LiteFold/PDB huggingface dataset:
PDB entry 9mml: RB1 Fab bound to 1A6 anti-idiotype Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2024-12-20
Authors: Warren, C.
PDB entry 9mmm: H2AX containing nucleosomes, Parallel stack
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-12-20
Authors: Panigrahi, R., Edwards, R., Glover, J.N.M.
PDB entry 9mmn: H2AX containing nucleosomes, Left offset stack
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-12-20
Authors: Panigrahi, R., Edwards, R., Glover, J.N.M.
PDB entry 9mmo: H2AX containing nucleosomes, Right offset stack
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-12-20
Authors: Panigrahi, R., Edwards, R., Glover, J.N.M.
PDB entry 9mmp: Cryo-EM structure of CRAF/MEK1/14-3-3 complex (autoinhibited conformation)
Classification: TRANSFERASE
Source organism: Homo sapiens; Spodoptera exigua
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-12-20
Authors: Jang, D.M., Jeon, H., Eck, M.J.
PDB entry 9mmq: Cryo-EM structure of CRAF/MEK1 complex (kinase domain)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-20
Authors: Jang, D.M., Jeon, H., Eck, M.J.
PDB entry 9mmr: Cryo-EM structure of CRAF/MEK1/14-3-3 complex (open monomer conformation, CRAF Y340D/Y341D mutant)
Classification: TRANSFERASE
Source organism: Homo sapiens; Spodoptera exigua
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-12-20
Authors: Jang, D.M., Jeon, H., Eck, M.J.
PDB entry 9mms: Cryo-EM structure of CRAF/MEK1 complex (kinase domain, CRAF Y340D/Y341D mutant)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-20
Authors: Jang, D.M., Jeon, H., Eck, M.J.
PDB entry 9mmt: H2AX containing nucleosome, Unwrapped (Class 2)
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-12-20
Authors: Panigrahi, R., Edwards, R., Glover, J.N.M.
PDB entry 9mmu: M5 protein with Factor H 6-7 domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Streptococcus pyogenes str. Manfredo
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-12-20
Authors: Kumar, A., Ghosh, P.
PDB entry 9mmv: RB1 Fab bound to 1D4 anti-idiotype Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2024-12-20
Authors: Warren, C.
PDB entry 9mmw: CRISPR-associated deaminase Cad1 in cA4 bound in hexamer form refined against the consensus map
Classification: ANTIVIRAL PROTEIN/RNA
Source organism: Thermoanaerobaculum aquaticum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.36 Å
Deposited: 2024-12-20
Authors: Li, H., Zhao, Y., Whyms, C.
PDB entry 9mmx: M6 protein with Factor H 6-7 domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Streptococcus pyogenes JRS4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-12-20
Authors: Kumar, A., Ghosh, P.
PDB entry 9mmy: E. coli GroEL bound with ATP and PBZ1587 inhibitor
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-12-20
Authors: Johnson, S.M., Chen, Q.
PDB entry 9mmz: E. coli SR1 single-ring GroEL oligomer
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-20
Authors: Johnson, S.M., Chen, Q.
PDB entry 9mn0: E. coli SR1 single-ring GroEL templated into pseudo-double-ring complex with PBZ1587 inhibitor
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-20
Authors: Johnson, S.M., Chen, Q.
PDB entry 9mn1: E. coli SR1 single-ring GroEL oligomer
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-12-20
Authors: Johnson, S.M., Chen, Q.
PDB entry 9mn2: Crystal Structure of the B6C Region of the Group B Streptococcus Beta Antigen C Protein
Classification: PROTEIN BINDING
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-12-20
Authors: Zhang, Y., Geisbrecht, B.V.
PDB entry 9mn3: E. coli GroES-GroEL-GroES football complex
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-20
Authors: Johnson, S.M., Chen, Q.
PDB entry 9mn4: Structure of the human mitochondrial initially transcribing complex, IC3
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-12-20
Authors: Herbine, K.H., Nayak, A.R., Temiakov, D.
PDB entry 9mn5: Structure of the human mitochondrial open transcription initiation complex, IC0
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-12-20
Authors: Herbine, K.H., Nayak, A.R., Temiakov, D.
PDB entry 9mn6: Structure of the human mitochondrial late-stage transcription initiation complex, IC8
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2024-12-20
Authors: Herbine, K.H., Nayak, A.R., Temiakov, D.
PDB entry 9mn7: Structure of the human mitochondrial late-stage transcription initiation complex, IC8
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-12-20
Authors: Herbine, K.H., Nayak, A.R., Temiakov, D.
PDB entry 9mn8: Structure of the human mitochondrial transcription initiation transitional complex, TC8
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2024-12-20
Authors: Herbine, K.H., Nayak, A.R., Temiakov, D.
PDB entry 9mn9: Structure of the human mitochondrial promoter-initiated transcription elongation complex, P-EC13
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2024-12-20
Authors: Herbine, K.H., Nayak, A.R., Temiakov, D.
PDB entry 9mna: Structure of the human mitochondrial promoter-initiated transcription elongation complex with TEFM, pEC9-TEFM
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2024-12-20
Authors: Herbine, K.H., Nayak, A.R., Temiakov, D.
PDB entry 9mnb: Beta1-tryptase monomer bound to inhibitory Fabs E82.AS and E104.v2
Classification: IMMUNE SYSTEM/Hydrolase
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-20
Authors: Azumaya, C.M., Maun, H.R., Rohou, A.L.
PDB entry 9mnd: Band 3 OF/IF1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-12-20
Authors: Vallese, F., Kim, K., Clarke, O.B.
PDB entry 9mne: Crystal structure of enteropathogenic Escherichia coli EspC
Classification: HYDROLASE
Source organism: Escherichia coli O127:H6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2024-12-21
Authors: Pilapitiya, A.U., Heras, B., Paxman, J.J.
PDB entry 9mng: Band 3 OF/OF
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-12-21
Authors: Vallese, F., Kim, K., Clarke, O.B.
PDB entry 9mnh: Angavokely virus (AngV) fusion (F) protein ectodomain in pre-fusion conformation
Classification: VIRAL PROTEIN
Source organism: Angavokely henipavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.03 Å
Deposited: 2024-12-21
Authors: Lella, M., Acharya, P.
PDB entry 9mni: CGRP Receptor in complex with dC2_050
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.06 Å
Deposited: 2024-12-21
Authors: Cao, J., Cary, B.P., Belousoff, M.J., Wootten, D.L.
PDB entry 9mnm: SPA of purified HIV-1 CA protein in vitro assembled with IP6 (mature morphology). 500 uM LEN was added post assembly.
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus type 1 BH10
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-12-22
Authors: Ricana, C.L., Dick, R.A.
PDB entry 9mnn: Crystal structure of L. monocytogenes MenD with Mg2+ and intermediate I bound
Classification: TRANSFERASE
Source organism: Listeria monocytogenes 10403S
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2024-12-22
Authors: Klein, M., Given, F.M., Ho, N.A.T., Allison, T.M., Johnston, J.M.
PDB entry 9mno: Structure of the TelA-associated type VII secretion system chaperone LcpA in complex with the chaperone binding site of TelA
Classification: CHAPERONE
Source organism: Streptococcus intermedius B196
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-12-23
Authors: Garrett, S.R., Kim, Y., Whitney, J.C.
PDB entry 9mnq: Structure of Hepatitis C virus envelope glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM10-30
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macaca mulatta; Recombinant Hepatitis C virus HK6a/JFH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2024-12-23
Authors: Nguyen, T.K.Y., Wilson, I.A.
PDB entry 9mnr: Panoptes OptS minimal CRISPR polymerase (mCpol) from Klebsiella pneumoniae strain KP67
Classification: ANTIVIRAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-12-23
Authors: Dinh, D.M., Nguyen, C.M., Morehouse, B.R.
PDB entry 9mns: Structure of Hepatitis C virus envelope glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM1-36
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macaca mulatta; Recombinant Hepatitis C virus HK6a/JFH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2024-12-23
Authors: Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.
PDB entry 9mnt: Structure of Hepatitis C virus envelope glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM1-73
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macaca mulatta; Recombinant Hepatitis C virus HK6a/JFH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-12-23
Authors: Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.
PDB entry 9mnu: Structure of Hepatitis C virus envelope glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM11-48
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macaca mulatta; Recombinant Hepatitis C virus HK6a/JFH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-12-23
Authors: Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.
PDB entry 9mnv: Co-MAHF-9 A8Y Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.8 Å
Deposited: 2024-12-23
Authors: Richardson-Matthews, R.M.
PDB entry 9mnw: Cryo-EM structure of human MPC in complex with GW604714
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM/INHIBITOR
Source organism: Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-12-24
Authors: Zhang, J., Feng, L.
PDB entry 9mnx: Cryo-EM structure of human MPC in complex with UK5099 in LMNG
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-12-24
Authors: Zhang, J., He, Z., Feng, L.
PDB entry 9mny: Cryo-EM structure of human MPC with pyruvate
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-12-24
Authors: Zhang, J., He, Z., Feng, L.
PDB entry 9mnz: Cryo-EM structure of human MPC in complex with UK5099 in nanodiscs
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2024-12-24
Authors: Zhang, J., He, Z., Feng, L.
PDB entry 9mo0: Cryo-EM structure of human MPC in complex with AKOS005153046
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-12-24
Authors: Zhang, J., He, Z., Feng, L.
PDB entry 9mo4: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-free state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.3 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mo5: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-bound partially activated state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.3 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mo6: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-free tilted state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.3 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mo7: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-bound fully activated state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mo8: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-free state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mo9: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-free rotated state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9moa: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-free tilted state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.4 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mob: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-free state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.5 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9moc: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-free rotated state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mod: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-free tilted state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.7 Å
Deposited: 2024-12-25
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9moe: Preclinical and clinical evaluation of a novel TRPA1 antagonist LY3526318
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-12-26
Authors: Nie, S.
PDB entry 9mof: Structure of the bacteriophage T4 portal-neck-tail connector complex
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-12-26
Authors: Fokine, A., Zhu, J., Klose, T., Vago, F., Arnaud, C., Wang, Z., Khare, B., Rossmann, M.G., Chen, Z., Sun, L., Fang, Q., Kuhn, R., Rao, V.B.
PDB entry 9mog: Structure of the distal part of the bacteriophage T4 tail
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-12-26
Authors: Fokine, A., Zhu, J., Klose, T., Vago, F., Arnaud, C., Wang, Z., Khare, B., Rossmann, M.G., Chen, Z., Sun, L., Fang, Q., Kuhn, R., Rao, V.B.
PDB entry 9moh: Structure of the middle part of the bacteriophage T4 tail
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-12-26
Authors: Fokine, A., Zhu, J., Klose, T., Vago, F., Arnaud, C., Wang, Z., Khare, B., Rossmann, M.G., Chen, Z., Sun, L., Fang, Q., Kuhn, R., Rao, V.B.
PDB entry 9moi: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-free rotated state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.4 Å
Deposited: 2024-12-26
Authors: Galkin, V.E., Risi, C.M.
PDB entry 9moj: Saccharolobus solfataricus GINS tetramer
Classification: REPLICATION
Source organism: Saccharolobus solfataricus P2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-12-26
Authors: Enemark, E.J., Shankar, S.
PDB entry 9mok: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-free rotated state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2024-12-26
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mol: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-free tilted state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2024-12-26
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mom: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-bound partially activated state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.1 Å
Deposited: 2024-12-26
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mon: Structure of native murine cardiac thin filament at pCa=5.8 in Ca2+-bound fully activated state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2024-12-26
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9moo: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-free state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2024-12-26
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mop: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-bound fully activated state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2024-12-26
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9moq: Cryo-EM of F-pilus
Classification: PROTEIN FIBRIL
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-12-26
Authors: Sonani, R.R., Francetic, O., Lejeune, M., Izadi-Pruneyre, N., Egelman, E.H.
PDB entry 9mor: Damaged 70S ribosome with PrfH bound
Classification: RIBOSOME
Source organism: Capnocytophaga gingivalis; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-12-27
Authors: Tian, Y., Li, Q., Jin, H., Fatma, S., Zeng, F., Huang, R.H.
PDB entry 9mos: Band 3 IF1/IF2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-12-27
Authors: Vallese, F., Kim, K., Clarke, O.B.
PDB entry 9mot: Cryo-EM structure of factor Va bound to activated protein C
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-12-27
Authors: Mohammed, B.M., Basore, K., Di Cera, E.
PDB entry 9mou: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-bound partially activated state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2024-12-27
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mov: Cryo-EM structure of factor Va bound to activated protein C
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-27
Authors: Mohammed, B.M., Basore, K., Di Cera, E.
PDB entry 9mow: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-bound fully activated state (upper strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2024-12-27
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9mox: Structure of native murine cardiac thin filament variant I79N in troponin T at pCa=5.8 in Ca2+-bound partially activated state (lower strand)
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2024-12-27
Authors: Risi, C.M., Galkin, V.E.
PDB entry 9moy: Reconstituted yeast V-ATPase bound to Rtc5p
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-12-28
Authors: Wilkens, S., Khan, M.M.
PDB entry 9moz: Crystal structure of mithramycin analogue MTM SA-5-methyl-Trp in complex with DNA AGAGGCCTCT
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2024-12-28
Authors: Hou, C., Tsodikov, O.V.
PDB entry 9mp0: The cryo-EM structure of the human DNA methyltransferases DNMT3A2 and DNMT3L dodecamer
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2024-12-29
Authors: Yan, Y., Zhou, X.E., Xu, T.H.
PDB entry 9mp1: Crystal structure of mithramycin analogue MTM SA-7-methyl-Trp in complex with double-stranded DNA AGAGGCCTCT
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-12-29
Authors: Hou, C., Tsodikov, O.V.
PDB entry 9mp2: Fatty Acid Binding Protein 4 (FABP4) Complexed with Perfluorohexadecanoic Acid (PFHxDA)
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-12-30
Authors: Birchfield, A.B., Musayev, F.N., Fuglestad, B.
PDB entry 9mp3: Mix & Quench Time Resolved Lysozyme - NAG1 Complex (0 ms)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-12-30
Authors: McLeod, M.J., Indergaard, J.A., Thorne, R.E.
PDB entry 9mp4: Mix & Quench Time Resolved Lysozyme - NAG1 Complex (8 ms)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2024-12-30
Authors: McLeod, M.J., Indergaard, J.A., Thorne, R.E.
PDB entry 9mp5: Mix & Quench Time Resolved Lysozyme - NAG1 Complex (50 ms)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2024-12-30
Authors: McLeod, M.J., Indergaard, J.A., Thorne, R.E.
PDB entry 9mp6: Mix & Quench Time Resolved Lysozyme - NAG1 Complex (150 ms)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2024-12-30
Authors: McLeod, M.J., Indergaard, J.A., Thorne, R.E.
PDB entry 9mp7: Mix & Quench Time Resolved Lysozyme - NAG1 Complex (300 ms)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-12-30
Authors: McLeod, M.J., Indergaard, J.A., Thorne, R.E.
PDB entry 9mp8: Mix & Quench Time Resolved Lysozyme - NAG1 Complex (750 ms)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-12-30
Authors: McLeod, M.J., Indergaard, J.A., Thorne, R.E.
PDB entry 9mp9: Mix & Quench Time Resolved Lysozyme - NAG1 Complex (1000 ms)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-12-30
Authors: McLeod, M.J., Indergaard, J.A., Thorne, R.E.
PDB entry 9mpa: Mix & Quench Time Resolved Lysozyme - NAG1 Complex (2000 ms)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-12-30
Authors: McLeod, M.J., Indergaard, J.A., Thorne, R.E.
PDB entry 9mpb: Crystal structure of the HIV V2-apex-targeting antibody RM038, derived from macaque ApexGT6 immunization
Classification: IMMUNE SYSTEM
Source organism: Macaca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-12-30
Authors: Agrawal, S., Wilson, I.A.
PDB entry 9mpc: Crystal structure of the HIV V2-apex-targeting antibody RM018 from macaque
Classification: IMMUNE SYSTEM
Source organism: Macaca
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2024-12-30
Authors: Agrawal, S., Wilson, I.A.
PDB entry 9mpd: BRD4-BD1 in complex with cyclic peptide 4.1B
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P.
PDB entry 9mpf: BRD3-BD1 in complex with cyclic peptide 2.1B
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P.
PDB entry 9mpg: BRD2-BD1 in complex with cyclic peptide 2.1A
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P., Walshe, J.L.
PDB entry 9mph: BRD3-BD1 in complex with cyclic peptide 4.1D
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P., Franck, C.
PDB entry 9mpi: BRD4-BD1 in complex with cyclic peptide 4.1A
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P.
PDB entry 9mpj: BRD2-BD1 in complex with cyclic peptide 2.1C
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P.
PDB entry 9mpk: BRD3-BD1 in complex with cyclic peptide 2.1C-Y5A
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P.
PDB entry 9mpl: BRD2-BD1 in complex with cyclic peptide 2.1C-W11A
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P.
PDB entry 9mpm: BRD3-BD1 in complex with cyclic peptide 2.1C-W11A
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P.
PDB entry 9mpn: BRD3-BD1 A128T mutant
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-12-30
Authors: Patel, K., Mackay, J.P.
PDB entry 9mpo: The cryo-EM structure of the human DNA methyltransferase DNMT3A2 and DNMT3L octamer
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2024-12-31
Authors: Yan, Y., Zhou, X.E., Xu, T.H.
PDB entry 9mpp: The cryo-EM structure of nucleosome-bound DNA methyltransferases DNMT3A2 and DNMT3L
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-31
Authors: Yan, Y., Zhou, X.E., Xu, T.H.
PDB entry 9mpq: Cryo-EM structure of VCP (consensus)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-12-31
Authors: Shah, B., Hunkeler, M., Buhrlage, S.J., Fischer, E.S.
PDB entry 9mpr: Cryo-EM structure of three VCPIP1 VCPIDs bound to VCP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-31
Authors: Shah, B., Hunkeler, M., Buhrlage, S.J., Fischer, E.S.
PDB entry 9mps: Cryo-EM structure of VCPIP1 VCPID bound to VCP D2 domain dimer (with extra D2 domain)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-31
Authors: Shah, B., Hunkeler, M., Buhrlage, S.J., Fischer, E.S.
PDB entry 9mpt: Cryo-EM structure of VCPIP1 UBX domain bound to VCP N-domain (with D1 domain)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-31
Authors: Shah, B., Hunkeler, M., Buhrlage, S.J., Fischer, E.S.
PDB entry 9mpu: Cryo-EM structure of p47 bound to VCP N-domain (with D1 domain)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-12-31
Authors: Shah, B., Hunkeler, M., Buhrlage, S.J., Fischer, E.F.
PDB entry 9mpv: Cryo-EM structure of three VCPIP1 VCPIDs bound to VCP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-31
Authors: Shah, B., Hunkeler, M., Buhrlage, S.J., Fischer, E.F.
PDB entry 9mpw: SARS-CoV2 Spike S2 Subunit in complex with M15 Antibody Fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-12-31
Authors: Sapse, I.A., Bajic, G.
PDB entry 9mpx: Crystal structure of RM014, a macaque-derived HIV V2-apex-targeting antibody from ApexGT6 immunization
Classification: IMMUNE SYSTEM
Source organism: Macaca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-12-31
Authors: Agrawal, S., Wilson, I.A.
PDB entry 9mpy: Structure of Saro_1862, a UPF0261 domain protein from Novosphingobium aromaticivorans with bound acetovanillone
Classification: HYDROLASE
Source organism: Novosphingobium aromaticivorans DSM 12444
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2025-01-01
Authors: Bingman, C.A., Hall, B.W., Fox, B.G., Donohue, T.J.
PDB entry 9mpz: Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS12
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Foot-and-mouth disease virus Asia 1; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.14 Å
Deposited: 2025-01-01
Authors: Wu, S., Lei, D.
PDB entry 9mq0: Complex of FMDV Asia1/JS/05 and porcine-derived neutralizing monoclonal antibody PAS5
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Foot-and-mouth disease virus Asia 1; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.17 Å
Deposited: 2025-01-01
Authors: Wu, S., Lei, D.
PDB entry 9mq1: Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 20D10
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2025-01-01
Authors: Leon, A.N., Brouwer, P.J.M., Rodriguez, A.J., Han, J., Ward, A.B.
PDB entry 9mq2: Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 12G1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2025-01-01
Authors: Leon, A.N., Brouwer, P.J.M., Rodriguez, A.J., Han, J., Ward, A.B.
PDB entry 9mq3: Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 6G1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2025-01-01
Authors: Leon, A.N., Brouwer, P.J.M., Rodriguez, A.J., Han, J., Ward, A.B.
PDB entry 9mq4: Damaged 70S ribosome with PrfH bound
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli 0.1197
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2025-01-01
Authors: Tian, Y., Li, Q., Jin, H., Fatma, S., Zeng, F., Huang, R.H.
PDB entry 9mq5: Crystal structure SHP2 tandem SH2 domains in complex with PZR doubly tyrosine phosphorylated ITIM peptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-01-02
Authors: Stiegler, A.L., Boggon, T.J.
PDB entry 9mq6: Cryo-EM structure of VCP/p97 and VCPIP1 (VCIP135) in the presence of AMPPNP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-01-02
Authors: Vostal, L.E., Kapoor, T.M.
PDB entry 9mq7: Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 326-366.26
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2025-01-02
Authors: Malla, T.N., Tsybovsky, Y., Zhou, T.
PDB entry 9mq8: Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 310-33-1_H02
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2025-01-02
Authors: Malla, T.N., Tsybovsky, Y., Zhou, T.
PDB entry 9mq9: Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 326-289.74
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2025-01-02
Authors: Malla, T.N., Tsybovsky, Y., Zhou, T.
PDB entry 9mqa: Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 310-7D11
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2025-01-02
Authors: Malla, T.N., Tsybovsky, Y., Zhou, T.
PDB entry 9mqb: Vitamin K-dependent gamma-carboxylase with Osteocalcin (mutant) and vitamin K hydroquinone and calcium
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2025-01-02
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9mqc: Vitamin K-dependent gamma-carboxylase with Osteocalcin (mutant) and vitamin K hydroquinone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2025-01-02
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9mqd: Cryo-EM structure of hemagglutinin H5N1 in complex with Fab 310-12D03
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2025-01-02
Authors: Malla, T.N., Tsybovsky, Y., Zhou, T.
PDB entry 9mqe: Vitamin K-dependent gamma-carboxylase with Osteocalcin and vitamin K hydroquinone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2025-01-02
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9mqf: Chloroplast acyl-ACP thioesterase from Chlamydomonas reinhardtii
Classification: HYDROLASE
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-01-02
Authors: Chen, J.A., Suo, Y., Mayfield, S.P., Burkart, M.D.
PDB entry 9mqg: RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Classification: IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-01-03
Authors: Pratap, P.P., Ozorowski, G., Ward, A.B.
PDB entry 9mqh: Inactive Mu-Opioid Receptor with Nb6M, NabFab, and isoquinuclidine compound #33
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2025-01-03
Authors: Kim, J.Y., Vigneron, S.F., Billesbolle, C., Manglik, A., Shoichet, B.K.
PDB entry 9mqi: Inactive Mu-Opioid Receptor with Nb6M, NabFab, and isoquinuclidine compound #020_E1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-01-03
Authors: Kim, J.Y., Vigneron, S.F., Billesbolle, C., Manglik, A., Shoichet, B.K.
PDB entry 9mqj: Locally-refined Inactive Mu-Opioid Receptor with Nb6M, NabFab, and isoquinuclidine compound #020_E1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2025-01-03
Authors: Kim, J.Y., Vigneron, S.F., Billesbolle, C., Manglik, A., Shoichet, B.K.
PDB entry 9mqk: Inactive Kappa-Opioid Receptor with Nb6M, NabFab, and isoquinuclidine compound #020_E1
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2025-01-03
Authors: Kim, J.Y., Vigneron, S.F., Billesbolle, C., Manglik, A., Shoichet, B.K.
PDB entry 9mql: Locally-Refined Inactive Kappa-Opioid Receptor with Nb6M, NabFab, and isoquinuclidine compound #020_E1
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2025-01-03
Authors: Kim, J.Y., Vigneron, S.F., Billesbolle, C., Manglik, A., Shoichet, B.K.
PDB entry 9mqm: Cryo-EM of MgtA in the E2-P state with bound Mg2+ at 3.1 angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Lactococcus lactis subsp. lactis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2025-01-03
Authors: Khan, M.B., Primeau, J.O., Basu, P.C., Morth, J.P., Lemieux, M.J., Young, H.S.
PDB entry 9mqn: AngV-F Pre-fusion Protein
Classification: VIRAL PROTEIN
Source organism: Angavokely henipavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.9 Å
Deposited: 2025-01-04
Authors: Lella, M., Acharya, P.
PDB entry 9mqo: Crystal structure of BCMA in complex with CA10v2 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.181 Å
Deposited: 2025-01-04
Authors: Qiu, Y.
PDB entry 9mqp: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with SelSA
Classification: HYDROLASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-01-04
Authors: Goulart Stollmaier, J., Czarnecki, B.A.R., Christianson, D.W.
PDB entry 9mqr: A8 Fab in complex with CD97
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2025-01-06
Authors: Hattori, T., Bang, I., Fang, M., Koide, S.
PDB entry 9mqs: CryoEM Structure of the Candida albicans Group I Intron-GMP Complex
Classification: RNA
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-01-06
Authors: Chung, K., Xu, L., Liu, T., Pyle, A.
PDB entry 9mqt: CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Magnesium Condition
Classification: RNA
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2025-01-06
Authors: Chung, K., Xu, L., Liu, T., Pyle, A.
PDB entry 9mqu: CryoEM Structure of the Candida albicans Group I Intron-Compound 11 Complex under Calcium Condition
Classification: RNA
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2025-01-06
Authors: Chung, K., Xu, L., Liu, T., Pyle, A.
PDB entry 9mqv: Crystal structure of human 1122A11 Fab in complex with influenza virus neuraminidase from A/Singapore/INFIMH-16-0019/2016 (H3N2)
Classification: VIRAL PROTEIN, HYDROLASE/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-01-06
Authors: Zhu, X., Wilson, I.A.
PDB entry 9mqw: Crystal structure of influenza virus N2 neuraminidase from A/Singapore/INFIMH-16-0019/2016 (H3N2)
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2025-01-06
Authors: Zhu, X., Wilson, I.A.
PDB entry 9mqx: Electron-bifurcating Tungstopyranopterin-containing aldehyde oxidoreductase with NADH
Classification: OXIDOREDUCTASE
Source organism: Acetomicrobium mobile
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-06
Authors: Feng, X., Li, H.
PDB entry 9mqy: Structure of mycobacterial NDH2 (type II NADH:quinone oxidoreductase)
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-06
Authors: Liang, Y., Rubinstein, J.L.
PDB entry 9mqz: Structure of mycobacterial NDH2 (type II NADH:quinone oxidoreductase) with 2-mercapto-quinazolinone inhibitor.
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-06
Authors: Liang, Y., Rubinstein, J.L.
PDB entry 9mr0: Neisseria meningitidis haptoglobin-hemogloblin utilization protein A
Classification: METAL TRANSPORT
Source organism: Neisseria meningitidis serogroup B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2025-01-06
Authors: Ng, D., Au, N.Y.T., Lai, C.C., Huynh, M.S., Moraes, T.F.
PDB entry 9mr1: SARS-CoV-2 S2 monomer in complex with R125-61 Fab
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2025-01-06
Authors: Park, S., Bangaru, B., Ward, A.B.
PDB entry 9mr2: SARS-CoV-2 S2 monomer in complex with NICA01A-1401 Fab
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2025-01-06
Authors: Park, S., Bangaru, B., Ward, A.B.
PDB entry 9mr4: NAC: Ribosome nascent chain complex(Oxa1L)
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2025-01-06
Authors: Maldosevic, E., Jomaa, A.
PDB entry 9mr5: Cryo-EM structure of human OATP1C1 F240A mutant in complex with estrone 3-glucuronide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2025-01-07
Authors: Ge, Y., Yadav, G.P., Jiang, J., Huang, P.
PDB entry 9mr6: X-ray crystal structure of SAMHD1 from Rhizophagus irregularis
Classification: ANTIVIRAL PROTEIN
Source organism: Rhizophagus irregularis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2025-01-07
Authors: Lachowicz, J.C., Zizola, C., Grove, T.G.
PDB entry 9mr7: Genetiocally detoxified pertussis toxin in complex with hu1B7 Fab and hu11E6 Fab
Classification: TOXIN
Source organism: Bordetella pertussis; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2025-01-07
Authors: Goldsmith, J.A., McLellan, J.S.
PDB entry 9mr8: Structure of D421-Truncated Tau Fibril
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-01-07
Authors: El Mammeri, N., Duan, P.
PDB entry 9mr9: Crystal structure of AU-15330 in complex with the bromodomain of human BRM (SMARCA2) and pVHL:ElonginC:ElonginB
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2025-01-07
Authors: Wang, M., Xu, C.
PDB entry 9mrb: The designed serine hydrolase known as dad_t1
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-01-07
Authors: Pellock, S.J., Lauko, A., Bera, A., Baker, D.
PDB entry 9mrc: Crystal Structure of TREX1 Homolog Plex9.1
Classification: DNA BINDING PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-01-07
Authors: Rogers, C.M., Langelaan, D.N.
PDB entry 9mrd: Crystal Structure of TREX1 Homolog Plex9.1 bound to ssDNA
Classification: DNA BINDING PROTEIN
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-01-07
Authors: Rogers, C.M., Langelaan, D.N.
PDB entry 9mre: From DNA-Encoded Library Screening to AM-9747 - an MTA-Cooperative PRMT5 Inhibitor with Potent Oral in vivo Efficacy
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-01-07
Authors: GhimireRijal, S., Mukund, S.
PDB entry 9mrf: De novo designed apolar residue motif transmembrane helix
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-01-07
Authors: Mravic, M., Zhang, M., Anderson, C.T.
PDB entry 9mrg: Cryo-EM structure of KwaA tetramer with C2 symmetry
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2025-01-07
Authors: Zhang, Z., Patel, D.J.
PDB entry 9mrh: Fluorescence lifetime-readout citrate sensor
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2025-01-07
Authors: Rosen, P.C., Yellen, G., Lim, D.C.
PDB entry 9mri: X-ray crystal structure of Streptomyces cacaoi PolF bound to Zn(II)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces cacaoi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.316 Å
Deposited: 2025-01-08
Authors: Blancas Cortez, J.J., Boal, A.K.
PDB entry 9mrj: Neisseria meningitidis factor H binding protein
Classification: MEMBRANE PROTEIN
Source organism: Neisseria meningitidis H44/76
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2025-01-08
Authors: Ng, D., Au, N.Y.T., Lai, C.C.C., Moraes, T.F.
PDB entry 9mrk: Glutamate activated state of the GluA2-gamma2 complex prepared at 37 degrees C
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2025-01-08
Authors: Kumar Mondal, A., Twomey, E.C.
PDB entry 9mrl: Desensitized state 1 of the GluA2-gamma2 complex prepared at 37 degrees C
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2025-01-08
Authors: Kumar Mondal, A., Twomey, E.C.