LiteFold/PDB huggingface dataset:
PDB entry 8ev6: Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.946 Å
Deposited: 2022-10-19
Authors: Seely, S.M., Gagnon, M.G.
PDB entry 8ev7: Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAs
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2022-10-19
Authors: Seely, S.M., Gagnon, M.G.
PDB entry 8ev8: Cryo-EM structure of cGMP bound truncated human CNGA3/CNGB3 channel in lipid nanodisc, closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2022-10-20
Authors: Hu, Z., Yang, J.
PDB entry 8ev9: Cryo-EM structure of cGMP bound truncated human CNGA3/CNGB3 channel in lipid nanodisc, transition state 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2022-10-20
Authors: Hu, Z., Yang, J.
PDB entry 8eva: Cryo-EM structure of cGMP bound truncated human CNGA3/CNGB3 channel in lipid nanodisc, transition state 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2022-10-20
Authors: Hu, Z., Yang, J.
PDB entry 8evb: Cryo-EM structure of cGMP bound truncated human CNGA3/CNGB3 channel in lipid nanodisc, pre-open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-10-20
Authors: Hu, Z., Yang, J.
PDB entry 8evc: Cryo-EM structure of cGMP bound truncated human CNGA3/CNGB3 channel in lipid nanodisc, open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2022-10-20
Authors: Hu, Z., Yang, J.
PDB entry 8evd: Crystal Structure of Nanobody VHH101 Bound to Its Antigen PA14 Cif
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas aeruginosa PA14; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-20
Authors: Simard, A.R., Taher, N.M., Beauchemin, K.S., Madden, D.R.
PDB entry 8eve: HUMAN DNA POLYMERASE ETA INSERTION COMPLEX
Classification: REPLICATION,TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-10-20
Authors: Pallan, P.S., Egli, M.
PDB entry 8evf: HUMAN DNA POLYMERASE ETA EXTENSION COMPLEX WITH AN INCOMING DCTP
Classification: REPLICATION,TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2022-10-20
Authors: Pallan, P.S., Egli, M.
PDB entry 8evg: 162bp CX3CR1 nucleosome (further classified with better nucleosome end)
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2022-10-20
Authors: Tengfei, L., Ruifang, G., Yawen, B.
PDB entry 8evh: CX3CR1 nucleosome and wild type PU.1 complex
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli; Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2022-10-20
Authors: Lian, T., Guan, R., Bai, Y.
PDB entry 8evi: CX3CR1 nucleosome and PU.1 complex containing disulfide bond mutations
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli; Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2022-10-20
Authors: Lian, T., Guan, R., Bai, Y.
PDB entry 8evj: CX3CR1 nucleosome bound PU.1 and C/EBPa
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli; Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-10-20
Authors: Guan, R., Bai, Y., Lian, T.
PDB entry 8evk: Crystal structure of Helicobacter pylori dihydroneopterin aldolase (DHNA)
Classification: LYASE
Source organism: Helicobacter pylori G27
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-10-20
Authors: Shaw, G.X., Cherry, S., Tropea, J.E., Ji, X.
PDB entry 8evl: Crystal structure of alpha-COPI N-terminal WD40 domain
Classification: PROTEIN TRANSPORT
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-20
Authors: Dey, D., Hasan, S.S.
PDB entry 8evm: De novo design of chlorophyll special pair containing protein assemblies
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2022-10-20
Authors: Bera, A.K., Ennist, N.M.
PDB entry 8evn: Sulfatase from Mycobacterium tuberculosis (Rv3406) in complex with N-oxalylglycine (NOG)
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.644 Å
Deposited: 2022-10-20
Authors: Juan, T.-J., Leung, I., Squire, C.J.
PDB entry 8evo: Sulfatase from Mycobacterium tuberculosis (Rv3406) in complex with inhibitor FG2216
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-10-20
Authors: Juan, T.-J., Leung, I., Squire, C.J.
PDB entry 8evp: Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; Taura syndrome virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.38 Å
Deposited: 2022-10-20
Authors: Zhao, Y., Rai, J., Li, H.
PDB entry 8evq: Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2022-10-20
Authors: Zhao, Y., Rai, J., Li, H.
PDB entry 8evr: Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II
Classification: Ribosome/RNA
Source organism: Saccharomyces cerevisiae; Taura syndrome virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2022-10-20
Authors: Zhao, Y., Rai, J., Li, H.
PDB entry 8evs: Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2022-10-20
Authors: Zhao, Y., Rai, J., Li, H.
PDB entry 8evt: Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map
Classification: RIBOSOME/RNA
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2022-10-20
Authors: Zhao, Y., Rai, J., Li, H.
PDB entry 8evu: Cryo EM structure of Vibrio cholerae NQR
Classification: ELECTRON TRANSPORT, TRANSLOCASE
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5804 Å
Deposited: 2022-10-20
Authors: Fuller, J.R., Juarez, O.
PDB entry 8evv: Apo form of DdlA from Pseudomonas aeruginosa PAO1
Classification: LIGASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-10-21
Authors: Pederick, J.L., Woolman, J.C., Bruning, J.B.
PDB entry 8evw: DdlA from Pseudomonas aeruginosa PAO1 in complex with ATP and D-ala-D-ala
Classification: LIGASE/PRODUCT
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2022-10-21
Authors: Pederick, J.L., Woolman, J.C., Bruning, J.B.
PDB entry 8evx: DdlA from Pseudomonas aeruginosa PAO1 in complex with ADP and phosphorylated D-cycloserine
Classification: LIGASE/INHIBITOR
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-10-21
Authors: Pederick, J.L., Woolman, J.C., Bruning, J.B.
PDB entry 8evy: DdlB from Pseudomonas aeruginosa PAO1 in complex with ATP and D-ala-D-ala
Classification: LIGASE/PRODUCT
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-10-21
Authors: Pederick, J.L., Woolman, J.C., Bruning, J.B.
PDB entry 8evz: DdlB from Pseudomonas aeruginosa PAO1 in complex with ADP and phosphorylated D-cycloserine
Classification: LIGASE/INHIBITOR
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-10-21
Authors: Pederick, J.L., Woolman, J.C., Bruning, J.B.
PDB entry 8ew0: Cryo-EM structure of glutamate dehydrogenase frozen at various temperature
Classification: LYASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-10-21
Authors: Shi, H., Wu, C., Zhang, X.
PDB entry 8ew1: Structure of Bacple_01703-E145L
Classification: HYDROLASE
Source organism: Phocaeicola plebeius DSM 17135
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-21
Authors: Ulaganathan, T., Cygler, M.
PDB entry 8ew2: Cryo-EM structure of Aldolase embedded in crystalline ice
Classification: LYASE
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-21
Authors: Shi, H., Wu, C., Zhang, X.
PDB entry 8ew3: Cryo EM structure of Vibrio cholerae NQR
Classification: ELECTRON TRANSPORT, TRANSLOCASE
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65159 Å
Deposited: 2022-10-21
Authors: Fuller, J.R., Juarez, O.
PDB entry 8ew4: Human Serum Albumin with Cobalt (II) and Myristic Acid - crystal 1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-10-21
Authors: Gucwa, M., Cooper, D.R., Unciano, J., Lea, K., Kim, L., Lenkiewicz, J., Starban, I., Stewart, A.J., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8ew5: The structure of flightin within myosin thick filaments from Bombus ignitus flight muscle
Classification: STRUCTURAL PROTEIN
Source organism: Bombus ignitus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2022-10-21
Authors: Li, J., Rahmani, H., Abbasi Yeganeh, F., Rastegarpouyani, H., Taylor, D.W., Wood, N.B., Previs, M.J., Iwamoto, H., Taylor, K.A.
PDB entry 8ew6: Anti-human CD8 VHH complex with CD8 alpha
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.904 Å
Deposited: 2022-10-21
Authors: Kiefer, J.R., Williams, S., Davies, C.W., Koerber, J.T., Sriraman, S.K., Yin, Y.P.
PDB entry 8ew7: Human Serum Albumin with Cobalt (II) and Myristic Acid - crystal 2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2022-10-21
Authors: Gucwa, M., Cooper, D.R., Stewart, A.J., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8ew8: Crystal structure of Saccharomyces cerevisiae Altered Inheritance rate of Mitochondria protein 18 (AIM18p) R123A mutant
Classification: UNKNOWN FUNCTION
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-21
Authors: Bingman, C.A., Schmitz, J.M., Smith, R.W., Pagliarini, D.J.
PDB entry 8ew9: Crystal structure of Saccharomyces cerevisiae Altered Inheritance rate of Mitochondria protein 46 (AIM46p)
Classification: UNKNOWN FUNCTION
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-21
Authors: Bingman, C.A., Schmitz, J.M., Smith, R.W., Pagliarini, D.J., Mitochondrial Protein Partnership (MPP)
PDB entry 8ewa: Crystal Structure of UDP-N-acetylmuramate-L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase, MurC) Pseudomonas aeruginosa in complex with ligand AZ-13644923
Classification: LIGASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-10-21
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8ewb: Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2022-10-22
Authors: Zhao, Y., Rai, J., Li, H.
PDB entry 8ewc: Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; Taura syndrome virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2022-10-22
Authors: Zhao, Y., Rai, J., Li, H.
PDB entry 8ewd: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-10-22
Authors: Sevrioukova, I.F.
PDB entry 8ewe: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-22
Authors: Sevrioukova, I.F.
PDB entry 8ewf: CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor
Classification: VIRAL PROTEIN
Source organism: Anas platyrhynchos; Chikungunya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2022-10-22
Authors: Zimmerman, M.I., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8ewg: Cryo-EM structure of a riboendonclease
Classification: Hydrolase/RNA
Source organism: Thermoclostridium caenicola; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-10-23
Authors: Li, Z., Wang, F.
PDB entry 8ewh: Salmonella typhimurium GTPase BIPA
Classification: TRANSLATION
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2022-10-23
Authors: Brown, R.S., deLivron, M.A., Robinson, V.L.
PDB entry 8ewi: Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a tetrameric form
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-10-23
Authors: Wang, F., He, Q., Lin, G., Li, H.
PDB entry 8ewl: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-10-24
Authors: Sevrioukova, I.F.
PDB entry 8ewm: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-24
Authors: Sevrioukova, I.F.
PDB entry 8ewn: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-10-24
Authors: Sevrioukova, I.F.
PDB entry 8ewo: Crystal structure of putative glyoxylase II from Pseudomonas aeruginosa
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2022-10-24
Authors: Stogios, P.J., Skarina, T., Endres, M., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8ewp: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-10-24
Authors: Sevrioukova, I.F.
PDB entry 8ewq: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-10-24
Authors: Sevrioukova, I.F.
PDB entry 8ewr: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-10-24
Authors: Sevrioukova, I.F.
PDB entry 8ews: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-24
Authors: Sevrioukova, I.F.
PDB entry 8ewt: Bile salt hydrolase A from Lactobacillus gasseri bound to covalent probe
Classification: HYDROLASE
Source organism: Lactobacillus gasseri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2022-10-24
Authors: Walker, M.E., Redinbo, M.R.
PDB entry 8ewu: X-ray structure of the GDP-6-deoxy-4-keto-D-lyxo-heptose-4-reductase from Campylobacter jejuni HS:15
Classification: BIOSYNTHETIC PROTEIN, OXIDOREDUCTASE
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-10-24
Authors: Thoden, J.B., Xiang, D.F., Ghosh, M.K., Riegert, A.S., Raushel, F.M., Holden, H.M.
PDB entry 8ewv: DNA-encoded library (DEL)-enabled discovery of proximity inducing small molecules
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2022-10-24
Authors: Schreiber, S.L., Shu, W., Ma, X., Michaud, G., Bonazzi, S., Berst, F.
PDB entry 8eww: Structure of Arabidopsis fatty acid amide hydrolase mutant S305A
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-10-24
Authors: Aziz, M., Wang, X., Gaguancela, O.A., Chapman, K.D.
PDB entry 8ewx: N-terminal WD40 domain of beta'-COPI subunit with two chains in the asymmetric unit
Classification: CYTOSOLIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2022-10-24
Authors: Dey, D., Hasan, S.S.
PDB entry 8ewy: Structure of Janus Kinase (JAK) dimer complexed with cytokine receptor intracellular domain
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.5 Å
Deposited: 2022-10-24
Authors: Caveney, N.A., Saxton, R.A., Waghray, D., Garcia, K.C.
PDB entry 8ewz: Plasmodium falciparum M1 in complex with inhibitor 9c
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-10-24
Authors: Calic, P.P.S., McGowan, S., Webb, C.T.
PDB entry 8ex0: Crystal structure of JAK2 JH2 (pseudokinase domain) in complex with CDK2-IV
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-10-24
Authors: Sampathkumar, P., Hubbard, S.R.
PDB entry 8ex1: Crystal structure of JAK2 JH2 (pseudokinase domain) in complex with Reversine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-10-24
Authors: Sampathkumar, P., Hubbard, S.R.
PDB entry 8ex2: Crystal structure of JAK2 JH2 (pseudokinase domain) in complex with HTSA3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-24
Authors: Sampathkumar, P., Hubbard, S.R.
PDB entry 8ex3: Plasmodium falciparum M1 in complex with inhibitor 9aa
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-24
Authors: Calic, P.P.S., McGowan, S., Webb, C.T.
PDB entry 8ex4: Human S1P transporter Spns2 in an inward-facing open conformation (state 1)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2022-10-24
Authors: Ahmed, S., Zhao, H., Dai, Y., Lee, C.H.
PDB entry 8ex5: Human S1P transporter Spns2 in an outward-facing open conformation (state 4)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2022-10-24
Authors: Ahmed, S., Zhao, H., Dai, Y., Lee, C.H.
PDB entry 8ex6: Human S1P transporter Spns2 in an inward-facing open conformation (state 1*)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2022-10-24
Authors: Ahmed, S., Zhao, H., Dai, Y., Lee, C.H.
PDB entry 8ex7: Human S1P transporter Spns2 in an outward-facing partially occluded conformation (state 3)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2022-10-24
Authors: Ahmed, S., Zhao, H., Dai, Y., Lee, C.H.
PDB entry 8ex8: Human S1P transporter Spns2 in an outward-facing partially occluded conformation (state 2)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2022-10-24
Authors: Ahmed, S., Zhao, H., Dai, Y., Lee, C.H.
PDB entry 8ex9: ISDra2 TnpB in complex with reRNA and cognate DNA, conformation 2 (RuvC domain unresolved)
Classification: RNA BINDING PROTEIN
Source organism: Deinococcus radiodurans R1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2022-10-25
Authors: Sasnauskas, G., Tamulaitiene, G., Carabias, A., Karvelis, T., Druteika, G., Silanskas, A., Montoya, G., Venclovas, C., Kazlauskas, D., Siksnys, V.
PDB entry 8exa: ISDra2 TnpB in complex with reRNA and cognate DNA, conformation 1 (RuvC domain resolved)
Classification: RNA BINDING PROTEIN
Source organism: Deinococcus radiodurans R1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2022-10-25
Authors: Sasnauskas, G., Tamulaitiene, G., Carabias, A., Karvelis, T., Druteika, G., Silanskas, A., Montoya, G., Venclovas, C., Kazlauskas, D., Siksnys, V.
PDB entry 8exb: Crystal structure of CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-10-25
Authors: Sevrioukova, I.F.
PDB entry 8exc: Human Carbonic Anhydrase II bound tert-butyl (3-(4-(3-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)propoxy)butoxy)propyl)carbamate
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-25
Authors: Kohlbrand, A.J., O'Herin, C.B.
PDB entry 8exd: Crystal structure of Aspergillus fumigatus sterylglucosidase A
Classification: HYDROLASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2022-10-25
Authors: Pereira de Sa, N., Del Poeta, M., Airola, M.V.
PDB entry 8exe: Crystal structure of human FAM46A-BCCIPa complex at 3.5 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2022-10-25
Authors: Liu, S., Zhang, X.
PDB entry 8exf: Crystal structure of human FAM46A-BCCIPa complex at 3.2 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.22 Å
Deposited: 2022-10-25
Authors: Liu, S., Zhang, X.
PDB entry 8exg: Human Carbonic Anhydrase II bound N-(2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)-4-sulfamoylbenzamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2022-10-25
Authors: Kohlbrand, A.J., O'Herin, C.B.
PDB entry 8exh: Agrobacterium tumefaciens Tpilus
Classification: PROTEIN FIBRIL
Source organism: Agrobacterium fabrum (strain C58 / ATCC 33970)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-10-25
Authors: Beltran, L.C., Egelman, E.H.
PDB entry 8exi: Crystal structure of apo PTP1B D181A/Q262A phosphatase domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.599 Å
Deposited: 2022-10-25
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 8exj: Crystal structure of PTP1B D181A/Q262A phosphatase domain in complex with a JAK1 activation loop phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2022-10-25
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 8exk: Crystal structure of PTP1B D181A/Q262A phosphatase domain with JAK2 activation loop phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.096 Å
Deposited: 2022-10-25
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 8exl: Crystal structure of PI3K-alpha in complex with taselisib
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.989 Å
Deposited: 2022-10-25
Authors: Kiefer, J.R., Eigenbrot, C., Staben, S.T., Hanan, E.J., Wallweber, H.J.A., Ultsch, M., Braun, M.G., Friedman, L.S., Purkey, H.E.
PDB entry 8exm: Crystal structure of PTP1B D181A/Q262A phosphatase domain with a JAK3 activation loop phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.349 Å
Deposited: 2022-10-25
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 8exn: Crystal structure of PTP1B D181A/Q262A phosphatase domain with TYK2 activation loop phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.151 Å
Deposited: 2022-10-25
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 8exo: Crystal structure of PI3K-alpha in complex with compound 19
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2022-10-25
Authors: Kiefer, J.R., Eigenbrot, C., Staben, S.T., Hanan, E.J., Wallweber, H.J.A., Ultsch, M., Braun, M.G., Friedman, L.S., Purkey, H.E.
PDB entry 8exp: Cryo-EM structure of S. aureus BlaR1 with C2 symmetry
Classification: SIGNALING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-10-25
Authors: Worrall, L.J., Alexander, J.A.N., Vuckovic, M., Strynadka, N.C.J.
PDB entry 8exq: Cryo-EM structure of S. aureus BlaR1 with C1 symmetry
Classification: SIGNALING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2022-10-25
Authors: Worrall, L.J., Alexander, J.A.N., Vuckovic, M., Strynadka, N.C.J.
PDB entry 8exr: Cryo-EM structure of S. aureus BlaR1 TM and zinc metalloprotease domain
Classification: SIGNALING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-10-25
Authors: Worrall, L.J., Alexander, J.A.N., Vuckovic, M., Strynadka, N.C.J.
PDB entry 8exs: Cryo-EM structure of S. aureus BlaR1 F284A mutant
Classification: SIGNALING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2022-10-25
Authors: Alexander, J.A.N., Hu, J., Worrall, L.J., Strynadka, N.C.J.
PDB entry 8ext: Cryo-EM structure of S. aureus BlaR1 F284A mutant in complex with ampicillin
Classification: SIGNALING PROTEIN/ANTIBIOTIC
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-10-25
Authors: Alexander, J.A.N., Hu, J., Worrall, L.J., Strynadka, N.C.J.
PDB entry 8exu: Crystal structure of PI3K-alpha in complex with compound 30
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2022-10-25
Authors: Kiefer, J.R., Eigenbrot, C., Staben, S.T., Hanan, E.J., Wallweber, H.J.A., Ultsch, M., Braun, M.G., Friedman, L.S., Purkey, H.E.
PDB entry 8exv: Crystal structure of PI3K-alpha in complex with compound 32
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2022-10-25
Authors: Kiefer, J.R., Eigenbrot, C., Staben, S.T., Hanan, E.J., Wallweber, H.J.A., Ultsch, M., Braun, M.G., Friedman, L.S., Purkey, H.E.
PDB entry 8exw: Drosophila melanogaster indirect flight muscle myosin II (subfragment-1)
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-10-25
Authors: Caldwell, J.T., Huxford, T., Bernstein, S.I., Stec, B.
PDB entry 8exx: Herpes simplex virus 1 polymerase holoenzyme bound to DNA and foscarnet (pre-translocation state)
Classification: VIRAL PROTEIN/DNA
Source organism: Human alphaherpesvirus 1 strain KOS; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-10-26
Authors: Pan, J., Abraham, J., Coen, D.M., Shankar, S., Yang, P., Hogle, J.
PDB entry 8exy: M. tuberculosis RNAP paused complex with B. subtilis NusG and GMPCPP
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis subsp. subtilis str. 168; Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-10-26
Authors: Vishwakarma, R.K., Murakami, K.S.
PDB entry 8exz: Structure of GDAP1 containing CMT mutant T157P
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2022-10-26
Authors: Googins, M.R., VanDemark, A.P.
PDB entry 8ey0: Structure of an orthogonal PYR1*:HAB1* chemical-induced dimerization module in complex with mandipropamid
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-10-26
Authors: Park, S.-Y., Volkman, B.F., Cutler, S.R., Peterson, F.C.
PDB entry 8ey1: Structure of Arabidopsis fatty acid amide hydrolase mutant S305A in complex with N-(3-oxododecanoyl)-L-homoserine lactone
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2022-10-26
Authors: Aziz, M., Wang, X., Gaguancela, O.A., Chapman, K.D.
PDB entry 8ey2: Cryo-EM structure of SARS-CoV-2 Main protease C145S in complex with N-terminal peptide
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-10-26
Authors: Noske, G.D., Song, Y., Fernandes, R.S., Oliva, G., Godoy, A.S.
PDB entry 8ey3: Contact-dependent growth inhibition (CDI) immunity protein from E. coli O32:H37
Classification: TOXIN
Source organism: Escherichia coli O32:H37
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2022-10-26
Authors: Michalska, K., Stols, L., Eschenfeldt, W., Goulding, C.W., Hayes, C.S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 8ey4: Contact-dependent growth inhibition toxin-immunity protein complex from E. coli O32:H37
Classification: TOXIN
Source organism: Escherichia coli O32:H37
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-10-26
Authors: Michalska, K., Stols, L., Eschenfeldt, W., Goulding, C.W., Hayes, C.S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 8ey5: Human Serum Albumin with Cobalt (II) and Myristic Acid - crystal 3
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-10-26
Authors: Gucwa, M., Cooper, D.R., Stewart, A.J., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8ey6: LaM domain of human LARP1 in complex with AAAAAG RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-10-26
Authors: Kozlov, G., Gehring, K.
PDB entry 8ey7: LaM domain of human LARP1 in complex with AAAGAA RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-10-26
Authors: Kozlov, G., Gehring, K.
PDB entry 8ey8: LaM domain of human LARP1 in complex with AAAAGA RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-10-26
Authors: Kozlov, G., Gehring, K.
PDB entry 8ey9: Structure of Arabidopsis fatty acid amide hydrolase mutant S305A in complex with 9-hydroxy-10,12-octadecadienoyl-ethanolamide
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.59 Å
Deposited: 2022-10-26
Authors: Aziz, M., Wang, X., Gaguancela, O.A., Chapman, K.D.
PDB entry 8eya: Crystal structure of PTP1B D181A/Q262A/C215A phosphatase domain with a JAK2 activation loop phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.099 Å
Deposited: 2022-10-26
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 8eyb: Crystal structure of PTP1B D181A/Q262A/C215A phosphatase domain with JAK2 activation loop phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.349 Å
Deposited: 2022-10-26
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 8eyc: Crystal structure of PTP1B D181A/Q262A/C215A phosphatase domain with TYK2 activation loop phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2022-10-26
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 8eyd: Plasmodium falciparum M1 in complex with inhibitor 15ah
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-10-26
Authors: Calic, P.P.S., McGowan, S., Webb, C.T.
PDB entry 8eye: Plasmodium falciparum M1 in complex with inhibitor 9aj
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-10-26
Authors: Calic, P.P.S., McGowan, S., Webb, C.T.
PDB entry 8eyf: Plasmodium falciparum M1 in complex with inhibitor 15aa
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-26
Authors: Calic, P.P.S., McGowan, S., Webb, C.T.
PDB entry 8eyg: SARS-CoV-2 spike protein complexed with two nanobodies
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2022-10-27
Authors: Laughlin, Z.T., Patel, A., Ortlund, E.A.
PDB entry 8eyh: SARS-CoV-2 spike protein bound with a nanobody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2022-10-27
Authors: Laughlin, Z.T., Patel, A., Ortlund, E.A.
PDB entry 8eyi: Atomic model of the core modifying region of human fatty acid synthase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-10-27
Authors: Hasan, S.M.N., Keszei, A., Mazhab-Jafari, M.T.
PDB entry 8eyj: Crystal Structure of uncleaved SARS-CoV-2 Main Protease C145S mutant in complex with Nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.738 Å
Deposited: 2022-10-27
Authors: Noske, G.D., Godoy, A.S., Oliva, G.
PDB entry 8eyk: Atomic model of the core modifying region of human fatty acid synthase in complex with TVB-2640
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-10-27
Authors: Hasan, S.M.N., Keszei, A., Mazhab-Jafari, M.T.
PDB entry 8eyl: Human Carbonic Anhydrase II with Tert-butyl (2-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)ethoxy)ethyl)carbamate
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2022-10-27
Authors: Kohlbrand, A.J., O'Herin, C.B.
PDB entry 8eym: CRYSTAL STRUCTURE OF NAGB-II PHOSPHOSUGAR ISOMERASE FROM SHEWANELLA DENITRIFICANS OS217 IN COMPLEX WITH GLUCITOLAMINE-6-PHOSPHATE AND N-ACETYLGLUCOSAMINE-6-PHOSPHATE AT 2.31 A RESOLUTION
Classification: ISOMERASE
Source organism: Shewanella denitrificans OS217
Experimental method: X-RAY DIFFRACTION
Resolution: 2.311 Å
Deposited: 2022-10-27
Authors: Rodriguez-Hernandez, A., Marcos-Viquez, J., Rodriguez-Romero, A., Bustos-Jaimes, I.
PDB entry 8eyn: Crystal Structure of Human Mitochondrial NADP+ Malic Enzyme 3 in Apo Form
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-10-28
Authors: Shaffer, P.L., Grell, T.A.J., Mason, M., Thompson, A.A., Riley, D., Wagner, M.V., Steele, R., Ortiz-Meoz, R., Wadia, J., Sharma, S., Yu, X.
PDB entry 8eyo: Crystal Structure of Human Mitochondrial NADP+ Malic Enzyme 3 with NADP bound
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2022-10-28
Authors: Shaffer, P.L., Grell, T.A.J., Mason, M., Thompson, A.A., Riley, D., Wagner, M.V., Steele, R., Ortiz-Meoz, R., Wadia, J., Sharma, S., Yu, X.
PDB entry 8eyp: Joint X-ray/neutron structure of Salmonella typhimurium tryptophan synthase internal aldimine from microgravity-grown crystal
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhi; Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2022-10-28
Authors: Drago, V.N., Kovalevsky, A., Blakeley, M.P., Forsyth, V.T., Mueser, T.C.
PDB entry 8eyq: 30S_delta_ksgA_h44_inactive_conformation
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-10-28
Authors: Ortega, J., Sun, J.
PDB entry 8eyr: Cryo-EM structure of two IGF1 bound full-length mouse IGF1R mutant (four glycine residues inserted in the alpha-CT; IGF1R-P674G4): symmetric conformation
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-10-28
Authors: Li, J., Wu, J.Y., Hall, C., Bai, X.C., Choi, E.
PDB entry 8eys: X-ray crystal structure of salmonella typhimurium Tryptophan synthase internal aldimine at pH 5.0
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-10-28
Authors: Drago, V.N., Kovalevsky, A.Y., Mueser, T.C.
PDB entry 8eyt: 30S_delta_ksgA+KsgA complex
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-10-28
Authors: Sun, J., Kinman, L.F., Jahagirdar, D., Ortega, J., Davis, J.H.
PDB entry 8eyu: Structure of Beetroot dimer bound to DFAME
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-10-28
Authors: Passalacqua, L.F.M., Ferre-D'Amare, A.R.
PDB entry 8eyv: Structure of Beetroot dimer bound to DFHO
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-10-28
Authors: Passalacqua, L.F.M., Ferre-D'Amare, A.R.
PDB entry 8eyw: Beetroot dimer bound to ThT
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-10-28
Authors: Passalacqua, L.F.M., Ferre-D'Amare, A.R.
PDB entry 8eyx: Cryo-EM structure of 4 insulins bound full-length mouse IR mutant with physically decoupled alpha CTs (C684S/C685S/C687S; denoted as IR-3CS) Asymmetric conformation 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-10-29
Authors: Li, J., Wu, J.Y., Hall, C., Bai, X.C., Choi, E.
PDB entry 8eyy: Cryo-EM structure of 4 insulins bound full-length mouse IR mutant with physically decoupled alpha CTs (C684S/C685S/C687S, denoted as IR-3CS) Asymmetric conformation 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2022-10-29
Authors: Li, J., Wu, J.Y., Hall, C., Bai, X.C., Choi, E.
PDB entry 8eyz: Engineered glutamine binding protein bound to GLN and a cobaloxime ligand
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2022-10-29
Authors: Bridwell-Rabb, J., Boggs, D.G., Olshansky, L., Fatima, S., Thompson, P.
PDB entry 8ez0: Cryo-EM structure of 4 insulins bound full-length mouse IR mutant with physically decoupled alpha CTs (C684S/C685S/C687S; denoted as IR-3CS) Symmetric conformation
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-10-29
Authors: Li, J., Wu, J.Y., Hall, C., Bai, X.C., Choi, E.
PDB entry 8ez1: Human Ornithine Aminotransferase (hOAT) co-crystallized with its inactivator 3-Amino-4-fluorocyclopentenecarboxylic Acid
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2022-10-30
Authors: Butrin, A., Shen, S., Silverman, R., Liu, D.
PDB entry 8ez2: Plasmodium falciparum M1 in complex with inhibitor 15ag
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-10-31
Authors: Calic, P.P.S., McGowan, S., Webb, C.T.
PDB entry 8ez3: Structure of 3A10 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Classification: Hydrolase/Immune System
Source organism: Homo sapiens; Influenza A virus (A/Moscow/10/1999(H3N2))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-10-31
Authors: Mou, Z., Lei, R., Wu, N.C., Dai, X.
PDB entry 8ez4: Plasmodium falciparum M17 in complex with inhibitor 9aa
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-10-31
Authors: Calic, P.P.S., McGowan, S., Webb, C.T.
PDB entry 8ez5: RT XFEL structure of the two-flash state of Photosystem II (2F, S3-rich) at 2.09 Angstrom resolution
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus vestitus BP-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-10-31
Authors: Bhowmick, A., Hussein, R., Bogacz, I., Simon, P.S., Ibrahim, M., Chatterjee, R., Doyle, M.D., Cheah, M.H., Fransson, T., Chernev, P., Kim, I.-S., Makita, H., Dasgupta, M., Kaminsky, C.J., Zhang, M., Gatcke, J., Haupt, S., Nangca, I.I., Keable, S.M., Aydin, O., Tono, K., Owada, S., Gee, L.B., Fuller, F.D., Batyuk, A., Alonso-Mori, R., Holton, J.M., Paley, D.W., Moriarty, N.W., Mamedov, F., Adams, P.D., Brewster, A.S., Dobbek, H., Sauter, N.K., Bergmann, U., Zouni, A., Messinger, J., Kern, J., Yano, J., Yachandra, V.K.
PDB entry 8ez6: The DBC1/SIRT1 Interaction is Choreographed by Post-translational Modification
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-31
Authors: Krzysiak, T.C., Gronenborn, A.M.
PDB entry 8ez7: Structure of 1F04 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Classification: Hydrolase/Immune System
Source organism: Homo sapiens; Influenza A virus (A/Moscow/10/1999(H3N2))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-10-31
Authors: Mou, Z., Lei, R., Wu, N.C., Dai, X.
PDB entry 8ez8: Structure of 3C08 Fab in complex with A/Moscow/10/1999 (H3N2) influenza virus neuraminidase
Classification: Hydrolase/Immune System
Source organism: Homo sapiens; Influenza A virus (A/Moscow/10/1999(H3N2))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2022-10-31
Authors: Mou, Z., Lei, R., Wu, N.C., Dai, X.
PDB entry 8ez9: Dimeric complex of DNA-PKcs
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.67 Å
Deposited: 2022-10-31
Authors: Chen, S., He, Y.
PDB entry 8eza: NHEJ Long-range complex with PAXX
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.39 Å
Deposited: 2022-10-31
Authors: Chen, S., He, Y.
PDB entry 8ezb: NHEJ Long-range complex with ATP
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.9 Å
Deposited: 2022-10-31
Authors: Chen, S., He, Y.
PDB entry 8ezc: X-ray crystal structure of salmonella typhimurium Tryptophan synthase internal aldimine
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-31
Authors: Drago, V.N., Mueser, T.C.
PDB entry 8ezd: Brain-derived 42-residue amyloid-beta fibril type A
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2022-10-31
Authors: Tycko, R., Lee, M., Yau, Y.-M., Louis, J.M.
PDB entry 8eze: Brain-derived 42-residue amyloid-beta fibril type B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2022-10-31
Authors: Tycko, R., Lee, M., Yau, Y.-M., Louis, J.M.
PDB entry 8ezf: A tethered niacin-derived pincer complex with a nickel-carbon or sulfite-carbon bond in lactate racemase R98A/R100A variant
Classification: ISOMERASE
Source organism: Lactiplantibacillus plantarum WCFS1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-31
Authors: Gatreddi, S., Hausinger, R.P., Hu, J.
PDB entry 8ezg: Monobody 12D1 bound to KRAS(G12D)
Classification: SIGNALING PROTEIN/DE NOVO PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2022-10-31
Authors: Hattori, T., Glasser, E., Akkapeddi, P., Ketavarapu, G., Teng, K.W., Koide, A., Koide, S.
PDB entry 8ezh: A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase R98A/R100A variant modeled with sulfite-NPN adduct
Classification: ISOMERASE
Source organism: Lactiplantibacillus plantarum WCFS1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2022-10-31
Authors: Gatreddi, S., Hausinger, R.P., Hu, J.