LiteFold/PDB huggingface dataset:
PDB entry 7cwf: Crystal structure of PDE8A catalytic domain in complex with 2c
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-08-28
Authors: Huang, Y., Wu, X.-N., Zhou, Q., Wu, Y., Luo, H.-B.
PDB entry 7cwg: Crystal structure of PDE8A catalytic domain in complex with 3a
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-08-28
Authors: Huang, Y., Wu, X.-N., Zhou, Q., Wu, Y., Luo, H.-B.
PDB entry 7cwh: Structural basis of RACK7 PHD to read a pediatric glioblastoma-associated histone mutation H3.3G34R
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2020-08-28
Authors: Lan, W.X., Li, Z., Jiao, F.F., Wang, C.X., Guo, R., Cao, C.Y.
PDB entry 7cwi: Crystal structure of beta-galactosidase II from Bacillus circulans
Classification: HYDROLASE
Source organism: Bacillus circulans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-08-28
Authors: Hong, H., Seo, H.
PDB entry 7cwj: Root induced Secreted protein Tsp1 from Biocontrol fungi Trichoderma virens
Classification: SIGNALING PROTEIN
Source organism: Hypocrea virens (strain Gv29-8 / FGSC 10586)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2020-08-28
Authors: Gupta, G.D.
PDB entry 7cwk: Structure of a triple-helix region of human collagen type I
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.539 Å
Deposited: 2020-08-29
Authors: Zhu, Y., Yang, X., Sun, F.
PDB entry 7cwl: SARS-CoV-2 spike protein and P17 fab complex with one RBD in close state
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-08-29
Authors: Wang, X., Wang, N.
PDB entry 7cwm: Complex of SARS-CoV-2 spike protein and Fab P17 with one RBD in open state and two RBD in closed state
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-08-29
Authors: Wang, N., Wang, X.
PDB entry 7cwn: P17-H014 Fab cocktail in complex with SARS-CoV-2 spike protein
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-08-29
Authors: Wang, N., Wang, X.
PDB entry 7cwo: SARS-CoV-2 spike protein RBD and P17 fab complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-08-29
Authors: Wang, X., Wang, N.
PDB entry 7cwp: Root induced Secreted protein Tsp1 from Biocontrol fungi Trichoderma virens
Classification: SIGNALING PROTEIN
Source organism: Hypocrea virens (strain Gv29-8 / FGSC 10586)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-08-29
Authors: Gupta, G.D.
PDB entry 7cwq: Crystal structure of a novel cutinase from Burkhoderiales bacterium RIFCSPLOWO2_02_FULL_57_36
Classification: HYDROLASE
Source organism: Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-08-30
Authors: Han, X., Liu, W.D., Zheng, Y.Y., Chen, C.C., Guo, R.T.
PDB entry 7cws: SARS-CoV-2 Spike Proteins Trimer in Complex with FC05 and H014 Fabs Cocktail
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-08-31
Authors: Wang, L., Wang, X.
PDB entry 7cwt: SARS-CoV-2 Spike protein in complex with hb27 and fc05 Fab cocktail
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-08-31
Authors: Cui, Z., Wang, X.
PDB entry 7cwu: SARS-CoV-2 spike proteins trimer in complex with P17 and FC05 Fabs cocktail
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-08-31
Authors: Wang, X., Wang, N.
PDB entry 7cwv: Crystal structure of Arabinose isomerase from hyper thermophilic bacterium Thermotoga maritima (TMAI) wt
Classification: ISOMERASE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.53 Å
Deposited: 2020-08-31
Authors: Hoang, N.K.Q., Dhanasingh, I., Cao, T.P., Sung, J.Y., Shin, S.M., Lee, D.W., Lee, S.H.
PDB entry 7cww: Crystal structure of TsrL
Classification: ANTIBIOTIC
Source organism: Streptomyces laurentii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-08-31
Authors: Li, Y., Pan, L.F.
PDB entry 7cwx: Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis
Classification: LYASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-09-01
Authors: Yu, X., Gong, M., Huang, J., Liu, W., Chen, C., Guo, R.
PDB entry 7cwy: Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP
Classification: LYASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2020-09-01
Authors: Yu, X., Gong, M., Huang, J., Liu, W., Chen, C., Guo, R.
PDB entry 7cwz: Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis K392A mutant in complex with the cofactor PLP and L-dopa
Classification: LYASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2020-09-01
Authors: Yu, X., Gong, M., Huang, J., Liu, W., Chen, C., Guo, R.
PDB entry 7cx0: Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor carbidopa
Classification: LYASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2020-09-01
Authors: Yu, X., Gong, M., Huang, J., Liu, W., Chen, C., Guo, R.
PDB entry 7cx1: Crystal structure of a tyrosine decarboxylase from Enterococcus faecalis in complex with the cofactor PLP and inhibitor methyl-tyrosine
Classification: LYASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2020-09-01
Authors: Yu, X., Gong, M., Huang, J., Liu, W., Chen, C., Guo, R.
PDB entry 7cx2: Cryo-EM structure of the PGE2-bound EP2-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-09-01
Authors: Qu, C., Mao, C., Xiao, P., Shen, Q., Zhong, Y., Yang, F., Shen, D., Tao, X., Zhang, H., Yan, X., Zhao, R., He, J., Guan, Y., Zhang, C., Hou, G., Zhang, P., Yu, X., Guan, Y., Sun, J., Zhang, Y.
PDB entry 7cx3: Cryo-EM structure of the Taprenepag-bound EP2-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-09-01
Authors: Qu, C., Mao, C., Xiao, P., Shen, Q., Zhong, Y., Yang, F., Shen, D., Tao, X., Zhang, H., Yan, X., Zhao, R., He, J., Guan, Y., Zhang, C., Hou, G., Zhang, P., Yu, X., Guan, Y., Sun, J., Zhang, Y.
PDB entry 7cx4: Cryo-EM structure of the Evatanepag-bound EP2-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-09-01
Authors: Qu, C., Mao, C., Xiao, P., Shen, Q., Zhong, Y., Yang, F., Shen, D., Tao, X., Zhang, H., Yan, X., Zhao, R., He, J., Guan, Y., Zhang, C., Hou, G., Zhang, P., Yu, X., Guan, Y., Sun, J., Zhang, Y.
PDB entry 7cx5: Crystal structure of the DNA-binding domain of Bacillus subtilis CssR
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2020-09-01
Authors: Dahal, P., Kim, D.Y., Kwon, E.
PDB entry 7cx6: Structure of the CYP102A1 Haem Domain with N-(5-Cyclohexyl)valeroyl-L-Phenylalanine in complex with (R)-(+)-1-Phenylethylamine
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2020-09-01
Authors: Stanfield, J.K., Sugimoto, H., Shoji, O.
PDB entry 7cx7: Crystal structure of Arabinose isomerase from hybrid AI8
Classification: ISOMERASE
Source organism: Alicyclobacillus acidocaldarius; Alicyclobacillus sp. TP-7; Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2020-09-01
Authors: Hoang, N.K.Q., Dhanasingh, I., Cao, T.P., Sung, J.Y., Shin, S.M., Lee, D.W., Lee, S.H.
PDB entry 7cx8: Structure of the CYP102A1 Haem Domain with N-(5-Cyclohexyl)valeroyl-L-Phenylalanine in complex with (R)-1-Tetralylamine
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-09-01
Authors: Stanfield, J.K., Sugimoto, H., Shoji, O.
PDB entry 7cx9: Crystal structure of the SARS-CoV-2 main protease in complex with INZ-1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2020-09-01
Authors: Zeng, R., Liu, X.L., Qiao, J.X., Nan, J.S., Wang, Y.F., Li, Y.S., Yang, S.Y., Lei, J.
PDB entry 7cxa: Structure of human Galectin-3 CRD in complex with TD-139 belonging to P31 space group.
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2020-09-01
Authors: Kumar, A.
PDB entry 7cxb: Structure of mouse Galectin-3 CRD in complex with TD-139 belonging to P6522 space group.
Classification: SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2020-09-01
Authors: Kumar, A.
PDB entry 7cxc: Structure of mouse Galectin-3 CRD point mutant (V160A) in complex with TD-139 belonging to P121 space group.
Classification: SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-09-01
Authors: Kumar, A.
PDB entry 7cxd: Xray structure of rat Galectin-3 CRD in complex with TD-139 belonging to P121 space group
Classification: SUGAR BINDING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2020-09-01
Authors: Kumar, A.
PDB entry 7cxe: The ligand-free structure of human PPARgamma LBD R280C mutant
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-09-01
Authors: Jang, D.M., Han, B.W.
PDB entry 7cxf: The ligand-free structure of human PPARgamma LBD C285Y mutant in the presence of the SRC-1 coactivator peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-09-01
Authors: Jang, D.M., Han, B.W.
PDB entry 7cxg: The ligand-free structure of human PPARgamma LBD Q286E mutant
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2020-09-01
Authors: Jang, D.M., Han, B.W.
PDB entry 7cxh: The ligand-free structure of human PPARgamma LBD Q286E mutant in the presence of the SRC-1 coactivator peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-09-01
Authors: Jang, D.M., Han, B.W.
PDB entry 7cxi: The ligand-free structure of human PPARgamma LBD F287Y mutant in the presence of the SRC-1 coactivator peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-09-01
Authors: Jang, D.M., Han, B.W.
PDB entry 7cxj: The ligand-free structure of human PPARgamma LBD R288C mutant in the presence of the SRC-1 coactivator peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-09-01
Authors: Jang, D.M., Han, B.W.
PDB entry 7cxk: The ligand-free structure of human PPARgamma LBD R288H mutant in the presence of the SRC-1 coactivator peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-09-01
Authors: Jang, D.M., Han, B.W.
PDB entry 7cxl: The ligand-free structure of human PPARgamma LBD S289C mutant in the presence of the SRC-1 coactivator peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-09-01
Authors: Jang, D.M., Han, B.W.
PDB entry 7cxm: Architecture of a SARS-CoV-2 mini replication and transcription complex
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-09-02
Authors: Yan, L., Zhang, Y., Ge, J., Zheng, L., Gao, Y., Wang, T., Jia, Z., Wang, H., Huang, Y., Li, M., Wang, Q., Rao, Z., Lou, Z.
PDB entry 7cxn: Architecture of a SARS-CoV-2 mini replication and transcription complex
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2020-09-02
Authors: Yan, L., Zhang, Y., Ge, J., Zheng, L., Gao, Y., Wang, T., Jia, Z., Wang, H., Huang, Y., Li, M., Wang, Q., Rao, Z., Lou, Z.
PDB entry 7cxo: Crystal structure of Arabinose isomerase from hybrid AI10
Classification: ISOMERASE
Source organism: Alicyclobacillus sp. TP-7; Escherichia coli O157:H7; Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-09-02
Authors: Hoang, N.K.Q., Dhanasingh, I., Cao, T.P., Sung, J.Y., Shin, S.M., Lee, D.W., Lee, S.H.
PDB entry 7cxr: Cryo-EM structure of human TMEM120A/TACAN
Classification: MEMBRANE PROTEIN
Source organism: Anaplasma marginale; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-09-02
Authors: Yan, Z., Wu, J., Ke, M.
PDB entry 7cxs: Crystal structure of CmnK, a L-Dap formation enzyme in capreomycin biosynthesis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-09-02
Authors: Chang, C.Y., Hsu, S.H.
PDB entry 7cxt: Crystal structure of a GDP-6-OMe-4-keto-L-xylo-heptose reductase from C.jejuni
Classification: OXIDOREDUCTASE
Source organism: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-09-02
Authors: Kim, J.H., Kim, J.S.
PDB entry 7cxu: Crystal structure of CmnK in complex with NAD+
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2020-09-02
Authors: Chang, C.Y., Hsu, S.H.
PDB entry 7cxv: Crystal structure of CmnK
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-09-02
Authors: Chang, C.Y., Hsu, S.H.
PDB entry 7cxw: Structural insights into novel mechanisms of inhibition of the major b-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus (C116 flipped form)
Classification: LYASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-09-02
Authors: Jin, M.S., Kim, S., Yeon, J., Sung, J., Kim, N.J., Hong, S.
PDB entry 7cxx: Structural insights into novel mechanisms of inhibition of the major b-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus (disulfide-bonded form)
Classification: LYASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-09-02
Authors: Jin, M.S., Kim, S., Yeon, J., Sung, J., Kim, N.J., Hong, S.
PDB entry 7cxy: Structural insights into novel mechanisms of inhibition of the major b-carbonic anhydrase CafB from the pathogenic fungus Aspergillus fumigatus (zinc-bound form)
Classification: LYASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-09-02
Authors: Jin, M.S., Kim, S., Yeon, J., Sung, J., Kim, N.J., Hong, S.
PDB entry 7cxz: crystal structure of pco2
Classification: PROTEIN BINDING
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.561 Å
Deposited: 2020-09-02
Authors: Guo, Q., Xu, C., Liao, S., Chen, Z.
PDB entry 7cy0: Crystal structure of S185H mutant PET hydrolase from Ideonella sakaiensis
Classification: HYDROLASE
Source organism: Ideonella sakaiensis (strain NBRC 110686 / TISTR 2288 / 201-F6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2020-09-03
Authors: Han, X., Liu, W.D., Zheng, Y.Y., Chen, C.C., Guo, R.T.
PDB entry 7cy1: Crystal Structure of MglC from Myxococcus xanthus
Classification: CYTOSOLIC PROTEIN
Source organism: Myxococcus xanthus DK 1622
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2020-09-03
Authors: Thakur, K.G., Kapoor, S., Kodesia, A.
PDB entry 7cy2: The open conformation of MSMEG_1954 from Mycobacterium smegmatis
Classification: TRANSPORT PROTEIN
Source organism: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2020-09-03
Authors: Zhang, Q., Rao, Z.H.
PDB entry 7cy3: Crystal structure of a biodegradable plastic-degrading cutinase from Paraphoma sp. B47-9.
Classification: HYDROLASE
Source organism: Paraphoma sp. B47-9
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2020-09-03
Authors: Suzuki, K., Koitabashi, M.
PDB entry 7cy4: Crystal Structure of CMD1 in apo form
Classification: TRANSFERASE
Source organism: Chlamydomonas reinhardtii; Escherichia coli (strain B / BL21-DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-09-03
Authors: Li, W., Zhang, T., Sun, M., Ding, J.
PDB entry 7cy5: Crystal Structure of CMD1 in complex with vitamin C
Classification: TRANSFERASE
Source organism: Chlamydomonas reinhardtii; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-09-03
Authors: Li, W., Zhang, T., Sun, M., Ding, J.
PDB entry 7cy6: Crystal Structure of CMD1 in complex with 5mC-DNA
Classification: TRANSFERASE
Source organism: Chlamydomonas reinhardtii; Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-09-03
Authors: Li, W., Zhang, T., Sun, M., Ding, J.
PDB entry 7cy7: Crystal Structure of CMD1 in complex with DNA
Classification: TRANSFERASE
Source organism: Chlamydomonas reinhardtii; Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-09-03
Authors: Li, W., Zhang, T., Sun, M., Ding, J.
PDB entry 7cy8: Crystal Structure of CMD1 in complex with 5mC-DNA and vitamin C
Classification: TRANSFERASE
Source organism: Chlamydomonas reinhardtii; Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-09-03
Authors: Li, W., Zhang, T., Sun, M., Ding, J.
PDB entry 7cy9: Crystal structure of a biodegradable plastic-degrading cutinase from Paraphoma sp. B47-9 solved by getting the phase from anomalous scattering of uncovalently coordinated arsenic (cacodylate).
Classification: HYDROLASE
Source organism: Paraphoma sp. B47-9
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2020-09-03
Authors: Suzuki, K., Koitabashi, M.
PDB entry 7cya: Saimiri boliviensis boliviensis galectin-13 with lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Saimiri boliviensis boliviensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2020-09-03
Authors: Su, J.
PDB entry 7cyb: Saimiri boliviensis boliviensis galectin-13 with glycerol
Classification: SUGAR BINDING PROTEIN
Source organism: Saimiri boliviensis boliviensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-09-03
Authors: Su, J.
PDB entry 7cyc: Cryo-EM structures of Alphacoronavirus spike glycoprotein
Classification: STRUCTURAL PROTEIN
Source organism: Human coronavirus 229E
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2020-09-03
Authors: Song, X., Shi, Y., Ding, W., Liu, Z.J., Peng, G.
PDB entry 7cyd: Cryo-EM structures of Alphacoronavirus spike glycoprotein
Classification: STRUCTURAL PROTEIN
Source organism: Human coronavirus 229E
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2020-09-03
Authors: Song, X., Shi, Y., Ding, W., Liu, Z.J., Peng, G.
PDB entry 7cye: Cryo-EM structure of sodium-dependent bicarbonate transporter SbtA from Synechocystis sp. PCC 6803
Classification: TRANSPORT PROTEIN
Source organism: Synechocystis sp. PCC 6803 substr. Kazusa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2020-09-03
Authors: Liu, X.Y., Jiang, Y.L., Wang, L., Hou, W.T., Chen, Y., Zhou, C.Z.
PDB entry 7cyf: Cryo-EM structure of bicarbonate transporter SbtA in complex with PII-like signaling protein SbtB from Synechocystis sp. PCC 6803
Classification: TRANSPORT PROTEIN
Source organism: Synechocystis sp. PCC 6803 substr. Kazusa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2020-09-03
Authors: Liu, X.Y., Jiang, Y.L., Wang, L., Hou, W.T., Chen, Y., Zhou, C.Z.
PDB entry 7cyg: Crystal structure of a cysteine-pair mutant (Y113C-P190C) of a bacterial bile acid transporter before disulfide bond formation
Classification: TRANSPORT PROTEIN
Source organism: Yersinia frederiksenii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.198 Å
Deposited: 2020-09-03
Authors: Wang, X., Lyu, Y., Ji, Y., Sun, Z., Zhou, X.
PDB entry 7cyh: Binding interface of SARS-CoV-2 RBD and its neutralizing antibody HB27
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-09-03
Authors: Wang, X., Zhu, L.
PDB entry 7cyi: Crystal structure of Alcohol dehydrogenase 1 from Artemisia annua
Classification: OXIDOREDUCTASE
Source organism: Artemisia annua
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2020-09-03
Authors: Feng, X., Fan, S., Lv, G., Li, M., Wu, G., Jin, Y., Yang, Z.
PDB entry 7cyk: Crystal structure of a second cysteine-pair mutant (V110C-I197C) of a bacterial bile acid transporter before disulfide bond formation
Classification: TRANSPORT PROTEIN
Source organism: Yersinia frederiksenii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.785 Å
Deposited: 2020-09-03
Authors: Wang, X., Lyu, Y., Ji, Y., Sun, Z., Zhou, X.
PDB entry 7cyl: Crystal structure of Karyopherin-beta2 in complex with FUS PY-NLS(P525L)
Classification: TRANSPORT PROTEIN/RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-09-03
Authors: Yoshizawa, T., Chook, Y.M.
PDB entry 7cym: Crystal structure of LI-Cadherin EC1-4
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-09-03
Authors: Caaveiro, J.M.M., Yui, A., Tsumoto, K.
PDB entry 7cyn: Cryo-EM structure of human TLR7 in complex with UNC93B1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-09-03
Authors: Ohto, U., Ishida, H., Shimizu, T.
PDB entry 7cyp: Complex of SARS-CoV-2 spike trimer with its neutralizing antibody HB27
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-09-04
Authors: Wang, X., Zhu, L.
PDB entry 7cyq: Cryo-EM structure of an extended SARS-CoV-2 replication and transcription complex reveals an intermediate state in cap synthesis
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2020-09-04
Authors: Yan, L., Ge, J., Zheng, L., Zhang, Y., Gao, Y., Wang, T., Wang, H., Huang, Y., Li, M., Wang, Q., Rao, Z., Lou, Z.
PDB entry 7cyr: The closed conformation of MSMEG_1954 from Mycobacterium smegmatis
Classification: TRANSPORT PROTEIN
Source organism: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-09-04
Authors: Zhang, Q., Rao, Z.H.
PDB entry 7cys: Crystal structure of barley agmatine coumaroyltransferase (HvACT), an N-acyltransferase in BAHD superfamily
Classification: TRANSFERASE
Source organism: Hordeum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2020-09-04
Authors: Yamane, M., Takenoya, M., Sue, M., Yajima, S.
PDB entry 7cyu: Crystal structure of human BAF57 HMG domain
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-09-04
Authors: Heo, Y., Yun, J.H., Park, J.H., Lee, W.
PDB entry 7cyv: Crystal structure of FD20, a neutralizing single-chain variable fragment (scFv) in complex with SARS-CoV-2 Spike receptor-binding domain (RBD)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.13 Å
Deposited: 2020-09-04
Authors: Li, Y., Li, T., Lai, Y., Cai, H., Yao, H., Li, D.
PDB entry 7cyw: Crystal structure of a flavonoid C-glucosyltrasferase from Fagopyrum esculentum (FeCGTa) complexed with BrUTP
Classification: TRANSFERASE
Source organism: Fagopyrum esculentum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-04
Authors: Koyanagi, Y., Taguchi, G., Arai, R.
PDB entry 7cyx: Crystal strcuture of Glycine oxidase from Bacillus cereus ATCC 14579
Classification: FLAVOPROTEIN
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2020-09-05
Authors: Seok, J., Kim, K.-J.
PDB entry 7cyy: Crystal structure of Arabinose isomerase from hybrid AI8 with Adonitol
Classification: ISOMERASE
Source organism: Alicyclobacillus acidocaldarius; Alicyclobacillus sp. TP-7; Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-09-05
Authors: Hoang, N.K.Q., Dhanasingh, I., Cao, T.P., Sung, J.Y., Shin, S.M., Lee, D.W., Lee, S.H.
PDB entry 7cyz: The structure of human ORP3 OSBP-related domain
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-09-05
Authors: Dong, X.
PDB entry 7cz0: Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb92)
Classification: FLUORESCENT PROTEIN
Source organism: Galaxea fascicularis; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2020-09-06
Authors: Cai, H., Yao, H., Li, T., Hutter, C., Tang, Y., Li, Y., Seeger, M., Li, D.
PDB entry 7cz2: The complex structure of MSMEG_1954-ADP from Mycobacterium smegmatis
Classification: TRANSPORT PROTEIN
Source organism: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-07
Authors: Zhang, Q., Rao, Z.H.
PDB entry 7cz3: Crystal strcuture of Acyl-CoA thioesterase from Bacillus cereus ATCC 14579
Classification: HYDROLASE
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-09-07
Authors: Park, J., Kim, K.-J.
PDB entry 7cz4: Structure of SARS-CoV-2 macro domain in complex with ADP-ribose
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2020-09-07
Authors: Lin, M.H., Hsu, C.H.
PDB entry 7cz5: Cryo-EM structure of the human growth hormone-releasing hormone receptor-Gs protein complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2020-09-07
Authors: Zhou, F., Zhang, H., Cong, Z., Zhao, L., Zhou, Q., Mao, C., Cheng, X., Shen, D., Cai, X., Ma, C., Wang, Y., Dai, A., Zhou, Y., Sun, W., Zhao, F., Zhao, S., Jiang, H., Jiang, Y., Yang, D., Xu, H.E., Zhang, Y., Wang, M.
PDB entry 7cz6: Protrusion structure of Omono River virus
Classification: VIRAL PROTEIN
Source organism: Omono River virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-09-07
Authors: Shao, Q., Jia, X., Gao, Y., Liu, Z.
PDB entry 7cz9: Crystal structure of multidrug efflux transporter OqxB from Klebsiella pneumoniae
Classification: MEMBRANE PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-09-07
Authors: Murakami, S., Okada, U., Yamashita, E.
PDB entry 7cza: Hexachlorobenzene monooxygenase (HcbA1) from Nocardioides sp. strain PD653 complexed with FMN
Classification: OXIDOREDUCTASE
Source organism: Nocardioides sp. PD653
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2020-09-07
Authors: Guo, Y., Zheng, J.T., Zhou, N.Y.
PDB entry 7czb: The cryo-EM structure of the ERAD retrotranslocation channel formed by human Derlin-1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-09-07
Authors: Rao, B., Li, S., Yao, D., Wang, Q., Xia, Y., Jia, Y., Shen, Y., Cao, Y.
PDB entry 7czc: Crystal structure of apo-FabG from Vibrio harveyi
Classification: OXIDOREDUCTASE
Source organism: Vibrio harveyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-09-08
Authors: Singh, B.K., Kumar, A., Paul, B., Biswas, R., Das, A.K.
PDB entry 7czd: Crystal structure of PD-L1 in complex with a VHH
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-09-08
Authors: Wang, C.
PDB entry 7cze: Crystal structure of Epstein-Barr virus (EBV) gHgL and in complex with the ligand binding domian (LBD) of EphA2
Classification: VIRAL PROTEIN
Source organism: Epstein-Barr virus (strain B95-8); Homo sapiens; Human herpesvirus 4 strain B95-8
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-09-08
Authors: Su, C., Wu, L.L., Song, H., Chai, Y., Qi, J.X., Yan, J.H., Gao, G.F.
PDB entry 7czf: Crystal structure of Kaposi Sarcoma associated herpesvirus (KSHV ) gHgL in complex with the ligand binding domian (LBD) of EphA2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human herpesvirus 8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-09-08
Authors: Su, C., Wu, L.L., Song, H., Chai, Y., Qi, J.X., Yan, J.H., Gao, G.F.
PDB entry 7czg: Crystal structure of FIP200 Claw domain apo form
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-08
Authors: Zhou, Z.X., Pan, L.F.
PDB entry 7czh: PL24 ulvan lyase-Uly1
Classification: LYASE
Source organism: Catenovulum maritimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2020-09-08
Authors: Zhang, Y.Z., Chen, X.L., Dong, F., Xu, F.
PDB entry 7czi: Structure of the CYP102A1 Haem Domain with N-{2-[4-(Trifluoromethoxy)phenoxy]}acetoyl-L-Phenylalanine
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-09-08
Authors: Stanfield, J.K., Sugimoto, H., Shoji, O.
PDB entry 7czj: The Crystal Structure of Family 20 CBM of Maltotetraose-forming Amylase from Pseudomonas Saccharophila STB07
Classification: HYDROLASE
Source organism: Pelomonas saccharophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.495 Å
Deposited: 2020-09-08
Authors: Li, Z.F., Ban, X.F., Zhang, Z.Q., Li, C.M.
PDB entry 7czl: Structural insights into a dimeric Psb27-photosystem II complex from a cyanobacterium Thermosynechococcus vulcanus
Classification: PLANT PROTEIN
Source organism: Thermosynechococcus vulcanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2020-09-09
Authors: Pi, X., Huang, G., Xiao, Y.
PDB entry 7czm: Crystal structure of FIP200 Claw/p-OPtineurin LIR complex
Classification: SIGNALING PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-09-09
Authors: Zhou, Z.X., Pan, L.F.
PDB entry 7czo: N-terminal domain of HipA toxin
Classification: UNKNOWN FUNCTION
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-09-09
Authors: Kang, S.M.
PDB entry 7czp: S protein of SARS-CoV-2 in complex bound with P2B-1A1
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czq: S protein of SARS-CoV-2 in complex bound with P2B-1A10
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czr: S protein of SARS-CoV-2 in complex bound with P5A-1B8_2B
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czs: S protein of SARS-CoV-2 in complex bound with P5A-1B8_3B
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czt: S protein of SARS-CoV-2 in complex bound with P5A-2G9
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czu: S protein of SARS-CoV-2 in complex bound with P5A-1B6_2B
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czv: S protein of SARS-CoV-2 in complex bound with P5A-1B6_3B
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czw: S protein of SARS-CoV-2 in complex bound with P5A-2G7
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czx: S protein of SARS-CoV-2 in complex bound with P5A-1B9
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czy: S protein of SARS-CoV-2 in complex bound with P5A-2F11_2B
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7czz: S protein of SARS-CoV-2 in complex bound with P5A-2F11_3B
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7d00: S protein of SARS-CoV-2 in complex bound with FabP5A-1B8
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7d01: Lysozyme structure SS2 from SS mode
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-09-09
Authors: Kang, H.S., Lee, S.J.
PDB entry 7d02: Lysozyme structure SASE2 from SASE mode
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-09-09
Authors: Kang, H.S., Lee, S.J.
PDB entry 7d03: S protein of SARS-CoV-2 in complex bound with FabP5A-2G7
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q.
PDB entry 7d04: Lysozyme structure SS3 from SS mode
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-09-09
Authors: Kang, H.S., Lee, S.J.
PDB entry 7d05: Lysozyme structure SASE3 from SASE mode
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-09-09
Authors: Kang, H.S., Lee, S.J.
PDB entry 7d06: Cryo EM structure of the nucleotide free Acinetobacter MlaFEDB complex
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-09-09
Authors: Zhang, Y.Y., Fan, Q.X., Chi, X.M., Zhou, Q., Li, Y.Y.
PDB entry 7d08: Acinetobacter MlaFEDB complex in ATP-bound Vtrans1 conformation
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-09-09
Authors: Zhang, Y.Y., Fan, Q.X., Chi, X.M., Zhou, Q., Li, Y.Y.
PDB entry 7d09: Acinetobacter MlaFEDB complex in ATP-bound Vtrans2 conformation
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-09-09
Authors: Zhang, Y.Y., Fan, Q.X., Chi, X.M., Zhou, Q., Li, Y.Y.
PDB entry 7d0a: Acinetobacter MlaFEDB complex in ADP-vanadate trapped Vclose conformation
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-09-09
Authors: Zhang, Y.Y., Fan, Q.X., Chi, X.M., Zhou, Q., Li, Y.Y.
PDB entry 7d0b: S protein of SARS-CoV-2 in complex bound with P5A-3C12_1B
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Wang, R.K., Ju, B., Yu, J.F., Zhang, Y.Y., Liu, N., Wang, H.W., Wang, X.Q., Zhang, L.Q., Zhou, Q.
PDB entry 7d0c: S protein of SARS-CoV-2 in complex bound with P5A-3A1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Wang, R.K., Yu, J.F., Zhang, Y.Y., Liu, N., Wang, H.W., Wang, X.Q., Zhang, L.Q., Zhou, Q.
PDB entry 7d0d: S protein of SARS-CoV-2 in complex bound with P5A-3C12_2B
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-09-09
Authors: Yan, R.H., Wang, R.K., Ju, B., Yu, J.F., Zhang, Y.Y., Liu, N., Wang, H.W., Wang, X.Q., Zhang, L.Q., Zhou, Q.
PDB entry 7d0e: Crystal structure of FIP200 Claw/p-CCPG1 FIR2
Classification: SIGNALING PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-09-09
Authors: Zhou, Z.X., Pan, L.F.
PDB entry 7d0f: cryo-EM structure of a pre-catalytic group II intron RNP
Classification: TRANSFERASE/RNA
Source organism: Lactococcus lactis subsp. cremoris
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2020-09-10
Authors: Liu, N., Dong, X.L., Hu, C.X., Zeng, J.W., Wang, J.W., Wang, J., Wang, H.W., Belfort, M.
PDB entry 7d0g: Cryo-EM structure of a pre-catalytic group II intron
Classification: TRANSFERASE/RNA
Source organism: Lactococcus lactis subsp. cremoris
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2020-09-10
Authors: Liu, N., Dong, X.L., Hu, C.X., Zeng, J.W., Wang, J.W., Wang, J., Wang, H.W., Belfort, M.
PDB entry 7d0i: Cryo-EM structure of Schizosaccharomyces pombe Atg9
Classification: UNKNOWN FUNCTION
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-09-10
Authors: Matoba, K., Tsutsumi, A., Kikkawa, M., Noda, N.N.
PDB entry 7d0j: Photosystem I-LHCI-LHCII of Chlamydomonas reinhardtii
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2020-09-10
Authors: Wang, W.D., Shen, L.L., Huang, Z.H., Han, G.Y., Zhang, X., Shen, J.R.
PDB entry 7d0k: The icosahedral capsid of Omono River virus (strain:LZ)
Classification: VIRUS
Source organism: Omono River virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2020-09-11
Authors: Shao, Q., Jia, X., Gao, Y., Liu, Z.
PDB entry 7d0l: The major capsid of Omono River virus (strain:LZ), protrusion-free status.
Classification: VIRUS
Source organism: Omono River virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2020-09-11
Authors: Shao, Q., Jia, X., Gao, Y., Liu, Z.
PDB entry 7d0m: Crystal structure of mouse CRY1 with bound cryoprotectant
Classification: CIRCADIAN CLOCK PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-09-11
Authors: Miller, S.A., Aikawa, Y., Hirota, T.
PDB entry 7d0n: Crystal structure of mouse CRY2 apo form
Classification: CIRCADIAN CLOCK PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-09-11
Authors: Miller, S.A., Aikawa, Y., Hirota, T.
PDB entry 7d0o: Crystal structure of human HBO1-BRPF2 in apo form
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2020-09-11
Authors: Li, W., Ding, J.
PDB entry 7d0p: Crystal structure of human HBO1-BRPF2 in complex with propionyl-coenzyme A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-11
Authors: Li, W., Ding, J.
PDB entry 7d0q: Crystal structure of human HBO1-BRPF2 in complex with butyryl-coenzyme A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2020-09-11
Authors: Li, W., Ding, J.
PDB entry 7d0r: Crystal structure of human HBO1-BRPF2 in complex with crotonoyl-coenzyme A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-09-11
Authors: Li, W., Ding, J.
PDB entry 7d0s: Crystal structure of human HBO1-BRPF2 in complex with succinyl-coenzyme A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-09-11
Authors: Li, W., Ding, J.
PDB entry 7d0t: Structure of the CYP102A1 Haem Domain with N-Carboxybenzyl-L-Prolyl-L-Phenylalanine in complex with (S)-1-Indanylamine
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2020-09-11
Authors: Stanfield, J.K., Sugimoto, H., Shoji, O.
PDB entry 7d0u: Structure of the CYP102A1 Haem Domain with N-enanthyl-L-prolyl-L-phenylalanine in complex with Ethylamine
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2020-09-11
Authors: Stanfield, J.K., Sugimoto, H., Shoji, O.
PDB entry 7d0v: Crystal structure of Taiwan cobra 5'-nucleotidase
Classification: HYDROLASE
Source organism: Naja atra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.175 Å
Deposited: 2020-09-12
Authors: Tsai, M.-H., Lin, I.-J., Lin, C.-C., Wu, W.-G.
PDB entry 7d0w: Crystal structure of Hen Egg White Lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-09-12
Authors: Iqbal, S., Krishnasamy, G.
PDB entry 7d0x: NMR solution structures of the DNA minidumbbell formed by 5'-mCTTGXmCTTG-3'
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2020-09-12
Authors: Wan, L., Guo, P., Lam, S.L.
PDB entry 7d0y: NMR solution structures of the DNA minidumbbell formed by two CmCTG repeats at pH 5
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2020-09-12
Authors: Wan, L., Guo, P., Lam, S.L.
PDB entry 7d0z: NMR solution structures of the DNA minidumbbell formed by two CCTG repeats at pH 5
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2020-09-12
Authors: Guo, P., Lam, S.L.
PDB entry 7d10: Human NKCC1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2020-09-12
Authors: Zhang, S., Yang, M.
PDB entry 7d11: Solution structure of a WKRY DNA-binding domain
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 2020-09-12
Authors: Li, Q.W., Hu, Y.F., Jin, C.W.
PDB entry 7d12: NMR solution structures of CAG RNA-DB213 binding complex
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2020-09-12
Authors: Chan, H.Y.E., Guo, P.
PDB entry 7d13: NERP-2 in a HFIP solution
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-09-13
Authors: Park, O., Cheong, C., Jeon, Y.
PDB entry 7d14: Mouse KCC2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-09-13
Authors: Zhang, S., Yang, M.
PDB entry 7d16: NERP-2 in a DPC solution
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-09-13
Authors: Park, O., Cheong, C., Jeon, Y.
PDB entry 7d17: Crystal structure of Macrostomum lignano glutaminyl cyclase
Classification: TRANSFERASE
Source organism: Macrostomum lignano
Experimental method: X-RAY DIFFRACTION
Resolution: 2.998 Å
Deposited: 2020-09-14
Authors: Huang, K.-F., Huang, J.-S., Wu, M.-L., Hsieh, W.-L., Wang, A.H.-J.
PDB entry 7d18: Crystal structure of Acidobacteriales bacterium glutaminyl cyclase
Classification: TRANSFERASE
Source organism: Acidobacteriales bacterium 59-55
Experimental method: X-RAY DIFFRACTION
Resolution: 1.332 Å
Deposited: 2020-09-14
Authors: Huang, K.-F., Huang, J.-S., Wu, M.-L., Hsieh, W.-L., Wang, A.H.-J.
PDB entry 7d19: Crystal structure of mouse Cryptochrome 1 in complex with compound TH129
Classification: CIRCADIAN CLOCK PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-09-14
Authors: Miller, S.A., Hirota, T.