LiteFold/PDB huggingface dataset:
PDB entry 4jv4: Crystal Structure of RIalpha(91-379) bound to HE33, a N6 di-propyl substituted cAMP analog
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.952 Å
Deposited: 2013-03-25
Authors: Brown, S.H.J., Cheng, C.Y., Saldanha, A.S., Wu, J., Cottam, H., Sankaran, B., Taylor, S.S.
PDB entry 4jv5: Crystal structures of pseudouridinilated stop codons with ASLs
Classification: RIBOSOME
Source organism: Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.162 Å
Deposited: 2013-03-25
Authors: Fernandez, I.S., Ng, C.L., Kelley, A.C., Guowei, W., Yu, Y.T., Ramakrishnan, V.
PDB entry 4jv6: The crystal structure of PDE6D in complex to inhibitor-1
Classification: Protein binding/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2013-03-25
Authors: Gunther, Z., Papke, B., Ismail, S., Vartak, N., Chandra, A., Hoffmann, M., Hahn, S., Triola, G., Wittinghofer, A., Bastiaens, P., Waldmann, H.
PDB entry 4jv7: Co-crystal structure of MDM2 with inhibitor (2S,5R,6S)-2-benzyl-5,6-bis(4-bromophenyl)-4-methylmorpholin-3-one
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-25
Authors: Huang, X., Gonzalez-Lopez de Turiso, F., Sun, D., Yosup, R., Bartberger, M.D., Beck, H.P., Cannon, J., Shaffer, P., Oliner, J.D., Olson, S.H., Medina, J.C.
PDB entry 4jv8: The crystal structure of PDE6D in complex with rac-S1
Classification: Protein binding/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2013-03-25
Authors: Gunther, Z., Papke, B., Ismail, S., Vartak, N., Chandra, A., Hoffmann, M., Hahn, S., Triola, G., Wittinghofer, A., Bastiaens, P., Waldmann, H.
PDB entry 4jv9: Co-crystal structure of MDM2 with inhibitor (2S,5R,6S)-2-benzyl-5,6-bis(4-chlorophenyl)-4-methylmorpholin-3-one
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-25
Authors: Huang, X., Gonzalez-Lopez de Turiso, F., Sun, D., Yosup, R., Bartberger, M.D., Beck, H.P., Cannon, J., Shaffer, P., Oliner, J.D., Olson, S.H., Medina, J.C.
PDB entry 4jva: Crystal Structure of RIIbeta(108-402) bound to HE33, a N6 di-propyl substituted cAMP analog
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-25
Authors: Brown, S.H.J., Cheng, C.Y., Saldanha, A.S., Wu, J., Cottam, H., Sankaran, B., Taylor, S.S.
PDB entry 4jvb: Crystal structure of PDE6D in complex with the inhibitor rac-2
Classification: Protein binding/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-03-25
Authors: Gunther, Z., Papke, B., Ismail, S., Vartak, N., Chandra, A., Hoffmann, M., Hahn, S., Triola, G., Wittinghofer, A., Bastiaens, P., Waldmann, H.
PDB entry 4jvc: Crystal structure of PqsR co-inducer binding domain
Classification: TRANSCRIPTION REGULATOR
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-25
Authors: Ilangovan, A., Emsley, J., Williams, P.
PDB entry 4jvd: Crystal structure of PqsR coinducer binding domain of Pseudomonas aeruginosa with ligand NHQ
Classification: TRANSCRIPTION REGULATOR
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2013-03-25
Authors: Ilangovan, A., Emsley, J., Williams, P.
PDB entry 4jve: Co-crystal structure of MDM2 with inhibitor (2R,3E)-2-[(2S,3R,6S)-2,3-bis(4-chlorophenyl)-6-(4-fluorobenzyl)-5-oxomorpholin-4-yl]pent-3-enoic acid
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-03-25
Authors: Huang, X., Gonzalez-Lopez de Turiso, F., Sun, D., Yosup, R., Bartberger, M.D., Beck, H.P., Cannon, J., Shaffer, P., Oliner, J.D., Olson, S.H., Medina, J.C.
PDB entry 4jvf: The Crystal structure of PDE6D in complex with the inhibitor (s)-5
Classification: Protein binding/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-25
Authors: Gunther, Z., Papke, B., Ismail, S., Vartak, N., Chandra, A., Hoffmann, M., Hahn, S., Triola, G., Wittinghofer, A., Bastiaens, P., Waldmann, H.
PDB entry 4jvg: B-Raf Kinase in Complex with Birb796
Classification: Transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2013-03-25
Authors: Lavoie, H., Thevakumaran, N., Gavory, G., Li, J., Padeganeh, A., Guiral, S., Duchaine, J., Mao, D.Y.L., Bouvier, M., Sicheri, F., Therrien, M.
PDB entry 4jvh: Structure of the star domain of quaking protein in complex with RNA
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.501 Å
Deposited: 2013-03-25
Authors: Teplova, M., Hafner, M., Teplov, D., Essig, K., Tuschl, T., Patel, D.J.
PDB entry 4jvi: Crystal structure of PqsR co-inducer binding domain of Pseudomonas aeruginosa with inhibitor 3NH2-7Cl-C9QZN
Classification: TRANSCRIPTION REGULATOR/INHIBITOR
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-03-25
Authors: Ilangovan, A., Williams, P., Emsley, J.
PDB entry 4jvj: Crystal structure of human FPPS in complex with magnesium, CL01131, and sulfate
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-03-25
Authors: Park, J., Leung, C.-Y., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 4jvl: Crystal structure of human estrogen sulfotransferase (SULT1E1) in complex with inactive cofactor PAP and estradiol (E2)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.943 Å
Deposited: 2013-03-25
Authors: Gosavi, R.A., Knudsen, G.A., Birnbaum, L.S., Pedersen, L.C.
PDB entry 4jvm: Crystal structure of human estrogen sulfotransferase (SULT1E1) in complex with inactive cofactor PAP and brominated flame retardant TBBPA (tetrabromobisphenol A)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.994 Å
Deposited: 2013-03-25
Authors: Gosavi, R.A., Knudsen, G.A., Birnbaum, L.S., Pedersen, L.C.
PDB entry 4jvn: Crystal structure of human estrogen sulfotransferase (SULT1E1) in complex with inactive cofactor PAP and metabolite of brominated flame retardant 3OH BDE47 (3-hydroxyl bromodiphenyl ether)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-03-25
Authors: Gosavi, R.A., Knudsen, G.A., Birnbaum, L.S., Pedersen, L.C.
PDB entry 4jvo: Crystal structure of the double mutant (S112A, H303A) of B.anthracis mycrocine immunity protein (MccF) with alanyl sulfamoyl adenylates
Classification: IMMUNE SYSTEM
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-03-25
Authors: Nocek, B., Tikhonov, A., Severinov, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4jvp: Three dimensional structure of broadly neutralizing anti - Hepatitis C virus (HCV) glycoprotein E2 alpaca nanobody D03
Classification: IMMUNE SYSTEM
Source organism: Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2013-03-26
Authors: Krey, T., Rey, F.A.
PDB entry 4jvq: Crystal structure of hcv ns5b polymerase in complex with compound 9
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-26
Authors: Coulombe, R.
PDB entry 4jvr: Co-crystal structure of MDM2 with inhibitor (2'S,3R,4'S,5'R)-N-(2-aminoethyl)-6-chloro-4'-(3-chloro-2-fluorophenyl)-2'-(2,2-dimethylpropyl)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxamide
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-03-26
Authors: Huang, X., Gonzalez-Lopez de Turiso, F., Sun, D., Yosup, R., Bartberger, M.D., Beck, H.P., Cannon, J., Shaffer, P., Oliner, J.D., Olson, S.H., Medina, J.C.
PDB entry 4jvs: Crystal structure of LepB GAP domain from Legionella drancourtii in complex with Rab1-GDP and AlF3
Classification: HYDROLASE ACTIVATOR/PROTEIN TRANSPORT
Source organism: Homo sapiens; Legionella drancourtii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.783 Å
Deposited: 2013-03-26
Authors: Yu, Q., Yao, Q., Wang, D.-C., Shao, F.
PDB entry 4jvt: Crystal structure of Tfu_1878, a putative enoyl-CoA hydratase fromThermobifida fusca YX in complex with CoA
Classification: LYASE
Source organism: Thermobifida fusca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-03-26
Authors: Mikolajczak, K., Porebski, P.J., Cooper, D.R., Ahmed, M., Stead, M., Hillerich, B., Seidel, R., Zimmerman, M., Bonanno, J.B., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jvu: IgM C2-domain from mouse
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-03-26
Authors: Mueller, R., Graewert, A.M., Kern, T., Madl, T., Peschek, J., Sattler, M., Groll, M., Buchner, J.
PDB entry 4jvv: Crystal structure of the evolved variant of the computationally designed serine hydrolase, OSH55.4_H1, covalently bound with diisopropyl fluorophosphate (DFP), Northeast Structural Genomics Consortium (NESG) Target OR273
Classification: Structural Genomics, Unknown Function
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.288 Å
Deposited: 2013-03-26
Authors: Kuzin, A., Lew, S., Rajagopalan, S., Seetharaman, J., Tong, S., Everett, J.K., Acton, T.B., Baker, D., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 4jvw: IgM C4-domain from mouse
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-26
Authors: Mueller, R., Graewert, A.M., Kern, T., Madl, T., Peschek, J., Sattler, M., Groll, M., Buchner, J.
PDB entry 4jvy: Structure of the STAR (signal transduction and activation of RNA) domain of GLD-1 bound to RNA
Classification: RNA BINDING PROTEIN
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.853 Å
Deposited: 2013-03-26
Authors: Teplova, M., Hafner, M., Teplov, D., Essig, K., Tuschl, T., Patel, D.J.
PDB entry 4jvz: Structure of Thermosynechococcus elongatus CcmL
Classification: STRUCTURAL PROTEIN
Source organism: Thermosynechococcus elongatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2013-03-26
Authors: Sutter, M., Kerfeld, C.A.
PDB entry 4jw0: Structure of Gloeobacter violaceus CcmL
Classification: STRUCTURAL PROTEIN
Source organism: Gloeobacter violaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-03-26
Authors: Sutter, M., Kerfeld, C.A.
PDB entry 4jw1: Crystal structure of N-terminal 618-residue fragment of LepB from Legionella pneumophila
Classification: HYDROLASE ACTIVATOR
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2013-03-26
Authors: Hu, L., Yao, Q., Zhu, Y., Shao, F.
PDB entry 4jw2: Selection of specific protein binders for pre-defined targets from an optimized library of artificial helicoidal repeat proteins (alphaRep)
Classification: DE NOVO PROTEIN/protein binding
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-27
Authors: Guellouz, A., Valerio-Lepiniec, M., Urvoas, A., Chevrel, A., Graille, M., Fourati-Kammoun, Z., Desmadril, M., van Tilbeurgh, H., Minard, P.
PDB entry 4jw3: Selection of specific protein binders for pre-defined targets from an optimized library of artificial helicoidal repeat proteins (alphaRep)
Classification: DNA binding protein/de novo protein
Source organism: Streptomyces malayensis; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-03-27
Authors: Guellouz, A., Valerio-Lepiniec, M., Urvoas, A., Chevrel, A., Graille, M., Fourati-Kammoun, Z., Desmadril, M., van Tilbeurgh, H., Minard, P.
PDB entry 4jwc: Crystal structure of the substrate binding domain of E.coli DnaK in complex with bovine Bac7(1-16)
Classification: CHAPERONE/Antibiotic
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-27
Authors: Zahn, M., Straeter, N.
PDB entry 4jwd: Crystal structure of the substrate binding domain of E.coli DnaK in complex with bovine Bac7(15-28)
Classification: CHAPERONE/Antibiotic
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-03-27
Authors: Zahn, M., Straeter, N.
PDB entry 4jwe: Crystal structure of the substrate binding domain of E.coli DnaK in complex with sheep Bac7(1-21)
Classification: CHAPERONE/Antibiotic
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-03-27
Authors: Zahn, M., Straeter, N.
PDB entry 4jwf: Crystal structure of spTrm10(74)-SAH complex
Classification: TRANSFERASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-27
Authors: Yan, W., Shao, Z.
PDB entry 4jwg: Crystal structure of spTrm10(74)
Classification: TRANSFERASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-27
Authors: Yan, W., Shao, Z.
PDB entry 4jwh: Crystal structure of spTrm10(Full length)-SAH complex
Classification: TRANSFERASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2013-03-27
Authors: Yan, W., Shao, Z.
PDB entry 4jwi: Crystal structure of the substrate binding domain of E.coli DnaK in complex with sheep Bac7(35-43)
Classification: CHAPERONE/ANTIBIOTIC
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-27
Authors: Zahn, M., Straeter, N.
PDB entry 4jwj: Crystal structure of scTrm10(84)-SAH complex
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2013-03-27
Authors: Yan, W., Shao, Z.
PDB entry 4jwk: Crystal structure of the complex of peptidyl-tRNA hydrolase from Acinetobacter baumannii with cytidine at 1.87 A resolution
Classification: HYDROLASE
Source organism: Acinetobacter baumannii ATCC 19606 = CIP 70.34
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2013-03-27
Authors: Kaushik, S., Singh, N., Yamini, S., Singh, A., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4jwl: Complexe of ARNO Sec7 domain with the protein-protein interaction inhibitor N-(4-hydroxy-2,6-dimethylphenyl)benzenesulfonamide at pH7.5
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-03-27
Authors: Hoh, F., Rouhana, J.
PDB entry 4jwm: Ternary complex of D256E mutant of DNA Polymerase Beta
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-27
Authors: Batra, V.K., Perera, L., Ping, L., Shock, D.D., Beard, W.A., Pedersen, L.C., Pedersen, L.G., Wilson, S.H.
PDB entry 4jwn: Ternary complex of D256A mutant of DNA Polymerase Beta
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2013-03-27
Authors: Batra, V.K., Perera, L., Ping, L., Shock, D.D., Beard, W.A., Pedersen, L.C., Pedersen, L.G., Wilson, S.H.
PDB entry 4jwo: The crystal structure of a possible phosphate binding protein from Planctomyces limnophilus DSM 3776
Classification: Phosphate binding protein
Source organism: Planctomyces limnophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.601 Å
Deposited: 2013-03-27
Authors: Tan, K., Gu, M., Endres, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4jwp: Crystal structure of Ribosomal-protein-alanine N-acetyltransferase from Brucella melitensis in complex with Acetyl CoA
Classification: TRANSFERASE
Source organism: Brucella abortus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-27
Authors: SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4jwq: Crystal Structure of the Calcium Binding Domain of CDPK3 from Plasmodium Berghei, PB000947.00
Classification: TRANSFERASE
Source organism: Plasmodium berghei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-03-27
Authors: Wernimont, A.K., Loppnau, P., Lin, Y.H., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Hui, R., Mottaghi, K., Structural Genomics Consortium (SGC)
PDB entry 4jwr: Co-crystal structure of MDM2 with inhibitor {(2S,5R,6S)-6-(3-chlorophenyl)-5-(4-chlorophenyl)-4-[(2S)-1-hydroxybutan-2-yl]-3-oxomorpholin-2-yl}acetic acid
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-03-27
Authors: Shaffer, P.L.
PDB entry 4jws: Crystal structure of Cytochrome P450cam-putidaredoxin complex
Classification: OXIDOREDUCTASE/ELECTRON TRANSPORT
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-03-27
Authors: Tripathi, S.M., Li, H., Poulos, T.L.
PDB entry 4jwt: Crystal structure of a putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Sulfurimonas denitrificans DSM 1251 (Target NYSGRC-029304 )
Classification: HYDROLASE
Source organism: Sulfurimonas denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-03-27
Authors: Sampathkumar, P., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jwu: Crystal structure of Cytochrome P450cam-putidaredoxin complex
Classification: OXIDOREDUCTASE/ELECTRON TRANSPORT
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-27
Authors: Tripathi, S.M., Li, H., Poulos, T.L.
PDB entry 4jwv: Crystal Structure of putative short chain enoyl-CoA hydratase from Novosphingobium aromaticivorans DSM 12444
Classification: LYASE
Source organism: Novosphingobium aromaticivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-03-27
Authors: Cooper, D.R., Mikolajczak, K., Cymborowski, M., Grabowski, M., Ahmed, M., Stead, M., Hillerich, B., Seidel, R., Zimmerman, M., Bonanno, J.B., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jwx: GluN2A ligand-binding core in complex with propyl-NHP5G
Classification: UNKNOWN FUNCTION
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-03-27
Authors: Hansen, K.B., Tajima, N., Risgaard, R., Perszyk, R.E., Jorgensen, L., Vance, K.M., Ogden, K.K., Clausen, R.P., Furukawa, H., Traynelis, S.F.
PDB entry 4jwy: GluN2D ligand-binding core in complex with propyl-NHP5G
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-27
Authors: Hansen, K.B., Tajima, N., Risgaard, R., Perszyk, R.E., Jorgensen, L., Vance, K.M., Ogden, K.K., Clausen, R.P., Furukawa, H., Traynelis, S.F.
PDB entry 4jx0: Crystal structure of a two domain protein with unknown function (BF3416) from Bacteroides fragilis NCTC 9343 at 2.90 A resolution
Classification: Structural Genomics, Unknown Function
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-03-27
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4jx1: Crystal structure of reduced Cytochrome P450cam-putidaredoxin complex bound to camphor and 5-exo-hydroxycamphor
Classification: OXIDOREDUCTASE/ELECTRON TRANSPORT
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.087 Å
Deposited: 2013-03-27
Authors: Tripathi, S.M., Li, H., Poulos, T.L.
PDB entry 4jx2: Crystal structure of a putative secreted protein (lpg1979) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1 at 2.65 A resolution
Classification: Structural Genomics, Unknown Function
Source organism: Legionella pneumophila subsp. pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2013-03-27
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4jx3: Crystal structure of Pim1 kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-27
Authors: Lee, S.J., Han, B.G., Cho, J.W., Choi, J.S., Lee, J.K., Song, H.J., Koh, J.S., Lee, B.I.
PDB entry 4jx4: Structure of the carboxyl transferase domain from Rhizobium etli pyruvate carboxylase
Classification: Ligase,transferase
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2013-03-27
Authors: Lietzan, A.D., St Maurice, M.
PDB entry 4jx5: Structure of the carboxyl transferase domain from Rhizobium etli pyruvate carboxylase with pyruvate
Classification: Ligase,transferase
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2013-03-27
Authors: Lietzan, A.D., St Maurice, M.
PDB entry 4jx6: Structure of the carboxyl transferase domain Y628A from Rhizobium etli pyruvate carboxylase with pyruvate
Classification: Ligase,transferase
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2013-03-27
Authors: Lietzan, A.D., St Maurice, M.
PDB entry 4jx7: Crystal structure of Pim1 kinase in complex with inhibitor 2-[(trans-4-aminocyclohexyl)amino]-4-{[3-(trifluoromethyl)phenyl]amino}pyrido[4,3-d]pyrimidin-5(6H)-one
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-27
Authors: Lee, S.J., Han, B.G., Cho, J.W., Choi, J.S., Lee, J.K., Song, H.J., Koh, J.S., Lee, B.I.
PDB entry 4jx8: Crystal Structure of E.coli Enoyl Reductase in Complex with NAD and AEA16
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2013-03-28
Authors: Subramanya, H., Rao, K.N., Anirudha, L.
PDB entry 4jx9: Crystal structure of the complex of peptidyl t-RNA hydrolase from Acinetobacter baumannii with uridine at 1.4A resolution
Classification: HYDROLASE
Source organism: Acinetobacter baumannii ATCC 19606 = CIP 70.34
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-03-28
Authors: Kaushik, S., Singh, N., Yamini, S., Singh, A., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4jxb: RipD (Rv1566c) from Mycobacterium tuberculosis: a non-catalytic NlpC/p60 domain protein, adaptation to peptidoglycan-binding function
Classification: CELL INVASION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2013-03-28
Authors: Both, D., Steiner, E.M., Schnell, R., Schneider, G.
PDB entry 4jxc: X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-03-28
Authors: Nicolet, Y., Rohac, R., Martin, L., Fontecilla-Camps, J.C.
PDB entry 4jxe: Crystal structure of Schizosaccharomyces pombe sst2 catalytic domain
Classification: HYDROLASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.451 Å
Deposited: 2013-03-28
Authors: Shrestha, R.K., Das, C.
PDB entry 4jxf: Crystal Structure of PLK4 Kinase with an inhibitor: 400631 ((1R,2S)-2-{3-[(E)-2-{4-[(DIMETHYLAMINO)METHYL]PHENYL}ETHENYL]-2H-INDAZOL-6-YL}-5'-METHOXYSPIRO[CYCLOPROPANE-1,3'-INDOL]-2'(1'H)-ONE)
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-28
Authors: Qiu, W., Plotnikova, O., Feher, M., Awrey, D.E., Chirgadze, N.Y.
PDB entry 4jxg: Crystal Structure of AmpC beta-lactamase from E. coli in Complex with Oxacillin
Classification: hydrolase/antibiotic
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-03-28
Authors: Wallar, B.J., Powers, R.A., Docter, B.E.
PDB entry 4jxh: Complexe of ARNO Sec7 domain with the protein-protein interaction inhibitor N-(4-hydroxy-2,6-dimethylphenyl)benzenesulfonamide at pH 8.5
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2013-03-28
Authors: Hoh, F., Rouhana, J.
PDB entry 4jxi: Directed evolution and rational design of a de novo designed esterase toward improved catalysis. Northeast Structural Genomics Consortium (NESG) Target OR184
Classification: Structural Genomics, Unknown Function
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2013-03-28
Authors: Kuzin, A., Smith, M.D., Richter, F., Lew, S., Seetharaman, R., Bryan, C., Lech, Z., Kiss, G., Moretti, R., Maglaqui, M., Xiao, R., Kohan, E., Smith, M., Everett, J.K., Nguyen, R., Pande, V., Hilvert, D., Kornhaber, G., Baker, D., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 4jxj: Crystal Structure of Ribosomal RNA small subunit methyltransferase A from Rickettsia bellii Determined by Iodide SAD Phasing
Classification: TRANSFERASE
Source organism: Rickettsia bellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4jxk: Crystal Structure of Oxidoreductase ROP_24000 (Target EFI-506400) from Rhodococcus opacus B4
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-28
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Al Obaidi, N., Stead, M., Love, J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4jxm: Crystal structure of RRP9 WD40 repeats
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2013-03-28
Authors: Wu, X., Tempel, W., Xu, C., El Bakkouri, M., He, H., Seitova, A., Li, Y., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 4jxn: CRYSTAL STRUCTURE OF POLYPRENYL SYNTHASE ISP_B (TARGET EFI-509198) FROM Roseobacter denitrificans
Classification: TRANSFERASE
Source organism: Roseobacter denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-03-28
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Al Obaidi, N., Stead, M., Love, J., Poulter, C.D., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4jxq: Crystal structure of a GNAT superfamily phosphinothricin acetyltransferase (Pat) from Sinorhizobium meliloti 1021
Classification: TRANSFERASE
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2013-03-28
Authors: Majorek, K.A., Cooper, D.R., Osinski, T., Ahmed, M., Stead, M., Hillerich, B., Seidel, R., Bonanno, J.B., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jxr: Crystal structure of a GNAT superfamily phosphinothricin acetyltransferase (Pat) from Sinorhizobium meliloti in complex with AcCoA
Classification: TRANSFERASE
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2013-03-28
Authors: Majorek, K.A., Cooper, D.R., Porebski, P.J., Konina, K., Ahmed, M., Stead, M., Hillerich, B., Seidel, R., Bonanno, J.B., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jxs: X-ray crystal structure of AmpC beta-lactamase from E. coli in complex with a non-covalent inhibitor 3-[(4-CARBOXYBENZYL)SULFAMOYL]THIOPHENE-2-CARBOXYLIC ACID (compound 4)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-28
Authors: Powers, R.A., Hendershot, J.M.
PDB entry 4jxt: CID of human RPRD1A in complex with a phosphorylated peptide from RPB1-CTD
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-28
Authors: Ni, Z., Xu, C., Tempel, W., El Bakkouri, M., Loppnau, P., Guo, X., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Min, J., Greenblatt, J.F., Structural Genomics Consortium (SGC)
PDB entry 4jxu: Structure of aminotransferase ilvE2 from Sinorhizobium meliloti complexed with PLP
Classification: TRANSFERASE
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-28
Authors: Cooper, D.R., Cymborowski, M.T., Majorek, K.A., Niedzialkowska, E., Porebski, P.J., Stead, M., Hammonds, J., Seidel, R., Ahmed, M., Bonanno, J.B., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jxv: X-ray crystal structure of AmpC beta-lactamase from E. coli in complex with a non-covalent inhibitor 3-{[2-(4-CARBOXYPHENYL)ETHYL]SULFAMOYL}THIOPHENE-2-CARBOXYLIC ACID (compound 5)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2013-03-28
Authors: Powers, R.A., Hendershot, J.M.
PDB entry 4jxw: X-ray crystal structure of AmpC beta-lactamase from E. coli in complex with a non-covalent inhibitor 3-{[3-(4-CARBOXYPHENYL)PROPYL]SULFAMOYL}THIOPHENE-2-CARBOXYLIC ACID (compound 6)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-03-28
Authors: Powers, R.A., Hendershot, J.M.
PDB entry 4jxx: Crystal structure of E coli E. coli glutaminyl-tRNA synthetase bound to tRNA(Gln)(CUG) and ATP from novel cryostabilization conditions
Classification: ligase/rna
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-03-28
Authors: Perona, J.J., Rodriguez-Hernandez, A.
PDB entry 4jxy: CRYSTAL STRUCTURE OF POLYPRENYL SYNTHASE PATL_3739 (TARGET EFI-509195) FROM Pseudoalteromonas atlantica
Classification: TRANSFERASE
Source organism: Pseudoalteromonas atlantica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-28
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Al Obaidi, N., Stead, M., Love, J., Poulter, C.D., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4jxz: Structure of E. coli glutaminyl-tRNA synthetase bound to ATP and a tRNA(Gln) acceptor containing a UUG anticodon
Classification: ligase/rna
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-28
Authors: Perona, J.J., Rodriguez-Hernandez, A.
PDB entry 4jy0: Crystal structure of hcv ns5b polymerase in complex with compound 3
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-28
Authors: Coulombe, R.
PDB entry 4jy1: CRYSTAL STRUCTURE OF HCV NS5B POLYMERASE IN COMPLEX WITH COMPOUND 5
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-03-28
Authors: Coulombe, R.
PDB entry 4jy2: Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, native and unliganded form
Classification: OXIDOREDUCTASE
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.935 Å
Deposited: 2013-03-28
Authors: Kobayashi, J., Yoshida, H., Kamitori, S., Hayashi, H., Mizutani, K., Takahashi, N., Mikami, B., Yagi, T.
PDB entry 4jy3: Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, 5-pyridoxic acid bound form
Classification: OXIDOREDUCTASE
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2013-03-29
Authors: Kobayashi, J., Yoshida, H., Kamitori, S., Hayashi, H., Mizutani, K., Takahashi, N., Mikami, B., Yagi, T.
PDB entry 4jy4: Crystal structure of human Fab PGT121, a broadly reactive and potent HIV-1 neutralizing antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-03-29
Authors: Julien, J.-P., Diwanji, D.C., Burton, D.R., Wilson, I.A.
PDB entry 4jy5: Crystal structure of human Fab PGT122, a broadly reactive and potent HIV-1 neutralizing antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-03-29
Authors: Julien, J.-P., Diwanji, D.C., Burton, D.R., Wilson, I.A.
PDB entry 4jy6: Crystal structure of human Fab PGT123, a broadly reactive and potent HIV-1 neutralizing antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-29
Authors: Julien, J.-P., Diwanji, D.C., Burton, D.R., Wilson, I.A.
PDB entry 4jy7: Crystal structure of Acinetobacter baumannii Peptidyl-tRNA Hydrolase
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-29
Authors: Yamini, S., Kaushik, S., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4jy8: X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.901 Å
Deposited: 2013-03-29
Authors: Nicolet, Y., Rohac, R., Martin, L., Fontecilla-Camps, J.C.
PDB entry 4jy9: X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-03-29
Authors: Nicolet, Y., Rohac, R., Martin, L., Fontecilla-Camps, J.C.
PDB entry 4jya: Crystal structures of pseudouridinilated stop codons with ASLs
Classification: RIBOSOME
Source organism: Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.098 Å
Deposited: 2013-03-29
Authors: Fernandez, I.S., Ng, C.L., Kelley, A.C., Guowei, W., Yu, Y.T., Ramakrishnan, V.
PDB entry 4jyb: MeaB, A Bacterial Homolog of MMAA, Bound to GMPPNP
Classification: HYDROLASE
Source organism: Methylobacterium extorquens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-03-29
Authors: Koutmos, M., Lofgren, M., Padovani, D., Banerjee, R.
PDB entry 4jyc: MeaB, A Bacterial Homolog of MMAA, in its Apo form
Classification: CHAPERONE
Source organism: Methylobacterium extorquens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-29
Authors: Koutmos, M., Lofgren, M., Padovani, D., Banerjee, R.
PDB entry 4jyd: X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2013-03-29
Authors: Nicolet, Y., Rohac, R., Martin, L., Fontecilla-Camps, J.C.
PDB entry 4jye: X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-03-29
Authors: Nicolet, Y., Rohac, R., Martin, L., Fontecilla-Camps, J.C.
PDB entry 4jyf: X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2013-03-29
Authors: Nicolet, Y., Rohac, R., Martin, L., Fontecilla-Camps, J.C.
PDB entry 4jyg: Crystal structure of RARbeta LBD in complex with agonist BMS411 [4-{[(5,5-dimethyl-8-phenyl-5,6-dihydronaphthalen-2-yl)carbonyl]amino}benzoic acid]
Classification: Transcription/Agonist
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-03-29
Authors: Nadendla, E.K., Teyssier, C., Germain, P., Delfosse, V., Bourguet, W.
PDB entry 4jyh: Crystal structure of RARbeta LBD in complex with selective agonist BMS948 [4-{[(8-phenylnaphthalen-2-yl)carbonyl]amino}benzoic acid]
Classification: Transcription/Agonist
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-03-29
Authors: Nadendla, E.K., Teyssier, C., Germain, P., Delfosse, V., Bourguet, W.
PDB entry 4jyi: Crystal structure of RARbeta LBD in complex with selective partial agonist BMS641 [3-chloro-4-[(E)-2-(5,5-dimethyl-8-phenyl-5,6-dihydronaphthalen-2-yl)ethenyl]benzoic acid]
Classification: Transcription/Agonist
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-29
Authors: Nadendla, E.K., Teyssier, C., Germain, P., Delfosse, V., Bourguet, W.
PDB entry 4jyj: Crystal Structure of putative enoyl-CoA hydratase/isomerase from Novosphingobium aromaticivorans DSM 12444
Classification: ISOMERASE
Source organism: Novosphingobium aromaticivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-29
Authors: Cooper, D.R., Porebski, P.J., Domagalski, M.J., Ahmed, M., Stead, M., Hillerich, B., Seidel, R., Zimmerman, M., Bonanno, J.B., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jyk: Structure of E. coli Transcriptional Regulator RutR with bound uracil
Classification: TRANSCRIPTION REGULATOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-03-29
Authors: Cooper, D.R., Knapik, A.A., Petkowski, J.J., Porebski, P.J., Osinski, T., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jyl: Crystal structure of enoyl-CoA hydratase from Thermoplasma volcanium GSS1
Classification: LYASE
Source organism: Thermoplasma volcanium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2013-03-29
Authors: Shabalin, I.G., Cooper, D.R., Majorek, K.A., Mikolajczak, K., Porebski, P.J., Stead, M., Hillerich, B.S., Ahmed, M., Bonanno, J., Seidel, R., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jym: crystal Structure of KAI2 in complex with 3-methyl-2H-furo[2,3-c]pyran-2-one
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-03-30
Authors: Guo, Y., Zheng, Z., Noel, J.P.
PDB entry 4jyo: Structural basis for angiopoietin-1 mediated signaling initiation
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-31
Authors: Yu, X., Seegar, T.C.M., Dalton, A.C., Tzvetkova-Robev, D., Goldgur, Y., Nikolov, D.B., Barton, W.A.
PDB entry 4jyp: crystal Structure of KAI2 Apo form
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-03-31
Authors: Guo, Y., Zheng, Z., Noel, J.P.
PDB entry 4jyq: DHP-CO crystal structure
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-31
Authors: Zhao, J., Srajer, V., Franzen, S.
PDB entry 4jys: Crystal structure of FKBP25 from Plasmodium Vivax
Classification: ISOMERASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-01
Authors: Sreekanth, R., Yoon, H.S.
PDB entry 4jyt: Crystal Structure of Matriptase in complex with Inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-01
Authors: Subramanya, H.S., Ravi, B.C., Ashok, K.N., Chakshusmathi, G., Ramesh, K.S.
PDB entry 4jyu: Structure of factor VIIA in complex with the inhibitor (2R)-2-[(1-AMINOISOQUINOLIN-6-YL)AMINO]-2-[3-ETHOXY-4-(PROPAN-2-YLOXY)PHENYL]-N-(PHENYLSULFONYL)ETHANAMIDE
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-01
Authors: Wei, A., Anumula, R.
PDB entry 4jyv: Structure of factor VIIA in complex with the inhibitor (2R)-2-[3-ETHOXY-4-(PROPAN-2-YLOXY)PHENYL]-2-(ISOQUINOLIN-6-YLAMINO)-N-[(3-SULFAMOYLPHENYL)SULFONYL]ETHANAMIDE
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2013-04-01
Authors: Wei, A., Anumula, R.
PDB entry 4jyw: X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with CTT1057
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2013-04-01
Authors: Barinka, C.
PDB entry 4jyx: Crystal structure of polyprenyl synthase PATL_3739 (TARGET EFI-509195) FROM PSEUDOALTEROMONAS ATLANTICA, COMPLEX WITH INORGANIC PHOSPHATE AND AN UNKNOWN LIGAND
Classification: TRANSFERASE
Source organism: Pseudoalteromonas atlantica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-04-01
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Al Obaidi, N., Stead, M., Love, J., Poulter, C.D., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4jyy: Crystal structure of the azide and iron substituted Clostrium difficile SOD2 complex
Classification: OXIDOREDUCTASE
Source organism: Clostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.101 Å
Deposited: 2013-04-01
Authors: Li, W., Ying, T.L., Wang, C.L., Zhao, Y., Wang, H.F., Tan, X.S.
PDB entry 4jyz: Crystal structure of E. coli glutaminyl-tRNA synthetase bound to ATP and native tRNA(Gln) containing the cmnm5s2U34 anticodon wobble base
Classification: ligase/rna
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-04-01
Authors: Perona, J.J., Rodriguez-Hernandez, A.
PDB entry 4jz0: X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with CTT1055
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2013-04-02
Authors: Barinka, C.
PDB entry 4jz1: Crystal Structure of Matriptase in complex with Inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-02
Authors: Subramanya, H.S., Ravi, B.C., Ashok, K.N., Chakshusmathi, G., Ramesh, K.S.
PDB entry 4jz2: Crystal structure of Co ion substituted SOD2 from Clostridium difficile
Classification: OXIDOREDUCTASE
Source organism: Clostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-04-02
Authors: Li, W., Ying, T.L., Wang, C.L., Zhao, Y., Wang, H.F., Tan, X.S.
PDB entry 4jz3: Crystal structure of the chicken c-Src-SH3 domain intertwined dimer
Classification: SIGNALING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.852 Å
Deposited: 2013-04-02
Authors: Camara-Artigas, A.
PDB entry 4jz4: Crystal structure of chicken c-Src-SH3 domain: monomeric form
Classification: SIGNALING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2013-04-02
Authors: Camara-Artigas, A.
PDB entry 4jz5: High-resolution structure of catalytic domain of endolysin ply40 from bacteriophage P40 of Listeria monocytogenes
Classification: HYDROLASE
Source organism: Listeria phage P40
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2013-04-02
Authors: Romero-Fernandez, P., Bartual, S.G., Carrasco-lopez, C., Hermoso, J.A.
PDB entry 4jz6: Crystal structure of a salicylaldehyde dehydrogenase from Pseudomonas putida G7 complexed with salicylaldehyde
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.417 Å
Deposited: 2013-04-02
Authors: Coitinho, J.B., Nagem, R.A.P.
PDB entry 4jz7: Carbamate kinase from Giardia lamblia bound to AMP-PNP
Classification: TRANSFERASE
Source organism: Giardia lamblia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-04-02
Authors: Lim, K., Herzberg, O.
PDB entry 4jz8: Carbamate kinase from Giardia lamblia bound to citric acid
Classification: TRANSFERASE
Source organism: Giardia lamblia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-02
Authors: Lim, K., Herzberg, O.
PDB entry 4jz9: Carbamate kinase from Giardia lamblia bound to citric acid
Classification: TRANSFERASE
Source organism: Giardia lamblia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-02
Authors: Lim, K., Herzberg, O.
PDB entry 4jza: Crystal structure of a Legionella phosphoinositide phosphatase: insights into lipid metabolism in pathogen host interaction
Classification: HYDROLASE
Source organism: Legionella longbeachae NSW150
Experimental method: X-RAY DIFFRACTION
Resolution: 2.584 Å
Deposited: 2013-04-02
Authors: Toulabi, L., Wu, X., Cheng, Y., Mao, Y.
PDB entry 4jzb: Crystal Structure of Leshmaniasis major Farnesyl diphosphate synthase in complex with 1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)-3-PHENYLPYRIDINIUM, IPP and Ca2+
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-02
Authors: Aripirala, S., Amzel, L.M., Gabelli, S.
PDB entry 4jzc: Angiopoietin-2 fibrinogen domain TAG mutant
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-02
Authors: Yu, X., Seegar, T.C.M., Dalton, A.C., Tzvetkova-Robev, D., Goldgur, Y., Nikolov, D.B., Barton, W.A.
PDB entry 4jzd: Structure of factor VIIA in complex with the inhibitor 2-{2-[(4-carbamimidoylphenyl)carbamoyl]-6-methoxypyridin-3-yl}-5-{[(2S)-1-hydroxy-3,3-dimethylbutan-2-yl]carbamoyl}benzoic acid
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-02
Authors: Jacobson, B.L., Anumula, R.
PDB entry 4jze: Structure of factor VIIA in complex with the inhibitor 2-{2-[(1-aminoisoquinolin-6-yl)carbamoyl]-6-methoxypyridin-3-yl}-5-{[(2S)-1-hydroxy-3,3-dimethylbutan-2-yl]carbamoyl}benzoic acid
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2013-04-02
Authors: Wei, A., Anumula, R.