LiteFold/PDB huggingface dataset:
PDB entry 9kut: Structure of JR14a bound to human C3aR in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-12-04
Authors: Banerjee, R., Ganguly, M., Yadav, M.K., Mishra, S., Dalal, A., Shukla, A.K.
PDB entry 9kuu: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation D130G
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-12-04
Authors: Liu, C.
PDB entry 9kuv: Mechanistic insights into the versatile stoichiometry and biased signaling of the apelin receptor-arrestin complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-12-04
Authors: Yue, Y., Wu, L.J., Xu, F.
PDB entry 9kuw: Cryo-EM structure of dimeric APJR and two Beta-arrestins complex with small molecules
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-12-04
Authors: Yue, Y., Wu, L.J., Xu, F.
PDB entry 9kux: Cryo-EM structure of dimeric APJR and one Beta-arrestin complex with small molecules
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2024-12-04
Authors: Yue, Y., Wu, L.J., Xu, F.
PDB entry 9kuy: Cryo-EM structure of human G6PT in apo state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-12-04
Authors: Jiang, D.H., Xia, Z.Y.
PDB entry 9kuz: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation D134H
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-12-04
Authors: Liu, C.
PDB entry 9kv0: Cryo-EM structure of human G6PT in complex with chlorogenic acid
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-12-04
Authors: Jiang, D.H., Xia, Z.Y.
PDB entry 9kv1: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation E141G
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-12-04
Authors: Liu, C.
PDB entry 9kv6: Structure of mouse TLQP21 bound to mouse C3aR in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-12-04
Authors: Banerjee, R., Yadav, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kv7: Cryo-EM structure of mouse RIPK1-DD filament
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-12-04
Authors: Zhang, H.
PDB entry 9kv8: Structure of human TLQP21 bound to mouse C3aR in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-12-04
Authors: Banerjee, R., Yadav, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kv9: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation E141G-Ca
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-12-04
Authors: Liu, C.
PDB entry 9kva: ECR CK PROTEIN
Classification: OXIDOREDUCTASE
Source organism: Mesorhizobium metallidurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-12-04
Authors: Kulakman, C., DeMirci, H., Wakatsuki, S., Mathews, I.
PDB entry 9kvb: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2024-12-04
Authors: Liu, C.
PDB entry 9kvc: Crystal structure of tryptophanyl-tRNA synthetase from Staphylococcus aureus
Classification: LIGASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2024-12-05
Authors: Ren, Y., Qiao, H., Fang, P.
PDB entry 9kvd: Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with triple-nAb 3G5, 4H5 and 4C11
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macaca mulatta; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-12-05
Authors: Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.
PDB entry 9kve: Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with triple-nAb 4H1, 4A5 and 4C1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macaca mulatta; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-12-05
Authors: Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.
PDB entry 9kvf: Cryo-EM structure of SARS-CoV-2 EG.1 spike protein in complex with triple-nAb 4A5, 4C1 and 2E10
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macaca mulatta; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-05
Authors: Sun, H., Jiang, Y., Wang, S., Zheng, Z., Li, S., Zheng, Q.
PDB entry 9kvg: A Cryo_EM structure of 5_HT1A complex with 5-Meo-DMT
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2024-12-05
Authors: Yuan, Q., Li, S.
PDB entry 9kvh: A Cryo_EM structure of 5_HT1A complex with TMT
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-12-05
Authors: Yuan, Q., Li, S.
PDB entry 9kvi: A Cryo_EM structure of 5_HT1A complex with DMT
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2024-12-05
Authors: Yuan, Q., Li, S.
PDB entry 9kvj: Cryo-EM structure of SARS-CoV-2 BA.5 spike protein in complex with nAb 1C4 (local refinement)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.82 Å
Deposited: 2024-12-05
Authors: Sun, H., Jiang, Y., Li, S., Zheng, Q.
PDB entry 9kvk: Cryo-EM structure of SARS-CoV-2 spike protein in complex with three-nAb 8H12, 3E2 and 1C4
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-12-05
Authors: Sun, H., Jiang, Y., Li, S., Zheng, Q.
PDB entry 9kvl: Neutron and X-ray joint refined structure of a copper-containing nitrite reductase (C135A mutant) in complex with nitrite
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans NG80-2
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2024-12-05
Authors: Fukuda, Y., Lintuluoto, M., Hirano, Y., Kusaka, K., Inoue, T., Tamada, T.
PDB entry 9kvm: Neutron and X-ray joint refined structure of a copper-containing nitrite reductase (C135A mutant) in complex with formate
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2024-12-05
Authors: Fukuda, Y., Lintuluoto, M., Hirano, Y., Kusaka, K., Inoue, T., Tamada, T.
PDB entry 9kvn: Structure of UKD domain in the bifunctional enzyme CelAly
Classification: SUGAR BINDING PROTEIN
Source organism: Aquimarina sp. 2-A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.702 Å
Deposited: 2024-12-05
Authors: Xu, F., Zhang, Y.Z., Sun, X.H.
PDB entry 9kvo: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation D132E
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2024-12-05
Authors: Liu, C.
PDB entry 9kvp: Structure of SB290157 bound to human C3aR in complex with Go (Full map)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-12-05
Authors: Banerjee, R., Sano, F.K., Yadav, M.K., Sawada, K., Ganguly, M., Mishra, S., Dalal, A., Nureki, O., Shukla, A.K.
PDB entry 9kvq: Cryo-EM structure of SARS-CoV-2 BA.1 spike protein in complex with three-nAb 8H12, 3E2 and 1C4
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2024-12-05
Authors: Sun, H., Jiang, Y., Li, S., Zheng, Q.
PDB entry 9kvr: A peptide derived from the extracellular domain of the human TRPV3 channel
Classification: MEMBRANE PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-12-05
Authors: Li, H.W., Zhang, W.B., Deng, Z., Wang, C.X.
PDB entry 9kvt: Cryo-EM structure of SARS-CoV-2 BA.2 spike protein in complex with triple-nAb 8H12, 3E2 and 1C4 (local refinement)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-12-05
Authors: Sun, H., Jiang, Y., Li, S., Zheng, Q.
PDB entry 9kvu: Structure of B1 domain in the bifunctional enzyme CelAly
Classification: SUGAR BINDING PROTEIN
Source organism: Aquimarina sp. 2-A2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-12-05
Authors: Xu, F., Zhang, Y.Z., Sun, X.H.
PDB entry 9kvv: Cryo-EM structure of human G6PT in complex with G6P
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-12-05
Authors: Jiang, D.H., Xia, Z.Y.
PDB entry 9kvw: Crystal Structures of Keap1-compound complexes
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2024-12-05
Authors: Zhuang, C.L., Yu, R.L.
PDB entry 9kvx: Cryo-EM structure of SLC30A10 in Mn2+-bound state, determined in inward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-12-05
Authors: Yang, H., Zhang, J.K., Shen, X.
PDB entry 9kvy: Cryo-EM structure of SLC30A10, determined in asymmetric conformations-one subunit in an inward-facing Mn2+-bound and the other in an outward-facing Mn2+-unbound conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2024-12-05
Authors: Yang, H., Zhang, J.K., Shen, X.
PDB entry 9kvz: Cryo-EM structure of SLC30A10 in the absence of Mn2+, determined in inward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-12-05
Authors: Yang, H., Zhang, J.K., Shen, X.
PDB entry 9kw0: Crystal structure of S. aureus tryptophanyl-tRNA synthetase complexed with tryptophan
Classification: LIGASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2024-12-05
Authors: Ren, Y., Qiao, H., Fang, P.
PDB entry 9kw1: Crystal structure of proteinase K from Engyodontium album
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-12-05
Authors: Sugahara, M., Maki-Yonekura, S., Yonekura, K.
PDB entry 9kw2: Crystal structure of CYP105A1 R84A and ketoconazole complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-05
Authors: Hirano, Y., Yoneda, S., Yasuda, K., Takimoto-Kamimura, M., Sakaki, T., Tamada, T.
PDB entry 9kw3: Crystal structure of CYP105A1 R84A and lanoconazole complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-05
Authors: Hirano, Y., Yoneda, S., Yasuda, K., Takimoto-Kamimura, M., Sakaki, T., Tamada, T.
PDB entry 9kw4: Crystal structure of CYP105A1 R84A and miconazole complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-05
Authors: Hirano, Y., Yoneda, S., Yasuda, K., Takimoto-Kamimura, M., Sakaki, T., Tamada, T.
PDB entry 9kw5: Crystal structure of CYP105A1 R84A, diclofenac and lanoconazole complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-12-05
Authors: Hirano, Y., Yoneda, S., Yasuda, K., Takimoto-Kamimura, M., Sakaki, T., Tamada, T.
PDB entry 9kw6: Polyether epoxide hydrolase MonBI-MonBII complex
Classification: HYDROLASE
Source organism: Streptomyces virginiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2024-12-05
Authors: Yao, M., Oikawa, A., Minami, A., Ozaki, T., Maenaka, K., Kumeta, H., Oikawa, H., Ose, T.
PDB entry 9kw7: Polyether epoxide hydrolase MonBI K7A mutant
Classification: HYDROLASE
Source organism: Streptomyces virginiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2024-12-05
Authors: Yao, M., Arai, A., Minami, A., Ozaki, T., Kumeta, H., Oikawa, H., Ose, T.
PDB entry 9kw8: Polyether epoxide hydrolase MonBI-MonBII complex with product analogue
Classification: HYDROLASE
Source organism: Streptomyces virginiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2024-12-05
Authors: Yao, M., Dosen, T., Minami, A., Ozaki, T., Maenaka, K., Kumeta, H., Oikawa, H., Ose, T.
PDB entry 9kw9: Crystal structure of proline dipeptidase from Pyrococcus furiosus complexed with Co
Classification: HYDROLASE
Source organism: Pyrococcus furiosus DSM 3638
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-12-05
Authors: Kinkar, O.U., Chandravanshi, K., Kumar, A., Makde, R.D.
PDB entry 9kwa: Crystal structure of proline dipeptidase from Pyrococcus furiosus complexed with Mn
Classification: HYDROLASE
Source organism: Pyrococcus furiosus DSM 3638
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-12-05
Authors: Kinkar, O.U., Chandravanshi, K., Kumar, A., Makde, R.D.
PDB entry 9kwb: Cas12a-PCPS-dark
Classification: DNA BINDING PROTEIN/RNA
Source organism: Lachnospiraceae bacterium ND2006; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-12-05
Authors: Zhang, M.F.
PDB entry 9kwc: Cas12a-PCPS-light
Classification: header DNA BINDING PROTEIN/RNA
Source organism: Lachnospiraceae bacterium ND2006; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-05
Authors: Zhang, M.F.
PDB entry 9kwd: Crystal structure of E.coli LysU complexing with LysSA and ATP
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.49 Å
Deposited: 2024-12-05
Authors: Xia, M., Hei, Z., Fang, P.
PDB entry 9kwe: Cryo-EM structure of the ICT01-BTN3A1/BTN3A2 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-12-05
Authors: Xin, W.Z., Huang, B.D., Zhou, Q.
PDB entry 9kwf: Cryo-EM structure of Leptospirillum ferriphilum helicase Dda
Classification: DNA BINDING PROTEIN
Source organism: Leptospirillum ferriphilum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2024-12-05
Authors: Liu, R.H., Liu, J.D., Zhang, K., He, S.J., Feng, Q.S., Dai, J., Guo, X.R., Fu, Y., Li, Y.
PDB entry 9kwg: Structure of mouse C5a bound mouse C5aR1 in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-12-05
Authors: Banerjee, R., Yadav, M.K., Yadav, R., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kwh: Crystal structure of S. aureus tryptophanyl-tRNA synthetase complexed with chuangxinmycin
Classification: LIGASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2024-12-05
Authors: Ren, Y., Qiao, H., Wang, S., Liu, W., Fang, P.
PDB entry 9kwi: Cryo-EM structure of MsRv1273c/72c(E553Q) mutant from Mycobacterium smegmatis in the ATP-bound Occ state
Classification: TRANSPORT PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2024-12-05
Authors: Lan, Y., Yu, J., Li, J.
PDB entry 9kwl: hCES1A contently binding with compound F-3 at the catalytic pocket.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-12-06
Authors: Gai, C., Zhao, Q.
PDB entry 9kwm: hCES1A contently binding with compound F-4 at the catalytic pocket.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-12-06
Authors: Gai, C., Zhao, Q.
PDB entry 9kws: D98N mutant of a copper-containing nitrite reductase from Geobacillus thermodenitrificans
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2024-12-06
Authors: Fukuda, Y., Lintuluoto, M., Hirano, Y., Kusaka, K., Inoue, T.
PDB entry 9kwt: Structure of a copper-containing nitrite reductase (D98N/G136A mutant) from Geobacillus thermodenitrificans
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2024-12-06
Authors: Fukuda, Y., Lintuluoto, M., Hirano, Y., Kusaka, K., Inoue, T., Tamada, T.
PDB entry 9kwu: D98N/C135A mutant of a copper-containing nitrite reductase in complex with nitrite
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2024-12-06
Authors: Fukuda, Y., Lintuluoto, M., Hirano, Y., Kusaka, K., Inoue, T., Tamada, T.
PDB entry 9kwv: Structure of a D98N/C135A/G136A mutant copper-containing nitrite reductase in complex with nitrite
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2024-12-06
Authors: Fukuda, Y., Lintuluoto, M., Hirano, Y., Kusaka, K., Inoue, T., Tamada, T.
PDB entry 9kww: Crystal structure of S. aureus tryptophanyl-tRNA synthetase complexed with 3-demethylchuangxinmycin
Classification: LIGASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2024-12-06
Authors: Ren, Y., Qiao, H., Wang, S., Liu, W., Fang, P.
PDB entry 9kwx: Structure of mouse C5a-desArg bound mouse C5aR1 in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2024-12-06
Authors: Banerjee, R., Yadav, M.K., Yadav, R., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kwy: Cryo-EM structure of SARS-CoV-2 RBD in complex with ACE2 and mAb 1C4
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-12-06
Authors: Sun, H., Jiang, Y., Li, S., Zheng, Q.
PDB entry 9kwz: Cryo-EM structure of the ICT01-BTN2A1/BTN3A1/BTN3A2 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-12-06
Authors: Xin, W.Z., Huang, B.D., Zhou, Q.
PDB entry 9kx0: Crystal structure of CAMP3 factor of Cutibacterium acnes.
Classification: TOXIN
Source organism: Cutibacterium acnes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2024-12-06
Authors: Liu, C., Jin, T.
PDB entry 9kx1: Crystal structure of the PIN1 and fragment 17 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kx6: Structure of human C5a-desArg bound mouse C5aR1 in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-12-06
Authors: Banerjee, R., Yadav, M.K., Yadav, R., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kx7: Crystal structure of the PIN1 and fragment 34 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kx8: Mistletoe Lectin I from Viscum album complexed with epimer form of lactose
Classification: PLANT PROTEIN
Source organism: Viscum album
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-12-06
Authors: Saeed, A., Betzel, C., Brognaro, H., Rajaiah Prabhu, P., Alves Franca, B., Khaliq, B., Mehmood, S., Akrem, A.
PDB entry 9kx9: Crystal structure of the PIN1 and fragment 35 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxb: Crystal structure of S. aureus tryptophanyl-tRNA synthetase complexed with 3-methylchuangxinmycin
Classification: LIGASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2024-12-06
Authors: Ren, Y., Qiao, H., Wang, S., Liu, W., Fang, P.
PDB entry 9kxc: Crystal structure of the PIN1 and fragment 36 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxd: Crystal structure of the PIN1 and fragment 37 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxe: Crystal structure of the PIN1 and fragment 38 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxf: Crystal structure of the PIN1 and fragment 39 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxg: Crystal structure of the PIN1 and fragment 41 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxh: Crystal structure of the PIN1 and fragment 42 complex
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxi: Crystal structure of the PIN1 and fragment 31 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxj: Crystal structure of the PIN1 and fragment 53 complex
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxk: Crystal structure of the PIN1 and fragment 54 complex
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxl: Crystal structure of the PIN1 and fragment 56 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxm: Crystal structure of the PIN1 and fragment 57 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxn: Crystal structure of the PIN1 and fragment 58 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-12-06
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxo: Crystal structure of the PIN1 and fragment 21 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-12-07
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxp: Crystal structure of the PIN1 and fragment 33 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-12-07
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxq: Crystal structure of the PIN1 and fragment 55 complex.
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2024-12-07
Authors: Xiao, Q.J., Wu, T.T., Shu, H.L., Qin, W.M.
PDB entry 9kxr: Crystal structure of E. coli tryptophanyl-tRNA synthetase complexed with chuangxinmycin and tryptophanyl-5'-AMP
Classification: LIGASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2024-12-07
Authors: Ren, Y., Wang, S., Liu, W., Fang, P.
PDB entry 9kxs: Structure of EP67 bound mouse C5aR1 in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-12-07
Authors: Banerjee, R., Yadav, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kxt: Structure of human B0AT1-ACE2 complex with compound1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-12-07
Authors: Imazu, T., Miyaguchi, I., Hiraizumi, M.
PDB entry 9kxu: Structure of human B0AT1-ACE2 complex with compound 2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2024-12-07
Authors: Hiraizumi, M., Miyaguchi, I.
PDB entry 9kxv: Structure of human B0AT1-ACE2 complex with compound3
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2024-12-07
Authors: Imazu, T., Miyaguchi, I., Hiraizumi, M.
PDB entry 9kxw: Structure of human B0AT1-ACE2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2024-12-07
Authors: Imazu, T., Miyaguchi, I., Hiraizumi, M.
PDB entry 9kxx: Inward-open Structure of human B0AT1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2024-12-07
Authors: Imazu, T., Miyaguchi, I., Hiraizumi, M.
PDB entry 9kxy: Structure of human B0AT1-ACE2 complex with compound1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-12-07
Authors: Imazu, T., Miyaguchi, I.
PDB entry 9kxz: Structure of human B0AT1-ACE2 complex with compound1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-12-07
Authors: Imazu, T., Miyaguchi, I., Hiraizumi, M.
PDB entry 9ky0: Structure of human B0AT1-ACE2 complex with compound3
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-12-07
Authors: Imazu, T., Miyaguchi, I., Hiraizumi, M.
PDB entry 9ky1: Structure of human B0AT1-ACE2 complex with compound1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-12-07
Authors: Imazu, T., Miyaguchi, I., Hiraizumi, M.
PDB entry 9ky2: Structure of beta-arrestin2 in complex with mouse C5aR1pp
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-12-07
Authors: Banerjee, R., Yadav, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9ky3: Crystal structure of E. coli tryptophanyl-tRNA synthetase complexed with 3-demethylchuangxinmycin and tryptophanyl-5'-AMP
Classification: LIGASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-12-07
Authors: Ren, Y., Wang, S., Liu, W., Fang, P.
PDB entry 9ky4: Cryo-EM structure of the mono-DdCBE bound TS substrate complex.
Classification: DNA BINDING PROTEIN/DNA
Source organism: Burkholderia cenocepacia H111; Xanthomonas; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-08
Authors: Jiangchao, X., Jia, C., Bei, Y.
PDB entry 9ky5: Structure of y+LAT2 bound with Arg
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-12-08
Authors: Yan, R.H., Dai, L., Zhang, T.
PDB entry 9ky7: Eleven polymer Msp1 from S.cerevisiae (with a catalytic dead mutaion) in complex with an unknown peptide substrate
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-12-08
Authors: Simin, W., Chengdong, H., Xuan, C.
PDB entry 9ky9: Crystal structure of E. coli tryptophanyl-tRNA synthetase complexed with 3-methylchuangxinmycin and tryptophanyl-5'-AMP
Classification: LIGASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-12-08
Authors: Ren, Y., Wang, S., Liu, W., Fang, P.
PDB entry 9kya: Crystal Structure of human STING
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-12-08
Authors: Ouyang, Z., Wen, Y.
PDB entry 9kyb: PltBd1/PltBd2 heteropentameric holotoxin from S. diarizonae
Classification: TOXIN
Source organism: Salmonella enterica subsp. diarizonae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2024-12-08
Authors: Chen, Z., Wang, D.D., Gao, X.
PDB entry 9kyc: PltBd1/PltBd2 heteropentameric holotoxin from E. coli
Classification: TOXIN
Source organism: Salmonella enterica subsp. diarizonae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-12-08
Authors: Chen, Z., Wang, D.D., Gao, X.
PDB entry 9kyd: PltBd1 homopentameric holotoxin from E. coli
Classification: TOXIN
Source organism: Salmonella enterica subsp. diarizonae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-12-08
Authors: Chen, Z., Wang, D.D., Gao, X.
PDB entry 9kye: PltBd2 homopentameric holotoxin from E. coli
Classification: TOXIN
Source organism: Salmonella enterica subsp. diarizonae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-12-08
Authors: Chen, Z., Wang, D.D., Gao, X.
PDB entry 9kyf: Crystal structure of E.coli ac4C amidohydrolase YqfB
Classification: HYDROLASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-12-09
Authors: Guo, W.T., Wu, B.X., Meng, C.Y., Wen, Y.
PDB entry 9kyg: Crystal structure of E.coli ac4C amidohydrolase YqfB in complex with cytidine
Classification: HYDROLASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-12-09
Authors: Guo, W.T., Meng, C.Y., Wen, Y., Wu, B.X.
PDB entry 9kyh: Crystal structure of E.coli ac4C amidohydrolase YqfB in complex with ac4C
Classification: HYDROLASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-12-09
Authors: Guo, W.T., Meng, C.Y., Wen, Y., Wu, B.X.
PDB entry 9kyi: Crystal structure of mouse Endothelial-overexpressed lipopolysaccharide-associated factor 1 (EOLA1)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-12-09
Authors: Guo, W.T., Meng, C.Y., Wen, Y., Wu, B.X.
PDB entry 9kyj: Crystal structure of mouse Endothelial-overexpressed lipopolysaccharide-associated factor 1 (EOLA1), Selenomethionine derivative
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-12-09
Authors: Guo, W.T., Meng, C.Y., Wen, Y., Wu, B.X.
PDB entry 9kyk: Crystal structure of human TRIP4
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2024-12-09
Authors: Guo, W.T., Meng, C.Y., Wen, Y., Wu, B.X.
PDB entry 9kyl: Crystal structure of human TRIP4 in complex with 11bp dsDNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-12-09
Authors: Guo, W.T., Meng, C.Y., Wen, Y., Wu, B.X.
PDB entry 9kym: Folate ECF transporter affected by PFOS
Classification: HYDROLASE/TRANSPORT PROTEIN
Source organism: Levilactobacillus brevis ATCC 367
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2024-12-09
Authors: Gao, Y., Wang, Z.
PDB entry 9kyn: artificial dinuclear Cu-bound metalloprotein 3 (D3:Cu)
Classification: ISOMERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-12-09
Authors: Jeong, W.J., Song, W.J.
PDB entry 9kyo: GES bound mTAUT
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-12-09
Authors: She, J., Wang, M.X., He, J.
PDB entry 9kyp: GH57 family amylopullulanase from Aquifex aeolicus wild type complex with beta-cyclodextrin
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-12-09
Authors: Zhu, Z.M., Wang, W.W., Yu, F., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S.
PDB entry 9kyq: GH57 family amylopullulanase from Aquifex aeolicus wild type co-crystallize with gama-cyclodextrin
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-12-09
Authors: Zhu, Z.M., Wang, W.W., Yu, F., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S.
PDB entry 9kyr: GH57 family amylopullulanase from Aquifex aeolicus D352N mutant complex with gama-cyclodextrin
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-12-09
Authors: Zhu, Z.M., Wang, W.W., Yu, F., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S.
PDB entry 9kys: the Ca2+/CaM-CASK-ARD complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-12-09
Authors: Li, W., Wang, Y., Feng, W.
PDB entry 9kyt: Crystal structure of TapT-SAM complex from Escherichia coli
Classification: TRANSFERASE
Source organism: Escherichia coli (strain B / BL21-DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-12-09
Authors: Wang, W., Sun, A.
PDB entry 9kyu: Structure of beta-arrestin1 in complex with mouse C5aR1pp
Classification: SIGNALING PROTEIN
Source organism: Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2024-12-09
Authors: Banerjee, R., Yadav, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kyv: The scaffold dimer of phage P22
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2024-12-09
Authors: Liu, H.R., Xiao, H.
PDB entry 9kyw: The scaffold C-loop of phage P22
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2024-12-09
Authors: Liu, H.R., Xiao, H.
PDB entry 9kyx: The scaffold tetramer of phage P22
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.9 Å
Deposited: 2024-12-09
Authors: Liu, H.R., Xiao, H.
PDB entry 9kyy: The scaffold trimer of phage P22
Classification: VIRAL PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.9 Å
Deposited: 2024-12-09
Authors: Liu, H.R., Xiao, H.
PDB entry 9kyz: A35 of MPXV in complex with mAb975
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-09
Authors: Yan, R.H., Yang, H.N.
PDB entry 9kz1: Crystal structure of PlySb from a chimeolysin ClyR
Classification: LIGASE
Source organism: Streptococcus phage phiLP081102
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2024-12-09
Authors: Hu, F.
PDB entry 9kz2: Structure of EP67 bound human C3aR in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2024-12-09
Authors: Banerjee, R., Yadav, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kz3: PEDV 3CLpro mutant (C144A) in complex with nsp8|9 peptite substrate
Classification: VIRAL PROTEIN
Source organism: Porcine epidemic diarrhea virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-12-09
Authors: Zhang, Y., Zhang, D., Zhang, Z.T., Shi, Y.J., Peng, G.Q.
PDB entry 9kz4: Dihydrofolate reductase binding to NADPH and trimethoprim-tetramethylrhodamine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.708 Å
Deposited: 2024-12-09
Authors: Zhang, K.C., Chen, Z.X.
PDB entry 9kz5: Crystal structure of TapT-MTA complex from Escherichia coli
Classification: TRANSFERASE
Source organism: Escherichia coli (strain B / BL21-DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-12-10
Authors: Wang, W., Sun, A.
PDB entry 9kz6: The cryo-EM structure of porcine serum MGAM
Classification: HYDROLASE
Source organism: Sus scrofa domesticus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-12-10
Authors: Tagami, T., Kawasaki, M., Adachi, N.
PDB entry 9kz7: The cryo-EM structure of porcine serum MGAM bound with Acarviosyl-maltotriose.
Classification: HYDROLASE
Source organism: Sus scrofa domesticus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2024-12-10
Authors: Tagami, T., Kawasaki, M., Adachi, N.
PDB entry 9kz8: Structure of EP67 bound mouse C3aR in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-10
Authors: Banerjee, R., Yadav, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kz9: Cryo-EM structure of PSI-ACPI from Rhodomonas sp. NIES-2332 at 2.08 angstroms resolution
Classification: PHOTOSYNTHESIS
Source organism: Rhodomonas sp. NIES-2332
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.08 Å
Deposited: 2024-12-10
Authors: Zhang, W.Y., Akita, F., Shen, J.R.
PDB entry 9kza: Crystal structure of TapT-Sinefungin complex from Escherichia coli
Classification: TRANSFERASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-12-10
Authors: Wang, W., Sun, A.
PDB entry 9kzb: Cryo-EM structure of amyloid peptide-silk block protein fibril, Type 1
Classification: PROTEIN FIBRIL
Source organism: Latrodectus hesperus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2024-12-10
Authors: Zhang, Y.L., Dai, B.
PDB entry 9kzc: Cryo-EM structure of the LGI1 LRR-LGI1 EPTP-ADAM22 ECD complex
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-12-10
Authors: Yamaguchi, T., Okatsu, K., Kubota, M., Mitsumori, A., Yamagata, A., Fukai, S.
PDB entry 9kzd: The local refined map of SARS-CoV-2 EG.5.1 Variant Spike protein complexed with antibody XGi-171
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-12-10
Authors: Qiu, Y.N., Sun, L.
PDB entry 9kze: The local refined map of SARS-CoV-2 EG.5.1 Variant Spike protein complexed with antibody XGi-183
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-12-10
Authors: Qiu, Y.N., Sun, L.
PDB entry 9kzf: PEDV 3CLpro mutant (C144A) in complex with nsp7/8 peptite substrate
Classification: VIRAL PROTEIN
Source organism: Porcine epidemic diarrhea virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-12-10
Authors: Zhang, Y., Zhang, D., Shi, Y.J., Peng, G.Q.
PDB entry 9kzg: Cryo-EM structure of the LH1 complex from Roseiflexus castenholzii
Classification: STRUCTURAL PROTEIN
Source organism: Roseiflexus castenholzii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.28 Å
Deposited: 2024-12-10
Authors: Wang, L., Yu, L.-J.
PDB entry 9kzh: Cryo-EM structure of the RC complex from Rhodospirillum rubrum
Classification: STRUCTURAL PROTEIN
Source organism: Rhodospirillum rubrum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2024-12-10
Authors: Wang, L., Yu, L.-J.
PDB entry 9kzj: Cryo-EM structure of bacteriophage T1 capsid
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-12-10
Authors: Chen, Y., Liu, H.R.
PDB entry 9kzk: Structure of mouse C3a bound mouse C3aR in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2024-12-10
Authors: Banerjee, R., Yadav, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9kzl: Crystal structure of the functional unit (HtH1-h) of hemocyanin from Haliotis discus hannai,Containing a met site
Classification: METAL BINDING PROTEIN
Source organism: Haliotis discus hannai
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-12-10
Authors: Zhao, G.H., Yang, H.C.
PDB entry 9kzm: Crystal structure of C36S mutant Glutathione peroxidase of Staphylococcus aureus.
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-12-11
Authors: Maji, S., Shukla, M., Yadav, V.K., Jena, A.K., Bhattacharyya, S.
PDB entry 9kzn: Crystal structure of Tom1 in complex with Tollip
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-12-11
Authors: Wang, Y.L., Gong, X.Y.
PDB entry 9kzo: Cryo-EM structure of amyloid peptide-silk block protein fibril, Type 3
Classification: PROTEIN FIBRIL
Source organism: Latrodectus hesperus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2024-12-11
Authors: Zhang, Y.L., Dai, B.
PDB entry 9kzp: Z-form DNA-RNA hybrid in dynamic simulation
Classification: DNA/RNA
Experimental method: SOLUTION NMR
Deposited: 2024-12-11
Authors: Wang, S.Y., Xu, Y.
PDB entry 9kzs: PEDV 3CLpro mutant (C144A) in complex with nsp10/11 peptite substrate
Classification: VIRAL PROTEIN
Source organism: Porcine epidemic diarrhea virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-12-11
Authors: Zhang, Y., Zhang, D., Shi, Y.J., Peng, G.Q.
PDB entry 9kzt: Cryo-EM structure of the 3:3 LGI1-ADAM22 complex
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2024-12-11
Authors: Yamaguchi, T., Okatsu, K., Kubota, M., Mistumori, A., Yamagata, A., Fukai, S.
PDB entry 9kzu: Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3
Classification: RIBOSOME
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-11
Authors: Iwasaki, W., Kashiwagi, K., Sakamoto, A., Nishimoto, M., Takahashi, M., Machida, K., Imataka, H., Matsumoto, A., Shichino, Y., Iwasaki, S., Imami, K., Ito, T.
PDB entry 9kzw: structure of hZnT1 in apo state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-11
Authors: Xu, B., Wang, Y.
PDB entry 9kzx: Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (rotated state) in complexed with eIF3
Classification: RIBOSOME
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-11
Authors: Iwasaki, W., Kashiwagi, K., Sakamoto, A., Nishimoto, M., Takahashi, M., Machida, K., Imataka, H., Matsumoto, A., Shichino, Y., Iwasaki, S., Imami, K., Ito, T.
PDB entry 9kzz: Structure of SARS-CoV-2 EG.5.1 Variant Spike protein complexed with antibody XGi-171
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-12-11
Authors: Qiu, Y.N., Sun, L.
PDB entry 9l00: structure of hZnT1-CDDO-ME complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2024-12-11
Authors: Xu, B., Wang, Y.
PDB entry 9l01: Cryo-EM structure of bacteriophage T1 portal-adaptor
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-12-11
Authors: Chen, Y., Liu, H.R.
PDB entry 9l04: Crystal structure of human ALK2 kinase domain with R206H mutation in complex with RK783
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-12-11
Authors: Sakai, N., Mishima-Tsumagari, C., Shirouzu, M.
PDB entry 9l05: The local refined map of SARS-CoV-2 EG.5.1 Variant Spike protein complexed with antibody XGi-198
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2024-12-11
Authors: Qiu, Y.N., Sun, L.
PDB entry 9l07: The local refined map of SARS-CoV-2 EG.5.1 Variant Spike protein complexed with antibody XGi-203
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2024-12-11
Authors: Qiu, Y.N., Sun, L.