LiteFold/PDB huggingface dataset:
PDB entry 6m7f: Wild-type Cucumene Synthase
Classification: LYASE
Source organism: Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.051 Å
Deposited: 2018-08-20
Authors: Blank, P.N., Pemberton, T.A., Christianson, D.W.
PDB entry 6m7g: Crystal structure of ArsN, N-acetyltransferase with substrate phosphinothricin from Pseudomonas putida KT2440
Classification: TRANSFERASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.657 Å
Deposited: 2018-08-20
Authors: Venkadesh, S., Dheeman, D.S., Yoshinaga, M., Kandavelu, P., Rosen, B.P.
PDB entry 6m7h: Structure of calmodulin with KN93
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-08-20
Authors: Damo, S.M., Pattanayek, R., Johnson, C.N.
PDB entry 6m7i: Crystal structure of KPC-2 with compound 3
Classification: HYDROLASE/INHIBITOR
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2018-08-20
Authors: Akhtar, A., Chen, Y.
PDB entry 6m7j: Mycobacterium tuberculosis RNAP with RbpA/us fork and Corallopyronin
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2018-08-20
Authors: Darst, S.A., Campbell, E.A., Boyaci Selcuk, H., Chen, J.
PDB entry 6m7k: Structure of mouse RECON (AKR1C13) in complex with cyclic AMP-AMP-GMP (cAAG)
Classification: OXIDOREDUCTASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2018-08-20
Authors: Eaglesham, J.B., Whiteley, A.T., de Oliveira Mann, C.C., Morehouse, B.R., Nieminen, E.A., King, D.S., Lee, A.S.Y., Mekalanos, J.J., Kranzusch, P.J.
PDB entry 6m7l: Complex of OxyA with the X-domain from GPA biosynthesis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Actinomadura parvosata subsp. kistnae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6483 Å
Deposited: 2018-08-20
Authors: Greule, A., Izore, T., Tailhades, J., Peschke, M., Schoppet, M., Ahmed, I., Kulik, A., Adamek, M., Ziemert, N., De Voss, J., Stegmann, E., Cryle, M.J.
PDB entry 6m7m: rac-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.101 Å
Deposited: 2018-08-20
Authors: Zee, C., Glynn, C., Gallagher-Jones, M., Miao, J., Santiago, C.G., Cascio, D., Gonen, T., Sawaya, M.R., Rodriguez, J.A.
PDB entry 6m7o: Human DNA polymerase eta ternary complex with Mn2+ and dTMPNPP oppositing cdA
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2018-08-20
Authors: Weng, P., Gao, Y., Yang, W.
PDB entry 6m7p: Human DNA polymerase eta extension complex with cdA at the -2 position
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-08-20
Authors: Gregory, M.T., Yang, W.
PDB entry 6m7t: Human DNA polymerase eta in a non-productive ternary complex with Ca2+ and dTTP oppositing cdA
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-08-21
Authors: Weng, P., Gao, Y., Yang, W.
PDB entry 6m7u: Human DNA polymerase eta in a non-productive ternary complex with Mg2+ and dTMPNPP oppositing cdA
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2018-08-21
Authors: Weng, P., Gao, Y., Yang, W.
PDB entry 6m7v: Human DNA polymerase eta extension complex with cdA at the -1 position
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.062 Å
Deposited: 2018-08-21
Authors: Weng, P., Gao, Y., Yang, W.
PDB entry 6m7w: Role of the highly conserved G68 residue in the yeast phosphorelay protein Ypd1: implications for interactions between histidine phosphotransfer (HPt) and response regulator proteins
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2018-08-21
Authors: Menon, S.K., Soni, K.S., West, A.H.
PDB entry 6m7x: Structure of human CYP11B1 in complex with fadrozole
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.095 Å
Deposited: 2018-08-21
Authors: Scott, E.E., Brixius-Anderko, S.
PDB entry 6m7y: Dehydratase, NisB, bound to a non-eliminable substrate analog
Classification: BIOSYNTHETIC PROTEIN
Source organism: Lactococcus lactis subsp. lactis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.794 Å
Deposited: 2018-08-21
Authors: Cogan, D.P., Nair, S.K.
PDB entry 6m7z: A divergent kinase lacking the glycine-rich loop regulates membrane ultrastructure of the Toxoplasma parasitophorous vacuole
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-08-21
Authors: Beraki, T., Borek, D.M., Reese, M.L.
PDB entry 6m80: Collagen peptide containing aza-proline and aza-glycine
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2018-08-21
Authors: Chenoweth, D.M., Kasznel, A.J., Porter, N.J.
PDB entry 6m81: Crystal structure of TylM1 Y14F bound to SAH and dTDP-phenol
Classification: TRANSFERASE
Source organism: Streptomyces fradiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.782 Å
Deposited: 2018-08-21
Authors: Fick, R.J., McDole, B.G., Trievel, R.C.
PDB entry 6m82: Crystal structure of TylM1 Y14paF bound to SAH and dTDP-phenol
Classification: TRANSFERASE
Source organism: Streptomyces fradiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3971 Å
Deposited: 2018-08-21
Authors: Fick, R.J., McDole, B.G., Trievel, R.C.
PDB entry 6m83: Crystal structure of TylM1 S120A bound to SAH and dTDP-phenol
Classification: TRANSFERASE
Source organism: Streptomyces fradiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3685 Å
Deposited: 2018-08-21
Authors: Fick, R.J., McDole, B.G., Trievel, R.C.
PDB entry 6m84: Crystal structure of cKir2.2 force open mutant in complex with PI(4,5)P2
Classification: METAL TRANSPORT
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2018-08-21
Authors: Lee, S.-J., Ren, F., Yuan, P., Nichols, C.G.
PDB entry 6m85: Crystal Structure of Inward Rectifier Kir2.2 in a different salt condition
Classification: METAL TRANSPORT
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2018-08-21
Authors: Lee, S.-J., Nichols, C.G.
PDB entry 6m86: Crystal Structure of Inward Rectifier Kir2.2 Force Open Mutant
Classification: METAL TRANSPORT
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2018-08-21
Authors: Lee, S.-J., Ren, F., Yuan, P., Nichols, C.G.
PDB entry 6m87: Fab 10A6 in complex with MPTS
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.609 Å
Deposited: 2018-08-21
Authors: Stanfield, R.L., Wilson, I.A.
PDB entry 6m88: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with myricetin
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-08-21
Authors: Wang, H., Shears, S.B.
PDB entry 6m89: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with quercetin
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-08-21
Authors: Wang, H., Shears, S.B.
PDB entry 6m8a: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with luteolin
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-08-21
Authors: Wang, H., Shears, S.B.
PDB entry 6m8b: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with kaempferol
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-21
Authors: Wang, H., Shears, S.B.
PDB entry 6m8c: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with isorhamnetin
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-21
Authors: Wang, H., Shears, S.B.
PDB entry 6m8d: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with diosmetin
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-21
Authors: Wang, H., Shears, S.B.
PDB entry 6m8e: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with rhamnetin
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-21
Authors: Wang, H., Shears, S.B.
PDB entry 6m8f: Engineered sperm whale myoglobin-based carbene transferase
Classification: TRANSFERASE
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2018-08-21
Authors: Bacik, J.P., Ando, N., Fasan, R.
PDB entry 6m8h: Crystal Structure of the R208Q mutant of G(i) subunit alpha-1
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2018-08-21
Authors: Mascarenhas, R., Goossens, J., Leverson, B., Kothawala, S., Ballicora, M., Olsen, K., de freitas, D., Liu, D.
PDB entry 6m8m: PA14 sugar-binding domain from RTX adhesin
Classification: SUGAR BINDING PROTEIN
Source organism: Marinobacter hydrocarbonoclasticus ATCC 49840
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2018-08-22
Authors: Vance, T.D.R., Conroy, B., Davies, P.L.
PDB entry 6m8n: Endo-fucoidan hydrolase P5AFcnA from glycoside hydrolase family 107
Classification: HYDROLASE
Source organism: Psychromonas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-08-22
Authors: Boraston, A.B., Vickers, C.J., Abe, K., Salama-Alber, O.
PDB entry 6m8o: Crystal structure of the receiver domain of LytR from Staphylococcus aureus
Classification: SIGNALING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-08-22
Authors: Shala-Lawrence, A., Audette, G.F.
PDB entry 6m8p: Human ERAP1 bound to phosphinic pseudotripeptide inhibitor DG013
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2018-08-22
Authors: Maben, Z., Stern, L.J.
PDB entry 6m8q: Cleavage and Polyadenylation Specificity Factor Subunit 3 (CPSF3) in complex with NVP-LTM531
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2018-08-22
Authors: Weihofen, W.A., Salcius, M., Michaud, G.
PDB entry 6m8r: Crystal structure of the KCTD16 BTB domain in complex with GABAB2 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-08-22
Authors: Zheng, S., Kruse, A.C.
PDB entry 6m8s: Crystal structure of the KCTD12 H1 domain in complex with Gbeta1gamma2 subunits
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.71 Å
Deposited: 2018-08-22
Authors: Zheng, S., Kruse, A.C.
PDB entry 6m8t: Crystal structure of UbiX-like FMN prenyltransferase AF1214 from Archaeoglobus fulgidus, FMN complex
Classification: LYASE
Source organism: Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2018-08-22
Authors: Stogios, P.J., Skarina, T., Khusnutidnova, A., Wawrzak, Z., Yakunin, A.F., Savchenko, A.
PDB entry 6m8u: Crystal structure of UbiX-like FMN prenyltransferase AF1214 from Archaeoglobus fulgidus, prenylated-FMN complex
Classification: LYASE
Source organism: Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.221 Å
Deposited: 2018-08-22
Authors: Stogios, P.J., Skarina, T., Khusnutidinova, A., Wawrzak, Z., Yakunin, A.F., Savchenko, A.
PDB entry 6m8v: Crystal structure of UbiX-like FMN prenyltransferase MJ0101 from Methanocaldococcus jannaschii, FMN complex
Classification: LYASE
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.221 Å
Deposited: 2018-08-22
Authors: Stogios, P.J., Skarina, T., Khusnutdinova, A., Wawrzak, Z., Yakunin, A.F., Savchenko, A.
PDB entry 6m8w: PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR AIAF
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Pseudomonas sp. (strain 101); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2018-08-22
Authors: Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
PDB entry 6m8y: PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR AIPF
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Pseudomonas sp. (strain 101); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2018-08-22
Authors: Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
PDB entry 6m8z: Crystal structure of human DJ-1 without a modification on Cys-106
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-08-22
Authors: Shumilin, I.A., Shabalin, I.G., Shumilina, S.V., Werenskjold, C., Utepbergenov, D., Minor, W.
PDB entry 6m90: Monophosphorylated pSer33 b-Catenin peptide, b-TrCP/Skp1, NRX-2776 ternary complex
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-08-22
Authors: Simonetta, K.R., Clifton, M.C., Walter, R.L., Ranieri, G.M., Carter, J.J.
PDB entry 6m91: Monophosphorylated pSer33 b-Catenin peptide, b-TrCP/Skp1, NRX-103094 ternary complex
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-08-22
Authors: Simonetta, K.R., Clifton, M.C., Walter, R.L., Ranieri, G.M., Carter, J.J.
PDB entry 6m92: Monophosphorylated pSer33 b-Catenin peptide, b-TrCP/Skp1, NRX-2663 ternary complex
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2018-08-22
Authors: Simonetta, K.R., Clifton, M.C., Walter, R.L., Ranieri, G.M., Carter, J.J., Lee, S.J.
PDB entry 6m93: Monophosphorylated pSer33 b-Catenin peptide, b-TrCP/Skp1, NRX-1933 ternary complex
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-08-22
Authors: Simonetta, K.R., Clifton, M.C., Walter, R.L., Ranieri, G.M., Lee, S.J.
PDB entry 6m94: Monophosphorylated pSer33 b-Catenin peptide bound to b-TrCP/Skp1 Complex
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-08-22
Authors: Simonetta, K.R., Clifton, M.C., Walter, R.L., Ranieri, G.M., Carter, J.J.
PDB entry 6m95: Structure-based Design, Synthesis, and Biological Evaluation of Imidazo[4,5-b]pyridine-2-one based p38 MAP Kinase Inhibitors by scaffold hopping: compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-22
Authors: Lane, W., Okada, K.
PDB entry 6m96: ATP-bound conformation of the WzmWzt O antigen ABC transporter
Classification: MEMBRANE PROTEIN/TRANSPORT PROTEIN
Source organism: Aquifex aeolicus; Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-08-22
Authors: Caffalette, C.A., Zimmer, J.
PDB entry 6m97: Crystal structure of the high-affinity copper transporter Ctr1
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli; Salmo salar
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2018-08-22
Authors: Ren, F., Yuan, P.
PDB entry 6m98: Crystal structure of the high-affinity copper transporter Ctr1 in complex with Cu(I)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli; Salmo salar
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2018-08-22
Authors: Ren, F., Yuan, P.
PDB entry 6m99: In situ structure of transcriptional enzyme complex and asymmetric inner capsid protein of aquareovirus at primed state
Classification: VIRAL PROTEIN
Source organism: Grass carp reovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2018-08-23
Authors: Ding, K., Zhou, Z.H.
PDB entry 6m9a: Bordetella pertussis globin coupled sensor regulatory domain (BpeGReg)
Classification: SIGNALING PROTEIN
Source organism: Bordetella pertussis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-08-23
Authors: Rivera, S.R., Hoffer, E.D., Dunham, C.M., Weinert, E.E.
PDB entry 6m9b: Wild-type streptavidin in complex with biotin solved by native SAD with data collected at 6 keV
Classification: STRUCTURAL PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.548 Å
Deposited: 2018-08-23
Authors: Finke, A.D.
PDB entry 6m9c: PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR Pseudotyrostatin
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Pseudomonas sp. (strain 101); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-23
Authors: Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
PDB entry 6m9d: PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR Chymostatin
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Pseudomonas sp. (strain 101); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-23
Authors: Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
PDB entry 6m9f: PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR Tyrostatin
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Pseudomonas sp. (strain 101); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2018-08-23
Authors: Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
PDB entry 6m9g: BbvCI B2 dimer with Ta6Br14 clusters
Classification: HYDROLASE
Source organism: Brevibacillus brevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2018-08-23
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 6m9h: JAK2 JH2 in complex with diaminopyrimidine JAK040
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2018-08-23
Authors: Puleo, D.E., Schlessinger, J., Jorgensen, W.L.
PDB entry 6m9i: L-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 0.9 Å
Deposited: 2018-08-23
Authors: Zee, C., Glynn, C., Gallagher-Jones, M., Miao, J., Santiago, C.G., Cascio, D., Gonen, T., Sawaya, M.R., Rodriguez, J.A.
PDB entry 6m9j: Racemic-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 0.9 Å
Deposited: 2018-08-23
Authors: Zee, C., Glynn, C., Gallagher-Jones, M., Miao, J., Santiago, C.G., Cascio, D., Gonen, T., Sawaya, M.R., Rodriguez, J.A.
PDB entry 6m9k: Crystal structure of lambda exonuclease in complex with the Red beta C-terminal domain
Classification: HYDROLASE
Source organism: Escherichia phage lambda
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-08-23
Authors: Bell, C.E., Caldwell, B.J.
PDB entry 6m9l: Structure-based Design, Synthesis, and Biological Evaluation of Imidazo[4,5-b]pyridine-2-one based p38 MAP Kinase Inhibitors by scaffold hopping - compound 10
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2018-08-23
Authors: Lane, W., Okada, K.
PDB entry 6m9m: Streptococcus mutans AlkD2 bound to inosine-5'-monophosphate
Classification: UNKNOWN FUNCTION
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.401 Å
Deposited: 2018-08-23
Authors: Eichman, B.F., Shi, R.
PDB entry 6m9r: Crystal structure of SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 with a bound N(delta)-hydroxy-N(omega)-methyl-L-arginine intermediate
Classification: OXIDOREDUCTASE
Source organism: Streptomyces achromogenes subsp. streptozoticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2018-08-24
Authors: Rohac, R., Mitchell, A.J., Boal, A.K.
PDB entry 6m9s: Crystal structure of SeMet SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697
Classification: OXIDOREDUCTASE
Source organism: Streptomyces achromogenes subsp. streptozoticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2018-08-24
Authors: Rohac, R., Mitchell, A.J., Boal, A.K.
PDB entry 6m9t: Crystal structure of EP3 receptor bound to misoprostol-FA
Classification: MEMBRANE PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-08-24
Authors: Audet, M., White, K.L., Breton, B., Zarzycka, B., Han, G.W., Lu, Y., Gati, C., Batyuk, A., Popov, P., Velasquez, J., Manahan, D., Hu, H., Weierstall, U., Liu, W., Shui, W., Katrich, V., Cherezov, V., Hanson, M.A., Stevens, R.C.
PDB entry 6m9u: Structure of the apo-form of 20beta-Hydroxysteroid Dehydrogenase from Bifidobacterium adolescentis strain L2-32
Classification: OXIDOREDUCTASE
Source organism: Bifidobacterium adolescentis L2-32
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-08-24
Authors: Mythen, S.M., Pollet, R.M., Koropatkin, N.M., Ridlon, J.M.
PDB entry 6m9w: Structure of Mg-free KRAS4b (2-169) bound to GDP with the switch-I in fully open conformation
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-08-24
Authors: Dharmaiah, S., Tran, T.H., Yan, W., Simanshu, D.K.
PDB entry 6m9x: X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10A
Classification: FLUORESCENT PROTEIN
Source organism: Branchiostoma floridae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2018-08-24
Authors: Muslinkina, L., Pletneva, N., Pletnev, V., Pletnev, S.
PDB entry 6m9y: X-ray Structure of Branchiostoma floridae fluorescent protein lanFP6A
Classification: FLUORESCENT PROTEIN
Source organism: Branchiostoma floridae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2018-08-24
Authors: Muslinkina, L., Pletneva, N., Pletnev, V., Pletnev, S.
PDB entry 6m9z: X-ray Structure of Branchiostoma floridae fluorescent protein lanFP6G
Classification: FLUORESCENT PROTEIN
Source organism: Branchiostoma floridae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2018-08-24
Authors: Muslinkina, L., Pletneva, N., Pletnev, V., Pletnev, S.
PDB entry 6ma1: Crystal structure of human O-GlcNAc transferase bound to a peptide from HCF-1 pro-repeat 2 (11-26) and inhibitor 4a
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2018-08-25
Authors: Martin, S.E.S., Lazarus, M.B., Walker, S.
PDB entry 6ma2: Crystal structure of human O-GlcNAc transferase bound to a peptide from HCF-1 pro-repeat 2 (11-26) and inhibitor ent-1a
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-08-25
Authors: Martin, S.E.S., Lazarus, M.B., Walker, S.
PDB entry 6ma3: Crystal structure of human O-GlcNAc transferase bound to a peptide from HCF-1 pro-repeat 2 (11-26) and inhibitor 2a
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-25
Authors: Martin, S.E.S., Lazarus, M.B., Walker, S.
PDB entry 6ma4: Crystal structure of human O-GlcNAc transferase bound to a peptide from HCF-1 pro-repeat 2 (11-26) and inhibitor 3a
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-25
Authors: Martin, S.E.S., Lazarus, M.B., Walker, S.
PDB entry 6ma5: Crystal structure of human O-GlcNAc transferase bound to a peptide from HCF-1 pro-repeat 2 (11-26) and inhibitor 1a
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-25
Authors: Martin, S.E.S., Lazarus, M.B., Walker, S.
PDB entry 6ma6: Human CYP3A4 bound to an inhibitor metyrapone
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.182 Å
Deposited: 2018-08-26
Authors: Sevrioukova, I.F.
PDB entry 6ma7: Human CYP3A4 bound to an inhibitor fluconazole
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2018-08-26
Authors: Sevrioukova, I.F.
PDB entry 6ma8: Human CYP3A4 bound to PMSF
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-08-26
Authors: Sevrioukova, I.F.
PDB entry 6maa: WFIKKN2 Follistatin Domain
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.394 Å
Deposited: 2018-08-27
Authors: McCoy, J.C., Walker, R.G., Thomas, T.B.
PDB entry 6mab: 1.7A resolution structure of RsbU from Chlamydia trachomatis (periplasmic domain)
Classification: SIGNALING PROTEIN
Source organism: Chlamydia trachomatis serovar L2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-08-27
Authors: Dmitriev, A., Lovell, S., Battaile, K.P., Soules, K., Hefty, P.S.
PDB entry 6mac: Ternary structure of GDF11 bound to ActRIIB-ECD and Alk5-ECD
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2018-08-27
Authors: Goebel, E.J., Thompson, T.B.
PDB entry 6mae: CHAIN A. UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase PA-LPXC Complexed with (R)-3-((S)-3-(4-(cyclopropylethynyl)phenyl)-2-oxooxazolidin-5-yl)-N-hydroxy-2-methyl-2-(methylsulfonyl)propenamide
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-27
Authors: Shu, W.
PDB entry 6maf: native BbvCI A2B2 tetramer at low resolution
Classification: HYDROLASE
Source organism: Brevibacillus brevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.79 Å
Deposited: 2018-08-27
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 6mag: native BbvCI B2 dimer in space group C222
Classification: HYDROLASE
Source organism: Brevibacillus brevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2018-08-27
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 6mai: Crystal structure of Deoxyuridine 5'-triphosphate nucleotidohydrolase from Legionella pneumophila Philadelphia 1
Classification: HYDROLASE
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-27
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6maj: HBO1 is required for the maintenance of leukaemia stem cells
Classification: antitumor protein/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.139 Å
Deposited: 2018-08-27
Authors: Ren, B., Peat, T.S., Monahan, B., Dawson, M., Street, I.
PDB entry 6mak: HBO1 is required for the maintenance of leukaemia stem cells
Classification: antitumor protein/transferase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2018-08-27
Authors: Ren, B., Peat, T.S., Monahan, B., Dawson, M., Street, I.
PDB entry 6mal: Structure of human Nocturnin C-terminal domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-08-28
Authors: Estrella, M.A., Du, J., Korennykh, A.
PDB entry 6mam: Cleaved Ebola GP in complex with a broadly neutralizing human antibody, ADI-15946
Classification: Viral protein/immune system
Source organism: Homo sapiens; Zaire ebolavirus (strain Mayinga-76)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.1 Å
Deposited: 2018-08-28
Authors: West, B.R., Moyer, C.L., Fusco, M.L., Saphire, E.O.
PDB entry 6man: Crystal structure of a DnaN sliding clamp DNA polymerase III subunit beta from Rickettsia bellii RML369-C
Classification: TRANSCRIPTION
Source organism: Rickettsia bellii (strain RML369-C)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2018-08-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6mao: Crystal structure of Deoxyuridine 5'-triphosphate nucleotidohydrolase from Legionella pneumophila Philadelphia 1 in complex with dUMP (Deoxyuridine 5'-monophosphate)
Classification: HYDROLASE
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-08-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6map: F9 Pilus Adhesin FmlH Lectin Domain from E. coli UTI89 in Complex with Galactoside 5-nitro-2'-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-[1,1'-biphenyl]-3-carboxylic acid
Classification: sugar binding protein/inhibitor
Source organism: Escherichia coli UTI89
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2018-08-28
Authors: Klein, R.D., Hultgren, S.J.
PDB entry 6maq: F9 Pilus Adhesin FmlH Lectin Domain from E. coli UTI89 in Complex with Galactoside 2'-{[(2S,3R,4R,5R,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-5-nitro-[1,1'-biphenyl]-3-carboxylic acid
Classification: sugar binding protein/inhibitor
Source organism: Escherichia coli UTI89
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2018-08-28
Authors: Klein, R.D., Hultgren, S.J.
PDB entry 6mar: HIV-1 Envelope Glycoprotein Clone BG505 delCT N332T in complex with broadly neutralizing antibody Fab PGT151
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2018-08-28
Authors: Berndsen, Z.T., Ward, A.B.
PDB entry 6mas: X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10G
Classification: FLUORESCENT PROTEIN
Source organism: Branchiostoma floridae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2018-08-28
Authors: Muslinkina, L., Pletneva, N., Pletnev, V., Pletnev, S.
PDB entry 6mat: Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7
Classification: RIBOSOMAL PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719); Chaetomium thermophilum var. thermophilum DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2018-08-28
Authors: Lo, Y.H., Sobhany, M., Hsu, A.L., Ford, B.L., Krahn, J.M., Borgnia, M.J., Stanley, R.E.
PDB entry 6mau: Crystal structure of human BRD4(1) in complex with CN210 (compound 19)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2018-08-28
Authors: Nadupalli, A., Fontano, E., Connors, C.R., Chan, S.G., Olland, A.M., Lakshminarasimhan, D., White, A., Suto, R.K.
PDB entry 6mav: Complex of tissue inhibitor of metalloproteinase-1 (TIMP-1) mutant L34G with matrix metalloproteinase-3 catalytic domain (MMP-3cd)
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2018-08-28
Authors: Raeeszadeh-Sarmazdeh, M., Radisky, E.
PDB entry 6maw: F9 Pilus Adhesin FmlH Lectin Domain from E. coli UTI89 in Complex with Galactoside N-[(2S,3R,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-{[S-methyl-6-(trifluoromethyl)-[1,1'-biphenyl]-3'-yl]oxy}oxan-3-yl]acetamide
Classification: sugar binding protein/inhibitor
Source organism: Escherichia coli UTI89
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-08-28
Authors: Klein, R.D., Hultgren, S.J.
PDB entry 6max: Crystal structure of Ribonuclease P protein from Thermotoga maritima in complex with purpurin
Classification: RNA BINDING PROTEIN, HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2018-08-28
Authors: Torres-Larios, A., Madrigal-Carrillo, E.A.
PDB entry 6may: Crystal structure of N-myristoyl transferase (NMT) G386E mutant from Plasmodium vivax
Classification: TRANSFERASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-08-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6maz: Crystal structure of N-myristoyl transferase (NMT) G386E mutant from Plasmodium vivax in complex with inhibitor IMP-0366
Classification: TRANSFERASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-08-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6mb0: Crystal structure of N-myristoyl transferase (NMT) G386E mutant from Plasmodium vivax in complex with inhibitor IMP-1002
Classification: TRANSFERASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-08-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6mb1: Crystal structure of N-myristoyl transferase (NMT) from Plasmodium vivax in complex with inhibitor IMP-1002
Classification: TRANSFERASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-08-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6mb2: Cryo-EM structure of the PYD filament of AIM2
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2018-08-29
Authors: Lu, A., Li, Y., Wu, H.
PDB entry 6mb3: Cryo-EM structure of the circumsporozoite protein of Plasmodium falciparum with a vaccine-elicited antibody reveals maturation of inter-antibody contacts
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2018-08-29
Authors: Cottrell, C.A., Torres, J.L., Ward, A.B.
PDB entry 6mb4: Binary (sisomicin) structure of AAC-IIIb
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.302 Å
Deposited: 2018-08-29
Authors: Cuneo, M.J., Kumar, P.
PDB entry 6mb5: AAC-IIIb binary with NEOMYCIN
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-08-29
Authors: Cuneo, M.J., Kumar, P.
PDB entry 6mb6: AAC-IIIb binary with CoASH
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2018-08-29
Authors: Cuneo, M.J., Kumar, P.
PDB entry 6mb7: Binary (paromomycin) structure of AAC-IIIb
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-08-29
Authors: Cuneo, M.J., Kumar, P.
PDB entry 6mb8: Apo structure of AAC-IIIb
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-08-29
Authors: Cuneo, M.J., Kumar, P.
PDB entry 6mb9: Ternary (neomycin/CoA) structure of AAC-IIIb
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-08-29
Authors: Cuneo, M.J., Kumar, P.
PDB entry 6mba: Crystal Structure of Human Nav1.4 CTerminal Domain in Complex with apo Calmodulin
Classification: CALMODULIN-BINDING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2018-08-29
Authors: Yoder, J., Gabelli, S.B., Amzel, L.M.
PDB entry 6mbb: Human Bfl-1 in complex with the designed peptide dF1
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2018-08-29
Authors: Jenson, J.M., Keating, A.E.
PDB entry 6mbc: Human Bfl-1 in complex with the designed peptide dF4
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.752 Å
Deposited: 2018-08-29
Authors: Jenson, J.M., Keating, A.E.
PDB entry 6mbd: Human Mcl-1 in complex with the designed peptide dM1
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-08-29
Authors: Jenson, J.M., Keating, A.E.
PDB entry 6mbe: Human Mcl-1 in complex with the designed peptide dM7
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2018-08-29
Authors: Jenson, J.M., Keating, A.E.
PDB entry 6mbf: GphF Dehydratase 1
Classification: LYASE
Source organism: Archangium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.543 Å
Deposited: 2018-08-29
Authors: Dodge, G.J., Smith, J.L.
PDB entry 6mbg: GphF Dehydratase P1711L variant for improved crystallization
Classification: LYASE
Source organism: Archangium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.852 Å
Deposited: 2018-08-29
Authors: Dodge, G.J., Smith, J.L.
PDB entry 6mbh: GphF DH1 P1711L, L1744P variant: An isomerase-inactive variant of GphF DH1
Classification: LYASE
Source organism: Archangium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-08-29
Authors: Dodge, G.J., Smith, J.L.
PDB entry 6mbi: Crystal Structure of SNX15 PX domain in domain swapped conformation form 2
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.834 Å
Deposited: 2018-08-29
Authors: Chandra, M., Collins, B.M.
PDB entry 6mbj: SETD3, a Histidine Methyltransferase, in Complex with an Actin Peptide and SAH, P21 Crystal Form
Classification: TRANSFERASE/STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2018-08-30
Authors: Horton, J.R., Dai, S., Cheng, X.
PDB entry 6mbk: SETD3, a Histidine Methyltransferase, in Complex with an Actin Peptide and SAH, First P212121 Crystal Form
Classification: TRANSFERASE/STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2018-08-30
Authors: Horton, J.R., Dai, S., Cheng, X.
PDB entry 6mbl: SETD3, a Histidine Methyltransferase, in Complex with an Actin Peptide and SAH, Second P212121 Crystal Form
Classification: TRANSFERASE/STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.197 Å
Deposited: 2018-08-30
Authors: Horton, J.R., Dai, S., Cheng, X.
PDB entry 6mbm: HS02 - Intragenic antimicrobial peptides derived from the protein unconventional myosin 1h
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2018-08-30
Authors: Santos, M.A., Brand, G.D., Oliveira, A.L.
PDB entry 6mbn: LptB E163Q in complex with ATP
Classification: LIPID TRANSPORT
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.957 Å
Deposited: 2018-08-30
Authors: Owens, T.W., Ruiz, N., Kahne, D.
PDB entry 6mbo: GLP Methyltransferase with Inhibitor EML741-P212121 Crystal Form
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.591 Å
Deposited: 2018-08-30
Authors: Horton, J.R., Cheng, X.
PDB entry 6mbp: GLP Methyltransferase with Inhibitor EML741- P3121 Crystal Form
Classification: TRANSFERASE/TRANSFERASE INHBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.947 Å
Deposited: 2018-08-30
Authors: Horton, J.R., Cheng, X.
PDB entry 6mbq: Crystal structure of Mg-free wild-type KRAS (2-166) bound to GMPPNP in the state 1 conformation
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2018-08-30
Authors: Dharmaiah, S., Davies, D.R., Abendroth, J., Gillette, W.G., Stephen, A.G., Simanshu, D.K.
PDB entry 6mbt: Crystal structure of wild-type KRAS bound to GDP and Mg (Space group C2)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2018-08-30
Authors: Dharmaiah, S., Tran, T.H., Yan, W., Simanshu, D.K.
PDB entry 6mbu: Crystal structure of wild-type KRAS (1-169) bound to GDP and Mg (Space group P3)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2018-08-30
Authors: Dharmaiah, S., Tran, T.H., Yan, W., Simanshu, D.K.
PDB entry 6mbv: Carbonic Anhydrase II in complex with Nicotinic Acid
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.695 Å
Deposited: 2018-08-30
Authors: Lomelino, C.L., McKenna, R.
PDB entry 6mbw: Structure of Transcription Factor
Classification: TRANSCRIPTION ACTIVATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2018-08-30
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 6mbx: CRYSTAL STRUCTURE OF MUSKMELON ALLERGEN CUC M 2
Classification: ALLERGEN
Source organism: Cucumis melo
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-08-30
Authors: Kapingidza, A.B., Hyduke, N.P., Chruszcz, M.
PDB entry 6mby: Carbonic Anhydrase II in complex with Ferulic Acid
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.496 Å
Deposited: 2018-08-30
Authors: Lomelino, C.L., McKenna, R.
PDB entry 6mbz: Structure of Transcription Factor
Classification: TRANSCRIPTION ACTIVATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2018-08-30
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 6mc0: Crystal Structure of Ribose-5-phosphate Isomerase from Legionella pneumophila with Bound Substrate Ribose-5-Phosphate and Product Ribulose-5-Phosphate
Classification: ISOMERASE
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6mc1: Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethyl-1-((9-(methylthio)-5,6-dihydrothieno[3,4-h]quinazolin-2-yl)thio)butan-2-one, an allosteric inhibitor
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-08-30
Authors: Gannam, Z.T.K., Anderson, K.S., Bennett, A.M., Lolis, E.
PDB entry 6mc2: Crystal structure of a tetrameric DNA fold-back quadruplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2018-08-30
Authors: Chu, B., Paukstelis, P.J.
PDB entry 6mc3: Crystal structure of a tetrameric DNA fold-back quadruplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2018-08-30
Authors: Chu, B., Paukstelis, P.J.
PDB entry 6mc4: Crystal structure of a tetrameric DNA fold-back quadruplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2018-08-30
Authors: Chu, B., Paukstelis, P.J.
PDB entry 6mc6: Crystal structure of PprA filament from Deinococcus radiodurans
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.747 Å
Deposited: 2018-08-30
Authors: Szabla, R., Junop, M.S., Wood, K.
PDB entry 6mc8: Crystal structure of PprA dimer from Deinococcus deserti
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-08-30
Authors: Szabla, R., Junop, M.S., Rok, M.
PDB entry 6mc9: Crystal Structure of Human Nav1.4 C-Terminal (1599-1754) domain in complex with calcium-bound calmodulin
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2018-08-30
Authors: Yoder, J.B., Gabelli, S.B., Amzel, L.M.
PDB entry 6mca: Structure of Legionella Effector AnkH
Classification: CELL INVASION
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.455 Å
Deposited: 2018-08-30
Authors: Cygler, M., Chung, I.Y.W.
PDB entry 6mcb: CryoEM structure of AcrIIA2 in complex with CRISPR-Cas9
Classification: HYDROLASE/RNA/VIRAL PROTEIN
Source organism: Listeria phage LP-101; Streptococcus pyogenes M1 GAS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2018-08-31
Authors: Jiang, F., Liu, J.J., Doudna, J.A.
PDB entry 6mcc: CryoEM structure of AcrIIA2 homolog in complex with CRISPR-Cas9
Classification: HYDROLASE/RNA/VIRAL PROTEIN
Source organism: Listeria phage LP-101; Streptococcus pyogenes M1 GAS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2018-08-31
Authors: Jiang, F., Liu, J.J., Doudna, J.A.
PDB entry 6mcd: Crystal Structure of tris-thiolate Pb(II) complex with adjacent water in a de novo Three Stranded Coiled Coil Peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-08-31
Authors: Tolbert, A.E., Ruckthong, L., Stuckey, J.A., Pecoraro, V.L.
PDB entry 6mce: Solution structure of HIV-1 TAR with Tat RNA Binding Domain
Classification: TRANSCRIPTION
Experimental method: SOLUTION NMR
Deposited: 2018-08-31
Authors: Pham, V.V., D'Souza, V.M.
PDB entry 6mcf: Solution structure of 7SK stem-loop 1 with HIV-1 Tat RNA Binding Domain
Classification: TRANSCRIPTION
Experimental method: SOLUTION NMR
Deposited: 2018-08-31
Authors: Pham, V.V., D'Souza, V.M.