LiteFold/PDB huggingface dataset:
PDB entry 8x1g: Human adenylate kinase 1 (hAK1) mutant-R97W
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-11-07
Authors: Yu, J.
PDB entry 8x1h: Crystal structure of N-terminal domain of Nucleocapsid protein of SARS-CoV-2
Classification: RNA BINDING PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-07
Authors: Kumari, S., Gupta, G.D.
PDB entry 8x1i: ParM present of genome of Desufitobacterium hafniense - Dh-cParM1
Classification: STRUCTURAL PROTEIN
Source organism: Desulfitobacterium hafniense Y51
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-11-07
Authors: Ali, S., Robinson, R.C., Narita, A.
PDB entry 8x1k: Structure of RvY_06210 at 2.55 angstrom resolution
Classification: HYDROLASE
Source organism: Ramazzottius varieornatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-11-08
Authors: Kato, S., Fukuda, Y., Inoue, T.
PDB entry 8x1l: Crystal structure of S96C/L132C mutant of FfIBP
Classification: ANTIFREEZE PROTEIN
Source organism: Flavobacterium frigoris PS1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-08
Authors: Nam, Y., Do, H.
PDB entry 8x1n: Cryo-EM structure of human alpha-fetoprotein
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2023-11-08
Authors: Liu, Z.M., Li, M.S., Wu, C., Liu, K.
PDB entry 8x1o: Crystal structure of M249C/N270C mutant of FfIBP
Classification: ANTIFREEZE PROTEIN
Source organism: Flavobacterium frigoris PS1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-11-08
Authors: Nam, Y., Do, H.
PDB entry 8x1p: Crystal structure of G160C/S176C mutant of FfIBP
Classification: ANTIFREEZE PROTEIN
Source organism: Flavobacterium frigoris PS1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-08
Authors: Nam, Y., Do, H.
PDB entry 8x1q: Cryo-EM structure of human DRA (SLC26A3) bound with bicarbonate
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2023-11-08
Authors: Yang, X., Zhang, Y.
PDB entry 8x1r: Cryo-EM structure of human DRA (SLC26A3) bound with chloride
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-11-08
Authors: Yang, X., Zhang, Y.
PDB entry 8x1s: Cryo-EM structure of human DRA (SLC26A3) bound with tenidap
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2023-11-08
Authors: Yang, X., Zhang, Y.
PDB entry 8x1t: Cryo-EM structure of human DRA (SLC26A3) bound with sulfate
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2023-11-08
Authors: Yang, X., Zhang, Y.
PDB entry 8x1u: Cryo-EM structure of human DRA (SLC26A3) bound with oxalate
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2023-11-08
Authors: Yang, X., Zhang, Y.
PDB entry 8x1v: NMR structure of a bimolecular parallel G-quadruplex formed by AAGGG repeats from pathogenic RFC1 gene
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2023-11-08
Authors: Wang, Y., Guo, P., Han, D.
PDB entry 8x1w: CYP725A4 apo structure
Classification: BIOSYNTHETIC PROTEIN
Source organism: Taxus cuspidata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-11-09
Authors: Chang, Z., Wang, Q.
PDB entry 8x1x: SARS-CoV-2 Papain like protease (PLpro) in complex with inhibitor Lithocholic acid
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-11-09
Authors: Choudhary, S., Verma, S., Kumar, P., Tomar, S.
PDB entry 8x1z: HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y:DNA:E-CFCP-TP ternary complex
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2023-11-09
Authors: Yasutake, Y., Hattori, S.I., Mitsuya, H.
PDB entry 8x20: HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:E-CFCP-TP ternary complex
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-11-09
Authors: Yasutake, Y., Hattori, S.I., Mitsuya, H.
PDB entry 8x21: HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:ETV-TP ternary complex
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2023-11-09
Authors: Yasutake, Y., Hattori, S.I., Mitsuya, H.
PDB entry 8x22: HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:dGTP ternary complex
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2023-11-09
Authors: Yasutake, Y., Hattori, S.I., Mitsuya, H.
PDB entry 8x23: The Crystal Structure of MAPK13 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-11-09
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Pan, W.
PDB entry 8x24: anti-CRISPR protein-AcrIF25
Classification: VIRAL PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.834 Å
Deposited: 2023-11-09
Authors: Wang, J.J.
PDB entry 8x26: Crystal structure of H5 hemagglutinin from human-infecting H5N8 influenza virus in complex with LSTa
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2023-11-09
Authors: Jin, X.Y., Song, H., Han, P., Qi, J.X.
PDB entry 8x27: Crystal structure of H5 hemagglutinin from human-infecting H5N8 influenza virus in complex with LSTc
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2023-11-09
Authors: Jin, X.Y., Han, P., Song, H., Qi, J.X.
PDB entry 8x28: Crystal structure of H5 hemagglutinin from human-infecting H5N8 influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2023-11-09
Authors: Jin, X.Y., Han, P., Song, H., Qi, J.X.
PDB entry 8x29: Crystal structure of H5 hemagglutinin from swan-infecting H5N8 influenza virus in complex with LSTa
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.613 Å
Deposited: 2023-11-09
Authors: Jin, X.Y., Han, P., Song, H., Qi, J.X.
PDB entry 8x2a: The Crystal Structure of BMX from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-11-09
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Pan, W.
PDB entry 8x2c: Crystal structure of H5 hemagglutinin from swan-infecting H5N8 influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2023-11-09
Authors: Jin, X.Y., Han, P., Song, H., Qi, J.X.
PDB entry 8x2d: Crystal structure of H5 hemagglutinin from swan-infecting H5N8 influenza virus complexed with avian receptor analog LSTc
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2023-11-09
Authors: Jin, X.Y., Han, P., Song, H., Qi, J.X.
PDB entry 8x2f: Cryo-EM structure of H5 hemagglutinin from human-infecting H5N8 influenza virus in complex with Sialyl-Lewis X
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2023-11-09
Authors: Jin, X.Y., Han, P., Song, H., Qi, J.X.
PDB entry 8x2h: Cryo-EM structure of the TcsL at pH 5.0 in its closed conformation
Classification: TOXIN
Source organism: Paeniclostridium sordellii (strain ATCC 9714 / DSM 2141 / JCM 3814 / LMG 15708 / NCIMB 10717 / 211)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-11-09
Authors: Zhan, X., Tao, L.
PDB entry 8x2i: Cryo-EM structure of the TcsL at pH 5.0 in its open conformation
Classification: TOXIN
Source organism: Paeniclostridium sordellii (strain ATCC 9714 / DSM 2141 / JCM 3814 / LMG 15708 / NCIMB 10717 / 211)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-11-09
Authors: Zhan, X., Tao, L.
PDB entry 8x2j: Cryo-EM structure of the photosynthetic alternative complex III with a quinone inhibitor HQNO from Chloroflexus aurantiacus
Classification: MEMBRANE PROTEIN
Source organism: Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-11-09
Authors: Xu, X.
PDB entry 8x2k: OEA bound GPR3-Gs complex structure
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2023-11-09
Authors: Geng, C., Yang, D., Jun, X.
PDB entry 8x2l: Structure of human phagocyte NADPH oxidase in the resting state in the presence of 2 mM NADPH
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-11-09
Authors: Chen, L., Liu, X.
PDB entry 8x2m: Cryo-EM structure of the IR/IGF-I complex, conformation 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2023-11-09
Authors: Xi, Z.
PDB entry 8x2n: Cryo-EM structure of human DRA (SLC26A3) at pH 6.5
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2023-11-09
Authors: Yang, X., Zhang, Y.
PDB entry 8x2o: RIPK2 in complex with K252
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2023-11-10
Authors: Yang, J.H., Yang, J.H.
PDB entry 8x2p: The Crystal Structure of LCK from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-11-10
Authors: Wang, F., Cheng, W., Lv, Z., Meng, Q., Lu, Y.
PDB entry 8x2q: The Crystal Structure of APC from Biortus.
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-10
Authors: Wang, F., Cheng, W., Lv, Z., Ju, C., Bao, C.
PDB entry 8x2r: The Crystal Structure of HSP 90-alpha from Biortus.
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-11-10
Authors: Wang, F., Cheng, W., Lv, Z., Meng, Q., Lu, Y.
PDB entry 8x2s: The Crystal Structure of BPGM from Biortus
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-11-10
Authors: Wang, F., Cheng, W., Yuan, Z., Qi, J., Li, J.
PDB entry 8x2t: The Crystal Structure of FES from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-11-10
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Pan, W.
PDB entry 8x2u: Radial spoke head-neck dimer
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2023-11-10
Authors: Meng, X., Cong, Y.
PDB entry 8x2v: Crystal structure of the ancestral GH19 chitinase, Anc4+LoopII (P12K/N13H mutant)
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2023-11-10
Authors: Kozome, D., Laurino, P.
PDB entry 8x2w: Crystal structure of the ancestral GH19 chitinase, Anc4+LoopII (P12K/N13H/S58T/N193G/Y194F/D197R)
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-11-10
Authors: Kozome, D., Laurino, P.
PDB entry 8x2x: The piccolo NuA4 bound to the H2A.Z nucleosome complex at pre-H4-acetylation state
Classification: GENE REGULATION
Source organism: Escherichia coli; Saccharomyces cerevisiae; Schistosoma japonicum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-11-10
Authors: Wang, L., Zhang, H., Zhu, H., Zhu, P.
PDB entry 8x2y: The class1 of piccolo NuA4 bound to the H2A.Z nucleosome complex at harboring state
Classification: GENE REGULATION
Source organism: Escherichia coli; Saccharomyces cerevisiae; Schistosoma japonicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-11-10
Authors: Wang, L., Zhang, H., Zhu, H., Zhu, P.
PDB entry 8x2z: The class2 of piccolo NuA4 bound to the H2A.Z nucleosome complex at harboring state
Classification: GENE REGULATION
Source organism: Escherichia coli; Saccharomyces cerevisiae; Schistosoma japonicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-11-10
Authors: Wang, L., Zhang, H., Zhu, H., Zhu, P.
PDB entry 8x30: Structure of piccolo NuA4 and H2A.Z nucleosome 2:1 complex
Classification: GENE REGULATION
Source organism: Escherichia coli; Saccharomyces cerevisiae; Schistosoma japonicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-11-10
Authors: Wang, L., Zhang, H., Zhu, H., Zhu, P.
PDB entry 8x31: The piccolo NuA4 bound to the H2A.Z nucleosome complex with Ac-CoA at resetting state
Classification: GENE REGULATION
Source organism: Escherichia coli; Saccharomyces cerevisiae; Schistosoma japonicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2023-11-10
Authors: Wang, L., Zhang, H., Zhu, H., Zhu, P.
PDB entry 8x32: The piccolo NuA4 bound to the H2A.Z nucleosome-H4KQ Complex with Ac-CoA at resetting state
Classification: GENE REGULATION
Source organism: Escherichia coli; Saccharomyces cerevisiae; Schistosoma japonicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-11-10
Authors: Wang, L., Zhang, H., Zhu, H., Zhu, P.
PDB entry 8x33: crystal structure of the CobH-like domain in cobalt regulator CoaR
Classification: METAL BINDING PROTEIN
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-11-10
Authors: Liu, X.
PDB entry 8x34: Human Kelch like-ECH Associated Protein 1 (Keap1)
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-11-11
Authors: Yilmaz, M., Gul, M., DeMirci, H.
PDB entry 8x35: Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form A)
Classification: TRANSFERASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-11-12
Authors: Imaizumi, R., Matsuura, H., Yanai, T., Takeshita, K., Misawa, S., Yamaguchi, H., Sakai, N., Miyagi-Inoue, Y., Suenaga-Hiromori, M., Kataoka, K., Nakayama, T., Yamamoto, M., Takahashi, S., Yamashita, S.
PDB entry 8x36: Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form B)
Classification: TRANSFERASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2023-11-12
Authors: Imaizumi, R., Matsuura, H., Yanai, T., Takeshita, K., Misawa, S., Yamaguchi, H., Sakai, N., Miyagi-Inoue, Y., Suenaga-Hiromori, M., Kataoka, K., Nakayama, T., Yamamoto, M., Takahashi, S., Yamashita, S.
PDB entry 8x37: Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP
Classification: TRANSFERASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-11-12
Authors: Imaizumi, R., Matsuura, H., Yanai, T., Takeshita, K., Misawa, S., Yamaguchi, H., Sakai, N., Miyagi-Inoue, Y., Suenaga-Hiromori, M., Kataoka, K., Nakayama, T., Yamamoto, M., Takahashi, S., Yamashita, S.
PDB entry 8x38: Crystal Structure of Decarboxylative Vanillate 1-Hydroxylase from Phanerochaete chrysosporium
Classification: OXIDOREDUCTASE
Source organism: Phanerochaete chrysosporium RP-78
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-12
Authors: Suzuki, H., Mori, R., Ishida, T., Igarashi, K., Shimizu, M.
PDB entry 8x39: Crystal structure of cellulosomal double-dockerin module of Clo1313_0689 from Clostridium thermocellum
Classification: PROTEIN BINDING
Source organism: Acetivibrio thermocellus DSM 1313
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-11-12
Authors: Chen, C., Dong, S., Feng, Y.
PDB entry 8x3a: Solution NMR structure of cellulosomal double-dockerin module of Clo1313_0689 from Clostridium thermocellum
Classification: PROTEIN BINDING
Source organism: Acetivibrio thermocellus DSM 1313
Experimental method: SOLUTION NMR
Deposited: 2023-11-12
Authors: Chen, C., Feng, Y.
PDB entry 8x3e: CYP725A4-Taxa-4,11-diene complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Taxus cuspidata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-11-13
Authors: Chang, Z., Wang, Q.
PDB entry 8x3g: Crystal structure of metformin hydrolase from Aminobacter
Classification: HYDROLASE
Source organism: Aminobacter sp. NyZ550
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2023-11-13
Authors: Li, T., Zhou, N.Y.
PDB entry 8x3h: Crystal structure of iron-bound recombinant ovotransferrin N-lobe at 0.93 angstrom resolution
Classification: METAL TRANSPORT
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2023-11-13
Authors: Toyoda, M., Mikami, B., Mizutani, K.
PDB entry 8x3k: Cryo-EM structure of human VMAT2 in complex with serotonin.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-11-13
Authors: Wei, F., Zhang, W., Zhang, Y.
PDB entry 8x3l: Cryo-EM structure of CB2-G protein complex
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-11-14
Authors: Shen, S.Y., Yang, Z.Q., Shao, Z.H.
PDB entry 8x3m: Crystal structure of p38alpha with an allosteric inhibitor 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-11-14
Authors: Hasegawa, S., Kinoshita, T.
PDB entry 8x3n: Thanatin VF16 in complex with LPS
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-11-14
Authors: Swaleeha, J., Bhattacharyya, S.
PDB entry 8x3o: Structure of Cyclic Rev
Classification: ANTIVIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: SOLUTION NMR
Deposited: 2023-11-14
Authors: Kim, D., Lim, Y., Barnwal, R.P.
PDB entry 8x3p: Structure of linear Rev
Classification: ANTIVIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: SOLUTION NMR
Deposited: 2023-11-14
Authors: Kim, D., Lim, Y., Barnwal, R.P.
PDB entry 8x3q: tll1591 with alpha-glucan 4sugar
Classification: TRANSFERASE
Source organism: Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2023-11-14
Authors: Su, J.Y.
PDB entry 8x3r: Crystal structure of human WDR5 in complex with WDR5
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-11-14
Authors: Liu, Y., Huang, X.
PDB entry 8x3s: Crystal structure of human WDR5 in complex with PTEN
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-11-14
Authors: Liu, Y., Huang, X., Shang, X.
PDB entry 8x3u: tll1591 with alpha_glucan 3sugar
Classification: TRANSFERASE
Source organism: Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2023-11-14
Authors: Su, J.Y.
PDB entry 8x3v: Crystal structure of 2C from encephalomyocarditis virus bound with ATP
Classification: HYDROLASE
Source organism: Encephalomyocarditis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-11-14
Authors: Zhang, H., Zhao, H., Dong, Y.H.
PDB entry 8x3w: Crystal structure of DIMT1 from the thermophilic archaeon, Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-11-14
Authors: Sayan, S., Mandal, S.K., Dutta, A., Kanaujia, S.P.
PDB entry 8x3x: ThDP-dependent HKA synthase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Brevibacillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-11-14
Authors: Yu, J.H., Liu, T.
PDB entry 8x3y: ThDP-dependent HKA synthase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Brevibacillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-11-14
Authors: Yu, J.H., Liu, T.
PDB entry 8x3z: ThDP-dependent HKA synthase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Chryseomicrobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-11-14
Authors: Yu, J.H., Liu, T.
PDB entry 8x40: Free VF16 in aqueous solution
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-11-14
Authors: Swaleeha, J., Bhattacharyya, S.
PDB entry 8x41: Crystal structure of DIMT1 in complex with 5'-methylthioadenosine and adenosine from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-11-14
Authors: Saha, S., Mandal, S.K., Dutta, A., Kanaujia, S.P.
PDB entry 8x42: Complex structure of AtHPPD with YH20195
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.097 Å
Deposited: 2023-11-14
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8x43: human KCNQ2-CaM-Ebio1-S1 complex in the presence of PIP2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-11-15
Authors: Ma, D., Guo, J.
PDB entry 8x44: Crystal structure of DIMT1 in complex with 5'-methylthioadenosine from Pyrococcus horikoshii (FormI)
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-11-15
Authors: Saha, S., Kanaujia, S.P.
PDB entry 8x45: Crystal structure of DIMT1 in complex with 5'-methylthioadenosine from Pyrococcus horikoshii (FormII)
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-11-15
Authors: Saha, S., Kanaujia, S.P.
PDB entry 8x46: Crystal structure of DIMT1 in complex with adenosylornithine (SFG) from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-11-15
Authors: Saha, S., Kanaujia, S.P.
PDB entry 8x47: Crystal structure of DIMT1 in complex with S-adenosyl-L-homocysteine (SAH) from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-11-15
Authors: Saha, S., Dutta, A., Kanaujia, S.P.
PDB entry 8x48: Cryo-EM structure of Ryanodine receptor 1 (EGTA)
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-11-15
Authors: Chen, Q., Hu, H.
PDB entry 8x49: Cryo-EM structure of Ryanodine receptor 1 (100 nM Ca2+)
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-11-15
Authors: Chen, Q., Hu, H.
PDB entry 8x4a: Cryo-EM structure of Ryanodine receptor 1 (TM helix S0,100 nM Ca2+, closed state)
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-11-15
Authors: Chen, Q., Hu, H.
PDB entry 8x4b: Cryo-EM structure of Ryanodine receptor 1 (TM helix S0,100 nM Ca2+, open state)
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-11-15
Authors: Chen, Q., Hu, H.
PDB entry 8x4c: Cryo-EM structure of Ryanodine receptor 1 (20 uM Ca2+, 2 mM ATP)
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-11-15
Authors: Chen, Q., Hu, H.
PDB entry 8x4d: Cryo-EM structure of Ryanodine receptor 1 (TM helix S0,20 uM Ca2+, 2 mM ATP)
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-11-15
Authors: Chen, Q., Hu, H.
PDB entry 8x4e: Cryo-EM structure of Ryanodine receptor 1 (TM helix S0, 5 mM Ca2+)
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-11-15
Authors: Chen, Q., Hu, H.
PDB entry 8x4f: Solution NMR structure of a DNA hairpin formed by pure CTG repeats
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2023-11-15
Authors: Guo, P., Wan, L., Han, D.
PDB entry 8x4g: Crystal structure of the D117A mutant of DIMT1 from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-11-15
Authors: Saha, S., Kanaujia, S.P.
PDB entry 8x4h: SARS-CoV-2 JN.1 Spike
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2023-11-15
Authors: Yue, C., Liu, P.
PDB entry 8x4i: Crystal structure of the D117A mutant of DIMT1 in complex with 5'-methylthioadenosine from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-11-15
Authors: Saha, S., Dutta, A., Kanaujia, S.P.
PDB entry 8x4j: Crystal structure of the glycosyltransferase domain of Legionella SetA (unbound)
Classification: TRANSFERASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2023-11-15
Authors: Im, H.N., Lee, Y., Jang, D.M., Hahn, H., Kim, H.S.
PDB entry 8x4k: Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPDGlc
Classification: TRANSFERASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-11-15
Authors: Im, H.N., Lee, Y., Jang, D.M., Hahn, H., Kim, H.S.
PDB entry 8x4l: Crystal structure of the N132A mutant of DIMT1 from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-11-15
Authors: Saha, S., Kanaujia, S.P.
PDB entry 8x4m: Crystal structure of the glycosyltransferase domain of Legionella SetA in complex with UPD
Classification: TRANSFERASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2023-11-15
Authors: Im, H.N., Lee, Y., Jang, D.M., Hahn, H., Kim, H.S.
PDB entry 8x4n: Crystal structure of the PI3P-binding domain of Legionella SetA in complex with inositol 1,3-bisphosphate
Classification: TRANSFERASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2023-11-15
Authors: Im, H.N., Lee, Y., Jang, D.M., Hahn, H., Kim, H.S.
PDB entry 8x4o: Crystal structure of the Y135A mutant of DIMT1 in complex with 5'-methylthioadenosine from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-11-15
Authors: Saha, S., Kanaujia, S.P.
PDB entry 8x4p: Crystal structure of the Y135A mutant of DIMT1 in complex with adenosylornithine (SFG) from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-11-15
Authors: Saha, S., Kanaujia, S.P.
PDB entry 8x4q: Apo structure of L-tryptophan specific decarboxylase PsiD
Classification: OXIDOREDUCTASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-11-15
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8x4r: Pyruvate kinase M2 (PKM2) mutant in complex with phenylalanine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2023-11-15
Authors: Wang, W.C., Su, T.H.
PDB entry 8x4s: The L-tryptophan specific decarboxylase PsiD covalent bonding with tryptamine
Classification: OXIDOREDUCTASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-11-15
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8x4z: BA.2.86 Spike Trimer with ins483V mutation (3 RBD down)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2023-11-16
Authors: Yue, C., Liu, P.
PDB entry 8x50: BA.2.86 Spike Trimer with ins483V mutation (1 RBD up)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.82 Å
Deposited: 2023-11-16
Authors: Yue, C., Liu, P.
PDB entry 8x51: Structure of DNA-bound GajA dimer (focused refinement)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Bacillus cereus VD045; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-11-16
Authors: Li, J., Wang, Z., Wang, L.
PDB entry 8x52: Cryo-EM structure of human gamma-secretase in complex with Abeta49
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-11-16
Authors: Guo, X., Yan, C., Lei, J., Zhou, R., Shi, Y.
PDB entry 8x53: Cryo-EM structure of human gamma-secretase in complex with Abeta46
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-11-16
Authors: Guo, X., Yan, C., Lei, J., Zhou, R., Shi, Y.
PDB entry 8x54: Cryo-EM structure of human gamma-secretase in complex with APP-C99
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-11-16
Authors: Guo, X., Yan, C., Lei, J., Zhou, R., Shi, Y.
PDB entry 8x55: BA.2.86 Spike Trimer with T356K mutation (3 RBD down)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2023-11-16
Authors: Yue, C., Liu, P.
PDB entry 8x56: BA.2.86 Spike Trimer with T356K mutation (1 RBD up)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2023-11-16
Authors: Yue, C., Liu, P.
PDB entry 8x5b: Cryo-EM structures of human XPR1 in closed states
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2023-11-16
Authors: Jiang, D.H., Yan, R.
PDB entry 8x5c: Complex structure of AtHPPD with YH20540
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.788 Å
Deposited: 2023-11-16
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8x5d: The cryo-EM structure of the Mycobacterium tuberculosis CRISPR-Csm complex
Classification: RNA BINDING PROTEIN
Source organism: Mycobacterium canettii; Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-11-17
Authors: Liu, M.X., Li, Z.K.
PDB entry 8x5e: Cryo-EM structure of human XPR1 in open state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2023-11-17
Authors: Jiang, D.H., Yan, R.
PDB entry 8x5f: human XPR1 in complex with InsP6
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2023-11-17
Authors: Jiang, D.H., Yan, R.
PDB entry 8x5h: The cryo-EM structure of TMEM106B amyloid fibril in PD patient.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2023-11-17
Authors: Zhao, Q.Y., Fan, Y., Zhao, W.B., Li, D., Liu, C.
PDB entry 8x5i: Structure of ATP/Mg2+ bound Gabija GajA
Classification: DNA BINDING PROTEIN
Source organism: Bacillus cereus VD045
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2023-11-17
Authors: Li, J., Wang, Z., Wang, L.
PDB entry 8x5j: The Crystal Structure of PARP5A from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-11-17
Authors: Wang, F., Cheng, W., Yuan, Z., Qi, J., Wu, B.
PDB entry 8x5k: The Crystal Structure of SYK from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-11-17
Authors: Wang, F., Cheng, W., Yuan, Z., Qi, J., Shen, Z.
PDB entry 8x5l: The Crystal Structure of PRKACA from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-11-17
Authors: Wang, F., Cheng, W., Lv, Z., Lin, D., Pan, W.
PDB entry 8x5m: The Crystal Structure of JNK1 from Biortus.
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-17
Authors: Wang, F., Cheng, W., Yuan, Z., Qi, J., Li, J.
PDB entry 8x5n: Structure of ATP/Mg2+ bound Gabija GajA-GajB 4:4 complex
Classification: DNA BINDING PROTEIN
Source organism: Bacillus cereus VD045
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-11-17
Authors: Li, J., Wang, Z., Wang, L.
PDB entry 8x5o: Crystal structure of the post-fusion core of MjHKUr-CoV spike protein.
Classification: VIRAL PROTEIN
Source organism: Coronavirus HKU15
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2023-11-17
Authors: Zhu, Y., Yang, X., Sun, F.
PDB entry 8x5p: Crystal structure of MjHKUr-CoV spike HR1 in complex with EK1 peptide
Classification: VIRAL PROTEIN
Source organism: Coronavirus HKU23
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2023-11-17
Authors: Zhu, Y., Yang, X., Sun, F.
PDB entry 8x5q: SARS-CoV-2 BA.2.75 Spike with K356T mutation (3 RBD down)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2023-11-17
Authors: Yue, C., Liu, P.
PDB entry 8x5r: SARS-CoV-2 BA.2.75 Spike with K356T mutation (1 RBD up)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2023-11-17
Authors: Yue, C., Liu, P.
PDB entry 8x5s: Crystal structure of shikimate kinase of Mycobacterium tuberculosis complex with shikimate-3-phosphate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.726 Å
Deposited: 2023-11-18
Authors: Yadav, A.K., Madhuri, M., Saini, C., Inampudi, K.K., Ethayathulla, A.S., Kumar, M.
PDB entry 8x5t: Crystal structure of Thermus thermophilus peptidyl-tRNA hydrolase in complex with adenosine 5'-monophosphate
Classification: TRANSLATION
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-11-19
Authors: Uehara, Y., Matsumoto, A., Nakazawa, T., Fukuta, A., Ando, K., Oka, N., Uchiumi, T., Ito, K.
PDB entry 8x5u: Crystal structure of Thermus thermophilus peptidyl-tRNA hydrolase C-terminal 16 amino acid deletion mutant
Classification: TRANSLATION
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-11-19
Authors: Uehara, Y., Matsumoto, A., Nakazawa, T., Fukuta, A., Ando, K., Oka, N., Uchiumi, T., Ito, K.
PDB entry 8x5v: BlCas9-sgRNA-target DNA complex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Brevibacillus laterosporus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-19
Authors: Nakane, T., Nakagawa, R., Yamashita, K., Nishimasu, H., Nureki, O.
PDB entry 8x5x: CryoEM structure of the histamine H1 receptor in apo-form
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-11-20
Authors: Wang, D.D., Guo, Q., Tao, Y.Y.
PDB entry 8x5y: CryoEM structure of the histamine H1 receptor-BRIL/Anti BRIL Fab complex with astemizole
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-11-20
Authors: Wang, D.D., Guo, Q., Tao, Y.Y.
PDB entry 8x5z: The Crystal Structure of PAK1 kinase domain from Biortus.
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-11-20
Authors: Wang, F., Cheng, W., Lv, Z., Ju, C., Ni, C.
PDB entry 8x61: Cryo-EM structure of ATP-bound FtsE(E163Q)X
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-11-20
Authors: Zhang, Z.Y., Chen, Y.T.
PDB entry 8x62: crystal structure of human Mcl-1 kinase domain in complex with RM1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.80339 Å
Deposited: 2023-11-20
Authors: Zhang, Z.M., Wang, L.
PDB entry 8x63: CryoEM structure of the histamine H1 receptor-BRIL/Anti BRIL Fab complex with mepyramine
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-11-20
Authors: Wang, D.D., Guo, Q.
PDB entry 8x64: CryoEM structure of the histamine H1 receptor-BRIL/Anti BRIL Fab complex with desloratadine
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-11-20
Authors: Wang, D.D., Guo, Q.
PDB entry 8x65: Crystal structure of X11P(P71T) xylanase from a metagenome derived gene from sugarcane bagasse collection site
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-11-20
Authors: Chitnumsub, P., Jaruwat, A., Boonyapakron, K., Prabmark, K.
PDB entry 8x66: Crystal structure of triple mutant X11P(P71T+N13F+Q34L) xylanase from a metagenome derived gene from sugarcane bagasse collection site
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-11-20
Authors: Chitnumsub, P., Jaruwat, A., Boonyapakron, K., Prabmark, K.
PDB entry 8x67: solution structure of Pru p 7
Classification: STRUCTURAL PROTEIN
Source organism: Prunus persica
Experimental method: SOLUTION NMR
Deposited: 2023-11-20
Authors: Zheng, J., Aizawa, T., Kumeta, H.
PDB entry 8x68: Complex structure of AtHPPD with YH21002
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.895 Å
Deposited: 2023-11-20
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8x69: Complex structure of AtHPPD with YH23010
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.796 Å
Deposited: 2023-11-20
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8x6a: Complex structure of AtHPPD with Y18992
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2023-11-20
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8x6b: Crystal structure of immune receptor PVRIG in complex with ligand Nectin-2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-21
Authors: Hu, S.T., Han, P., Wang, H., Qi, J.X.
PDB entry 8x6c: Complex structure of AtHPPD with YH23024
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.796 Å
Deposited: 2023-11-21
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8x6d: Crystal structure of the C-terminal TBF1
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-21
Authors: Gao, Y., Niu, L.W.
PDB entry 8x6e: crystal structure of the N-terminal TBF1
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 2.00002 Å
Deposited: 2023-11-21
Authors: Gao, Y., Niu, L.W.
PDB entry 8x6f: Cryo-EM structure of Staphylococcus aureus sigA-dependent RNAP-promoter open complex
Classification: TRANSCRIPTION/DNA
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-11-21
Authors: Yuan, L., Xu, L., Liu, Q., Feng, Y.
PDB entry 8x6g: Cryo-EM structure of Staphylococcus aureus sigB-dependent RNAP-promoter open complex
Classification: TRANSCRIPTION
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-11-21
Authors: Yuan, L., Xu, L., Liu, Q., Feng, Y.
PDB entry 8x6k: The X-ray structure of N-terminal catalytic domain of Thermoplasma acidophilum tRNA methyltransferase Trm56 (Ta0931).
Classification: TRANSFERASE
Source organism: Thermoplasma acidophilum DSM 1728
Experimental method: X-RAY DIFFRACTION
Resolution: 1.802 Å
Deposited: 2023-11-21
Authors: Fukumoto, S., Hasegawa, T., Ototake, M., Moriguchi, S., Namba, M., Yamagami, R., Kawamura, T., Hirata, A., Hori, H.
PDB entry 8x6l: PRMT5:MEP50 WITH SCR-6920 AND SAM
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2023-11-21
Authors: Zhou, F., Zhou, F.
PDB entry 8x6m: Crystal Structure of Glycerol Dehydrogenase in the Presence of NAD+ and Glycerol
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-21
Authors: Park, T., Kang, J.Y., Jin, M., Yang, J., Kim, H., Noh, C., Eom, S.H.
PDB entry 8x6p: Isomerase Protein
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2023-11-21
Authors: Guven, O., Demirci, H.
PDB entry 8x6q: Crystal structure of OsHSL1 L204F/F298L/I335F complexed with 2-acetyl-cyclohexane-2,4-dione
Classification: OXIDOREDUCTASE
Source organism: Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2023-11-21
Authors: Lin, H.-Y., Dong, J., Yang, G.-F.
PDB entry 8x6r: KRasG12C in complex with inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-11-21
Authors: Amano, Y., Tateishi, Y.
PDB entry 8x6u: Crystal structure of EfCDA in complex with dFdU
Classification: HYDROLASE
Source organism: Enterococcus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-11-22
Authors: Jiang, L., Huang, Y.
PDB entry 8x6v: Crystal structure of GlacPETase
Classification: HYDROLASE
Source organism: Pseudomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.797 Å
Deposited: 2023-11-22
Authors: Qi, X., Zhou, N.Y.
PDB entry 8x6w: Crystal structure of EfCDA
Classification: HYDROLASE
Source organism: Enterococcus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-11-22
Authors: Jiang, L., Huang, Y.
PDB entry 8x6x: Structure of the multidrug efflux pump EfpA from M. tuberculosis complexed with lipids
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-11-22
Authors: Gao, F., Zhang, X., Li, D., Ma, X.
PDB entry 8x6y: Crystal structure of EfCDA
Classification: HYDROLASE
Source organism: Enterococcus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-11-22
Authors: Jiang, L., Huang, Y.
PDB entry 8x6z: 1-naphthylamine GS from Pseudomonas sp. JS3066
Classification: LIGASE
Source organism: Pseudomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2023-11-22
Authors: Zhou, N.Y., Zhang, S.T.
PDB entry 8x70: The Crystal Structure of IFI16 from Biortus.
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-11-22
Authors: Wang, F., Cheng, W., Lv, Z., Meng, Q., Wang, J.
PDB entry 8x71: Crystal structure of Peroxiredoxin I in complex with compound 19-064
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2023-11-22
Authors: Zhang, H., Luo, C.
PDB entry 8x72: The Crystal Structure of PLK1 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-11-22
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Wu, B.
PDB entry 8x73: Crystal structure of Peroxiredoxin I in complex with compound 19-069
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-11-22
Authors: Zhang, H., Luo, C.
PDB entry 8x74: Crystal structure of ZmHSL1A complexed with mesotrione
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.791 Å
Deposited: 2023-11-22
Authors: Lin, H.-Y., Dong, J., Yang, G.-F.
PDB entry 8x77: Enterovirus proteinase with host factor
Classification: CELL INVASION
Source organism: Enterovirus A71; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.52 Å
Deposited: 2023-11-23
Authors: Gao, X., Cui, S.
PDB entry 8x78: Crystal Structure of N-Acyl Homoserine Lactone Lactonase from Pseudomonas poae
Classification: HYDROLASE
Source organism: Pseudomonas poae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2023-11-23
Authors: Li, X.H., Su, D.
PDB entry 8x79: MRE-269 bound Prostacyclin Receptor G protein complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2023-11-23
Authors: Wang, J.J., Jin, S., Zhang, H., Xu, Y., Hu, W., Jiang, Y., Chen, C., Wang, D.W., Xu, H.E., Wu, C.
PDB entry 8x7a: Treprostinil bound Prostacyclin Receptor G protein complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2023-11-23
Authors: Wang, J.J., Jin, S., Zhang, H., Xu, Y., Hu, W., Jiang, Y., Chen, C., Wang, D.W., Xu, H.E., Wu, C.
PDB entry 8x7b: ThT-bound E46K alpha-synuclein fibrils
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-11-23
Authors: Liu, K.E., Tao, Y.Q., Li, D., Liu, C.