LiteFold/PDB huggingface dataset:
PDB entry 4o8w: Crystal Structure of the GerD spore germination protein
Classification: structural protein, signaling protein
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.293 Å
Deposited: 2013-12-30
Authors: Li, Y., Jin, K., Ghosh, S., Devarakonda, P., Carlson, K., Davis, A., Stewart, K., Cammett, E., Rossi, P.P., Setlow, B., Lu, M., Setlow, P., Hao, B.
PDB entry 4o8x: Zinc-bound Rpn11 in complex with Rpn8
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.991 Å
Deposited: 2013-12-30
Authors: Worden, E.J., Padovani, C., Martin, A.
PDB entry 4o8y: Zinc-free Rpn11 in complex with Rpn8
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-12-30
Authors: Worden, E.J., Padovani, C., Martin, A.
PDB entry 4o8z: Crystal structure of human SIRT3 in complex with compound (2-butylbenzofuran-3-yl)(4-(2-(diethylamino)ethoxy)-3,5-diiodophenyl)methanone
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-12-31
Authors: Liu, B.
PDB entry 4o90: Crystal structure of chorismate synthase from Acinetobacter baumannii at 2.6A resolution
Classification: LYASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2013-12-31
Authors: Chaudhary, A., Singh, N., Shukla, P.K., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4o91: Crystal Structure of type II inhibitor NG25 bound to TAK1-TAB1
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.393 Å
Deposited: 2013-12-31
Authors: Gurbani, D., Hunter, J.C., Tan, L., Westover, K.D.
PDB entry 4o92: Crystal structure of a Glutathione S-transferase from Pichia kudriavzevii (Issatchenkia orientalis), target EFI-501747
Classification: TRANSFERASE
Source organism: Pichia kudriavzevii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2013-12-31
Authors: Kim, J., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Glenn, A.S., Chowdhury, S., Evans, B., Stead, M., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Attonito, J.D., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4o93: Crystal structure of Thermus thermophilis transhydrogeanse domain II dimer
Classification: MEMBRANE PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2013-12-31
Authors: Leung, J.H., Yamaguchi, M., Moeller, A., Schurig-Briccio, L.A., Gennis, R.B., Potter, C.S., Carragher, B., Stout, C.D.
PDB entry 4o94: Crystal structure of a trap periplasmic solute binding protein from Rhodopseudomonas palustris HaA2 (RPB_3329), Target EFI-510223, with bound succinate
Classification: TRANSPORT PROTEIN
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-01-01
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4o95: Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (ZmCKO4) in complex with phenylurea inhibitor CPPU
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-01-01
Authors: Kopecny, D., Morera, S., Vigouroux, A., Koncitikova, R.
PDB entry 4o96: 2.60 Angstrom resolution crystal structure of a protein kinase domain of type III effector NleH2 (ECs1814) from Escherichia coli O157:H7 str. Sakai
Classification: HYDROLASE
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-01-01
Authors: Anderson, S.M., Halavaty, A.S., Wawrzak, Z., Kudritska, M., Skarina, T., Yim, V., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4o97: Crystal structure of matriptase in complex with inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-01-02
Authors: Rao, K.N., Chandra, B.R., Ashok, K.N., Chakshusmathi, G., Ramesh, K.S., Subramanya, H.S.
PDB entry 4o98: Crystal structure of Pseudomonas oleovorans PoOPH mutant H250I/I263W
Classification: HYDROLASE
Source organism: Pseudomonas oleovorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.251 Å
Deposited: 2014-01-02
Authors: Luo, X.J., Kong, X.D., Zhao, J., Chen, Q., Zhou, J.H., Xu, J.H.
PDB entry 4o99: Crystal structure of Beta-ketothiolase (PhaA) from Ralstonia eutropha H16
Classification: TRANSFERASE
Source organism: Ralstonia eutropha
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2014-01-02
Authors: Kim, E.J., Kim, J., Kim, S., Kim, K.J.
PDB entry 4o9a: Crystal structure of Beta-ketothiolase (PhaA) from Ralstonia eutropha H16
Classification: TRANSFERASE
Source organism: Ralstonia eutropha
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2014-01-02
Authors: Kim, E.J., Kim, J., Kim, S., Kim, K.J.
PDB entry 4o9b: The Structure of CC1-IH in human STIM1.
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.604 Å
Deposited: 2014-01-02
Authors: Cui, B., Yang, X., Li, S., Shen, Y.
PDB entry 4o9c: Crystal structure of Beta-ketothiolase (PhaA) from Ralstonia eutropha H16
Classification: TRANSFERASE
Source organism: Ralstonia eutropha
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-01-02
Authors: Kim, E.J., Kim, J., Kim, S., Kim, K.J.
PDB entry 4o9d: Structure of Dos1 propeller
Classification: GENE REGULATION
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-01-02
Authors: Kuscu, C., Schalch, T., Joshua-Tor, L.
PDB entry 4o9e: Crystal structure of QdtA, a sugar 3,4-ketoisemerase from Thermoanaerobacterium thermosaccharolyticum in complex with TDP
Classification: ISOMERASE
Source organism: Thermoanaerobacterium thermosaccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-01-02
Authors: Thoden, J.B., Holden, H.M.
PDB entry 4o9f: crystal structure of horse MAVS card domain mutant R64C
Classification: ANTIVIRAL PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.348 Å
Deposited: 2014-01-02
Authors: Zhang, X., He, X.
PDB entry 4o9g: Crystal structure of the H51N mutant of the 3,4-ketoisomerase QdtA from Thermoanaerobacterium thermosaccharolyticum in complex with TDP-4-keto-6-deoxyglucose
Classification: ISOMERASE
Source organism: Thermoanaerobacterium thermosaccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-01-02
Authors: Thoden, J.B., Holden, H.M.
PDB entry 4o9h: Structure of Interleukin-6 in complex with a Camelid Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Llama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2014-01-02
Authors: Klarenbeek, A., Blanchetot, C., Schragel, G., Sadi, A.S., Ongenae, N., Hemrika, W., Wijdenes, J., Spinelli, S., Desmyter, A., Cambillau, C., Hultberg, A., Kretz-rommel, A., Dreier, T., De haard, H.J.W., Roovers, R.C.
PDB entry 4o9i: Structure of CHD4 double chromodomains depicts cooperative folding for DNA binding
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-01-02
Authors: Wiggs, K.R., Chruszcz, M., Su, X., Minor, W., Khorasanizadeh, S.
PDB entry 4o9k: Crystal structure of the CBS pair of a putative D-arabinose 5-phosphate isomerase from Methylococcus capsulatus in complex with CMP-Kdo
Classification: ISOMERASE
Source organism: Methylococcus capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-01-02
Authors: Shabalin, I.G., Cooper, D.R., Shumilin, I.A., Zimmerman, M.D., Majorek, K.A., Hammonds, J., Hillerich, B.S., Nawar, A., Bonanno, J., Seidel, R., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4o9l: crystal structure of horse MAVS card domain mutant E26R
Classification: ANTIVIRAL PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.944 Å
Deposited: 2014-01-02
Authors: Zhang, X., He, X.
PDB entry 4o9m: Human DNA polymerase beta complexed with adenylated tetrahydrofuran (abasic site) containing DNA
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.295 Å
Deposited: 2014-01-02
Authors: Caglayan, M., Batra, V.K., Sassa, A., Prasad, R., Wilson, S.H.
PDB entry 4o9p: Crystal structure of Thermus thermophilis transhydrogeanse domain II dimer SeMet derivative
Classification: MEMBRANE PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2014-01-02
Authors: Leung, J.H., Yamaguchi, M., Moeller, A., Schurig-Briccio, L.A., Gennis, R.B., Potter, C.S., Carragher, B., Stout, C.D.
PDB entry 4o9r: Human Smoothened Receptor structure in complex with cyclopamine
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.204 Å
Deposited: 2014-01-02
Authors: Wang, C., Weierstall, U., James, D., White, T.A., Wang, D., Liu, W., Spence, J.C.H., Doak, R.B., Nelson, G., Fromme, P., Fromme, R., Grotjohann, I., Kupitz, C., Zatsepin, N.A., Liu, H., Basu, S., Wacker, D., Han, G.W., Katritch, V., Boutet, S., Messerschmidt, M., Willams, G.J., Koglin, J.E., Seibert, M.M., Klinker, M., Gati, C., Shoeman, R.L., Barty, A., Chapman, H.N., Kirian, R.A., Beyerlein, K.R., Stevens, R.C., Li, D., Shah, S.T.A., Howe, N., Caffrey, M., Cherezov, V., GPCR Network (GPCR)
PDB entry 4o9s: Crystal structure of Retinol-Binding Protein 4 (RBP4)in complex with a non-retinoid ligand
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-01-02
Authors: Wang, Z., Johnstone, S., Walker, N.P.
PDB entry 4o9t: Mechanism of transhydrogenase coupling proton translocation and hydride transfer
Classification: MEMBRANE PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.079 Å
Deposited: 2014-01-02
Authors: Leung, J.H., Yamaguchi, M., Moeller, A., Schurig-Briccio, L.A., Gennis, R.B., Potter, C.S., Carragher, B., Stout, C.D.
PDB entry 4o9u: Mechanism of transhydrogenase coupling proton translocation and hydride transfer
Classification: MEMBRANE PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 6.926 Å
Deposited: 2014-01-02
Authors: Leung, J.H., Yamaguchi, M., Moeller, A., Schurig-Briccio, L.A., Gennis, R.B., Potter, C.S., Carragher, B., Stout, C.D.
PDB entry 4o9v: Crystal structure of matriptase in complex with inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-01-03
Authors: Rao, K.N., Chandra, B.R., Ashok, K.N., Chakshusmathi, G., Ramesh, K.S., Subramanya, H.S.
PDB entry 4o9w: Crystal structure of polo-like kinase(PLK1)PBD in complex with phospho peptide
Classification: TRANSFERASE/PEPTIDE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.694 Å
Deposited: 2014-01-03
Authors: Bong, S.M., Lee, B.I., Kim, K.T.
PDB entry 4o9x: Crystal Structure of TcdB2-TccC3
Classification: TOXIN
Source organism: Photorhabdus luminescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2014-01-03
Authors: Meusch, D., Gatsogiannis, C., Efremov, R.G., Lang, A.E., Hofnagel, O., Vetter, I.R., Aktories, K., Raunser, S.
PDB entry 4o9y: Crystal Structure of TcdA1
Classification: TOXIN
Source organism: Photorhabdus luminescens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.502 Å
Deposited: 2014-01-03
Authors: Meusch, D., Gatsogiannis, C., Efremov, R.G., Lang, A.E., Hofnagel, O., Vetter, I.R., Aktories, K., Raunser, S.
PDB entry 4oa3: Crystal structure of the BA42 protein from BIZIONIA ARGENTINENSIS
Classification: UNKNOWN FUNCTION
Source organism: Bizionia argentinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2014-01-03
Authors: Otero, L.H., Klinke, S., Aran, M., Pellizza, L., Goldbaum, F.A., Cicero, D.
PDB entry 4oa4: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM SHEWANELLA LOIHICA PV-4 (Shew_1446), TARGET EFI-510273, WITH BOUND SUCCINATE
Classification: PROTEIN BINDING
Source organism: Shewanella loihica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-01-03
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4oa5: X-ray crystal structure of an O-methyltransferase from Anaplasma phagocytophilum bound to SAH solved by iodide SAD phasing
Classification: TRANSFERASE
Source organism: Anaplasma phagocytophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-01-03
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4oa7: Crystal structure of Tankyrase1 in complex with IWR1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2014-01-03
Authors: Zhang, X., He, H.
PDB entry 4oa8: X-ray crystal structure of O-methyltransferase from Anaplasma phagocytophilum in apo form
Classification: TRANSFERASE
Source organism: Anaplasma phagocytophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2014-01-03
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4oaa: Crystal structure of E. coli lactose permease G46W,G262W bound to sugar
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2014-01-03
Authors: Kumar, H., Kasho, V., Smirnova, I., Finer-Moore, J., Kaback, H.R., Stroud, R.M.
PDB entry 4oad: Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with chloramphenicol
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2014-01-04
Authors: Majorek, K.A., Niedzialkowska, E., Chruszcz, M., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 4oae: Crystal structure of a GNAT superfamily acetyltransferase PA4794 C29A/C117A/Y128A mutant in complex with chloramphenicol
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2014-01-04
Authors: Majorek, K.A., Chruszcz, M., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 4oaf: Crystal structure of the cytosolic domain of mouse MiD51
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-01-04
Authors: Loson, O.C., Kaiser, J.T., Chan, D.C.
PDB entry 4oag: Crystal structure of the cytosolic domain of mouse MiD51 bound to ADP
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-01-04
Authors: Loson, O.C., Kaiser, J.T., Chan, D.C.
PDB entry 4oah: Crystal structure of the cytosolic domain of mouse MiD51 H201A mutant
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-01-04
Authors: Loson, O.C., Kaiser, J.T., Chan, D.C.
PDB entry 4oai: Crystal structure of the cytosolic domain of mouse MiD51 dimer mutant
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-01-04
Authors: Loson, O.C., Kaiser, J.T., Chan, D.C.
PDB entry 4oaj: Crystal structure of the complex between SAP97 PDZ2 and 5HT2A receptor peptide
Classification: PROTEIN BINDING
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-01-04
Authors: Pandalaneni, S., Dorr, L., Mayans, O., Lian, L.-Y.
PDB entry 4oak: Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant in complex with D-Alanine-D-Alanine and copper (II)
Classification: HYDROLASE
Source organism: Enterococcus gallinarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-01-04
Authors: Stogios, P.J., Evdokimova, E., Meziane-Cherif, D., Di Leo, R., Yim, V., Courvalin, P., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4oal: Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (ZmCKO4) in complex with phenylurea inhibitor CPPU in alternative spacegroup
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-01-05
Authors: Kopecny, D., Morera, S., Vigouroux, A., Koncitikova, R.
PDB entry 4oan: Crystal structure of a TRAP periplasmic solute binding protein from rhodopseudomonas palustris HaA2 (RPB_2686), TARGET EFI-510221, with density modeled as (S)-2-hydroxy-2-methyl-3-oxobutanoate ((S)-2-Acetolactate)
Classification: MEMBRANE PROTEIN/PROTEIN TRANSPORT
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2014-01-05
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4oao: A mutant of Axe2 (R55A), and acetyl-xylooligosaccharide esterase from Geobacillus Stearmophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-01-06
Authors: Lansky, S., Alalouf, O., Solomon, H.V., Belrhali, H., Shoham, Y., Shoham, G.
PDB entry 4oap: An Axe2 mutant (W190I), an acetyl-xylooligosaccharide esterase from Geobacillus Stearmophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2014-01-06
Authors: Lansky, S., Alalouf, O., Solomon, H.V., Belrhali, H., Shoham, Y., Shoham, G.
PDB entry 4oaq: Crystal structure of the R-specific Carbonyl Reductase from Candida parapsilosis ATCC 7330
Classification: OXIDOREDUCTASE
Source organism: Candida parapsilosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.858 Å
Deposited: 2014-01-06
Authors: Aggrawal, N., Mandal, P.K., Gautham, N., Chadha, A.
PDB entry 4oar: Progesterone receptor with bound ulipristal acetate and a peptide from the co-repressor SMRT
Classification: TRANSCRIPTION/Peptide
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2014-01-06
Authors: Petit-Topin, I., Fay, M.R., Resche-Rigon, M., Ulmann, A., Gainer, E., Rafestin-Oblin, M.-E., Fagart, J.
PDB entry 4oas: co-crystal structure of MDM2 (17-111) in complex with compound 25
Classification: ligase/ligase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-01-06
Authors: Huang, X.
PDB entry 4oat: The crystal structure of a solute-binding protein (N280D mutant) from Anabaena variabilis ATCC 29413 in complex with isoleucine.
Classification: TRANSPORT PROTEIN
Source organism: Anabaena variabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.199 Å
Deposited: 2014-01-06
Authors: Tan, K., Li, H., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4oau: Complete human RNase L in complex with biological activators.
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-01-06
Authors: Han, Y., Donovan, J., Rath, S., Whitney, G., Chitrakar, A., Korennykh, A.
PDB entry 4oav: Complete human RNase L in complex with 2-5A (5'-ppp heptamer), AMPPCP and RNA substrate.
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-01-06
Authors: Han, Y., Donovan, J., Rath, S., Whitney, G., Chitrakar, A., Korennykh, A.
PDB entry 4oaw: Fab structure of anti-HIV gp120 V2 mAb 2158
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-01-06
Authors: Spurrier, B.R., Kong, X.P.
PDB entry 4oay: BldD CTD-c-di-GMP complex
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-01-06
Authors: Schumacher, M.A., Tschowri, N., Buttner, M., Brennan, R.G.
PDB entry 4oaz: BldD CTD-c-di-GMP complex
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2014-01-06
Authors: Schumacher, M.A., Tschowri, N., Buttner, M., Brennan, R.G.
PDB entry 4ob0: Crystal Structure of Nitrile Hydratase from Pseudonocardia thermophila bound to Phenyl Boronic Acid
Classification: LYASE
Source organism: Pseudonocardia thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2014-01-06
Authors: Rui, W., Salette, M., Ruslan, S., Richard, H., Dali, L.
PDB entry 4ob1: Crystal Structure of Nitrile Hydratase from Pseudonocardia thermophila bound to Butaneboronic Acid via Co-crystallization
Classification: HYDROLASE
Source organism: Pseudonocardia thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.631 Å
Deposited: 2014-01-06
Authors: Rui, W., Salette, M., Ruslan, S., Richard, H., Dali, L.
PDB entry 4ob2: Crystal Structure of Nitrile Hydratase from Pseudonocardia thermophila bound to Butaneboronic Acid via Crystal Soaking
Classification: LYASE
Source organism: Pseudonocardia thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2014-01-06
Authors: Rui, W., Salette, M., Ruslan, S., Richard, H., Dali, L.
PDB entry 4ob3: Crystal Structure of Nitrile Hydratase from Pseudonocardia thermophila : A Reference Structure to Boronic Acid Inhibition of Nitrile Hydratase
Classification: LYASE
Source organism: Pseudonocardia thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2014-01-06
Authors: Rui, W., Salette, M., Ruslan, S., Richard, H., Dali, L.
PDB entry 4ob4: Structure of the S. venezulae BldD DNA-binding domain
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-01-06
Authors: schumacher, M.A., Tschowri, N., Buttner, M., Brennan, R.
PDB entry 4ob5: Ontogeny of recognition specificity and functionality for the broadly neutralizing anti-HIV antibody 4E10
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-01-06
Authors: Jaffe, J.B., Rupert, P.B.
PDB entry 4ob6: Complex structure of esterase rPPE S159A/W187H and substrate (S)-Ac-CPA
Classification: HYDROLASE
Source organism: Pseudomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-01-07
Authors: Dou, S., Kong, X.D., Ma, B.D., Chen, Q., Zhou, J.H., Xu, J.H.
PDB entry 4ob7: Crystal structure of esterase rPPE mutant W187H
Classification: HYDROLASE
Source organism: Pseudomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2014-01-07
Authors: Dou, S., Kong, X.D., Ma, B.D., Xu, J.H., Zhou, J.H.
PDB entry 4ob8: Crystal structure of a novel thermostable esterase from Pseudomonas putida ECU1011
Classification: HYDROLASE
Source organism: Pseudomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2014-01-07
Authors: Dou, S., Kong, X.D., Ma, B.D., Xu, J.H., Zhou, J.H.
PDB entry 4ob9: Crystal structure of chorismate synthase from Acinetobacter baumannii at 2.50A resolution
Classification: LYASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-01-07
Authors: Shukla, P.K., Chaudhary, A., Singh, N., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4oba: Co-crystal structure of MDM2 with Inhibitor Compound 4
Classification: ligase/ligase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.602 Å
Deposited: 2014-01-07
Authors: Shaffer, P.L., Huang, X., Yakowec, P., Long, A.M.
PDB entry 4obb: The crystal structure of a solute-binding protein from Anabaena variabilis ATCC 29413 in complex with (3S)-3-methyl-2-oxopentanoic acid.
Classification: TRANSPORT PROTEIN
Source organism: Anabaena variabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.526 Å
Deposited: 2014-01-07
Authors: Tan, K., Li, H., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4obc: Crystal structure of HCV polymerase NS5b genotype 2a JFH-1 isolate with the S15G, C223H, V321I resistance mutations against the guanosine analog GS-0938 (PSI-3529238)
Classification: Viral Protein, transferase
Source organism: Hepatitis C virus JFH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-01-07
Authors: Edwards, T.E., Abendroth, J., Appleby, T.C.
PDB entry 4obd: Crystal Structure of Nelfinavir-Resistant, Inactive HIV-1 Protease (D30N/N88D) in Complex with the p1-p6 substrate variant (L449F/S451N)
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-01-07
Authors: Kolli, M.
PDB entry 4obe: Crystal Structure of GDP-bound Human KRas
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2014-01-07
Authors: Hunter, J.C., Gurbani, D., Chen, Z., Westover, K.D.
PDB entry 4obf: Crystal Structure of Nelfinavir-Resistant, Inactive HIV-1 Protease Variant (D30N/N88D) in Complex with the p1-p6 substrate variant (S451N)
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2014-01-07
Authors: Kolli, M.
PDB entry 4obg: Crystal Structure of Nelfinavir-Resistant, Inactive HIV-1 Protease (D30N/N88D) in Complex with the p1-p6 substrate.
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2014-01-07
Authors: Kolli, M.
PDB entry 4obh: Crystal Structure of Inactive HIV-1 Protease in Complex with the p1-p6 substrate variant (L449F)
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-01-07
Authors: Kolli, M.
PDB entry 4obi: Crystal structure of a DUF1312 family protein (EF3258) from Enterococcus faecalis V583 at 1.73 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.734 Å
Deposited: 2014-01-07
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4obj: Crystal Structure of Inactive HIV-1 Protease in Complex with the p1-p6 substrate variant (S451N)
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-01-07
Authors: Kolli, M.
PDB entry 4obk: Crystal structure of inactive HIV-1 protease in complex with the P1-P6 substrate variant (L449F/S451N)
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2014-01-07
Authors: Kolli, M.
PDB entry 4obm: Crystal structure of a putative transcription regulator (EUBSIR_01389) from Eubacterium siraeum DSM 15702 at 2.15 A resolution
Classification: TRANSCRIPTION REGULATOR
Source organism: Eubacterium siraeum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2014-01-07
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4obo: MAP4K4 in complex with inhibitor (compound 22), 6-(3-CHLOROPHENYL)QUINAZOLIN-4-AMINE
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-01-07
Authors: Harris, S.F., Wu, P., Coons, M.
PDB entry 4obp: MAP4K4 in complex with inhibitor (compound 29), 6-(2-FLUOROPYRIDIN-4-YL)PYRIDO[3,2-D]PYRIMIDIN-4-AMINE
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2014-01-07
Authors: Harris, S.F., Wu, P.
PDB entry 4obq: MAP4K4 in complex with inhibitor (compound 31), N-[3-(4-AMINOQUINAZOLIN-6-YL)-5-FLUOROPHENYL]-2-(PYRROLIDIN-1-YL)ACETAMIDE
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2014-01-07
Authors: Harris, S.F., Wu, P., Coons, M.
PDB entry 4obr: Crystal structure of human alpha-L-iduronidase complex with alpha-L-iduronic acid
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2014-01-07
Authors: Bie, H.Y., Yin, J., He, X., Kermode, A.R., James, M.N.G.
PDB entry 4obs: Crystal structure of human alpha-L-iduronidase in the P212121 form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2014-01-07
Authors: Bie, H., Yin, J., He, X., Kermode, A.R., James, M.N.G.
PDB entry 4obt: Crystal structure of Arabidopsis thaliana cytosolic triose phosphate isomerase
Classification: ISOMERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-01-07
Authors: Lopez-Castillo, M., Jimenez-Sandoval, P., Lara-Gonzalez, S., Brieba, L.G., Baruch, N.
PDB entry 4obu: Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (apo)
Classification: LYASE
Source organism: Ruminococcus gnavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.804 Å
Deposited: 2014-01-07
Authors: Van Benschoten, A.H., Fraser, J.S.
PDB entry 4obv: Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (alpha-FMT)
Classification: LYASE
Source organism: Ruminococcus gnavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2014-01-07
Authors: Fraser, J.S., Van Benschoten, A.H.
PDB entry 4obw: crystal structure of yeast Coq5 in the SAM bound form
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-01-07
Authors: Dai, Y.N., Zhou, K., Cao, D.D., Jiang, Y.L., Meng, F., Chi, C.B., Ren, Y.M., Chen, Y.X., Zhou, C.Z.
PDB entry 4obx: Crystal structure of yeast Coq5 in the apo form
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-01-07
Authors: Dai, Y.N., Zhou, K., Cao, D.D., Jiang, Y.L., Meng, F., Chi, C.B., Ren, Y.M., Chen, Y.X., Zhou, C.Z.
PDB entry 4oby: Crystal Structure of E.coli Arginyl-tRNA Synthetase and Ligand Binding Studies Revealed Key Residues in Arginine Recognition
Classification: LIGASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.574 Å
Deposited: 2014-01-08
Authors: Bi, K., Zheng, Y., Dong, J., Gao, F., Wang, J., Wang, Y., Gong, W.
PDB entry 4obz: Structure of Cathepsin D with inhibitor 2-(3,4-dimethoxyphenyl)-N-[N-(4-methylbenzyl)carbamimidoyl]acetamide
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2014-01-08
Authors: Graedler, U., Czodrowski, P., Tsaklakidis, C., Klein, M., Maskos, K., Leuthner, B.
PDB entry 4oc0: X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with CCIBzL, a urea-based inhibitor N~2~-[(1-carboxycyclopropyl)carbamoyl]-N~6~-(4-iodobenzoyl)-L-lysine
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-01-08
Authors: Pavlicek, J., Ptacek, J., Cerny, J., Byun, Y., Skultetyova, L., Pomper, M., Lubkowski, J., Barinka, C.
PDB entry 4oc1: X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with COIBzL, a urea-based inhibitor (2S)-2-[({(1S)-1-carboxy-2-[(2S)-oxiran-2-yl]ethyl}carbamoyl)amino]-6-[(4-iodobenzoyl)amino]hexanoic acid
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-01-08
Authors: Pavlicek, J., Ptacek, J., Cerny, J., Byun, Y., Skultetyova, L., Pomper, M., Lubkowski, J., Barinka, C.
PDB entry 4oc2: X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with CEIBzL, a urea-based inhibitor N~2~-{[(1S)-1-carboxybut-3-yn-1-yl]carbamoyl}-N~6~-(4-iodobenzoyl)-L-lysine
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2014-01-08
Authors: Pavlicek, J., Ptacek, J., Cerny, J., Byun, Y., Skultetyova, L., Pomper, M., Lubkowski, J., Barinka, C.
PDB entry 4oc3: X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with CFIBzL, a urea-based inhibitor N~2~-{[(1S)-1-carboxy-2-(furan-2-yl)ethyl]carbamoyl}-N~6~-(4-iodobenzoyl)-L-lysine
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2014-01-08
Authors: Pavlicek, J., Ptacek, J., Cerny, J., Byun, Y., Skultetyova, L., Pomper, M., Lubkowski, J., Barinka, C.
PDB entry 4oc4: X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with CPIBzL, a urea-based inhibitor N~2~-{[(1S)-1-carboxy-2-(pyridin-4-yl)ethyl]carbamoyl}-N~6~-(4-iodobenzoyl)-L-lysine
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2014-01-08
Authors: Pavlicek, J., Ptacek, J., Cerny, J., Byun, Y., Skultetyova, L., Pomper, M., Lubkowski, J., Barinka, C.
PDB entry 4oc5: X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with CHIBzL, a urea-based inhibitor N~2~-{[(S)-carboxy(4-hydroxyphenyl)methyl]carbamoyl}-N~6~-(4-iodobenzoyl)-L-lysine
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-01-08
Authors: Pavlicek, J., Ptacek, J., Cerny, J., Byun, Y., Skultetyova, L., Pomper, M., Lubkowski, J., Barinka, C.
PDB entry 4oc6: Structure of Cathepsin D with inhibitor 2-bromo-N-[(2S,3S)-4-{[2-(2,4-dichlorophenyl)ethyl][3-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)propanoyl]amino}-3-hydroxy-1-(3-phenoxyphenyl)butan-2-yl]-4,5-dimethoxybenzamide
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2014-01-08
Authors: Graedler, U., Czodrowski, P., Tsaklakidis, C., Klein, M., Maskos, K., Leuthner, B.
PDB entry 4oc7: Retinoic acid receptor alpha in complex with (E)-3-(3'-allyl-6-hydroxy-[1,1'-biphenyl]-3-yl)acrylic acid and a fragment of the coactivator TIF2
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-01-08
Authors: Leysen, S., Scheepstra, M., Brunsveld, L., Milroy, L.G., Ottmann, C.
PDB entry 4oc8: DNA modification-dependent restriction endonuclease AspBHI
Classification: HYDROLASE
Source organism: Azoarcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.884 Å
Deposited: 2014-01-08
Authors: Horton, J.R.
PDB entry 4oc9: 2.35 Angstrom resolution crystal structure of putative O-acetylhomoserine (thiol)-lyase (metY) from Campylobacter jejuni subsp. jejuni NCTC 11168 with N'-Pyridoxyl-Lysine-5'-Monophosphate at position 205
Classification: LYASE
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2014-01-08
Authors: Halavaty, A.S., Brunzelle, J.S., Wawrzak, Z., Onopriyenko, O., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4oca: Cryatal structure of ArnB K188A complexted with PLP and UDP-Ara4N
Classification: TRANSFERASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-01-08
Authors: Sousa, M.C., Lee, M.
PDB entry 4ocb: Z-DNA dodecamer d(CGCGCGCGCGCG)2 at 0.75 A resolution solved by P-SAD
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 0.75 Å
Deposited: 2014-01-08
Authors: Luo, Z., Dauter, M., Dauter, Z.
PDB entry 4occ: co-crystal structure of MDM2(17-111) in complex with compound 48
Classification: ligase/ligase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-01-08
Authors: Huang, X.
PDB entry 4ocd: In and Out the minor groove: Interaction of an AT rich-DNA with the CD27 drug
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-01-08
Authors: Acosta-Reyes, F.J., Dardonville, C., de Koning, H.P., Natto, M., Subirana, J.A., Campos, J.L.
PDB entry 4oce: Crystal structure of the disulfide oxidoreductase DsbA from Proteus mirabilis
Classification: OXIDOREDUCTASE
Source organism: Proteus mirabilis HI4320
Experimental method: X-RAY DIFFRACTION
Resolution: 1.768 Å
Deposited: 2014-01-09
Authors: Kurth, F., Martin, J.L.
PDB entry 4ocf: Crystal structure of the disulfide oxidoreductase DsbA (S30XXC33) active site mutant from Proteus mirabilis
Classification: OXIDOREDUCTASE
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.979 Å
Deposited: 2014-01-09
Authors: Kurth, F., Martin, J.L.
PDB entry 4ocg: Structure of the Shewanella loihica PV-4 NADH-dependent persulfide reductase F161A Mutant
Classification: OXIDOREDUCTASE
Source organism: Shewanella loihica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2014-01-09
Authors: Lee, K.-H., Sazinsky, M.H., Crane, E.J.
PDB entry 4och: Apo structure of Smr domain of MutS2 from Deinococcus radiodurans
Classification: HYDROLASE
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4001 Å
Deposited: 2014-01-09
Authors: Zhang, H., Zhao, Y., Xu, Q., Hua, Y.J.
PDB entry 4oci: Crystal Structure of Calcium Binding Protein-5 from Entamoeba histolytica and its involvement in initiation of phagocytosis of human erythrocytes
Classification: SIGNALING PROTEIN
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.009 Å
Deposited: 2014-01-09
Authors: Kumar, S., Manjasetty, A.B., Zaidi, R., Gourinath, S.
PDB entry 4ocj: N-acetylhexosamine 1-phosphate kinase in complex with GlcNAc
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.571 Å
Deposited: 2014-01-09
Authors: Li, T.L., Wang, K.C., Lyu, S.Y., Liu, Y.C., Chang, C.Y., Wu, C.J.
PDB entry 4ock: N-acetylhexosamine 1-phosphate kinase in complex with GlcNAc and AMPPNP
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2014-01-09
Authors: Li, T.L., Wang, K.C., Lyu, S.Y., Liu, Y.C., Chang, C.Y., Wu, C.J.
PDB entry 4ocl: Crystal Structure of the Rpn8-Rpn11 MPN domain heterodimer, crystal form Ia
Classification: HYDROLASE, PROTEIN BINDING
Source organism: Lama glama; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-01-09
Authors: Pathare, G.R., Bracher, A.
PDB entry 4ocm: Crystal Structure of the Rpn8-Rpn11 MPN domain heterodimer, crystal form Ib
Classification: HYDROLASE, PROTEIN BINDING
Source organism: Lama glama; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2014-01-09
Authors: Pathare, G.R., Bracher, A.
PDB entry 4ocn: Crystal Structure of the Rpn8-Rpn11 MPN domain heterodimer, crystal form II
Classification: HYDROLASE, PROTEIN BINDING
Source organism: Lama glama; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2014-01-09
Authors: Pathare, G.R., Bracher, A.
PDB entry 4oco: N-acetylhexosamine 1-phosphate kinase in complex with GlcNAc-1-phosphate
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2014-01-09
Authors: Li, T.L., Wang, K.C., Lyu, S.Y., Liu, Y.C., Chang, C.Y., Wu, C.J.
PDB entry 4ocp: N-acetylhexosamine 1-phosphate kinase in complex with GlcNAc-1-phosphate and ADP
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.938 Å
Deposited: 2014-01-09
Authors: Li, T.L., Wang, K.C., Lyu, S.Y., Liu, Y.C., Chang, C.Y., Wu, C.J.
PDB entry 4ocq: N-acetylhexosamine 1-phosphate kinase in complex with GalNAc
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.878 Å
Deposited: 2014-01-09
Authors: Li, T.L., Wang, K.C., Lyu, S.Y., Liu, Y.C., Chang, C.Y., Wu, C.J.
PDB entry 4ocr: Crystal structure of human Fab CAP256-VRC26.01, a potent V1V2-directed HIV-1 neutralizing antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.895 Å
Deposited: 2014-01-09
Authors: Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.
PDB entry 4ocs: Crystal structure of human Fab CAP256-VRC26.10, a potent V1V2-directed HIV-1 neutralizing antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2014-01-09
Authors: Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.
PDB entry 4oct: Crystal structure of human ALKBH5 crystallized in the presence of Mn^{2+} and 2-oxoglutarate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2014-01-09
Authors: Tempel, W., Chao, X., Liu, K., Dong, A., Cerovina, T., He, H., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 4ocu: N-acetylhexosamine 1-phosphate kinase_ATCC15697 in complex with GlcNAc
Classification: TRANSFERASE
Source organism: Bifidobacterium longum subsp. infantis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.904 Å
Deposited: 2014-01-09
Authors: Li, T.L., Wang, K.C., Lyu, S.Y., Liu, Y.C., Chang, C.Y., Wu, C.J.
PDB entry 4ocv: N-acetylhexosamine 1-phosphate kinase_ATCC15697 in complex with GlcNAc and AMPPNP
Classification: TRANSFERASE
Source organism: Bifidobacterium longum subsp. infantis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.472 Å
Deposited: 2014-01-09
Authors: Li, T.L., Wang, K.C., Lyu, S.Y., Liu, Y.C., Chang, C.Y., Wu, C.J.
PDB entry 4ocw: Crystal structure of human Fab CAP256-VRC26.06, a potent V1V2-directed HIV-1 neutralizing antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.001 Å
Deposited: 2014-01-09
Authors: Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.
PDB entry 4ocx: Fab complex with methotrexate
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2014-01-09
Authors: Longenecker, K.L., Judge, R.A., Gayda, S., Manoj, S., Saldana, S., Ruan, Q., Swift, K., Tetin, S.
PDB entry 4ocy: Fab for methotrexate (unbound apo)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2014-01-09
Authors: Longenecker, K.L., Judge, R.A., Gayda, S., Manoj, S., Saldana, S., Ruan, Q., Swift, K., Tetin, S.
PDB entry 4ocz: Crystal structure of human soluble epoxide hydrolase complexed with 1-(1-isobutyrylpiperidin-4-yl)-3-(4-(trifluoromethyl)phenyl)urea
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2014-01-09
Authors: Lee, K.S.S., Liu, J., Wagner, K.M., Pakhomova, S., Dong, H., Morriseau, C., Fu, S.H., Yang, J., Wang, P., Ulu, A., Mate, C., Nguyen, L., Wullf, H., Eldin, M.L., Mara, A.A., Newcomer, M.E., Zeldin, D.C., Hammock, B.D.
PDB entry 4od0: Crystal structure of human soluble epoxide hydrolase complexed with 1-(1-propanoylpiperidin-4-yl)-3-[4-(trifluoromethoxy)phenyl]urea
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2014-01-09
Authors: Lee, K.S.S., Liu, J., Wagner, K.M., Pakhomova, S., Dong, H., Morisseau, C., Fu, S.H., Yang, J., Wang, P., Ulu, A., Mate, C., Nguyen, L., Wullf, H., Eldin, M.L., Mara, A.A., Newcomer, M.E., Zeldin, D.C., Hammock, B.D.
PDB entry 4od1: Crystal structure of human Fab CAP256-VRC26.03, a potent V1V2-directed HIV-1 neutralizing antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2014-01-09
Authors: Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.
PDB entry 4od2: Crystal structure of the Fab fragment of an anti-DR5 antibody bound to DR5
Classification: APOPTOSIS/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2014-01-09
Authors: Hymowitz, S.G., Compaan, D.
PDB entry 4od3: Crystal structure of human Fab CAP256-VRC26.07, a potent V1V2-directed HIV-1 neutralizing antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.616 Å
Deposited: 2014-01-09
Authors: Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D.
PDB entry 4od4: Apo structure of a UbiA homolog from Aeropyrum pernix K1
Classification: TRANSFERASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 3.301 Å
Deposited: 2014-01-09
Authors: Li, W., Cheng, W.
PDB entry 4od5: Substrate-bound structure of a UbiA homolog from Aeropyrum pernix K1
Classification: TRANSFERASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 3.557 Å
Deposited: 2014-01-10
Authors: Li, W., Cheng, W.
PDB entry 4od6: Structure of Smr domain of MutS2 from Deinococcus radiodurans, Mn2+ soaked
Classification: HYDROLASE
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.199 Å
Deposited: 2014-01-10
Authors: Zhang, H., Zhao, Y., Xu, Q., Hua, Y.J.
PDB entry 4od7: Complex structure of Proteus mirablis DsbA (C30S) with a non-covalently bound peptide PWATCDS
Classification: OXIDOREDUCTASE/PEPTIDE
Source organism: Proteus mirabilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.597 Å
Deposited: 2014-01-10
Authors: Kurth, F., Premkumar, L., Martin, J.L.
PDB entry 4od8: Crystal structure of the vaccinia virus DNA polymerase holoenzyme subunit D4 in complex with the A20 N-terminus
Classification: HYDROLASE/REPLICATION
Source organism: Vaccinia virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-01-10
Authors: Contesto-Richefeu, C., Tarbouriech, N., Brazzolotto, X., Burmeister, W.P., Iseni, F.