LiteFold/PDB huggingface dataset:
PDB entry 7b0a: Puumala virus-like particle glycoprotein spike and lattice contacts model.
Classification: VIRUS LIKE PARTICLE
Source organism: Puumala orthohantavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 13.9 Å
Deposited: 2020-11-19
Authors: Rissanen, I., Stass, R., Huiskonen, J.T., Bowden, T.A.
PDB entry 7b0b: Fab HbnC3t1p1_C6 bound to SARS-CoV-2 RBD
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2020-11-19
Authors: Borenstein-Katz, A., Diskin, R.
PDB entry 7b0c: [4Fe-4S]-NsrR complexed to 23-bp HmpA1 operator fragment
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces coelicolor A3(2); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-11-19
Authors: Rohac, R., Fontecilla-Camps, J.C., Volbeda, A.
PDB entry 7b0d: Sugar transaminase from Archaeoglobus veneficus
Classification: TRANSFERASE
Source organism: Archaeoglobus veneficus (strain DSM 11195 / SNP6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2020-11-19
Authors: James, P., Littlechild, J.A., De Rose, S.A., Isupov, M.N.
PDB entry 7b0e: Crystal structure of SmbA loop deletion mutant
Classification: SIGNALING PROTEIN
Source organism: Caulobacter vibrioides CB15
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-11-19
Authors: Dubey, B.N., Schirmer, T.
PDB entry 7b0f: TgoT_6G12 Binary complex
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus gorgonarius; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.797 Å
Deposited: 2020-11-19
Authors: Samson, C., Legrand, P., Tekpinar, M., Rozenski, J., Abramov, M., Holliger, P., Pinheiro, V., Herdewijn, P., Delarue, M.
PDB entry 7b0g: TgoT_6G12 binary with 2 hCTPs
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus gorgonarius; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-11-19
Authors: Samson, C., Legrand, P., Tekpinar, M., Rozenski, J., Abramov, M., Holliger, P., Pinheiro, V., Herdewijn, P., Delarue, M.
PDB entry 7b0h: TgoT_6G12 Ternary complex
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus gorgonarius; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2020-11-19
Authors: Samson, C., Legrand, P., Tekpinar, M., Rozenski, J., Abramov, M., Holliger, P., Pinheiro, V., Herdewijn, P., Delarue, M.
PDB entry 7b0i: Structure of a minimal SF3B core in complex with spliceostatin A (form II)
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-11-19
Authors: Cretu, C., Pena, V.
PDB entry 7b0j: TRPC4 in LMNG detergent
Classification: TRANSPORT PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2020-11-20
Authors: Vinayagam, D., Quentin, D., Sistel, O., Merino, F., Stabrin, M., Hofnagel, O., Ledeboer, M.W., Malojcic, G., Raunser, S.
PDB entry 7b0k: Streptococcus pneumoniae LicB bound to choline
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2020-11-20
Authors: Baerland, N., Perez, C.
PDB entry 7b0l: Neisseria gonorrhoeae transaldolase, low-dose inhouse
Classification: TRANSFERASE
Source organism: Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-11-20
Authors: Rabe von Pappenheim, F., Wensien, M., Tittmann, K.
PDB entry 7b0m: Sugar transaminase from a metagenome collected from troll oil field production water
Classification: TRANSFERASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2020-11-20
Authors: Littlechild, J.A., De Rose, S.A., Isupov, M.N., Sayer, C., Karki, S.
PDB entry 7b0n: A 3.7-angstrom structure of Yarrowia lipolytica complex I with an R121M mutation in NUCM.
Classification: MEMBRANE PROTEIN
Source organism: Yarrowia lipolytica
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-11-20
Authors: Hirst, J., Grba, D.
PDB entry 7b0o: In meso structure of the membrane integral lipoprotein intramolecular transacylase Lit from Bacillus cereus in space group P21
Classification: MEMBRANE PROTEIN
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2020-11-20
Authors: Huang, C.-Y., Olatunji, S., Olieric, V., Caffrey, M.
PDB entry 7b0p: In meso structure of the membrane integral lipoprotein intramolecular transacylase Lit from Bacillus cereus in space group P21212
Classification: MEMBRANE PROTEIN
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.935 Å
Deposited: 2020-11-20
Authors: Huang, C.-Y., Olatunji, S., Olieric, V., Caffrey, M.
PDB entry 7b0q: In meso structure of the membrane integral lipoprotein intramolecular transacylase Lit from Bacillus cereus with H85A mutation
Classification: MEMBRANE PROTEIN
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2020-11-20
Authors: Huang, C.-Y., Olatunji, S., Olieric, V., Caffrey, M.
PDB entry 7b0r: In meso structure of the membrane integral lipoprotein intramolecular transacylase Lit from Bacillus cereus with H85R mutation
Classification: MEMBRANE PROTEIN
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-11-20
Authors: Huang, C.-Y., Olatunji, S., Olieric, V., Caffrey, M.
PDB entry 7b0s: TRPC4 in complex with inhibitor GFB-8438
Classification: TRANSPORT PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-11-21
Authors: Vinayagam, D., Quentin, D., Sistel, O., Merino, F., Stabrin, M., Hofnagel, O., Ledeboer, M.W., Malojcic, G., Raunser, S.
PDB entry 7b0t: Crystal structure of MLLT1 YEATS domain T3 mutant in complex with benzimidazole-amide based compound 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-11-21
Authors: Ni, X., Chaikuad, A., Brennan, P.E., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b0u: Stressosome complex from Listeria innocua
Classification: SIGNALING PROTEIN
Source organism: Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2020-11-22
Authors: Miksys, A., Fu, L., Madej, M.G., Ziegler, C.
PDB entry 7b0v: Crystal Structure of human monoamine oxidase B in complex with (E)-3-phenyl-1-(3-(trifluoromethyl)phenyl)prop-2-en-1-one
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-11-23
Authors: Iacovino, L.G., Binda, C.
PDB entry 7b0w: Crystal structure of the E. coli type 1 pilus assembly inhibitor FimI bound to FimC
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-11-23
Authors: Scharer, M.A., Zigova, Z., Giese, C., Puorger, C., Ignatov, O., Capitani, G., Glockshuber, R.
PDB entry 7b0x: Crystal structure of the ternary complex of the E. coli type 1 pilus proteins FimC, FimI and the N-terminal domain of FimD
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-11-23
Authors: Scharer, M.A., Zigova, Z., Giese, C., Puorger, C., Ignatov, O., Capitani, G., Glockshuber, R.
PDB entry 7b0y: Structure of a transcribing RNA polymerase II-U1 snRNP complex
Classification: SPLICING
Source organism: Homo sapiens; Sus scrofa domesticus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-11-23
Authors: Zhang, S., Aibara, S., Vos, S.M., Agafonov, D.E., Luehrmann, R., Cramer, P.
PDB entry 7b0z: Crystal Structure of human monoamine oxidase B in complex with (E)-3-phenyl-1-(4-(trifluoromethyl)phenyl)prop-2-en-1-one
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-11-23
Authors: Iacovino, L.G., Binda, C.
PDB entry 7b10: Crystal structure of MLLT1 YEATS domain T1 mutant in complex with benzimidazole-amide based compound 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2020-11-23
Authors: Chaikuad, A., Ni, X., Brennan, P.E., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b12: HUMAN IMMUNOPROTEASOME 20S PARTICLE IN COMPLEX WITH [2-(3-ethylphenyl)-1-[(2S)-3-phenyl-2-[(pyrazin-2-yl)formamido]propanamido]ethyl]boronic acid
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2020-11-23
Authors: Musil, D., Klein, M., Crosignani, S.
PDB entry 7b13: 14-3-3sigma in complex with SHN3pS542 phosphopeptide crystal structure
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2020-11-23
Authors: Soini, L., Leysen, S., Davis, J., Ottmann, C.
PDB entry 7b14: Nanobody E bound to Spike-RBD in a localized reconstruction
Classification: VIRAL PROTEIN
Source organism: Camelus bactrianus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2020-11-23
Authors: Hallberg, B.M., Das, H.
PDB entry 7b15: 14-3-3sigma in complex with SHN3pT869 phosphopeptide crystal structure
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2020-11-23
Authors: Soini, L., Leysen, S., Davis, J., Ottmann, C.
PDB entry 7b16: TRPC4 in complex with inhibitor GFB-9289
Classification: TRANSPORT PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2020-11-23
Authors: Vinayagam, D., Quentin, D., Sistel, O., Merino, F., Stabrin, M., Hofnagel, O., Ledeboer, M.W., Malojcic, G., Raunser, S.
PDB entry 7b17: SARS-CoV-spike RBD bound to two neutralising nanobodies.
Classification: VIRAL PROTEIN
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.01 Å
Deposited: 2020-11-23
Authors: Hallberg, B.M., Das, H.
PDB entry 7b18: SARS-CoV-spike bound to two neutralising nanobodies
Classification: VIRAL PROTEIN
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2020-11-24
Authors: Hallberg, B.M., Das, H.
PDB entry 7b19: Mutant Myosin-II-GGG motor domain
Classification: MOTOR PROTEIN
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-11-24
Authors: Ewert, W., Preller, M.
PDB entry 7b1a: Myosin-II-AA mutant motor domain
Classification: MOTOR PROTEIN
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-11-24
Authors: Ewert, W., Preller, M.
PDB entry 7b1b: Cryo-EM of Aedes Aegypti Toll5A dimer bound to Spz1C
Classification: IMMUNE SYSTEM
Source organism: Aedes aegypti
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.23 Å
Deposited: 2020-11-24
Authors: Gangloff, M., Hardwick, S.W., Chirgadze, D.Y.
PDB entry 7b1c: Cryo-EM of Aedes Aegypti Toll5A trimer bound to Spz1C
Classification: IMMUNE SYSTEM
Source organism: Aedes aegypti
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2020-11-24
Authors: Gangloff, M., Hardwick, S.W., Chirgadze, D.Y.
PDB entry 7b1d: Cryo-EM of Aedes Aegypti Toll5A
Classification: IMMUNE SYSTEM
Source organism: Aedes aegypti
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2020-11-24
Authors: Gangloff, M., Hardwick, S.W., Chirgadze, D.Y.
PDB entry 7b1e: BACE1 IN COMPLEX WITH compound 3 (NB-641)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2020-11-24
Authors: Rondeau, J.M., Wirth, E.
PDB entry 7b1f: Orthorhombic P212121 Structure of Human Mad1 C-terminal Domain in Complex with Phosphorylated Bub1 CD1 Domain
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-11-24
Authors: Fischer, E., Bellini, D., Barford, D.
PDB entry 7b1g: TRPC4 in complex with Calmodulin
Classification: TRANSPORT PROTEIN
Source organism: Danio rerio; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-11-24
Authors: Vinayagam, D., Quentin, D., Sistel, O., Merino, F., Stabrin, M., Hofnagel, O., Ledeboer, M.W., Malojcic, G., Raunser, S.
PDB entry 7b1h: Monoclinic P21 Structure of Human Mad1 C-terminal Domain in Complex with Phosphorylated Bub1 CD1 Domain
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-11-24
Authors: Fischer, E., Bellini, D., Barford, D.
PDB entry 7b1i: Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikF with the HMA domain of OsHIPP19 from rice (Oryza sativa)
Classification: PLANT PROTEIN
Source organism: Magnaporthe oryzae; Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-11-24
Authors: Maidment, J.H.R., Franceschetti, M., Banfield, M.J.
PDB entry 7b1j: Orthorhombic P21212 Structure of Human Mad1 C-terminal Domain in Complex with Phosphorylated Bub1 CD1 Domain
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-11-25
Authors: Fischer, E., Bellini, D., Barford, D.
PDB entry 7b1k: Crystal structure of phosphatidyl serine synthase (PSS) in the closed conformation with bound citrate.
Classification: LIPID BINDING PROTEIN
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-11-25
Authors: Yildiz, O., Centola, M.
PDB entry 7b1l: Crystal structure of phosphatidyl serine synthase (PSS) in the closed conformation with bound citrate.
Classification: LIPID BINDING PROTEIN
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-11-25
Authors: Yildiz, O., Centola, M.
PDB entry 7b1n: Crystal structure of phosphatidyl serine synthase (PSS) in the closed conformation with bound citrate.
Classification: LIPID BINDING PROTEIN
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-11-25
Authors: Yildiz, O., Centola, M.
PDB entry 7b1o: Crystal structure of the indoleamine 2,3-dioxygenase 1 (IDO1) in complex with compound 22
Classification: IMMUNOSUPPRESSANT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2020-11-25
Authors: Lammens, A., Krapp, S., Lewis, R.T., Hamilton, M.M.
PDB entry 7b1p: Crystal Structure of Human BACE-1 in Complex with Compound 38a (NB-854)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-11-25
Authors: Rondeau, J.M., Wirth, E.
PDB entry 7b1q: Crystal Structure of Human BACE-1 in Complex with Compound NB-360 (compound 54)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2020-11-25
Authors: Rondeau, J.M., Wirth, E.
PDB entry 7b1r: Crystal structure of B. subtilis glucose-1-phosphate uridylyltransferase YngB
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-11-25
Authors: Wu, C., Morgan, R.M.L., Freemont, P., Grundling, A.
PDB entry 7b1s: Crystal structure of the ethyl-coenzyme M reductase from Candidatus Ethanoperedens thermophilum at 0.994-A resolution
Classification: TRANSFERASE
Source organism: Candidatus Ethanoperedens thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 0.992 Å
Deposited: 2020-11-25
Authors: Wagner, T., Lemaire, O.N., Engilberge, S.
PDB entry 7b1t: Crystal structure of BRD4(1) in complex with the inhibitor MPM6
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2020-11-25
Authors: Huegle, M.
PDB entry 7b1u: Crystal structure of a shortened IpgC variant in complex with 3-(3,4-difluorophenyl)-1H,4H,6H,7H-imidazo[2,1-c][1,2,4]triazine
Classification: CHAPERONE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2020-11-25
Authors: Gardonyi, M., Heine, A., Klebe, G.
PDB entry 7b1v: DtxR-like iron-dependent regulator IdeR complexed with cobalt
Classification: TRANSCRIPTION
Source organism: Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2020-11-25
Authors: Maurer, D., Marcos-Torres, F.J., Griese, J.J.
PDB entry 7b1w: Crystal structure of plastidial ribulose epimerase RPE1 from the model alga Chlamydomonas reinhardtii
Classification: ISOMERASE
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.935 Å
Deposited: 2020-11-25
Authors: Henri, J., Zaffagnini, M., Tedesco, D., Crozet, P., Lemaire, S.D.
PDB entry 7b1x: Crystal structure of cold-active esterase PMGL3 from permafrost metagenomic library
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-11-25
Authors: Boyko, K.M., Nikolaeva, A.Y., Petrovskaya, L.E., Kryukova, M.V., Kryukova, E.A., Korzhenevsky, D.A., Lomakina, G.Y., Novototskaya-Vlasova, K.A., Rivkina, E.M., Dolgikh, D.A., Kirpichnikov, M.P., Popov, V.O.
PDB entry 7b1y: DtxR-like iron-dependent regulator IdeR complexed with cobalt and its consensus DNA-binding sequence
Classification: TRANSCRIPTION
Source organism: Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2020-11-25
Authors: Maurer, D., Marcos-Torres, F.J., Griese, J.J.
PDB entry 7b1z: Virulence-associated protein VapB from the intracellular pathogen Rhodococcus equi
Classification: TOXIN
Source organism: Rhodococcus hoagii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2020-11-25
Authors: Geerds, C., Niemann, H.H.
PDB entry 7b20: DtxR-like iron-dependent regulator IdeR complexed with iron and its consensus DNA-binding sequence
Classification: TRANSCRIPTION
Source organism: Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2020-11-25
Authors: Maurer, D., Marcos-Torres, F.J., Griese, J.J.
PDB entry 7b21: The X183 domain from Cellvibrio japonicus Cbp2D
Classification: ELECTRON TRANSPORT
Source organism: Cellvibrio japonicus (strain Ueda107)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-11-25
Authors: Branch, J., Hemsworth, G.R.
PDB entry 7b22: Vibrio cholerae ParD2 Antitoxin
Classification: DNA BINDING PROTEIN
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2020-11-25
Authors: Garcia-Rodriguez, G., Loris, R.
PDB entry 7b23: DtxR-like iron-dependent regulator IdeR complexed with cobalt and the SACE_2689 promoter DNA-binding sequence
Classification: TRANSCRIPTION
Source organism: Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-11-26
Authors: Maurer, D., Marcos-Torres, F.J., Griese, J.J.
PDB entry 7b24: DtxR-like iron-dependent regulator IdeR (P39G variant) complexed with cobalt and its consensus DNA-binding sequence
Classification: TRANSCRIPTION
Source organism: Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-11-26
Authors: Maurer, D., Marcos-Torres, F.J., Griese, J.J.
PDB entry 7b25: DtxR-like iron-dependent regulator IdeR (Q43A variant) complexed with cobalt and its consensus DNA-binding sequence
Classification: TRANSCRIPTION
Source organism: Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2020-11-26
Authors: Maurer, D., Marcos-Torres, F.J., Griese, J.J.
PDB entry 7b26: CirpA1 in complex with pseudo-monomeric Properdin lacking TSR2-3
Classification: IMMUNOSUPPRESSANT
Source organism: Homo sapiens; Rhipicephalus pulchellus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2020-11-26
Authors: Lea, S.M., Johnson, S., Braunger, K.
PDB entry 7b27: RBD domain SARS-CoV2 in complex with neutralizing nanobody NM1230
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.902 Å
Deposited: 2020-11-26
Authors: Ostertag, E., Zocher, G., Stehle, T.
PDB entry 7b28: Complement inhibitor CirpA3 from Rhipicephalus pulchellus
Classification: IMMUNOSUPPRESSANT
Source organism: Rhipicephalus pulchellus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-11-26
Authors: Lea, S.M., Johnson, S., Braunger, K.
PDB entry 7b29: Complement inhibitor CirpA4 from Rhipicephalus appendiculatus
Classification: IMMUNOSUPPRESSANT
Source organism: Rhipicephalus appendiculatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-11-26
Authors: Lea, S.M., Johnson, S., Braunger, K.
PDB entry 7b2a: Complement inhibitor CirpA5 from Rhipicephalus appendiculatus
Classification: IMMUNOSUPPRESSANT
Source organism: Rhipicephalus appendiculatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2020-11-26
Authors: Lea, S.M., Johnson, S., Braunger, K.
PDB entry 7b2b: Solution structure of a non-covalent extended docking domain complex of the Pax NRPS: PaxA T1-CDD/PaxB NDD
Classification: PROTEIN BINDING
Source organism: Xenorhabdus cabanillasii; Xenorhabdus cabanillasii JM26
Experimental method: SOLUTION NMR
Deposited: 2020-11-26
Authors: Watzel, J., Sarawi, S., Duchardt-Ferner, E., Bode, H.B., Woehnert, J.
PDB entry 7b2c: Crystal structure of the ethyl-coenzyme M reductase from Candidatus Ethanoperedens thermophilum gassed with xenon
Classification: TRANSFERASE
Source organism: Candidatus Ethanoperedens thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-11-26
Authors: Wagner, T., Lemaire, O.N., Engilberge, S.
PDB entry 7b2d: Complement inhibitor CirpA1 from Rhipicephalus pulchellus
Classification: IMMUNOSUPPRESSANT
Source organism: Rhipicephalus pulchellus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2020-11-26
Authors: Lea, S.M., Johnson, S., Braunger, K.
PDB entry 7b2e: quadruple mutant of oxalyl-CoA decarboxylase from Methylorubrum extorquens with bound TPP and ADP
Classification: LYASE
Source organism: Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-11-26
Authors: Pfister, P., Burgener, S., Nattermann, M., Zarzycki, J., Erb, T.J.
PDB entry 7b2f: Solution structure of the Pax NRPS docking domain PaxB NDD
Classification: PROTEIN BINDING
Source organism: Xenorhabdus cabanillasii JM26
Experimental method: SOLUTION NMR
Deposited: 2020-11-26
Authors: Watzel, J., Sarawi, S., Duchardt-Ferner, E., Bode, H.B., Woehnert, J.
PDB entry 7b2g: Crystal structure of R120Q GDAP1 mutant
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-11-26
Authors: Nguyen, G.T.T., Sutinen, A., Kursula, P.
PDB entry 7b2h: Crystal structure of the methyl-coenzyme M reductase from Methanothermobacter Marburgensis derivatized with xenon
Classification: TRANSFERASE
Source organism: Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2020-11-27
Authors: Wagner, T., Lemaire, O.N., Engilberge, S.
PDB entry 7b2i: Heterodimeric tRNA-Guanine Transglycosylase from mouse
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-11-27
Authors: Sebastiani, M., Heine, A., Reuter, K.
PDB entry 7b2j: Crystal Structure of SARS-CoV-2 main protease (Nsp5) in complex with compound 5
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-11-27
Authors: Talibov, V.O.
PDB entry 7b2k: Structure of the M298F mutant of the Streptomyces coelicolor small laccase T1 copper axial ligand.
Classification: OXIDOREDUCTASE
Source organism: Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-11-27
Authors: Zovo, K., Majumdar, S., Lukk, T.
PDB entry 7b2l: Structure of the endocytic adaptor complex AENTH
Classification: CELL ADHESION
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-11-27
Authors: Klebl, D.P., Lizarrondo, J., Sobott, F., Garcia-Alai, M., Muench, S.P.
PDB entry 7b2m: Cryo-EM structure of complement C4b in complex with nanobody E3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2020-11-27
Authors: Oosterheert, W., De la O Becerra, K.I., van den Bos, R.M., Gros, P.
PDB entry 7b2n: Crystal structure of Chlamydomonas reinhardtii chloroplastic Fructose bisphosphate aldolase
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2020-11-27
Authors: Le Moigne, T., Lemaire, S.D., Henri, J.
PDB entry 7b2o: Crystal structure of Chlamydomonas reinhardtii chloroplastic sedoheptulose-1,7-bisphosphatase
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2020-11-27
Authors: Le Moigne, T., Lemaire, S.D., Henri, J.
PDB entry 7b2p: Cryo-EM structure of complement C4b in complex with nanobody B5
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2020-11-27
Authors: Oosterheert, W., De la O Becerra, K.I., Gros, P.
PDB entry 7b2q: Cryo-EM structure of complement C4b in complex with nanobody B12
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.76 Å
Deposited: 2020-11-27
Authors: Oosterheert, W., De la O Becerra, K.I., Gros, P.
PDB entry 7b2r: Crystal structure of NHL domain of TRIM2
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-11-27
Authors: Chaikuad, A., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b2s: Crystal structure of SPRY domain of TRIM9
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-11-27
Authors: Chaikuad, A., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b2t: Crystal structure of Iripin-5 serpin from Ixodes ricinus
Classification: HYDROLASE INHIBITOR
Source organism: Ixodes scapularis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-11-27
Authors: Kascakova, B., Kuta Smatanova, I.
PDB entry 7b2u: Crystal Structure of SARS-CoV-2 main protease (Nsp5) in complex with compound 1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-11-27
Authors: Talibov, V.O.
PDB entry 7b2v: Notum complex with ARUK3003906
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2020-11-28
Authors: Zhao, Y., Jone, E.Y.
PDB entry 7b2w: Torpedo californica acetylcholinesterase complexed with UO2
Classification: HYDROLASE
Source organism: Tetronarce californica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-11-28
Authors: Silman, I., Shnyrov, V.L., Ashani, Y., Roth, E., Nicolas, A., Sussman, J.L., Weiner, L.
PDB entry 7b2x: Crystal structure of human 5' exonuclease Appollo H61Y variant
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2020-11-28
Authors: Newman, J.A., Baddock, H.T., Mukhopadhyay, S.M.M., Burgess-Brown, N.A., von Delft, F., Arrowshmith, C.H., Edwards, A., Bountra, C., Gileadi, O.
PDB entry 7b2y: Notum complex with ARUK3003910
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2020-11-28
Authors: Zhao, Y., Jone, E.Y.
PDB entry 7b2z: Notum complex with ARUK3003907
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2020-11-28
Authors: Zhao, Y., Jone, E.Y.
PDB entry 7b30: MST3 in complex with compound G-5555
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-11-28
Authors: Tesch, R., Rak, M., Joerger, A.C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b31: MST3 in complex with compound MRIA9
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-11-28
Authors: Tesch, R., Rak, M., Joerger, A.C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b32: MST3 in complex with MRIA7
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-11-28
Authors: Tesch, R., Rak, M., Joerger, A.C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b33: MST3 in complex with MRIA11
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-11-28
Authors: Tesch, R., Rak, M., Joerger, A.C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b34: MST3 in complex with compound MRIA12
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-11-28
Authors: Tesch, R., Rak, M., Joerger, A.C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b35: MST3 in complex with compound MRIA13
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.40005 Å
Deposited: 2020-11-28
Authors: Tesch, R., Rak, M., Joerger, A.C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b36: MST4 in complex with compound G-5555
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.10681 Å
Deposited: 2020-11-28
Authors: Tesch, R., Rak, M., Joerger, A.C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 7b37: Notum complex with ARUK3003718
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2020-11-28
Authors: Zhao, Y., Jone, E.Y.
PDB entry 7b38: Torpedo californica acetylcholinesterase complexed with Mg+2
Classification: HYDROLASE
Source organism: Tetronarce californica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-11-29
Authors: Silman, I., Shnyrov, V.L., Ashani, Y., Roth, E., Nicolas, A., Sussman, J.L., Weiner, L.
PDB entry 7b39: Allene-Based Design of a Noncalcemic Vitamin D Receptor Agonist
Classification: GENE REGULATION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2020-11-29
Authors: Rochel, N.
PDB entry 7b3a: Crystal structure of PamZ
Classification: TRANSFERASE
Source organism: Paenibacillus larvae subsp. larvae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2020-11-30
Authors: Loll, B., Dang, T., Mainz, A., Suessmuth, R., Wahl, M.C.
PDB entry 7b3b: Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with Remdesivir at position -3 (structure 1)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-11-30
Authors: Kokic, G., Hillen, H.S., Tegunov, D., Dienemann, C., Seitz, F., Schmitzova, J., Farnung, L., Siewert, A., Hoebartner, C., Cramer, P.
PDB entry 7b3c: Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with Remdesivir at position -4 (structure 2)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-11-30
Authors: Kokic, G., Hillen, H.S., Tegunov, D., Dienemann, C., Seitz, F., Schmitzova, J., Farnung, L., Siewert, A., Hoebartner, C., Cramer, P.
PDB entry 7b3d: Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with AMP at position -4 (structure 3)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-11-30
Authors: Kokic, G., Hillen, H.S., Tegunov, D., Dienemann, C., Seitz, F., Schmitzova, J., Farnung, L., Siewert, A., Hoebartner, C., Cramer, P.
PDB entry 7b3e: Crystal structure of myricetin covalently bound to the main protease (3CLpro/Mpro) of SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-11-30
Authors: Costanzi, E., Demitri, N., Giabbai, B., Storici, P.
PDB entry 7b3f: Notum S232A in complex with ARUK3003718
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2020-11-30
Authors: Zhao, Y., Jone, E.Y.
PDB entry 7b3g: Notum complex with ARUK3003902
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2020-11-30
Authors: Zhao, Y., Jone, E.Y.
PDB entry 7b3h: Notum complex with ARUK3003909
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2020-11-30
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 7b3i: Notum complex with ARUK3003776
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2020-12-01
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 7b3j: Dynamic complex between all-D-enantiomeric peptide D3 with wild-type amyloid precursor protein 672-726 fragment (amyloid beta 1-55)
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2020-12-01
Authors: Bocharov, E.V., Volynsky, P.E., Okhrimenko, I.S., Urban, A.S.
PDB entry 7b3k: Dynamic complex between all-D-enantiomeric peptide D3 with L723P mutant of amyloid precursor protein (APP) 672-726 fragment (amyloid beta 1-55)
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2020-12-01
Authors: Bocharov, E.V., Volynsky, P.E., Okhrimenko, I.S., Urban, A.S.
PDB entry 7b3m: MEK1 in complex with compound 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-12-01
Authors: Kack, H., Oster, L.
PDB entry 7b3n: AmiP amidase-3 from Thermus parvatiensis
Classification: HYDROLASE
Source organism: Thermus parvatiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.793 Å
Deposited: 2020-12-01
Authors: Freitag-Pohl, S., Pohl, E.
PDB entry 7b3o: Crystal structure of the SARS-CoV-2 RBD in complex with STE90-C11 Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-12-01
Authors: Kluenemann, T., Van den Heuvel, J.
PDB entry 7b3p: Notum complex with ARUK3003775
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2020-12-01
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 7b3q: Crystal structure of c-MET bound by compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-12-01
Authors: Collie, G.W.
PDB entry 7b3r: OXA-10 beta-lactamase with S64Dha modification and lysinoalanine crosslink
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-12-01
Authors: Lang, P.A., Brem, J., Schofield, C.J.
PDB entry 7b3s: OXA-10 beta-lactamase with S67Dha modification
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-12-01
Authors: Lang, P.A., Brem, J., Schofield, C.J.
PDB entry 7b3t: Crystal structure of c-MET bound by compound 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2020-12-01
Authors: Collie, G.W.
PDB entry 7b3u: OXA-10 beta-lactamase with covalent modification
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.598 Å
Deposited: 2020-12-01
Authors: Lang, P.A., Brem, J., Schofield, C.J.
PDB entry 7b3v: Crystal structure of c-MET bound by compound 3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2020-12-01
Authors: Collie, G.W.
PDB entry 7b3w: Crystal structure of c-MET bound by compound 4
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2020-12-01
Authors: Collie, G.W.
PDB entry 7b3x: Notum complex with ARUK3003748
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2020-12-01
Authors: Fish, P., Jones, E.Y.
PDB entry 7b3y: Structure of a nanoparticle for a COVID-19 vaccine candidate
Classification: VIRUS LIKE PARTICLE
Source organism: Streptococcus pyogenes serotype M49 (strain NZ131); Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-12-01
Authors: Duyvesteyn, H.M.E., Stuart, D.I.
PDB entry 7b3z: Crystal structure of c-MET bound by compound 5
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-12-01
Authors: Collie, G.W.
PDB entry 7b40: Crystal structure of c-MET bound by compound 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2020-12-01
Authors: Collie, G.W.
PDB entry 7b41: Crystal structure of c-MET bound by compound 7
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2020-12-02
Authors: Collie, G.W.
PDB entry 7b42: Crystal structure of c-MET bound by compound 8
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-12-02
Authors: Collie, G.W.
PDB entry 7b43: Crystal structure of c-MET bound by compound 9
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2020-12-02
Authors: Collie, G.W.
PDB entry 7b44: Crystal structure of c-MET bound by compound S1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2020-12-02
Authors: Collie, G.W.
PDB entry 7b45: Notum complex with ARUK3003934
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2020-12-02
Authors: Fish, P., Jones, E.Y.
PDB entry 7b46: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human wild-type p53DBD bound to DNA and MQ: wt-DNA-MQ (P1)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2020-12-02
Authors: Degtjarik, O., Rozenberg, H., Shakked, Z.
PDB entry 7b47: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R273H mutant bound to MQ: R273H-MQ (I)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-12-02
Authors: Degtjarik, O., Rozenberg, H., Shakked, Z.
PDB entry 7b48: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R273H mutant bound to MQ: R273H-MQ (II)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-12-02
Authors: Degtjarik, O., Rozenberg, H., Shakked, Z.
PDB entry 7b49: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R273H mutant bound to DNA and MQ: R273H-DNA-MQ
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2020-12-02
Authors: Rozenberg, H., Degtjarik, O., Shakked, Z.
PDB entry 7b4a: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R273H mutant bound to DNA: R273H-DNA
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-12-02
Authors: Golovenko, D., Rozenberg, H., Degtjarik, O., Shakked, Z.
PDB entry 7b4b: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R273C mutant bound to MQ: R273C-MQ (I)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2020-12-02
Authors: Degtjarik, O., Rozenberg, H., Shakked, Z.
PDB entry 7b4c: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R273C mutant bound to MQ: R273C-MQ (II)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2020-12-02
Authors: Degtjarik, O., Rozenberg, H., Shakked, Z.
PDB entry 7b4d: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R273C/S240R double mutant bound to DNA and MQ: R273C/S240R-DNA-MQ
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-12-02
Authors: Rozenberg, H., Diskin-Posner, Y., Degtjarik, O., Shakked, Z.
PDB entry 7b4e: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R282W mutant bound to DNA and MQ: R282W-DNA-MQ
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-12-02
Authors: Degtjarik, O., Rozenberg, H., Shakked, Z.
PDB entry 7b4f: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R282W mutant bound to DNA: R282W-MQ (I)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2020-12-02
Authors: Rozenberg, H., Degtjarik, O., Shakked, Z.
PDB entry 7b4g: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human p53DBD-R282W mutant bound to DNA: R282W-MQ (II)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2020-12-02
Authors: Degtjarik, O., Rozenberg, H., Shakked, Z.
PDB entry 7b4h: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human wild-type p53DBD bound to DNA and MQ: wt-DNA-MQ (III)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2020-12-02
Authors: Degtjarik, O., Rozenberg, H., Diskin-Posner, Y., Shakked, Z.
PDB entry 7b4i: Thermostable omega transaminase PjTA-R6 variant W58G engineered for asymmetric synthesis of enantiopure bulky amines
Classification: TRANSFERASE
Source organism: Pseudomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-12-02
Authors: Capra, N., Rozeboom, H.J., Thunnissen, A.M.W.H., Janssen, D.B.
PDB entry 7b4j: Thermostable omega transaminase PjTA-R6 variant W58M/F86L/R417L engineered for asymmetric synthesis of enantiopure bulky amines
Classification: TRANSFERASE
Source organism: Pseudomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-12-02
Authors: Capra, N., Rozeboom, H.J., Thunnissen, A.M.W.H., Janssen, D.B.
PDB entry 7b4l: CryoEM structure of the human sodium proton exchanger NHA2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-12-02
Authors: Woehlert, D., Kuhlbrandt, W., Yildiz, O.
PDB entry 7b4m: CryoEM structure of the human sodium proton exchanger NHA2 in nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.2 Å
Deposited: 2020-12-02
Authors: Woehlert, D., Kuhlbrandt, W., Yildiz, O.
PDB entry 7b4n: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human wild-type p53DBD bound to DNA and MQ: wt-DNA-MQ (II)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2020-12-02
Authors: Rozenberg, H., Diskin-Posner, Y., Degtjarik, O., Shakked, Z.
PDB entry 7b4o: A Bacteroidetes bacterium CuZn-superoxide dismutase with ZnZn metalation
Classification: OXIDOREDUCTASE
Source organism: Bacteroidetes bacterium GWA2_30_7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2020-12-02
Authors: Wright, G.S.A.
PDB entry 7b4p: A Bacteroidetes bacterium CuZn-superoxide dismutase with CuZn metalation
Classification: OXIDOREDUCTASE
Source organism: Bacteroidetes bacterium GWA2_30_7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-12-02
Authors: Wright, G.S.A.