LiteFold/PDB huggingface dataset:
PDB entry 7u75: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 0.5 mM Mn2+ for 1800s then with 10 mM Mn2+ for 90s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u76: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 0.5 mM Mn2+ for 1800s then with 10 mM Mn2+ for 300s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u77: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 1.0 mM Mg2+ for 40s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u78: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 1.0 mM Mg2+ for 80s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u79: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 1.0 mM Mg2+ for 140s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7a: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 1.0 mM Mg2+ for 200s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7b: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 1.0 mM Mg2+ for 250s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7c: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 1.0 mM Mg2+ for 300s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7d: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 10.0 mM Mn2+ for 30s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7e: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 10.0 mM Mn2+ for 60s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7f: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 10.0 mM Mn2+ for 90s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7g: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 10.0 mM Mn2+ for 120s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7h: Cysteate acyl-ACP transferase from Alistipes finegoldii
Classification: TRANSFERASE
Source organism: Alistipes finegoldii (strain DSM 17242 / JCM 16770 / CCUG 46020 / CIP 107999 / KCTC 15236 / AHN 2437)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-03-07
Authors: Radka, C.D., Miller, D.J., Frank, M.W., Rock, C.O.
PDB entry 7u7i: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 10.0 mM Mn2+ for 180s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7j: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 10.0 mM Mn2+ for 300s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7k: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 10.0 mM Mn2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7l: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 1.0 mM Mg2+ for 300s with flipped-out product
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7m: Cryo-EM structure of the pancreatic ATP-sensitive potassium channel in the presence of carbamazepine and ATP with Kir6.2-CTD in the up conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2022-03-07
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7u7n: IL-27 quaternary receptor signaling complex
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2022-03-07
Authors: Caveney, N.A., Glassman, C.R., Jude, K.M., Tsutsumi, N., Garcia, K.C.
PDB entry 7u7o: Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional T-A rich sequence.
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2022-03-07
Authors: Ward, A.R., Snow, C.D.
PDB entry 7u7r: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex:no Me2+ soaking
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7s: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 0.025 mM Mg2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7t: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 0.05 mM Mg2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7u: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 0.1 mM Mg2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7v: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 0.4 mM Mg2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7w: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 1.0 mM Mg2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7x: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 2.0 mM Mg2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7y: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 0.06 mM Mn2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u7z: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 0.12 mM Mn2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u80: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 0.25 mM Mn2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u81: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 0.5 mM Mn2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u82: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 1.0 mM Mn2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u83: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 3.0 mM Mn2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u84: Human DNA polymerase eta-DNA-dGMPNPP ternary mismatch complex in 6.0 mM Mn2+ for 600s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u87: Product of 13mer primer with activated G monomer diastereomer 1
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2022-03-08
Authors: Fang, Z., Szostak, J.W.
PDB entry 7u88: Product of 13mer primer with activated G monomer diastereomer 2
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-03-08
Authors: Fang, Z., Szostak, J.W.
PDB entry 7u89: Product of 14mer primer with activated G monomer diastereomer 1
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-03-08
Authors: Fang, Z., Szostak, J.W.
PDB entry 7u8a: Product of 14mer primer with activated G monomer diastereomer 2
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-08
Authors: Fang, Z., Szostak, J.W.
PDB entry 7u8b: Product of 14mer primer with activated asymmetric GA dimer diastereomer 1
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-03-08
Authors: Fang, Z., Szostak, J.W.
PDB entry 7u8c: Crystal structure of Mesothelin C-terminal peptide-MORAb 15B6 FAB complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2022-03-08
Authors: Zhan, J., Esser, L., Xia, D.
PDB entry 7u8d: FKBP12 mutant V55G bound to Rapa*-3Z
Classification: ISOMERASE/ISOMERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2022-03-08
Authors: Wassarman, D.R., Shokat, K.M.
PDB entry 7u8e: Crystal structure of antibody Ab246 in complex with SARS-CoV-2 receptor binding domain
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-03-08
Authors: Sankhala, R.S., Joyce, M.G.
PDB entry 7u8f: Ternary complex structure of Cereblon-DDB1 bound to IKZF2(ZF2) and the molecular glue DKY709
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2022-03-08
Authors: Ma, X., Ornelas, E., Clifton, M.C.
PDB entry 7u8g: Cryo-EM structure of the core human NADPH oxidase NOX2
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-03-08
Authors: Noreng, S., Ota, N., Sun, Y., Masureel, M., Payandeh, J., Yi, T., Koerber, J.T.
PDB entry 7u8h: Discovery of a KRAS G12V Inhibitor in vivo Tool Compound starting from an HSQC-NMR based Fragment Hit
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.702 Å
Deposited: 2022-03-08
Authors: Phan, J., Fesik, S.W.
PDB entry 7u8j: Crystal structure of chimeric hemagglutinin cH4/3 in complex with broad protective antibody 31.a.83
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.9 Å
Deposited: 2022-03-08
Authors: Zhu, X., Wilson, I.A.
PDB entry 7u8k: Magic Angle Spinning NMR Structure of Human Cofilin-2 Assembled on Actin Filaments
Classification: CONTRACTILE PROTEIN, CELL CYCLE
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: SOLID-STATE NMR
Deposited: 2022-03-08
Authors: Kraus, J., Russell, R., Kudryashova, E., Xu, C., Katyal, N., Kudryashov, D., Perilla, J.R., Polenova, T.
PDB entry 7u8l: Crystal structure of chimeric hemagglutinin cH15/3 in complex with broad protective antibody 31.a.83
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.56 Å
Deposited: 2022-03-08
Authors: Zhu, X., Wilson, I.A.
PDB entry 7u8m: Crystal structure of chimeric hemagglutinin cH15/3 in complex with broad protective antibodies 31.a.83 and FluA-20
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 5.39 Å
Deposited: 2022-03-08
Authors: Zhu, X., Wilson, I.A.
PDB entry 7u8o: Structure of porcine V-ATPase with mEAK7 and SidK, Rotary state 2
Classification: MEMBRANE PROTEIN
Source organism: Legionella pneumophila; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-03-09
Authors: Tan, Y.Z., Keon, K.A.
PDB entry 7u8p: Structure of porcine kidney V-ATPase with SidK, Rotary State 1
Classification: MEMBRANE PROTEIN
Source organism: Legionella pneumophila; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-03-09
Authors: Tan, Y.Z., Keon, K.A.
PDB entry 7u8q: Structure of porcine kidney V-ATPase with SidK, Rotary State 2
Classification: MEMBRANE PROTEIN
Source organism: Legionella pneumophila; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-03-09
Authors: Tan, Y.Z., Keon, K.A.
PDB entry 7u8r: Structure of porcine kidney V-ATPase with SidK, Rotary State 3
Classification: MEMBRANE PROTEIN
Source organism: Legionella pneumophila; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-03-09
Authors: Tan, Y.Z., Keon, K.A.
PDB entry 7u8s: Crystal Structure of KPC-2 with compound 2
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-03-09
Authors: Akhtar, A., Chen, Y.
PDB entry 7u8t: Vps13 adaptor binding domain in complex with Mcp1 PxP motif peptide
Classification: LIPID TRANSPORT
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-03-09
Authors: Adlakha, J., Reinisch, K.M.
PDB entry 7u8u: hTRAP1 with inhibitors
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.065 Å
Deposited: 2022-03-09
Authors: Deng, J., Matts, R., Peng, S.
PDB entry 7u8v: hTRAP1 with inhibitors
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.448 Å
Deposited: 2022-03-09
Authors: Deng, J., Matts, R., Peng, S.
PDB entry 7u8w: hTRAP1 with inhibitors
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.706 Å
Deposited: 2022-03-09
Authors: Deng, J., Matts, R., Peng, S.
PDB entry 7u8x: hTRAP1 with inhibitors
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-03-09
Authors: Deng, J., Matts, R., Peng, S.
PDB entry 7u8y: TREX1 Structural Studies Capture Small Molecule Inhibition and Implicate Novel DNA Dynamics
Classification: HYDROLASE/INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-03-09
Authors: Hemphill, W.O., Harvey, S.E., Simpson, S.R., Smalley, T.L., Salsbury, F.R., Perrino, F.W., Hollis, T.
PDB entry 7u8z: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 (CD2) complexed with fluorinated peptoid inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-03-09
Authors: Watson, P.R., Cragin, A.D., Christianson, D.W.
PDB entry 7u91: Crystal structure of queuine salvage enzyme DUF2419, in complex with queuosine-5'-monophosphate
Classification: HYDROLASE
Source organism: Sphaerobacter thermophilus DSM 20745
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-03-09
Authors: Hung, S.-H., Swairjo, M.A.
PDB entry 7u92: SARS-CoV-2 Main Protease (Mpro) in Complex with ML1006a
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-09
Authors: Westberg, M., Fernandez, D., Lin, M.Z.
PDB entry 7u94: SAAV pH 7.4 capsid structure
Classification: VIRUS LIKE PARTICLE
Source organism: Snake adeno-associated virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-03-10
Authors: Mietzsch, M., McKenna, R.
PDB entry 7u95: SAAV pH 6.0 capsid structure
Classification: VIRUS LIKE PARTICLE
Source organism: Snake adeno-associated virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2022-03-10
Authors: Mietzsch, M., McKenna, R.
PDB entry 7u96: SAAV pH 5.5 capsid structure
Classification: VIRUS LIKE PARTICLE
Source organism: Snake adeno-associated virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.14 Å
Deposited: 2022-03-10
Authors: Mietzsch, M., McKenna, R.
PDB entry 7u97: SAAV pH 4.0 capsid structure
Classification: VIRUS LIKE PARTICLE
Source organism: Snake adeno-associated virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2022-03-10
Authors: Mietzsch, M., McKenna, R.
PDB entry 7u98: EGFR(T790M/V948R) in complex with a macrocyclic inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2022-03-10
Authors: Beyett, T.S., Eck, M.J.
PDB entry 7u99: EGFR kinase in complex with a macrocyclic inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-10
Authors: Beyett, T.S., Eck, M.J.
PDB entry 7u9a: EGFR in complex with a macrocyclic inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-03-10
Authors: Beyett, T.S., Eck, M.J.
PDB entry 7u9b: Crystal structure of indoline 7 with KPC-2
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-03-10
Authors: Akhtar, A., Chen, Y.
PDB entry 7u9c: Crystal Structure of the wild type Escherichia coli Pyridoxal 5'-phosphate homeostasis protein (YGGS)
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-10
Authors: Donkor, A.K., Ghatge, M.S., Safo, M.K., Musayev, F.N.
PDB entry 7u9d: Crystal Structure of Human Phosphatidylcholine Transfer Protein in Complex with PC(16:0/20:4)
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-03-10
Authors: Druzak, S.A.
PDB entry 7u9e: Pfs230 D1 domain in complex with 230AL-26
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2022-03-10
Authors: Tang, W.K., Tolia, N.H.
PDB entry 7u9f: Integrin alpha IIB beta3 complex with BMS compound 4 in Mn2+
Classification: BLOOD CLOTTING/INHIBITOR
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.70001 Å
Deposited: 2022-03-10
Authors: Lin, F.-Y., Zhu, J., Zhu, J., Springer, T.A.
PDB entry 7u9g: Rabies virus glycoprotein pre-fusion trimer in complex with neutralizing antibody RVA122
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Rabies virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2022-03-10
Authors: Callaway, H.M., Zyla, D., Larrous, F., Dias de Melo, G., Hastie, K.M., Avalos, R.D., Agarwal, A., Bouhry, H., Corti, D., Saphire, E.O.
PDB entry 7u9h: Crystal Structure of Escherichia coli apo Pyridoxal 5'-phosphate homeostasis protein (YGGS)
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-10
Authors: Donkor, A.K., Ghatge, M.S., Musayev, F.N., Safo, M.K.
PDB entry 7u9i: Co-crystal structure of human CARM1 in complex with MT556 inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-10
Authors: Zeng, H., Perveen, S., Dong, A., Hutchinson, A., Seitova, A., Gibson, E., Hajian, T., Li, Y., Gao, Y.D., Schneider, S., Siliphaivanh, P., Sloman, D., Nicholson, B., Fischer, C., Hicks, J., Vedadi, M., Brown, P.J., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 7u9j: Crystal structure of Mesothelin-207 fragment
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-03-10
Authors: Zhan, J., Esser, L., Lin, D., Tang, W.K., Xia, D.
PDB entry 7u9k: Staphylococcus aureus D-alanine-D-alanine ligase in complex with ATP, D-ala-D-ala, Mg2+ and K+
Classification: LIGASE
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-10
Authors: Pederick, J.L., Bruning, J.B.
PDB entry 7u9n: S48A Horse Liver Alcohol Dehydrogenase in Complex with NADH and N-Cyclohexylformamide
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-03-11
Authors: Zheng, C., Boxer, S.G.
PDB entry 7u9o: SARS-CoV-2 spike trimer RBD in complex with Fab NE12
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-03-11
Authors: Tsybovsky, Y., Kwong, P.D., Farci, P.
PDB entry 7u9p: SARS-CoV-2 spike trimer RBD in complex with Fab NA8
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-03-11
Authors: Tsybovsky, Y., Kwong, P.D., Farci, P.
PDB entry 7u9q: Structure of PKA phosphorylated human RyR2 in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7u9r: Structure of PKA phosphorylated human RyR2 in the open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7u9s: Crystal structure of human D-amino acid oxidase in complex with inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-11
Authors: Skene, R.J., Bell, J.A.
PDB entry 7u9t: Structure of PKA phosphorylated human RyR2 in the closed state in the presence of Calmodulin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7u9u: Crystal structure of human D-amino acid oxidase in complex with inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2022-03-11
Authors: Skene, R.J., Bell, J.A.
PDB entry 7u9v: Integrin alpha IIB beta3 complex with BMS4-1
Classification: BLOOD CLOTTING/INHIBITOR
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25492 Å
Deposited: 2022-03-11
Authors: Zhu, J., Lin, F.-Y., Zhu, J., Springer, T.A.
PDB entry 7u9w: Pfs230 D1 domain in complex with 230AS-88
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2022-03-11
Authors: Tang, W.K., Tolia, N.H.
PDB entry 7u9x: Structure of PKA phosphorylated human RyR2-R2474S in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7u9y: WDR5 bound to 2-(3,5-dimethoxybenzyl)-7-((2-methyl-1H-imidazol-1-yl)methyl)-5-(1-methyl-3-(trifluoromethyl)-1H-pyrazol-4-yl)-3,4-dihydroisoquinolin-1(2H)-one
Classification: Transcription/Transcription Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-11
Authors: Rietz, T.
PDB entry 7u9z: Structure of PKA phosphorylated human RyR2-R2474S in the open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7ua1: Structure of PKA phosphorylated human RyR2-R2474S in the closed state in the presence of ARM210
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7ua2: Pfs230 D1 domain in complex with 230AL-18
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-03-11
Authors: Tang, W.K., Tolia, N.H.
PDB entry 7ua3: Structure of PKA phosphorylated human RyR2-R2474S in the closed state in the presence of Calmodulin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7ua4: Structure of PKA phosphorylated human RyR2-R2474S in the open state in the presence of Calmodulin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7ua5: Structure of dephosphorylated human RyR2 in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7ua6: Horse liver alcohol dehydrogenase with NAD and trifluoroethanol at 25K
Classification: METAL BINDING PROTEIN, Oxidoreductase
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-03-11
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7ua7: Crystal structure of indoline 9 with KPC-2
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.247 Å
Deposited: 2022-03-11
Authors: Akhtar, A., Chen, Y.
PDB entry 7ua8: Pfs230 D1 domain in complex with 230AL-20
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-03-11
Authors: Tang, W.K., Tolia, N.H.
PDB entry 7ua9: Structure of dephosphorylated human RyR2 in the open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2022-03-11
Authors: Miotto, M.C., Marks, A.R.
PDB entry 7uaa: CryoEM structure of the pancreatic ATP-sensitive potassium channel in the ATP-bound state with Kir6.2-CTD in the up conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.7 Å
Deposited: 2022-03-11
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7uab: Human pro-meprin alpha (zymogen state)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-03-12
Authors: Bayly-Jones, C., Lupton, C.J., Fritz, C., Schlenzig, D., Whisstock, J.C.
PDB entry 7uac: Human pro-meprin alpha (zymogen state)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-03-12
Authors: Bayly-Jones, C., Lupton, C.J., Fritz, C., Schlenzig, D., Whisstock, J.C.
PDB entry 7uad: Crystal structure of human PTPN2 with inhibitor ABBV-CLS-484
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.044 Å
Deposited: 2022-03-12
Authors: Longenecker, K.L., Qiu, W., Sun, Q., Frost, J.M.
PDB entry 7uae: Human meprin alpha (active state)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-03-12
Authors: Bayly-Jones, C., Lupton, C.J., Fritz, C., Schlenzig, D., Whisstock, J.C.
PDB entry 7uaf: Human meprin alpha inhibitory complex with compound 10d (N~3~,N~3~-bis[(2H-1,3-benzodioxol-5-yl)methyl]-N-hydroxy-beta-alaninamide)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-03-12
Authors: Bayly-Jones, C., Lupton, C.J., Fritz, C., Schlenzig, D., Whisstock, J.C.
PDB entry 7uag: Structure of G6PD-WT dimer
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-03-12
Authors: Wei, X., Marmorstein, R.
PDB entry 7uah: Macrocyclic plasmin inhibitor
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-03-12
Authors: Guojie, W.
PDB entry 7uai: Meprin alpha helix in complex with fetuin-B
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-03-13
Authors: Bayly-Jones, C., Lupton, C.J., Fritz, C., Schlenzig, D., Whisstock, J.C.
PDB entry 7uaj: Crystal structure of apo HPV16 E6
Classification: VIRAL PROTEIN
Source organism: Escherichia coli (strain K12); Human papillomavirus type 16
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2022-03-13
Authors: Shen, Q., Leonard, P.G., Cross, J.B.
PDB entry 7uak: Structure of recombinantly assembled A53E alpha-synuclein fibrils
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2022-03-13
Authors: Zhou, K., Zhou, H.
PDB entry 7ual: Structure of G6PD-D200N tetramer bound to NADP+ and G6P with no symmetry applied
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-03-13
Authors: Wei, X., Marmorstein, R.
PDB entry 7uam: Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with (6-(3-(4,4-difluoropiperidin-1-yl)propyl)-4-methylpyridin-2-amine)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.837 Å
Deposited: 2022-03-13
Authors: Li, H., Poulos, T.L.
PDB entry 7uan: Structure of rat neuronal nitric oxide synthase R349A heme domain in complex with (6-(3-(4,4-difluoropiperidin-1-yl)propyl)-4-methylpyridin-2-amine)
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6969 Å
Deposited: 2022-03-13
Authors: Li, H., Poulos, T.L.
PDB entry 7uao: Structure of human endothelial nitric oxide synthase heme domain in complex with (6-(3-(4,4-difluoropiperidin-1-yl)propyl)-4-methylpyridin-2-amine)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-13
Authors: Li, H., Poulos, T.L.
PDB entry 7uap: Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1520
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-03-13
Authors: Barnes, C.O.
PDB entry 7uaq: Structure of the SARS-CoV-2 NTD in complex with C1520, local refinement
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-13
Authors: Barnes, C.O.
PDB entry 7uar: Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1717
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-03-13
Authors: Barnes, C.O.
PDB entry 7uas: Discovery of Potent Orally Bioavailable WD Repeat Domain 5 (WDR5) Inhibitors Using a Pharmacophore-Based Optimization
Classification: Transcription/Transcription Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.808 Å
Deposited: 2022-03-14
Authors: Zhao, B.
PDB entry 7uat: The crystal structure of the K36A mutant of E. coli YGGS in complex with PLP
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-14
Authors: Donkor, A.K., Ghatge, M.S., Musayev, F.N., Safo, M.K.
PDB entry 7uau: The crystal structure of the K137A mutant of E. coli YGGS in complex with PLP
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-14
Authors: Donkor, A.K., Ghatge, M.S., Musayev, F.N., Safo, M.K.
PDB entry 7uav: Structure of Clostridium botulinum prophage Tad1 in apo state
Classification: VIRAL PROTEIN
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-03-14
Authors: Lu, A., Leavitt, A., Yirmiya, E., Amitai, G., Garb, J., Morehouse, B.R., Hobbs, S.J., Sorek, R., Kranzusch, P.J.
PDB entry 7uaw: Structure of Clostridium botulinum prophage Tad1 in complex with 1''-2' gcADPR
Classification: VIRAL PROTEIN
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2022-03-14
Authors: Lu, A., Leavitt, A., Yirmiya, E., Amitai, G., Garb, J., Morehouse, B.R., Hobbs, S.J., Sorek, R., Kranzusch, P.J.
PDB entry 7uax: The crystal structure of the K36A/K38A double mutant of E. coli YGGS in complex with PLP
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2022-03-14
Authors: Donkor, A.K., Ghatge, M.S., Musayev, F.N., Safo, M.K.
PDB entry 7uay: Crystal structure of human CYP3A4 with the caged inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2022-03-14
Authors: Sevrioukova, I.F.
PDB entry 7uaz: Crystal structure of human CYP3A4 with the caged inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-03-14
Authors: Sevrioukova, I.F.
PDB entry 7ub0: SARS-CoV-2 Omicron-BA.2 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron-BA.2)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2022-03-14
Authors: Stalls, V., Acharya, P.
PDB entry 7ub2: Structure of RecT protein from Listeria innoccua phage A118 in complex with 83-mer annealed duplex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Listeria innocua Clip11262; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-03-14
Authors: Bell, C.E., Caldwell, B.J.
PDB entry 7ub4: The crystal structure of the K36A/K38A/K233A/K234A quadruple mutant of E. coli YGGS in complex with PLP
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-03-14
Authors: Donkor, A.K., Ghatge, M.S., Musayev, F.N., Safo, M.K.
PDB entry 7ub5: SARS-CoV-2 Omicron-BA.2 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron-BA.2)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2022-03-14
Authors: Stalls, V., Acharya, P.
PDB entry 7ub6: SARS-CoV-2 Omicron-BA.2 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron-BA.2)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2022-03-14
Authors: Stalls, V., Acharya, P.
PDB entry 7ub8: The crystal structure of the K38A/K137A/K233A/K234A quadruple mutant of E. coli YGGS in complex with PLP
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-03-14
Authors: Donkor, A.K., Ghatge, M.S., Musayev, F.N., Safo, M.K.
PDB entry 7uba: Structure of fungal Hop1 CBR domain
Classification: DNA BINDING PROTEIN
Source organism: Vanderwaltozyma polyspora DSM 70294
Experimental method: X-RAY DIFFRACTION
Resolution: 1.599 Å
Deposited: 2022-03-14
Authors: Ur, S.N., Corbett, K.D.
PDB entry 7ubb: Structure of RecT protein from Listeria innoccua phage A118 in complex with 83-mer ssDNA
Classification: DNA BINDING PROTEIN
Source organism: Listeria innocua Clip11262
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-03-14
Authors: Bell, C.E., Caldwell, B.J.
PDB entry 7ubc: Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in d6-DMSO with cis/trans switching
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-03-14
Authors: Ramelot, T.A., Tejero, R., Monteltione, G.T.
PDB entry 7ubd: Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in d6-DMSO with cis/trans switching (A-CC conformation)
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-03-14
Authors: Ramelot, T.A., Tejero, R., Montelione, G.T.
PDB entry 7ube: Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in d6-DMSO with cis/trans switching
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-03-14
Authors: Ramelot, T.A., Tejero, R., Montelione, G.T.
PDB entry 7ubf: Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in 50% d6-DMSO and 50% water with cis/trans switching (CC conformation, 50%)
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-03-14
Authors: Ramelot, T.A., Tejero, R., Montelione, G.T.
PDB entry 7ubg: Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in CDCl3 with cis/trans switching (A-TT conformation)
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-03-14
Authors: Ramelot, T.A., Tejero, R., Montelione, G.T.
PDB entry 7ubh: Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in CDCl3 with cis/trans switching
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-03-14
Authors: Ramelot, T.A., Tejero, R., Montelione, G.T.
PDB entry 7ubi: Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.21 in CDCl3 with cis/trans switching (TT conformation, 47%)
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-03-14
Authors: Ramelot, T.A., Tejero, R., Montelione, G.T.
PDB entry 7ubj: Transcription antitermination factor Qlambda, type-I crystal
Classification: GENE REGULATION
Source organism: Escherichia phage Lambda
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2022-03-15
Authors: Yin, Z., Ebright, R.H.
PDB entry 7ubk: Transcription antitermination factor Qlambda, type-II crystal
Classification: GENE REGULATION
Source organism: Escherichia phage Lambda
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-03-15
Authors: Yin, Z., Ebright, R.H.
PDB entry 7ubl: Transcription antitermination factor Qlambda in complex with Q-lambda-binding-element DNA
Classification: GENE REGULATION/DNA
Source organism: Escherichia phage Lambda; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.177 Å
Deposited: 2022-03-15
Authors: Yin, Z., Ebright, R.H.
PDB entry 7ubm: Transcription antitermination complex: ""pre-engaged"" Qlambda-loading complex
Classification: GENE REGULATION, TRANSFERASE/DNA/RNA
Source organism: Escherichia coli; Escherichia phage Lambda; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2022-03-15
Authors: Yin, Z., Ebright, R.H.
PDB entry 7ubn: Transcription antitermination complex: NusA-containing ""engaged"" Qlambda-loading complex
Classification: GENE REGULATION, TRANSFERASE/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2022-03-15
Authors: Yin, Z., Ebright, R.H.
PDB entry 7ubo: Crystal Structure of the first bromodomain of human BRDT in complex with the inhibitor CCD-956
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2022-03-15
Authors: Ta, H.M., Modukuri, R.K., Yu, Z., Tan, Z., Matzuk, M.M., Kim, C.
PDB entry 7ubp: The crystal structure of the K36A/K137A double mutant of E. coli YGGS in complex with PLP
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-03-15
Authors: Donkor, A.K., Ghatge, M.S., Musayev, F.N., Safo, M.K.
PDB entry 7ubq: The crystal structure of the wild-type of E. coli YGGS in complex with PNP
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-03-15
Authors: Donkor, A.K., Ghatge, M.S., Musayev, F.N., Safo, M.K.
PDB entry 7ubr: Integrin alpha IIB beta3 complex with GR144053
Classification: BLOOD CLOTTING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04993 Å
Deposited: 2022-03-15
Authors: Lin, F.-Y., Zhu, J., Zhu, J., Springer, T.A.
PDB entry 7ubs: Pfs230 D1 domain in complex with 230AS-26
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-15
Authors: Tang, W.K., Tolia, N.H.
PDB entry 7ubt: Stat5a Core in complex with Compound 18
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.352 Å
Deposited: 2022-03-15
Authors: Meagher, J.L., Stuckey, J.A.
PDB entry 7ubu: Crystal structure of ZMET2 in complex with hemimethylated CAG DNA and a histone H3Kc9me2 peptide
Classification: TRANSFERASE/DNA
Source organism: Zea mays; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2022-03-15
Authors: Fang, J., Song, J.
PDB entry 7ubx: Structure of a pore forming fragment of Clostridium difficile toxin A in complex with VHH AA6
Classification: TOXIN
Source organism: Camelidae; Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2022-03-15
Authors: Chen, B., Rongsheng, J., Kay, P.
PDB entry 7uby: Structure of the GTD domain of Clostridium difficile toxin A in complex with VHH AH3
Classification: TOXIN
Source organism: Camelidae; Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-15
Authors: Chen, B., Rongsheng, J., Kay, P.
PDB entry 7ubz: Chymotrypsin digested toxin/immunity complex for a T6SS lipase effector from E. cloacae
Classification: TOXIN/IMMUNE SYSTEM
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-03-15
Authors: Cuthbert, B.J., Jensen, S.J., Goulding, C.W., Hayes, C.S.
PDB entry 7uc2: Structure of G6PD-D200N tetramer bound to NADP+ with no symmetry applied
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-03-15
Authors: Wei, X., Marmorstein, R.
PDB entry 7uc3: Intramolecular ester bond-containing repeat domain from G. bergeri adhesin
Classification: CELL ADHESION
Source organism: Gemella bergeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.442 Å
Deposited: 2022-03-15
Authors: Wardega, J.K., Squire, C.J., Young, P.G.
PDB entry 7uc5: Crystal Structure of HLA A*0301 in complex with ILRGSVAHK, a 9-mer epitope from Influenza A
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-03-16
Authors: Gras, S., Nguyen, A.T., Szeto, C.
PDB entry 7uc6: Stat5a Core in complex with Compound 12
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.101 Å
Deposited: 2022-03-16
Authors: Meagher, J.L., Stuckey, J.A.
PDB entry 7uc7: Stat5a Core in complex with Compound 17
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.102 Å
Deposited: 2022-03-16
Authors: Meagher, J.L., Stuckey, J.A.
PDB entry 7uc8: Pfs230 D1 domain in complex with 230AS-73
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-03-16
Authors: Tang, W.K., Tolia, N.H.
PDB entry 7uc9: Horse liver alcohol dehydrogenase with NAD and trifluoroethanol at 45 K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-03-16
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7uca: Horse liver alcohol dehydrogenase with NAD and trifluoroethanol at 65 K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-03-16
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7ucc: Transcription factor FosB/JunD bZIP domain in the reduced form
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-03-16
Authors: Kumar, A., Machius, M.C., Rudenko, G.