LiteFold/PDB huggingface dataset:
PDB entry 4kcu: Pyruvate kinase (PYK) from Trypanosoma brucei soaked with D-Malate
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-04-24
Authors: Zhong, W., Morgan, H.P., McNae, I.W., Michels, P.A.M., Fothergill-Gilmore, L.A., Walkinshaw, M.D.
PDB entry 4kcv: Pyruvate kinase (PYK) from Trypanosoma brucei soaked with 2-oxoglutaric acid
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2013-04-24
Authors: Zhong, W., Morgan, H.P., McNae, I.W., Michels, P.A.M., Fothergill-Gilmore, L.A., Walkinshaw, M.D.
PDB entry 4kcw: Pyruvate kinase (PYK) from Trypanosoma brucei soaked with oxalate
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-04-24
Authors: Zhong, W., Morgan, H.P., McNae, I.W., Michels, P.A.M., Fothergill-Gilmore, L.A., Walkinshaw, M.D.
PDB entry 4kcx: BRDT in complex with Dinaciclib
Classification: Cell Cycle/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-24
Authors: Martin, M.P., Schonbrunn, E.
PDB entry 4kd1: CDK2 in complex with Dinaciclib
Classification: Cell Cycle/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-04-24
Authors: Martin, M.P., Schonbrunn, E.
PDB entry 4kd3: Crystal structure of Staphylococcal nuclease variant Delta+PHS L25A/V66A/I92A at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-04-24
Authors: Caro, J.A., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4kd4: Crystal structure of Staphylococcal nuclease variant V23L/L25V/V66I/I72V at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-04-24
Authors: Caro, J.A., Flores, E., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4kd5: substrate binding domain of putative molybdenum ABC transporter from Clostridium difficile
Classification: TRANSPORT PROTEIN
Source organism: Clostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4999 Å
Deposited: 2013-04-24
Authors: Maltseva, N., Kim, Y., Grimshaw, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4kd6: Crystal structure of a Enoyl-CoA hydratase/isomerase from Burkholderia graminis C4D1M
Classification: ISOMERASE
Source organism: Burkholderia graminis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-04-24
Authors: Kumaran, D., Chamala, S., Evans, B., Foti, R., Gizzi, A., Hillerich, B., Kar, A., Lafleur, J., Seidel, R., Villigas, G., Zencheck, W., Al Obaidi, N., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4kd7: Human dihydrofolate reductase complexed with NADPH and 5-{3-[3-methoxy-5(pyridine-4-yl)phenyl]prop-1-yn-1-yl}-6-ethyl-pyrimidine-2,4-diamine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.715 Å
Deposited: 2013-04-24
Authors: Lamb, K.M., Anderson, A.C.
PDB entry 4kdc: Crystal Structure of UBIG
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2013-04-24
Authors: Zhu, Y., Teng, M., Li, X.
PDB entry 4kdd: Structure of Mycobacterium tuberculosis ribosome recycling factor in presence of detergent
Classification: TRANSLATION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-24
Authors: Selvaraj, M., Govindan, A., Seshadri, A., Dubey, B., Varshney, U., Vijayan, M.
PDB entry 4kde: Crystal Structure of the Apo Form of Thermus thermophilus Malate Dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.798 Å
Deposited: 2013-04-25
Authors: Hsu, C.-H., Hong, C.-H., Chang, Y.-Y.
PDB entry 4kdf: Crystal Structure of Thermus thermophilus Malate Dehydrogenase in Complex with NAD
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.356 Å
Deposited: 2013-04-25
Authors: Hsu, C.-H., Hong, C.-H., Chang, Y.-Y.
PDB entry 4kdi: Crystal structure of p97/VCP N in complex with OTU1 UBXL
Classification: SIGNALING PROTEIN/HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2013-04-25
Authors: Kim, S.J., Kim, E.E.
PDB entry 4kdl: Crystal structure of p97/VCP N in complex with OTU1 UBXL
Classification: SIGNALING PROTEIN/HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2013-04-25
Authors: Kim, S.J., Kim, E.E.
PDB entry 4kdm: Crystal structure of the hemagglutinin of ferret-transmissible H5N1 virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus; influenza virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.496 Å
Deposited: 2013-04-25
Authors: Lu, X., Shi, Y., Zhang, W., Zhang, Y., Qi, J., Gao, G.F.
PDB entry 4kdn: Crystal structure of the hemagglutinin of ferret-transmissible H5N1 virus in complex with avian receptor analog LSTa
Classification: VIRAL PROTEIN
Source organism: Influenza A virus; influenza virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.483 Å
Deposited: 2013-04-25
Authors: Lu, X., Shi, Y., Zhang, W., Zhang, Y., Qi, J., Gao, G.F.
PDB entry 4kdo: Crystal structure of the hemagglutinin of ferret-transmissible H5N1 virus in complex with human receptor analog LSTc
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.396 Å
Deposited: 2013-04-25
Authors: Lu, X., Shi, Y., Zhang, W., Zhang, Y., Qi, J., Gao, G.F.
PDB entry 4kdp: TcaR-ssDNA complex crystal structure reveals the novel ssDNA binding mechanism of the MarR family proteins
Classification: TRANSCRIPTION/DNA
Source organism: Staphylococcus epidermidis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2013-04-25
Authors: Chang, Y.M., Chen, C.K.-M., Wang, A.H.-J.
PDB entry 4kdq: Crystal structure of the hemagglutinin of A/Xinjiang/1/2006 virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.604 Å
Deposited: 2013-04-25
Authors: Lu, X., Shi, Y., Zhang, W., Zhang, Y., Qi, J., Gao, G.F.
PDB entry 4kdr: Crystal Structure of UBIG/SAH complex
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.003 Å
Deposited: 2013-04-25
Authors: Zhu, Y., Teng, M., Li, X.
PDB entry 4kds: Crystal structure of latent rainbow trout plasminogen activator inhibitor 1 (PAI-1)
Classification: HYDROLASE INHIBITOR
Source organism: Oncorhynchus mykiss
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6682 Å
Deposited: 2013-04-25
Authors: Johansen, J.S.
PDB entry 4kdt: Structure of an early native-like intermediate of beta2-microglobulin amyloidosis
Classification: IMMUNE SYSTEM
Source organism: Camelidae; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-04-25
Authors: Vanderhaegen, S., Fislage, M., Pardon, E., Versees, W., Steyaert, J.
PDB entry 4kdu: Crystal structure of a glutathione transferase family member from Burkholderia graminis, target efi-507264, no gsh, ordered domains, space group P21, form(1)
Classification: TRANSFERASE
Source organism: Burkholderia graminis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-25
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4kdv: Crystal structure of a bacterial immunoglobulin-like domain from the M. primoryensis ice-binding adhesin
Classification: CELL ADHESION
Source organism: Marinomonas primoryensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2013-04-25
Authors: Guo, S., Garnham, C.P., Karunan, S.P., Campbell, R.L., Allingham, J.S., Davies, P.L.
PDB entry 4kdw: Crystal structure of a bacterial immunoglobulin-like domain from the M. primoryensis ice-binding adhesin
Classification: CELL ADHESION
Source organism: Marinomonas primoryensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-04-25
Authors: Guo, S., Garnham, C.P., Karunan, S.P., Campbell, R.L., Allingham, J.S., Davies, P.L.
PDB entry 4kdx: Crystal structure of a glutathione transferase family member from burkholderia graminis, target efi-507264, bound gsh, ordered domains, space group p21, form(1)
Classification: TRANSFERASE
Source organism: Burkholderia graminis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-04-25
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4kdy: Crystal structure of maleylacetoacetate isomerase from Anaeromyxobacter dehalogenans 2CP-1, Target EFI-507175, with bound GSH in the active site
Classification: ISOMERASE
Source organism: Anaeromyxobacter dehalogenans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-25
Authors: Kim, J., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Stead, M., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4kdz: Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2013-04-25
Authors: Kim, J., Toro, R., Bhosle, R., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4ke0: Crystal structure of BACE1 in complex with hydroxyethylamine-macrocyclic inhibitor 13
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-04-25
Authors: Whittington, D.A., Long, A.M., Li, V.
PDB entry 4ke1: Crystal structure of BACE1 in complex with hydroxyethylamine-macrocyclic inhibitor 19
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2013-04-25
Authors: Whittington, D.A., Long, A.M., Li, V.
PDB entry 4ke2: Crystal structure of the hyperactive Type I antifreeze from winter flounder
Classification: ANTIFREEZE PROTEIN
Source organism: Pseudopleuronectes americanus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-25
Authors: Sun, T., Lin, F.-H., Campbell, R.L., Allingham, J.S., Davies, P.L.
PDB entry 4ke3: Crystal structure of a glutathione transferase family member from Burkholderia graminis, target efi-507264, no gsh, disordered domains, space group P21, form(2)
Classification: TRANSFERASE
Source organism: Burkholderia graminis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-25
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4ke4: Elucidation of the structure and reaction mechanism of Sorghum bicolor hydroxycinnamoyltransferase and its structural relationship to other CoA-dependent transferases and synthases
Classification: TRANSFERASE
Source organism: Sorghum bicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.012 Å
Deposited: 2013-04-25
Authors: Walker, A.M., Hayes, R.P., Youn, B., Vermerris, W., Sattler, S.E., Kang, C.
PDB entry 4ke5: HCV NS5B GT1B N316Y with GSK5852
Classification: REPLICATION/REPLICATION INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2013-04-25
Authors: Williams, S.P., Kahler, K.M., Shotwell, J.B.
PDB entry 4ke6: Crystal structure D196N mutant of Monoglyceride lipase from Bacillus sp. H257 in complex with 1-rac-lauroyl glycerol
Classification: HYDROLASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-04-25
Authors: Rengachari, S., Aschauer, P., Gruber, K., Dreveny, I., Oberer, M.
PDB entry 4ke7: Crystal structure of Monoglyceride lipase from Bacillus sp. H257 in complex with an 1-myristoyl glycerol analogue
Classification: HYDROLASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.699 Å
Deposited: 2013-04-25
Authors: Rengachari, S., Aschauer, P., Gruber, K., Dreveny, I., Oberer, M.
PDB entry 4ke8: Crystal structure of Monoglyceride lipase from Bacillus sp. H257 in complex with monopalmitoyl glycerol analogue
Classification: HYDROLASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-04-25
Authors: Rengachari, S., Aschauer, P., Gruber, K., Dreveny, I., Oberer, M.
PDB entry 4ke9: Crystal structure of Monoglyceride lipase from Bacillus sp. H257 in complex with an 1-stearyol glycerol analogue
Classification: HYDROLASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-25
Authors: Rengachari, S., Aschauer, P., Gruber, K., Dreveny, I., Oberer, M.
PDB entry 4kea: Crystal structure of D196N mutant of Monoglyceride lipase from Bacillus sp. H257 in space group P212121
Classification: HYDROLASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-04-25
Authors: Rengachari, S., Aschauer, P., Gruber, K., Dreveny, I., Oberer, M.
PDB entry 4keb: Human dihydrofolate reductase complexed with NADPH and 5-{3-[3-methoxy-5-(isoquin-5-yl)phenyl]but-1-yn-1-yl}6-ethylpyrimidine-2,4-diamine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2013-04-25
Authors: Lamb, K.M., Anderson, A.C.
PDB entry 4kec: SbHCT-complex form
Classification: TRANSFERASE
Source organism: Sorghum bicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-25
Authors: Walker, A.M., Hayes, R.P., Youn, B., Vermerris, W., Sattler, S.E., Kang, C.
PDB entry 4ked: Crystal Structure of Cofilin Mutant (cof1-157p)
Classification: Actin Binding Protein
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2013-04-25
Authors: Kish-Trier, E., Haarer, B., Cingolani, G., Amberg, D.C.
PDB entry 4kee: Crystal Structure of Cofilin Mutant (cof1-158p)
Classification: Actin Binding Protein
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.448 Å
Deposited: 2013-04-25
Authors: Kish-Trier, E., Haarer, B., Cingolani, G., Amberg, D.C.
PDB entry 4kef: Structure of Cofilin Mutant (cof1-159p)
Classification: Actin Binding Protein
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.098 Å
Deposited: 2013-04-25
Authors: Kish-Trier, E., Haarer, B., Cingolani, G., Amberg, D.C.
PDB entry 4keg: Crystal Structure of MBP Fused Human SPLUNC1
Classification: LIPID BINDING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-04-25
Authors: Ning, F., Wang, C., Niu, L., Chu, H.W., Zhang, G.
PDB entry 4keh: Crosslinked Crystal Structure of Type II Fatty Synthase Dehydratase, FabA, and Acyl Carrier Protein, AcpP
Classification: ISOMERASE/BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2013-04-25
Authors: Nguyen, C., Haushalter, R., Finzel, K., Leong, J., Le, B.C., Burkart, M., Tsai, S.C.
PDB entry 4kei: Crystal structure of mouse Ryanodine Receptor 2 (1-217) disease mutant P164S
Classification: METAL TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.406 Å
Deposited: 2013-04-25
Authors: Kimlicka, L., Van Petegem, F.
PDB entry 4kej: Crystal structure of mouse Ryanodine Receptor 2 (1-217) disease mutant R169Q
Classification: METAL TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.553 Å
Deposited: 2013-04-25
Authors: Kimlicka, L., Van Petegem, F.
PDB entry 4kek: Crystal structure of mouse Ryanodine Receptor 2 (1-217) disease mutant R176Q
Classification: METAL TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.146 Å
Deposited: 2013-04-25
Authors: Kimlicka, L., Van Petegem, F.
PDB entry 4kel: Atomic resolution crystal structure of Kallikrein-Related Peptidase 4 complexed with a modified SFTI inhibitor FCQR(N)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.148 Å
Deposited: 2013-04-25
Authors: Ilyichova, O.V., Swedberg, J.E., de Veer, S.J., Sit, K.C., Harris, J.M., Buckle, A.M.
PDB entry 4kem: Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site
Classification: LYASE
Source organism: Azospirillum sp. B510
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-04-25
Authors: Vetting, M.W., Wichelecki, D., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4ken: Crystal Structure of AmpC beta-lactamase N152G Mutant in Complex with Cefoxitin
Classification: Hydrolase/Antibiotic
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2013-04-25
Authors: Docter, B.E., Baggett, V.L., Powers, R.A., Wallar, B.J.
PDB entry 4kep: Crystal structure of 4-pyridoxolactonase, wild-type
Classification: HYDROLASE
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2013-04-26
Authors: Kobayashi, J., Yoshikane, Y., Baba, S., Mizutani, K., Takahashi, N., Mikami, B., Yagi, T.
PDB entry 4keq: Crystal structure of 4-pyridoxolactonase, 5-pyridoxolactone bound
Classification: HYDROLASE
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.279 Å
Deposited: 2013-04-26
Authors: Kobayashi, J., Yoshikane, Y., Baba, S., Mizutani, K., Takahashi, N., Mikami, B., Yagi, T.
PDB entry 4ker: Crystal structure of SsoPox W263V
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-04-26
Authors: Gotthard, G., Hiblot, J., Chabriere, E., Elias, M.
PDB entry 4kes: Crystal structure of SsoPox W263T
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-26
Authors: Gotthard, G., Hiblot, J., Chabriere, E., Elias, M.
PDB entry 4ket: Crystal structure of SsoPox W263I
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-26
Authors: Gotthard, G., Hiblot, J., Chabriere, E., Elias, M.
PDB entry 4keu: Crystal structure of SsoPox W263M
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-26
Authors: Gotthard, G., Hiblot, J., Chabriere, E., Elias, M.
PDB entry 4kev: Crystal structure of SsoPox W263L
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2013-04-26
Authors: Gotthard, G., Hiblot, J., Chabriere, E., Elias, M.
PDB entry 4kew: structure of the A82F BM3 heme domain in complex with omeprazole
Classification: Oxidoreductase/Oxidoreductase inhibitor
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2013-04-26
Authors: Leys, D.
PDB entry 4kex: Crystal structure analysis of a single amino acid deletion mutation in EGFP
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-26
Authors: Arpino, J.A.J., Rizkallah, P.J.
PDB entry 4key: Structure of P450 BM3 A82F F87V in complex with omeprazole
Classification: Oxidoreductase/Oxidoreductase inhibitor
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-04-26
Authors: Leys, D.
PDB entry 4kez: Crystal structure of SsoPox W263F
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-04-26
Authors: Gotthard, G., Hiblot, J., Chabriere, E., Elias, M.
PDB entry 4kf0: Structure of the A82F P450 BM3 heme domain
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2013-04-26
Authors: Leys, D.
PDB entry 4kf1: Crystal structure of SsoPox W263I in complex with C10HTL
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-26
Authors: Gotthard, G., Hiblot, J., Chabriere, E., Elias, M.
PDB entry 4kf2: Structure of the P4509 BM3 A82F F87V heme domain
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2013-04-26
Authors: Leys, D.
PDB entry 4kf3: Crystal Structure of Myotoxin II (MjTX-II), a myotoxic Lys49-phospholipase A2 from Bothrops moojeni.
Classification: TOXIN
Source organism: Bothrops moojeni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2013-04-26
Authors: Salvador, G.H.M., dos Santos, J.I., Fontes, M.R.M.
PDB entry 4kf4: Crystal Structure of sfCherry
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.994 Å
Deposited: 2013-04-26
Authors: Nguyen, H.B., Hung, L.-W., Yeates, T.O., Waldo, G.S., Terwilliger, T.C.
PDB entry 4kf5: Crystal Structure of Split GFP complexed with engineered sfCherry with an insertion of GFP fragment
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.599 Å
Deposited: 2013-04-26
Authors: Nguyen, H.B., Hung, L.-W., Yeates, T.O., Waldo, G.S., Terwilliger, T.C.
PDB entry 4kf6: Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 8:0 Ceramide-1-Phosphate (8:0-C1P)
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.195 Å
Deposited: 2013-04-26
Authors: Simanshu, D.K., Brown, R.E., Patel, D.J.
PDB entry 4kf7: Nup188(aa1-1160) from Myceliophthora thermophila
Classification: STRUCTURAL PROTEIN
Source organism: Myceliophthora thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2013-04-26
Authors: Schwartz, T.U., Andersen, K.R.
PDB entry 4kf8: Nup188(aa1445-1827) from Myceliophthora thermophila
Classification: STRUCTURAL PROTEIN
Source organism: Myceliophthora thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-04-26
Authors: Schwartz, T.U., Andersen, K.R.
PDB entry 4kf9: Crystal structure of a glutathione transferase family member from ralstonia solanacearum, target efi-501780, with bound gsh coordinated to a zinc ion, ordered active site
Classification: TRANSFERASE
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-04-26
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4kfa: Crystal structure of human farnesyl pyrophosphate synthase (t201a mutant) complexed with mg and zoledronate
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2013-04-26
Authors: Barnett, B.L., Tsoumpra, M.K., Muniz, J.R.C., Walter, R.L.
PDB entry 4kfb: HIV-1 reverse transcriptase with bound fragment at NNRTI adjacent site
Classification: transferase/transferase inhibitor
Source organism: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.854 Å
Deposited: 2013-04-26
Authors: Bauman, J.D., Patel, D., Arnold, E.
PDB entry 4kfc: Crystal structure of a hyperactive mutant of response regulator KdpE complexed to its promoter DNA
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2013-04-26
Authors: Kumar, S., Narayanan, A., Yernool, D.A.
PDB entry 4kfd: Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 6.0
Classification: OXIDOREDUCTASE
Source organism: Ogataea angusta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2013-04-26
Authors: Johnson, B.J., Yukl, E.T., Klema, V.J., Wilmot, C.M.
PDB entry 4kfe: Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 7.0
Classification: OXIDOREDUCTASE
Source organism: Ogataea angusta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-26
Authors: Johnson, B.J., Yukl, E.T., Klema, V.J., Wilmot, C.M.
PDB entry 4kff: Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 8.5
Classification: OXIDOREDUCTASE
Source organism: Ogataea angusta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-04-26
Authors: Johnson, B.J., Yukl, E.T., Klema, V.J., Wilmot, C.M.
PDB entry 4kfg: The DNA Gyrase B ATP binding domain of Escherichia coli in complex with a small molecule inhibitor.
Classification: ISOMERASE/ISOMERASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-26
Authors: Bensen, D.C., Akers-Rodriguez, S., Lam, T., Tari, L.W.
PDB entry 4kfj: Human dihydrofolate reductase complexed with NADPH and 5-{3-[3-methoxy-5-(isoquin-5-yl)phenyl]prop-1-yn-1-yl}6-ethylprimidine-2,4-diamine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2013-04-26
Authors: Lamb, K.M., Anderson, A.C.
PDB entry 4kfm: Crystal structure of the G protein-gated inward rectifier K+ channel GIRK2 (Kir3.2) in complex with the beta-gamma G protein subunits
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2013-04-27
Authors: Whorton, M.R., MacKinnon, R.
PDB entry 4kfn: Structure-Based Discovery of Novel Amide-Containing Nicotinamide Phosphoribosyltransferase (Nampt) Inhibitors
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-27
Authors: Zheng, X., Bauer, P., Baumeister, T., Buckmelter, A.J., Caligiuri, M., Clodfelter, K.H., Han, B., Ho, Y., Kley, N., Lin, J., Reynolds, D.J., Sharma, G., Smith, C.C., Wang, Z., Dragovich, P.S., Gunzner-Toste, J., Liederer, B.M., Ly, J., O'Brien, T., Oh, A., Wang, L., Wang, W., Xiao, Y., Zak, M., Zhao, G., Yuen, P., Bair, K.W.
PDB entry 4kfo: Structure-Based Discovery of Novel Amide-Containing Nicotinamide Phosphoribosyltransferase (Nampt) Inhibitors
Classification: Transferase/transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-27
Authors: Zheng, X., Bauer, P., Baumeister, T., Buckmelter, A.J., Caligiuri, M., Clodfelter, K.H., Han, B., Ho, Y., Kley, N., Lin, J., Reynolds, D.J., Sharma, G., Smith, C.C., Wang, Z., Dragovich, P.S., Gunzner-Tosteb, J., Liederer, B.M., Ly, J., O'Brien, T., Oh, A., Wang, L., Wang, W., Xiao, Y., Zak, M., Zhao, G., Yuen, P., Bair, K.W.
PDB entry 4kfp: Identification of 2,3-dihydro-1H-pyrrolo[3,4-c]pyridine-derived Ureas as Potent Inhibitors of Human Nicotinamide Phosphoribosyltransferase (NAMPT)
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2013-04-27
Authors: Dragovich, P.S., Bair, K.W., Baumeister, T., Ho, Y., Liederer, B.M., Liu, X., O'Brien, T., Oeh, J., Sampath, D., Skelton, N., Wang, L., Wang, W., Wu, H., Xiao, Y., Yuen, P., Zak, M., Zhang, L., Zheng, X.
PDB entry 4kfq: Crystal structure of the NMDA receptor GluN1 ligand binding domain in complex with 1-thioxo-1,2-dihydro-[1,2,4]triazolo[4,3-a]quinoxalin-4(5H)-one
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-27
Authors: Steffensen, T.B., Tabrizi, F.M., Gajhede, M., Kastrup, J.S.
PDB entry 4kfr: Structure of the genome packaging NTPase B204 from Sulfolobus turreted icosahedral virus 2 in complex with sulfate
Classification: HYDROLASE
Source organism: Sulfolobus turreted icosahedral virus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.956 Å
Deposited: 2013-04-27
Authors: Happonen, L.J., Oksanen, E., Goldman, A., Kajander, T., Butcher, S.
PDB entry 4kfs: Structure of the genome packaging NTPase B204 from Sulfolobus turreted icosahedral virus 2 in complex with AMP
Classification: HYDROLASE
Source organism: Sulfolobus turreted icosahedral virus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.946 Å
Deposited: 2013-04-27
Authors: Happonen, L.J., Oksanen, E., Kajander, T., Goldman, A., Butcher, S.
PDB entry 4kft: Structure of the genome packaging NTPase B204 from Sulfolobus turreted icosahedral virus 2 in complex with ATP-gammaS
Classification: HYDROLASE
Source organism: Sulfolobus turreted icosahedral virus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.241 Å
Deposited: 2013-04-27
Authors: Happonen, L.J., Oksanen, E., Kajander, T., Goldman, A., Butcher, S.
PDB entry 4kfu: Structure of the genome packaging NTPase B204 from Sulfolobus turreted icosahedral virus 2 in complex with AMPPCP
Classification: HYDROLASE
Source organism: Sulfolobus turreted icosahedral virus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2013-04-27
Authors: Happonen, L.J., Oksanen, E., Kajander, T., Goldman, A., Butcher, S.
PDB entry 4kfv: Structural insight into Golgi membrane stacking by GRASP65 and GRASP55
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-28
Authors: Liu, X., Hu, J.
PDB entry 4kfw: Structural insight into Golgi membrane stacking by GRASP65 and GRASP55
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-04-28
Authors: Liu, X., Hu, J.
PDB entry 4kfz: Crystal structure of LMO2 and anti-LMO2 VH complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-04-28
Authors: Sewell, H., Tanaka, T., El Omari, K., Cruz-Migoni, A., Mancini, E.J., Fuentes-Fernandez, N., Chambers, J., Rabbitts, T.H.
PDB entry 4kg0: Crystal structure of the drosophila melanogaster neuralized-nhr1 domain
Classification: ENDOCYTOSIS
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-28
Authors: Gupta, D., Ehebauer, M.T., Chirgadze, D.Y., Bolanos-Garcia, V.M., Blundell, T.L.
PDB entry 4kg2: Crystal Structure of AmpC beta-lactamase from E. coli in Complex with Cefotaxime
Classification: Hydrolase/antibiotic
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2013-04-28
Authors: Docter, B.E., Baggett, V.L., Powers, R.A., Wallar, B.J.
PDB entry 4kg3: Crystal structure of Saccharomyces cerevisiae Dcp2 Nudix domain in complex with Mg (E153Q mutation)
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-04-28
Authors: Aglietti, R.A., Floor, S.N., Gross, J.D.
PDB entry 4kg4: Crystal structure of Saccharomyces cerevisiae Dcp2 Nudix domain (E198Q mutation)
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-28
Authors: Aglietti, R.A., Floor, S.N., Gross, J.D.
PDB entry 4kg5: Crystal Structure of AmpC beta-lactamase N152G Mutant in Complex with Cefotaxime
Classification: Hydrolase/antibiotic
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2013-04-28
Authors: Docter, B.E., Baggett, V.L., Powers, R.A., Wallar, B.J.
PDB entry 4kg6: Crystal Structure of AmpC beta-lactamase N152G Mutant from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-04-28
Authors: Docter, B.E., Baggett, V.L., Powers, R.A., Wallar, B.J.
PDB entry 4kg7: Structure of MycP3 protease from the type VII (ESX-3) secretion system.
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-28
Authors: Korotkov, K.V., Evans, T.J.
PDB entry 4kg8: Crystal structure of light mutant
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-04-28
Authors: Liu, W., Zhan, C., Kumar, P.R., Bonanno, J.B., Nathenson, S.G., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
PDB entry 4kg9: Crystal Structure Of USP7-NTD with MCM-BP
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-04-29
Authors: Saridakis, V., Luthra, N.
PDB entry 4kga: Crystal structure of kallikrein-related peptidase 4
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2013-04-29
Authors: Ilyichova, O.V., Swedberg, J.E., de Veer, S.J., Sit, K.C., Harris, J.M., Buckle, A.M.
PDB entry 4kgb: Structure of succinyl-CoA: 3-ketoacid CoA transferase from Drosophila melanogaster
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2013-04-29
Authors: Wang, Y.C., Shi, Z.B., Zhang, M.
PDB entry 4kgc: Nucleosome Core Particle Containing (ETA6-P-CYMENE)-(1, 2-ETHYLENEDIAMINE)-RUTHENIUM
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2013-04-29
Authors: Adhireksan, Z., Davey, C.A.
PDB entry 4kgd: High-resolution crystal structure of pyruvate oxidase from L. plantarum in complex with phosphate
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2013-04-29
Authors: Neumann, P., Tittmann, K.
PDB entry 4kge: Crystal structure of near-infrared fluorescent protein with an extended stokes shift, pH 4.5
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-04-29
Authors: Malashkevich, V.N., Piatkevich, K., Almo, S.C., Verkhusha, V., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4kgf: Crystal structure of near-infrared fluorescent protein with an extended stokes shift, ph 8.0
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-04-29
Authors: Malashkevich, V.N., Piatkevich, K., Almo, S.C., Verkhusha, V., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4kgg: Crystal structure of light mutant2 and dcr3 complex
Classification: Cytokine/Signaling Protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2013-04-29
Authors: Liu, W., Bonanno, J.B., Zhan, C., Kumar, P.R., Toro, R., Nathenson, S.G., Almo, S.C., Atoms-to-Animals: The Immune Function Network (IFN), New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4kgh: Crystal Structure of human splunc1 lacking the secretion signal sequence
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.806 Å
Deposited: 2013-04-29
Authors: Betts, L., Walton, W.G.
PDB entry 4kgi: Crystal structure of a glutathione transferase family member from Shigella flexneri, target EFI-507258, bound GSH, TEV-his-tag linker in active site
Classification: TRANSFERASE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-29
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4kgj: Crystal structure of human alpha-L-iduronidase complex with 5-fluoro-alpha-L-idopyranosyluronic acid fluoride
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2013-04-29
Authors: Bie, H., Yin, J., He, X., Kermode, A.R., Goddard-Borger, E.D., Withers, S.G., James, M.N.G.
PDB entry 4kgk: Bacterial tRNA(HIS) Guanylyltransferase (Thg1)-Like Protein in complex with GTP
Classification: TRANSFERASE
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2013-04-29
Authors: Hyde, S.J., Rao, B.S., Eckenroth, B.E., Jackman, J.E., Doublie, S.
PDB entry 4kgl: Crystal structure of human alpha-L-iduronidase complex with [2R,3R,4R,5S]-2-carboxy-3,4,5-trihydroxy-piperidine
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2013-04-29
Authors: Bie, H., Yin, J., He, X., Kermode, A.R., Goddard-Borger, E.D., Withers, S.G., James, M.N.G.
PDB entry 4kgm: Bacterial tRNA(HIS) Guanylyltransferase (Thg1)-Like Protein in complex with ATP
Classification: TRANSFERASE
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.361 Å
Deposited: 2013-04-29
Authors: Hyde, S.J., Rao, B.S., Eckenroth, B.E., Jackman, J.E., Doublie, S.
PDB entry 4kgn: Crystal structure of a tRNA (cytidine(34)-2'-O)-methyltransferase bound to S-adenosyl homocysteine
Classification: TRANSFERASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-04-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4kgo: Crystal Structure of double Leucine to Methionine mutant human splunc1 lacking the secretion signal sequence
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.194 Å
Deposited: 2013-04-29
Authors: Betts, L., Walton, W.G.
PDB entry 4kgq: Crystal structure of a human light loop mutant in complex with dcr3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2013-04-29
Authors: Liu, W., Zhan, C., Bonanno, J.B., Sampathkumar, P., Toro, R., Nathenson, S.G., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
PDB entry 4kgr: Backbone Modifications in the Protein GB1 Helix: beta-3-Ala24, beta-3-Lys28, beta-3-Lys31, beta-3-Asn35
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-29
Authors: Reinert, Z.E., Lengyel, G.A., Horne, W.S.
PDB entry 4kgs: Backbone Modifications in the Protein GB1 Loops: beta-3-Val21, beta-3-Asp40
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-04-29
Authors: Reinert, Z.E., Lengyel, G.A., Horne, W.S.
PDB entry 4kgt: Backbone Modifications in the Protein GB1 Turns: Aib10, D-Pro47
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-29
Authors: Reinert, Z.E., Lengyel, G.A., Horne, W.S.
PDB entry 4kgv: The R state structure of E. coli ATCase with ATP bound
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-29
Authors: Cockrell, G.M., Zheng, Y., Guo, W., Peterson, A.W., Kantrowitz, E.R.
PDB entry 4kgx: The R state structure of E. coli ATCase with CTP bound
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.202 Å
Deposited: 2013-04-29
Authors: Cockrell, G.M., Zheng, Y., Guo, W., Peterson, A.W., Kantrowitz, E.R.
PDB entry 4kgz: The R state structure of E. coli ATCase with UTP and Magnesium bound
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-29
Authors: Cockrell, G.M., Zheng, Y., Guo, W., Peterson, A.W., Kantrowitz, E.R.
PDB entry 4kh0: The R state structure of E. coli ATCase with ATP and Magnesium bound
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-04-29
Authors: Cockrell, G.M., Zheng, Y., Guo, W., Peterson, A.W., Kantrowitz, E.R.
PDB entry 4kh1: The R state structure of E. coli ATCase with CTP,UTP, and Magnesium bound
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-29
Authors: Cockrell, G.M., Zheng, Y., Guo, W., Peterson, A.W., Kantrowitz, E.R.
PDB entry 4kh2: Crystal structure of human alpha-L-iduronidase complex with 2-deoxy-2-fluoro-alpha-L-idopyranosyluronic acid fluoride
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2013-04-29
Authors: Bie, H., Yin, J., He, X., Kermode, A.R., Goddard-Borger, E.D., Withers, S.G., James, M.N.G.
PDB entry 4kh3: Structure of a bacterial self-associating protein
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-04-30
Authors: Heras, B., Gee, C.L., Schembri, M.A., Totsika, M.
PDB entry 4kh4: Toxoplasma gondii NTPDase1 C258S/C268S in complex with Mg and AMPPNP
Classification: HYDROLASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-04-30
Authors: Krug, U., Totzauer, R., Strater, N.
PDB entry 4kh5: Toxoplasma gondii NTPDase1 C258S/C268S in complex with Mg and AMPNP
Classification: HYDROLASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-04-30
Authors: Krug, U., Totzauer, R., Strater, N.
PDB entry 4kh6: Toxoplasma gondii NTPDase1 C258S/C268S E493G crystallized with Mg and AMPNP
Classification: HYDROLASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-30
Authors: Krug, U., Totzauer, R., Strater, N.
PDB entry 4kh7: Crystal structure of a glutathione transferase family member from salmonella enterica ty2, target efi-507262, with bound glutathione
Classification: TRANSFERASE
Source organism: Salmonella enterica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-30
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4kh8: Crystal structure of a Lipocalin-like protein (EF0376) from Enterococcus faecalis V583 at 1.60 A resolution
Classification: Structural Genomics, Unknown Function
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4kh9: Crystal structure of a DUF4785 family protein (lpg0956) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1 at 2.00 A resolution
Classification: Structural Genomics, Unknown Function
Source organism: Legionella pneumophila subsp. pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4kha: Structural basis of histone H2A-H2B recognition by the essential chaperone FACT
Classification: CHAPERONE/NUCLEAR PROTEIN
Source organism: Chaetomium thermophilum var. thermophilum; Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-04-30
Authors: Hondele, M., Halbach, F., Hassler, M., Ladurner, A.G.
PDB entry 4khb: Structure of the Spt16D Pob3N heterodimer
Classification: TRANSCRIPTION/REPLICATION
Source organism: Chaetomium thermophilum var. thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-30
Authors: Stuwe, T., Zhang, E., Ladurner, A.G.
PDB entry 4khm: HCV NS5B GT1A with GSK5852
Classification: REPLICATION/REPLICATION INHIBITOR
Source organism: Hepatitis C virus subtype 1a
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-04-30
Authors: Williams, S.P., Kahler, K.M., Shotwell, J.B.
PDB entry 4khn: Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerase
Classification: HYDROLASE, TRANSFERASE/dna
Source organism: Enterobacteria phage RB69; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2013-04-30
Authors: Guja, K.E., Jacewicz, A., Trzemecka, A., Plochocka, D., Yakubovskaya, E., Bebenek, A., Garcia-Diaz, M.
PDB entry 4kho: Structure of the FACT complex Subunit Spt16M
Classification: TRANSCRIPTION/REPLICATION
Source organism: Chaetomium thermophilum var. thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-30
Authors: Stuwe, T., Hondele, M., Ladurner, A.G.
PDB entry 4khp: Structure of the Thermus thermophilus 30S ribosomal subunit in complex with de-6-MSA-pactamycin
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2013-05-01
Authors: Tourigny, D.S., Fernandez, I.S., Kelley, A.C., Ramakrishnan, V.
PDB entry 4khq: Ternary complex of RB69 mutant L415F wit DUMPNPP
Classification: TRANSFERASE/DNA
Source organism: Enterobacteria phage RB69; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.186 Å
Deposited: 2013-05-01
Authors: Clausen, A.R., Pedersen, L.C.
PDB entry 4khr: HCV NS5B GT1A C316Y with GSK5852
Classification: REPLICATION/REPLICATION INHIBITOR
Source organism: Hepatitis C virus subtype 1a
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2013-05-01
Authors: Williams, S.P., Kahler, K.M., Shotwell, J.B.
PDB entry 4khs: Ternary complex of RB69 mutant L415F with a ribonucleotide at 0 position
Classification: TRANSFERASE/DNA
Source organism: Enterobacteria phage RB69; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2013-05-01
Authors: Clausen, A.R., Pedersen, L.C.