Wang, R., Xu, Q., Wu, Z., Li, J., Yang, R., Shi, Z., Li, F.
PDB entry 8zca: Crystal structure of human CD47 ECD bound to Fab of Hu1C8
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-04-29
Authors: Chen, Z., Ding, J.
PDB entry 8zcc: Crystal structure of HCoV-NL63 main protease with X77
Classification: VIRAL PROTEIN
Source organism: Human coronavirus NL63
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-04-29
Authors: Xu, J., Li, W.W., Yin, X.S., Li, J.
PDB entry 8zce: Cryo-EM structure of GPR4 complexed with Gs in pH6.0
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-04-29
Authors: Yue, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8zcf: Cryo-EM structure of GPR4 complexed with Gs in pH7.5
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-04-29
Authors: Yue, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8zci: X-ray structure of the human heart fatty acid-binding protein complexed with R-Ibuprofen
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-04-29
Authors: Sugiyama, S., Tanaka, J., Matsuoka, S., Murata, M.
PDB entry 8zcj: Cryo-EM structure of the pasireotide-bound SSTR5-Gi complex
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Homo sapiens; Oplophorus gracilirostris; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2024-04-29
Authors: Li, Y.G., Meng, X.Y., Yang, X.R., Ling, S.L., Shi, P., Tian, C.L., Yang, F.
PDB entry 8zck: Serial Femtosecond Crystallography Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-04-30
Authors: Destan, E., DeMirci, H.
PDB entry 8zcl: Ambient Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-04-30
Authors: Destan, E., DeMirci, H.
PDB entry 8zcm: Cryogenic Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2024-04-30
Authors: Destan, E., DeMirci, H.
PDB entry 8zcr: Structure of PI9
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-04-30
Authors: Zhou, A., Yan, T.
PDB entry 8zcs: Crystal structure of the MBP-MCL1 complex with highly selective and potent Cyclic peptide inhibitor
Classification: APOPTOSIS
Source organism: Escherichia coli K-12; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2024-04-30
Authors: Li, F.W.
PDB entry 8zcx: Crystal Structure of a novel Aldehyde Dehydrogenase from Klebsiella pneumoniae
Classification: OXIDOREDUCTASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2024-04-30
Authors: Zhang, J., Han, Y., Liu, W., Zhang, W.
PDB entry 8zcy: Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in an interrogation state
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-04-30
Authors: Omura, S.N., Nakagawa, R., Yamashita, K., Nishimasu, H., Nureki, O.
PDB entry 8zcz: Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in an intermediate state
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-04-30
Authors: Omura, S.N., Nakagawa, R., Yamashita, K., Nishimasu, H., Nureki, O.
PDB entry 8zd0: Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in a translocation state
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2024-04-30
Authors: Omura, S.N., Nakagawa, R., Yamashita, K., Nishimasu, H., Nureki, O.
PDB entry 8zd1: Cryo-EM structure of the xGPR4-Gs complex in pH6.2
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct; Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-04-30
Authors: Rong, N.K., Wen, X., Yang, F., Sun, J.P.
PDB entry 8zd2: NMR structure of the (CGG-dsDNA:ND=) 1:2 complex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-05-01
Authors: Sakurabayashi, S., Furuita, K., Yamada, T., Nomura, M., Nakatani, K., Kojima, C.
PDB entry 8zd3: Crystal structure of ALPK1-N+K in complex with CDP-heptose
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-01
Authors: She, Y., Ding, J.J., Shao, F.
PDB entry 8zd4: Cryo-EM structure of the gdTCR-ECD
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-01
Authors: Bai, Y., Zhu, Y., Huang, Z.
PDB entry 8zd5: Crystal structure of E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris) in the holo form complexed with 22E1 Fv-clasp
Classification: METAL BINDING PROTEIN
Source organism: Canis lupus familiaris; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2024-05-01
Authors: Shino, Y., Furukawa, Y., Muraki, N.
PDB entry 8zd6: Crystal structure of E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris) in the apo form complexed with 22E1 Fv-clasp
Classification: METAL BINDING PROTEIN
Source organism: Canis lupus familiaris; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2024-05-01
Authors: Shino, Y., Furukawa, Y., Muraki, N.
PDB entry 8zd7: NMR structure of the CGG-dsDNA-sND complex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-05-01
Authors: Sakurabayashi, S., Furuita, K., Yamada, T., Nomura, M., Nakatani, K., Kojima, C.
PDB entry 8zd8: NMR structure of the (CGG-dsDNA:ND=) 1:1 complex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-05-01
Authors: Sakurabayashi, S., Furuita, K., Yamada, T., Nomura, M., Nakatani, K., Kojima, C.
PDB entry 8zda: Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in a catalytically active state
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-05-01
Authors: Omura, S.N., Nakagawa, R., Yamashita, K., Nishimasu, H., Nureki, O.
PDB entry 8zdb: Cryo-EM structure of the human ubiquitylated 40S ribosome with RIOK3
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-01
Authors: Huang, Z., Wang, M., Li, Y., Beckmann, R., Cheng, J.
PDB entry 8zdc: Cryo-EM structure of the human ubiquitylated pre-40S ribosome with RIOK3
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-05-01
Authors: Huang, Z., Wang, M., Li, Y., Beckmann, R., Cheng, J.
PDB entry 8zdd: Cryo-EM structure of the human ubiquitylated pre-40S ribosome with RIOK3 (without NOB1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-05-01
Authors: Huang, Z., Wang, M., Li, Y., Beckmann, R., Cheng, J.
PDB entry 8zde: Crystal structure of HsmR with DNA bound
Classification: TRANSCRIPTION
Source organism: Clostridioides difficile; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2024-05-02
Authors: Park, S.Y.
PDB entry 8zdf: Cryo-EM structure of the integrin avb3 with CWHM-12, conformation 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2024-05-02
Authors: Xi, Z.
PDB entry 8zdg: Cryo-EM structure of the integrin avb3 with CWHM-12, conformation 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2024-05-02
Authors: Xi, Z.
PDB entry 8zdh: Cryo-EM structure of Mycobacteriophage Douge genome-packed capsid (gp8 and gp113)
Classification: VIRUS
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdi: Cryo-EM structure of Mycobacteriophage Douge genome-free capsid (gp8)
Classification: VIRUS
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdj: Cryo-EM structure of Mycobacteriophage Douge genome-packed connector (gp5, gp9, gp10, gp12 and gp13)
Classification: VIRAL PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdk: Cryo-EM structure of Mycobacteriophage Douge genome-packed vertex (gp8 and gp113)
Classification: VIRAL PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdl: Cryo-EM structure of Mycobacteriophage Douge genome-free connector (gp5, gp9, gp10, gp12 and gp13)
Classification: VIRAL PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdm: Cryo-EM structure of Mycobacteriophage Douge genome-free vertex (gp8)
Classification: VIRAL PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.22 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdn: Cryo-EM structure of Mycobacteriophage Douge genome-free tail tube (gp13)
Classification: VIRAL PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdo: Cryo-EM structure of Mycobacteriophage Douge baseplate (gp13, gp17, gp23, gp16, gp18 and gp20)
Classification: VIRAL PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdp: Cryo-EM structure of Mycobacteriophage Douge Central fiber (gp20)
Classification: VIRAL PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.26 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdq: Cryo-EM structure of Mycobacteriophage Douge complete baseplate (gp13, gp17, gp23, gp16, gp18 and gp20)
Classification: VIRAL PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-05-02
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zdr: Cryo-EM structure of the Cas9d-sgRNA-target DNA complex
Classification: ANTIVIRAL PROTEIN
Source organism: metagenome
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-05-03
Authors: Zhang, H., Li, X., Liu, Z.
PDB entry 8zds: Structure of the Salmonella flagellar MS-ring with C11 symmetry applied
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-03
Authors: Kinoshita, M., Makino, F., Miyata, T., Imada, K., Minamino, T., Namba, K.
PDB entry 8zdt: Structure of the RBM3 ring of Salmonella flagellar MS-ring protein FliF with C33 symmetry applied
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-05-03
Authors: Kinoshita, M., Makino, F., Miyata, T., Imada, K., Minamino, T., Namba, K.
PDB entry 8zdu: Structure of the RBM3 ring of Salmonella flagellar MS-ring protein FliF with C34 symmetry applied
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-03
Authors: Kinoshita, M., Makino, F., Miyata, T., Imada, K., Minamino, T., Namba, K.
PDB entry 8zdv: The cryoEM structure of H5N8 HA in an auto inhibited state
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-03
Authors: Li, R., Gao, J., Wang, L., Gui, M., Xiang, Y.
PDB entry 8zdw: The cryoEM structure of H5N1 HA split from symmetric filament in conformation A
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus (strain A/Vietnam/1203/2004 H5N1); Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2024-05-03
Authors: Li, R., Gao, J., Wang, L., Gui, M., Xiang, Y.
PDB entry 8zdx: Crystal structure of MjHKU4r-CoV-1 RBD bound to hDPP4
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Pangolin coronavirus HKU4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-05-03
Authors: Yang, M., Li, Z., Xu, Y., Zhang, S.
PDB entry 8zdy: Cryo-EM structure of Cas8-HNH system at target free state
Classification: ANTIVIRAL PROTEIN
Source organism: Selenomonas sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-03
Authors: Zhang, H., Zhu, H., Li, X., Liu, Y.
PDB entry 8zdz: Drosophila mojavensis gustatory receptor 43a(Gr43a) in apo state
Classification: PROTON TRANSPORT
Source organism: Drosophila mojavensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-05-03
Authors: Chen, Q.F., Chen, R.Z., Zhang, R.
PDB entry 8ze0: Drosophila melanogaster gustatory receptor 64a(Gr64a) in apo state
Classification: PROTEIN TRANSPORT
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2024-05-04
Authors: Chen, Q.F., Chen, R.Z., Zhang, R.
PDB entry 8ze2: Drosophila melanogaster gustatory receptor 64a(Gr64a) in Sucrose-bound state
Classification: PROTEIN TRANSPORT
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.57 Å
Deposited: 2024-05-04
Authors: Chen, Q.F., Chen, R.Z., Zhang, R.
PDB entry 8ze3: Drosophila mojavensis gustatory receptor 43a(Gr43a) in Fructose-bound state
Classification: PROTEIN TRANSPORT
Source organism: Drosophila mojavensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-05-04
Authors: Chen, Q.F., Chen, R.Z., Zhang, R.
PDB entry 8ze4: MPXV mRNA cap N7 methyltransferase mutant-H122D
Classification: TRANSFERASE
Source organism: Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.33 Å
Deposited: 2024-05-04
Authors: Chen, A.k., Li, J.X.
PDB entry 8ze6: Crystal structure of MjHKU4r-CoV-1 RBD bound to MjDPP4
Classification: VIRAL PROTEIN
Source organism: Manis javanica; Pangolin coronavirus HKU4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-05-04
Authors: Yang, M., Li, Z., Xu, Y., Zhang, S.
PDB entry 8ze7: Crystal Structure of Concanavalin A Complexed with Lysine
Classification: SUGAR BINDING PROTEIN
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2024-05-04
Authors: Rasheed, S., Arif, R.
PDB entry 8ze8: Arf-GTPase activating protein Asap1 SH3 domain in complex with 440 Kd Ankyrin-B fragment
Classification: PROTEIN BINDING
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-05-04
Authors: Chen, K., Li, Y., Zhao, Y., He, Y., Zhang, M.
PDB entry 8ze9: ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus S154A mutant in complex with diethylhexyl phthalate at 2.4A
Classification: HYDROLASE
Source organism: Sulfobacillus acidophilus DSM 10332
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-05-04
Authors: Verma, S., Choudhary, S., Kumar, P.
PDB entry 8zea: Cryo-EM structure of Mycobacteriophage Douge genome-packed tail tube (gp13)
Classification: VIRAL PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.18 Å
Deposited: 2024-05-04
Authors: Maharana, J., Wang, C.H., Tsai, L.A., Lowary, T.L., Ho, M.C.
PDB entry 8zeb: Crystal structure of BCL-XL bound by cp-B6X-4
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-05-05
Authors: Sun, X.N., Liu, J.X., Wu, D.L.
PDB entry 8zec: AtoB in complex with substrate analogue
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aspergillus ochraceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-05-05
Authors: Ma, K., Fan, A., Lin, W.
PDB entry 8zed: Crystal structure of aldolase AtoB
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aspergillus ochraceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2024-05-05
Authors: Ma, K., Fan, A., Lin, W.
PDB entry 8zee: Cryo-EM structure of an intermediate-state PSII-PRF2' complex during the process of photosystem II repair
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-06
Authors: Li, A., Liu, Z.
PDB entry 8zef: Crystal structure of Staphylococcus aureus DinG protein in complex with ssDNA and Ca2+
Classification: HYDROLASE/DNA
Source organism: Staphylococcus aureus (strain NCTC 8325 / PS 47); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2024-05-06
Authors: Cheng, K., Gao, T., Hao, W.
PDB entry 8zeh: PSI-FCPI-L in Thalassiosira pseudonana
Classification: PHOTOSYNTHESIS
Source organism: Thalassiosira pseudonana CCMP1335
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-05-06
Authors: Feng, Y., Li, Z., Wang, W., Shen, J.R.
PDB entry 8zei: Crystal structure of human cytosolic beta-alanyl lysine dipeptidase with crystal soaked in beta-alanyl histidine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-06
Authors: Chandravanshi, K., Kumar, A., Makde, R.D.
PDB entry 8zej: Structure of E.coli ribosome in complex with an engineered arrest peptide
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2024-05-06
Authors: Sriramoju, M.K., Ko, T.P., Draczkowski, P., Hsu, S.T.D.
PDB entry 8zek: Cryo-EM structure of the E. coli BrxX methyltransferase complexed with Ocr
Classification: TRANSFERASE
Source organism: Escherichia coli; Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-05-06
Authors: Zhu, L., Xu, T.H., Sun, L.T.
PDB entry 8zel: Crystal structure of human cytosolic beta-alanyl lysine dipeptidase Tyr314Phe mutant with a crystal soaked in beta-alanyl ornithine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-06
Authors: Chandravanshi, K., Kumar, A., Makde, R.D.
PDB entry 8zem: Crystal Structure of NLRP3 NACHT domain in complex with NP3-1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2024-05-06
Authors: Shi, C., Liu, Z.M.
PDB entry 8zen: Cryo-EM structure of Adr-2-Adbp-1-dsRBD0 complex
Classification: RNA BINDING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2024-05-06
Authors: Liu, Z.M., Mu, J.Q., Wu, C.
PDB entry 8zeo: Cryo-EM structure of Adr-2-Adbp-1-dsRBD1 complex
Classification: RNA BINDING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-05-06
Authors: Liu, Z.M., Mu, J.Q., Wu, C.
PDB entry 8zep: Cryo-EM structure of Adr-2-Adbp-1-dsRBD2 complex
Classification: RNA BINDING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-05-06
Authors: Liu, Z.M., Mu, J.Q., Wu, C.
PDB entry 8zeq: Molecular Architecture of Human Glycogen Debranching Enzyme: Insights into Glycogen Storage Disease III Pathogenesis
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-05-06
Authors: Guan, H., Chen, H.
PDB entry 8zer: Crystal structure of the complex of Wuhan SARS-CoV-2 RBD (319-541) with P2C5 nanobody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Camelus bactrianus; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-05-06
Authors: Sluchanko, N.N., Varfolomeeva, L.A., Shcheblyakov, D.V., Logunov, D.Y., Gintsburg, A.L., Popov, V.O., Boyko, K.M.
PDB entry 8zes: Crystal structure of the Wuhan SARS-CoV-2 RBD (333-541) complexed with P2C5 nanobody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Camelus bactrianus; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2024-05-06
Authors: Sluchanko, N.N., Varfolomeeva, L.A., Shcheblyakov, D.V., Logunov, D.Y., Gintsburg, A.L., Popov, V.O., Boyko, K.M.
PDB entry 8zet: Tp-PSI-FCPI-S in Thalassiosira pseudonana
Classification: PHOTOSYNTHESIS
Source organism: Thalassiosira pseudonana CCMP1335
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-05-06
Authors: Feng, Y., Li, Z., Shen, J.R., Wang, W.
PDB entry 8zeu: CryoEM structure of GR2002-F(ab')2: TSLP complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2024-05-07
Authors: Zhigang, L., Junjie, H.
PDB entry 8zev: Crystal structure of the dehydratase domain of human fatty acid synthase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-07
Authors: Zhang, L., Zhang, L.
PDB entry 8zex: Biosensor HaloKbp1a
Classification: FLUORESCENT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-05-07
Authors: Wen, Y., Campbell, R.E.
PDB entry 8zey: Anti-CRISPR type I subtype E3;AcrIE3
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.734 Å
Deposited: 2024-05-07
Authors: Kim, D.Y., Park, H.H.
PDB entry 8zf0: pRib-ADP bound OsEDS1-PAD4-ADR1 complex
Classification: PLANT PROTEIN
Source organism: Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-05-07
Authors: Xu, W.Y., Zhang, Y.
PDB entry 8zf1: Crystal structure of a Chemo Triplet Photoenzyme (CTPe)
Classification: PHOTOSYNTHESIS
Source organism: Lactococcus lactis subsp. cremoris (strain MG1363)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-05-07
Authors: Chen, X., Qian, J.Y., Guo, J., Wu, Y.Z., Zhong, F.R.
PDB entry 8zf2: Quorum Sensing master regulator HapR of Photobacterium marinum
Classification: TRANSCRIPTION
Source organism: Photobacterium marinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-07
Authors: Basu Choudhury, G., Saha, A., Datta, S., Ray Chaudhuri, S.
PDB entry 8zf3: Quorum Sensing Master Regulator SmcR of Photobacterium profundum
Classification: TRANSCRIPTION
Source organism: Photobacterium profundum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-05-07
Authors: Basu Choudhury, G., Saha, A., Raychaudhuri, S., Datta, S.
PDB entry 8zf4: Cryo-EM structure of the receptor of xGPR4-Gs complex in pH6.2
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-05-07
Authors: Rong, N.K., Wen, X., Yang, F., Sun, J.P.
PDB entry 8zf6: Cryo-EM structure of the xGPR4-Gs complex in pH6.7
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct; Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-05-07
Authors: Rong, N.K., Wen, X., Yang, F., Sun, J.P.
PDB entry 8zf7: Cryo-EM structure of the receptor of xGPR4-Gs complex in pH6.7
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-05-07
Authors: Rong, N.K., Wen, X., Yang, F., Sun, J.P.
PDB entry 8zf8: L-methionine oxidase from Burkholderia bacterium, K304A mutant
Classification: OXIDOREDUCTASE
Source organism: Burkholderia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-07
Authors: Kawamura, Y., Chisuga, T., Nakano, S.
PDB entry 8zf9: Cryo-EM structure of the mmGPR4-Gs complex in pH7.2
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2024-05-07
Authors: Wen, X., Rong, N.K., Yang, F., Sun, J.P.
PDB entry 8zfa: Cryo-EM structure of the xtGPR4-Gs complex in pH7.2
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct; Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-05-07
Authors: Rong, N.K., Wen, X., Yang, F., Sun, J.P.
PDB entry 8zfb: Cryo-EM structure of the receptor of xtGPR4-Gs complex in pH7.2
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2024-05-07
Authors: Rong, N.K., Wen, X., Yang, F., Sun, J.P.
PDB entry 8zfc: Cryo-EM structure of the mmGPR4-Gs complex in pH7.6
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-05-07
Authors: Wen, X., Rong, N.K., Yang, F., Sun, J.P.