LiteFold/PDB huggingface dataset:
PDB entry 7p8a: Crystal structure of YTHDC1 with compound YLI_DC1_003
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-07-21
Authors: Bedi, R.K., Li, Y., Dolbois, A., Caflisch, A.
PDB entry 7p8b: Crystal structure of YTHDC1 with compound YLI_DC1_006
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2021-07-21
Authors: Bedi, R.K., Li, Y., Dolbois, A., Caflisch, A.
PDB entry 7p8c: Crystal structure of the Receiver domain of A. thaliana cytokinin receptor AtCRE1 in complex with K+
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-07-21
Authors: Tran, L.H., Urbanowicz, A., Jasinski, M., Jaskolski, M., Ruszkowski, M.
PDB entry 7p8d: Crystal structure of the Receiver domain of A. thaliana cytokinin receptor AtCRE1 in complex with Mg2+
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-07-21
Authors: Tran, L.H., Urbanowicz, A., Jasinski, M., Jaskolski, M., Ruszkowski, M.
PDB entry 7p8e: Crystal structure of the Receiver domain of M. truncatula cytokinin receptor MtCRE1
Classification: SIGNALING PROTEIN
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-07-21
Authors: Tran, L.H., Urbanowicz, A., Jasinski, M., Jaskolski, M., Ruszkowski, M.
PDB entry 7p8f: Crystal structure of YTHDC1 with compound YLI_DC1_008
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-07-21
Authors: Bedi, R.K., Li, Y., Caflisch, A.
PDB entry 7p8g: Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 5.5 - apo form
Classification: TRANSFERASE
Source organism: Mycolicibacterium hassiacum DSM 44199
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2021-07-21
Authors: Silva, A., Nunes-Costa, D., Barbosa Pereira, P.J., Macedo-Ribeiro, S.
PDB entry 7p8h: chicken GRIFIN bound to blood group tetrasaccharide B (type 1)
Classification: SUGAR BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2021-07-22
Authors: Ruiz, F.M., Romero, A.
PDB entry 7p8i: Receptor-binding domain (RBD) of the spike protein of the bat coronavirus RaTG13 virus in complex with the extracellular domain of human angiotensin-converting enzyme 2 (ACE2) - Crystal form 1
Classification: CELL INVASION
Source organism: Bat coronavirus RaTG13; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.5 Å
Deposited: 2021-07-22
Authors: Scietti, L., Castelli, M., Faravelli, S., Clementi, N., Mancini, N., Forneris, F.
PDB entry 7p8j: Receptor-binding domain (RBD) of the spike protein of the bat coronavirus RaTG13 virus in complex with the extracellular domain of human angiotensin-converting enzyme 2 (ACE2) - Crystal form 2
Classification: CELL INVASION
Source organism: Bat coronavirus RaTG13; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 6.585 Å
Deposited: 2021-07-22
Authors: Scietti, L., Castelli, M., Faravelli, S., Clementi, N., Mancini, N., Forneris, F.
PDB entry 7p8k: Crystal structure of in planta processed AvrRps4 in complex with the WRKY domain of RRS1
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana; Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2021-07-23
Authors: Mukhi, N., Brown, H., Gorenkin, D., Ding, P., Bentham, A.R., Jones, J.D.G., Banfield, M.J.
PDB entry 7p8l: Crystal structure of Pyrococcus abyssi 8-oxoguanine DNA glycosylase (PabAGOG) in complex with dsDNA containing cytosine opposite to 8-oxoG
Classification: HYDROLASE
Source organism: Pyrococcus abyssi (strain GE5 / Orsay); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-07-23
Authors: Coste, F., Flament, D., Castaing, B.
PDB entry 7p8m: Crystal structure of L147A/I351A variant of S-adenosylmethionine synthetase from Methanocaldococcus jannaschii in complex with DMNB-SAM (4,5-dimethoxy-2-nitro benzyme S-adenosyl-methionine)
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2021-07-23
Authors: Herrmann, E., Peters, A., Cornelissen, N.V., Rentmeister, A., Kuemmel, D.
PDB entry 7p8n: TmHydABC- T. maritima hydrogenase with bridge closed
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-07-23
Authors: Furlan, C., Chongdar, N., Gupta, P., Lubitz, W., Ogata, H., Blaza, J.N., Birrell, J.A.
PDB entry 7p8o: Crystal structure of D-aminoacid transaminase from Haliscomenobacter hydrossis in its intermediate form
Classification: TRANSFERASE
Source organism: Haliscomenobacter hydrossis DSM 1100
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-07-23
Authors: Matyuta, I.O., Boyko, K.M., Bakunova, A.K., Nikolaeva, A.Y., Rakitina, T.V., Bezsudnova, E.Y., Popov, V.O.
PDB entry 7p8p: Crystal structure of Fhit covalently bound to a nucleotide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2021-07-23
Authors: Herzog, D., Missun, M., Diederichs, K., Marx, A.
PDB entry 7p8q: Structure of E.coli RlmJ in complex with an RNA conjugate (GA-SAM)
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.289 Å
Deposited: 2021-07-23
Authors: Meynier, V., Catala, M., Oerum, S., Barraud, P., Tisne, C.
PDB entry 7p8r: X-ray structure of the adduct of a vanadium picolinate complex with RNase A at pH 5.1
Classification: RNA BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2021-07-23
Authors: Ferraro, G., Merlino, A.
PDB entry 7p8s: Crystal Structure of leukotoxin LukE from Staphylococcus aureus at 1.9 Angstrom resolution
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-07-23
Authors: Lambey, P., Hoh, F., Granier, S., Leyrat, C.
PDB entry 7p8t: Crystal Structure of leukotoxin LukE from Staphylococcus aureus at 1.5 Angstrom resolution
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.459 Å
Deposited: 2021-07-23
Authors: Lambey, P., Hoh, F., Granier, S., Leyrat, C.
PDB entry 7p8u: Crystal Structure of leukotoxin LukE from Staphylococcus aureus in complex with p-cresyl sulfate
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-07-23
Authors: Lambey, P., Hoh, F., Peysson, F., Granier, S., Leyrat, C.
PDB entry 7p8v: The structure of E. coli MutL bound to a 3' resected DNA end
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-07-23
Authors: Borsellini, A., Lamers, M.H.
PDB entry 7p8w: Human erythrocyte catalase cryoEM
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2021-07-23
Authors: Chen, S., Li, J., Vinothkumar, K.R., Henderson, R.
PDB entry 7p8x: Crystal Structure of leukotoxin LukE from Staphylococcus aureus in complex with a doubly sulfated CCR2 N-terminal peptide
Classification: TOXIN
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-07-23
Authors: Lambey, P., Hoh, F., Peysson, F., Granier, S., Leyrat, C.
PDB entry 7p8y: Short wilavidin apo form
Classification: UNKNOWN FUNCTION
Source organism: Gammaproteobacteria bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2021-07-23
Authors: Avraham, O., Livnah, O.
PDB entry 7p8z: Short wilavidin biotin complex
Classification: UNKNOWN FUNCTION
Source organism: Gammaproteobacteria bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2021-07-23
Authors: Avraham, O., Livnah, O.
PDB entry 7p90: Crystal structure of Paradendryphiella salina PL7A alginate lyase in complex with tetra-mannuronic acid products
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2021-07-23
Authors: Fredslund, F., Welner, D.H., Wilkens, C.
PDB entry 7p91: TmHydABC- T. maritima bifurcating hydrogenase with bridge domain closed
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-07-23
Authors: Furlan, C., Chongdar, N., Gupta, P., Lubitz, W., Ogata, H., Blaza, J.N., Birrell, J.A.
PDB entry 7p92: TmHydABC- T. maritima bifurcating hydrogenase with bridge domain up
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-07-23
Authors: Furlan, C., Chongdar, N., Gupta, P., Lubitz, W., Ogata, H., Blaza, J.N., Birrell, J.A.
PDB entry 7p93: Crystal Structure of leukotoxin LukE from Staphylococcus aureus in complex with a sulfated ACKR1 N-terminal peptide
Classification: TOXIN
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-07-23
Authors: Lambey, P., Hoh, F., Peysson, F., Granier, S., Leyrat, C.
PDB entry 7p97: Structure of 3-phospho-D-glycerate guanylyltransferase with product 3-GPPG bound
Classification: TRANSFERASE
Source organism: Mycetohabitans rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-07-26
Authors: Palm, G.J., Berndt, L., Lammers, M.
PDB entry 7p98: Cyclohex-1-ene-1-carboxyl-CoA dehydrogenase in a substrate-free state
Classification: OXIDOREDUCTASE
Source organism: Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-07-26
Authors: Ermler, U., Weidenweber, S., Boll, M.
PDB entry 7p99: Structure of human USPL1 in complex with SUMO2
Classification: HYDROLASE
Source organism: Homo sapiens; Peromyscus maniculatus bairdii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-07-26
Authors: Reverter, D., Ying, L.
PDB entry 7p9a: Structure of cyclohex-1-ene-1-carboxyl-CoA dehydrogenase complexed with cyclohex-1,5-diene-1-carboxyl-CoA
Classification: OXIDOREDUCTASE
Source organism: Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-07-26
Authors: Ermler, U., Weidenweber, S., Boll, M.
PDB entry 7p9b: Providencia stuartii Arginine decarboxylase (Adc), decamer structure
Classification: LYASE
Source organism: Providencia stuartii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2021-07-26
Authors: Jessop, M., Desfosses, A., Bacia-Verloop, M., Gutsche, I.
PDB entry 7p9c: Escherichia coli type II L-asparaginase
Classification: ANTITUMOR PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-07-27
Authors: Maggi, M., Scotti, C.
PDB entry 7p9d: Crystal structure of Chlamydomonas reinhardtii NADPH Dependent Thioredoxin Reductase 1 domain
Classification: OXIDOREDUCTASE
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-07-27
Authors: Singh, R.K., Marchetti, G.M., Hippler, M., Kuemmel, D.
PDB entry 7p9e: Chlamydomonas reinhardtii NADPH Dependent Thioredoxin Reductase 1 domain CS mutant
Classification: OXIDOREDUCTASE
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2021-07-27
Authors: Fuesser, F., Kuemmel, D.
PDB entry 7p9i: Structure of E.coli RlmJ in complex with an RNA conjugate (GAA-SAM)
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.594 Å
Deposited: 2021-07-27
Authors: Meynier, V., Catala, M., Oerum, S., Barraud, P., Tisne, C.
PDB entry 7p9j: Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 - Primer Initiation Complex
Classification: TRANSFERASE
Source organism: Marinitoga sp. 1137; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-07-27
Authors: Li, A.W.H., Doherty, A.J.
PDB entry 7p9k: BrxU, GmrSD-family Type IV restriction enzyme
Classification: DNA BINDING PROTEIN
Source organism: Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2021-07-27
Authors: Picton, D.M., Luyten, Y., Morgan, R.D., Nelson, A., Smith, D.L., Dryden, D.T.F., Hinton, J.C.D., Blower, T.R.
PDB entry 7p9l: N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine-6-phosphate
Classification: SUGAR BINDING PROTEIN
Source organism: Plesiomonas shigelloides 302-73; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-07-27
Authors: Roy, S., Isupov, M.N., Harmer, N.J., Ames, J.R.
PDB entry 7p9m: BrxU, GmrSD-family Type IV restriction enzyme
Classification: DNA BINDING PROTEIN
Source organism: Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-07-27
Authors: Picton, D.M., Luyten, Y., Morgan, R.D., Nelson, A., Smith, D.L., Dryden, D.T.F., Hinton, J.C.D., Blower, T.R.
PDB entry 7p9n: Crystal structure of CD73 in complex with AMP in the open form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-07-27
Authors: Scaletti, E.R., Strater, N.
PDB entry 7p9o: Structure of E.coli RlmJ in complex with a SAM analogue (CA)
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.095 Å
Deposited: 2021-07-27
Authors: Meynier, V., Catala, M., Oerum, S., Barraud, P., Tisne, C.
PDB entry 7p9p: N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine and AMP-PNP inhibitor
Classification: SUGAR BINDING PROTEIN
Source organism: Plesiomonas shigelloides 302-73; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2021-07-27
Authors: Roy, S., Isupov, M.N., Harmer, N.J., Ames, J.R.
PDB entry 7p9q: Crystal structure of Indole 3-Carboxylic acid decarboxylase from Arthrobacter nicotianae FI1612 in complex with co-factor prFMN.
Classification: LYASE
Source organism: Glutamicibacter nicotianae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2021-07-27
Authors: Gahloth, D., Leys, D.
PDB entry 7p9r: Crystal structure of CD73 in complex with GMP in the open form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2021-07-27
Authors: Scaletti, E.R., Strater, N.
PDB entry 7p9t: Crystal structure of CD73 in complex with dCMP in the open form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2021-07-27
Authors: Scaletti, E.R., Strater, N.
PDB entry 7p9u: Cryo EM structure of System XC- in complex with glutamate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-07-28
Authors: Parker, J.L., Deme, J.C., Lea, S.M., Newstead, S.
PDB entry 7p9v: Cryo EM structure of System XC-
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-07-28
Authors: Parker, J.L., Deme, J.C., Lea, S.M., Newstead, S.
PDB entry 7p9w: Epstein-Barr virus encoded apoptosis regulator BHRF1 in complex with Puma BH3
Classification: APOPTOSIS
Source organism: Epstein-Barr virus (strain B95-8); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.0001 Å
Deposited: 2021-07-28
Authors: Suraweera, C.D., Hinds, M.G., Kvansakul, M.
PDB entry 7p9x: Structure of cyclohex-1-ene-1-carboxyl-CoA dehydrogenase complexed with cyclohex-1-ene-1-carboxyl-CoA
Classification: OXIDOREDUCTASE
Source organism: Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-07-28
Authors: Ermler, U., Weidenweber, S., Boll, M.
PDB entry 7p9y: N-acetylglucosamine kinase from Plesiomonas shigelloides compexed with alpha-N-acetylglucosamine
Classification: SUGAR BINDING PROTEIN
Source organism: Plesiomonas shigelloides 302-73; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2021-07-28
Authors: Roy, S., Isupov, M.N., Harmer, N.J., Ames, J.R.
PDB entry 7p9z: Crystal structure of a trapped Pab-AGOG/double-standed DNA covalent intermediate (DNA containing adenine opposite to lesion)
Classification: HYDROLASE
Source organism: Pyrococcus abyssi; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2021-07-28
Authors: Coste, F., Goffinont, S., Flament, D., Castaing, B.
PDB entry 7pa0: NaK C-DI F92A mutant with Rb+ and K+
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-07-28
Authors: Minniberger, S., Plested, A.J.R.
PDB entry 7pa1: Structure of N-acetylglucosamine kinase from Plesiomonas shigelloides in complex with AMP-PNP in the absence of N-acetylglucoseamine substrate
Classification: SUGAR BINDING PROTEIN
Source organism: Plesiomonas shigelloides 302-73; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-07-28
Authors: Roy, S., Isupov, M.N., Harmer, N.J., Ames, J.R.
PDB entry 7pa2: PARK7 with inhibitor 8RK64
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2021-07-28
Authors: Kim, R.Q., Jia, Y., Sapmaz, A., Geurink, P.P.
PDB entry 7pa3: PARK7 with covalent inhibitor JYQ-88
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2021-07-28
Authors: Kim, R.Q., Jia, Y., Sapmaz, A., Geurink, P.P.
PDB entry 7pa4: Crystal structure of CD73 in complex with CMP in the open form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-07-28
Authors: Scaletti, E.R., Strater, N.
PDB entry 7pa5: Complex between the beta-lactamase CMY-2 with an inhibitory nanobody
Classification: HYDROLASE
Source organism: Camelidae; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.184 Å
Deposited: 2021-07-29
Authors: Frederic Cawez, F.C., Frederic Kerff, F.K., Moreno Galleni, M.G., Raphael Herman, R.H.
PDB entry 7pa6: JC polyomavirus VP1 in complex with scFv 27C11
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; JC polyomavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-07-29
Authors: Harprecht, C., Stroeh, L.J., Nagel, F., Freytag, J., Stehle, T.
PDB entry 7pa7: BK polyomavirus VP1 in complex with scFv 29B1
Classification: VIRAL PROTEIN
Source organism: Betapolyomavirus hominis; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-07-29
Authors: Harprecht, C., Stroeh, L.J., Freytag, J., Stehle, T.
PDB entry 7pa8: JC polyomavirus VP1 in complex with Fab 27C2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; JC polyomavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2021-07-29
Authors: Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.
PDB entry 7pa9: JC polyomavirus VP1 in complex with Fab 98D3
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; JC polyomavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2021-07-29
Authors: Stroeh, L.J., Harprecht, C., Freytag, J., Stehle, T.
PDB entry 7paa: JC polyomavirus VP1 in complex with scFv 29B1
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; JC polyomavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.102 Å
Deposited: 2021-07-29
Authors: Harprecht, C., Stroeh, L.J., Freytag, J., Stehle, T.
PDB entry 7pab: Varicella zoster Orf24-Orf27 nuclear egress complex
Classification: VIRAL PROTEIN
Source organism: Human herpesvirus 3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-07-29
Authors: Schweininger, J., Muller, Y.A.
PDB entry 7pac: The crystal structure of PDE6D in the apo state
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-07-29
Authors: Beaumont, E., Williams, D.
PDB entry 7pad: The crystal structure of DW-0254 in complex with PDE6D
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2021-07-29
Authors: Beaumont, E., Williams, D.
PDB entry 7pae: The crystal structure of Deltarasin in complex with PDE6D
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-07-29
Authors: Beaumont, E., Williams, D.
PDB entry 7paf: Streptococcus pneumoniae choline importer LicB in lipid nanodiscs
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae TIGR4; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2021-07-29
Authors: Perez, C., Baerland, N.
PDB entry 7pag: The pore conformation of lymphocyte perforin
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-07-29
Authors: Ivanova, M.E., Lukoyanova, N., Malhotra, S., Topf, M., Trapani, J.A., Voskoboinik, I., Saibil, H.R.
PDB entry 7pah: 70S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.5 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pai: 70S ribosome with P-site tRNA in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7paj: 70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.3 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pak: 70S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.3 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pal: 70S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129; Mycoplasmoides pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pam: 70S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.8 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pan: 70S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.7 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pao: 70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7paq: 70S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.9 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7par: 70S ribosome with EF-G, ap/P- and pe/E-site tRNAs in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.2 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pas: 70S ribosome with P/E-site tRNA in Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 16 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pat: free 50S in untreated Mycoplasma pneumoniae cells
Classification: RIBOSOME
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.2 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pau: free 50S in complex with ribosome recycling factor in untreated Mycoplasma pneumoniae cells
Classification: RIBOSOME
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.3 Å
Deposited: 2021-07-30
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pav: MALT1 in complex with compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2021-07-30
Authors: Kack, H., Oster, L.
PDB entry 7paw: MALT1 in complex with compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2021-07-30
Authors: Kack, H., Oster, L.
PDB entry 7pax: Structure of the human heterotetrameric cis-prenyltransferase complex in complex with magnesium, FsPP and IPP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-07-30
Authors: Giladi, M., Lisnyansky Bar-El, M., Haitin, Y.
PDB entry 7pay: Structure of the human heterotetrameric cis-prenyltransferase complex in complex with magnesium and GGsPP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-07-30
Authors: Giladi, M., Lisnyansky Bar-El, M., Haitin, Y.
PDB entry 7paz: REDUCED MUTANT P80I PSEUDOAZURIN FROM A. FAECALIS
Classification: ELECTRON TRANSFER
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 1997-02-21
Authors: Adman, E.T., Libeu, C.A.P.
PDB entry 7pb0: Structure of the human heterotetrameric cis-prenyltransferase complex in complex with magnesium, GGsPP and IsPP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2021-07-30
Authors: Giladi, M., Lisnyansky Bar-El, M., Haitin, Y.
PDB entry 7pb1: Structure of the human heterotetrameric cis-prenyltransferase complex in complex with magnesium, GGPP and IsPP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2021-07-30
Authors: Giladi, M., Lisnyansky Bar-El, M., Haitin, Y.
PDB entry 7pb2: Crystal structure of JDI TCR in complex with HLA-A*11:01 bound to KRAS G12D peptide (VVVGADGVGK)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2021-07-30
Authors: Coles, C.H., Karuppiah, V., Robinson, R.A.
PDB entry 7pb3: Structural and Functional analysis of the Proline Racemase (ProR) from the Gram-positive bacterium Acetoanaerobium sticklandii
Classification: ISOMERASE
Source organism: Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIMB 10654)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.841 Å
Deposited: 2021-07-30
Authors: Najmudin, S., Pan, X.-S., McAuley, K.E., Fisher, L.M., Sanderson, M.R.
PDB entry 7pb4: Cenp-HIK 3-protein complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2021-07-30
Authors: Bellini, D., Yatskevich, S., Muir, W.K., Barford, D.
PDB entry 7pb5: Crystal structure of CD73 in complex with UMP in the open form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2021-07-30
Authors: Scaletti, E.R., Strater, N.
PDB entry 7pb6: Structure of LPMO domain of colonization factor GbpA from Vibrio cholerae in the presence of potassium
Classification: CELL ADHESION
Source organism: Vibrio cholerae O1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-07-31
Authors: Bjerregaard-Andersen, K., Krengel, U.
PDB entry 7pb7: Structure of LPMO domain of colonization factor GbpA from Vibrio cholerae in the presence of calcium
Classification: CELL ADHESION
Source organism: Vibrio cholerae O1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-07-31
Authors: Bjerregaard-Andersen, K., Krengel, U.
PDB entry 7pb8: Crystal structure of the CENP-OPQUR complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.68 Å
Deposited: 2021-07-31
Authors: Bellini, D., Yatskevich, S., Muir, K.W., Barford, D.
PDB entry 7pb9: Crystal structure of tandem WH domains of Vps25 from Odinarchaeota
Classification: MEMBRANE PROTEIN
Source organism: Odinarchaeota archaeon (strain LCB_4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-01
Authors: Salzer, R., Bellini, D., Papatziamou, D., Robinson, N.P., Lowe, J.
PDB entry 7pba: Crystal structure of CD73 in complex with IMP in the open form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2021-08-01
Authors: Scaletti, E.R., Strater, N.
PDB entry 7pbb: Crystal structure of CD73 in complex with caffeine in the open form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2021-08-01
Authors: Scaletti, E.R., Strater, N.
PDB entry 7pbc: Crystal structure of engineered TCR (796) complexed to HLA-A*02:01 presenting MAGE-A10 9-mer peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2021-08-02
Authors: Simister, P.C., Border, E.C., Vieira, J.F., Pumphrey, N.J.
PDB entry 7pbd: a1b3 GABA-A receptor + GABA
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2021-08-02
Authors: Miller, P.S., Kasaragod, V.B.
PDB entry 7pbe: Emergence of immune escape at dominant SARS-CoV-2 killer T-cell epitope
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-08-02
Authors: Rizkallah, P.J., Sewell, A.K., Wall, A., Fuller, A.
PDB entry 7pbf: Crystal structure of Paradendryphiella salina PL7A alginate lyase in complex with di-mannuronic acid
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2021-08-02
Authors: Fredslund, F., Welner, D.H., Wilkens, C.
PDB entry 7pbg: 4-ethylphenol oxidase from Gulosibacter chungangensis: native structure
Classification: OXIDOREDUCTASE
Source organism: Gulosibacter chungangensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-08-02
Authors: Alvigini, L., Mattevi, A.
PDB entry 7pbh: Structural characterization of Thorarchaeota profilin indicates a eukaryotic-like fold but with an extended N-terminus
Classification: PROTEIN BINDING
Source organism: Candidatus Thorarchaeota
Experimental method: SOLUTION NMR
Deposited: 2021-08-02
Authors: Celestine, C.
PDB entry 7pbi: 4-ethylphenol oxidase from Gulosibacter chungangensis: isoeugenol complex
Classification: OXIDOREDUCTASE
Source organism: Gulosibacter chungangensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-08-02
Authors: Alvigini, L., Mattevi, A.
PDB entry 7pbj: Cryo-EM structure of the GroEL-GroES complex with ADP bound to both rings (""wide"" conformation).
Classification: CHAPERONE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-08-02
Authors: Pichkur, E.B., Stanishneva-Konovalova, T.B.
PDB entry 7pbk: Vibriophage phiVC8 family A DNA polymerase (DpoZ), two conformations: thumb-exo open and thumb-exo closed
Classification: VIRAL PROTEIN
Source organism: Vibrio phage phiVC8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-08-02
Authors: Czernecki, D., Hu, H., Romoli, F., Delarue, M.
PDB entry 7pbl: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t2 dataset]
Classification: HYDROLASE
Source organism: Salmonella typhimurium; Streptococcus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-02
Authors: Fahrenkamp, D., Goessweiner-Mohr, N., Wald, J., Marlovits, T.C.
PDB entry 7pbm: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s2 [t2 dataset]
Classification: HYDROLASE
Source organism: Salmonella typhimurium; Streptococcus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-02
Authors: Fahrenkamp, D., Goessweiner-Mohr, N., Wald, J., Marlovits, T.C.
PDB entry 7pbn: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s3 [t2 dataset]
Classification: HYDROLASE
Source organism: Salmonella typhimurium; Streptococcus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-02
Authors: Fahrenkamp, D., Goessweiner-Mohr, N., Wald, J., Marlovits, T.C.
PDB entry 7pbo: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s4 [t2 dataset]
Classification: HYDROLASE
Source organism: Salmonella typhimurium; Streptococcus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-08-02
Authors: Fahrenkamp, D., Goessweiner-Mohr, N., Wald, J., Marlovits, T.C.
PDB entry 7pbp: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s5 [t2 dataset]
Classification: HYDROLASE
Source organism: Salmonella typhimurium; Streptococcus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-02
Authors: Fahrenkamp, D., Goessweiner-Mohr, N., Wald, J., Marlovits, T.C.
PDB entry 7pbq: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t2 dataset]
Classification: HYDROLASE
Source organism: Salmonella typhimurium; Streptococcus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-02
Authors: Goessweiner-Mohr, N., Fahrenkamp, D., Wald, J., Marlovits, T.C.
PDB entry 7pbr: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0-A [t2 dataset]
Classification: HYDROLASE
Source organism: Streptococcus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-02
Authors: Goessweiner-Mohr, N., Fahrenkamp, D., Wald, J., Marlovits, T.C.
PDB entry 7pbs: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s0+A [t1 dataset]
Classification: HYDROLASE
Source organism: Salmonella typhimurium; Streptococcus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-02
Authors: Goessweiner-Mohr, N., Fahrenkamp, D., Wald, J., Marlovits, T.C.
PDB entry 7pbt: RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t1 dataset]
Classification: HYDROLASE
Source organism: Salmonella typhimurium; Streptococcus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-02
Authors: Wald, J., Fahrenkamp, D., Goessweiner-Mohr, N., Marlovits, T.C.
PDB entry 7pbu: RuvAB branch migration motor complexed to the Holliday junction - RuvA-HJ core [t2 dataset]
Classification: HYDROLASE
Source organism: Salmonella typhimurium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-02
Authors: Goessweiner-Mohr, N., Fahrenkamp, D., Wald, J., Marlovits, T.C.
PDB entry 7pbw: Cryo-EM structure of light harvesting complex 2 from Rba. sphaeroides.
Classification: PHOTOSYNTHESIS
Source organism: Cereibacter sphaeroides 2.4.1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2021-08-02
Authors: Qian, P., Swainsbury, D.J.K., Croll, T.I., Castro-Hartmann, P., Sader, K., Divitini, G., Hunter, C.N.
PDB entry 7pbx: Cryo-EM structure of the GroEL-GroES complex with ADP bound to both rings (""tight"" conformation).
Classification: CHAPERONE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2021-08-02
Authors: Pichkur, E.B., Stanishneva-Konovalova, T.B.
PDB entry 7pby: Crystal structure of CD73 in complex with 4-nitrocatechol in the open form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2021-08-02
Authors: Scaletti, E.R., Strater, N.
PDB entry 7pbz: a1b3 GABA-A receptor + GABA + Zn2+
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2021-08-03
Authors: Miller, P.S., Kasaragod, V.B.
PDB entry 7pc0: GABA-A receptor bound by a-Cobratoxin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Naja kaouthia
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-03
Authors: Kasaragod, V.B., Miller, P.S.
PDB entry 7pc1: DNA binding domain of partition protein StbA of plasmid R388
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-03
Authors: Guynet, C., Moncalian, G.
PDB entry 7pc2: HIV-1 Env (BG505 SOSIP.664) in complex with the IgA bNAb 7-269 and the antibody 3BNC117.
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-08-03
Authors: Fernandez, I., Bontems, F., Pehau-Arnaudet, G., Rey, F.
PDB entry 7pc3: The second PDZ domain of DLG1 complexed with the PDZ-binding motif of HTLV1-TAX1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-08-03
Authors: Cousido-Siah, A., Trave, G., Gogl, G.
PDB entry 7pc4: The PDZ domain of SNTB1 complexed with the PDZ-binding motif of HTLV1-TAX1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-08-03
Authors: Cousido-Siah, A., Trave, G., Gogl, G.
PDB entry 7pc5: The third PDZ domain of PDZD7 complexed with the PDZ-binding motif of EXOC4
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-08-03
Authors: Cousido-Siah, A., Trave, G., Gogl, G.
PDB entry 7pc6: DNA-binding domain of a p53 homolog from the hydrothermal vent annelid Alvinella pompejana
Classification: TRANSCRIPTION
Source organism: Alvinella pompejana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-08-03
Authors: Balourdas, D.-I., Knapp, S., Soussi, T., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 7pc7: The PDZ domain of SNTG1 complexed with the acetylated PDZ-binding motif of PTEN
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-03
Authors: Cousido-Siah, A., Trave, G., Gogl, G.
PDB entry 7pc8: The PDZ domain of SNTG1 complexed with the phosphomimetic mutant PDZ-binding motif of RSK1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-03
Authors: Cousido-Siah, A., Trave, G., Gogl, G.
PDB entry 7pc9: The PDZ domain of SYNJ2BP complexed with the PDZ-binding motif of HTLV1-TAX1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-08-03
Authors: Cousido-Siah, A., Trave, G., Gogl, G.
PDB entry 7pca: Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2021-08-03
Authors: Fritz-Wolf, K., Heimsch, K.C., Schuh, A.K., Becker, K.
PDB entry 7pcb: The PDZ domain of SNX27 fused with ANXA2
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-08-03
Authors: Cousido-Siah, A., Trave, G., Gogl, G.
PDB entry 7pcc: BurG in complex with Mg2+ and NAD+ (holo): Biosynthesis of cyclopropanol rings in bacterial toxins
Classification: LYASE
Source organism: Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-03
Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C.
PDB entry 7pcd: HER2 IN COMPLEX WITH A COVALENT INHIBITOR
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2021-08-03
Authors: Bader, G.
PDB entry 7pce: BurG (apo): Biosynthesis of cyclopropanol rings in bacterial toxins
Classification: LYASE
Source organism: Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-08-03
Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C.
PDB entry 7pcf: Human methemoglobin bound to Staphylococcus aureus hemophore IsdB
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus MW2
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.82 Å
Deposited: 2021-08-03
Authors: De Bei, O., Gianquinto, E., Chirgadze, D.Y., Hardwick, S.W., Spyrakis, F., Luisi, B.F., Campanini, B.
PDB entry 7pcg: BurG (holo) in complex with cyclopropane-1,1-dicarboxylate (7): Biosynthesis of cyclopropanol rings in bacterial toxins
Classification: LYASE
Source organism: Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-03
Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C.
PDB entry 7pch: Human carboxyhemoglobin bound to Staphylococcus aureus hemophore IsdB - 1:2 complex
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus MW2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2021-08-03
Authors: De Bei, O., Gianquinto, E., Chirgadze, D.Y., Hardwick, S.W., Spyrakis, F., Luisi, B.F., Campanini, B.
PDB entry 7pci: BurG (holo) in complex with hydroxypyruvate-enol (8): Biosynthesis of cyclopropanol rings in bacterial toxins
Classification: LYASE
Source organism: Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-03
Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C.
PDB entry 7pcj: X-ray structure of CypA-C52AK125C/CsA/aromatic foldamer complex
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens; Tolypocladium inflatum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2021-08-03
Authors: Vallade, M., Langlois d'Estaintot, B., Fischer, L., Buratto, J., Savko, M., Huc, I.
PDB entry 7pck: CRYSTAL STRUCTURE OF WILD TYPE HUMAN PROCATHEPSIN K
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 1998-10-21
Authors: Sivaraman, J., Lalumiere, M., Menard, R., Cygler, M.
PDB entry 7pcl: BurG (holo) in complex with 2-hydroxy-2-(hydroxy(isopropyl)amino)acetate (11): Biosynthesis of cyclopropanolrings in bacterial toxins
Classification: LYASE
Source organism: Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-08-03
Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C.
PDB entry 7pcm: BurG (holo) in complex with (Z)-2,3-dihydroxy-6-methyl-hept-2-enoate (13): Biosynthesis of cyclopropanol rings in bacterial toxins
Classification: LYASE
Source organism: Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-08-03
Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C.
PDB entry 7pcn: BurG (holo) in complex with gonyenediol (14), trigonic acid (6) and DMS: Biosynthesis of cyclopropanol rings in bacterial toxins
Classification: LYASE
Source organism: Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-08-03
Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C.
PDB entry 7pco: BurG E232Q mutant (holo) in complex with 2R,3R-2,3-dihydroxy-6-methyl-heptanoate (12): Biosynthesis of cyclopropanol rings in bacterial toxins
Classification: LYASE
Source organism: Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-08-03
Authors: Trottmann, F., Ishida, K., Ishida, M., Kries, H., Groll, M., Hertweck, C.
PDB entry 7pcp: Crystal structure of CD73 in complex with 5-iodouracil in the open form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.377 Å
Deposited: 2021-08-03
Authors: Scaletti, E.R., Strater, N.