LiteFold/PDB huggingface dataset:
PDB entry 1yw0: Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.
Classification: OXIDOREDUCTASE
Source organism: Xanthomonas campestris pv. campestris str. ATCC 33913
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2005-02-16
Authors: Vorobiev, S.M., Abashidze, M., Forouhar, F., Kuzin, A., Xiao, R., Ciano, M., Aton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 1yw1: Structure Of Ytnj From Bacillus Subtilis in complex with FMN
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2005-02-16
Authors: Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1yw2: Mutated Mus Musculus P38 Kinase (mP38)
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2005-02-16
Authors: Laughlin, S.K., Clark, M.P., Djung, J.F., Golebiowski, A., Brugel, T.A., Sabat, M., Bookland, R.G., Laufersweiler, M.J., Vanrens, J.C., Townes, J.A., De, B., Hsieh, L.C., Xu, S.C., Walter, R.L., Mekel, M.J., Janusz, M.J.
PDB entry 1yw4: Crystal Structure of the Succinylglutamate Desuccinylase from Chromobacterium violaceum, Northeast Structural Genomics Target CvR22.
Classification: HYDROLASE
Source organism: Chromobacterium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-17
Authors: Forouhar, F., Abashidze, M., Conover, K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 1yw5: Peptidyl-prolyl isomerase ESS1 from Candida albicans
Classification: ISOMERASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2005-02-17
Authors: Li, Z., Li, H., Devasahayam, G., Gemmill, T., Chaturvedi, V., Hanes, S.D., Van Roey, P.
PDB entry 1yw6: Crystal Structure of Succinylglutamate Desuccinylase from Escherichia coli, Northeast Structural Genomics Target ET72.
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2005-02-17
Authors: Forouhar, F., Yong, W., Kuzin, A.P., Ciano, M., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 1yw7: h-MetAP2 complexed with A444148
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2005-02-17
Authors: Park, C.H.
PDB entry 1yw8: h-MetAP2 complexed with A751277
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2005-02-17
Authors: Park, C.H.
PDB entry 1yw9: h-MetAP2 complexed with A849519
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2005-02-17
Authors: Park, C.H.
PDB entry 1ywa: 0.9 A Structure of NP4 from Rhodnius Prolixus complexed with CO at pH 5.6
Classification: LIGAND BINDING PROTEIN, BLOOD CLOTTING
Source organism: Rhodnius prolixus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.89 Å
Deposited: 2005-02-17
Authors: Maes, E.M., Weichsel, A., Roberts, S.A., Montfort, W.R.
PDB entry 1ywb: 0.9 A Structure of NP4 from Rhodnius Prolixus complexed with NO at pH 5.6
Classification: LIGAND BINDING PROTEIN, BLOOD CLOTTING
Source organism: Rhodnius prolixus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2005-02-17
Authors: Maes, E.M., Weichsel, A., Roberts, S.A., Montfort, W.R.
PDB entry 1ywc: Structure of the ferrous CO complex of NP4 from Rhodnius Prolixus at pH 7.0
Classification: LIGAND BINDING PROTEIN, BLOOD CLOTTING
Source organism: Rhodnius prolixus
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2005-02-17
Authors: Maes, E.M., Weichsel, A., Roberts, S.A., Montfort, W.R.
PDB entry 1ywd: 1.08 A Structure of Ferrous NP4 (aquo complex)
Classification: LIGAND BINDING PROTEIN, BLOOD CLOTTING
Source organism: Rhodnius prolixus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2005-02-17
Authors: Maes, E.M., Weichsel, A., Roberts, S.A., Montfort, W.R.
PDB entry 1ywf: Crystal Structure of Mycobacterium Tuberculosis Protein Tyrosine Phosphatase PtpB
Classification: UNKNOWN FUNCTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2005-02-17
Authors: Grundner, C., Ng, H.L., Alber, T., TB Structural Genomics Consortium (TBSGC)
PDB entry 1ywg: The structure of glyceraldehyde-3-phosphate dehydrogenase from Plasmodium falciparum
Classification: OXIDOREDUCTASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2005-02-17
Authors: Satchell, J.F., Klonis, N., Malby, R.L., Adisa, A., Alpyurek, A.E., Colman, P.M., Tilley, L.
PDB entry 1ywh: crystal structure of urokinase plasminogen activator receptor
Classification: HYDROLASE RECEPTOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2005-02-18
Authors: Llinas, P., Le Du, M.H., Gardsvoll, H., Dano, K., Ploug, M., Gilquin, B., Stura, E.A., Menez, A.
PDB entry 1ywi: Structure of the FBP11WW1 domain complexed to the peptide APPTPPPLPP
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2005-02-18
Authors: Pires, J.R., Parthier, C., Aido-Machado, R., Wiedemann, U., Otte, L., Boehm, G., Rudolph, R., Oschkinat, H.
PDB entry 1ywj: Structure of the FBP11WW1 domain
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-18
Authors: Pires, J.R., Parthier, C., Aido-Machado, R., Wiedemann, U., Otte, L., Boehm, G., Rudolph, R., Oschkinat, H.
PDB entry 1ywk: Crystal structure of 4-deoxy-1-threo-5-hexosulose-uronate ketol-isomerase from Enterococcus faecalis
Classification: ISOMERASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2005-02-18
Authors: Fedorov, A.A., Fedorov, E.V., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1ywl: Solution NMR structure of the protein EF2693 from E. faecalis: Northeast Structural Genomics Consortium target EFR36
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Enterococcus faecalis
Experimental method: SOLUTION NMR
Deposited: 2005-02-18
Authors: Northeast Structural Genomics Consortium (NESG)
PDB entry 1ywm: Crystal structure of the N-terminal domain of group B Streptococcus alpha C protein
Classification: SURFACE ACTIVE PROTEIN
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2005-02-18
Authors: Auperin, T.C., Bolduc, G.R., Baron, M.J., Heroux, A., Filman, D.J., Madoff, L.C., Hogle, J.M.
PDB entry 1ywn: Vegfr2 in complex with a novel 4-amino-furo[2,3-d]pyrimidine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2005-02-18
Authors: Miyazaki, Y., Matsunaga, S., Tang, J., Maeda, Y., Nakano, M., Philippe, R.J., Shibahara, M., Liu, W., Sato, H., Wang, L., Nolte, R.T.
PDB entry 1ywo: Phospholipase Cgamma1 SH3 in complex with a SLP-76 motif
Classification: HYDROLASE, SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2005-02-18
Authors: Deng, L., Velikovsky, C.A., Swaminathan, C.P., Cho, S., Mariuzza, R.A.
PDB entry 1ywp: Phospholipase Cgamma1 SH3
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2005-02-18
Authors: Deng, L., Velikovsky, C.A., Swaminathan, C.P., Cho, S., Mariuzza, R.A.
PDB entry 1ywq: Crystal structure of a nitroreductase family protein from Bacillus cereus ATCC 14579
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2005-02-18
Authors: Midwest Center for Structural Genomics (MCSG)
PDB entry 1ywr: Crystal Structure Analysis of inactive P38 kinase domain in complex with a Monocyclic Pyrazolone Inhibitor
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2005-02-18
Authors: Golebiowski, A., Townes, J.A., Laufersweiler, M.J., Brugel, T.A., Clark, M.P., Clark, C.M., Djung, J.F., Laughlin, S.K., Sabat, M.P., Bookland, R.G., Vanrens, J.C., De, B., Hsieh, L.C., Janusz, M.J., Walter, R.L., Webster, M.E., Mekel, M.J.
PDB entry 1yws: Solution structure of YBL071w-A from Saccharomyces cerevisiae.
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR
Deposited: 2005-02-18
Authors: Lukin, J.A., Guido, V., Arrowsmith, C.H., Northeast Structural Genomics Consortium (NESG)
PDB entry 1ywt: Crystal structure of the human sigma isoform of 14-3-3 in complex with a mode-1 phosphopeptide
Classification: SIGNALING PROTEIN/DE NOVO PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2005-02-18
Authors: Wilker, E.W., Grant, R.A., Artim, S.C., Yaffe, M.B.
PDB entry 1ywu: Solution NMR structure of Pseudomonas Aeruginosa protein PA4608. Northeast Structural Genomics target PaT7
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa
Experimental method: SOLUTION NMR
Deposited: 2005-02-18
Authors: Ramelot, T.A., Yee, A.A., Cort, J.R., Semesi, A., Arrowsmith, C.H., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)
PDB entry 1ywv: Crystal Structures of Proto-Oncogene Kinase Pim1: a Target of Aberrant Somatic Hypermutations in Diffuse Large Cell Lymphoma
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-18
Authors: Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
PDB entry 1yww: NMR structure of P. aeruginosa protein PA4738: Northeast Structural Genomics Consortium target PaP2
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa
Experimental method: SOLUTION NMR
Deposited: 2005-02-18
Authors: Cort, J.R., Ni, S., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)
PDB entry 1ywx: Solution Structure of Methanococcus maripaludis Protein MMP0443: The Northeast Structural Genomics Consortium Target MrR16
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Methanococcus maripaludis
Experimental method: SOLUTION NMR
Deposited: 2005-02-18
Authors: Yang, C.S., Acton, T., Shen, Y., Ma, L., Liu, G., Xiao, R., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
PDB entry 1ywy: Solution Structure of Pseudomonas aeruginosa Protein PA2021. The Northeast Structural Genomics Consortium Target Pat85.
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa
Experimental method: SOLUTION NMR
Deposited: 2005-02-18
Authors: Lin, Y.C., Liu, G., Shen, Y., Yee, A., Arrowsmith, C.H., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
PDB entry 1yx0: Solution Structure of Bacillus subtilis Protein ysnE: The Northeast Structural Genomics Consortium Target SR220
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: SOLUTION NMR
Deposited: 2005-02-18
Authors: Liu, G., Ma, L., Shen, Y., Xiao, R., Acton, T., Montelione, G.T., Szyperski, T., Northeast Structural Genomics Consortium (NESG)
PDB entry 1yx1: Crystal Structure of Protein of Unknown Function PA2260 from Pseudomonas aeruginosa, Possible Sugar Phosphate Isomerase
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2005-02-19
Authors: Osipiuk, J., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1yx2: Crystal Structure of the Probable Aminomethyltransferase from Bacillus subtilis
Classification: TRANSFERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2005-02-19
Authors: Midwest Center for Structural Genomics (MCSG)
PDB entry 1yx3: NMR structure of Allochromatium vinosum DsrC: Northeast Structural Genomics Consortium target OP4
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Allochromatium vinosum
Experimental method: SOLUTION NMR
Deposited: 2005-02-19
Authors: Cort, J.R., Dahl, C., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)
PDB entry 1yx4: Structure of S5a bound to monoubiquitin provides a model for polyubiquitin recognition
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-19
Authors: Wang, Q., Young, P., Walters, K.J.
PDB entry 1yx5: Solution Structure of S5a UIM-1/Ubiquitin Complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-19
Authors: Wang, Q., Young, P., Walters, K.J.
PDB entry 1yx6: Solution Structure of S5a UIM-2/Ubiquitin Complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-19
Authors: Wang, Q., Young, P., Walters, K.J.
PDB entry 1yx7: NMR structure of Calsensin, energy minimized average structure.
Classification: METAL BINDING PROTEIN
Source organism: Haemopis marmorata
Experimental method: SOLUTION NMR
Deposited: 2005-02-19
Authors: Venkitaramani, D.V., Fulton, D.B., Andreotti, A.H., Johansen, K.M., Johansen, J.
PDB entry 1yx8: NMR structure of Calsensin, 20 low energy structures.
Classification: METAL BINDING PROTEIN
Source organism: Haemopis marmorata
Experimental method: SOLUTION NMR
Deposited: 2005-02-19
Authors: Venkitaramani, D.V., Fulton, D.B., Andreotti, A.H., Johansen, K.M., Johansen, J.
PDB entry 1yx9: Effect of Dimethyl Sulphoxide on the crystal structure of Porcine Pepsin
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2005-02-20
Authors: Kesavulu, M.M., Ramasubramanian, S., Suguna, K.
PDB entry 1yxa: Serpina3n, a murine orthologue of human antichymotrypsin
Classification: HYDROLASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2005-02-20
Authors: Horvath, A.J., Irving, J.A., Law, R.H., Rossjohn, J., Bottomley, S.P., Quinsey, N.S., Pike, R.N., Coughlin, P.B., Whisstock, J.C.
PDB entry 1yxb: Crystal structure of Phosphoribosyl-ATP pyrophosphatase from Streptomyces coelicolor. NESG target RR8.
Classification: HYDROLASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2005-02-20
Authors: Benach, J., Kuzin, A.P., Forouhar, F., Abashidze, M., Vorobiev, S.M., Rong, X., Acton, T.B., Montelione, G.T., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 1yxc: Structure of E. coli dihydrodipicolinate synthase to 1.9 A
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2005-02-20
Authors: Dobson, R.C.J., Griffin, M.D.W., Jameson, G.B., Gerrard, J.A.
PDB entry 1yxd: Structure of E. coli dihydrodipicolinate synthase bound with allosteric inhibitor (S)-lysine to 2.0 A
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-20
Authors: Dobson, R.C.J., Griffin, M.D.W., Jameson, G.B., Gerrard, J.A.
PDB entry 1yxe: Structure and inter-domain interactions of domain II from the blood stage malarial protein, apical membrane antigen 1
Classification: IMMUNE SYSTEM
Source organism: Plasmodium falciparum
Experimental method: SOLUTION NMR
Deposited: 2005-02-21
Authors: Feng, Z.P., Keizer, D.W., Stevenson, R.A., Yao, S., Babon, J.J., Murphy, V.J., Anders, R.F., Norton, R.S.
PDB entry 1yxh: Crystal structure of a novel phospholipase A2 from Naja naja sagittifera with a strong anticoagulant activity
Classification: HYDROLASE
Source organism: Naja sagittifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2005-02-21
Authors: Jabeen, T., Singh, N., Singh, R.K., Sharma, S., Srinivasan, A., Singh, T.P.
PDB entry 1yxi: R-State AMP Complex Reveals Initial Steps of the Quaternary Transition of Fructose-1,6-bisphosphatase
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-21
Authors: Iancu, C.V., Mukund, S., Fromm, H.J., Honzatko, R.B.
PDB entry 1yxj: Crystal structure of human lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) at low pH
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2005-02-22
Authors: Ohki, I., Ishigaki, T., Oyama, T., Matsunaga, S., Xie, Q., Ohnishi-Kameyama, M., Murata, T., Tsuchiya, D., Machida, S., Morikawa, K., Tate, S.
PDB entry 1yxk: Crystal structure of human lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) disulfide-linked dimer
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2005-02-22
Authors: Ohki, I., Ishigaki, T., Oyama, T., Matsunaga, S., Xie, Q., Ohnishi-Kameyama, M., Murata, T., Tsuchiya, D., Machida, S., Morikawa, K., Tate, S.
PDB entry 1yxl: Crystal structure of a novel phospholipase A2 from Naja naja sagittifera at 1.5 A resolution
Classification: HYDROLASE
Source organism: Naja sagittifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.477 Å
Deposited: 2005-02-22
Authors: Singh, R.K., Jabeen, T., Sharma, S., Kaur, P., Singh, T.P.
PDB entry 1yxm: Crystal structure of peroxisomal trans 2-enoyl CoA reductase
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2005-02-22
Authors: Jansson, A., Ng, S., Arrowsmith, C., Sharma, S., Edwards, A.M., Von Delft, F., Sundstrom, M., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 1yxn: Pseudo-atomic model of a fiberless isometric variant of bacteriophage phi29
Classification: VIRUS
Source organism: Bacillus phage phi29
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.9 Å
Deposited: 2005-02-22
Authors: Morais, M.C., Choi, K.H., Koti, J.S., Chipman, P.R., Anderson, D.L., Rossmann, M.G.
PDB entry 1yxo: Crystal Structure of pyridoxal phosphate biosynthetic protein PdxA PA0593
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2005-02-22
Authors: Liu, Y., Xu, X., Dong, A., Kudritskam, M., Savchenko, A., Pai, E.F., Joachimiak, A., Edwards, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1yxp: HIV-1 DIS RNA subtype F- Zn soaked
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2005-02-22
Authors: Ennifar, E., Dumas, P.
PDB entry 1yxq: Crystal structure of actin in complex with swinholide A
Classification: CONTRACTILE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2005-02-22
Authors: Klenchin, V.A., King, R., Tanaka, J., Marriott, G., Rayment, I.
PDB entry 1yxr: NMR Structure of VPS4A MIT Domain
Classification: PROTEIN TRAFFICKING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-22
Authors: Scott, J.A., Gaspar, J., Stuchell, M., Alam, S., Skalicky, J., Sundquist, W.I.
PDB entry 1yxs: Crystal Structure of Kinase Pim1 with P123M mutation
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2005-02-22
Authors: Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
PDB entry 1yxt: Crystal Structure of Kinase Pim1 in complex with AMPPNP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-22
Authors: Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
PDB entry 1yxu: Crystal Structure of Kinase Pim1 in Complex with AMP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2005-02-22
Authors: Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
PDB entry 1yxv: Crystal Structure of Kinase Pim1 in complex with 3,4-Dihydroxy-1-methylquinolin-2(1H)-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-22
Authors: Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
PDB entry 1yxw: A common binding site for disialyllactose and a tri-peptide in the C-fragment of tetanus neurotoxin
Classification: HYDROLASE
Source organism: Clostridium tetani
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2005-02-22
Authors: Jayaraman, S., Eswaramoorthy, S., Kumaran, D., Swaminathan, S.
PDB entry 1yxx: Crystal Structure of Kinase Pim1 in complex with (3E)-3-[(4-HYDROXYPHENYL)IMINO]-1H-INDOL-2(3H)-ONE
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-22
Authors: Kumar, A., Mandiyan, V., Suzuki, Y., Zhang, C., Rice, J., Tsai, J., Artis, D.R., Ibrahim, P., Bremer, R.
PDB entry 1yxy: Crystal Structure of putative N-acetylmannosamine-6-P epimerase from Streptococcus pyogenes (APC29713) Structural genomics, MCSG
Classification: ISOMERASE
Source organism: Streptococcus pyogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2005-02-22
Authors: Rotella, F.J., Zhang, R.G., Lezondra, L.E.O., Collart, F.R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1yy0: Crystal structure of an RNA duplex containing a 2'-amine substitution and a 2'-amide product produced by in-crystal acylation at a C-A mismatch
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2005-02-23
Authors: Gherghe, C.M., Krahn, J.M., Weeks, K.M.
PDB entry 1yy1: NMR Conformational Analysis of LHRH and its analogues
Classification: HORMONE/GROWTH FACTOR
Experimental method: SOLUTION NMR
Deposited: 2005-02-23
Authors: Spyroulias, G.A., Zompra, A., Magafa, V., Cordopatis, P.
PDB entry 1yy2: NMR Conformational Analysis of LHRH and its analogues
Classification: ANTITUMOR PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2005-02-23
Authors: Spyroulias, G.A., Zompra, A., Magafa, V., Cordopatis, P.
PDB entry 1yy3: Structure of S-Adenosylmethionine:tRNA Ribosyltransferase-Isomerase (QueA)
Classification: ISOMERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2005-02-23
Authors: Grimm, C., Ficner, R., Reuter, K.
PDB entry 1yy4: Crystal structure of estrogen receptor beta complexed with 1-chloro-6-(4-hydroxy-phenyl)-naphthalen-2-ol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2005-02-23
Authors: Mewshaw, R.E., Edsall Jr., R.J., Yang, C., Manas, E.S., Xu, Z.B., Henderson, R.A., Keith Jr., J.C., Harris, H.A.
PDB entry 1yy5: Crystal structure of Fms1, a polyamine oxidase from Yeast
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2005-02-23
Authors: Huang, Q., Liu, Q., Hao, Q.
PDB entry 1yy6: The Crystal Structure of the N-terminal domain of HAUSP/USP7 complexed with an EBNA1 peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2005-02-23
Authors: Saridakis, V., Sheng, Y., Sarkari, F., Holowaty, M., Shire, K., Nguyen, T., Zhang, R., Liao, J., Lee, W., Edwards, A.M., Arrowsmith, C.H., Frappier, L.
PDB entry 1yy7: Crystal structure of stringent starvation protein A (SspA), an RNA polymerase-associated transcription factor
Classification: TRANSCRIPTION
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2005-02-23
Authors: Hansen, A.-M., Gu, Y., Li, M., Andrykovitch, M., Waugh, D.S., Jin, D.J., Ji, X.
PDB entry 1yy8: Crystal structure of the Fab fragment from the monoclonal antibody cetuximab/Erbitux/IMC-C225
Classification: IMMUNE SYSTEM
Source organism: Mus musculus, Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-24
Authors: Li, S., Schmitz, K.R., Jeffrey, P.D., Wiltzius, J.J.W., Kussie, P., Ferguson, K.M.
PDB entry 1yy9: Structure of the extracellular domain of the epidermal growth factor receptor in complex with the Fab fragment of cetuximab/Erbitux/IMC-C225
Classification: IMMUNE SYSTEM/Transferase
Source organism: Homo sapiens; Mus musculus, Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.605 Å
Deposited: 2005-02-24
Authors: Li, S., Schmitz, K.R., Jeffrey, P.D., Wiltzius, J.J.W., Kussie, P., Ferguson, K.M.
PDB entry 1yya: Crystal structure of TT0473, putative Triosephosphate Isomerase from Thermus thermophilus HB8
Classification: ISOMERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2005-02-24
Authors: Yamamoto, H., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1yyb: Solution structure of 1-26 fragment of human programmed cell death 5 protein
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-24
Authors: Liu, D.S., Feng, Y.G., Yao, H.W., Wang, J.F.
PDB entry 1yyc: Solution Structure of a putative late embryogenesis abundant (LEA) protein At2g46140.1
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 2005-02-24
Authors: Center for Eukaryotic Structural Genomics (CESG), Song, J., Tyler, R.C., Lee, M.S., Markley, J.L.
PDB entry 1yyd: High Resolution Crystal Structure of Manganese Peroxidase
Classification: OXIDOREDUCTASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2005-02-24
Authors: Sundaramoorthy, M., Youngs, H.L., Gold, M.H., Poulos, T.L.
PDB entry 1yye: Crystal structure of estrogen receptor beta complexed with way-202196
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2005-02-24
Authors: Mewshaw, R.E., Edsall Jr., R.J., Yang, C., Manas, E.S., Xu, Z.B., Henderson, R.A., Keith Jr., J.C., Harris, H.A.
PDB entry 1yyf: Correction of X-ray Intensities from an HslV-HslU co-crystal containing lattice translocation defects
Classification: CHAPERONE/HYDROLASE
Source organism: Bacillus subtilis; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 4.16 Å
Deposited: 2005-02-24
Authors: Wang, J., Rho, S.H., Park, H.H., Eom, S.H.
PDB entry 1yyg: Manganese peroxidase complexed with Cd(II) inhibitor
Classification: OXIDOREDUCTASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2005-02-24
Authors: Sundaramoorthy, M., Youngs, H.L., Gold, M.H., Poulos, T.L.
PDB entry 1yyh: Crystal structure of the human Notch 1 ankyrin domain
Classification: CELL CYCLE,TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2005-02-25
Authors: Ehebauer, M.T., Chirgadze, D.Y., Hayward, P., Martinez-Arias, A., Blundell, T.L.
PDB entry 1yyj: The NMR solution structure of a redesigned apocytochrome b562:Rd-apocyt b562
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2005-02-25
Authors: Feng, H., Takei, J., Lipsitz, R., Tjandra, N., Bai, Y., Berkeley Structural Genomics Center (BSGC)
PDB entry 1yyk: Crystal structure of RNase III from Aquifex Aeolicus complexed with double-stranded RNA at 2.5-angstrom resolution
Classification: HYDROLASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2005-02-25
Authors: Gan, J., Tropea, J.E., Austin, B.P., Court, D.L., Waugh, D.S., Ji, X.
PDB entry 1yyl: crystal structure of CD4M33, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 gp120 envelope glycoprotein and anti-HIV-1 antibody 17b
Classification: Viral protein/Immune system
Source organism: Homo sapiens; Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2005-02-25
Authors: Huang, C.C., Stricher, F., Martin, L., Decker, J.M., Majeed, S., Barthe, P., Hendrickson, W.A., Robinson, J., Roumestand, C., Sodroski, J., Wyatt, R., Shaw, G.M., Vita, C., Kwong, P.D.
PDB entry 1yym: crystal structure of F23, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 gp120 envelope glycoprotein and anti-HIV-1 antibody 17b
Classification: Viral protein/Immune system
Source organism: Homo sapiens; Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2005-02-25
Authors: Huang, C.C., Stricher, F., Martin, L., Decker, J.M., Majeed, S., Barthe, P., Hendrickson, W.A., Robinson, J., Roumestand, C., Sodroski, J., Wyatt, R., Shaw, G.M., Vita, C., Kwong, P.D.
PDB entry 1yyn: A common binding site for disialyllactose and a tri-peptide in the C-fragment of tetanus neurotoxin
Classification: HYDROLASE
Source organism: Clostridium tetani
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2005-02-25
Authors: Seetharaman, J., Eswaramoorthy, S., Kumaran, D., Swaminathan, S.
PDB entry 1yyo: Crystal structure of RNase III mutant E110K from Aquifex aeolicus complexed with double-stranded RNA at 2.9-Angstrom Resolution
Classification: HYDROLASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2005-02-25
Authors: Gan, J., Tropea, J.E., Austin, B.P., Court, D.L., Waugh, D.S., Ji, X.
PDB entry 1yyp: Crystal structure of cytomegalovirus UL44 bound to C-terminal peptide from CMV UL54
Classification: REPLICATION/TRANSFERASE
Source organism: Human herpesvirus 5; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2005-02-25
Authors: Appleton, B.A., Brooks, J., Loregian, A., Filman, D.J., Coen, D.M., Hogle, J.M.
PDB entry 1yyq: Y305F Trichodiene Synthase complexed with pyrophosphate
Classification: LYASE
Source organism: Fusarium sporotrichioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2005-02-25
Authors: Vedula, L.S., Rynkiewicz, M.J., Pyun, H.J., Coates, R.M., Cane, D.E., Christianson, D.W.
PDB entry 1yyr: Y305F Trichodiene Synthase: Complex With Mg, Pyrophosphate, and (4R)-7-azabisabolene
Classification: LYASE
Source organism: Fusarium sporotrichioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2005-02-25
Authors: Vedula, L.S., Rynkiewicz, M.J., Pyun, H.J., Coates, R.M., Cane, D.E., Christianson, D.W.
PDB entry 1yys: Y305F Trichodiene Synthase: Complex With Mg, Pyrophosphate, and (4S)-7-azabisabolene
Classification: LYASE
Source organism: Fusarium sporotrichioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2005-02-25
Authors: Vedula, L.S., Rynkiewicz, M.J., Pyun, H.J., Coates, R.M., Cane, D.E., Christianson, D.W.
PDB entry 1yyt: D100E Trichodiene Synthase: Complex With Mg, Pyrophosphate, and (4R)-7-azabisabolene
Classification: LYASE
Source organism: Fusarium sporotrichioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2005-02-25
Authors: Vedula, L.S., Rynkiewicz, M.J., Pyun, H.J., Coates, R.M., Cane, D.E., Christianson, D.W.
PDB entry 1yyu: D100E Trichodiene Synthase: Complex With Mg, Pyrophosphate, and (4S)-7-azabisabolene
Classification: LYASE
Source organism: Fusarium sporotrichioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2005-02-25
Authors: Vedula, L.S., Rynkiewicz, M.J., Pyun, H.J., Coates, R.M., Cane, D.E., Christianson, D.W.
PDB entry 1yyv: Putative transcriptional regulator ytfH from Salmonella typhimurium
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2005-02-25
Authors: Osipiuk, J., Quartey, P., Lezondra, L., Moy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1yyw: Crystal structure of RNase III from Aquifex aeolicus complexed with double stranded RNA at 2.8-Angstrom Resolution
Classification: HYDROLASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2005-02-25
Authors: Gan, J., Tropea, J.E., Austin, B.P., Court, D.L., Waugh, D.S., Ji, X.
PDB entry 1yyx: The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) at 2.8M urea
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2005-02-25
Authors: Feng, H., Vu, N., Bai, Y., Berkeley Structural Genomics Center (BSGC)
PDB entry 1yyy: Trypsin inhibitors with rigid tripeptidyl aldehydes
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 1998-06-03
Authors: Krishnan, R., Zhang, E., Hakansson, K., Arni, R.K., Tulinsky, A., Lim-Wilby, M.S.L., Levy, O.E., Semple, J.E., Brunck, T.K.
PDB entry 1yyz: R-State AMP Complex Reveals Initial Steps of the Quaternary Transition of Fructose-1,6-bisphosphatase
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2005-02-25
Authors: Iancu, C.V., Mukund, S., Fromm, H.J., Honzatko, R.B.
PDB entry 1yz0: R-State AMP Complex Reveals Initial Steps of the Quaternary Transition of Fructose-1,6-bisphosphatase
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2005-02-25
Authors: Iancu, C.V., Mukund, S., Fromm, H.J., Honzatko, R.B.
PDB entry 1yz1: Crystal structure of human translationally controlled tumour associated protein
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-26
Authors: Cavarelli, J., Moras, D., Amson, R., Telerman, A.
PDB entry 1yz2: Solution structure of Am2766
Classification: TOXIN
Source organism: Conus amadis
Experimental method: SOLUTION NMR
Deposited: 2005-02-26
Authors: Sarma, S.P., Kumar, G.S., Sudarslal, S., Iengar, P., Sikdar, S.K., Krishnan, K.S., Balaram, P.
PDB entry 1yz3: Structure of human pnmt complexed with cofactor product adohcy and inhibitor SK&F 64139
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2005-02-27
Authors: Wu, Q., Gee, C.L., Lin, F., Martin, J.L., Grunewald, G.L., McLeish, M.J.
PDB entry 1yz4: Crystal structure of DUSP15
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2005-02-28
Authors: Kim, S.J., Ryu, S.E., Jeong, D.G., Yoon, T.S., Kim, J.H., Cho, Y.H., Jeong, S.K., Lee, J.W., Son, J.H.
PDB entry 1yz5: The crystal structure of 14-3-3-sigma at 2.8 angstrom resolution
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2005-02-28
Authors: Benzinger, A., Popowicz, G.M., Holak, T.A., Hermeking, H.
PDB entry 1yz6: Crystal structure of intact alpha subunit of aIF2 from Pyrococcus abyssi
Classification: TRANSLATION
Source organism: Pyrococcus abyssi
Experimental method: X-RAY DIFFRACTION
Resolution: 3.37 Å
Deposited: 2005-02-28
Authors: Yatime, L., Schmitt, E., Blanquet, S., Mechulam, Y.
PDB entry 1yz7: Crystal structure of a C-terminal segment of the alpha subunit of aIF2 from Pyrococcus abyssi
Classification: TRANSLATION
Source organism: Pyrococcus abyssi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2005-02-28
Authors: Yatime, L., Schmitt, E., Blanquet, S., Mechulam, Y.
PDB entry 1yz9: Crystal structure of RNase III mutant E110Q from Aquifex aeolicus complexed with double stranded RNA at 2.1-Angstrom Resolution
Classification: HYDROLASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2005-02-28
Authors: Gan, J., Tropea, J.E., Austin, B.P., Court, D.L., Waugh, D.S., Ji, X.
PDB entry 1yza: The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N-terminal helix unfolded
Classification: ELECTRON TRANSPORT
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-28
Authors: Feng, H., Takei, T., Lipsitz, R., Tjandra, N., Bai, Y., Berkeley Structural Genomics Center (BSGC)
PDB entry 1yzb: Solution structure of the Josephin domain of Ataxin-3
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-28
Authors: Nicastro, G., Masino, L., Menon, R.P., Knowles, P.P., McDonald, N.Q., Pastore, A.
PDB entry 1yzc: The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N- and a part of the C-terminal helices unfolded
Classification: ELECTRON TRANSPORT
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-28
Authors: Feng, H., Zhou, Z., Bai, Y., Berkeley Structural Genomics Center (BSGC)
PDB entry 1yzd: Crystal structure of an RNA duplex containing a site specific 2'-amine substitution at a C-G Watson-Crick base pair
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2005-02-28
Authors: Gherghe, C.M., Krahn, J.M., Weeks, K.M.
PDB entry 1yze: Crystal structure of the N-terminal domain of USP7/HAUSP.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-28
Authors: Saridakis, V., Sheng, Y., Sarkari, F., Holowaty, M.N., Shire, K., Nguyen, T., Zhang, R.G., Liao, J., Lee, W., Edwards, A.M., Arrowsmith, C.H., Frappier, L.
PDB entry 1yzf: Crystal structure of the lipase/acylhydrolase from Enterococcus faecalis
Classification: HYDROLASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2005-02-28
Authors: Zhang, R., Hatzos, C., Clancy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1yzg: Structure of Human ADP-ribosylation factor-like 8
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-28
Authors: Choe, J., Atanassova, A., Arrowsmith, C., Edwards, A., Sundstrom, M., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 1yzh: Crystal Structure of the Conserved Hypothetical Protein, Methyltransferase from Streptococcus pneumoniae TIGR4
Classification: TRANSFERASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2005-02-28
Authors: Midwest Center for Structural Genomics (MCSG)
PDB entry 1yzi: A novel quaternary structure of human carbonmonoxy hemoglobin
Classification: OXYGEN STORAGE/TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2005-02-28
Authors: Safo, M.K., Abraham, D.J.
PDB entry 1yzk: GppNHp bound Rab11 GTPase
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-02-28
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1yzl: GppNHp-Bound Rab9 GTPase
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2005-02-28
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1yzm: Structure of Rabenosyn (458-503), Rab4 binding domain
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2005-02-28
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1yzn: GppNHp-Bound Ypt1p GTPase
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2005-02-28
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1yzp: Substrate-free manganese peroxidase
Classification: OXIDOREDUCTASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2005-02-28
Authors: Sundaramoorthy, M., Youngs, H.L., Gold, M.H., Poulos, T.L.
PDB entry 1yzq: GppNHp-Bound Rab6 GTPase
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2005-02-28
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1yzr: Manganese peroxidase-Sm(III) complex
Classification: OXIDOREDUCTASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2005-02-28
Authors: Sundaramoorthy, M., Youngs, H.L., Gold, M.H., Poulos, T.L.
PDB entry 1yzs: Solution structure of human sulfiredoxin (srx)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-02-28
Authors: Gruschus, J.M., Lee, D.Y., Ferretti, J.A., Rhee, S.G.
PDB entry 1yzt: GppNHp-Bound Rab21 GTPase at 2.05 A Resolution
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2005-02-28
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1yzu: GppNHp-Bound Rab21 GTPase at 2.50 A Resolution
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2005-02-28
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1yzv: HYPOTHETICAL PROTEIN FROM TRYPANOSOMA CRUZI
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2005-02-28
Authors: Caruthers, J., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
PDB entry 1yzw: The 2.1A Crystal Structure of the Far-red Fluorescent Protein HcRed: Inherent Conformational Flexibility of the Chromophore
Classification: LUMINESCENT PROTEIN
Source organism: Heteractis crispa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2005-02-28
Authors: Wilmann, P.G., Petersen, J., Pettikiriarachchi, A., Buckle, A.M., Devenish, R.J., Prescott, M., Rossjohn, J.
PDB entry 1yzx: Crystal structure of human kappa class glutathione transferase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2005-02-28
Authors: Li, J., Xia, Z., Ding, J.
PDB entry 1yzy: Crystal structure of Haemophilus influenzae protein HI1011, Pfam DUF1537
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2005-02-28
Authors: Patskovsky, Y., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1yzz: Humanized caban33 at room temperature
Classification: UNKNOWN FUNCTION
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2005-03-01
Authors: Conrath, K., Vincke, C., Stijlemans, B., Schymkowitz, J., Decanniere, K., Muyldermans, S., Loris, R.
PDB entry 1z00: Solution structure of the C-terminal domain of ERCC1 complexed with the C-terminal domain of XPF
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-03-01
Authors: Tripsianes, K., Folkers, G., Ab, E., Das, D., Odijk, H., Jaspers, N.G.J., Hoeijmakers, J.H.J., Kaptein, R., Boelens, R.
PDB entry 1z01: 2-Oxoquinoline 8-Monooxygenase Component: Active site Modulation by Rieske-[2fe-2S] Center Oxidation/Reduction
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2005-03-01
Authors: Martins, B.M., Svetlitchnaia, T., Dobbek, H.
PDB entry 1z02: 2-Oxoquinoline 8-Monooxygenase Component: Active site Modulation by Rieske-[2fe-2S] Center Oxidation/Reduction
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2005-03-01
Authors: Martins, B.M., Svetlitchnaia, T., Dobbek, H.
PDB entry 1z03: 2-Oxoquinoline 8-Monooxygenase Component: Active site Modulation by Rieske-[2fe-2S] Center Oxidation/Reduction
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2005-03-01
Authors: Martins, B.M., Svetlitchnaia, T., Dobbek, H.
PDB entry 1z05: Crystal structure of the ROK family transcriptional regulator, homolog of E.coli MLC protein.
Classification: TRANSCRIPTION
Source organism: Vibrio cholerae O1 biovar eltor
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2005-03-01
Authors: Minasov, G., Brunzelle, J.S., Shuvalova, L., Collart, F.R., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)
PDB entry 1z06: GppNHp-Bound Rab33 GTPase
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2005-03-01
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1z07: GppNHp-Bound Rab5c G55Q mutant GTPase
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2005-03-01
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1z08: GppNHp-Bound Rab21 Q53G mutant GTPase
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2005-03-01
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1z09: Solution structure of km23
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2005-03-01
Authors: Ilangovan, U., Ding, W., Mulder, K., Hinck, A.P., Zuniga, J., Trbovich, J.A., Demeler, B., Groppe, J.C.
PDB entry 1z0a: GDP-Bound Rab2A GTPase
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2005-03-01
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1z0b: Crystal Structure of A. fulgidus Lon proteolytic domain E506A mutant
Classification: HYDROLASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2005-03-01
Authors: Botos, I., Melnikov, E.E., Cherry, S., Kozlov, S., Makhovskaya, O.V., Tropea, J.E., Gustchina, A., Rotanova, T.V., Wlodawer, A.
PDB entry 1z0c: Crystal Structure of A. fulgidus Lon proteolytic domain D508A mutant
Classification: HYDROLASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2005-03-01
Authors: Botos, I., Melnikov, E.E., Cherry, S., Kozlov, S., Makhovskaya, O.V., Tropea, J.E., Gustchina, A., Rotanova, T.V., Wlodawer, A.
PDB entry 1z0d: GDP-Bound Rab5c GTPase
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2005-03-01
Authors: Eathiraj, S., Pan, X., Ritacco, C., Lambright, D.G.
PDB entry 1z0e: Crystal Structure of A. fulgidus Lon proteolytic domain
Classification: HYDROLASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2005-03-01
Authors: Botos, I., Melnikov, E.E., Cherry, S., Kozlov, S., Makhovskaya, O.V., Tropea, J.E., Gustchina, A., Rotanova, T.V., Wlodawer, A.