LiteFold/PDB huggingface dataset:
PDB entry 9o57: Crystal structure of Thymidylate kinase (Tmk) from Klebsiella aerogenes.
Classification: TRANSFERASE
Source organism: Klebsiella aerogenes KCTC 2190
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2025-04-09
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9o58: Zymogen ADAM17-iRhom2 complex bound by the MEDI3622 Fab
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2025-04-09
Authors: Slone, C.E., Maciag, J.J.
PDB entry 9o5a: The KICSTOR-GATOR1 complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-09
Authors: Bayly-Jones, C., Lupton, C.J., Chang, Y.G., Ellisdon, A.M.
PDB entry 9o5b: RNase A in complex with N1-Methylpseudouridine Vanadate and decavanadates
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2025-04-09
Authors: Gutierrez, C.S., Lim, D.C., Silkenath, B., Kojasoy, V., Raines, R.T.
PDB entry 9o5d: The KICSTOR-GATOR1-SAMTOR complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2025-04-10
Authors: Bayly-Jones, C., Lupton, C.J., Chang, Y.G., Ellisdon, A.M.
PDB entry 9o5e: The dimeric KICSTOR-GATOR1 supercomplex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2025-04-10
Authors: Bayly-Jones, C., Lupton, C.J., Chang, Y.G., Ellisdon, A.M.
PDB entry 9o5f: Crystal Structure of EgtUC binding domain double mutant I243P T274G bound to L-Ergothioneine from S. pneumoniae
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae D39
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2025-04-10
Authors: Legg, K.A., Gonzalez-Gutierrez, G., Giedroc, D.P.
PDB entry 9o5g: Room-temperature joint X-ray/Neutron structure of Thermus thermophilus SHMT in complex with PLP-Gly external aldimine and 5-methyl-tetrahydrofolate (5MTHF)
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2025-04-10
Authors: Kovalevsky, A., Drago, V.N., Phillips, R.S.
PDB entry 9o5h: Crystal structure of GH30_8 xylanase from Bacillus pumilus
Classification: HYDROLASE
Source organism: Bacillus pumilus ATCC 7061
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2025-04-10
Authors: Vacilotto, M.M., Araujo, E.A., Polikarpov, I.
PDB entry 9o5i: Crystal structure of GutD2774
Classification: OXIDOREDUCTASE
Source organism: Streptomyces purpureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-04-10
Authors: Gering, H.E., Phan, H.N., Makris, T.M.
PDB entry 9o5k: Cryo-EM structure of human SWELL1-PSA heterocomplex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2025-04-10
Authors: Hagino, T., Twomey, E.C., Qiu, Z.
PDB entry 9o5m: Prenylated-FMN maturase PhdC from Mycolicibacterium fortuitum bound to prenylated flavin mononucleotide in the P1 space group
Classification: FLAVOPROTEIN
Source organism: Mycolicibacterium fortuitum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2025-04-10
Authors: Kilde, I.R., Koutmos, M.
PDB entry 9o5o: Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex bound to a small molecule activator
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-10
Authors: Cassell, S.J., Khoshouei, M., Wilhelm, W.A., Whicher, J.R.
PDB entry 9o5s: minibinder-antigen complex BXMart1-3-MART1-HLA*A02
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2025-04-10
Authors: Xiang, X., Jude, K.M., Garcia, K.C.
PDB entry 9o5t: Crystal structure of chimeric SARS-CoV-2 RBD complexed with chimeric Rhinolophus sinicus ACE2
Classification: HYDROLASE/VIRAL PROTEIN
Source organism: Rhinolophus sinicus; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2025-04-10
Authors: Hsueh, F.-C., Shi, K., Aihara, H., Li, F.
PDB entry 9o5u: CryoEM structure of Siamese algae-eater influenza-like virus (SAEILV) NA
Classification: HYDROLASE
Source organism: Siamese algae-eater influenza-like virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2025-04-10
Authors: Huang, J., Han, J., Ward, A.B.
PDB entry 9o5v: Crystal structure of chimeric BANAL-52 RBD complexed with chimeric Rhinolophus sinicus ACE2
Classification: HYDROLASE/VIRAL PROTEIN
Source organism: Rhinolophus sinicus; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2025-04-10
Authors: Hsueh, F.-C., Shi, K., Aihara, H., Li, F.
PDB entry 9o5w: CryoEM structure of Wuhan spiny eel influenza virus (WSEIV) HA
Classification: VIRAL PROTEIN
Source organism: Wuhan spiny eel influenza virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2025-04-10
Authors: Huang, J., Han, J., Ward, A.B.
PDB entry 9o60: Local refinement of 1C5H TCR bound to R-phycoerythrin (gamma chain dimer)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2025-04-10
Authors: Rashleigh, L., Venugopal, H., Rossjohn, J., Gully, B.S.
PDB entry 9o61: R-phycoerythrin
Classification: IMMUNE SYSTEM
Source organism: Pyropia tenera
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.68 Å
Deposited: 2025-04-10
Authors: Rashleigh, L., Venugopal, H., Rossjohn, J., Gully, B.S.
PDB entry 9o62: 1C5H TCR bound to R-phycoerythrin
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Pyropia tenera
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.03 Å
Deposited: 2025-04-10
Authors: Rashleigh, L., Venugopal, H., Rossjohn, J., Gully, B.S.
PDB entry 9o63: Crystal structure of PLK4 and RP1664 complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2025-04-11
Authors: Pau, V.P.T., Mao, D.Y.L., Mader, P., Maderova, Z., Zimmermann, M., Sicheri, F.
PDB entry 9o65: Cryo-EM structure of SHOC2-KRAS-PP1CA (SKP) complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-04-11
Authors: Finci, L.I., Bonsor, D.A., Simanshu, D.K.
PDB entry 9o66: Crystal Structure of Tryptophanyl-tRNA synthetase from Klebsiella aerogenes
Classification: LIGASE
Source organism: Klebsiella aerogenes KCTC 2190
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9o68: Crystal Structure of Tryptophanyl-tRNA synthetase from Klebsiella aerogenes (tryptophan bound)
Classification: LIGASE
Source organism: Klebsiella aerogenes KCTC 2190
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-04-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9o6a: CryoEM structure of EcKatG S-Trp105 at 2.22 Angstrom resolution revealing an asymmetric sulfur center in O=S-Trp
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2025-04-11
Authors: Duan, R., Li, J., Nathan, B., Yang, X., Liu, A.
PDB entry 9o6b: X-Ray structure of F240L mutant HOXB13 in complex with DNA (CAA)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-04-11
Authors: Dikbas, U.M., Wong, J.T., Chen, Y.S., Lallous, N., Van Petegem, F., Lack, N.A.
PDB entry 9o6c: X-ray structure of a bivalent diabody of 8B6, a murine monoclonal antibody specific for the human serotonin transporter
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.575 Å
Deposited: 2025-04-12
Authors: Coleman, J.A., Gouaux, E.
PDB entry 9o6d: Crystal Structure of SARS-CoV-2 Mpro S10A in complex with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-12
Authors: Zvornicanin, S.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9o6e: Crystal Structure of SARS-CoV-2 Mpro S10C in complex with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2025-04-13
Authors: Zvornicanin, S.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9o6f: Crystal Structure of SARS-CoV-2 Mpro S113A in complex with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2025-04-13
Authors: Zvornicanin, S.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9o6g: Wildtype rabbit TRPV5 in nanodics in the presence of Menthol and PI(4,5)P2
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2025-04-13
Authors: De Jesus-Perez, J.J., Moiseenkova-Bell, V.Y.
PDB entry 9o6i: TUBULIN-RB3_SLD IN COMPLEX WITH COMPOUND QW-5-70
Classification: CELL CYCLE
Source organism: Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2025-04-13
Authors: Miller, D.J.
PDB entry 9o6j: Structure of Siglec-10 in complex with 2,3-Sialyllactose
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.39 Å
Deposited: 2025-04-13
Authors: Medina, E., Ming, Q., Tran, T.H., Luca, V.C.
PDB entry 9o6k: Cryo-EM structure of AMT1-AMT7-AMTP1-AMTP2 complex
Classification: TRANSFERASE
Source organism: Tetrahymena thermophila SB210
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2025-04-13
Authors: Song, J., Shao, Z.
PDB entry 9o6n: Structure of Siglec-10
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2025-04-14
Authors: Medina, E., Ming, Q., Tran, T.H., Luca, V.C.
PDB entry 9o6o: Structure of SigLec-10 in complex with 2,6-Sialyllactose
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-04-14
Authors: Medina, E., Ming, Q., Tran, T.H., Luca, V.C.
PDB entry 9o6p: Crystal Structure of SARS-CoV-2 Mpro S113C in complex with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2025-04-14
Authors: Zvornicanin, S.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9o6q: Crystal Structure of SARS-CoV-2 Mpro L115A in complex with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2025-04-14
Authors: Zvornicanin, S.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9o6s: Structure of the human prohibitin complex in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 21 Å
Deposited: 2025-04-14
Authors: Rose, K., Herrmann, E., Hurley, J.H.
PDB entry 9o6t: Structure of the human prohibitin complex in the open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 22 Å
Deposited: 2025-04-14
Authors: Rose, K., Herrmann, E., Hurley, J.H.
PDB entry 9o6v: Recombinant AD PHF complexed with SW-MK-NBD (PHF2)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2025-04-14
Authors: Kunach, P., Diamond, M.I.
PDB entry 9o6w: Recombinant AD PHF complexed with SW-MK-NBD (Non Symmetric Binding Site)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2025-04-14
Authors: Kunach, P., Diamond, M.I.
PDB entry 9o6x: Recombinant AD THF incubated with SW-MK-NBD (Non-Symmetric Binding)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2025-04-14
Authors: Kunach, P., Diamond, M.I.
PDB entry 9o6y: Recombinant AD PHF complexed with SW-MK-NBD
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2025-04-14
Authors: Kunach, P., Diamond, M.I.
PDB entry 9o6z: Recombinant AD THF with SW-MK-NBD complexed in AD-related Binding Site
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2025-04-14
Authors: Kunach, P., Diamond, M.I.
PDB entry 9o73: Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound MW01-30-035SRM
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2025-04-14
Authors: Brunzelle, J.S., Shuvalova, L., Roy, S.M., Watterson, D.M.
PDB entry 9o74: Crystal Structure of SARS-CoV-2 Mpro L115M in complex with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2025-04-14
Authors: Zvornicanin, S.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9o76: Recombinant AD THF complexed with SW-MK-NBD (Secondary Binding Site)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2025-04-14
Authors: Kunach, P., Diamond, M.I.
PDB entry 9o79: Recombinant AD PHF incubated with DMSO (Kinked Backbone E342)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2025-04-14
Authors: Kunach, P., Diamond, M.I.
PDB entry 9o7b: Recombinant AD THF incubated with DMSO (Kinked Backbone E342)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2025-04-14
Authors: Kunach, P., Diamond, M.I.
PDB entry 9o7c: Recombinant AD THF incubated with DMSO (Flat Backbone E342)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2025-04-14
Authors: Kunach, P., Diamond, M.I.
PDB entry 9o7j: Cryo-EM of VEVAG Peptide 1
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-15
Authors: Rich-New, S.T., Wang, R., Zia, A., Tovar, J.D., Wang, F.
PDB entry 9o7k: Cryo-EM of pi-conjugated Peptide 2 (9 strands)
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-04-15
Authors: Rich-New, S.T., Wang, R., Zia, A., Tovar, J.D., Wang, F.
PDB entry 9o7l: Cryo-EM of pi-conjugated Peptide 2 (6 strands)
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-15
Authors: Rich-New, S.T., Wang, R., Zia, A., Tovar, J.D., Wang, F.
PDB entry 9o7o: CryoEM structure of M. mazei topoisomerase VI(A-E342Q)-minicircle DNA complex in asymmetric state
Classification: ISOMERASE/DNA
Source organism: Methanosarcina mazei Go1; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-04-15
Authors: Richman, D.E., Berger, J.M.
PDB entry 9o7s: Cryo-EM structure of KCa2.2/calmodulin channel in complex with NS309
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2025-04-15
Authors: Nam, Y.W., Zhang, M.
PDB entry 9o7u: Structure Determination of Pedobacter sp. KP-2 PahZ1
Classification: HYDROLASE
Source organism: Pedobacter sp. KP-2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-04-15
Authors: Wallen, J.R., Miller, J.M.
PDB entry 9o7v: Crystal Structure of the RIb:C Heterodimer of PKA
Classification: TRANSFERASE
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2025-04-15
Authors: Wu, J., Ilouz, R., Taylor, S.S.
PDB entry 9o7w: Cryo-EM structure of apo rabbit TRPM3 having 3 resting and 1 activated subunits at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o7x: Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o7y: Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (para position) at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o7z: Cryo-EM structure of apo rabbit TRPM3 having 1 resting and 3 activated subunits at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o80: Cryo-EM structure of apo rabbit TRPM3 having 3 resting and 1 activated subunits at 37 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o81: Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 37 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o82: Cryo-EM structure of apo rabbit TRPM3 having 2 resting and 2 activated subunits (para position) at 37 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.46 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o83: Cryo-EM structure of apo rabbit TRPM3 having 1 resting and 3 activated subunits at 37 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o85: Cryo-EM structure of KCa2.2_I/calmodulin channel in complex with rimtuzalcap
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2025-04-15
Authors: Nam, Y.W., Zhang, M.
PDB entry 9o86: Cryo-EM structure of CIM0216-bound rabbit TRPM3 having 3 resting and 1 activated subunits at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.11 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o87: Cryo-EM structure of CIM0216-bound rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o88: Cryo-EM structure of CIM0216-bound rabbit TRPM3 having 2 resting and 2 activated subunits (para position) at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o89: Cryo-EM structure of CIM0216-bound rabbit TRPM3 having 1 resting and 3 activated subunits at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o8b: [5,8,6,P-2] Shifted tensegrity triangle with an (arm, center, arm) distribution of (5, 8, 6) base pairs, 2 nt sticky ends, and 5' phosphates
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 7.44 Å
Deposited: 2025-04-15
Authors: Abi Rizk, J., Vecchioni, S., Horvath, A., Woloszyn, K., Ohayon, Y.P., Sha, R.
PDB entry 9o8c: Cryo-EM structure of primidone-bound rabbit TRPM3 having 3 resting and 1 activated subunits at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o8d: Cryo-EM structure of primidone-bound rabbit TRPM3 having 2 resting and 2 activated subunits (ortho position) at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o8e: amyloid fibril of recombinant full-length 2N4R tau complexed with unfractionated mouse liver RNA and seeded by Alzheimer's disease tau fibrils
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-15
Authors: Jiang, Y.X., Sawaya, M.R., Abskharon, R., Ge, P., Boyer, D.R., Eisenberg, D.S.
PDB entry 9o8f: Cryo-EM structure of primidone-bound rabbit TRPM3 having 2 resting and 2 activated subunits (para position) at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.91 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o8g: Cryo-EM structure of primidone-bound rabbit TRPM3 having 1 resting and 3 activated subunits at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2025-04-15
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9o8h: amyloid fibril of recombinant full-length 2N4R tau complexed with mouse liver 18S ribosomal RNA
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-04-15
Authors: Jiang, Y.X., Sawaya, M.R., Abskharon, R., Ge, P., Boyer, D.R., Eisenberg, D.S.
PDB entry 9o8i: [3,8,8,P-2] Shifted tensegrity triangle with an (arm, center, arm) distribution of (3, 8, 8) base pairs, 2 nt sticky ends, and 5' phosphates
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.17 Å
Deposited: 2025-04-16
Authors: Abi Rizk, J., Vecchioni, S., Horvath, A., Woloszyn, K., Ohayon, Y.P., Sha, R.
PDB entry 9o8j: Crystal structure of Phosphoglycerate mutase from Trichomonas vaginalis (sulfate bound)
Classification: ISOMERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2025-04-16
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9o8k: [6,8,5] Shifted tensegrity triangle with an (arm, center, arm) distribution of (6, 8, 5) base pairs, 2 nt sticky ends
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 6.05 Å
Deposited: 2025-04-16
Authors: Abi Rizk, J., Vecchioni, S., Horvath, A., Woloszyn, K., Ohayon, Y.P., Sha, R.
PDB entry 9o8m: Ab1983 in complex with HIV-1 Env variant WIN332
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2025-04-16
Authors: Lin, Z.J., Cui, J., Du, J., Relano-Rodriguez, I., Escolano, A., Pallesen, J.
PDB entry 9o8n: Crystal structure of 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (DapD) from Bordetella pertussis
Classification: TRANSFERASE
Source organism: Bordetella pertussis Tohama I
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2025-04-16
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9o8p: CryoEM structure of M. mazei topoisomerase VI-minicircle DNA complex
Classification: ISOMERASE/DNA
Source organism: Methanosarcina mazei Go1; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-04-16
Authors: Richman, D.E., Berger, J.M.
PDB entry 9o8q: Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Classification: Viral protein/Immune System
Source organism: Homo sapiens; Influenza A virus (A/Hong Kong/485197/2014(H3N2))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2025-04-16
Authors: Jo, G., Ward, A.B.
PDB entry 9o8r: Cryo-EM structure of NI06063_d30_103 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Classification: Viral protein/Immune System
Source organism: Homo sapiens; Influenza A virus (A/Michigan/45/2015(H1N1))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2025-04-16
Authors: Jo, G., Ward, A.B.
PDB entry 9o8s: Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Hong Kong/485197/2014 (H3N2)
Classification: Viral protein/Immune System
Source organism: Homo sapiens; Influenza A virus (A/Hong Kong/485197/2014(H3N2))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2025-04-16
Authors: Jo, G., Ward, A.B.
PDB entry 9o8t: Cryo-EM structure of NI04359_d30_240 Fab in complex with influenza virus hemagglutinin from A/Michigan/45/2015 (H1N1)
Classification: Viral protein/Immune System
Source organism: Homo sapiens; Influenza A virus (A/Michigan/45/2015(H1N1))
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2025-04-16
Authors: Jo, G., Ward, A.B.
PDB entry 9o8u: (1-methylalkyl)succinate synthase alpha-beta-gamma-delta complex with bound fumarate
Classification: LYASE
Source organism: Azoarcus sp. HxN1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-04-16
Authors: Andorfer, M.C., Drennan, C.L.
PDB entry 9o8v: Apo Form of Photoactive Yellow Protein
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2025-04-16
Authors: Fried, S.D.E., Mukherjee, S.M., Mathews, I.I., Boxer, S.G.
PDB entry 9o8w: Crystal structure of an MKP5 mutant, Y435F, in complex with an allosteric inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2025-04-16
Authors: Manjula, R., Bennett, A.M., Lolis, E.
PDB entry 9o8x: Cryo structure of human carbonic anhydrase IX mimic in complex with vorinostat (drug soak)
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2025-04-17
Authors: Gulkis, M.C., McKenna, R., Fisher, S.Z.
PDB entry 9o8y: Crystal structure of 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (DapD) from Bordetella pertussis (succinyl-CoA bound)
Classification: TRANSFERASE
Source organism: Bordetella pertussis Tohama I
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-04-17
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9o8z: CryoEM structure of M. mazei topoisomerase VI-minicircle DNA complex in partially unfolded transducer state
Classification: ISOMERASE/DNA
Source organism: Methanosarcina mazei Go1; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2025-04-17
Authors: Richman, D.E., Berger, J.M.
PDB entry 9o90: Crystal structure of UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis
Classification: TRANSFERASE
Source organism: Bordetella pertussis Tohama I
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2025-04-17
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9o91: Structure of IKZF2:CRBN:Compound 5 ternary structure
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2025-04-17
Authors: Strickland, C.O., Rice, C.T.
PDB entry 9o93: Cryo-EM structure of KCa2.2_II/calmodulin channel in complex with rimtuzalcap
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2025-04-17
Authors: Nam, Y.W., Zhang, M.
PDB entry 9o94: Transporter associated with antigen processing (TAP) EQ mutant bound to the viral protein bUL49.5 in the outward-facing kinked state
Classification: MEMBRANE PROTEIN
Source organism: bovine alphaherpesvirus 1; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-17
Authors: Lee, J., Manon, V., Chen, J.
PDB entry 9o95: Cryo-EM structure of CLC-ec1 at pH 7.5
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-17
Authors: Chien, C.-T., Chiu, W., Maduke, M.
PDB entry 9o96: Cryo-EM structure of CLC-ec1 at pH 4.0
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-17
Authors: Chien, C.-T., Chiu, W., Maduke, M.
PDB entry 9o97: Cryo-EM structure of CLC-ec1 at pH 3.0
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-17
Authors: Chien, C.-T., Chiu, W., Maduke, M.
PDB entry 9o98: Cryo-EM structure of CLC-ec1 K131A at pH 7.5
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-04-17
Authors: Chien, C.-T., Chiu, W., Maduke, M.
PDB entry 9o99: Structure of the IL-2 Surrogate Cytokine Agonist DR638
Classification: PROTEIN BINDING
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-17
Authors: Trenker, R., Vivona, S., Lupardus, P.J.
PDB entry 9o9a: Structure of the IL-18 Surrogate Cytokine Agonist DR3087
Classification: PROTEIN BINDING
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-04-17
Authors: Trenker, R., Vivona, S., Lupardus, P.J.
PDB entry 9o9b: Structure of the IL-18 Surrogate Cytokine Agonist DR3097
Classification: PROTEIN BINDING
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-04-17
Authors: Trenker, R., Vivona, S., Lupardus, P.J.
PDB entry 9o9c: Structure of the IL-18 Surrogate Cytokine Agonist DR3085
Classification: PROTEIN BINDING
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2025-04-17
Authors: Trenker, R., Vivona, S., Lupardus, P.J.
PDB entry 9o9d: Transporter associated with antigen processing (TAP) EQ mutant bound to the viral protein bUL49.5 in the outward-facing unkinked state
Classification: MEMBRANE PROTEIN
Source organism: bovine alphaherpesvirus 1; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.44 Å
Deposited: 2025-04-17
Authors: Lee, J., Manon, V., Chen, J.
PDB entry 9o9i: Crystal structure of mouse Vps29 bound to DENND4C peptide (re-refinement)
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-04-18
Authors: Chen, K.-E., Collins, B.
PDB entry 9o9m: CryoEM structure of M. mazei topoisomerase VI-minicircle DNA complex in asymmetric state
Classification: ISOMERASE/DNA
Source organism: Methanosarcina mazei Go1; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-04-18
Authors: Richman, D.E., Berger, J.M.
PDB entry 9o9n: Crystal structure of PPARgamma ligand binding domain (LBD) in complex with NCoR1 corepressor peptide and inverse agonist FX-909
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-18
Authors: Laughlin, Z.T., Dong, J., Harp, J.M., Kojetin, D.J.
PDB entry 9o9p: Structure of wild type full-length Streptococcus mutans GtfD (GTF-S)
Classification: TRANSFERASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-04-18
Authors: Schormann, N., Deivanayagam, C.
PDB entry 9o9q: Structure of full-length Streptococcus mutans GtfD active site mutant (D465S, D584S)
Classification: TRANSFERASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2025-04-18
Authors: Schormann, N., Deivanayagam, C.
PDB entry 9o9r: Crystal structure of nucleoside-diphosphate kinase Cryptosporidium parvum
Classification: TRANSFERASE
Source organism: Cryptosporidium parvum Iowa II
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2025-04-18
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9o9s: Structure of human MPC matrix-open
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2025-04-18
Authors: Qi, X., Sun, Y., Wang, Y.
PDB entry 9o9t: Structure of human MPC IMS-open
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2025-04-18
Authors: Qi, X., Sun, Y., Wang, Y.
PDB entry 9o9u: The Erlin1/2 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-04-18
Authors: Gao, J., Shao, S.
PDB entry 9o9v: NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-04-18
Authors: Borst, A.J.
PDB entry 9o9w: Crystal structure of an alpha/beta-hydrolase from Actinoplanes sp. DH11
Classification: HYDROLASE
Source organism: Actinoplanes sp. DH11
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2025-04-18
Authors: Norton-Baker, B., Storment, O., Mathews, I.I., Gauthier, N.P., McGeehan, J.E., Beckham, G.T.
PDB entry 9o9x: ytrEF nucleotide-free conformation
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-04-18
Authors: Yu, P., Krah, B.S., Orlando, M.A., Orlando, B.J.
PDB entry 9o9y: Bacillus ytrEF vanadate trapped conformation
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-04-18
Authors: Yu, P., Krah, B.S., Orlando, M.A., Orlando, B.J.
PDB entry 9o9z: The human PHB1/2 complex (closed)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2025-04-18
Authors: Gao, J., Shao, S., Sherpa, D., Kupko, N.
PDB entry 9oa0: The human PHB1/2 complex (open)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-18
Authors: Gao, J., Shao, S., Sherpa, D., Kupko, N.
PDB entry 9oa1: Ecoli DnaB helicase and Phage Lambda loader P with ADP-Mg in a 6:5 stoichiometry ratio.
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli; Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2025-04-18
Authors: Shatarupa, A., Brown, D., Olinares, P.D.B., Chase, J., Isiorho, E., Chait, B.T., Jeruzalmi, D.
PDB entry 9oa2: Ecoli DnaB helicase and Phage Lambda loader P with ADP-Mg in a 6:6 stoichiometry ratio.
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli; Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2025-04-18
Authors: Shatarupa, A., Brown, D., Olinares, P.D.B., Chase, J., Isiorho, E., Chait, B.T., Jeruzalmi, D.
PDB entry 9oa4: Human PU.1 ETS-Domain (165-270) Bound to d(5'-AATAAGCGGAAGTGGG-3') d(5'-TCCCACTTTCGCTTAT-3') with a GT mismatch
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2025-04-19
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 9oa6: Cryo-EM structure of the Zdhhc5-GOLGA7 complex
Classification: TRANSFERASE
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2025-04-19
Authors: Kahlson, M.A., Dixon, S.J., Butterwick, J.A., Wang, H.
PDB entry 9oa7: GNAT family acetyltransferase EryM SeMet
Classification: TRANSFERASE
Source organism: Saccharopolyspora erythraea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-04-19
Authors: Li, Y., Smith, J.
PDB entry 9oa8: Cryo-EM structure of KCa3.1/calmodulin channel in complex with NS309
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2025-04-19
Authors: Nam, Y.W., Zhang, M.
PDB entry 9oa9: CryoEM structure of anti-MHC-I mAb B1.23.2 Fc domains
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2025-04-20
Authors: Jiang, J., Natarajan, K., Margulies, D.H.
PDB entry 9oaa: The structure of TdfH from Neisseria gonorrhoeae
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Neisseria gonorrhoeae FA 1090
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2025-04-21
Authors: Bera, A., Noinaj, N.
PDB entry 9oab: C3 reconstruction of the thermophilic bacteriophage P74-26 Neck
Classification: VIRUS
Source organism: Oshimavirus P7426
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-04-21
Authors: Sedivy, E.L., Agnello, E., Song, K., Xu, C., Kelch, B.A.
PDB entry 9oac: C5 reconstruction of the thermophilic bacteriophage P74-26 Portal Vertex
Classification: VIRUS
Source organism: Oshimavirus P7426
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-04-21
Authors: Sedivy, E.L., Agnello, E., Song, K., Xu, C., Kelch, B.A.
PDB entry 9oad: C1 reconstruction of the thermophilic bacteriophage P74-26 Portal and Portal Vertex
Classification: VIRUS
Source organism: Oshimavirus P7426
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2025-04-21
Authors: Sedivy, E.L., Agnello, E., Song, K., Xu, C., Kelch, B.A.
PDB entry 9oae: Composite reconstruction of the thermophilic bacteriophage P74-26 Neck and Portal Vertex
Classification: VIRUS/DNA
Source organism: Oshimavirus P7426
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-04-21
Authors: Sedivy, E.L., Agnello, E., Song, K., Xu, C., Kelch, B.A.
PDB entry 9oaf: Room temperature structure of human carbonic anhydrase IX mimic in complex with vorinostat (drug soak)
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2025-04-21
Authors: Gulkis, M.C., McKenna, R., Fisher, S.Z.
PDB entry 9oai: Crystal structure of nucleoside-diphosphate kinase from Cryptosporidium parvum in complex with thymidine-5'-phosphate
Classification: TRANSFERASE
Source organism: Cryptosporidium parvum Iowa II
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2025-04-21
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9oaj: AMC008 v4.2 SOSIP Env trimer in complex with CD4 D1D2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2025-04-21
Authors: Cui, J., Lin, Z., Du, J., Pallesen, J.
PDB entry 9oak: Crystal structure of nucleoside-diphosphate kinase from Cryptosporidium parvum in complex with cytidine-5'-diphosphate and cytidine-5'-triphosphate
Classification: TRANSFERASE
Source organism: Cryptosporidium parvum Iowa II
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2025-04-21
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9oal: Cryo-EM structure of EBV gB prefusion construct C3-GT
Classification: VIRAL PROTEIN
Source organism: human gammaherpesvirus 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-21
Authors: McCool, R.S., McLellan, J.S.
PDB entry 9oam: Room temperature structure of carbonic anhydrase II in complex with vorinostat (co-crystal)
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2025-04-21
Authors: Gulkis, M.C., McKenna, R., Fisher, S.Z.
PDB entry 9oan: Crystal structure of nucleoside-diphosphate kinase from Cryptosporidium parvum in complex with with guanosine-5'-diphosphate and AMP-PNP
Classification: TRANSFERASE
Source organism: Cryptosporidium parvum Iowa II
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2025-04-21
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9oao: Crystal structure of antibody Fab G001-0087 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2025-04-21
Authors: Lin, X., Wilson, I.A.
PDB entry 9oap: Crystal structure of antibody Fab G001-58 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-04-21
Authors: Lin, X., Wilson, I.A.
PDB entry 9oaq: Crystal structure of antibody Fab G001-59 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly-N276
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2025-04-21
Authors: Lin, X., Wilson, I.A.
PDB entry 9oar: Crystal structure of antibody Fab G001-179 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2025-04-21
Authors: Lin, X., Wilson, I.A.
PDB entry 9oas: Crystal structure of antibody Fab G001-14 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly-N276
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2025-04-21
Authors: Lin, X., Wilson, I.A.
PDB entry 9oat: TNA polymerase, 5-270, binary complex
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2025-04-21
Authors: Lee, J.J., Maola, V.A., Barpuzary, B., Chim, N., Chaput, J.C.
PDB entry 9oau: TNA polymerase, 7-47, binary complex
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2025-04-21
Authors: Lee, J.J., Maola, V.A., Chim, N., Chaput, J.C.
PDB entry 9oav: TNA polymerase, 8-64, binary complex
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-21
Authors: Lee, J.J., Maola, V.A., Chim, N., Chaput, J.C.
PDB entry 9oaw: TNA polymerase, 10-92, binary complex
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2025-04-21
Authors: Lee, J.J., Maola, V.A., Chim, N., Chaput, J.C.
PDB entry 9oax: TNA polymerase, 5-270, ternary complex
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2025-04-21
Authors: Lee, J.J., Maola, V.A., Chim, N., Chaput, J.C.
PDB entry 9oay: TNA polymerase, 8-64, ternary complex
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2025-04-21
Authors: Lee, J.J., Maola, V.A., Chim, N., Chaput, J.C.
PDB entry 9ob0: Human PU.1 ETS-Domain (165-270) Bound to d(5'-AATAAGCGIAAGTGGG-3') d(5'-TCCCACTTTCGCTTAT-3') with an IT mismatch
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2025-04-21
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 9ob1: S.c INO80 in complex with Yeast 0/80 nucleosome, Apo State
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-21
Authors: Wu, H., Kaur, U., Narlikar, G.J., Cheng, Y.F.
PDB entry 9ob2: CDK2/CyclinE bound to compound 11 with P-loop in the EE and CC conformations
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2025-04-22
Authors: Baird, J., Holliday, M.J.
PDB entry 9ob3: CDK2/CyclinE bound to compound 16 with P-loop in the EE conformation
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2025-04-22
Authors: Baird, J., Holliday, M.J.
PDB entry 9ob4: CDK2/CyclinE bound to compound 19 with P-loop in the EE and EC conformations
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-04-22
Authors: Baird, J., Holliday, M.J.
PDB entry 9ob5: CDK2/CyclinE bound to compound 20 with P-loop in the EE and CC conformations
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-22
Authors: Baird, J., Holliday, M.J.
PDB entry 9ob6: CDK2/CyclinE bound to compound 21 with P-loop in the EE and CC conformations
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-04-22
Authors: Baird, J., Holliday, M.J.
PDB entry 9ob7: Crystal structure of delipidated human fatty acid binding protein 4 (FABP4) in the apo form
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-04-22
Authors: Birchfield, A.B., Musayev, F.N., Fuglestad, B.