LiteFold/PDB huggingface dataset:
PDB entry 7rs3: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-29
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2021-08-10
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rs4: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-8
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2021-08-10
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rs5: Cryo-EM structure of Kip3 (AMPPNP) bound to Taxol-Stabilized Microtubules
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-08-10
Authors: Hernandez-Lopez, R.A., Leschziner, A.E., Arellano-Santoyo, H., Pellman, D., Stokasimov, E., Wang, R.Y.-R.
PDB entry 7rs6: Cryo-EM structure of Kip3 (AMPPNP) bound to GMPCPP-Stabilized Microtubules
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-08-11
Authors: Hernandez-Lopez, R.A., Leschziner, A.E., Arellano-Santoyo, H., Pellman, D., Stokasimov, E., Wang, R.Y.-R.
PDB entry 7rs7: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-30
Classification: TRANSCRIPTION/TRANSCRIPTION Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2021-08-11
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rs8: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-16
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2021-08-11
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rs9: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-25
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-08-11
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rsa: STRUCTURE OF PHOSPHATE-FREE RIBONUCLEASE A REFINED AT 1.26 ANGSTROMS
Classification: HYDROLASE (PHOSPHORIC DIESTER)
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 1988-06-10
Authors: Wlodawer, A., Gilliland, G.L.
PDB entry 7rsb: CLC-ec1 at pH 4.5 100 mM NaGluconate Turn
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2021-08-11
Authors: Fortea, E., Boudker, O., Accardi, A.
PDB entry 7rsc: NMR-driven structure of the KRAS4B-G12D ""alpha-alpha"" dimer on a lipid bilayer nanodisc
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-08-11
Authors: Lee, K., Enomoto, M., Gebregiworgis, T., Gasmi-Seabrook, G.M., Ikura, M., Marshall, C.B.
PDB entry 7rse: NMR-driven structure of the KRAS4B-G12D ""alpha-beta"" dimer on a lipid bilayer nanodisc
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-08-11
Authors: Lee, K., Enomoto, M., Gebregiworgis, T., Gasmi-Seabrook, G.M., Ikura, M., Marshall, C.B.
PDB entry 7rsf: Acetylornithine deacetylase from Escherichia coli
Classification: HYDROLASE
Source organism: Escherichia coli str. K-12 substr. MG1655
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2021-08-11
Authors: Osipiuk, J., Endres, M., Becker, D.P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7rsh: SthK Y26F Closed State
Classification: TRANSPORT PROTEIN
Source organism: Spirochaeta thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-11
Authors: Gao, X., Nimigean, C.
PDB entry 7rsi: The cryo-EM map of KIF18A bound to KIFBP
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2021-08-11
Authors: Tan, Z., Solon, A.L., Schutt, K.L., Jepsen, L., Haynes, S.E., Nesvizhskii, A.I., Sept, D., Stumpff, J., Ohi, R., Cianfrocco, M.A.
PDB entry 7rsj: Structure of the VPS34 kinase domain with compound 14
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.881 Å
Deposited: 2021-08-11
Authors: Hu, D.X., Patel, S., Chen, H., Wang, S., Staben, S., Dimitrova, Y.N., Wallweber, H.A., Lee, J.Y., Chan, G.K.Y., Sneeringer, C.J., Prangley, M.S., Moffat, J.G., Wu, C., Schutt, L.K., Salphati, L., Pang, J., McNamara, E., Huang, H., Chen, Y., Wang, Y., Zhao, W., Lim, J., Murthy, A., Siu, M.
PDB entry 7rsk: The crystal structure from microfluidic crystals of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus
Classification: HYDROLASE
Source organism: Bacteroides cellulosilyticus DSM 14838
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-08-11
Authors: Kim, Y., Nocek, B., Endres, M., Joachimiak, G., Johnson, J., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 7rsl: Seipin forms a flexible cage at lipid droplet formation sites
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2021-08-11
Authors: Arlt, H., Sui, X., Folger, B., Adams, C., Chen, X., Remme, R., Hamprecht, F.A., DiMaio, F., Liao, M., Goodman, J.M., Farese Jr, R.V., Walther, T.C.
PDB entry 7rsm: Crystal structure of pyrrolysyl-tRNA synthetase (N346D/C348S/Y384F) in complex with o-Chlorophenylalanine and AMP-PNP
Classification: RNA BINDING PROTEIN
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-08-11
Authors: Yang, K., Liu, W.
PDB entry 7rsn: AMC018 SOSIP.v4.2 in complex with PGV04 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2021-08-11
Authors: Cottrell, C.A., Ward, A.B.
PDB entry 7rso: AMC016 SOSIP.v4.2 in complex with PGV04 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-08-11
Authors: Bader, D.L.V., Cottrell, C.A., Ward, A.B.
PDB entry 7rsp: Structure of the VPS34 kinase domain with compound 14
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2021-08-11
Authors: Hu, D.X., Patel, S., Chen, H., Wang, S., Staben, S., Dimitrova, Y.N., Wallweber, H.A., Lee, J.Y., Chan, G.K.Y., Sneeringer, C.J., Prangley, M.S., Moffat, J.G., Wu, C., Schutt, L.K., Salphati, L., Pang, J., McNamara, E., Huang, H., Chen, Y., Wang, Y., Zhao, W., Lim, J., Murthy, A., Siu, M.
PDB entry 7rsq: Cryo-EM structure of KIFBP core
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-08-11
Authors: Solon, A.L., Tan, Z., Schutt, K.L., Jepsen, L., Haynes, S.E., Nesvizhskii, A.I., Sept, D., Stumpff, J., Ohi, R., Cianfrocco, M.A.
PDB entry 7rsr: Kod-RI incorporating PMT, n+2
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-08-11
Authors: Hajjar, M., Chim, N., Chaput, J.C.
PDB entry 7rss: Kod-RI incorporating DNA, n+2
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2021-08-11
Authors: Hajjar, M., Chim, N., Chaput, J.C.
PDB entry 7rst: The Crystal Structure of Recombinant Chloroperoxidase Expressed in Aspergillus niger
Classification: OXIDOREDUCTASE
Source organism: Leptoxyphium fumago
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2021-08-11
Authors: Tang, X., Venkadesh, S., Zhou, J., Rosen, B., Wang, X.
PDB entry 7rsu: TNA polymerase, n+2 product
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-11
Authors: Maola, V., Chaput, J., Chim, N.
PDB entry 7rsv: Structure of the VPS34 kinase domain with compound 5
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2021-08-11
Authors: Hu, D.X., Patel, S., Chen, H., Wang, S., Staben, S., Dimitrova, Y.N., Wallweber, H.A., Lee, J.Y., Chan, G.K.Y., Sneeringer, C.J., Prangley, M.S., Moffat, J.G., Wu, C., Schutt, L.K., Salphati, L., Pang, J., McNamara, E., Huang, H., Chen, Y., Wang, Y., Zhao, W., Lim, J., Murthy, A., Siu, M.
PDB entry 7rsw: Crystal structure of group B human rotavirus VP8*
Classification: STRUCTURAL PROTEIN
Source organism: Rotavirus; Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2021-08-11
Authors: Hu, L., Salmen, W., Sankaran, B., Prasad, B.V.
PDB entry 7rsx: HIV-1 gp120 complex with CJF-III-049-S
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2021-08-12
Authors: Liang, S., Hendrickson, W.A.
PDB entry 7rsy: HIV-1 gp120 complex with CJF-III-049-R
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-08-12
Authors: Liang, S., Hendrickson, W.A.
PDB entry 7rsz: HIV-1 gp120 complex with CJF-II-204
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2021-08-12
Authors: Liang, S., Hendrickson, W.A.
PDB entry 7rt0: 1.80 A resolution structure of MAO from P. nicotinovorans in complex with FAD
Classification: OXIDOREDUCTASE
Source organism: Paenarthrobacter nicotinovorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-12
Authors: Lovell, S., Bowman, A., Battaile, K.P., Deay, D.O.
PDB entry 7rt1: Crystal Structure of KRAS G12D with compound 15 (4-(4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-3-yl]-8-fluoro-2-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}pyrido[4,3-d]pyrimidin-7-yl)naphthalen-2-ol) bound
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2021-08-12
Authors: Gunn, R.J., Thomas, N.C., Xiaolun, W., Lawson, J.D., Marx, M.A.
PDB entry 7rt2: Crystal Structure of KRAS G12D with compound 25 (4-(4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-3-yl]-8-fluoro-2-{[(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidin-7-yl)naphthalen-2-ol) bound
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2021-08-12
Authors: Gunn, R.J., Thomas, N.C., Xiaolun, W., Lawson, J.D., Marx, M.A.
PDB entry 7rt3: Crystal Structure of KRAS G12D with compound 24 (4-(4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-3-yl]-8-fluoro-2-{[(2S,4S,7aR)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidin-7-yl)naphthalen-2-ol) bound
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2021-08-12
Authors: Gunn, R.J., Thomas, N.C., Xiaolun, W., Lawson, J.D., Marx, M.A.
PDB entry 7rt4: KRAS G12D in complex with Compound 5B (7-(8-chloronaphthalen-1-yl)-8-fluoro-2-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}-4-(piperazin-1-yl)pyrido[4,3-d]pyrimidine)
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-12
Authors: Gunn, R.J., Thomas, N.C., Xiaolun, W., Lawson, J.D., Marx, M.A.
PDB entry 7rt5: Crystal structure of KRAS G12D with compound 36 (4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-3-yl]-7-(8-ethynyl-7-fluoronaphthalen-1-yl)-8-fluoro-2-{[(4s,7as)-tetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidine) bound
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2021-08-12
Authors: Gunn, R.J., Thomas, N.C., Xiaolun, W., Lawson, J.D., Marx, M.A.
PDB entry 7rt7: Crystal structure of the RhsP2 C-terminal toxin domain in complex with its immunity protein, RhsI2
Classification: TOXIN/ANTITOXIN
Source organism: Pseudomonas aeruginosa (strain UCBPP-PA14)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2021-08-12
Authors: Bullen, N.P., Prehna, G., Whitney, J.C.
PDB entry 7rt9: Crystal structures of human PYY and NPY
Classification: HORMONE/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-12
Authors: Langley, D.B., Christ, D.
PDB entry 7rta: Crystal structures of human PYY and NPY
Classification: HORMONE/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-08-12
Authors: Langley, D.B., Christ, D.
PDB entry 7rtb: Peptide-19 bound to the Glucagon-Like Peptide-1 Receptor (GLP-1R)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.14 Å
Deposited: 2021-08-12
Authors: Johnson, R.M., Danev, R., Sexton, P.M., Wootten, D.
PDB entry 7rtc: Crystal structure of the ARM domain from Drosophila SARM1 in complex with NaMN
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2021-08-13
Authors: Gu, W., Ve, T., Kobe, B.
PDB entry 7rtd: SARS-CoV-2 Spike-derived peptide S269-277 (YLQPRTFLL) presented by HLA-A*02:01
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-08-13
Authors: Szeto, C., Nguyen, A.T., Gras, S.
PDB entry 7rte: X-ray structure of wild type RBPJ-L3MBTL3-DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2021-08-13
Authors: Hall, D.P., Kovall, R.A., Yuan, Z.
PDB entry 7rtf: SthK R120A Closed State
Classification: TRANSPORT PROTEIN
Source organism: Spirochaeta thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-08-13
Authors: Gao, X., Nimigean, C.
PDB entry 7rtg: Crystal Structure of the Human Adenosine Deaminase 1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.591 Å
Deposited: 2021-08-13
Authors: Ma, M.T., Lieberman, R.L., Blazeck, J., Jennings, M.R.
PDB entry 7rth: Crystal structure of an anti-lysozyme nanobody in complex with an anti-nanobody Fab ""NabFab""
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2021-08-13
Authors: Filippova, E.V., Mukherjee, S., Bloch, J.S., Locher, K.P., Kossiakoff, A.A.
PDB entry 7rti: X-ray structure of RBPJ-L3MBTL3(dT62)-DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-08-13
Authors: Hall, D.P., Kovall, R.A., Yuan, Z.
PDB entry 7rtj: SthK Y26F Activated State
Classification: TRANSPORT PROTEIN
Source organism: Spirochaeta thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-08-13
Authors: Gao, X., Nimigean, C.
PDB entry 7rtk: Structure of the (NIAU)2 complex with N-terminal mutation of ISCU2 Y35D at 2.5 A resolution
Classification: TRANSFERASE
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-13
Authors: Boniecki, M.T., Cygler, M.
PDB entry 7rtm: Cryo-EM Structure of the Sodium-driven Chloride/Bicarbonate Exchanger NDCBE (SLC4A8)
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-08-13
Authors: Wang, W.G., Tsirulnikov, K., Zhekova, H., Kayik, G., Muhammad-Khan, H., Azimov, R., Abuladze, N., Kao, L., Newman, D., Noskov, S.Y., Zhou, Z.H., Pushkin, A., Kurtz, I.
PDB entry 7rtn: Cryo-EM structure of bluetongue virus capsid protein VP5 at low endosomal pH
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus (serotype 1 / isolate South Africa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-08-13
Authors: Xia, X., Wu, W.N., Cui, Y.X., Roy, P., Zhou, Z.H.
PDB entry 7rto: Cryo-EM structure of bluetongue virus capsid protein VP5 at low endosomal pH intermediate state 2
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus (serotype 1 / isolate South Africa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-08-13
Authors: Xia, X., Wu, W.N., Cui, Y.X., Roy, P., Zhou, Z.H.
PDB entry 7rtp: Structure of full-length human lambda-6A light chain JTO in complex with urea stabilizer 20 [1-(2-(7-(diethylamino)-4-methyl-2-oxo-2H-chromen-3-yl)ethyl)-3-(pyridin-3-ylmethyl)urea]
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2021-08-13
Authors: Yan, N.L., Wilson, I.A., Kelly, J.W.
PDB entry 7rtq: Sterol 14alpha demethylase (CYP51) from Naegleria fowleri in complex with an inhibitor R)-N-(1-(3,4'-difluorobiphenyl-4-yl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadiazol-2-yl)benzamide
Classification: OXIDOREDUCTASE
Source organism: Naegleria fowleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2021-08-13
Authors: Lepesheva, G.I., Hargrove, T.Y., Wawrzak, Z.
PDB entry 7rtr: YLQ-SG3 TCR in complex with SARS-CoV-2 Spike-derived peptide S269-277 (YLQPRTFLL) presented by HLA-A*02:01
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-08-14
Authors: Szeto, C., Gras, S.
PDB entry 7rts: Crystal structure of the TIR domain from the grapevine disease resistance protein RUN1 without the AE interface
Classification: SIGNALING PROTEIN
Source organism: Vitis rotundifolia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-08-15
Authors: Burdett, H., Kobe, B.
PDB entry 7rtt: Cryo-EM structure of a TTYH2 cis-dimer
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-08-15
Authors: Li, B., Brohawn, S.G., Hoel, C.M.
PDB entry 7rtu: Cryo-EM structure of a TTYH2 trans-dimer
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2021-08-15
Authors: Li, B., Brohawn, S.G., Hoel, C.M.
PDB entry 7rtv: Cryo-EM structure of monomeric TTYH2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2021-08-15
Authors: Li, B., Brohawn, S.G., Hoel, C.M.
PDB entry 7rtw: Cryo-EM structure of a TTYH3 cis-dimer
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2021-08-15
Authors: Li, B., Brohawn, S.G., Hoel, C.M.
PDB entry 7rtx: Actophorin grown in microgravity
Classification: MOTOR PROTEIN
Source organism: Acanthamoeba castellanii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-08-16
Authors: Lieberman, R.L., Quirk, S.
PDB entry 7rty: Crystal Structure of PsfC from Pseudomonas syringae PB-5123
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.963 Å
Deposited: 2021-08-16
Authors: Ongpipattanakul, C., Nair, S.K.
PDB entry 7rtz: X-ray crystallographic structure of a beta-hairpin peptide derived from amyloid beta 14-40
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-16
Authors: Samdin, T.D., Kreutzer, A.G., Nowick, J.S.
PDB entry 7ru0: SthK R120A Open State 1
Classification: TRANSPORT PROTEIN
Source organism: Spirochaeta thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-08-16
Authors: Gao, X., Nimigean, C., Schmidpeter, P.
PDB entry 7ru1: SARS-CoV-2-6P-Mut7 S protein (C3 symmetry)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-08-16
Authors: Ozorowski, G., Turner, H.L., Ward, A.B.
PDB entry 7ru2: SARS-CoV-2-6P-Mut7 S protein (asymmetric)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-16
Authors: Ozorowski, G., Turner, H.L., Ward, A.B.
PDB entry 7ru3: CC6.33 IgG in complex with SARS-CoV-2-6P-Mut7 S protein (non-uniform refinement)
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-16
Authors: Ozorowski, G., Turner, H.L., Ward, A.B.
PDB entry 7ru4: CC6.33 IgG in complex with SARS-CoV-2-6P-Mut7 S protein (RBD/Fv local refinement)
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-16
Authors: Ozorowski, G., Turner, H.L., Ward, A.B.
PDB entry 7ru5: CC6.30 fragment antigen binding in complex with SARS-CoV-2-6P-Mut7 S protein (non-uniform refinement)
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-08-16
Authors: Ozorowski, G., Turner, H.L., Ward, A.B.
PDB entry 7ru6: Cryo-EM structure of the HIV-1 restriction factor human SERINC3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2021-08-16
Authors: Purdy, M.D., Leonhardt, S.A., Yeager, M.
PDB entry 7ru7: Crystal structure of BtrK, a decarboxylase involved in butirosin biosynthesis
Classification: LYASE
Source organism: Bacillus circulans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-08-16
Authors: Arenas, L.A.R., Paiva, F.C.R., Huang, F., Leadlay, P., Dias, M.V.B.
PDB entry 7ru8: CC6.30 fragment antigen binding in complex with SARS-CoV-2-6P-Mut7 S protein (RBD/Fv local refinement)
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-08-16
Authors: Ozorowski, G., Turner, H.L., Ward, A.B.
PDB entry 7ru9: Metazoan pre-targeting GET complex (cBUGG-in)
Classification: CHAPERONE
Source organism: Danio rerio; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-16
Authors: Keszei, A.F.A., Yip, M.C.J., Shao, S.
PDB entry 7rua: Metazoan pre-targeting GET complex (cBUGG-out)
Classification: CHAPERONE
Source organism: Danio rerio; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-08-16
Authors: Keszei, A.F.A., Yip, M.C.J., Shao, S.
PDB entry 7ruc: Metazoan pre-targeting GET complex with SGTA (cBUGGS)
Classification: CHAPERONE
Source organism: Danio rerio; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-08-16
Authors: Keszei, A.F.A., Yip, M.C.J., Shao, S.
PDB entry 7rud: DAHP synthase complex with trifluoropyruvate oxime
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-08-16
Authors: Heimhalt, M., Mukherjee, P., Grainger, R., Szabla, R., Brown, C., Turner, R., Junop, M.S., Berti, P.J.
PDB entry 7rue: DAHP synthase complexed with trifluoropyruvate semicarbazone
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-16
Authors: Heimhalt, M., Mukherjee, P., Grainger, R., Szabla, R., Brown, C., Turner, R., Junop, M.S., Berti, P.J.
PDB entry 7rug: Human SERINC3-DeltaICL4
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2021-08-17
Authors: Purdy, M.D., Leonhardt, S.A., Yeager, M.
PDB entry 7ruh: Bromodomain-containing protein 4 (BRD4) bromodomain 2 (BD2) complexed with XR844
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-08-17
Authors: Ratia, K.M., Xiong, R., Li, Y., Shen, Z., Zhao, J., Huang, F., Dubrovyskyii, O., Thatcher, G.R.
PDB entry 7rui: Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2021-08-17
Authors: Ratia, K.M., Xiong, R., Li, Y., Shen, Z., Zhao, J., Huang, F., Dubrovyskyii, O., Thatcher, G.R.
PDB entry 7ruj: E. coli cysteine desulfurase SufS N99A
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-17
Authors: Dunkle, J.A., Gogar, R., Frantom, P.A.
PDB entry 7rul: I5R8 Mastoparano is a peptide synthetic, modified of Mastoparano (extracted from wasp venom)
Classification: ANTIVIRAL PROTEIN
Source organism: Vespula lewisii
Experimental method: SOLUTION NMR
Deposited: 2021-08-17
Authors: Alves, E.S.F., Santos, B.P.O.
PDB entry 7rum: Endolysin from Escherichia coli O157:H7 phage FTEbC1, LysT84
Classification: HYDROLASE
Source organism: Salmonella phage GEC_vB_GOT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2021-08-17
Authors: Love, M.J., Billington, C., Dobson, R.C.J.
PDB entry 7run: Crystal structure of phosphorylated RET tyrosine kinase domain complexed with a pyrrolo[2,3-d]pyrimidine inhibitor.
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.51 Å
Deposited: 2021-08-17
Authors: Lee, C.C., Spraggon, G.
PDB entry 7ruo: Crystal structure of human UTP15
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-17
Authors: Dehghani-Tafti, S., Dong, A., Zeng, H., Hutchinson, A., Seitova, A., Loppnau, P., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 7rup: Structure of the human GIGYF2-TNRC6A complex
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2021-08-18
Authors: Sobti, M., Mead, B.J., Igreja, C., Stewart, A.G., Christie, M.
PDB entry 7ruq: Structure of the human GIGYF1-TNRC6C complex
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2021-08-18
Authors: Sobti, M., Mead, B.J., Igreja, C., Stewart, A.G., Christie, M.
PDB entry 7rur: Crystal structure of the hexadecameric form of Rv3208A
Classification: UNKNOWN FUNCTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-18
Authors: Mandyoli, L., Sacchettini, J.C.
PDB entry 7rus: Crystal structure of the octameric form of Rv3208A
Classification: UNKNOWN FUNCTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2021-08-18
Authors: Mandyoli, L., Sacchettini, J.C.
PDB entry 7rut: Structure of Human ATP:Cobalamin Adenosyltransferase R190C bound to ATP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-08-18
Authors: Mascarenhas, R., Gouda, H., Koutmos, M., Banerjee, R.
PDB entry 7ruu: Structure of Human ATP:Cobalamin Adenosyltransferase R190C bound to adenosylcobalamin
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-18
Authors: Mascarenhas, R., Gouda, H., Koutmos, M., Banerjee, R.
PDB entry 7ruv: Structure of Human ATP:Cobalamin Adenosyltransferase E193K bound to adenosylcobalamin
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-18
Authors: Mascarenhas, R., Gouda, H., Koutmos, M., Banerjee, R.
PDB entry 7ruw: Crystal structure of the BCL6 BTB domain in complex with OICR-7859
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rux: Crystal structure of the BCL6 BTB domain in complex with OICR-8311
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7ruy: Crystal structure of the BCL6 BTB domain in complex with OICR-8388
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7ruz: Crystal structure of the BCL6 BTB domain in complex with OICR-8445
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv0: Crystal structure of the BCL6 BTB domain in complex with OICR-8446
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv1: Crystal structure of the BCL6 BTB domain in complex with OICR-8826
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv2: Crystal structure of the BCL6 BTB domain in complex with OICR-8828
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv3: Crystal structure of the BCL6 BTB domain in complex with OICR-9124
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv4: Crystal structure of the BCL6 BTB domain in complex with OICR-9153
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv5: Crystal structure of the BCL6 BTB domain in complex with OICR-9287
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv6: Crystal structure of the BCL6 BTB domain in complex with OICR-9288
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.683 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv7: Crystal structure of the BCL6 BTB domain in complex with OICR-9322
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv8: Crystal structure of the BCL6 BTB domain in complex with OICR-10268
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rv9: Crystal structure of the BCL6 BTB domain in complex with OICR-10269
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-08-18
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7rva: Updated Crystal Structure of Replication Initiator Protein REPE54.
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2021-08-18
Authors: Ward, A.R., Snow, C.D.
PDB entry 7rvb: High resolution map of molecular chaperone Artemin
Classification: CHAPERONE
Source organism: Artemia franciscana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.04 Å
Deposited: 2021-08-18
Authors: Parvate, A.D., Powell, S.M., Brookreason, J.T., Novikova, I.V., Evans, J.E.
PDB entry 7rvc: Segment from the human prion protein 168-176 EYSNQNNFV
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.002 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rvd: Segment from the mouse/cow prion protein 168-176 QYSNQNNFV
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.003 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rve: Segment from the S170N mutant of the human prion protein 168-176 EYNNQNNFV
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 0.85 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rvf: Segment from the Y169F mutant of the bank vole prion protein 168-176 QFNNQNNFV
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rvg: Segment from rabbit/pig prion protein 168-176 QYSNQNSFV
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rvh: Q172E mutant of the bank vole prion protein 168-176 QYNNENNFV
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 0.9 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rvi: Segment from naked mole rat (elk T174S) prion protein 168-176 QYNNQNSFV
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.05 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rvj: Segment from the human prion protein 169-175 YSNQNNF
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rvk: Segment from Y169G mutant of the human prion protein 169-175 GSNQNNF
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rvl: Segment from the Y169F mutant of the human prion protein 168-176 EFSNQNNFV
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1 Å
Deposited: 2021-08-18
Authors: Glynn, C., Rodriguez, J.A., Hernandez, E.
PDB entry 7rvm: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI11
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rvn: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI12
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rvo: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI13
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-19
Authors: Yang, K., Sankaran, B., Liu, W.
PDB entry 7rvp: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI14
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-19
Authors: Yang, K., Sankaran, B., Liu, W.
PDB entry 7rvq: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI16
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rvr: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI18
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rvs: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI19
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rvt: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI20
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-19
Authors: Yang, K., Sankaran, B., Liu, W.
PDB entry 7rvu: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI21
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-19
Authors: Yang, K., Sankaran, B., Liu, W.
PDB entry 7rvv: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI22
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rvw: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI23
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rvx: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI24
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rvy: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI25
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rvz: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI26
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-19
Authors: Yang, K., Sankaran, B., Liu, W.
PDB entry 7rw0: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI27
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-19
Authors: Yang, K., Liu, W.
PDB entry 7rw1: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI28
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-19
Authors: Yang, K., Sankaran, B., Liu, W.
PDB entry 7rw2: Cryo-EM structure of NTD-directed neutralizing antibody 5-7 in complex with prefusion SARS-CoV-2 spike glycoprotein
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-08-19
Authors: Cerutti, G., Shapiro, L.
PDB entry 7rw3: E. coli cysteine desulfurase SufS N99D
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-08-19
Authors: Dunkle, J.A., Gogar, R., Frantom, P.A.
PDB entry 7rw4: Crystal structure of junctophilin-1
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2021-08-19
Authors: Yang, Z., Panwar, P., Van Petegem, F.
PDB entry 7rw5: Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor Compound 1
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2021-08-19
Authors: Jin, L., Padyana, A.K.
PDB entry 7rw6: BORF2-APOBEC3Bctd Complex
Classification: OXIDOREDUCTASE/HYDROLASE
Source organism: Escherichia coli K-12; Homo sapiens; Human gammaherpesvirus 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2021-08-19
Authors: Shaban, N.M., Yan, R., Shi, K., McLellan, J.S., Yu, Z., Harris, R.S.
PDB entry 7rw7: Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor Compound 9
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2021-08-19
Authors: Jin, L., Padyana, A.K.
PDB entry 7rw8: AP2 bound to heparin in the closed conformation
Classification: ENDOCYTOSIS
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-08-19
Authors: Baker, R.W., Hollopeter, G., Partlow, E.A.
PDB entry 7rw9: AP2 bound to heparin in the bowl conformation
Classification: ENDOCYTOSIS
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-08-19
Authors: Baker, R.W., Hollopeter, G., Partlow, E.A.
PDB entry 7rwa: AP2 bound to heparin and Tgn38 tyrosine cargo peptide
Classification: ENDOCYTOSIS
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2021-08-19
Authors: Baker, R.W., Hollopeter, G., Partlow, E.A.
PDB entry 7rwb: AP2 bound to the APA domain of SGIP in the presence of heparin
Classification: ENDOCYTOSIS
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-08-19
Authors: Baker, R.W., Hollopeter, G., Partlow, E.A.
PDB entry 7rwc: AP2 bound to the APA domain of SGIP and heparin; partial signal subtraction and symmetry expansion
Classification: ENDOCYTOSIS
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-08-19
Authors: Baker, R.W., Hollopeter, G., Partlow, E.A.
PDB entry 7rwe: Crystal structure of CDK2 liganded with compound GPHR787
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2021-08-19
Authors: Sun, L., Schonbrunn, E.
PDB entry 7rwf: Crystal structure of CDK2 in complex with TW8672
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-08-19
Authors: Sun, L., Schonbrunn, E.
PDB entry 7rwg: "Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor AGI-43192
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2021-08-19
Authors: Jin, L., Padyana, A.K.
PDB entry 7rwh: Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor AGI-41998
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2021-08-19
Authors: Jin, L., Padyana, A.K.
PDB entry 7rwi: Mycobacterium tuberculosis RNA polymerase sigma L holoenzyme open promoter complex containing TNP-2198
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2021-08-19
Authors: Molodtsov, V., Ebright, R.H.
PDB entry 7rwj: afTMEM16 in C22 lipid nanodiscs with MSP2N2 scaffold protein in the presnece of Ca2+
Classification: LIPID TRANSPORT
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-08-20
Authors: Falzone, M.E., Accardi, A.
PDB entry 7rwk: Structure of Cap5 from Asticcacaulis sp.
Classification: UNKNOWN FUNCTION
Source organism: Asticcacaulis sp. YBE204
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-08-20
Authors: Huang, R.H., Fatma, S., Chakravarti, A.
PDB entry 7rwl: Envelope-associated Adeno-associated virus serotype 2
Classification: VIRUS
Source organism: Adeno-associated dependoparvovirus A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2021-08-20
Authors: Hull, J.A., Mietzsch, M., Chipman, P., Strugatsky, D., McKenna, R.
PDB entry 7rwm: Structure of Cap5 from Lactococcus lactis
Classification: UNKNOWN FUNCTION
Source organism: Lactococcus lactis subsp. cremoris IBB477
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2021-08-20
Authors: Huang, R.H., Fatma, S., Chakravarti, A.
PDB entry 7rwn: Crystal Structure of BPTF bromodomain in complex with 4-chloro-5-{4-[(dimethylamino)methyl]anilino}-2-methylpyridazin-3(2H)-one
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2021-08-20
Authors: Zahid, H., Buchholz, C., Johnson, J.A., Shi, K., Aihara, H., Pomerantz, W.C.K.
PDB entry 7rwo: Crystal Structure of BPTF bromodomain in complex with 4-chloro-2-methyl-5-[(1,2,3,4-tetrahydroisoquinolin-7-yl)amino]pyridazin-3(2H)-one
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2021-08-20
Authors: Zahid, H., Buchholz, C., Johnson, J.A., Shi, K., Aihara, H., Pomerantz, W.C.K.