LiteFold/PDB huggingface dataset:
PDB entry 6y6v: p38a bound with MCP-81
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-02-27
Authors: Schroeder, M., Roehm, S., Knapp, S., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Structural Genomics Consortium (SGC)
PDB entry 6y6x: Tetracenomycin X bound to the human ribosome
Classification: ANTIBIOTIC
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-02-27
Authors: Buschauer, R., Cheng, J., Berninghausen, O., Beckmann, R., Wilson, D.N.
PDB entry 6y6y: Pseudomonas stutzeri nitrous oxide reductase mutant, H129A
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas stutzeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2020-02-27
Authors: Zhang, L., Kroneck, P.M.H., Einsle, O.
PDB entry 6y6z: Structure of Pseudomonas aeruginosa Penicillin-Binding Protein 3 (PBP3) in complex with Compound 1
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-02-27
Authors: Newman, H., Bellini, D., Dowson, C.G.
PDB entry 6y71: Pseudomonas stutzeri nitrous oxide reductase mutant, H130A
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas stutzeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-02-27
Authors: Zhang, L., Kroneck, P.M.H., Einsle, O.
PDB entry 6y72: Pseudomonas stutzeri nitrous oxide reductase mutant, H178A
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas stutzeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-02-27
Authors: Zhang, L., Kroneck, P.M.H., Einsle, O.
PDB entry 6y73: The crystal structure of human MACROD2 in space group P43
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-02-28
Authors: Wazir, S., Maksimainen, M.M., Lehtio, L.
PDB entry 6y74: X-ray crystal structure of human carbonic anhydrase IX catalytic domain.
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2020-02-28
Authors: Fisher, S.Z., Koruza, K.
PDB entry 6y75: BIL2 domain from T.thermophila BUBL1 locus (C1A-N143A)
Classification: SPLICING
Source organism: Tetrahymena thermophila (strain SB210)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-02-28
Authors: Ilari, A., Chiarini, V.
PDB entry 6y76: AP01 - a redesigned transferrin receptor apical domain
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-02-28
Authors: Oberdorfer, G., Berger, S.A., Bjelic, S., Sjostrom, D.J.
PDB entry 6y77: Pseudomonas stutzeri nitrous oxide reductase mutant, H326A
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas stutzeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2020-02-28
Authors: Zhang, L., Kroneck, P.M.H., Einsle, O.
PDB entry 6y78: Structure of galectin-3C in complex with lactose determined by serial crystallography using a silicon nitride membrane support
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-02-28
Authors: Hakansson, M., Welin, M., Shilova, A., Kovacic, R., Mueller, U., Logan, D.T.
PDB entry 6y79: Cryo-EM structure of a respiratory complex I F89A mutant
Classification: OXIDOREDUCTASE
Source organism: Yarrowia lipolytica
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2020-02-28
Authors: Parey, K.
PDB entry 6y7a: X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-02-28
Authors: Tarnawski, M., Johnsson, K., Hiblot, J.
PDB entry 6y7b: X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-carbopyronine fluorophore substrate
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2020-02-28
Authors: Tarnawski, M., Johnsson, K., Hiblot, J.
PDB entry 6y7c: Early cytoplasmic yeast pre-40S particle (purified with Tsr1 as bait)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-02-28
Authors: Shayan, R., Plassart, L., Plisson-Chastang, C.
PDB entry 6y7d: Pseudomonas stutzeri nitrous oxide reductase mutant, H433A
Classification: OXIDOREDUCTASE
Source organism: Stutzerimonas stutzeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-02-28
Authors: Zhang, L., Kroneck, P.M.H., Einsle, O.
PDB entry 6y7e: Pseudomonas stutzeri nitrous oxide reductase mutant, H494A
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas stutzeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-02-28
Authors: Zhang, L., Kroneck, P.M.H., Einsle, O.
PDB entry 6y7f: Crystal structure of human ELOVL fatty acid elongase 7 (ELOVL7)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.052 Å
Deposited: 2020-02-28
Authors: Nie, L., Pike, A.C.W., Bushell, S.R., Chu, A., Cole, V., Speedman, D., Rodstrom, K.E.J., Kupinska, K., Shrestha, L., Mukhopadhyay, S.M.M., Burgess-Brown, N.A., Love, J., Edwards, A.M., Arrowsmith, C.H., Bountra, C., Carpenter, E.P., Structural Genomics Consortium (SGC)
PDB entry 6y7g: Structure of the human RAB3C in complex with GDP
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-02-29
Authors: Diaz-Saez, L., Jung, S., Raux, B., Burgess-Brown, N.A., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Huber, K.V.M., Structural Genomics Consortium (SGC)
PDB entry 6y7h: Structure of the BRD9 bromodomain and compound 11
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-03-01
Authors: Diaz-Saez, L., Krojer, T., Picaud, S., von Delft, F., Filippakopoulos, P., Arrowsmith, C.H., Edwards, A., Bountra, C., Huber, K.V.M., Structural Genomics Consortium (SGC)
PDB entry 6y7i: Structure of the BRD9 bromodomain and compound 2
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-03-01
Authors: Diaz-Saez, L., Krojer, T., Picaud, S., von Delft, F., Filippakopoulos, P., Arrowsmith, C.H., Edwards, A., Bountra, C., Huber, K.V.M., Structural Genomics Consortium (SGC)
PDB entry 6y7j: Structure of the BRD9 bromodomain and compound 15
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-03-01
Authors: Diaz-Saez, L., Krojer, T., Picaud, S., von Delft, F., Filippakopoulos, P., Arrowsmith, C.H., Edwards, A., Bountra, C., Huber, K.V.M.
PDB entry 6y7k: Structure of the BRD9 bromodomain and compound 27
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-03-01
Authors: Diaz-Saez, L., Krojer, T., Picaud, S., von Delft, F., Filippakopoulos, P., Arrowsmith, C.H., Edwards, A., Bountra, C., Huber, K.V.M.
PDB entry 6y7l: Structure of the BRD9 bromodomain and TP-472
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-03-01
Authors: Diaz-Saez, L., Krojer, T., Picaud, S., von Delft, F., Filippakopoulos, P., Arrowsmith, C.H., Edwards, A., Bountra, C., Huber, K.V.M.
PDB entry 6y7m: Crystal structure of the complex resulting from the reaction between the SARS-CoV main protease and tert-butyl (1-((S)-3-cyclohexyl-1-(((S)-4-(cyclopropylamino)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)amino)-1-oxopropan-2-yl)-2-oxo-1,2-dihydropyridin-3-yl)carbamate
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-03-01
Authors: Zhang, L., Lin, D., Hilgenfeld, R.
PDB entry 6y7n: The crystal structure of the eight-bladed symmetrical designer protein Tako8 in the presence of tellurotungstic Anderson-Evans (TEW)
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-03-02
Authors: Vandebroek, L., Noguchi, H., Parac-Vogt, T.N., Van Meervelt, L., Voet, A.R.D.
PDB entry 6y7o: The complex between the eight-bladed symmetrical designer protein Tako8 and the silicotungstic acid Keggin (STA)
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-03-02
Authors: Vandebroek, L., Noguchi, H., Parac-Vogt, T.N., Van Meervelt, L., Voet, A.R.D.
PDB entry 6y7p: The complex between the eight-bladed symmetrical designer protein Tako8 and 1:2 zirconium(IV) Wells-Dawson (ZrWD)
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-03-02
Authors: Vandebroek, L., Noguchi, H., Parac-Vogt, T.N., Van Meervelt, L., Voet, A.R.D.
PDB entry 6y7q: Crystal Structure of the N-terminal PAS domain from the hERG3 Potassium Channel
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2020-03-02
Authors: Cresser-Brown, J., Raven, E., Moody, P.
PDB entry 6y7r: Structure of Chloroflexus aggregans Cagg_3753 LOV domain C85A A56P variant (CagFbFP)
Classification: FLUORESCENT PROTEIN
Source organism: Chloroflexus aggregans (strain MD-66 / DSM 9485)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-03-02
Authors: Remeeva, A., Nazarenko, V., Kovalev, K., Gordeliy, V., Gushchin, I.
PDB entry 6y7s: 2.85 A cryo-EM structure of the in vivo assembled type 1 pilus rod
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2020-03-02
Authors: Zyla, D., Hospenthal, M., Waksman, G., Glockshuber, R.
PDB entry 6y7t: Engineered conjugation of lysine-specific molecular tweezers with ExoS derived peptidic inhibitor enhance affinity towards target protein 14-3-3 through ditopic binding
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-03-02
Authors: Guillory, X., Ottmann, C.
PDB entry 6y7u: Structure of Chloroflexus aggregans Cagg_3753 LOV domain C85A A95P variant (CagFbFP)
Classification: FLUORESCENT PROTEIN
Source organism: Chloroflexus aggregans (strain MD-66 / DSM 9485)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-03-02
Authors: Remeeva, A., Nazarenko, V., Kovalev, K., Gordeliy, V., Gushchin, I.
PDB entry 6y7v: Crystal structure of the KDEL receptor bound to HDEL peptide at pH 6.0
Classification: MEMBRANE PROTEIN
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.241 Å
Deposited: 2020-03-02
Authors: Braeuer, P., Newstead, S.
PDB entry 6y7w: Fragment KCL_1337 in complex with MAP kinase p38-alpha
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2020-03-02
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y7x: Fragment KCL_771 in complex with MAP kinase p38-alpha
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-03-02
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y7y: Fragments KCL_771 and KCL_802 in complex with MAP kinase p38-alpha
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2020-03-02
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y7z: Fragment KCL_914 in complex with MAP kinase p38-alpha
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2020-03-02
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y80: Fragment KCL_916 in complex with MAP kinase p38-alpha
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2020-03-02
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y81: Fragment KCL_1088 in complex with MAP kinase p38-alpha
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2020-03-03
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y82: Fragment KCL_804 in complex with MAP kinase p38-alpha
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2020-03-03
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y83: Capsid structure of Leishmania RNA virus 1
Classification: VIRUS LIKE PARTICLE
Source organism: Leishmania RNA virus 1 - 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2020-03-03
Authors: Prochazkova, M., Fuzik, T., Grybtchuk, D., Falginella, F., Podesvova, L., Yurchenko, V., Vacha, R., Plevka, P.
PDB entry 6y84: SARS-CoV-2 main protease with unliganded active site (2019-nCoV, coronavirus disease 2019, COVID-19)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2020-03-03
Authors: Owen, C.D., Lukacik, P., Strain-Damerell, C.M., Douangamath, A., Powell, A.J., Fearon, D., Brandao-Neto, J., Crawshaw, A.D., Aragao, D., Williams, M., Flaig, R., Hall, D.R., McAuley, K.E., Mazzorana, M., Stuart, D.I., von Delft, F., Walsh, M.A.
PDB entry 6y85: Fragment KCL_1410 in complex with MAP kinase p38-alpha
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-03-03
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y86: Active YidC insertase crystal structure with the first transmembrane domain resolved
Classification: MEMBRANE PROTEIN
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2020-03-03
Authors: Li, X.D., Nass, K.
PDB entry 6y87: Crystal Structure of the Homospermidine Synthase (HSS) from Pseudomonas aeruginosa in Complex with NAD and PUT
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-03-03
Authors: Helfrich, F., Scheidig, A.J.
PDB entry 6y88: IGPS (Indole-3-glycerol phosphate synthase) from Pseudomonas aeruginosa in complex with substrate inhibitor rCdRP
Classification: LYASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09983 Å
Deposited: 2020-03-03
Authors: Soderholm, A., Selmer, M.
PDB entry 6y89: Crystal structure of the cAMP-dependent protein kinase A cocrystallized with Methyl 5-isoquinolinecarboxylate and PKI (5-24)
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2020-03-04
Authors: Oebbeke, M., Gerber, H.-D., Heine, A., Klebe, G.
PDB entry 6y8a: 14-3-3 Sigma in complex with phosphorylated camkk2{pS511} peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-03-04
Authors: Ballone, A., Lau, R.A., Zweipfenning, F.P.A., Ottmann, C.
PDB entry 6y8b: 14-3-3 Sigma in complex with phosphorylated caspase{pS139} peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2020-03-04
Authors: Ballone, A., Lau, R.A., Zweipfenning, F.P.A., Ottmann, C.
PDB entry 6y8c: Crystal structure of the cAMP-dependent protein kinase A cocrystallized with ATP and PKI (5-24)
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2020-03-04
Authors: Oebbeke, M., Heine, A., Klebe, G.
PDB entry 6y8d: 14-3-3 Sigma in complex with phosphorylated caspase{pS164} peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2020-03-04
Authors: Ballone, A., Lau, R.A., Zweipfenning, F.P.A., Ottmann, C.
PDB entry 6y8e: 14-3-3 Sigma in complex with phosphorylated MLF1 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2020-03-04
Authors: Ballone, A., Lau, R.A., Zweipfenning, F.P.A., Ottmann, C.
PDB entry 6y8f: An inactive (D136N and D137N) variant of alpha-1,6-mannanase, GH76A of Salegentibacter sp. HEL1_6 in complex with alpha-1,6-mannotriose
Classification: HYDROLASE
Source organism: Salegentibacter sp. Hel_I_6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.472 Å
Deposited: 2020-03-04
Authors: Hehemann, J.H., Solanki, V.A.
PDB entry 6y8g: selenomethionine derivative of ferulic acid esterase (FAE)
Classification: HYDROLASE
Source organism: Hungateiclostridium thermocellum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-03-04
Authors: von Stetten, D., Mueller-Dieckmann, C., Carpentier, P., Flot, D.
PDB entry 6y8h: Novel p38-alpha crystal lattice with highly exposed p38/TAB1 non-canonical PPI surface.
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2020-03-05
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y8i: Fragment KCL_I013 in complex with IL-1-beta
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2020-03-05
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y8j: Crystal structure of the apo form of a quaternary ammonium Rieske monooxygenase CntA
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-03-05
Authors: Quareshy, M., Shanmugam, M., Bugg, T.D., Cameron, A., Chen, Y.
PDB entry 6y8k: Crystal structure of CD137 in complex with the cyclic peptide BCY10916
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.011 Å
Deposited: 2020-03-05
Authors: Upadhyaya, P., Kublin, J., Dods, R., Kristensson, J., Lahdenranta, J., Kleyman, M., Repash, E., Ma, J., Mudd, G., Van Rietschoten, K., Haines, E., Harrison, H., Beswick, P., Chen, L., McDonnell, K., Battula, S., Hurov, K., Keen, N.
PDB entry 6y8l: Mycobacterium thermoresistibile GyrB21 in complex with novobiocin
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium thermoresistibile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-03-05
Authors: Henderson, S.R., Stevenson, C.E.M., Malone, B., Zholnerovych, Y., Mitchenall, L.A., Pichowicz, M., McGarry, D.H., Cooper, I.R., Charrier, C., Salisbury, A., Lawson, D.M., Maxwell, A.
PDB entry 6y8m: Fragment bikinin bound to Interleukin 1 beta
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-03-05
Authors: De Nicola, G.F., Nichols, C.E.
PDB entry 6y8n: Mycobacterium thermoresistibile GyrB21 in complex with Redx03863
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium thermoresistibile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-03-05
Authors: Henderson, S.R., Stevenson, C.E.M., Malone, B., Zholnerovych, Y., Mitchenall, L.A., Pichowicz, M., McGarry, D.H., Cooper, I.R., Charrier, C., Salisbury, A., Lawson, D.M., Maxwell, A.
PDB entry 6y8o: Mycobacterium smegmatis GyrB 22kDa ATPase sub-domain in complex with novobiocin
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-03-05
Authors: Henderson, S.R., Stevenson, C.E.M., Malone, B., Zholnerovych, Y., Mitchenall, L.A., Pichowicz, M., McGarry, D.H., Cooper, I.R., Charrier, C., Salisbury, A., Lawson, D.M., Maxwell, A.
PDB entry 6y8p: Crystal structure of SNAP-tag labeled with a benzyl-tetramethylrhodamine fluorophore
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-03-05
Authors: Gotthard, G., Tanzer, T., Johnsson, K., Hiblot, J.
PDB entry 6y8q: AbiEi antitoxin from Streptococcus agalactiae
Classification: ANTITOXIN
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-03-05
Authors: Blower, T.R., Beck, I.N.
PDB entry 6y8s: Crystal structure of the quaternary ammonium Rieske monooxygenase CntA in complex with substrate gamma-butyrobetaine
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.629 Å
Deposited: 2020-03-05
Authors: Quareshy, M., Shanmugam, M., Bugg, T.D., Cameron, A., Chen, Y.
PDB entry 6y8v: Rhodospirillum rubrum oxidized CooT solution structure
Classification: METAL BINDING PROTEIN
Source organism: Rhodospirillum rubrum
Experimental method: SOLUTION NMR
Deposited: 2020-03-05
Authors: Chagot, B.
PDB entry 6y8w: Rhodospirillum rubrum reduced CooT solution structure
Classification: METAL BINDING PROTEIN
Source organism: Rhodospirillum rubrum
Experimental method: SOLUTION NMR
Deposited: 2020-03-05
Authors: Chagot, B.
PDB entry 6y8x: Structure of Atlantic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5)
Classification: ISOMERASE
Source organism: Clupea harengus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-03-06
Authors: Gustafsson, R., Eckhard, U., Selmer, M.
PDB entry 6y8y: Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5) with bound Glucose-1-Phosphate
Classification: ISOMERASE
Source organism: Clupea harengus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-03-06
Authors: Gustafsson, R., Eckhard, U., Selmer, M.
PDB entry 6y8z: Structure of Baltic Herring (Clupea Harengus) Phosphoglucomutase 5 (PGM5)
Classification: ISOMERASE
Source organism: Clupea harengus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-03-06
Authors: Gustafsson, R., Eckhard, U., Selmer, M.
PDB entry 6y90: Structure of full-length CD20 in complex with Rituximab Fab
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2020-03-06
Authors: Kumar, A., Reyes, N.
PDB entry 6y91: Crystal structure of malate dehydrogenase from Plasmodium Falciparum in complex with NADH
Classification: OXIDOREDUCTASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-03-06
Authors: Romero, A.R., Calderone, V., Gentili, M., Lunev, S., Groves, M., Popowicz, G., Domling, A., Sattler, M.
PDB entry 6y92: Structure of full-length CD20 in complex with Ofatumumab Fab
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.73 Å
Deposited: 2020-03-06
Authors: Kumar, A., Reyes, N.
PDB entry 6y93: Crystal structure of the DNA-binding domain of the Nucleoid Occlusion Factor (Noc) complexed to the Noc-binding site (NBS)
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis (strain 168); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2020-03-06
Authors: Jalal, A.S.B., Tran, N.T., Stevenson, C.E.M., Chan, E., Lo, R., Tan, X., Noy, A., Lawson, D.M., Le, T.B.K.
PDB entry 6y94: Ca2+-bound Calmodulin mutant N53I
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-03-06
Authors: Holt, C., Nielsen, L.H., Lau, K., Brohus, M., Sorensen, A.B., Larsen, K.T., Sommer, C., Petegem, F.V., Overgaard, M.T., Wimmer, R.
PDB entry 6y95: Ca2+-free Calmodulin mutant N53I
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-03-06
Authors: Holt, C., Hamborg, L.N., Lau, K., Brohus, M., Sorensen, A.B., Larsen, K.T., Sommer, C., Petegem, F.V., Overgaard, M.T., Wimmer, R.
PDB entry 6y96: solution structure of cold-shock domain 9 of drosophila Upstream of N-Ras (Unr)
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: SOLUTION NMR
Deposited: 2020-03-06
Authors: Sweetapple, L.J., Hollmann, N.M., Simon, B., Hennig, J.
PDB entry 6y97: Structure of full-length CD20 in complex with Obinutuzumab Fab
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.33 Å
Deposited: 2020-03-06
Authors: Kumar, A., Reyes, N.
PDB entry 6y98: Crystal Structure of subtype-switched Epithelial Adhesin 9 to 1 A domain (Epa9-CBL2Epa1) from Candida glabrata in complex with beta-lactose
Classification: CELL ADHESION
Source organism: Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-03-06
Authors: Hoffmann, D., Diderrich, R., Kock, M., Friederichs, S., Reithofer, V., Essen, L.-O., Moesch, H.-U.
PDB entry 6y99: hSTING mutant R232K in complex with 2',3'-cGAMP
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.984 Å
Deposited: 2020-03-06
Authors: Boura, E., Smola, M.
PDB entry 6y9a: Structure of full-length CD20 in complex with Obinutuzumab Fab
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-03-06
Authors: Kumar, A., Reyes, N.
PDB entry 6y9b: Cryo-EM structure of trimeric human STEAP1 bound to three Fab120.545 fragments
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2020-03-06
Authors: Oosterheert, W., Gros, P.
PDB entry 6y9c: The structure of a quaternary ammonium Rieske monooxygenase reveals insights into carnitine oxidation by gut microbiota and inter-subunit electron transfer
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-03-06
Authors: Quareshy, M., Shanmugam, M., Bugg, T.D., Cameron, A., Chen, Y.
PDB entry 6y9d: Crystal structure of the quaternary ammonium Rieske monooxygenase CntA in complex with substrate L-Carnitine
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2020-03-06
Authors: Quareshy, M., Shanmugam, M., Bugg, T.D., Cameron, A., Chen, Y.
PDB entry 6y9e: Crystal structure of putative ancestral haloalkane dehalogenase AncHLD2 (node 2)
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-03-09
Authors: Chaloupkova, R., Damborsky, J., Marek, M.
PDB entry 6y9f: Crystal structure of putative ancestral haloalkane dehalogenase AncHLD3 (node 3)
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2020-03-09
Authors: Chaloupkova, R., Damborsky, J., Marek, M.
PDB entry 6y9g: Crystal structure of putative ancestral haloalkane dehalogenase AncHLD5 (node 5)
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.748 Å
Deposited: 2020-03-09
Authors: Chaloupkova, R., Damborsky, J., Marek, M.
PDB entry 6y9h: Thrombin in complex with D-Phe-Pro-m-Trifluoromethylbenzylamide derivative (phe2)
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2020-03-09
Authors: Sandner, A., Heine, A., Klebe, G., Abazi, N.
PDB entry 6y9i: Structure of apo Chimpanzee Polyomavirus VP1
Classification: VIRAL PROTEIN
Source organism: Chimpanzee polyomavirus Bob
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-03-09
Authors: Stroh, L.J., Rustmeier, N.H., Stehle, T.
PDB entry 6y9j: Crystal Structure of subtype-switched Epithelial Adhesin 1 to 9 A domain (Epa1-CBL2Epa9) from Candida glabrata in complex with beta-lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Candida glabrata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2020-03-09
Authors: Hoffmann, D., Diderrich, R., Kock, M., Friederichs, S., Reithofer, V., Essen, L.-O., Moesch, H.-U.
PDB entry 6y9k: Esterase EST8 with transacylase activity
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.298 Å
Deposited: 2020-03-09
Authors: Palm, G.J., Lammers, M., Berndt, L.
PDB entry 6y9l: Crystal structure of TSWV glycoprotein N ectodomain (sGn)
Classification: VIRAL PROTEIN
Source organism: Tomato spotted wilt virus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.1 Å
Deposited: 2020-03-09
Authors: Dessau, M., Bahat, Y.
PDB entry 6y9m: Crystal structure of TSWV glycoprotein N ectodomain (sGn)
Classification: VIRAL PROTEIN
Source organism: Tomato spotted wilt virus (strain Brazilian BR-01)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2020-03-10
Authors: Dessau, M., Bahat, Y.
PDB entry 6y9n: Crystal structure of Whirlin PDZ3_C-ter in complex with Myosin 15a C-terminal PDZ binding motif peptide
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2020-03-10
Authors: Zhu, Y., Delhommel, F., Haouz, A., Caillet-Saguy, C., Vaney, M., Mechaly, A.E., Wolff, N.
PDB entry 6y9o: Crystal structure of Whirlin PDZ3_C-ter in complex with CASK internal PDZ binding motif peptide
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.632 Å
Deposited: 2020-03-10
Authors: Zhu, Y., Delhommel, F., Haouz, A., Caillet-Saguy, C., Vaney, M., Mechaly, A.E., Wolff, N.
PDB entry 6y9p: Crystal structure of Whirlin PDZ3_C-ter in complex with Harmonin a1 C-terminal PDZ binding motif peptide
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.169 Å
Deposited: 2020-03-10
Authors: Zhu, Y., Delhommel, F., Haouz, A., Caillet-Saguy, C., Vaney, M., Mechaly, A.E., Wolff, N.
PDB entry 6y9q: Crystal structure of Whirlin PDZ3_C-ter in complex with Taperin internal PDZ binding motif peptide
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.315 Å
Deposited: 2020-03-10
Authors: Zhu, Y., Delhommel, F., Haouz, A., Caillet-Saguy, C., Vaney, M., Mechaly, A.E., Wolff, N.
PDB entry 6y9r: Crystal structure of GSK-3b in complex with the 1H-indazole-3-carboxamide inhibitor 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2020-03-10
Authors: Krapp, S., Griessner, A., Blaesse, M., Buonfiglio, R., Ombrato, R.
PDB entry 6y9s: Crystal structure of GSK-3b in complex with the imidazo[1,5-a]pyridine-3-carboxamide inhibitor 16
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2020-03-10
Authors: Krapp, S., Griessner, A., Blaesse, M., Buonfiglio, R., Ombrato, R.
PDB entry 6y9t: Family GH13_31 enzyme
Classification: HYDROLASE
Source organism: Lactobacillus acidophilus NCFM
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2020-03-10
Authors: Andersen, S., Poulsen, J.C.N., Moeller, M.S., Abou Hachem, M., Lo Leggio, L.
PDB entry 6y9u: Crystal structure of PnrA from S. pneumoniae in complex with adenosine
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-03-10
Authors: Batuecas, M.T., Hermoso, J.A.
PDB entry 6y9v: Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-8,13)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.9 Å
Deposited: 2020-03-10
Authors: Ni, T., Gerard, S., Zhao, G., Ning, J., Zhang, P.
PDB entry 6y9w: Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,8)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-03-10
Authors: Ni, T., Gerard, S., Zhao, G., Ning, J., Zhang, P.
PDB entry 6y9x: Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,7)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2020-03-10
Authors: Ni, T., Gerard, S., Zhao, G., Ning, J., Zhang, P.
PDB entry 6y9y: Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-7,13)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2020-03-10
Authors: Ni, T., Gerard, S., Zhao, G., Ning, J., Zhang, P.
PDB entry 6y9z: Structure of the native full-length HIV-1 capsid protein in complex with Cyclophilin A from helical assembly (-13,9)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2020-03-10
Authors: Ni, T., Gerard, S., Zhao, G., Ning, J., Zhang, P.
PDB entry 6ya0: Crystal structure of TSWV glycoprotein N ectodomain (Trypsin treated)
Classification: VIRAL PROTEIN
Source organism: Tomato spotted wilt virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2020-03-11
Authors: Dessau, M., Bahat, Y.
PDB entry 6ya1: Zinc metalloprotease ProA
Classification: METAL BINDING PROTEIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2020-03-11
Authors: Schmelz, S., Blankenfeldt, W.
PDB entry 6ya2: Crystal structure of TSWV glycoprotein N ectodomain (Trypsin treated)
Classification: VIRAL PROTEIN
Source organism: Tomato spotted wilt virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-03-11
Authors: Dessau, M., Bahat, Y.
PDB entry 6ya3: Crystal structure of PnrA from S. pneumoniae in complex with guanosine
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2020-03-11
Authors: Batuecas, M.T., Hermoso, J.A.
PDB entry 6ya4: Crystal structure of PnrA from S. pneumoniae in complex with cytidine
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-03-11
Authors: Batuecas, M.T., Hermoso, J.A.
PDB entry 6ya5: 2009 H1N1 PA Endonuclease in complex with LU2
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/California/07/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-03-11
Authors: Radilova, K., Brynda, J.
PDB entry 6ya6: Minimal construct of Cdc7-Dbf4 bound to XL413
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2020-03-11
Authors: Dick, S.D., Cherepanov, P.
PDB entry 6ya7: Cdc7-Dbf4 bound to an Mcm2-S40 derived bivalent substrate
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2020-03-11
Authors: Dick, S.D., Cherepanov, P.
PDB entry 6ya8: Cdc7-Dbf4 bound to ADP-BeF3
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2020-03-11
Authors: Dick, S.D., Cherepanov, P.
PDB entry 6ya9: Crystal structure of rsGCaMP in the ON state (non-illuminated)
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-03-11
Authors: Janowski, R., Fuenzalida-Werner, J.P., Mishra, K., Stiel, A.C., Niessing, D.
PDB entry 6yaa: Structure of the (SR) Ca2+-ATPase bound to the inhibitor compound CAD204520 and TNP-ATP
Classification: HYDROLASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2020-03-11
Authors: Heit, S., Marchesini, M., Gherli, A., Montanaro, A., Patrizi, L., Sorrentino, C., Pagliaro, L., Rompietti, C., Kitara, S., Olesen, C.E., Moller, J.V., Savi, M., Bocchi, L., Vilella, R., Rizzi, F., Baglione, M., Rastelli, G., Loiacona, C., La Starza, R., Mecucci, C., Stegmair, K., Aversa, F., Stilli, D., Lund Winther, A.M., Sportoletti, P., Dalby-Brown, W., Roti, G., Bublitz, M.
PDB entry 6yab: Crystal structure of PnrA from S. pneumoniae in complex with uridine
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-03-12
Authors: Batuecas, M.T., Hermoso, J.A.
PDB entry 6yac: Plant PSI-ferredoxin supercomplex
Classification: PHOTOSYNTHESIS
Source organism: Pisum sativum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2020-03-12
Authors: Caspy, I., Nelson, N., Shkolnisky, Y., Klaiman, D., Sheinker, A.
PDB entry 6yae: AP2 core in physiological buffer
Classification: ENDOCYTOSIS
Source organism: Homo sapiens; Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-03-12
Authors: Kane Dickson, V., Kovtun, O., Kelly, B.T., Owen, D.J., Briggs, J.A.G.
PDB entry 6yaf: AP2 on a membrane containing tyrosine-based cargo peptide
Classification: ENDOCYTOSIS
Source organism: Homo sapiens; Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.1 Å
Deposited: 2020-03-12
Authors: Kovtun, O., Kane Dickson, V., Kelly, B.T., Owen, D., Briggs, J.A.G.
PDB entry 6yag: Crystal structure of PnrA from S. pneumoniae in complex with thymidine
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-03-12
Authors: Batuecas, M.T., Hermoso, J.A.
PDB entry 6yah: AP2 in clathrin coats assembled on a membrane containing dileucine- and tyrosine-based cargo peptides
Classification: ENDOCYTOSIS
Source organism: Homo sapiens; Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 10.2 Å
Deposited: 2020-03-12
Authors: Kovtun, O., Kane Dickson, V., Kelly, B.T., Owen, D., Briggs, J.A.G.
PDB entry 6yai: Clathrin with bound beta2 appendage of AP2
Classification: ENDOCYTOSIS
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.2 Å
Deposited: 2020-03-12
Authors: Kovtun, O., Kane Dickson, V., Kelly, B.T., Owen, D., Briggs, J.A.G.
PDB entry 6yaj: Split gene transketolase, inactive beta4 tetramer
Classification: TRANSFERASE
Source organism: Carboxydothermus hydrogenoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-03-12
Authors: Isupov, M.N., Littlechild, J.A., James, P.
PDB entry 6yak: Split gene transketolase, active alpha2beta2 heterotetramer
Classification: TRANSFERASE
Source organism: Carboxydothermus hydrogenoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2020-03-12
Authors: Isupov, M.N., Littlechild, J.A., James, P.
PDB entry 6yal: Mammalian 48S late-stage initiation complex with beta-globin mRNA
Classification: TRANSLATION
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-03-12
Authors: Bochler, A., Simonetti, A., Guca, E., Hashem, Y.
PDB entry 6yam: Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA
Classification: TRANSLATION
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-03-12
Authors: Bochler, A., Simonetti, A., Guca, E., Hashem, Y.
PDB entry 6yan: Mammalian 48S late-stage translation initiation complex with histone 4 mRNA
Classification: TRANSLATION
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2020-03-12
Authors: Bochler, A., Simonetti, A., Guca, E., Hashem, Y.
PDB entry 6yao: Crystal structure of ZmCKO4a in complex with inhibitor 1-[2-(2-Hydroxy-ethyl)-phenyl]-3-(3-trifluoromethoxy-phenyl)-urea
Classification: FLAVOPROTEIN
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-03-12
Authors: Kopecny, D., Briozzo, P., Morera, S.
PDB entry 6yap: Crystal structure of ZmCKO4a in complex with inhibitor 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea
Classification: FLAVOPROTEIN
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-03-12
Authors: Kopecny, D., Briozzo, P., Morera, S.
PDB entry 6yaq: Crystal sttructure of ZmCKO8 in complex with inhibitor 1-(3-Chloro-5-trifluoromethoxy-phenyl)-3-[2-(2-hydroxy-ethyl)-phenyl]-urea
Classification: FLAVOPROTEIN
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-03-12
Authors: Kopecny, D., Briozzo, P., Morera, S.
PDB entry 6yar: Crystal structure of a Selenium-derivatized complex of the bacterial cellulose secretion regulators BcsR and BcsQ, crystallized in the presence of AppCp
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-03-12
Authors: Caleechurn, M., Abidi, W., Zouhir, S., Roche, S., Krasteva, P.V.
PDB entry 6yas: HYDROXYNITRILE LYASE FROM HEVEA BRASILIENSIS, ROOM TEMPERATURE STRUCTURE
Classification: LYASE
Source organism: Hevea brasiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1999-03-15
Authors: Zuegg, J., Wagner, U.G., Gugganig, M., Kratky, C.
PDB entry 6yat: Crystal structure of STK4 (MST1) in complex with compound 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2020-03-13
Authors: Chaikuad, A., Bata, N., Limpert, A.S., Lambert, L.J., Bakas, N.A., Cosford, N.D.P., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yau: CRYSTAL STRUCTURE OF ASGPR 1 IN COMPLEX WITH GN-A.
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.397 Å
Deposited: 2020-03-13
Authors: Schreuder, H.A., Liesum, A.
PDB entry 6yav: Structure of FeSII (Shethna) protein from Azotobacter vinelandii
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-03-13
Authors: Kabasakal, B.V., Kung, W.K.A., Cotton, C.A.R., Lieber, L., McFarlane, C.R., Murray, J.W.
PDB entry 6yaw: Crystal structure of human GSTA1-1 bound to the glutathione adduct of cinnamaldehyde
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2020-03-13
Authors: Schwartz, M., Neiers, F.
PDB entry 6yax: Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (5C05)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-03-14
Authors: Fisher, H., Tews, I., Orr, C.
PDB entry 6yay: Crystal structure of a Selenium-derivatized complex of the bacterial cellulose secretion regulators BcsR and BcsQ, crystallized in the presence of ADP
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2020-03-14
Authors: Abidi, W., Caleechurn, M., Zouhir, S., Roche, S., Krasteva, P.V.
PDB entry 6yaz: Crystal structure of a parallel hexameric coiled coil CC-Type2-(TaId)5
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2020-03-15
Authors: Scott, A.J., Brady, R.L., Woolfson, D.N.
PDB entry 6yb0: Crystal structure of a parallel hexameric coiled coil CC-Type2-(TaSd)2
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2020-03-15
Authors: Scott, A.J., Brady, R.L., Woolfson, D.N.
PDB entry 6yb1: Crystal structure of an antiparallel octameric transmembrane coiled coil K2-CCTM-VbIc
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-03-15
Authors: Kratochvil, H.T., Liu, L., Scott, A.J., Woolfson, D.N., DeGrado, W.F.
PDB entry 6yb2: Crystal structure of a parallel hexameric coiled coil CC-Type2-(TaId)2
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2020-03-15
Authors: Scott, A.J., Brady, R.L., Woolfson, D.N.
PDB entry 6yb3: Crystal structure of a native BcsRQ complex purified and crystallized in the absence of nucleotide
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2020-03-15
Authors: Caleechurn, M., Abidi, W., Zouhir, S., Roche, S., Krasteva, P.V.
PDB entry 6yb4: Crystal structure of human ATAD2 bromodomain in complex with N-(4-bromo-3-(3-methylpyrrolidin-1-yl)sulfonyl)phenyl)-2-(-4-cyclopropyl-4-methyl-2,5-dioxoimidazolidin-1-yl)acetamide
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-03-15
Authors: Chung, C.
PDB entry 6yb5: Orthorhombic crystal structure of a native BcsRQ complex crystallized in the presence of ADP
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2020-03-15
Authors: Caleechurn, M., Abidi, W., Zouhir, S., Roche, S., Krasteva, P.V.
PDB entry 6yb6: Thrombin in complex with D-Phe-Pro-3-chloro-1,3-dihydroxybenzylamide derivative (13c)
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2020-03-16
Authors: Sandner, A., Heine, A., Klebe, G., Abazi, N.
PDB entry 6yb7: SARS-CoV-2 main protease with unliganded active site (2019-nCoV, coronavirus disease 2019, COVID-19).
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-03-16
Authors: Owen, C.D., Lukacik, P., Strain-Damerell, C.M., Douangamath, A., Powell, A.J., Fearon, D., Brandao-Neto, J., Crawshaw, A.D., Aragao, D., Williams, M., Flaig, R., Hall, D.R., McAuley, K.E., Mazzorana, M., Stuart, D.I., von Delft, F., Walsh, M.A.
PDB entry 6yb8: Human octameric PAICS in complex with CAIR and SAICAR
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2020-03-16
Authors: Skerlova, J., Unterlass, J., Gottmann, M., Homan, E., Helleday, T., Jemth, A.S., Stenmark, P.
PDB entry 6yb9: Human octameric PAICS in complex with SAICAR, AMP-PNP, and magnesium
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.406 Å
Deposited: 2020-03-16
Authors: Skerlova, J., Unterlass, J., Gottmann, M., Homan, E., Helleday, T., Jemth, A.S., Stenmark, P.