LiteFold/PDB huggingface dataset:
PDB entry 6n8u: DRAFT model of Schistosoma japonicum Glutathione S-transferase expression tag
Classification: TRANSFERASE
Source organism: Schistosoma japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2018-11-30
Authors: Tempel, W., Dong, C.
PDB entry 6n8v: Hsp104DWB open conformation
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2018-11-30
Authors: Lee, S., Rho, S.H., Lee, J., Sung, N., Liu, J., Tsai, F.T.F.
PDB entry 6n8w: Structure of Unliganded Hsp90-Beta N-Terminal Domain
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09228 Å
Deposited: 2018-11-30
Authors: Huck, J.D., Que, N.L.S., Gewirth, D.T.
PDB entry 6n8x: Hsp90-alpha bound to PU-11-trans
Classification: chaperone/chaperone inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49484 Å
Deposited: 2018-11-30
Authors: Huck, J.D., Que, N.L.S., Gewirth, D.T.
PDB entry 6n8y: Hsp90-beta bound to PU-11-trans
Classification: chaperone/chaperone inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55391 Å
Deposited: 2018-11-30
Authors: Huck, J.D., Que, N.L.S., Gewirth, D.T.
PDB entry 6n8z: HSP104DWB extended conformation
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2018-11-30
Authors: Lee, S., Rho, S.H., Lee, J., Sung, N., Liu, J., Tsai, F.T.F.
PDB entry 6n90: YoeB/ParE toxin from Agrobacterium tumefaciens
Classification: TOXIN
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.755 Å
Deposited: 2018-11-30
Authors: Bourne, C.R., Reddem, E.R.
PDB entry 6n91: Crystal Structure of Adenosine Deaminase from Vibrio cholerae Complexed with Pentostatin (Deoxycoformycin)
Classification: HYDROLASE
Source organism: Vibrio cholerae O1 biovar El Tor str. N16961
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-11-30
Authors: Maltseva, N., Kim, Y., Endres, M., Welk, L., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6n92: Methylmalonyl-CoA decarboxylase in complex with 2-nitronate-propionyl-CoA
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-11-30
Authors: Stunkard, L.M., Dixon, A.D., Huth, T.J., Lohman, J.R.
PDB entry 6n93: Methylmalonyl-CoA decarboxylase in complex with 2-nitronate-propionyl-oxa(dethia)-CoA
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-11-30
Authors: Stunkard, L.M., Dixon, A.D., Huth, T.J., Lohman, J.R.
PDB entry 6n94: Methylmalonyl-CoA decarboxylase in complex with 2-nitronate-propionyl-amino(dethia)-CoA
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-11-30
Authors: Stunkard, L.M., Dixon, A.D., Huth, T.J., Lohman, J.R.
PDB entry 6n95: Methylmalonyl-CoA decarboxylase in complex with 2-sulfonate-propionyl-CoA
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.798 Å
Deposited: 2018-11-30
Authors: Stunkard, L.M., Dixon, A.D., Huth, T.J., Lohman, J.R.
PDB entry 6n96: Methylmalonyl-CoA decarboxylase in complex with 2-sulfonate-propionyl-oxa(dethia)-CoA
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-11-30
Authors: Stunkard, L.M., Dixon, A.D., Huth, T.J., Lohman, J.R.
PDB entry 6n97: Methylmalonyl-CoA decarboxylase in complex with 2-sulfonate-propionyl-amino(dethia)-CoA
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-11-30
Authors: Stunkard, L.M., Dixon, A.D., Huth, T.J., Lohman, J.R.
PDB entry 6n98: Xylose isomerase 1F1 variant from Streptomyces sp. F-1
Classification: ISOMERASE
Source organism: Streptomyces sp. F-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-12-01
Authors: Miyamoto, R.Y., Vieira, P.S., Murakami, M.T., Zanphorlin, L.M.
PDB entry 6n99: Xylose isomerase 2F1 variant from Streptomyces sp. F-1
Classification: ISOMERASE
Source organism: Streptomyces sp. F-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-12-01
Authors: Miyamoto, R.Y., Vieira, P.S., Murakami, M.T., Zanphorlin, L.M.
PDB entry 6n9a: Crystal Structure of Thermotoga maritima threonylcarbamoyladenosine biosynthesis complex TsaB2D2E2 bound to ATP and carboxy-AMP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-12-01
Authors: Swairjo, M.A., Stec, B.
PDB entry 6n9b: FtsY-NG ultra high-resolution
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.219 Å
Deposited: 2018-12-02
Authors: Ataide, S.F., Faoro, C.
PDB entry 6n9d: Complex of tissue inhibitor of metalloproteinases-1 (TIMP-1) mutant (L34G/L133P/L151C/G154A) with matrix metalloproteinase-3 catalytic domain (MMP-3cd)
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2018-12-03
Authors: Raeeszadeh-Sarmazdeh, M., Radisky, E.S., Sankaran, B.
PDB entry 6n9e: Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2018-12-03
Authors: Melnikov, S.V., Khabibullina, N.F., Mairhofer, E., Vargas-Rodriguez, O., Reynolds, N.M., Micura, R., Soll, D., Polikanov, Y.S.
PDB entry 6n9f: Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2018-12-03
Authors: Melnikov, S.V., Khabibullina, N.F., Mairhofer, E., Vargas-Rodriguez, O., Reynolds, N.M., Micura, R., Soll, D., Polikanov, Y.S.
PDB entry 6n9g: Crystal Structure of RGS7-Gbeta5 dimer
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.129 Å
Deposited: 2018-12-03
Authors: Patil, D.N., Rangarajan, E., Izard, T., Martemyanov, K.A.
PDB entry 6n9h: De novo designed homo-trimeric amantadine-binding protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.039 Å
Deposited: 2018-12-03
Authors: Park, J., Baker, D.
PDB entry 6n9i: Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus - free
Classification: HYDROLASE
Source organism: Parageobacillus caldoxylosilyticus NBRC 107762
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-12-03
Authors: Bergonzi, C., Schwab, M., Elias, M.
PDB entry 6n9j: X-ray structure of a secreted C11 cysteine protease from Bacteroides thetaiotaomicron in complex with an irreversible peptide inhibitor
Classification: hydrolase/hydrolase inhibitor
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2018-12-03
Authors: Wolan, D.W., Gonzalez-Paez, G.E., Roncase, E.J.
PDB entry 6n9k: Beta-lactamase from Escherichia coli str. Sakai
Classification: LIGASE
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-12-03
Authors: Osipiuk, J., Wu, R., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6n9l: Crystal structure of T. maritima UvrA d117-399 with ADP
Classification: DNA BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2018-12-03
Authors: Hartley, S., Case, B., Osuga, M., Hingorani, M.M., Jeruzalmi, D.
PDB entry 6n9m: Crystal Structure of Adenosine Deaminase from Salmonella typhimurium with Pentostatin (Deoxycoformycin)
Classification: HYDROLASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.449 Å
Deposited: 2018-12-03
Authors: Maltseva, N., Kim, Y., Grimshaw, S., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6n9n: Crystal structure of murine GSDMD
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2018-12-03
Authors: Liu, Z., Wang, C., Yang, J., Xiao, T.S.
PDB entry 6n9o: Crystal structure of human GSDMD
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-12-03
Authors: Liu, Z., Wang, C., Yang, J., Xiao, T.S.
PDB entry 6n9p: Discovery of affinity-based probes for Btk occupancy assay
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2018-12-03
Authors: Mochalkin, I.
PDB entry 6n9q: Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus bind to substrate C4-AHL
Classification: HYDROLASE
Source organism: Parageobacillus caldoxylosilyticus NBRC 107762
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2018-12-03
Authors: Bergonzi, C., Schwab, M., Elias, M.
PDB entry 6n9r: Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus bound to substrate 3-oxo-C12-AHL
Classification: HYDROLASE
Source organism: Parageobacillus caldoxylosilyticus NBRC 107762
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-12-03
Authors: Bergonzi, C., Schwab, M., Elias, M.
PDB entry 6n9t: Structure of a peptide-based photo-affinity cross-linker with Herceptin Fc
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.576 Å
Deposited: 2018-12-04
Authors: Sadowsky, J., Ultsch, M., Vance, N., Wang, W.
PDB entry 6n9u: Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) interacting with primase domains of two gp4 subunits bound to an RNA/DNA hybrid and dTTP (from LagS1)
Classification: HYDROLASE,TRANSFERASE/DNA
Source organism: Enterobacteria phage T7; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2018-12-04
Authors: Gao, Y., Fox, T., Val, N., Yang, W.
PDB entry 6n9v: Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS1)
Classification: HYDROLASE,TRANSFERASE/DNA
Source organism: Enterobacteria phage T7; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2018-12-04
Authors: Gao, Y., Fox, T., Val, N., Yang, W.
PDB entry 6n9w: Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS2)
Classification: HYDROLASE,TRANSFERASE/DNA
Source organism: Enterobacteria phage T7; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2018-12-04
Authors: Gao, Y., Cui, Y., Zhou, Z., Yang, W.
PDB entry 6n9x: Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS3)
Classification: HYDROLASE,TRANSFERASE/DNA
Source organism: Enterobacteria phage T7; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2018-12-04
Authors: Gao, Y., Fox, T., Val, N., Yang, W.
PDB entry 6n9y: Atomic structure of Non-Structural protein 1 of bluetongue virus
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus 23
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2018-12-04
Authors: Kerviel, A., Ge, P., Lai, M., Jih, J., Boyce, M., Zhang, X., Zhou, Z.H., Roy, P.
PDB entry 6na3: Crystal Structure of Apo-form of ECR
Classification: OXIDOREDUCTASE
Source organism: Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-12-05
Authors: DeMirci, H.
PDB entry 6na4: Co crystal structure of ECR with Butryl-CoA
Classification: OXIDOREDUCTASE
Source organism: Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.722 Å
Deposited: 2018-12-05
Authors: DeMirci, H.
PDB entry 6na5: Crystal Structure of ECR in complex with NADP+
Classification: OXIDOREDUCTASE
Source organism: Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-12-05
Authors: DeMirci, H.
PDB entry 6na6: Serial Femtosecond X-ray Crystallography Structure of ECR in complex with NADPH
Classification: OXIDOREDUCTASE
Source organism: Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-12-05
Authors: DeMirci, H.
PDB entry 6nab: Crystal structure of prolyl-tRNA synthetase from Naegleria fowleri in complex with proline and adenosine monophophsphate (AMP)
Classification: LIGASE
Source organism: Naegleria fowleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nac: Crystal structure of [FeFe]-hydrogenase I (CpI) solved with single pulse free electron laser data
Classification: OXIDOREDUCTASE
Source organism: Clostridium pasteurianum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-12-05
Authors: Cohen, A.E., Davidson, C.M., Zadvornyy, O.A., Keable, S.M., Lyubimov, A.Y., Song, J., McPhillips, S.E., Soltis, S.M., Peters, J.W.
PDB entry 6nad: Identification and biological evaluation of tertiary ALCOHOL-based inverse agonists of RORgt
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.90197 Å
Deposited: 2018-12-05
Authors: Spurlino, J., Milligan, C.
PDB entry 6nae: Crystal Structure of Ebola zaire GP protein with bound ARN0074898
Classification: VIRAL PROTEIN
Source organism: Zaire ebolavirus (strain Mayinga-76)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2018-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6naf: De novo designed homo-trimeric amantadine-binding protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2018-12-05
Authors: Selvaraj, B., Park, J., Cuneo, M.J., Myles, D.A.A., Baker, D.
PDB entry 6nag: X-ray structure of a secreted C11 cysteine protease from Bacteroides thetaiotaomicron "iotapain
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.683 Å
Deposited: 2018-12-05
Authors: Wolan, D.W., Gonzalez-Paez, G.E., Roncase, E.J.
PDB entry 6nah: Crystal structure of Neisseria meningitidis ClpP protease in complex with Acyldepsipeptide-14 (ADEP-14)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Neisseria meningitidis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-12-05
Authors: Mabanglo, M.F., Houry, W.A.
PDB entry 6naj: Integrin AlphaVBeta3 ectodomain bound to Hr10 variant of the 10th domain of Fibronectin.
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-12-05
Authors: van Agthoven, J., Arnaout, M.A.
PDB entry 6nak: BACTERIAL PROTEIN COMPLEX TM BDE complex
Classification: RNA BINDING PROTEIN
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2018-12-05
Authors: Stec, B.
PDB entry 6nal: Crystal Structure of Gram Negative Toxin
Classification: TOXIN
Source organism: Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-12-05
Authors: Morton, C.J., Lawrence, S.A., Parker, M.W.
PDB entry 6nan: NMR structure determination of Ixolaris and Factor X interaction reveals a noncanonical mechanism of Kunitz inhibition
Classification: BLOOD CLOTTING
Source organism: Ixodes scapularis
Experimental method: SOLUTION NMR
Deposited: 2018-12-06
Authors: De Paula, V.S., Sgourakis, N.G., Francischetti, I.M.B., Almeida, F.C.L., Monteiro, R.Q., Valente, A.P.
PDB entry 6nao: Discovery of a high affinity inhibitor of cGAS
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.23 Å
Deposited: 2018-12-06
Authors: Hall, J.
PDB entry 6naq: Crystal structure of Neisseria meningitidis ClpP protease in Apo form
Classification: HYDROLASE
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.022 Å
Deposited: 2018-12-06
Authors: Houry, W.A., Mabanglo, M.F., Pai, E.F., Eger, B.T., Bryson, S.
PDB entry 6nas: Ternary Complex of Ac-Alpha-Actin with Profilin and AcCoA-NAA80
Classification: STRUCTURAL PROTEIN/TRANSFERASE
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-12-06
Authors: Rebowski, G., Boczkowska, M., Dominguez, R.
PDB entry 6nau: 1.55 Angstrom Resolution Crystal Structure of 6-phosphogluconolactonase from Klebsiella pneumoniae
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-12-06
Authors: Minasov, G., Shuvalova, L., Pshenychnyi, S., Dubrovska, I., Anderson, W.F., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6nav: Cryo-EM reconstruction of Sulfolobus islandicus LAL14/1 Pilus
Classification: STRUCTURAL PROTEIN
Source organism: Sulfolobus islandicus LAL14/1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2018-12-06
Authors: Wang, F., Cvirkaite-Krupovic, V., Prangishvili, D., Krupovic, M., Egelman, E.H.
PDB entry 6naw: Crystal structure of Neisseria meningitidis ClpP E58A activated mutant
Classification: HYDROLASE
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.399 Å
Deposited: 2018-12-06
Authors: Mabanglo, M.F., Houry, W.A.
PDB entry 6nax: Olfactomedin domain of mouse myocilin
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.551 Å
Deposited: 2018-12-06
Authors: Patterson-Orazem, A.C., Hill, S.E., Lieberman, R.L.
PDB entry 6nay: Crystal structure of Neisseria meningitidis ClpP protease E31A+E58A activated double mutant
Classification: HYDROLASE
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2018-12-06
Authors: Mabanglo, M.F., Houry, W.A.
PDB entry 6naz: Crystal structure of DIRAS 2/3 chimera in complex with GDP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.081 Å
Deposited: 2018-12-06
Authors: Gilbert, Y.H., Reger, A., Sharma, R., Bast, J., Kim, C.
PDB entry 6nb0: Crystal structure of Histidine kinase from Burkholderia phymatum STM815
Classification: TRANSFERASE
Source organism: Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-12-06
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nb1: Crystal structure of Escherichia coli ClpP protease complexed with small molecule activator, ACP1-06
Classification: HYDROLASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-12-06
Authors: Mabanglo, M.F., Houry, W.A., Eger, B.T., Bryson, S., Pai, E.F.
PDB entry 6nb2: CRYSTAL STRUCTURE OF ENOLASE FROM LEGIONELLA PNEUMOPHILA BOUND TO 2-PHOSPHOGLYCERIC ACID AND MAGNESIUM
Classification: LYASE
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-12-06
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nb3: MERS-CoV complex with human neutralizing LCA60 antibody Fab fragment (state 1)
Classification: VIRUS
Source organism: Homo sapiens; Middle East respiratory syndrome-related coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2018-12-06
Authors: Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nb4: MERS-CoV S complex with human neutralizing LCA60 antibody Fab fragment (state 2)
Classification: VIRUS
Source organism: Homo sapiens; Middle East respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2018-12-06
Authors: Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nb5: Crystal structure of anti- MERS-CoV human neutralizing LCA60 antibody Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2018-12-06
Authors: Walls, A.J., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, J., Quispe, J., Cameroni, E., Gopal, R., Dai, M., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nb6: SARS-CoV complex with human neutralizing S230 antibody Fab fragment (state 1)
Classification: VIRUS
Source organism: Homo sapiens; SARS coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2018-12-06
Authors: Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nb7: SARS-CoV complex with human neutralizing S230 antibody Fab fragment (state 2)
Classification: VIRUS
Source organism: Homo sapiens; SARS coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2018-12-06
Authors: Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nb8: Crystal structure of anti- SARS-CoV human neutralizing S230 antibody Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-12-06
Authors: Walls, A.J., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, J., Quispe, J., Cameroni, E., Gopal, R., Dai, M., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nb9: Amyloid-Beta (20-34) with L-isoaspartate 23
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.05 Å
Deposited: 2018-12-06
Authors: Sawaya, M.R., Warmack, R.A., Boyer, D.R., Zee, C.T., Richards, L.S., Cascio, D., Gonen, T., Clarke, S.G., Eisenberg, D.S.
PDB entry 6nba: Crystal structure of Human Cystathionine gamma lyase with S-3-Carboxpropyl-L-Cysteine
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.495 Å
Deposited: 2018-12-06
Authors: Kim, H., Yadav, P.K., Banerjee, R., Cho, U.-S.
PDB entry 6nbb: Horse liver alcohol dehydrogenase determined using single-particle cryo-EM at 200 keV
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2018-12-06
Authors: Herzik Jr., M.A., Wu, M., Lander, G.C.
PDB entry 6nbc: human methemoglobin state 1 determined using single-particle cryo-EM at 200 keV
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2018-12-06
Authors: Herzik Jr., M.A., Wu, M., Lander, G.C.
PDB entry 6nbd: Human methemoglobin state 2 determined using single-particle cryo-EM at 200 keV
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2018-12-06
Authors: Herzik Jr., M.A., Wu, M., Lander, G.C.
PDB entry 6nbe: Ternary Complex of Ac-Alpha-Actin with Profilin and CoA-NAA80
Classification: STRUCTURAL PROTEIN/TRANSFERASE
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-12-07
Authors: Rebowski, G., Boczkowska, M., Dominguez, R.
PDB entry 6nbf: Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2018-12-07
Authors: Zhao, L.-H., Ma, S., Sutkeviciute, I., Shen, D.-D., Zhou, X.E., de Waal, P.P., Li, C.-Y., Kang, Y., Clark, L.J., Jean-Alphonse, F.G., White, A.D., Xiao, K., Yang, D., Jiang, Y., Watanabe, T., Gardella, T.J., Melcher, K., Wang, M.-W., Vilardaga, J.-P., Xu, H.E., Zhang, Y.
PDB entry 6nbg: 2.05 Angstrom Resolution Crystal Structure of Hypothetical Protein KP1_5497 from Klebsiella pneumoniae.
Classification: UNKNOWN FUNCTION
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-12-07
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Dubrovska, I., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6nbh: Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2018-12-07
Authors: Zhao, L.-H., Ma, S., Sutkeviciute, I., Shen, D.-D., Zhou, X.E., de Waal, P.P., Li, C.-Y., Kang, Y., Clark, L.J., Jean-Alphonse, F.G., White, A.D., Xiao, K., Yang, D., Jiang, Y., Watanabe, T., Gardella, T.J., Melcher, K., Wang, M.-W., Vilardaga, J.-P., Xu, H.E., Zhang, Y.
PDB entry 6nbi: Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2018-12-07
Authors: Zhao, L.-H., Ma, S., Sutkeviciute, I., Shen, D.-D., Zhou, X.E., de Waal, P.P., Li, C.-Y., Kang, Y., Clark, L.J., Jean-Alphonse, F.G., White, A.D., Xiao, K., Yang, D., Jiang, Y., Watanabe, T., Gardella, T.J., Melcher, K., Wang, M.-W., Vilardaga, J.-P., Xu, H.E., Zhang, Y.
PDB entry 6nbj: Qri7
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2018-12-07
Authors: Stec, B.
PDB entry 6nbk: Crystal structure of Arginase from Bacillus cereus
Classification: HYDROLASE
Source organism: Bacillus thuringiensis DB27
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2018-12-07
Authors: Chang, C., Evdokimova, E., Mcchesney, M., Joachimiak, A., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6nbl: Cytochrome P450cam-putidaredoxin complex bound to camphor and cyanide
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-12-07
Authors: Follmer, A.H., Tripathi, S.M., Poulos, T.L.
PDB entry 6nbm: CRYSTAL STRUCTURE OF ENOLASE FROM LEGIONELLA PNEUMOPHILA BOUND TO PHOSPHATE AND MAGNESIUM
Classification: LYASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-12-07
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nbn: Structure of Aedes aegypti OBP22 in the complex with arachidonic acid
Classification: TRANSPORT PROTEIN
Source organism: Aedes aegypti
Experimental method: SOLUTION NMR
Deposited: 2018-12-07
Authors: Jones, D.N., Wang, J.
PDB entry 6nbo: Crystal structure of N-isopropylammelide isopropylaminohydrolase from Burkholderia multivorans ATCC 17616
Classification: HYDROLASE
Source organism: Burkholderia multivorans ATCC 17616
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-12-07
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nbp: Crystal Structure of a Sugar N-Formyltransferase from the Plant Pathogen Pantoea ananatis
Classification: TRANSFERASE
Source organism: Pantoea ananatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-12-09
Authors: Hofmeister, D.L., Thoden, J.B., Holden, H.M.
PDB entry 6nbq: T.elongatus NDH (data-set 1)
Classification: OXIDOREDUCTASE
Source organism: Thermosynechococcus elongatus (strain BP-1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2018-12-09
Authors: Laughlin, T.G., Bayne, A., Trempe, J.-F., Savage, D.F., Davies, K.M.
PDB entry 6nbr: Crystal Structure of Piper methysticum Kavalactone Reductase 1 in complex with NADP
Classification: TRANSFERASE
Source organism: Piper methysticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-12-09
Authors: Pluskal, T., Weng, J.K.
PDB entry 6nbs: WT ERK2 with compound 2507-8
Classification: Transferase/Transferase Inhibitor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-12-10
Authors: Sammons, R.M., Perry, N.A., Cho, E.J., Kaoud, T.S., Zamora-Olivares, D.P., Piserchio, A., Houghten, R.A., Giulianotti, M., Li, Y., Debevec, G., Gurevich, V.V., Ghose, R., Iverson, T.M., Dalby, K.N.
PDB entry 6nbt: CRISPR Complex Subunit Csm3 from Staphylococcus epidermidis RP62a
Classification: RNA BINDING PROTEIN
Source organism: Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-12-10
Authors: Dorsey, B.W., Mondragon, A.
PDB entry 6nbu: CRISPR Complex Subunit Csm2 from Staphylococcus epidermidis RP62a
Classification: STRUCTURAL PROTEIN
Source organism: Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2018-12-10
Authors: Dorsey, B.W., Huang, L., Mondragon, A.
PDB entry 6nbw: Ternary Complex of Beta/Gamma-Actin with Profilin and AnCoA-NAA80
Classification: STRUCTURAL PROTEIN/TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-12-10
Authors: Rebowski, G., Boczkowska, M., Dominguez, R.
PDB entry 6nbx: T.elongatus NDH (data-set 2)
Classification: OXIDOREDUCTASE
Source organism: Thermosynechococcus elongatus (strain BP-1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2018-12-10
Authors: Laughlin, T.G., Bayne, A., Trempe, J.-F., Savage, D.F., Davies, K.M.
PDB entry 6nby: T.elongatus NDH (composite model)
Classification: OXIDOREDUCTASE
Source organism: Thermosynechococcus elongatus BP-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2018-12-10
Authors: Laughlin, T.G., Bayne, A., Trempe, J.-F., Savage, D.F., Davies, K.M.
PDB entry 6nc1: FtsY-NG high-resolution
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.598 Å
Deposited: 2018-12-10
Authors: Ataide, S.F., Faoro, C.
PDB entry 6nc2: AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody ACS202 fragment antigen binding
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2018-12-10
Authors: Cottrell, C.A., Ozorowski, G., Yuan, M., Copps, J., Wilson, I.A., Ward, A.B.
PDB entry 6nc3: AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody VRC34 fragment antigen binding
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2018-12-10
Authors: Cottrell, C.A., Ozorowski, G., Torres, J.L., Ward, A.B.
PDB entry 6nc4: FtsY-NG high-resolution
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-12-10
Authors: Ataide, S.F., Faoro, C.
PDB entry 6nc5: Cronobacter sakazakii (Enterobacter sakazakii) Metallo-beta-lactamse HARLDQ motif
Classification: HYDROLASE
Source organism: Cronobacter sakazakii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.074 Å
Deposited: 2018-12-10
Authors: Monteiro Pedroso, M., Waite, D., Natasa, M., McGeary, R., Guddat, L., Hugenholtz, P., Schenk, G.
PDB entry 6nc6: Lipid II flippase MurJ, inward closed conformation
Classification: TRANSPORT PROTEIN
Source organism: Thermosipho africanus (strain TCF52B)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-12-10
Authors: Kuk, A.C.Y., Lee, S.-Y.
PDB entry 6nc7: Lipid II flippase MurJ, inward open conformation
Classification: TRANSPORT PROTEIN
Source organism: Thermosipho africanus (strain TCF52B)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2018-12-11
Authors: Kuk, A.C.Y., Lee, S.-Y.
PDB entry 6nc8: Lipid II flippase MurJ, inward occluded conformation
Classification: TRANSPORT PROTEIN
Source organism: Thermosipho africanus (strain TCF52B)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2018-12-11
Authors: Kuk, A.C.Y., Lee, S.-Y.
PDB entry 6nc9: Lipid II flippase MurJ, outward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Thermosipho africanus (strain TCF52B)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-12-11
Authors: Kuk, A.C.Y., Lee, S.-Y.
PDB entry 6nca: HLA-A2 (A*02:01) bound to a peptide from the Epstein-Barr virus BRLF1 protein
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2018-12-11
Authors: Stern, L.J., Selin, L.K., Song, I.Y.
PDB entry 6nce: Crystal structure of the human FOXN3 DNA binding domain in complex with a forkhead DNA sequence
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.598 Å
Deposited: 2018-12-11
Authors: Rogers, J.M., Jarrett, S.M., Seegar, T.C., Waters, C.T., Hallworth, A.N., Blacklow, S.C., Bulyk, M.L.
PDB entry 6ncf: The structure of Stable-5-Lipoxygenase bound to AKBA
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.871 Å
Deposited: 2018-12-11
Authors: Newcomer, M.E., Gilbert, N.C., Neau, D.B.
PDB entry 6ncg: Crystal Structure of Human Vaccinia-related kinase 2 (VRK-2) bound to pyridin-benzenesulfonamide inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2018-12-11
Authors: dos Reis, C.V., Chiodi, C.G., de Souza, G.P., Guimaraes, C., Mascarello, A., Gama, F., Ferreira, M., Counago, R.M., Massirer, K.B., Elkins, J.M., Arruda, P., Edwards, A.M., Structural Genomics Consortium (SGC)
PDB entry 6nch: Crystal structure of CDP-Chase: Raster data collection
Classification: HYDROLASE
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-12-11
Authors: Miller, M.S., Shi, W., Gabelli, S.B.
PDB entry 6nci: Crystal structure of CDP-Chase: Vector data collection
Classification: HYDROLASE
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2018-12-11
Authors: Miller, M.S., Shi, W., Gabelli, S.B.
PDB entry 6ncj: Structure of HIV-1 Integrase with potent 5,6,7,8-Tetrahydro-1,6-naphthyridine Derivatives Allosteric Site Inhibitors
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-12-11
Authors: Nolte, R.T.
PDB entry 6nck: Crystal structure of H108A peptidylglycine alpha-hydroxylating monooxygenase (PHM)
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-12-11
Authors: Miller, M.S., Maheshwari, S., Gabelli, S.B.
PDB entry 6ncl: Near-atomic structure of icosahedrally averaged PBCV-1 capsid
Classification: VIRUS
Source organism: Paramecium bursaria Chlorella virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2018-12-11
Authors: Fang, Q., Rossmann, M.G.
PDB entry 6ncm: Crystal structure of the human FOXN3 DNA binding domain in complex with a forkhead-like (FHL) DNA sequence
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.704 Å
Deposited: 2018-12-11
Authors: Rogers, J.M., Jarrett, S.M., Seegar, T.C., Waters, C.T., Hallworth, A.N., Blacklow, S.C., Bulyk, M.L.
PDB entry 6ncn: Fragment-based Discovery of an apoE4 Stabilizer
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2018-12-11
Authors: Jakob, C.G., Qiu, W.
PDB entry 6nco: Fragment-based Discovery of an apoE4 Stabilizer
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.707 Å
Deposited: 2018-12-11
Authors: Jakob, C.G., Qiu, W.
PDB entry 6ncp: Crystal structure of HIV-1 broadly neutralizing antibody ACS202
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2018-12-11
Authors: Yuan, M., Wilson, I.A.
PDB entry 6ncq: The dimerization domain of human SFPQ in space group C2221
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-12-12
Authors: Lee, M.
PDB entry 6ncr: Crystal Structure of Tryptophan-tRNA ligase from Chlamydia trachomatis with bound L-tryptophan
Classification: LIGASE
Source organism: Chlamydia trachomatis (strain D/UW-3/Cx)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-12-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6ncs: Crystal structure of N-acetylneuraminic acid (Sialic acid) synthetase from Leptospira borgpetersenii serovar Hardjo-bovis in complex with citrate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-12-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nct: Structure of p110alpha/niSH2 - vector data collection
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2018-12-12
Authors: Miller, M.S., Maheshwari, S., Amzel, L.M., Gabelli, S.B.
PDB entry 6ncu: Interleukin-37 residues 53-206- dimer
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-12-12
Authors: Eisenmesser, E.Z.
PDB entry 6ncv: Cryo-EM structure of NLRP6 PYD filament
Classification: SIGNALING PROTEIN, PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2018-12-12
Authors: Shen, C., Fu, T.M., Wu, H.
PDB entry 6ncw: Crystal structure of a GH2 beta-galacturonidase from Eisenbergiella tayi bound to glycerol
Classification: HYDROLASE
Source organism: Eisenbergiella tayi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-12-12
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6ncx: Crystal structure of GH2 beta-galacturonidase from Eisenbergiella tayi bound to galacturonate
Classification: HYDROLASE
Source organism: Eisenbergiella tayi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2018-12-12
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6ncy: Crystal structure of hybrid beta-glucuronidase/beta-galacturonidase from Fusicatenibacter saccharivorans
Classification: HYDROLASE
Source organism: Fusicatenibacter saccharivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-12-12
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6ncz: Crystal structure of hybrid beta-glucuronidase/beta-galacturonidase from Fusicatenibacter saccharivorans bound to phenyl-thio-beta-D-glucuronide
Classification: HYDROLASE
Source organism: Fusicatenibacter saccharivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-12-12
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6nd0: human BK channel reconstituted into liposomes
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2018-12-13
Authors: Wang, L., Tonggu, L.
PDB entry 6nd1: CryoEM structure of the Sec Complex from yeast
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2018-12-13
Authors: Wu, X., Cabanos, C., Rapoport, T.A.
PDB entry 6nd2: Staphylococcus aureus Dihydrofolate Reductase complexed with NADPH and 6-ETHYL-5-[(3R)-3-[2-METHOXY-5-(PYRIDIN-4-YL)PHENYL]BUT-1-YN-1-YL]PYRIMIDINE-2,4-DIAMINE (UCP1063)
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.243 Å
Deposited: 2018-12-13
Authors: Reeve, S.M., Wright, D.L.
PDB entry 6nd3: wild-type choline TMA lyase in complex with betaine aldehyde
Classification: LYASE
Source organism: Desulfovibrio alaskensis (strain G20)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.364 Å
Deposited: 2018-12-13
Authors: Funk, M.A., Drennan, C.L.
PDB entry 6nd4: Conformational switches control early maturation of the eukaryotic small ribosomal subunit
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae BY4741
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2018-12-13
Authors: Hunziker, M., Barandun, J., Klinge, S.
PDB entry 6nd5: Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-12-13
Authors: Svetlov, M.S., Plessa, E., Chen, C.-W., Bougas, A., Krokidis, M.G., Dinos, G.P., Polikanov, Y.S.
PDB entry 6nd6: Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2018-12-13
Authors: Svetlov, M.S., Plessa, E., Chen, C.-W., Bougas, A., Krokidis, M.G., Dinos, G.P., Polikanov, Y.S.
PDB entry 6nd7: The crystal structure of TerB co-crystallized with polyporic acid
Classification: OXIDOREDUCTASE
Source organism: Streptomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2018-12-13
Authors: Clinger, J.A., Elshahawi, S.I., Zhang, Y., Hall, R.P., Liu, Y., Thorson, J.S., Phillips Jr., G.N.
PDB entry 6nd8: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND BARIUM
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
PDB entry 6nd9: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH CALCIUM
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
PDB entry 6nda: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND CADMIUM
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
PDB entry 6ndb: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND COBALT
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
PDB entry 6ndc: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH CHROMIUM BOUND
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
PDB entry 6ndd: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH MANGANESE BOUND
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
PDB entry 6nde: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH PRASEDYMIUM
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
PDB entry 6ndf: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH STRONTIUM
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
PDB entry 6ndg: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH YTTRIUM BOUND
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.
PDB entry 6ndh: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND ZINC
Classification: CELL ADHESION/TOXIN
Source organism: Calloselasma rhodostoma; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-12-13
Authors: Stetefeld, J., McDougall, M.D., Loewen, P.C.