LiteFold/PDB huggingface dataset:
PDB entry 5dm6: Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans
Classification: RIBOSOME
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-09-08
Authors: Kaminishi, T., Schedlbauer, A., Ochoa-Lizarralde, B., Connell, S.R., Fucini, P.
PDB entry 5dm7: Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin A
Classification: RIBOSOME
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-09-08
Authors: Kaminishi, T., Schedlbauer, A., Ochoa-Lizarralde, B., Connell, S.R., Fucini, P.
PDB entry 5dm9: XFEL structure of hen egg-white lysozyme solved using a droplet injector at SACLA
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-08
Authors: Kobayashi, J., Nango, E.
PDB entry 5dma: Crystal structure of C-terminal tudor domain in PcrA/UvrD helicase
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2015-09-08
Authors: Lin, C.L., Dillingham, M., Wigley, D.
PDB entry 5dmb: Crystal structure of a translational regulator bound to a flagellar assembly factor
Classification: TRANSLATION
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2015-09-08
Authors: Altegoer, F., Bange, G.
PDB entry 5dmc: Crystal Structure of the ER-alpha Ligand-binding Domain in complex with a nitrile-substituted triaryl-ethylene derivative 3,3-bis(4-hydroxyphenyl)-2-phenylprop-2-enenitrile
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.403 Å
Deposited: 2015-09-08
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dmd: Crystal structure of the flagellar assembly factor FliW
Classification: TRANSLATION
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2015-09-08
Authors: Altegoer, F., Bange, G.
PDB entry 5dmf: Crystal Structure of the ER-alpha Ligand-binding Domain in complex with a 4-fluorophenylamino-substituted, methyl triaryl-ethylene derivative 4,4'-(2-{3-[(4-fluorophenyl)amino]phenyl}prop-1-ene-1,1-diyl)diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-08
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dmg: X-RAY STRUCTURE OF THE FAB FRAGMENT OF THE ANTI TAU ANTIBODY RB86 IN COMPLEX WITH THE PHOSPHORYLATED TAU PEPTIDE (416-430)
Classification: IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-08
Authors: Benz, J., Lorenz, S., Georges, G., Jochner, A., Goepfert, U., Grueninger, F., Bujotzek, A.
PDB entry 5dmh: Crystal structure of a domain of unknown function (DUF1537) from Ralstonia eutropha H16 (H16_A1561), Target EFI-511666, complex with ADP.
Classification: UNKNOWN FUNCTION
Source organism: Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-09-08
Authors: Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 5dmi: Structure of the extracellular domain of the CD40 in complex with CHI220 FAB
Classification: IMMUNE SYSTEM/SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus, Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.69 Å
Deposited: 2015-09-08
Authors: Sheriff, S.
PDB entry 5dmj: Structure of the extracellular domain of the CD40 in complex with 3H56-5 DAB
Classification: IMMUNE SYSTEM/SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2015-09-08
Authors: Sheriff, S.
PDB entry 5dmk: Crystal Structure of IAg7 in complex with RLGL-WE14
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2015-09-08
Authors: Wang, Y., Jin, N., Dai, S., Kappler, J.W.
PDB entry 5dml: Crystal Structure of the Homocysteine Methyltransferase MmuM from Escherichia coli, Oxidized form
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.452 Å
Deposited: 2015-09-09
Authors: Li, K., Li, G., Bradbury, L.M.T., Andrew, H.D., Bruner, S.D.
PDB entry 5dmm: Crystal Structure of the Homocysteine Methyltransferase MmuM from Escherichia coli, Metallated form
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.779 Å
Deposited: 2015-09-09
Authors: Li, K., Li, G., Bradbury, L.M.T., Andrew, H.D., Bruner, S.D.
PDB entry 5dmn: Crystal Structure of the Homocysteine Methyltransferase MmuM from Escherichia coli, Apo form
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.892 Å
Deposited: 2015-09-09
Authors: Li, K., Li, G., Bradbury, L.M.T., Andrew, H.D., Bruner, S.D.
PDB entry 5dmp: Structure of the Archaeal NHEJ Phosphoesterase from Methanocella paludicola.
Classification: HYDROLASE
Source organism: Methanocella paludicola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.793 Å
Deposited: 2015-09-09
Authors: Brissett, N.C., Bartlett, E.J., Doherty, A.J.
PDB entry 5dmq: Crystal structure of mouse eRF1 in complex with Reverse Transcriptase (RT) of Moloney Murine Leukemia Virus
Classification: TRANSFERASE, HYDROLASE/TRANSLATION
Source organism: Moloney murine leukemia virus (isolate Shinnick); Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2015-09-09
Authors: Tang, T., Song, H.
PDB entry 5dmr: Crystal Structure of C-terminal domain of mouse eRF1 in complex with RNase H domain of RT of Moloney Murine Leukemia Virus
Classification: HYDROLASE/TRANSLATION
Source organism: Moloney murine leukemia virus (isolate Shinnick); Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-09-09
Authors: Tang, X., Song, H.
PDB entry 5dms: Mouse Polo-box domain and Emi2 (169-177)
Classification: TRANSFERASE/METAL BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89999 Å
Deposited: 2015-09-09
Authors: Namgoong, S.
PDB entry 5dmu: Structure of the NHEJ polymerase from Methanocella paludicola
Classification: TRANSFERASE
Source organism: Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.949 Å
Deposited: 2015-09-09
Authors: Brissett, N.C., Bartlett, E.J., Doherty, A.J.
PDB entry 5dmv: Polo-box domain of Mouse Polo-like kinase 1 complexed with Emi2 (146-177)
Classification: TRANSFERASE/METAL BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.499 Å
Deposited: 2015-09-09
Authors: Namgoong, S.
PDB entry 5dmx: Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii, space group p212121
Classification: LIGASE
Source organism: Acinetobacter baumannii ACICU
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2015-09-09
Authors: Huynh, K.H., Hong, M.K., Kang, L.W.
PDB entry 5dmy: Beta-galactosidase - construct 33-930
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-09-09
Authors: Watson, K.A., Lazidou, A.
PDB entry 5dmz: Structure of human Bub1 kinase domain phosphorylated at Ser969
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-09
Authors: Breit, C., Weir, J.R., Musacchio, A.
PDB entry 5dn0: t1555 loop variant
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 4.4 Å
Deposited: 2015-09-09
Authors: MacDonald, J.T., Kabasakal, B.V., Murray, J.W.
PDB entry 5dn1: Crystal structure of Phosphoribosyl isomerase A from Streptomyces coelicolor
Classification: ISOMERASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.953 Å
Deposited: 2015-09-09
Authors: Chang, C., Verduzco-Castro, E.A., Endres, M., Barona-Gomez, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 5dn2: Human NRP2 b1 domain in complex with the peptide corresponding to the C-terminus of VEGF-A
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-09-09
Authors: Tsai, Y.C.I., Frankel, P., Fotinou, C., Rana, R., Zachary, I., Djordjevic, S.
PDB entry 5dn3: Aurora A in complex with ATP and AA35.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-09-09
Authors: Janecek, M., Rossmann, M., Sharma, P., Emery, A., McKenzie, G., Huggins, D., Stockwell, S., Stokes, J.A., Almeida, E.G., Hardwick, B., Narvaez, A.J., Hyvonen, M., Spring, D.R., Venkitaraman, A.
PDB entry 5dn4: Structure of the glycoside hydrolase domain from Salmonella typhimurium FlgJ
Classification: HYDROLASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-09-09
Authors: Zaloba, P., Bailey-Elkin, B.A., Mark, B.L.
PDB entry 5dn5: Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ
Classification: HYDROLASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-09-09
Authors: Zaloba, P., Bailey-Elkin, B.A., Mark, B.L.
PDB entry 5dn6: ATP synthase from Paracoccus denitrificans
Classification: HYDROLASE
Source organism: Paracoccus denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.98 Å
Deposited: 2015-09-09
Authors: Morales-Rios, E., Montgomery, M.G., Leslie, A.G.W., Walker, J.E.
PDB entry 5dn7: Crescerin uses a TOG domain array to regulate microtubules in the primary cilium
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-09-09
Authors: Das, A., Dickinson, D.J., Wood, C.C., Goldstein, B., Slep, K.C.
PDB entry 5dn8: 1.76 Angstrom Crystal Structure of GTP-binding Protein Der from Coxiella burnetii in Complex with GDP.
Classification: GTP-binding protein
Source organism: Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2015-09-09
Authors: Minasov, G., Shuvalova, L., Han, A., Kim, H.-Y., Grimshaw, S., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5dn9: Crystal structure of Candida boidinii formate dehydrogenase complexed with NAD+ and azide
Classification: OXIDOREDUCTASE
Source organism: Candida boidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-09-09
Authors: Guo, Q., Gakhar, L., Wichersham, K., Francis, K., Vardi-Kilshtain, A., Major, D.T., Cheatum, C.M., Kohen, A.
PDB entry 5dna: Crystal structure of Candida boidinii formate dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Candida boidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2015-09-09
Authors: Guo, Q., Gakhar, L., Wichersham, K., Francis, K., Vardi-Kilshtain, A., Major, D.T., Cheatum, C.M., Kohen, A.
PDB entry 5dnb: STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-G-T-T-G-G AND COMPARISON WITH ISOMORPHOUS DECAMERS C-C-A-A-G-A-T-T-G-G AND C-C-A-G-G-C-C-T-G-G
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 1990-03-22
Authors: Prive, G.G., Yanagi, K., Dickerson, R.E.
PDB entry 5dnc: Crystal structure of the Asn-bound guinea pig L-asparaginase 1 catalytic domain active site mutant T19A
Classification: HYDROLASE
Source organism: Cavia porcellus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2015-09-09
Authors: Schalk, A.M., Lavie, A.
PDB entry 5dnd: Crystal structure of the Asn-bound guinea pig L-asparaginase 1 catalytic domain active site mutant T116A
Classification: HYDROLASE
Source organism: Cavia porcellus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2015-09-09
Authors: Schalk, A.M., Lavie, A.
PDB entry 5dne: Crystal structure of the Asn-bound guinea pig L-asparaginase 1 catalytic domain active site mutant K188M
Classification: HYDROLASE
Source organism: Cavia porcellus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2015-09-10
Authors: Schalk, A.M., Lavie, A.
PDB entry 5dnf: Crystal structure of CC chemokine 5 (CCL5) oligomer in complex with heparin
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.549 Å
Deposited: 2015-09-10
Authors: Liang, W.G., Tang, W.
PDB entry 5dni: Crystal structure of Methanocaldococcus jannaschii Fumarate hydratase beta subunit
Classification: LYASE
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-10
Authors: Jayaraman, V., Kunala, J., Balaram, H.
PDB entry 5dnj: Mouse Polo-box domain and Peptide analog 702
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-10
Authors: Namgoong, S., Han, Y.H.
PDB entry 5dnk: The structure of PKMT1 from Rickettsia prowazekii in complex with AdoHcy
Classification: TRANSFERASE
Source organism: Rickettsia prowazekii (strain Madrid E)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-09-10
Authors: Noinaj, N., Abeykoon, A., He, Y., Yang, D.C., Buchanan, S.K.
PDB entry 5dnl: Crystal structure of IGPD from Pyrococcus furiosus in complex with (S)-C348
Classification: LYASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2015-09-10
Authors: Bisson, C., Britton, K.L., Sedelnikova, S.E., Rodgers, H.F., Eadsforth, T.C., Viner, R.C., Hawkes, T.R., Baker, P.J., Rice, D.W.
PDB entry 5dnm: Nucleosome core particle containing adducts of ruthenium(II)-toluene PTA complex
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2015-09-10
Authors: Adhireksan, Z., Muhammad, R., Davey, C.A.
PDB entry 5dnn: Nucleosome core particle containing adducts of gold(I)-triethylphosphane and ruthenium(II)-toluene PTA complexes
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-09-10
Authors: Adhireksan, Z., Ma, Z., Davey, C.A.
PDB entry 5dno: Crystal structure of Mmi1 YTH domain complex with RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Schizosaccharomyces pombe 972h-; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-09-10
Authors: Wang, C.Y., Zhu, Y.W., Wu, J.H., Shi, Y.Y.
PDB entry 5dnp: Crystal structure of Mmi1 YTH domain
Classification: RNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe 972h-
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-10
Authors: Wang, C.Y., Zhu, Y.W., Shi, Y.Y., Wu, J.H.
PDB entry 5dnr: Aurora A Kinase in complex with ATP in space group P41212
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-09-10
Authors: Janecek, M., Rossmann, M., Sharma, P., Emery, A., McKenzie, G., Huggins, D., Stockwell, S., Stokes, J.A., Almeida, E.G., Hardwick, B., Narvaez, A.J., Hyvonen, M., Spring, D.R., Venkitaraman, A.
PDB entry 5dns: t1428 loop variant in P3221
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.561 Å
Deposited: 2015-09-10
Authors: MacDonald, J.T., Kabasakal, B.V., Murray, J.W.
PDB entry 5dnu: Crystal structure of Striga KAI2-like protein in complex with karrikin
Classification: HYDROLASE
Source organism: Striga hermonthica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2015-09-10
Authors: Xu, Y., Miyakawa, T., Nakamura, A., Tanokura, M.
PDB entry 5dnv: Crystal structure of KAI2-like protein from Striga (apo state 2)
Classification: HYDROLASE
Source organism: Striga hermonthica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-09-10
Authors: Xu, Y., Miyakawa, T., Nakamura, A., Tanokura, M.
PDB entry 5dnw: Crystal structure of KAI2-like protein from Striga (apo state 1)
Classification: HYDROLASE
Source organism: Striga hermonthica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2015-09-10
Authors: Xu, Y., Miyakawa, T., Nakamura, A., Tanokura, M.
PDB entry 5dnx: Crystal structure of IGPD from Pyrococcus furiosus in complex with (R)-C348
Classification: LYASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-09-10
Authors: Bisson, C., Britton, K.L., Sedelnikova, S.E., Rodgers, H.F., Eadsforth, T.C., Viner, R.C., Hawkes, T.R., Baker, P.J., Rice, D.W.
PDB entry 5dny: Structure of the ATPrS-Mre11/Rad50-DNA complex
Classification: RECOMBINATION/DNA
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2015-09-10
Authors: Liu, Y.
PDB entry 5do0: The structure of PKMT1 from Rickettsia prowazekii
Classification: TRANSFERASE
Source organism: Rickettsia prowazekii (strain Madrid E)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-09-10
Authors: Noinaj, N., Abeykoon, A., He, Y., Yang, D.C., Buchanan, S.K.
PDB entry 5do2: Complex structure of MERS-RBD bound with 4C2 antibody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Middle East respiratory syndrome coronavirus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.409 Å
Deposited: 2015-09-10
Authors: Li, Y., Wan, Y., Liu, P., Zhao, J., Lu, G., Qi, J., Wang, Q., Lu, X., Wu, Y., Liu, W., Yuen, K.Y., Perlman, S., Gao, G.F., Yan, J.
PDB entry 5do4: Thrombin-RNA aptamer complex
Classification: Hydrolase/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.859 Å
Deposited: 2015-09-10
Authors: Pallan, P.S., Egli, M.
PDB entry 5do5: Crystal Structure of 2'-Fluoro-RNA bearing a phosphorodithioate
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2015-09-10
Authors: Pallan, P.S., Egli, M.
PDB entry 5do6: Crystal structure of Dendroaspis polylepis venom mambalgin-1 T23A mutant
Classification: TOXIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.697 Å
Deposited: 2015-09-10
Authors: Stura, E.A., Tepshi, L., Kessler, P., Gilles, M., Servent, D.
PDB entry 5do7: Crystal Structure of the Human Sterol Transporter ABCG5/ABCG8
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.93 Å
Deposited: 2015-09-10
Authors: Lee, J.-Y., Kinch, L.N., Borek, D.M., Urbatsch, I.L., Xie, X.-S., Grishin, N.V., Cohen, J.C., Otwinowski, Z., Hobbs, H.H., Rosenbaum, D.M.
PDB entry 5do8: 1.8 Angstrom crystal structure of Listeria monocytogenes Lmo0184 alpha-1,6-glucosidase
Classification: HYDROLASE
Source organism: Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-09-10
Authors: Light, S.H., Halavaty, A.S., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5do9: Structure of regulator of G protein signaling 8 (RGS8) in complex with AlF4-activated Galpha-q
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-09-10
Authors: Taylor, V.G., Tesmer, J.J.G.
PDB entry 5dob: Crystal structure of the Human Cytomegalovirus Nuclear Egress Complex (NEC)
Classification: DNA BINDING PROTEIN
Source organism: Human cytomegalovirus; Human cytomegalovirus (strain AD169)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2015-09-11
Authors: Lye, M.F., El Omari, K., Filman, D.J., Hogle, J.M.
PDB entry 5doc: Crystal structure of the Human Cytomegalovirus UL53 subunit of the NEC
Classification: DNA BINDING PROTEIN
Source organism: Human cytomegalovirus (strain AD169)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-09-11
Authors: Lye, M.F., El Omari, K., Filman, D.J., Hogle, J.M.
PDB entry 5doe: Crystal structure of the Human Cytomegalovirus UL53 (residues 72-292)
Classification: DNA BINDING PROTEIN
Source organism: Human cytomegalovirus (strain AD169)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-09-11
Authors: Lye, M.F., El Omari, K., Filman, D.J., Hogle, J.M.
PDB entry 5dof: Crystal structure of Tetrahymena p19
Classification: DNA BINDING PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-09-11
Authors: Wan, B., Tang, T., Wu, J., Lei, M.
PDB entry 5dog: Crystal structure of human carbonic anhydrase isozyme II with 2-(Benzylamino)-3,5,6-trifluoro-4-[(2-phenylethyl)thio]benzene- sulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-09-11
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 5doh: Crystal structure of human carbonic anhydrase isozyme II with 2-[(1S)-2,3-Dihydro-1H-inden-1-ylamino]-3,5,6-trifluoro-4-[(2-hydroxyethyl)thio]benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2015-09-11
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 5doi: Crystal structure of Tetrahymena p45N and p19
Classification: DNA BINDING PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-09-11
Authors: Wan, B., Tang, T., Wu, J., Lei, M.
PDB entry 5dok: Crystal structure of Tetrahymena p45C
Classification: DNA BINDING PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-11
Authors: Wan, B., Tang, T., Wu, J., Lei, M.
PDB entry 5dol: Crystal structure of YabA amino-terminal domain from Bacillus subtilis
Classification: REPLICATION
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-09-11
Authors: Cherrier, M.V., Bazin, A., Jameson, K.H., Wilkinson, A.J., Noirot-Gros, M.F., Terradot, L.
PDB entry 5dom: Crystal structure, maturation and flocculating properties of a 2S albumin from Moringa oleifera seeds
Classification: PLANT PROTEIN
Source organism: Moringa oleifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2015-09-11
Authors: Ullah, A., Murakami, M.T., Arni, R.K.
PDB entry 5doo: The structure of PKMT2 from Rickettsia typhi
Classification: TRANSFERASE
Source organism: Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.133 Å
Deposited: 2015-09-11
Authors: Noinaj, N., Abeykoon, A., He, Y., Yang, D.C., Buchanan, S.K.
PDB entry 5doq: The structure of bd oxidase from Geobacillus thermodenitrificans
Classification: OXIDOREDUCTASE
Source organism: Geobacillus sp. PA-3; Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2015-09-11
Authors: Safarian, S., Mueller, H., Rajendran, C., Preu, J., Ovchinnikov, S., Kusumoto, T., Hirose, T., Langer, J., Sakamoto, J., Michel, H.
PDB entry 5dor: P2 Integrase catalytic domain in space group P21
Classification: HYDROLASE
Source organism: Enterobacteria phage P2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-11
Authors: Skaar, K., Claesson, M., Odegrip, R., Haggard-Ljungquist, E., Hogbom, M.
PDB entry 5dos: Aurora A Kinase in Complex with AA35 and ATP in Space Group P6122
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2015-09-11
Authors: Janecek, M., Rossmann, M., Sharma, P., Emery, A., McKenzie, G.J., Huggins, D.J., Stockwell, S., Stokes, J.A., Almeida, E.G., Hardwick, B., Narvaez, A.J., Hyvonen, M., Spring, D.R., Venkitaraman, A.R.
PDB entry 5dot: Crystal Structure of Human Carbamoyl phosphate synthetase I (CPS1), apo form
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-11
Authors: Polo, L.M., de Cima, S., Fita, I., Rubio, V.
PDB entry 5dou: Crystal Structure of Human Carbamoyl phosphate synthetase I (CPS1), ligand-bound form
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-09-11
Authors: de Cima, S., Polo, L.M., Fita, I., Rubio, V.
PDB entry 5dov: Crystal structure of JamJ enoyl reductase (apo form)
Classification: OXIDOREDUCTASE
Source organism: Lyngbya majuscula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-09-11
Authors: Khare, D., Smith, J.L.
PDB entry 5dow: Solution of the Variably-Twinned Structure of a Novel Calmodulin-Peptide Complex in a Novel Configuration
Classification: CALCIUM BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-09-11
Authors: Keller, J.P.
PDB entry 5dox: Crystal structure of the Thermus thermophilus 70S ribosome in complex with Hygromycin-A at 3.1A resolution
Classification: Ribosome/Antibiotic
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2015-09-11
Authors: Polikanov, Y.S., Starosta, A.L., Juette, M.F., Altman, R.B., Terry, D.S., Lu, W., Burnett, B.J., Dinos, G., Reynolds, K., Blanchard, S.C., Steitz, T.A., Wilson, D.N.
PDB entry 5doy: Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution
Classification: Ribosome/Antibiotic
Source organism: Escherichia coli; Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-09-11
Authors: Polikanov, Y.S., Starosta, A.L., Juette, M.F., Altman, R.B., Terry, D.S., Lu, W., Burnett, B.J., Dinos, G., Reynolds, K., Blanchard, S.C., Steitz, T.A., Wilson, D.N.
PDB entry 5doz: Crystal structure of JamJ enoyl reductase (NADPH bound)
Classification: OXIDOREDUCTASE
Source organism: Lyngbya majuscula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2015-09-11
Authors: Khare, D., Smith, J.L.
PDB entry 5dp0: Crystal Structure of the ER-alpha Ligand-binding Domain in complex with a 4-fluorophenylamino-substituted triaryl-ethylene derivative 4,4'-(2-{3-[(4-fluorophenyl)amino]phenyl}ethene-1,1-diyl)diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.382 Å
Deposited: 2015-09-11
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dp1: Crystal structure of CurK enoyl reductase
Classification: OXIDOREDUCTASE
Source organism: Moorea producens 3L
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-09-12
Authors: Khare, D., Smith, J.L.
PDB entry 5dp2: CurF ER cyclopropanase from curacin A biosynthetic pathway
Classification: OXIDOREDUCTASE
Source organism: Lyngbya majuscula
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2015-09-12
Authors: Khare, D., Smith, J.L.
PDB entry 5dp3: Crystal Structure of EV71 3C Proteinase in complex with compound 2
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-09-12
Authors: Wu, C., Zhang, L., Li, P., Cai, Q., Peng, X., Li, N., Cai, Y., Li, J., Lin, T.
PDB entry 5dp4: Crystal Structure of EV71 3C Proteinase in complex with compound 3
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2015-09-12
Authors: Wu, C., Zhang, L., Li, P., Cai, Q., Peng, X., Li, N., Cai, Y., Li, J., Lin, T.
PDB entry 5dp5: Crystal Structure of EV71 3C Proteinase in complex with compound 4
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2015-09-12
Authors: Wu, C., Zhang, L., Li, P., Cai, Q., Peng, X., Li, N., Cai, Y., Li, J., Lin, T.
PDB entry 5dp6: Crystal Structure of EV71 3C Proteinase in complex with compound 7
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2015-09-12
Authors: Wu, C., Zhang, L., Li, P., Cai, Q., Peng, X., Li, N., Cai, Y., Li, J., Lin, T.
PDB entry 5dp7: Crystal Structure of EV71 3C Proteinase in complex with compound 5
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2015-09-12
Authors: Wu, C., Zhang, L., Li, P., Cai, Q., Peng, X., Li, N., Cai, Y., Li, J., Lin, T.
PDB entry 5dp8: Crystal Structure of EV71 3C Proteinase in complex with compound 8
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-12
Authors: Wu, C., Zhang, L., Li, P., Cai, Q., Peng, X., Li, N., Cai, Y., Li, J., Lin, T.
PDB entry 5dp9: Crystal Structure of EV71 3C Proteinase in complex with compound 9
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-09-12
Authors: Wu, C., Zhang, L., Li, P., Cai, Q., Peng, X., Li, N., Cai, Y., Li, J., Lin, T.
PDB entry 5dpa: Crystal Structure of EV71 3C Proteinase in complex with compound 6
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2015-09-12
Authors: Wu, C., Zhang, L., Li, P., Cai, Q., Peng, X., Li, N., Cai, Y., Li, J., Lin, T.
PDB entry 5dpd: The structure of PKMT1 from Rickettsia prowazekii in complex with AdoMet
Classification: TRANSFERASE
Source organism: Rickettsia prowazekii (strain Madrid E)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-09-12
Authors: Noinaj, N., Abeykoon, A., He, Y., Yang, D.C., Buchanan, S.K.
PDB entry 5dpe: Thermolysin in complex with inhibitor.
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2015-09-12
Authors: Krimmer, S.G., Heine, A., Klebe, G.
PDB entry 5dpf: Thermolysin in complex with inhibitor.
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2015-09-12
Authors: Krimmer, S.G., Heine, A., Klebe, G.
PDB entry 5dpg: sfGFP mutant - 133 p-cyano-L-phenylalanine
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-09-12
Authors: Dippel, A.B., Olenginski, G.M., Maurici, N., Liskov, M.T., Brewer, S.H., Phillips-Piro, C.M.
PDB entry 5dph: sfGFP mutant - 149 p-cyano-L-phenylalanine
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2015-09-12
Authors: Dippel, A.B., Olenginski, G.M., Maurici, N., Liskov, M.T., Brewer, S.H., Phillips-Piro, C.M.
PDB entry 5dpi: sfGFP double mutant - 133/149 p-cyano-L-phenylalanine
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2015-09-12
Authors: Dippel, A.B., Olenginski, G.M., Maurici, N., Liskov, M.T., Brewer, S.H., Phillips-Piro, C.M.
PDB entry 5dpj: sfGFP double mutant - 133/149 p-ethynyl-L-phenylalanine
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-12
Authors: Dippel, A.B., Olenginski, G.M., Maurici, N., Liskov, M.T., Brewer, S.H., Phillips-Piro, C.M.
PDB entry 5dpl: The structure of PKMT2 from Rickettsia typhi in complex with AdoHcy
Classification: TRANSFERASE
Source organism: Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2015-09-12
Authors: Noinaj, N., Abeykoon, A., He, Y., Yang, D.C., Buchanan, S.K.
PDB entry 5dpm: Crystal structure of UbiG mutant in complex with SAH
Classification: TRANSFERASE
Source organism: Escherichia coli O9:H4 (strain HS)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-09-13
Authors: Zhu, Y., Jiang, X., Li, X., Teng, M.
PDB entry 5dpn: Engineered CBM X-2 L110F in complex with branched carbohydrate XXXG.
Classification: SUGAR BINDING PROTEIN
Source organism: Rhodothermus marinus
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2015-09-13
Authors: Ohlin, M.
PDB entry 5dpo: The crystal structure of uncharacterized protein (LPG2149) from Legionella pneumophila
Classification: UNKNOWN FUNCTION
Source organism: Legionella pneumophila str. Paris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.644 Å
Deposited: 2015-09-13
Authors: Nocek, B., Cuff, M., Evdokimova, E., Joachimiak, A., Savchenko, A.
PDB entry 5dpq: Crystal Structure of E72A mutant of domain swapped dimer Human Cellular Retinol Binding Protein
Classification: Retinol Binding Protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.775 Å
Deposited: 2015-09-14
Authors: Assar, Z., Nossoni, Z., Wang, W., Geiger, J.H., Borhan, B.
PDB entry 5dpr: Crystal structure of PLEKHM1 LIR-fused human LC3A_2-121
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-14
Authors: Ravichandran, A.C., Suzuki, H., Dobson, R.C.J.
PDB entry 5dps: Crystal structure of PLEKHM1 LIR-fused human GABARAP_2-117
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-09-14
Authors: Ravichandran, A.C., Suzuki, H., Dobson, R.C.J.
PDB entry 5dpt: Crystal structure of PLEKHM1 LIR-fused human GABARAPL1_2-117
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-09-14
Authors: Ravichandran, A.C., Suzuki, H., Dobson, R.C.J.
PDB entry 5dpv: Aurora A Kinase in Complex with AA35 and JNJ-7706621 in Space Group P6122
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.285 Å
Deposited: 2015-09-14
Authors: Janecek, M., Rossmann, M., Sharma, P., Emery, A., McKenzie, G.J., Huggins, D.J., Stockwell, S., Stokes, J.A., Almeida, E.G., Hardwick, B., Narvaez, A.J., Hyvonen, M., Spring, D.R., Venkitaraman, A.R.
PDB entry 5dpw: Crystal structure of PLEKHM1 LIR in complex with human LC3C_8-125
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.185 Å
Deposited: 2015-09-14
Authors: Ravichandran, A.C., Suzuki, H., Dobson, R.C.J.
PDB entry 5dpx: 1,2,4-Triazole-3-thione compounds as inhibitors of L1, di-zinc metallo-beta-lactamases.
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-09-14
Authors: Nauton, L., Garau, G., Khan, R., Dideberg, O.
PDB entry 5dpz: Endothiapepsin in complex with fragment 31
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.328 Å
Deposited: 2015-09-14
Authors: Radeva, N., Uehlein, M., Weiss, M., Heine, A., Klebe, G.
PDB entry 5dq0: Structure of human neuropilin-2 b1 domain with novel and unique zinc binding site
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-09-14
Authors: Tsai, Y.I., Rana, R.R., Zachary, I., Djordjevic, S.
PDB entry 5dq1: Endothiapepsin in complex with fragment 34
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.489 Å
Deposited: 2015-09-14
Authors: Radeva, N., Uehlein, M., Weiss, M., Heine, A., Klebe, G.
PDB entry 5dq2: Endothiapepsin in complex with fragment 48
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.514 Å
Deposited: 2015-09-14
Authors: Radeva, N., Uehlein, M., Weiss, M., Heine, A., Klebe, G.
PDB entry 5dq4: Endothiapepsin in complex with fragment 66
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2015-09-14
Authors: Radeva, N., Heine, A., Klebe, G.
PDB entry 5dq5: Endothiapepsin in complex with fragment 209
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2015-09-14
Authors: Radeva, N., Heine, A., Klebe, G.
PDB entry 5dq6: Mus musculus A20 OTU domain
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-09-14
Authors: Mabbitt, P.D., Jackson, C.J.
PDB entry 5dq8: Crystal structure of human transcription factor TEAD2 in complex with flufenamic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.305 Å
Deposited: 2015-09-14
Authors: Han, X., Luo, X.
PDB entry 5dq9: Structure of S55-3 Fab in complex with Lipid A
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-09-14
Authors: Haji-Ghassemi, O., Evans, S.V.
PDB entry 5dqa: t3284 loop variant of beta1
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.27 Å
Deposited: 2015-09-14
Authors: Kabasakal, B.V., MacDonald, J.T., Murray, W.W.
PDB entry 5dqb: Green/cyan WasCFP at pH 8.0
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea coerulescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2015-09-14
Authors: Pletnev, V., Pletneva, N., Pletnev, S.
PDB entry 5dqc: Co-crystal of BACE1 with compound 0211
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4651 Å
Deposited: 2015-09-14
Authors: Ghosh, A.K., Bhavanam, S.R., Yen, T.-C., Cardenas, E.L., Rao, K.V., Downs, D., Huang, X., Tang, J., Mescar, A.D.
PDB entry 5dqd: Structure of S55-5 Fab in complex with lipid A carbohydrate backbone
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-09-14
Authors: Haji-Ghassemi, O., Evans, S.V.
PDB entry 5dqe: Crystal structure of human transcription factor TEAD2 in complex with bromo-fenamic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.183 Å
Deposited: 2015-09-14
Authors: Han, X., Luo, X.
PDB entry 5dqf: Horse Serum Albumin (ESA) in complex with Cetirizine
Classification: TRANSPORT PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-09-14
Authors: Handing, K.B., Shabalin, I.G., Majorek, K.A., Chruszcz, M., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 5dqg: Crystal Structure of Human DNA Polymerase Eta Inserting dAMPNPP Opposite O4-Ethylthymidine
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2015-09-14
Authors: Patra, A., OFlaherty, D.K., Egli, M.
PDB entry 5dqh: Crystal Structure of Human DNA Polymerase Eta Inserting dGMPNPP Opposite O4-Ethylthymidine
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2015-09-14
Authors: Patra, A., OFlaherty, D.K., Egli, M.
PDB entry 5dqi: Crystal Structure of Human DNA Polymerase Eta Extending an O4-Ethylthymidine : dA Pair By Inserting dCTP Opposite dG
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-14
Authors: Patra, A., OFlaherty, D.K., Egli, M.
PDB entry 5dqj: Structure of unliganded S55-5 Fab
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2015-09-14
Authors: Haji-Ghassemi, O., Evans, S.V.
PDB entry 5dqk: Two divalent metal ions and conformational changes play roles in the hammerhead ribozyme cleavage reaction-WT ribozyme in Mg2+
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.707 Å
Deposited: 2015-09-14
Authors: Mir, A., Chen, J., Neau, D., Golden, B.L.
PDB entry 5dql: Crystal Structure of 2-vinyl glyoxylate modified isocitrate lyase from Mycobacterium tuberculosis
Classification: LYASE/LYASE INHIBITOR
Source organism: Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.782 Å
Deposited: 2015-09-14
Authors: Huang, H.-L., Meek, T.D.
PDB entry 5dqm: Green/cyan WasCFP at pH 2.0
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea coerulescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2015-09-14
Authors: Pletnev, V.Z., Pletneva, N.V., Pletnev, S.V.
PDB entry 5dqn: Polyethylene 600-bound form of P450 CYP125A3 mutant from Myobacterium Smegmatis - W83Y
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.262 Å
Deposited: 2015-09-15
Authors: Ortiz de Montellano, P.J., Frank, D.J., Waddling, C.A.
PDB entry 5dqo: Crystal structure of Y347F mutant of human primase p58 iron-sulfur cluster domain
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-15
Authors: Salay, L.E., Thompson, M.K., Chazin, W.J.
PDB entry 5dqp: EDTA monooxygenase (EmoA) from Chelativorans sp. BNC1
Classification: OXIDOREDUCTASE
Source organism: EDTA-degrading bacterium BNC1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.146 Å
Deposited: 2015-09-15
Authors: Jun, S.Y., Youn, B., Xun, L., Kang, C., Lewis, K.M.
PDB entry 5dqq: Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana
Classification: TRANSPORT PROTEIN/INHIBITOR
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.872 Å
Deposited: 2015-09-15
Authors: Kintzer, A.F., Stroud, R.M.
PDB entry 5dqr: The crystal structure of Arabidopsis 7-hydroxymethyl chlorophyll a reductase (HCAR)
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-09-15
Authors: Wang, X., Liu, L.
PDB entry 5dqs: Complex structure of human elongation factor 1B alpha and gamma GST-like domains
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-09-15
Authors: Choi, Y.S., Cho, H.Y., Kang, B.S.
PDB entry 5dqt: Crystal Structure of Cas-DNA-22 complex
Classification: HYDROLASE/DNA
Source organism: Escherichia coli K12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2015-09-15
Authors: Wang, J., Li, J., Zhao, H., Sheng, G., Wang, M., Yin, M., Wang, Y.
PDB entry 5dqu: Crystal Structure of Cas-DNA-10 complex
Classification: HYDROLASE/DNA
Source organism: Escherichia coli K12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.5 Å
Deposited: 2015-09-15
Authors: Wang, J., Li, J., Zhao, H., Sheng, G., Wang, M., Yin, M., Wang, Y.
PDB entry 5dqv: The crystal structure of Bacillus subtilis YpgQ
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-09-15
Authors: Jeon, Y.J., Song, W.S., Yoon, S.I.
PDB entry 5dqw: The crystal structure of Bacillus subtilis YpgQ in complex with ADP
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-09-15
Authors: Jeon, Y.J., Song, W.S., Yoon, S.I.
PDB entry 5dqy: A fully oxidized human thioredoxin
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2015-09-15
Authors: Hwang, J.
PDB entry 5dqz: Crystal Structure of Cas-DNA-PAM complex
Classification: HYDROLASE/DNA
Source organism: Escherichia coli K12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-09-15
Authors: Wang, J., Li, J., Zhao, H., Sheng, G., Wang, M., Yin, M., Wang, Y.
PDB entry 5dr0: Endothiapepsin in complex with fragment 203
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2015-09-15
Authors: Schiebel, J., Heine, A., Klebe, G.
PDB entry 5dr1: Endothiapepsin in complex with fragment 278
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2015-09-15
Authors: Schiebel, J., Heine, A., Klebe, G.
PDB entry 5dr2: Aurora A Kinase in Complex with AA30 and ATP in Space Group P6122
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2015-09-15
Authors: Janecek, M., Rossmann, M., Sharma, P., Emery, A., McKenzie, G.J., Huggins, D.J., Stockwell, S., Stokes, J.A., Almeida, E.G., Hardwick, B., Narvaez, A.J., Hyvonen, M., Spring, D.R., Venkitaraman, A.R.
PDB entry 5dr3: Endothiapepsin in complex with fragment 333
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2015-09-15
Authors: Schiebel, J., Heine, A., Klebe, G.
PDB entry 5dr4: Endothiapepsin in complex with fragment 231
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-09-15
Authors: Schiebel, J., Heine, A., Klebe, G.
PDB entry 5dr5: Crystal structure of the sclerostin-neutralizing Fab AbD09097
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-09-15
Authors: Mueller, T.D., Boschert, V., Weidauer, S.E., Muth, E.M., Knappik, A., Frisch, C.
PDB entry 5dr6: Aurora A Kinase in Complex with AA30 and JNJ-7706621 in Space Group P6122
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.534 Å
Deposited: 2015-09-15
Authors: Janecek, M., Rossmann, M., Sharma, P., Emery, A., McKenzie, G.J., Huggins, D.J., Stockwell, S., Stokes, J.A., Almeida, E.G., Hardwick, B., Narvaez, A.J., Hyvonen, M., Spring, D.R., Venkitaraman, A.R.