LiteFold/PDB huggingface dataset:
PDB entry 7k22: Murine polyomavirus pentavalent capsomer with 8A7H5 Fab, subparticle reconstruction
Classification: VIRAL PROTEIN
Source organism: Mus musculus polyomavirus 1; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-09-08
Authors: Goetschius, D.J., Hafenstein, S.L.
PDB entry 7k23: Murine polyomavirus hexavalent capsomer with 8A7H5 Fab, subparticle reconstruction
Classification: VIRAL PROTEIN
Source organism: Mus musculus polyomavirus 1; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-09-08
Authors: Goetschius, D.J., Hafenstein, S.L.
PDB entry 7k24: Murine polyomavirus pentavalent capsomer, subparticle reconstruction
Classification: VIRAL PROTEIN
Source organism: Mus musculus polyomavirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-09-08
Authors: Goetschius, D.J., Hafenstein, S.L.
PDB entry 7k25: Murine polyomavirus hexavalent capsomer, subparticle reconstruction
Classification: VIRAL PROTEIN
Source organism: Mus musculus polyomavirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-09-08
Authors: Goetschius, D.J., Hafenstein, S.L.
PDB entry 7k26: Crystal structure of Human H-chain Ferritin variant infused with Sodium Acrylate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-09-08
Authors: Bailey, J.B., Zhang, L.
PDB entry 7k27: Crystal structure of the tandem bromodomain (BD1, BD2) of human TAF1 bound to ATR inhibitor AZ20
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-09-08
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7k28: Kelch domain of human KEAP1 bound to Nrf2 peptide, ADEETGEFL
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k29: Kelch domain of human KEAP1 bound to Nrf2 peptide, LDEETGEAL
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2a: Kelch domain of human KEAP1 bound to Nrf2 peptide, LDEETGEFA
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2b: Kelch domain of human KEAP1 bound to Nrf2 peptide, ADEETGEFA
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2c: Kelch domain of human KEAP1 bound to Nrf2 peptide, ADEETGEAA
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2d: Kelch domain of human KEAP1 bound to Nrf2 linear peptide, Ac-GDEETGE-NH2
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2e: Kelch domain of human KEAP1 bound to Nrf2-based cyclic peptide, c[GDEETGE]
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2f: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[GAEETGE]
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2g: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[GDEEAGE]
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2h: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[GDPETGE]
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2i: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[GAPETGE]
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2j: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[GDPEAGE]
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2k: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[BAL-DEETGE]
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2l: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[BAL-NPETGE]
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2m: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[GEPETGE]
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2n: Kelch domain of human KEAP1 bound to Nrf2-based cyclic peptide, c[BAL-DEETGE]
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2o: Kelch domain of human KEAP1 bound to Nrf2-based cyclic peptide, c[GABA-DPETGE]
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2p: Kelch domain of human KEAP1 bound to Nrf2-based cyclic peptide, c[AVA-DPETGE]
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2q: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[Ahx-DPETGE]
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2r: Kelch domain of human KEAP1 bound to Nrf2-based cyclic peptide, c[LhA-DEETGE]
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2s: Kelch domain of human KEAP1 bound to Nrf2 cyclic peptide, c[DhA-GDPETGE]
Classification: PROTEIN BINDING/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2020-09-08
Authors: Muellers, S.N., Allen, K.N.
PDB entry 7k2t: Mg2+/ATP-bound structure of the full-length WzmWzt O antigen ABC transporter in lipid nanodiscs
Classification: TRANSPORT PROTEIN
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-09-09
Authors: Caffalette, C.A., Zimmer, J.
PDB entry 7k2u: DHODH IN COMPLEX WITH LIGAND 13
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2020-09-09
Authors: Shaffer, P.L.
PDB entry 7k2v: PIKfyve/Fig4/Vac14 complex centered on PIKfyve - map2
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.6 Å
Deposited: 2020-09-09
Authors: Lees, J.A., Reinisch, K.M., Li, P.
PDB entry 7k2w: Crystal structure of CTX-M-14 E166A/K234R Beta-lactamase in complex with hydrolyzed cefotaxime
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-09-09
Authors: Lu, S., Palzkill, T., Sankaran, B., Hu, L., Soeung, V., Prasad, B.V.V.
PDB entry 7k2x: Crystal structure of CTX-M-14 E166A/K234R Beta-lactamase
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-09
Authors: Lu, S., Palzkill, T., Sankaran, B., Hu, L., Soeung, V., Prasad, B.V.V.
PDB entry 7k2y: Crystal structure of CTX-M-14 E166A/K234R Beta-lactamase in complex with hydrolyzed ampicillin
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2020-09-09
Authors: Lu, S., Palzkill, T., Sankaran, B., Hu, L., Soeung, V., Prasad, B.V.V.
PDB entry 7k2z: Crystal structure of Pisum sativum KAI2 Apo form
Classification: HYDROLASE
Source organism: Pisum sativum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2020-09-09
Authors: Guercio, A.M., Shabek, N.
PDB entry 7k30: Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with dU at the active site
Classification: HYDROLASE/DNA
Source organism: Pyrococcus furiosus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2020-09-10
Authors: Shi, K., Moeller, N.M., Banerjee, S., Yin, L., Orellana, K., Aihara, H.
PDB entry 7k31: Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with dI at the active site
Classification: HYDROLASE/DNA
Source organism: Pyrococcus furiosus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2020-09-10
Authors: Shi, K., Moeller, N.M., Banerjee, S., Yin, L., Orellana, K., Aihara, H.
PDB entry 7k32: Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with an abasic lesion at the active site
Classification: HYDROLASE/DNA
Source organism: Pyrococcus furiosus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2020-09-10
Authors: Shi, K., Moeller, N.M., Banerjee, S., Yin, L., Orellana, K., Aihara, H.
PDB entry 7k33: Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with an abasic lesion at the active site
Classification: HYDROLASE/DNA
Source organism: Pyrococcus furiosus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2020-09-10
Authors: Shi, K., Moeller, N.M., Banerjee, S., Yin, L., Orellana, K., Aihara, H.
PDB entry 7k34: Crystal structure of L-threonine transaldolase from Pseudomonas fluorescens in internal aldimine state
Classification: BIOSYNTHETIC PROTEIN, SYNTHASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2020-09-10
Authors: Kumar, P., Bingman, C.A., Buller, A.R.
PDB entry 7k35: EQADH-NADH-4-METHYLBENZYL ALCOHOL, p21
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-09-10
Authors: Plapp, B.V., Ramaswamy, S.
PDB entry 7k36: Cryo-EM structure of STRIPAK complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-09-10
Authors: Jeong, B.-C., Bai, X.C.
PDB entry 7k37: Structure of full-length influenza HA with a head-binding antibody at pH 7.8
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-09-10
Authors: Gui, M., Xiang, Y., Gao, J.
PDB entry 7k38: Crystal structure of Pisum sativum KAI2 in complex with GR24-ent5DS product
Classification: HYDROLASE
Source organism: Pisum sativum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-09-10
Authors: Guercio, A.M., Shabek, N.
PDB entry 7k39: Structure of full-length influenza HA with a head-binding antibody at pH 5.2, conformation A, neutral pH-like
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-09-10
Authors: Gui, M., Gao, J., Xiang, Y.
PDB entry 7k3a: Structure of full-length influenza HA with a head-binding antibody at pH 5.2, conformation B, fusion peptide release
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-09-10
Authors: Gui, M., Gao, J., Xiang, Y.
PDB entry 7k3b: Structure of full-length influenza HA with a head-binding antibody at pH 5.2, conformation C, central helices splay
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-09-10
Authors: Gui, M., Gao, J., Xiang, Y.
PDB entry 7k3c: SGMGGIT segment 58-64 from Keratin-8
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2020-09-11
Authors: Murray, K.A., Sawaya, M.R., Eisenberg, D.S.
PDB entry 7k3d: The structure of NTMT1 in complex with compound DC1-13
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2020-09-11
Authors: Chen, D., Huang, R., Noinaj, N.
PDB entry 7k3g: SARS-CoV-2 Envelope Protein Transmembrane Domain: Pentameric Structure Determined by Solid-State NMR
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: SOLID-STATE NMR
Deposited: 2020-09-11
Authors: Mandala, V.S., Hong, M., McKay, M.J., Shcherbakov, A.S., Dregni, A.J.
PDB entry 7k3h: Crystal structure of deep network hallucinated protein 0217
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-09-11
Authors: Pellock, S.J., Anishchenko, I., Chidyausiku, T.M., Bera, A.K., DiMaio, F., Baker, D.
PDB entry 7k3i: Cellular retinol-binding protein 2 (CRBP2) in complex with 2-lauroylglycerol
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-09-11
Authors: Adams, C., Silvaroli, J.A., Banarjee, S., Golczak, M.
PDB entry 7k3j: Crystal structure of dLC8 in complex with Panoramix TQT+TQ peptide
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-09-11
Authors: Wang, J., Patel, D.J.
PDB entry 7k3k: Crystal structure of dLC8 in complex with Panoramix TQT peptide
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.415 Å
Deposited: 2020-09-11
Authors: Wang, J., Patel, D.J.
PDB entry 7k3l: Crystal structure of dLC8 in complex with Panoramix TQ peptide
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2020-09-11
Authors: Wang, J., Patel, D.J.
PDB entry 7k3m: Crystal Structure of the Beta Lactamase Class D from Chitinophaga pinensis by Serial Crystallography
Classification: HYDROLASE
Source organism: Chitinophaga pinensis DSM 2588
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-11
Authors: Kim, Y., Sherrell, D.A., Johnson, J., Lavens, A., Maltseva, N., Endres, M., Babnigg, G., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7k3n: Crystal Structure of NSP1 from SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-09-11
Authors: Semper, C., Watanabe, N., Chang, C., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7k3o: Crystal structure of the unliganded second bromodomain (BD2) of human TAF1
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-09-12
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7k3p: The structure of the UDP-Glc/GlcNAc 4-epimerase from the human pathogen Campylobacter jejuni
Classification: SUGAR BINDING PROTEIN
Source organism: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2020-09-12
Authors: Yun, H.G., Clemons Jr., W.M.
PDB entry 7k3q: An ultra-potent human neutralizing antibody locks the SARS-CoV-2 spike in the closed conformation
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2020-09-12
Authors: Snell, G., Czudnochowski, N., Ng, C.
PDB entry 7k3r: Cryo-EM structure of AIM2-PYD filament
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-09-12
Authors: Zheng, W., Matyszewski, M., Sohn, J., Egelman, E.H.
PDB entry 7k3s: Solution NMR Structure of the Coiled-coil BRCA1-PALB2 Heterodimer
Classification: ONCOPROTEIN
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2020-09-13
Authors: Daigham, N.S., Liu, G., Bunting, S.F., Montelione, G.T.
PDB entry 7k3t: Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) at 1.2 A Resolution and a Possible Capture of Zinc Binding Intermediate
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-09-13
Authors: Andi, B., Kumaran, D., Kreitler, D.F., Soares, A.S., Shi, W., Jakoncic, J., Fuchs, M.R., Keereetaweep, J., Shanklin, J., McSweeney, S.
PDB entry 7k3u: X-ray crystallographic structure model of Lactococcus lactis prolidase mutant R293S
Classification: HYDROLASE
Source organism: Lactococcus lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-09-13
Authors: Xu, S., Grochulski, P., Tanaka, T.
PDB entry 7k3v: Apoferritin structure at 1.34 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with K3 detector
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.34 Å
Deposited: 2020-09-14
Authors: Zhang, K., Pintilie, G., Li, S., Schmid, M., Chiu, W.
PDB entry 7k3w: Apoferritin structure at 1.36 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with Falcon4 detector
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.36 Å
Deposited: 2020-09-14
Authors: Zhang, K., Pintilie, G., Li, S., Schmid, M., Chiu, W.
PDB entry 7k3x: SGMGCIT segment 58-64 from Keratin-8 with G62C mutation
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.705 Å
Deposited: 2020-09-14
Authors: Murray, K.A., Sawaya, M.R., Eisenberg, D.S.
PDB entry 7k3y: GGYAGAS segment 52-58 from Keratin-8
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2020-09-14
Authors: Murray, K.A., Sawaya, M.R., Eisenberg, D.S.
PDB entry 7k3z: P. falciparum Cpn60 D474A mutant bound to ATP
Classification: CHAPERONE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.69 Å
Deposited: 2020-09-14
Authors: Tolia, N.H., Shi, D., Nguyen, B.
PDB entry 7k40: Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) in Complex with Covalent Inhibitor Boceprevir at 1.35 A Resolution
Classification: VIRAL PROTEIN, HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2020-09-14
Authors: Kumaran, D., Andi, B., Kreitler, D.F., Soares, A.S., Shi, W., Jakoncic, J., Fuchs, M.R., Keereetaweep, J., Shanklin, J., McSweeney, S.
PDB entry 7k41: Bacterial O-GlcNAcase (OGA) with compound
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-09-14
Authors: Lane, W., Tjhen, R., Snell, G., Sang, B.
PDB entry 7k42: Crystal structure of the second bromodomain (BD2) of human TAF1 bound to dioxane
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-09-14
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7k43: SARS-CoV-2 spike in complex with the S2M11 neutralizing antibody Fab fragment
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2020-09-14
Authors: Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k44: SGBP-B from a complex xyloglucan utilization locus in Bacteroides uniformis
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides uniformis (strain ATCC 8492 / DSM 6597 / CIP 103695 / JCM 5828 / NCTC 13054 / VPI 0061)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-09-14
Authors: Brumer, H., Van Petegem, F., Grondin, J.M.
PDB entry 7k45: SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment (local refinement of the RBD and Fab variable domains)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-09-14
Authors: Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k46: Crystal Structure of a putative aspartate carbamoyltransferase Leishmania major Friedlin
Classification: TRANSFERASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-09-14
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k47: Crystal Structure of Glucosamine-1-phosphate N-acetyltransferase from Stenotrophomonas maltophilia K279a
Classification: TRANSFERASE
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-09-14
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k48: Structure of NavAb/Nav1.7-VS2A chimera trapped in the resting state by tarantula toxin m3-Huwentoxin-IV
Classification: MEMBRANE PROTEIN
Source organism: Arcobacter butzleri (strain RM4018); Escherichia coli (strain K12); Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-09-15
Authors: Wisedchaisri, G., Tonggu, L., Gamal El-Din, T.M., McCord, E., Zheng, N., Catterall, W.A.
PDB entry 7k4a: Cryo-EM structure of human TRPV6 in the open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2020-09-15
Authors: Neuberger, A., Nadezhdin, K.D., Singh, A.K., Sobolevsky, A.I.
PDB entry 7k4b: Cryo-EM structure of human TRPV6 in complex with (4- phenylcyclohexyl)piperazine inhibitor cis-22a
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-09-15
Authors: Neuberger, A., Nadezhdin, K.D., Singh, A.K., Sobolevsky, A.I.
PDB entry 7k4c: Cryo-EM structure of human TRPV6 in complex with (4- phenylcyclohexyl)piperazine inhibitor Br-cis-22a
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2020-09-15
Authors: Neuberger, A., Nadezhdin, K.D., Singh, A.K., Sobolevsky, A.I.
PDB entry 7k4d: Cryo-EM structure of human TRPV6 in complex with (4- phenylcyclohexyl)piperazine inhibitor 3OG
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2020-09-15
Authors: Neuberger, A., Nadezhdin, K.D., Singh, A.K., Sobolevsky, A.I.
PDB entry 7k4e: Cryo-EM structure of human TRPV6 in complex with (4- phenylcyclohexyl)piperazine inhibitor 30
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.34 Å
Deposited: 2020-09-15
Authors: Neuberger, A., Nadezhdin, K.D., Singh, A.K., Sobolevsky, A.I.
PDB entry 7k4f: Cryo-EM structure of human TRPV6 in complex with (4- phenylcyclohexyl)piperazine inhibitor 31
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2020-09-15
Authors: Neuberger, A., Nadezhdin, K.D., Singh, A.K., Sobolevsky, A.I.
PDB entry 7k4g: Human Arginase 1 in complex with compound 01.
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-15
Authors: Palte, R.L.
PDB entry 7k4h: Human Arginase 1 in complex with compound 04.
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-09-15
Authors: Palte, R.L.
PDB entry 7k4i: Human Arginase 1 in complex with compound 06.
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-09-15
Authors: Palte, R.L.
PDB entry 7k4j: Human Arginase 1 in complex with compound 51.
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2020-09-15
Authors: Palte, R.L.
PDB entry 7k4k: Human Arginase 1 in complex with compound 52.
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2020-09-15
Authors: Palte, R.L.
PDB entry 7k4l: DENV1 SLA bottom stem RNA (DenvBS)
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2020-09-15
Authors: Sun, Y.T., Varani, G., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k4m: Crystal structure of MetAP2 Modified Hemoglobin S
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-09-15
Authors: Musayev, F.N., Safo, M.K., Light, D.R.
PDB entry 7k4n: SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-09-15
Authors: Tortorici, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k4o: Tannin acyl hydrolase from Aspergillus niger
Classification: HYDROLASE
Source organism: Aspergillus niger
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-09-15
Authors: Ren, B.
PDB entry 7k4p: Crystal structure of Kemp Eliminase HG3
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4q: Crystal structure of Kemp Eliminase HG3 in complex with the transition state analog 6-nitrobenzotriazole
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4r: Crystal structure of Kemp Eliminase HG3 K50Q
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4s: Crystal structure of Kemp Eliminase HG3.7
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4t: Crystal structure of Kemp Eliminase HG3.17
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.999 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4u: Crystal structure of Kemp Eliminase HG3 K50Q in complex with the transition state analog 6-nitrobenzotriazole
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4v: Crystal structure of Kemp Eliminase HG3.17
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4w: Crystal structure of Kemp Eliminase HG3.17 in the inactive state
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4x: Crystal structure of Kemp Eliminase HG3.7 in complex with the transition state analog 6-nitrobenzotriazole
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4y: Crystal structure of Kemp Eliminase HG3.17 at 343 K
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k4z: Crystal structure of Kemp Eliminase HG3.17 in complex with the transition state analog 6-nitrobenzotriazole
Classification: HYDROLASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2020-09-16
Authors: Padua, R.A.P., Otten, R., Bunzel, A., Nguyen, V., Pitsawong, W., Patterson, M., Sui, S., Perry, S.L., Cohen, A.E., Hilvert, D., Kern, D.
PDB entry 7k50: Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-09-16
Authors: Demo, G., Loveland, A.B., Svidritskiy, E., Gamper, H.B., Hou, Y.M., Korostelev, A.A.
PDB entry 7k51: Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-09-16
Authors: Demo, G., Loveland, A.B., Svidritskiy, E., Gamper, H.B., Hou, Y.M., Korostelev, A.A.
PDB entry 7k52: Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-09-16
Authors: Demo, G., Loveland, A.B., Svidritskiy, E., Gamper, H.B., Hou, Y.M., Korostelev, A.A.
PDB entry 7k53: Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-09-16
Authors: Demo, G., Loveland, A.B., Svidritskiy, E., Gamper, H.B., Hou, Y.M., Korostelev, A.A.
PDB entry 7k54: Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli (strain K12); Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-09-16
Authors: Demo, G., Loveland, A.B., Svidritskiy, E., Gamper, H.B., Hou, Y.M., Korostelev, A.A.
PDB entry 7k55: Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12); Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-09-16
Authors: Demo, G., Loveland, A.B., Svidritskiy, E., Gamper, H.B., Hou, Y.M., Korostelev, A.A.
PDB entry 7k56: Structure of VCP dodecamer purified from H1299 cells
Classification: CYTOSOLIC PROTEIN, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-09-16
Authors: Yu, G., Bai, Y., Li, K., Jiang, W., Zhang, Z.Y.
PDB entry 7k57: Structure of apo VCP dodecamer generated from bacterially recombinant VCP/p97
Classification: CYTOSOLIC PROTEIN, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-09-16
Authors: Yu, G., Bai, Y., Li, K., Jiang, W., Zhang, Z.Y.
PDB entry 7k58: Structure of outer-arm dyneins bound to microtubule with microtubule binding state 1(MTBS-1)
Classification: STRUCTURAL PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-09-16
Authors: Qinhui, R., Kai, Z.
PDB entry 7k59: Structure of apo VCP hexamer generated from bacterially recombinant VCP/p97
Classification: CYTOSOLIC PROTEIN, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-09-16
Authors: Yu, G., Bai, Y., Li, K., Jiang, W., Zhang, Z.Y.
PDB entry 7k5a: The external aldimine form of Salmonella typhimurium Tryptophan Synthase mutant beta-Q114A in complex with cesium ion at the metal coordination site.
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-09-16
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7k5b: Structure of outer-arm dynein bound to microtubule doublet in microtubule binding state 2 (MTBS-2)
Classification: MOTOR PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2020-09-16
Authors: Rao, Q., Zhang, K.
PDB entry 7k5c: Structure of T7 DNA ejectosome periplasmic tunnel
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-09-16
Authors: Swanson, N., Cingolani, G., Pumroy, R.
PDB entry 7k5d: Ebola virus VP40 octameric ring generated by a DNA oligonucleotide
Classification: VIRAL PROTEIN
Source organism: Zaire ebolavirus (strain Mayinga-76); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2020-09-16
Authors: Landeras-Bueno, S., Wasserman, H., Salie, Z.L., Saphire, E.O.
PDB entry 7k5e: 1.75 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor JAG-5-7
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-09-16
Authors: Lovell, S., Battaile, K.P., Soldano, A., Punchi-Hewage, A., Meraz, K., Annor-Gyamfi, J.K., Yao, H., Bunce, R.A., Rivera, M.
PDB entry 7k5f: 1.90 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor KM-5-50
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-09-16
Authors: Lovell, S., Battaile, K.P., Soldano, A., Punchi-Hewage, A., Meraz, K., Annor-Gyamfi, J.K., Yao, H., Bunce, R.A., Rivera, M.
PDB entry 7k5g: 1.95 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor KM-5-28
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-09-16
Authors: Lovell, S., Battaile, K.P., Soldano, A., Punchi-Hewage, A., Meraz, K., Annor-Gyamfi, J.K., Yao, H., Bunce, R.A., Rivera, M.
PDB entry 7k5h: 1.90 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor KM-5-66
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-09-16
Authors: Lovell, S., Battaile, K.P., Soldano, A., Punchi-Hewage, A., Meraz, K., Annor-Gyamfi, J.K., Yao, H., Bunce, R.A., Rivera, M.
PDB entry 7k5i: SARS-COV-2 nsp1 in complex with human 40S ribosome
Classification: RIBOSOME/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-09-16
Authors: Wang, L., Shi, M., Wu, H.
PDB entry 7k5j: Structure of an E1-E2-ubiquitin thioester mimetic
Classification: SIGNALING PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Triticum aestivum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2020-09-16
Authors: Yuan, L., Lv, Z., Olsen, S.K.
PDB entry 7k5k: Plasmodium vivax M17 leucyl aminopeptidase Pv-M17
Classification: HYDROLASE
Source organism: Plasmodium vivax
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2020-09-17
Authors: Malcolm, T.R., McGowan, S., Belousoff, M.J.
PDB entry 7k5l: Ebola virus VP40 octameric ring generated by an RNA oligonucleotide
Classification: VIRAL PROTEIN
Source organism: Zaire ebolavirus (strain Mayinga-76); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2020-09-17
Authors: Landeras-Bueno, S., Wasserman, H., Salie, Z.L., Saphire, E.O.
PDB entry 7k5m: CRYSTAL STRUCTURE OF HBV CAPSID Y132A MUTANT IN COMPLEX WITH N-(3-chloro-4-fluorophenyl)-3-phenyl-1,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridine-5-carboxamide AT 2.65A RESOLUTION
Classification: VIRAL PROTEIN
Source organism: Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-09-17
Authors: Kuduk, S.D., Stoops, B., Alexander, R., Lam, A.M., Espiritu, C., Vogel, R., Lau, V., Klumpp, K., Flores, O.A., Hartman, G.D., Lukacs, C.M., Abendroth, J.
PDB entry 7k5n: Ligand binding domain (tandem PAS/dCache) of Aeromonas caviae diguanylate cyclase with proline bound
Classification: SIGNALING PROTEIN
Source organism: Aeromonas caviae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-17
Authors: Sweeney, E.G., Remington, S.J.
PDB entry 7k5o: Bst DNA polymerase I time-resolved structure, 1 min post dATP addition
Classification: TRANSFERASE/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2020-09-17
Authors: Chim, N., Meza, R.A., Trinh, A.M., Chaput, J.C.
PDB entry 7k5p: Bst DNA polymerase I time-resolved structure, 4 min post dATP addition
Classification: TRANSFERASE
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2020-09-17
Authors: Chim, N., Meza, R.A., Trinh, A.M., Chaput, J.C.
PDB entry 7k5q: Bst DNA polymerase I time-resolved structure, 8 min post dATP addition
Classification: TRANSFERASE/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-09-17
Authors: Chim, N., Meza, R.A., Trinh, A.M., Chaput, J.C.
PDB entry 7k5r: Bst DNA polymerase I time-resolved structure, 120 min post dATP addition
Classification: TRANSFERASE/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-09-17
Authors: Chim, N., Meza, R.A., Trinh, A.M., Chaput, J.C.
PDB entry 7k5s: Bst DNA polymerase I time-resolved structure, 4 hr post dATP and dCTP addition
Classification: TRANSFERASE/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2020-09-17
Authors: Chim, N., Meza, R.A., Trinh, A.M., Chaput, J.C.
PDB entry 7k5t: Bst DNA polymerase I time-resolved structure, 25.5 hr post dATP and dCTP addition
Classification: TRANSFERASE/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-09-17
Authors: Chim, N., Meza, R.A., Trinh, A.M., Chaput, J.C.
PDB entry 7k5u: Bst DNA polymerase I time-resolved structure, 48 hr post dATP and dCTP addition
Classification: TRANSFERASE/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-09-17
Authors: Chim, N., Meza, R.A., Trinh, A.M., Chaput, J.C.
PDB entry 7k5v: OXA-48 bound by Compound 3.1
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-09-17
Authors: Taylor, D.M., Hu, L., Prasad, B.V.V., Palzkill, T.
PDB entry 7k5w: Cryo-EM structure of heterologous protein complex loaded Thermotoga maritima encapsulin capsid
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2020-09-17
Authors: Xiong, X., Sun, C., Vago, F.S., Klose, T., Zhu, J., Jiang, W.
PDB entry 7k5x: Cryo-EM structure of a chromatosome containing human linker histone H1.0
Classification: NUCLEAR PROTEIN/DNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2020-09-17
Authors: Zhou, B.-R., Bai, Y.
PDB entry 7k5y: Cryo-EM structure of a chromatosome containing human linker histone H1.4
Classification: NUCLEAR PROTEIN/DNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2020-09-17
Authors: Zhou, B.-R., Bai, Y.
PDB entry 7k5z: Crystal Structure of Argininosuccinate synthase from Legionella pneumophila Philadelphia 1 in complex with ANPPNP and a substrate analogue Arginine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-09-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k60: Cryo-EM structure of a chromatosome containing human linker histone H1.10
Classification: NUCLEAR PROTEIN/DNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2020-09-17
Authors: Zhou, B.-R., Bai, Y.
PDB entry 7k61: Cryo-EM structure of 197bp nucleosome aided by scFv
Classification: NUCLEAR PROTEIN/DNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2020-09-17
Authors: Zhou, B.-R., Bai, Y.
PDB entry 7k62: Crystal Structure of Dihydrofolate reductase from Mycobacterium kansasii in complex with NADP and inhibitor P218
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Mycobacterium kansasii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-09-18
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k63: Cryo-EM structure of a chromatosome containing chimeric linker histone gH1.10-ncH1.4
Classification: NUCLEAR PROTEIN/DNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2020-09-18
Authors: Zhou, B.-R., Bai, Y.
PDB entry 7k64: Binary titrated soak structure of alkanesulfonate monooxygenase MsuD from Pseudomonas fluorescens with FMN
Classification: FLAVOPROTEIN
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-09-18
Authors: Liew, J.J.M., Dowling, D.P.
PDB entry 7k65: Hedgehog receptor Patched (PTCH1) in complex with conformation selective nanobody TI23
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-09-18
Authors: Zhang, Y., Bulkley, D.P., Liang, J., Manglik, A., Cheng, Y., Beachy, P.A.
PDB entry 7k66: Structure of Blood Coagulation Factor VIII in Complex with an Anti-C1 Domain Pathogenic Antibody Inhibitor
Classification: BLOOD CLOTTING/Immune System
Source organism: Homo sapiens; Mus musculus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.92 Å
Deposited: 2020-09-18
Authors: Childers, K.C., Gish, J., Jarvis, L., Peters, S., Garrels, C., Smith, I.W., Spencer, H.T., Spiegel, P.C.
PDB entry 7k67: Structure of the PTP-like myo-inositol phosphatase from Desulfovibrio magneticus
Classification: HYDROLASE
Source organism: Desulfovibrio magneticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-09-18
Authors: Cleland, C.P., Van Herk, P.H., Mosimann, S.C.
PDB entry 7k68: Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001565
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Mycobacterium ulcerans (strain Agy99)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-09-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k69: Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001574
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Mycobacterium ulcerans (strain Agy99)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-09-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k6a: Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001575
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Mycobacterium ulcerans (strain Agy99)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-09-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7k6b: Solution Structure of the Dysferlin C2A Domain in its Calcium-free State
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-09-19
Authors: Wang, Y., Mercier, P., Santamaria, L., Shaw, G.S.