LiteFold/PDB huggingface dataset:
PDB entry 7xz0: TRIM E3 ubiquitin ligase
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2022-06-02
Authors: Park, S.H., Song, H.K.
PDB entry 7xz1: TRIM E3 ubiquitin ligase
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 5.2 Å
Deposited: 2022-06-02
Authors: Park, S.H., Song, H.K.
PDB entry 7xz2: TRIM E3 ubiquitin ligase
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2022-06-02
Authors: Park, S.H., Song, H.K.
PDB entry 7xz3: Crystal structure of the Type I-B CRISPR-associated protein, Csh2 from Thermobaculum terrenum
Classification: TRANSFERASE
Source organism: Thermobaculum terrenum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.889 Å
Deposited: 2022-06-02
Authors: Seo, P.W., Gu, D.H., Park, S.Y., Kim, J.S.
PDB entry 7xz4: Crystal structure of ferritin from Setaria italica
Classification: METAL BINDING PROTEIN
Source organism: Setaria italica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-06-02
Authors: Wang, W.M., Wang, Y., Wang, H.F.
PDB entry 7xz5: GPR119-Gs-LPC complex
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-02
Authors: Xu, P., Huang, S., Jiang, Y., Xu, H.E.
PDB entry 7xz6: GPR119-Gs-APD668 complex
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-06-02
Authors: Xu, P., Huang, S., Jiang, Y., Xu, H.E.
PDB entry 7xz7: Mutant (D137A) of the N-terminal domain of fucoidan lyase FdlA
Classification: LYASE
Source organism: Flavobacteriaceae bacterium SA-0082
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2022-06-02
Authors: Wang, J., Li, M., Pan, X.
PDB entry 7xz8: Mutant (K141A) of the N-terminal domain of fucoidan lyase FdlA
Classification: LYASE
Source organism: Flavobacteriaceae bacterium SA-0082
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-06-02
Authors: Wang, J., Li, M., Pan, X.
PDB entry 7xz9: Mutant (E236A) of the N-terminal domain of fucoidan lyase FdlA
Classification: LYASE
Source organism: Flavobacteriaceae bacterium SA-0082
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-06-02
Authors: Wang, J., Li, M., Pan, W.
PDB entry 7xza: Mutant (Y242F) of the N-terminal domain of fucoidan lyase FdlA
Classification: LYASE
Source organism: Flavobacteriaceae bacterium SA-0082
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-06-02
Authors: Wang, J., Li, M., Pan, X.
PDB entry 7xzb: Mutant (Y242A) of the N-terminal domain of fucoidan lyase FdlA
Classification: LYASE
Source organism: Flavobacteriaceae bacterium SA-0082
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-06-02
Authors: Wang, J., Li, M., Pan, X.
PDB entry 7xzc: Mutant (R240A) of the N-terminal domain of fucoidan lyase FdlA
Classification: LYASE
Source organism: Flavobacteriaceae bacterium SA-0082
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-06-02
Authors: Wang, J., Li, M., Pan, X.
PDB entry 7xzd: Mutant (F179A) of the N-terminal domain of fucoidan lyase FdlA
Classification: LYASE
Source organism: Flavobacteriaceae bacterium SA-0082
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-06-02
Authors: Wang, J., Li, M., Pan, X.
PDB entry 7xze: Mutant (H176A) of the N-terminal domain of fucoidan lyase FdlA
Classification: LYASE
Source organism: Flavobacteriaceae bacterium SA-0082
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-02
Authors: Wang, J., Li, M., Pan, X.
PDB entry 7xzf: Wild type of the N-terminal domain of fucoidan lyase FdlA
Classification: LYASE
Source organism: Flavobacteriaceae bacterium SA-0082
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-06-02
Authors: Wang, J., Li, M., Pan, X.
PDB entry 7xzg: High resolution crystal Structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans complexed with NAD+
Classification: OXIDOREDUCTASE
Source organism: Candida albicans SC5314
Experimental method: X-RAY DIFFRACTION
Resolution: 1.879 Å
Deposited: 2022-06-02
Authors: Cao, H., Meng, J., Ren, Y., Wan, J.
PDB entry 7xzh: Cryo-EM structure of human LRRC8A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2022-06-02
Authors: Liu, H., Liao, J.
PDB entry 7xzi: Cryo-EM structure of TOC-TIC supercomplex from Chlamydomonas reinhardtii
Classification: TRANSLOCASE
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2022-06-02
Authors: Liu, H., Li, A.J., Liu, Z.F.
PDB entry 7xzj: Cryo-EM structure of TOC complex from Chlamydomonas reinhardtii.
Classification: TRANSLOCASE
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2022-06-02
Authors: Liu, H., Li, A.J., Liu, Z.F.
PDB entry 7xzk: Crystal Structure of P450BM3 with N-(3-cyclohexylpropanoyl)-L-pipecolyl-L-phenylalanine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-06-02
Authors: Shoji, O., Yonemura, K.
PDB entry 7xzn: Formate-tetrahydrofolate ligase from Peptostreptococcus anaerobius
Classification: LIGASE
Source organism: Peptostreptococcus anaerobius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2022-06-03
Authors: Fang, C.L., Zhang, Y.
PDB entry 7xzo: Formate-tetrahydrofolate ligase in complex with ATP
Classification: LIGASE
Source organism: Peptostreptococcus anaerobius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2022-06-03
Authors: Fang, C.L., Zhang, Y.
PDB entry 7xzp: Formate-tetrahydrofolate ligase in complex with berberine
Classification: LIGASE
Source organism: Peptostreptococcus anaerobius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2022-06-03
Authors: Fang, C.L., Zhang, Y.
PDB entry 7xzq: Crystal structure of TNIK-thiopeptide TP1 complex
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-06-03
Authors: Hamada, K., Vinogradov, A.A., Zhang, Y., Chang, J.S., Nishimura, H., Goto, Y., Onaka, H., Suga, H., Ogata, K., Sengoku, T.
PDB entry 7xzr: Crystal structure of TNIK-AMPPNP-thiopeptide TP15 complex
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2022-06-03
Authors: Hamada, K., Vinogradov, A.A., Zhang, Y., Chang, J.S., Nishimura, H., Goto, Y., Onaka, H., Suga, H., Ogata, K., Sengoku, T.
PDB entry 7xzs: Crystal structure of Ricin A chain bound with (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)-L-tyrosine
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7xzt: Crystal structure of Ricin A chain bound with (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)-D-tyrosine
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7xzu: Crystal structure of Ricin A chain bound with (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)-L-phenylalanine
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7xzw: Crystal structure of Ricin A chain bound with (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)-D-phenylalanine
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7xzx: Cryo-EM structure of the nucleosome in complex with p53 DNA-binding domain
Classification: GENE REGURATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.53 Å
Deposited: 2022-06-03
Authors: Nishimura, M., Nozawa, K., Takizawa, Y., Kurumizaka, H.
PDB entry 7xzy: Cryo-EM structure of the nucleosome containing 193 base-pair DNA with a p53 target sequence
Classification: GENE REGURATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.97 Å
Deposited: 2022-06-03
Authors: Nishimura, M., Nozawa, K., Takizawa, Y., Kurumizaka, H.
PDB entry 7xzz: Cryo-EM structure of the nucleosome in complex with p53
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2022-06-03
Authors: Nishimura, M., Nozawa, K., Takizawa, Y., Kurumizaka, H.
PDB entry 7y00: Cryo-EM structure of the nucleosome containing 169 base-pair DNA with a p53 target sequence
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2022-06-03
Authors: Nishimura, M., Nozawa, K., Takizawa, Y., Kurumizaka, H.
PDB entry 7y01: Crystal structure of ZmMCM10 in complex with 16nt ssDNA at 2.8. Angstrom resolution
Classification: PLANT PROTEIN/DNA
Source organism: Zea mays; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-06-03
Authors: Du, X., Du, J.
PDB entry 7y02: Crystal structure of Ricin A chain bound with (S)-2-(2-amino-4-oxo-3,4-dihydropteridine-7-carboxamido)-3-(4-fluorophenyl)propanoic acid
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7y03: Crystal structure of Ricin A chain bound with (S)-2-(2-amino-4-oxo-3,4-dihydropteridine-7-carboxamido)-2-phenylacetic acid
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7y04: Hsp90-AhR-p23 complex
Classification: CYTOSOLIC PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-06-03
Authors: Wen, Z.L., Zhai, Y.J., Zhu, Y., Sun, F.
PDB entry 7y05: Crystal structure of Ricin A chain bound with (R)-2-(2-amino-4-oxo-3,4-dihydropteridine-7-carboxamido)-2-phenylacetic acid
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7y06: Crystal structure of Ricin A chain bound with (S)-2-(2-amino-4-oxo-3,4-dihydropteridine-7-carboxamido)-4-phenylbutanoic acid
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7y07: Crystal structure of Ricin A chain bound with (S)-2-amino-N-(1-hydroxy-3-phenylpropan-2-yl)-4-oxo-3,4-dihydropteridine-7-carboxamide
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7y08: Crystal structure of Ricin A chain bound with (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-phenylalanine
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-06-03
Authors: Goto, M., Higashi, S., Ohba, T., Kawata, R., Nagatsu, K., Suzuki, S., Saito, R.
PDB entry 7y09: Cryo-EM structure of human IgM-Fc in complex with the J chain and the DBL domain of DBLMSP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2022-06-03
Authors: Shen, H., Ji, C., Xiao, J.
PDB entry 7y0a: Crystal structure of human short-chain acyl-CoA dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.317 Å
Deposited: 2022-06-04
Authors: Huang, Y., Xu, Y., Li, J.
PDB entry 7y0b: Crystal structure of human short-chain acyl-CoA dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.076 Å
Deposited: 2022-06-04
Authors: Huang, Y., Xu, Y., Li, J.
PDB entry 7y0c: Crystal structure of BD55-1403 and SARS-CoV-2 Omicron RBD
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2022-06-04
Authors: Zhang, Z., Xiao, J.
PDB entry 7y0d: Cryo-EM structure of the Mycobacterium smegmatis DNA integrity scanning protein (MsDisA).
Classification: CELL CYCLE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-04
Authors: Gautam, S., Vinothkumar, K.R., Chatterji, D.
PDB entry 7y0e: Crystal structure of TMPRSS2 in complex with Camostat
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2022-06-04
Authors: Wang, H., Duan, Y., Liu, X., Sun, L., Yang, H.
PDB entry 7y0f: Crystal structure of TMPRSS2 in complex with UK-371804
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-06-04
Authors: Wang, H., Duan, Y., Liu, X., Sun, L., Yang, H.
PDB entry 7y0g: Crystal structure of anti-mPEG h15-2b Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-06-05
Authors: Chang, C.Y., Nguyen, T.M.T., Lin, E.C., Su, Y.C.
PDB entry 7y0h: Cryo-EM structure of human IgM-Fc in complex with the J chain and the P. falciparum VAR2CSA FCR3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2022-06-05
Authors: Ji, C., Xiao, J.
PDB entry 7y0i: Solution structures of ASH1L PHD domain in complex with H3K4me2 peptide
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2022-06-05
Authors: Yu, M., Zeng, L.
PDB entry 7y0j: Cryo-EM structure of human IgM-Fc in complex with the J chain and the P. falciparum TM284VAR1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2022-06-05
Authors: Ji, C., Xiao, J.
PDB entry 7y0k: Crystal structure of CpKR in complex with NADPH complex from Candida parapsilosis
Classification: OXIDOREDUCTASE
Source organism: Candida parapsilosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2022-06-05
Authors: Chen, C., Pan, J., Xu, J.H.
PDB entry 7y0l: SulE-S209A
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2022-06-05
Authors: Liu, B., Ran, T., He, J., Wang, W.
PDB entry 7y0n: SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-06-05
Authors: Wang, L.
PDB entry 7y0o: Interface of SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-06-05
Authors: Wang, L.
PDB entry 7y0p: Crystal structure of the P450 BM3 heme domain mutant F87A/T268V/A82T/I263L in complex with N-imidazolyl-hexanoyl-L-phenylalanine, p-cresol and hydroxylamine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2022-06-06
Authors: Jiang, Y., Dong, S., Feng, Y., Cong, Z.
PDB entry 7y0q: Crystal structure of the P450 BM3 heme domain mutant F87A/T268V/A82T/I263L in complex with p-toluidine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2022-06-06
Authors: Jiang, Y., Dong, S., Feng, Y., Cong, Z.
PDB entry 7y0r: Crystal structure of the P450 BM3 heme domain mutant F87L/V78S/A184V in complex with N-imidazolyl-hexanoyl-L-phenylalanine, p-toluidine and hydroxylamine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-06-06
Authors: Jiang, Y., Dong, S., Feng, Y., Cong, Z.
PDB entry 7y0s: Crystal structure of the P450 BM3 heme domain mutant F87A in complex with N-imidazolyl-hexanoyl-L-tyrosyl-L-tyrosine and hydroxylamine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2022-06-06
Authors: Jiang, Y., Dong, S., Feng, Y., Cong, Z.
PDB entry 7y0t: Crystal structure of the P450 BM3 heme domain mutant F87A in complex with N-imidazolyl-hexanoyl-L-phenylalanyl-L-phenylalanine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-06-06
Authors: Jiang, Y., Dong, S., Feng, Y., Cong, Z.
PDB entry 7y0u: Crystal structure of the P450 BM3 heme domain mutant F87A in complex with N-imidazolyl-hexanoyl-L-phenylalanyl-L-phenylalanine and hydroxylamine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-06
Authors: Jiang, Y., Dong, S., Feng, Y., Cong, Z.
PDB entry 7y0v: The co-crystal structure of BA.1-RBD with Fab-5549
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2022-06-06
Authors: Xiao, J.Y., Zhang, Y.
PDB entry 7y0w: Local structure of BD55-5514 and BD55-5840 Fab and Omicron BA.1 RBD complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2022-06-06
Authors: Zhang, Z., Xiao, J.
PDB entry 7y0x: Orf1-glycine complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces luteocolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-06-06
Authors: Wang, Y.L., Li, T.L.
PDB entry 7y0y: Crystal structure of Pseudomonas aeruginosa PvrA (SeMet)
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa PA14
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-06-06
Authors: Liang, H., Zhang, Q., Bartlam, M.
PDB entry 7y0z: Crystal structure of Pseudomonas aeruginosa PvrA
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa PA14
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-06
Authors: Liang, H., Zhang, Q., Bartlam, M.
PDB entry 7y10: Crystal structure of AtSFH5-Sec14 in complex with DPPA
Classification: LIPID TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-06
Authors: Lu, Y.Q., Wang, X.Q., Luo, Z.P., Wu, J.W.
PDB entry 7y11: Crystal structure of AtSFH5-Sec14 in complex with egg PA
Classification: LIPID TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-06-06
Authors: Lu, Y.Q., Wang, X.Q., Luo, Z.P., Wu, J.W.
PDB entry 7y12: Cryo-EM structure of MrgD-Gi complex with beta-alanine
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-06
Authors: Suzuki, S., Iida, M., Kawamoto, A., Oshima, A.
PDB entry 7y13: Cryo-EM structure of apo-state MrgD-Gi complex (local)
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-06
Authors: Suzuki, S., Iida, M., Kawamoto, A., Oshima, A.
PDB entry 7y14: Cryo-EM structure of MrgD-Gi complex with beta-alanine (local)
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-06-06
Authors: Suzuki, S., Iida, M., Kawamoto, A., Oshima, A.
PDB entry 7y15: Cryo-EM structure of apo-state MrgD-Gi complex
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-06-06
Authors: Suzuki, S., Iida, M., Kawamoto, A., Oshima, A.
PDB entry 7y16: Crystal structure of rRNA-processing protein Las1
Classification: RNA BINDING PROTEIN
Source organism: Cyberlindnera jadinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-07
Authors: Chen, J., Liu, L.
PDB entry 7y17: Crystal structure of ribosomal ITS2 pre-rRNA processing complex from Cyberlindnera jadinii
Classification: RNA BINDING PROTEIN
Source organism: Cyberlindnera jadinii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.39 Å
Deposited: 2022-06-07
Authors: Chen, J., Liu, L.
PDB entry 7y18: Crystal structure of ribosomal ITS2 pre-rRNA processing complex from Saccharomyces cerevisiae
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 3.69 Å
Deposited: 2022-06-07
Authors: Chen, J., Liu, L.
PDB entry 7y19: Transcriptional regulator BrpR
Classification: TRANSCRIPTION
Source organism: Vibrio vulnificus CMCP6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2022-06-07
Authors: Ki, N., Ha, N.C., Seung-Ho, H.
PDB entry 7y1a: Lateral hexamer
Classification: PHOTOSYNTHESIS
Source organism: Porphyridium purpureum
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2022-06-07
Authors: You, X., Zhang, X., Cheng, J., Xiao, Y.N., Sun, S., Sui, S.F.
PDB entry 7y1b: 3.2 angstrom cryo-EM structure of extracellular region of mouse Basigin-2 in complex with the Fab fragment of antibody 6E7F1
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2022-06-08
Authors: Zhang, H., Yang, X., Xue, Y., Huang, Y., Mo, X., Zhang, H., Li, N., Gao, N., Li, X., Wang, S., Gao, Y., Liao, J.
PDB entry 7y1c: CryoEM structure of Klebsiella phage Kp9 tail complex applied with C6 symmetry
Classification: VIRUS
Source organism: Klebsiella phage Kp9
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2022-06-08
Authors: Huang, L., Xiang, Y.
PDB entry 7y1f: Cryo-EM structure of human k-opioid receptor-Gi complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-08
Authors: Chen, B.O., Xu, F.E.
PDB entry 7y1g: Crystal structure of human PRKACA complexed with DS01080522
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-08
Authors: Suzuki, M., Ubukata, O., Toyoda, A.
PDB entry 7y1h: Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
Classification: TRANSLATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2022-06-08
Authors: Kim, S., Yoon, I., Son, J., Park, S., Hwang, K.Y.
PDB entry 7y1i: Crystal Structure of TTR-G67R
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2022-06-08
Authors: Luan, X.D., Chen, B.X., Zhang, S.Y.
PDB entry 7y1j: Structure of SUR2A in complex with Mg-ATP and repaglinide in the inward-facing conformation.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-06-08
Authors: Chen, L., Ding, D., Hou, T.
PDB entry 7y1k: Structure of SUR2A in complex with Mg-ATP, Mg-ADP and repaglinide in the inward-facing conformation
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-06-08
Authors: Chen, L., Ding, D., Hou, T.
PDB entry 7y1l: Structure of SUR2B in complex with Mg-ATP and repaglinide in the inward-facing conformation
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2022-06-08
Authors: Chen, L., Ding, D., Hou, T.
PDB entry 7y1m: Structure of SUR2B in complex with Mg-ATP, Mg-ADP, and repaglinide in the inward-facing conformation
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2022-06-08
Authors: Chen, L., Ding, D., Hou, T.
PDB entry 7y1n: Structure of SUR2B in complex with Mg-ATP, Mg-ADP, and repaglinide in the partially occluded state
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2022-06-08
Authors: Chen, L., Ding, D., Hou, T.
PDB entry 7y1p: CRYSTAL STRUCTURE OF THE RGS-HOMOLOGOUS DOMAIN OF AXIN IN COMPLEX WITH LZ-22Na
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.602 Å
Deposited: 2022-06-08
Authors: He, Z., Yuchi, Z.
PDB entry 7y1q: 5.0 angstrom cryo-EM structure of transmembrane regions of mouse Basigin/MCT1 in complex with antibody 6E7F1
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.03 Å
Deposited: 2022-06-08
Authors: Zhang, H., Yang, X., Xue, Y., Huang, Y., Mo, X., Zhang, H., Li, N., Gao, N., Li, X., Wang, S., Gao, Y., Liao, J.
PDB entry 7y1r: Human L-TGF-beta1 in complex with the anchor protein LRRC33
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.01 Å
Deposited: 2022-06-08
Authors: Duan, Z., Zhang, Z.
PDB entry 7y1s: Crystal structure of apo leucyl aminopeptidase from Bacillus amyloliquefaciens
Classification: HYDROLASE
Source organism: Bacillus amyloliquefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.748 Å
Deposited: 2022-06-08
Authors: Huang, P., Jiang, Z.Q.
PDB entry 7y1t: Complex of integrin alphaV/beta8 and L-TGF-beta1 at a ratio of 1:2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2022-06-08
Authors: Duan, Z., Zhang, Z.
PDB entry 7y1u: Crystal structure of isocitrate dehydrogenase from Campylobacter corcagiensis
Classification: OXIDOREDUCTASE
Source organism: Campylobacter corcagiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-06-08
Authors: Bian, M.J., Cheng, Q.P., Wang, P., Zhu, G.P.
PDB entry 7y1w: Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-06-09
Authors: Kim, S., Yoon, I., Son, J., Park, S., Hwang, K.Y.
PDB entry 7y1x: Crystal structure of prolyl oligopeptidase from Microbulbifer arenaceous complex with PEG400 and MES
Classification: HYDROLASE
Source organism: Microbulbifer arenaceous
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2022-06-09
Authors: Huang, P., Jiang, Z.Q.
PDB entry 7y1y: S-ECD (Omicron BA.2) in complex with PD of ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-09
Authors: Li, Y.N., Shen, Y.P., Zhang, Y.Y., Yan, R.H.
PDB entry 7y1z: S-ECD (Omicron BA.3) in complex with three PD of ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-06-09
Authors: Li, Y.N., Shen, Y.P., Zhang, Y.Y., Yan, R.H.
PDB entry 7y20: S-ECD (Omicron BA.3) in complex with two PD of ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-06-09
Authors: Li, Y.N., Shen, Y.P., Zhang, Y.Y., Yan, R.H.
PDB entry 7y21: S-ECD (Omicron BA.5) in complex with PD of ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-06-09
Authors: Li, Y.N., Shen, Y.P., Zhang, Y.Y., Yan, R.H.
PDB entry 7y22: CryoEM structure of Klebsiella phage Kp7 tail complex applied with C6 symmetry
Classification: VIRUS
Source organism: Klebsiella phage Kp7
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-06-09
Authors: Huang, L., Xiang, Y.
PDB entry 7y23: CryoEM structure of Klebsiella phage Kp9 icosahedral head
Classification: VIRUS
Source organism: Klebsiella phage Kp9
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-06-09
Authors: Huang, L., Xiang, Y.
PDB entry 7y24: Cryo-EM structure of the octreotide-bound SSTR2-miniGo-scFv16 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-06-09
Authors: Chen, S., Zheng, S.
PDB entry 7y26: Cryo-EM structure of the octreotide-bound SSTR2-miniGq-scFv16 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-09
Authors: Chen, S., Zheng, S.
PDB entry 7y27: Cryo-EM structure of the SST-14-bound SSTR2-miniGq-scFv16 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2022-06-09
Authors: Chen, S., Zheng, S.
PDB entry 7y28: Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-06-09
Authors: Kim, S., Yoon, I., Son, J., Park, S., Hwang, K.Y.
PDB entry 7y2a: Zn-Carbonic Anhydrase II complexed with 3NPA before UV at 90 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2b: Crystal structure of CUG repeat RNA duplex containing U-U mismatches
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-06-09
Authors: Wang, S.C., Satange, R.B., Hou, M.H.
PDB entry 7y2c: Zn-Carbonic Anhydrase II complexed with 3NPA after UV at 90 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2d: HSA-Cu agent complex
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-09
Authors: Zhang, Z.L., Yang, F.
PDB entry 7y2e: Zn-Carbonic Anhydrase II complexed with 3NPA after UV at 120 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2f: Zn-Carbonic Anhydrase II complexed with 3NPA after UV at 140 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2g: Zn-Carbonic Anhydrase II complexed with 3NPA after UV at 160 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2h: Zn-Carbonic Anhydrase II complexed with 3NPA after UV at 180 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2i: Zn-Carbonic Anhydrase II complexed with 3NPA after UV at 200 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2j: apo-Carbonic Anhydrase II soaked in 3NPA before UV at 90 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2k: apo-Carbonic Anhydrase II soaked in 3NPA after UV at 90 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2l: apo-Carbonic Anhydrase II soaked in 3NPA after UV at 120 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2m: apo-Carbonic Anhydrase II soaked in 3NPA after UV at 140 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2n: apo-Carbonic Anhydrase II soaked in 3NPA after UV at 160 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2o: apo-Carbonic Anhydrase II soaked in 3NPA after UV at 180 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2p: Crystal structure of CUG repeat RNA duplex containing A-U base pair and U-U mismatches
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-06-09
Authors: Wang, S.C., Satange, R.B., Hou, M.H.
PDB entry 7y2q: apo-Carbonic Anhydrase II soaked in 3NPA after UV at 200 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2r: Ni-Carbonic Anhydrase II complexed with 3NPA before UV at 100 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2s: Ni-Carbonic Anhydrase II complexed with 3NPA after UV at 100 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2t: Ni-Carbonic Anhydrase II complexed with 3NPA after UV at 120 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2u: Ni-Carbonic Anhydrase II complexed with 3NPA after UV at 140 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2v: Ni-Carbonic Anhydrase II complexed with 3NPA after UV at 160 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2w: Ni-Carbonic Anhydrase II complexed with 3NPA after UV at 180 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y2x: Ni-Carbonic Anhydrase II complexed with 3NPA after UV at 200 K
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-09
Authors: Kim, C.U., Kim, J.K.
PDB entry 7y35: Cryo-EM structure of the Abaloparatide-bound human PTH1R-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-06-09
Authors: Zhai, X., Mao, C., Shen, Q., Zang, S., Shen, D., Zhang, H., Chen, Z., Wang, G., Zhang, C., Zhang, Y., Liu, Z.
PDB entry 7y36: Cryo-EM structure of the Teriparatide-bound human PTH1R-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-06-10
Authors: Zhai, X., Mao, C., Shen, Q., Zang, S., Shen, D., Zhang, H., Chen, Z., Wang, G., Zhang, C., Zhang, Y., Liu, Z.
PDB entry 7y37: Structure of a triple-helix region of human collagen type V
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-06-10
Authors: Zhu, Y., Yang, X., Sun, F.
PDB entry 7y38: Molecular architecture of the chikungunya virus replication complex
Classification: VIRAL PROTEIN/RNA
Source organism: Chikungunya virus strain S27-African prototype; Onyong-nyong virus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-06-10
Authors: Tan, Y.B., Luo, D.
PDB entry 7y39: Ubiquitin-like domain of human ZFAND1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-06-10
Authors: Lai, C.H., Ko, K.T., Fan, P.J., Yu, T.A., Chang, C.F., Draczkowski, P., Hsu, S.T.D.
PDB entry 7y3a: Crystal structure of TRIM7 bound to 2C
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-06-10
Authors: Dong, C., Yan, X.
PDB entry 7y3b: Crystal structure of TRIM7 bound to GN1
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2022-06-10
Authors: Dong, C., Yan, X.
PDB entry 7y3c: Crystal structure of TRIM7 bound to RACO-1
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2022-06-10
Authors: Dong, C., Yan, X.
PDB entry 7y3e: Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-06-10
Authors: Wang, Y., Zhao, Y., Gao, Y.
PDB entry 7y3f: Structure of the Anabaena PSI-monomer-IsiA supercomplex
Classification: PHOTOSYNTHESIS
Source organism: Nostoc sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2022-06-10
Authors: Nagao, R., Kato, K., Hamaguchi, T., Kawakami, K., Yonekura, K., Shen, J.R.
PDB entry 7y3g: Cryo-EM structure of a class A orphan GPCR
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2022-06-10
Authors: Liu, Z.J., Hua, T., Li, H., Zhang, J.Y., Luo, F.
PDB entry 7y3h: Crystal Structure of Diels-Alderase ApiI in complex with SAM and product
Classification: BIOSYNTHETIC PROTEIN
Source organism: Apiospora montagnei NRRL 25634
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-06-10
Authors: Zhou, J.H., Lu, J.Y.
PDB entry 7y3i: Structure of DNA bound SALL4
Classification: DNA/DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-06-10
Authors: Ru, W., Xu, C.
PDB entry 7y3j: 24B3 antibody-peptide complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-06-11
Authors: Irie, K., Irie, Y., Kita, A., Miki, K.
PDB entry 7y3k: Structure of SALL4 ZFC4 bound with 16 bp AT-rich dsDNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2022-06-11
Authors: Ru, W., Xu, C.
PDB entry 7y3l: Structure of SALL3 ZFC4 bound with 12 bp AT-rich dsDNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-06-11
Authors: Ru, W., Xu, C.
PDB entry 7y3m: Structure of SALL4 ZFC1 bound with 16 bp AT-rich dsDNA
Classification: DNA/DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.723 Å
Deposited: 2022-06-11
Authors: Ru, W., Xu, C.
PDB entry 7y3n: Crystal structure of SARS-CoV receptor binding domain in complex with human antibody BIOLS56
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2022-06-11
Authors: Rao, X., Chai, Y., Wu, Y., Gao, F.
PDB entry 7y3o: Crystal structure of SARS-CoV-2 receptor binding domain in complex with human antibody BIOLS56
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-11
Authors: Rao, X., Gao, F., Wu, Y., Gao, F.
PDB entry 7y3p: Salmonella typhimurium YbiB protein
Classification: DNA BINDING PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. 14028s Wu
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2022-06-12
Authors: Zhai, L., Li, B.Q., Jia, H.H.
PDB entry 7y3s: Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
Classification: TRANSLATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-06-12
Authors: Kim, S., Yoon, I., Son, J., Park, S., Hwang, K.Y.
PDB entry 7y3t: CryoEM structure of Klebsiella phage Kp7 icosahedral head
Classification: VIRUS
Source organism: Klebsiella phage Kp7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-06-12
Authors: Huang, L., Xiang, Y.
PDB entry 7y3u: Crystal structure of the complex of Lactoperoxidase with Nitric oxide at 2.50A resolution
Classification: OXIDOREDUCTASE
Source organism: Bos grunniens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-06-13
Authors: Singh, P.K., Viswanathan, V., Ahmad, N., Rani, C., Sharma, P., Sharma, S., Singh, T.P.
PDB entry 7y3v: Crystal structure of CdpNPT in complex with harmane
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2022-06-13
Authors: Nakashima, Y., Morita, H.
PDB entry 7y3w: Crystal structure of an questin oxidase (BTG13) from Cercospora sp. JNU001
Classification: OXIDOREDUCTASE
Source organism: Cercospora sojina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-13
Authors: Hou, X.D., Fu, K., Rao, Y.J.
PDB entry 7y3x: Crystal structure of BTG13 mutant (H58F)
Classification: OXIDOREDUCTASE
Source organism: Cercospora sojina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-06-13
Authors: Hou, X.D., Rao, Y.J.
PDB entry 7y3y: Crystal structure of BTG13 mutant (T299V)
Classification: OXIDOREDUCTASE
Source organism: Cercospora sojina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2022-06-13
Authors: Hou, X.D., Fu, K., Rao, Y.J.
PDB entry 7y3z: Structure of a novel carboxylesterase FEH from Acinetobacter sp. DL-2
Classification: HYDROLASE
Source organism: Acinetobacter
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-13
Authors: Huang, Y., Liu, W.D., Zhang, Y.J., Duan, Y.J., Lu, M.L.
PDB entry 7y40: Crystal structure of a bright green fluorescent protein (StayGold) in jellyfish Cytaeis uchidae from Biortus
Classification: FLUORESCENT PROTEIN
Source organism: Cytaeis uchidae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-06-13
Authors: Wu, J., Wang, F., Gui, W., Cheng, W., Yang, Y.
PDB entry 7y41: Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth
Classification: RIBOSOME
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-06-13
Authors: Sengupta, J., Baid, P.
PDB entry 7y42: Cryo-EM structure of the SARS-CoV-2 spike glycoprotein in complex with all-trans retinoic acid
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2022-06-13
Authors: Xiang, Y., Wang, L.
PDB entry 7y43: Crystal structure of the KAT6A WH domain and its bound double stranded DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-13
Authors: Wang, Z., Jia, Y.
PDB entry 7y44: Re-refinement of damage free X-ray structure of bovine cytochrome c oxidase at 1.9 angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-14
Authors: Tsukihara, T., Hirata, K., Ago, H.
PDB entry 7y45: Cryo-EM structure of the Na+,K+-ATPase in the E2.2K+ state
Classification: MEMBRANE PROTEIN
Source organism: Squalus acanthias
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-14
Authors: Kanai, R., Cornelius, F., Vilsen, B., Toyoshima, C.
PDB entry 7y46: Cryo-EM structure of the Na+,K+-ATPase in the E2.2K+ state after addition of ATP
Classification: MEMBRANE PROTEIN
Source organism: Squalus acanthias
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.2 Å
Deposited: 2022-06-14
Authors: Kanai, R., Cornelius, F., Vilsen, B., Toyoshima, C.
PDB entry 7y47: Crystal structure of bifunctional miltiradiene synthase from selaginella moellendorffii that complexed with GGPP
Classification: PLANT PROTEIN
Source organism: Selaginella moellendorffii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-06-14
Authors: Ma, X., Tao, Y., Jiang, T.
PDB entry 7y48: Cryo-EM Structure of biliverdin-bound mitochondrial ABC transporter ABCB10 from Biortus
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2022-06-14
Authors: Cao, S., Yang, Y.
PDB entry 7y49: Cryo-EM Structure of apo mitochondrial ABC transporter ABCB10 from Biortus
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2022-06-14
Authors: Cao, S., Yang, Y.