LiteFold/PDB huggingface dataset:
PDB entry 4e7l: PFV integrase Strand Transfer Complex (STC-Mn*) following reaction in crystallo, at 3.0 A resolution.
Classification: RECOMBINATION/DNA
Source organism: Human spumaretrovirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.0001 Å
Deposited: 2012-03-17
Authors: Maertens, G.N., Cherepanov, P.
PDB entry 4e7n: Crystal Structure of AhV_TL-I, a Glycosylated Snake-venom Thrombin-like Enzyme from Agkistrodon halys
Classification: HYDROLASE
Source organism: Agkistrodon halys
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-03-18
Authors: Zeng, F., Li, X., Teng, M., Niu, L.
PDB entry 4e7o: Crystal structure of receiver domain of putative NarL family response regulator spr1814 from Streptococcus pneumoniae
Classification: TRANSCRIPTION REGULATOR
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2012-03-18
Authors: Park, A.K., Moon, J.H., Lee, K.S., Chi, Y.M.
PDB entry 4e7p: Crystal structure of receiver domain of putative NarL family response regulator spr1814 from Streptococcus pneumoniae in the presence of the phosphoryl analog beryllofluoride
Classification: TRANSCRIPTION REGULATOR
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2012-03-18
Authors: Park, A.K., Moon, J.H., Lee, K.S., Chi, Y.M.
PDB entry 4e7r: Thrombin in complex with 3-amidinophenylalanine inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-03-19
Authors: Ruehmann, E., Heine, A., Klebe, G.
PDB entry 4e7s: Myosin VI D23R I24R R569E (MD) pre-powerstroke state
Classification: MOTOR PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-03-19
Authors: Isabet, T., Sweeney, H.L., Houdusse, A.
PDB entry 4e7t: The structure of T6 bovine insulin
Classification: HORMONE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2012-03-19
Authors: Harris, P., Frankaer, C.G., Knudsen, M.V.
PDB entry 4e7u: The structure of T3R3 bovine insulin
Classification: HORMONE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2012-03-19
Authors: Harris, P., Frankaer, C.G., Knudsen, M.V.
PDB entry 4e7v: The structure of R6 bovine insulin
Classification: HORMONE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-03-19
Authors: Harris, P., Frankaer, C.G., Knudsen, M.V.
PDB entry 4e7w: Structure of GSK3 from Ustilago maydis
Classification: TRANSFERASE
Source organism: Ustilago maydis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2012-03-19
Authors: Gruetter, C., Rauh, D.
PDB entry 4e7x: Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Classification: TRANSFERASE
Source organism: Schizosaccharomyces pombe 972h-
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2012-03-19
Authors: Yates, L.A., Fleurdepine, S., Rissland, O.S., DeColibus, L., Harlos, K., Norbury, C.J., Gilbert, R.J.C.
PDB entry 4e7y: Lambda-[Ru(phen)2(dppz)]2+ Bound to CCGGATCCGG
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-03-19
Authors: Hall, J.P., Cardin, C.J.
PDB entry 4e7z: Myosin VI (MD) pre-powerstroke state, P21 crystal form
Classification: MOTOR PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-03-19
Authors: Isabet, T., Sweeney, H.L., Houdusse, A.
PDB entry 4e80: Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Classification: TRANSFERASE
Source organism: Schizosaccharomyces pombe 972h-
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2012-03-19
Authors: Yates, L.A., Fleurdepine, S., Rissland, O.S., DeColibus, L., Harlos, K., Norbury, C.J., Gilbert, R.J.C.
PDB entry 4e81: Crystal structure of the substrate binding domain of E.coli DnaK in complex with a short apidaecin peptide
Classification: CHAPERONE
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-03-19
Authors: Zahn, M., Straeter, N.
PDB entry 4e82: Crystal structure of monomeric variant of human alpha-defensin 5, HD5 (Glu21EMe mutant)
Classification: ANTIMICROBIAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-03-19
Authors: Pazgier, M.
PDB entry 4e83: Crystal structure of human alpha-defensin 5, HD5 (Leu29NLe mutant)
Classification: ANTIMICROBIAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-03-19
Authors: Pazgier, M.
PDB entry 4e84: Crystal Structure of Burkholderia cenocepacia HldA
Classification: TRANSFERASE
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-03-19
Authors: Lee, T.-W., Junop, M.S.
PDB entry 4e85: crystal STRUCTURE OF HAT DOMAIN OF RNA14
Classification: STRUCTURAL PROTEIN
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-03-19
Authors: Paulson, A.R., Tong, L.
PDB entry 4e86: Crystal structure of human alpha-defensin 5, HD5 (Leu29Aba mutant)
Classification: ANTIMICROBIAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2012-03-19
Authors: Wu, X., Pazgier, M.
PDB entry 4e88: CRYSTAL STRUCTURE OF DE NOVO DESIGNED CYSTEINE ESTERASE ECH13, Northeast Structural Genomics Consortium Target OR51
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-03-19
Authors: Kuzin, A., Su, M., Seetharaman, J., Xiao, X., Sahdev, S., Ciccosanti, C., Richter, F., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 4e89: Crystal Structure of RnaseH from gammaretrovirus
Classification: HYDROLASE
Source organism: Xenotropic MuLV-related virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-03-19
Authors: Kim, J.H., Kim, S.J.
PDB entry 4e8a: The crystal structure of p38a MAP kinase in complex with PIA24
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-03-20
Authors: Livnah, O., Tzarum, N., Eisenberg-Domovich, Y.
PDB entry 4e8b: Crystal structure of 16S rRNA Methyltransferase RsmE from E.coli
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.249 Å
Deposited: 2012-03-20
Authors: Zhang, H., Gao, Z.Q., Dong, Y.H.
PDB entry 4e8c: Crystal structure of streptococcal beta-galactosidase in complex with galactose
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-03-20
Authors: Cheng, W., Wang, L., Bai, X.H., Jiang, Y.L., Li, Q., Yu, G., Zhou, C.Z., Chen, Y.X.
PDB entry 4e8d: Crystal structure of streptococcal beta-galactosidase
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-03-20
Authors: Cheng, W., Wang, L., Bai, X.H., Jiang, Y.L., Li, Q., Yu, G., Zhou, C.Z., Chen, Y.X.
PDB entry 4e8e: Structural characterization of Bombyx mori glutathione transferase BmGSTD1
Classification: TRANSFERASE
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2012-03-20
Authors: Tan, X., Ma, X.X., Hu, X.M., Chen, Q.M., Zhao, P., Xia, Q.Y., Zhou, C.Z.
PDB entry 4e8f: Structural Basis for the Activity of a Cytoplasmic RNA Terminal U-transferase
Classification: TRANSFERASE
Source organism: Schizosaccharomyces pombe 972h-
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-03-20
Authors: Yates, L.A., Fleurdepine, S., Rissland, O.S., DeColibus, L., Harlos, K., Norbury, C.J., Gilbert, R.J.C.
PDB entry 4e8g: Crystal structure of an enolase (mandelate racemase subgroup) from paracococus denitrificans pd1222 (target nysgrc-012907) with bound mg
Classification: ISOMERASE
Source organism: Paracoccus denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-03-20
Authors: Vetting, M.W., Toro, R., Bhosle, R., Wasserman, S.R., Morisco, L.L., Sojitra, S., Chamala, S., Kar, A., Lafleur, J., Villigas, G., Evans, B., Hammonds, J., Gizzi, A., Zencheck, W.D., Hillerich, B., Love, J., Seidel, R.D., Bonanno, J.B., Gerlt, J.A., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4e8h: Structural of Bombyx mori glutathione transferase BmGSTD1 complex with GTT
Classification: TRANSFERASE
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2012-03-20
Authors: Tan, X., Ma, X.X., Hu, X.M., Chen, Q.M., Zhao, P., Xia, Q.Y., Zhou, C.Z.
PDB entry 4e8k: Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and a non-hydrolyzed oligonucleotide substrate
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2012-03-20
Authors: Marcia, M., Pyle, A.M.
PDB entry 4e8m: Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Mg2+
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2012-03-20
Authors: Marcia, M., Pyle, A.M.
PDB entry 4e8n: Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2012-03-20
Authors: Marcia, M., Pyle, A.M.
PDB entry 4e8o: Crystal structure of aminoglycoside antibiotic 6'-N-acetyltransferase AAC(6')-Ih from Acinetobacter baumannii
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.138 Å
Deposited: 2012-03-20
Authors: Stogios, P.J., Minasov, G., Dong, A., Evdokimova, E., Yim, V., Courvalin, P., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4e8p: Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Rb+ and Mg2+
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2012-03-20
Authors: Marcia, M., Pyle, A.M.
PDB entry 4e8q: Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2012-03-20
Authors: Marcia, M., Pyle, A.M.
PDB entry 4e8r: Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.36 Å
Deposited: 2012-03-20
Authors: Marcia, M., Pyle, A.M.
PDB entry 4e8s: Lambda-[Ru(TAP)2(dppz{Me2}2)]2+ bound to TCGGCGCCGA at high resolution
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2012-03-20
Authors: Hall, J.P., Cardin, C.J.
PDB entry 4e8t: Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and an oligonucleotide fragment substrate (low energy dataset)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.34 Å
Deposited: 2012-03-20
Authors: Marcia, M., Pyle, A.M.
PDB entry 4e8u: Crystal structure of Arabidopsis IDN2 XS domain along with a small segment of adjacent coiled-coil region
Classification: RNA BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2012-03-20
Authors: Simanshu, D.K., Patel, D.J.
PDB entry 4e8v: Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.995 Å
Deposited: 2012-03-20
Authors: Marcia, M., Pyle, A.M.
PDB entry 4e8w: Crystal Structure of Burkholderia cenocepacia HldA in Complex with an ATP-competitive Inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8654 Å
Deposited: 2012-03-20
Authors: Lee, T.-W., Verhey, T.B., Junop, M.S.
PDB entry 4e8x: Lambda-[Ru(TAP)2(dppz-(Me)2)]2+ bound to d(CCGGCGCCGG)2
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2012-03-20
Authors: Hall, J.P., Cardin, C.J.
PDB entry 4e8y: Crystal Structure of Burkholderia cenocepacia HldA in Complex with an ATP-competitive Inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-03-20
Authors: Lee, T.-W., Verhey, T.B., Junop, M.S.
PDB entry 4e8z: Crystal Structure of Burkholderia cenocepacia HldA in Complex with an ATP-competitive Inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2012-03-20
Authors: Lee, T.-W., Verhey, T.B., Junop, M.S.
PDB entry 4e90: Human phosphodiesterase 9 in complex with inhibitors
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-03-20
Authors: Liu, S.
PDB entry 4e91: Crystal Structure of the N-Terminal Domain of HIV-1 Capsid in Complex With Inhibitor BD3
Classification: STRUCTURAL PROTEIN/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-03-20
Authors: Lemke, C.T.
PDB entry 4e92: Crystal Structure of the N-Terminal Domain of HIV-1 Capsid in Complex With Inhibitor BM4
Classification: STRUCTURAL PROTEIN/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-03-20
Authors: Lemke, C.T.
PDB entry 4e93: Crystal structure of human Feline Sarcoma Viral Oncogene Homologue (v-FES)in complex with TAE684
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2012-03-20
Authors: Filippakopoulos, P., Salah, E., Miduturu, C.V., Fedorov, O., Cooper, C., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Gray, N.S., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 4e94: Crystal structure of MccF-like protein from Streptococcus pneumoniae
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.651 Å
Deposited: 2012-03-20
Authors: Nocek, B., Tikhonov, A., Kwon, K., Severinov, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4e95: Lambda-[Ru(TAP)2(dppz-(Me)2)]2+ bound to CCGGATCCGG
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2012-03-20
Authors: Hall, J.P., Cardin, C.J.
PDB entry 4e96: Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor PFi-1
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2012-03-20
Authors: Filippakopoulos, P., Picaud, S., Felletar, I., Fedorov, O., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Fish, P., Bunnage, M., Owen, D., Knapp, S., Cook, A., Structural Genomics Consortium (SGC)
PDB entry 4e97: T4 Lysozyme L99A/M102H with 2-Mercaptoethanol Bound
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2012-03-20
Authors: Merski, M., Shoichet, B.K.
PDB entry 4e98: Crystal structure of possible CutA1 divalent ion tolerance protein from Cryptosporidium parvum Iowa II
Classification: SIGNALING PROTEIN
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-03-20
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID), Buchko, G.W., Robinson, H.
PDB entry 4e99: Human Serum Albumin Complex with Perfluorooctane Sulfonate Potassium
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-03-20
Authors: Luo, Z.P., Shi, X.L., Huang, M.D.
PDB entry 4e9a: Structure of Peptide Deformylase form Helicobacter Pylori in complex with inhibitor
Classification: HYDROLASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.662 Å
Deposited: 2012-03-20
Authors: Cui, K., Zhu, L., Lu, W., Huang, J.
PDB entry 4e9b: Structure of Peptide Deformylase form Helicobacter Pylori in complex with actinonin
Classification: HYDROLASE/HYDROLASE INHIBTIOR
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-03-20
Authors: Cui, K., Zhu, L., Lu, W., Huang, J.
PDB entry 4e9c: The structure of the polo-box domain (PBD) of polo-like kinase 1 (Plk1) in complex with LDPPLHSpTA phosphopeptide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-03-21
Authors: Sledz, P., Hyvonen, M., Lang, S., Stubbs, C.J., Abell, C.
PDB entry 4e9d: The structure of the polo-box domain (PBD) of polo-like kinase 1 (Plk1) in complex with 3-(1-benzothiophen-2-yl)propanoyl-derivatized DPPLHSpTA peptide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2012-03-21
Authors: Sledz, P., Hyvonen, M., Lang, S., Stubbs, C.J., Abell, C.
PDB entry 4e9e: Structure of the glycosylase domain of MBD4
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-03-21
Authors: Morera, S., Vigouroux, A.
PDB entry 4e9f: Structure of the glycosylase domain of MBD4 bound to AP site containing DNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2012-03-21
Authors: Morera, S., Vigouroux, A.
PDB entry 4e9g: structure of the glycosylase domain of MBD4 bound to thymine containing DNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-03-21
Authors: Morera, S., Vigouroux, A.
PDB entry 4e9h: structure of glycosylase domain of MBD4 bound to 5hmU containing DNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-03-21
Authors: Morera, S., Vigouroux, A.
PDB entry 4e9j: Crystal structure of the N-terminal domain of the secretin XcpQ from Pseudomonas aeruginosa
Classification: PROTEIN TRANSPORT
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2012-03-21
Authors: Van der Meeren, R.
PDB entry 4e9k: Crystal structure of a DUF4465 family protein (BACOVA_04221) from Bacteroides ovatus ATCC 8483 at 2.31 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2012-03-21
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4e9l: FdeC, a Novel Broadly Conserved Escherichia coli Adhesin Eliciting Protection against Urinary Tract Infections
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-03-21
Authors: Spraggon, G., Nesta, B., Alteri, C., Gomes Moriel, D., Rosini, R., Veggi, D., Smith, S., Bertoldi, I., Pastorello, I., Ferlenghi, I., Fontana, M.R., Frankel, G., Mobley, H.L.T., Rappuoli, R., Pizza, M., Serino, L., Soriana, M.
PDB entry 4e9m: NOD1 card domain with three disulfide-clinched, domain-swapped dimers in the asymmetric unit
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2012-03-21
Authors: Berry, E.A., Huang, L.S., Walker-Kopp, N.
PDB entry 4e9o: Vaccinia D8L ectodomain structure
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2012-03-21
Authors: Matho, M.H., Zajonc, D.M.
PDB entry 4e9q: Multicopper Oxidase CueO (data2)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2012-03-21
Authors: Komori, H., Kataoka, K., Sakurai, T., Higuchi, Y.
PDB entry 4e9r: Multicopper Oxidase CueO (data4)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2012-03-21
Authors: Komori, H., Kataoka, K., Sakurai, T., Higuchi, Y.
PDB entry 4e9s: Multicopper Oxidase CueO (data5)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2012-03-21
Authors: Komori, H., Kataoka, K., Sakurai, T., Higuchi, Y.
PDB entry 4e9t: Multicopper Oxidase CueO (data6)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2012-03-21
Authors: Komori, H., Kataoka, K., Sakurai, T., Higuchi, Y.
PDB entry 4e9u: Crystal structure of dehydrosqualene synthase (Crtm) from S. aureus complexed with a thiocyanate inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-03-21
Authors: Lin, F.-Y., Axelson, J., Liu, Y.-L., Zhnag, Y., Oldfield, E.
PDB entry 4e9v: Multicopper Oxidase mgLAC (data1)
Classification: METAL BINDING PROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-03-21
Authors: Komori, H., Miyazaki, K., Higuchi, Y.
PDB entry 4e9w: Multicopper Oxidase mgLAC (data2)
Classification: METAL BINDING PROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2012-03-21
Authors: Komori, H., Miyazaki, K., Higuchi, Y.
PDB entry 4e9x: Multicopper Oxidase mgLAC (data3)
Classification: METAL BINDING PROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2012-03-21
Authors: Komori, H., Miyazaki, K., Higuchi, Y.
PDB entry 4e9y: Multicopper Oxidase mgLAC (data4)
Classification: METAL BINDING PROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-03-21
Authors: Komori, H., Miyazaki, K., Higuchi, Y.
PDB entry 4e9z: Crystal structure of dehydrosqualene synthase (Crtm) from S. aureus complexed with quinuclidine BPH-651 in the S1 site
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2012-03-21
Authors: Lin, F.-Y., Liu, Y.-L., Oldfield, E.
PDB entry 4ea0: Crystal structure of dehydrosqualene synthase (Crtm) from S. aureus complexed with diphosphate and quinuclidine BPH-651
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2012-03-21
Authors: Lin, F.-Y., Liu, Y.-L., Oldfield, E.
PDB entry 4ea1: Co-crystal structure of dehydrosqualene synthase (Crtm) from S. aureus with SQ-109
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2012-03-21
Authors: Lin, F.-Y., Li, K., Liu, Y.-L., Oldfield, E.
PDB entry 4ea2: Crystal structure of dehydrosqualene synthase (Crtm) aureus complexed with SQ-109
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2012-03-21
Authors: Lin, F.-Y., Li, K., Liu, Y.-L., Oldfield, E.
PDB entry 4ea3: Structure of the N/OFQ Opioid Receptor in Complex with a Peptide Mimetic
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo Sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.013 Å
Deposited: 2012-03-22
Authors: Thompson, A.A., Liu, W., Chun, E., Katritch, V., Wu, H., Vardy, E., Huang, X.P., Trapella, C., Guerrini, R., Calo, G., Roth, B.L., Cherezov, V., Stevens, R.C., GPCR Network (GPCR)
PDB entry 4ea4: Structure of the glycosylase domain of MBD4 bound to 5hmU-containing DNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-03-22
Authors: Morera, S., Vigouroux, A.
PDB entry 4ea5: Structure of the glycoslyase domain of MBD4 bound to a 5hmU containing DNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2012-03-22
Authors: Morera, S., Vigouroux, A.
PDB entry 4ea6: Crystal structure of Fungal lipase from Thermomyces(Humicola) lanuginosa at 2.30 Angstrom resolution.
Classification: HYDROLASE
Source organism: Thermomyces lanuginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-03-22
Authors: Kumar, M., Mukherjee, J., Gupta, M.N., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4ea7: X-ray crystal structure of PerB from Caulobacter crescentus in complex with CoA and GDP-perosamine at 1.0 Angstrom resolution
Classification: TRANSFERASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2012-03-22
Authors: Thoden, J.B., Reinhardt, L.A., Cook, P.D., Menden, P., Cleland, W.W., Holden, H.M.
PDB entry 4ea8: X-ray crystal structure of PerB from Caulobacter crescentus in complex with coenzyme A and GDP-N-acetylperosamine at 1 Angstrom resolution
Classification: TRANSFERASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2012-03-22
Authors: Thoden, J.B., Reinhardt, L.A., Cook, P.D., Menden, P., Cleland, W.W., Holden, H.M.
PDB entry 4ea9: X-ray structure of GDP-perosamine N-acetyltransferase in complex with transition state analog at 0.9 Angstrom resolution
Classification: TRANSFERASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2012-03-22
Authors: Thoden, J.B., Reinhardt, L.A., Cook, P.D., Menden, P., Cleland, W.W., Holden, H.M.
PDB entry 4eaa: X-ray crystal structure of the H141N mutant of perosamine N-acetyltransferase from Caulobacter crescentus in complex with CoA and GDP-perosamine
Classification: TRANSFERASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2012-03-22
Authors: Thoden, J.B., Reinhardt, L.A., Cook, P.D., Menden, P., Cleland, W.W., Holden, H.M.
PDB entry 4eab: X-ray crystal structure of the H141A mutant of GDP-perosamine N-acetyl transferase from Caulobacter crescentus in complex with CoA and GDP-perosamine
Classification: TRANSFERASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2012-03-22
Authors: Thoden, J.B., Reinhardt, L.A., Cook, P.D., Menden, P., Cleland, W.W., Holden, H.M.
PDB entry 4eac: Crystal structure of mannonate dehydratase from Escherichia coli strain K12
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-03-22
Authors: Qiu, X., Zhu, Y., Yuan, Y., Zhang, Y., Liu, H., Gao, Y., Teng, M., Niu, L.
PDB entry 4ead: Thymidine phosphorylase from E.coli with 3'-azido-2'-fluoro-dideoxyuridine
Classification: Transferase/Transferase inhibitor
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-03-22
Authors: Timofeev, V.I., Abramchik, Y.A., Esipov, R.S., Kuranova, I.P.
PDB entry 4eae: The crystal structure of a functionally unknown protein from Listeria monocytogenes EGD-e
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2012-03-22
Authors: Tan, K., Zhou, M., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4eaf: Thymidine phosphorylase from E.coli
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2012-03-22
Authors: Timofeev, V.I., Abramchik, Y.A., Esipov, R.S., Kuranova, I.P.
PDB entry 4eag: Co-crystal structure of an chimeric AMPK core with ATP
Classification: TRANSFERASE
Source organism: Drosophila melanogaster; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2012-03-22
Authors: Chen, L., Wang, J., Zhang, Y.-Y., Yan, S.F., Neumann, D., Schlattner, U., Wang, Z.-X., Wu, J.-W.
PDB entry 4eah: Crystal structure of the formin homology 2 domain of FMNL3 bound to actin
Classification: PROTEIN BINDING
Source organism: Mus musculus; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2012-03-22
Authors: Thompson, M.E., Heimsath, E.G., Gauvin, T.J., Higgs, H.N., Kull, F.J.
PDB entry 4eai: Co-crystal structure of an AMPK core with AMP
Classification: TRANSFERASE
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.285 Å
Deposited: 2012-03-22
Authors: Chen, L., Wang, J., Zhang, Y.-Y., Yan, S.F., Neumann, D., Schlattner, U., Wang, Z.-X., Wu, J.-W.
PDB entry 4eaj: Co-crystal of AMPK core with AMP soaked with ATP
Classification: TRANSFERASE
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.609 Å
Deposited: 2012-03-22
Authors: Chen, L., Wang, J., Zhang, Y.-Y., Yan, S.F., Neumann, D., Schlattner, U., Wang, Z.-X., Wu, J.-W.
PDB entry 4eak: Co-crystal structure of an AMPK core with ATP
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-03-22
Authors: Chen, L., Wang, J., Zhang, Y.-Y., Yan, S.F., Neumann, D., Schlattner, U., Wang, Z.-X., Wu, J.-W.
PDB entry 4eal: Co-crystal of AMPK core with ATP soaked with AMP
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.506 Å
Deposited: 2012-03-22
Authors: Chen, L., Wang, J., Zhang, Y.-Y., Yan, S.F., Neumann, D., Schlattner, U., Wang, Z.-X., Wu, J.-W.
PDB entry 4eam: 1.70A resolution structure of apo beta-glycosidase (W33G) from sulfolobus solfataricus
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus P2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-03-22
Authors: Lovell, S., Battaile, K.P., Deckert, K., Brunner, L.C., Budiardjo, S.J., Karanicolas, J.
PDB entry 4ean: 1.75A resolution structure of indole bound beta-glycosidase (W33G) from sulfolobus solfataricus
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus P2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-03-22
Authors: Lovell, S., Battaile, K.P., Deckert, K., Brunner, L.C., Budiardjo, S.J., Karanicolas, J.
PDB entry 4eaq: Crystal structure of Thymidylate Kinase from Staphylococcus aureus in complex with 3'-Azido-3'-Deoxythymidine-5'-Monophosphate
Classification: transferase/transferase inhibitor
Source organism: Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-03-22
Authors: Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Jedrzejczak, R., Babnigg, G., Rubin, E., Sacchettini, J., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
PDB entry 4ear: Crystal structure of purine nucleoside phosphorylase (W16Y, W94Y, W178Y, H257W) mutant from human complexed with DADMe-ImmG and phosphate
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-03-22
Authors: Haapalainen, A.M., Ho, M.C., Suarez, J.J., Almo, S.C., Schramm, V.L.
PDB entry 4eat: Crystal structure of a benzoate coenzyme A ligase
Classification: LIGASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.798 Å
Deposited: 2012-03-22
Authors: Geiger, J., Strom, S.
PDB entry 4eaw: HCV NS5B in complex with IDX375
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Hepatitis C virus subtype 1b
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-03-22
Authors: Dousson, C.B., Paparin, J.-L., Surleraux, D., Augustin, M., Blaesse, M., Hoeppner, S., Krapp, S., Wenzkowski, C.
PDB entry 4eax: Mouse NGF in complex with Lyso-PS
Classification: HORMONE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-03-23
Authors: Jiang, T., Tong, Q.
PDB entry 4eay: Crystal structures of mannonate dehydratase from Escherichia coli strain K12 complexed with D-mannonate
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-03-23
Authors: Qiu, X., Zhu, Y., Yuan, Y., Zhang, Y., Liu, H., Gao, Y., Teng, M., Niu, L.
PDB entry 4eb0: Crystal structure of Leaf-branch compost bacterial cutinase homolog
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-03-23
Authors: Sulaiman, S., You, D.J., Eiko, K., Koga, Y., Kanaya, S.
PDB entry 4eb1: Hyperstable in-frame insertion variant of antithrombin
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-03-23
Authors: Martinez-Martinez, I., Johnson, D.J.D., Yamasaki, M., Corral, J., Huntington, J.A.
PDB entry 4eb2: Crystal structure Mistletoe Lectin I from Viscum album in complex with n-acetyl-d-glucosamine at 1.94 A resolution.
Classification: HYDROLASE/SUGAR BINDING PROTEIN
Source organism: Viscum album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2012-03-23
Authors: Laskov, A.A., Prokofev, I.I., Gabdoulkhakov, A.G., Betzel, C., Mikhailov, A.M.
PDB entry 4eb3: Crystal structure of IspH in complex with iso-HMBPP
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-03-23
Authors: Wang, W., Wang, K., Span, I., Bacher, A., Groll, M., Oldfield, E.
PDB entry 4eb4: Crystal structure of mouse thymidylate synthase in ternary complex with dUMP and Tomudex
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2012-03-23
Authors: Dowiercial, A., Jarmula, A., Rypniewski, W.R., Wilk, P., Rode, W.
PDB entry 4eb5: A. fulgidus IscS-IscU complex structure
Classification: Transferase/metal binding protein
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2012-03-23
Authors: Marinoni, E.N., de Oliveira, J.S., Nicolet, Y., Raulfs, E.C., Amara, P., Dean, D.R., Fontecilla-Camps, J.C.
PDB entry 4eb6: Tubulin-Vinblastine: Stathmin-like complex
Classification: STRUCTURAL PROTEIN/INHIBITOR
Source organism: Ovis aries; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.47 Å
Deposited: 2012-03-23
Authors: Ranaivoson, F.M., Gigant, B., Knossow, M.
PDB entry 4eb7: A. fulgidus IscS-IscU complex structure
Classification: Transferase/metal binding protein
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2012-03-23
Authors: Marinoni, E.N., de Oliveira, J.S., Nicolet, Y., Raulfs, E.C., Amara, P., Dean, D.R., Fontecilla-Camps, J.C.
PDB entry 4eb8: Crystal structure of purine nucleoside phosphorylase (W16Y, W94Y, W178Y, H257W) mutant from human complexed with DADMe-ImmG and phosphate
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-03-23
Authors: Ho, M.C., Haapalainen, A.M., Suarez, J.J., Almo, S.C., Schramm, V.L.
PDB entry 4eb9: cIAP1-BIR3 in complex with a divalent Smac mimetic
Classification: APOPTOSIS INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-03-23
Authors: Cossu, F., Mastrangelo, E., Bolognesi, M., Milani, M.
PDB entry 4eba: Crystal structure of the Rna14-Rna15 complex
Classification: STRUCTURAL PROTEIN/RNA BINDING PROTEIN
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2012-03-23
Authors: Paulson, A.R., Tong, L.
PDB entry 4ebb: Structure of DPP2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-03-23
Authors: Shewchuk, L.M., Hassell, A.H., Sweitzer, S.M., Sweitzer, T.D., McDevitt, P.J., Kennedy-Wilson, K.M., Johanson, K.O.
PDB entry 4ebc: Conformationally Restrained North-methanocarba-2'-deoxyadenosine Corrects the Error-Prone Nature of Human DNA Polymerase Iota
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.901 Å
Deposited: 2012-03-23
Authors: Eoff, R.L., Ketkar, A., Banerjee, S.
PDB entry 4ebd: Conformationally Restrained North-methanocarba-2'-deoxyadenosine Corrects the Error-Prone Nature of Human DNA Polymerase Iota
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.571 Å
Deposited: 2012-03-23
Authors: Eoff, R.L., Ketkar, A., Banerjee, S.
PDB entry 4ebe: Conformationally Restrained North-methanocarba-2'-deoxyadenosine Corrects the Error-Prone Nature of Human DNA Polymerase Iota
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-03-23
Authors: Eoff, R.L., Ketkar, A., Banerjee, S.
PDB entry 4ebf: SeMet thermostable phosphite dehydrogenase Glu175-Ala mutant
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas stutzeri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-03-23
Authors: Zou, Y., Zhang, H., Nair, S.K.
PDB entry 4ebg: Crystal structure of a DUF4467 family protein (SAV0303) from Staphylococcus aureus subsp. aureus Mu50 at 1.35 A resolution
Classification: UNKNOWN FUNCTION
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2012-03-23
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4ebj: Crystal structure of aminoglycoside 4'-O-adenylyltransferase ANT(4')-IIb, apo
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-03-23
Authors: Stogios, P.J., Wawrzak, Z., Minasov, G., Evdokimova, E., Egorova, O., Yim, V., Kudritska, M., Courvalin, P., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4ebk: Crystal structure of aminoglycoside 4'-O-adenylyltransferase ANT(4')-IIb, tobramycin-bound
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2012-03-23
Authors: Stogios, P.J., Dong, A., Minasov, G., Evdokimova, E., Egorova, O., Yim, V., Kudritska, M., Courvalin, P., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4ebl: BlaC E166A Faropenem Acyl-Intermediate Complex
Classification: Hydrolase/Antibiotic
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-03-23
Authors: Mire, J.A., TB Structural Genomics Consortium (TBSGC)
PDB entry 4ebn: BlaC Amoxicillin Acyl-Intermediate Complex
Classification: Hydrolase/Antibiotic
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2012-03-23
Authors: Mire, J.A., TB Structural Genomics Consortium (TBSGC)
PDB entry 4ebp: BlaC E166A Cefotaxime Acyl-Intermediate Complex
Classification: Hydrolase/Antibiotic
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2012-03-23
Authors: Mire, J.A., TB Structural Genomics Consortium (TBSGC)
PDB entry 4ebq: Fab structure of anti-Vaccinia virus D8L antigen mouse IgG2a LA5
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-03-23
Authors: Matho, M.H., Zajonc, D.M.
PDB entry 4ebr: Crystal structure of Autophagic E2, Atg10
Classification: LIGASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2012-03-24
Authors: Hong, S.B., Kim, B.W., Kim, J.H., Song, H.K.
PDB entry 4ebu: Crystal structure of a sugar kinase (Target EFI-502312) from Oceanicola granulosus, with bound AMP/ADP crystal form I
Classification: TRANSFERASE
Source organism: Oceanicola granulosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-03-24
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4ebv: Structure of Focal Adhesion Kinase catalytic domain in complex with novel allosteric inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2012-03-25
Authors: Skene, R.J., Hosfield, D.J.
PDB entry 4ebw: Structure of Focal Adhesion Kinase catalytic domain in complex with novel allosteric inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2012-03-25
Authors: Iwatani, M., Iwata, H., Okabe, A., Skene, R.J., Tomita, N., Hayashi, Y., Aramaki, Y., Hosfield, D.J., Hori, A., Baba, A., Miki, H.
PDB entry 4eby: Crystal structure of the ectodomain of a receptor like kinase
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2012-03-25
Authors: Chai, J., Liu, T., Han, Z., She, J, Wang, J.
PDB entry 4ebz: Crystal structure of the ectodomain of a receptor like kinase
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.792 Å
Deposited: 2012-03-26
Authors: Chai, J., Liu, T., Han, Z., She, J, Wang, J.
PDB entry 4ec0: Crystal structure of hH-PGDS with water displacing inhibitor
Classification: isomerase/isomerase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-03-26
Authors: Day, J.E., Thorarensen, A., Trujillo, J.I.
PDB entry 4ec2: Crystal structure of trimeric frataxin from the yeast Saccharomyces cerevisiae, complexed with ferrous
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.002 Å
Deposited: 2012-03-26
Authors: Soderberg, C.A.G., Rajan, S., Gakh, O., Isaya, G., Al-Karadaghi, S.
PDB entry 4ec3: Structure of berberine bridge enzyme, H174A variant in complex with (S)-reticuline
Classification: OXIDOREDUCTASE
Source organism: Eschscholzia californica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6501 Å
Deposited: 2012-03-26
Authors: Winkler, A., Macheroux, P., Gruber, K.
PDB entry 4ec4: XIAP-BIR3 in complex with a potent divalent Smac mimetic
Classification: APOPTOSIS INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2012-03-26
Authors: Mastrangelo, E., Cossu, F., Bolognesi, M., Milani, M.
PDB entry 4ec5: Crystal structure of the S210C (dimer) mutant from the N-terminal domain of the secretin XcpQ from Pseudomonas aeruginosa
Classification: PROTEIN TRANSPORT
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.197 Å
Deposited: 2012-03-26
Authors: Van der Meeren, R., Savvides, S.
PDB entry 4ec6: Ntf2-like, potential transfer protein TraM from Gram-positive conjugative plasmid pIP501
Classification: UNKNOWN FUNCTION
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-03-26
Authors: Goessweiner-Mohr, N., Grumet, L., Pavkov-Keller, T., Wang, M., Keller, W.
PDB entry 4ec7: Cobra NGF in complex with lipid
Classification: HORMONE
Source organism: Naja atra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-03-26
Authors: Jiang, T., Wang, F., Tong, Q.
PDB entry 4ec8: Structure of full length CDK9 in complex with cyclinT and DRB
Classification: TRANSFERASE/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2012-03-26
Authors: Baumli, S., Hole, A.J., Endicott, J.A.
PDB entry 4ec9: Crystal structure of full-length cdk9 in complex with cyclin t
Classification: TRANSFERASE/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2012-03-26
Authors: Baumli, S., Hole, A.J., Endicott, J.A.
PDB entry 4eca: ASPARAGINASE FROM E. COLI, MUTANT T89V WITH COVALENTLY BOUND ASPARTATE
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1997-02-21
Authors: Palm, G.J., Lubkowski, J., Wlodawer, A.
PDB entry 4ecb: Chimeric GST Containing Inserts of Kininogen Peptides
Classification: TRANSFERASE, PROTEIN BINDING
Source organism: homo sapiens; Schistosoma japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-03-26
Authors: Amber, A.B., Sergei, M.M., Yi, P., Rita, R., Xiaoping, Q., Marianne, P.-C., William, C.M., Vivien, Y., Keith, R.M., Anton, A.K.
PDB entry 4ecc: Chimeric GST Containing Inserts of Kininogen Peptides
Classification: TRANSFERASE, PROTEIN BINDING
Source organism: homo sapiens; Schistosoma japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-03-26
Authors: Amber, A.B., Sergei, M.M., Yi, P., Rita, R., Xiaoping, Q., Marianne, P.-C., William, C.M., Vivien, Y., Keith, R.M., Anton, A.K.
PDB entry 4ecd: 2.5 Angstrom Resolution Crystal Structure of Bifidobacterium longum Chorismate Synthase
Classification: LYASE
Source organism: Bifidobacterium longum subsp. infantis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-03-26
Authors: Light, S.H., Minasov, G., Krishna, S.N., Shuvalova, L., Kwon, K., Lavie, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4ece: Crystal structure of purine nucleoside phosphorylase (W16Y, W94Y, W178Y, H257W) mutant from human complexed with guanine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-03-26
Authors: Haapalainen, A.M., Ho, M.C., Suarez, J.J., Almo, S.C., Schramm, V.L.
PDB entry 4ecf: Crystal structure of an ABC-type phosphate transport system, periplasmic component (LVIS_0633) from Lactobacillus brevis ATCC 367 at 1.55 A resolution
Classification: PHOSPHATE-BINDING PROTEIN
Source organism: Lactobacillus brevis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2012-03-26
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4ecg: Crystal structure of a putative iron-regulated protein A precursor (BDI_2603) from Parabacteroides distasonis ATCC 8503 at 2.30 A resolution
Classification: HYDROLASE
Source organism: Parabacteroides distasonis ATCC 8503
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-03-26
Authors: Joint Center for Structural Genomics (JCSG)