LiteFold/PDB huggingface dataset:
PDB entry 9h5t: ATP-bound human mitochondrial Hsp60-Hsp10 half football complex (C1)
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-10-23
Authors: Lopez-Alonso, J.P., Tascon, I., Ubarretxena-Belandia, I.
PDB entry 9h5u: ATP-bound human mitochondrial Hsp60 double-ring complex (C1)
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-10-23
Authors: Lopez-Alonso, J.P., Tascon, I., Ubarretxena-Belandia, I.
PDB entry 9h5v: Apo human mitochondrial Hsp60 (C1)
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2024-10-23
Authors: Lopez-Alonso, J.P., Tascon, I., Ubarretxena-Belandia, I.
PDB entry 9h5w: X-ray structure of Hydrogenosomal processing peptidase (HPP), E56Q inactive mutant, from Trichomonas vaginalis co-crystallized with presequence peptide from adenylate kinase (AK) - not visible in the structure model
Classification: HYDROLASE
Source organism: Trichomonas vaginalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-10-23
Authors: Samad, A., Motlova, L., Cianci, M., Barinka, C.
PDB entry 9h5x: Crystal structure of human V122I transthyretin in complex with (3,4-dihydroxy-5-nitrophenyl)-(3-fluoro-5-hydroxyphenyl)methanone compound
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-10-23
Authors: Varejao, N., Pinheiro, F., Pallares, I., Ventura, S., Reverter, D.
PDB entry 9h5y: Crystal structure of human V30M transthyretin in complex with (3,4-dihydroxy-5-nitrophenyl)-(3-fluoro-5-hydroxyphenyl)methanone compound
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-10-23
Authors: Varejao, N., Pinheiro, F., Pallares, I., Ventura, S., Reverter, D.
PDB entry 9h5z: Crystal structure of Thermoanaerobacterales bacterium monoamine oxidase in complex with benzylamine
Classification: FLAVOPROTEIN
Source organism: Thermoanaerobacterales bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-23
Authors: Basile, L., Poli, C., Santema, L.L., Lesenciuc, R.C., Fraaije, M.W., Binda, C.
PDB entry 9h61: Auxin transporter-like protein 3 (LAX3) in the inward occluded state in complex with auxin (Indole-3-acetic acid, IAA)
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-10-23
Authors: Ung, K.L., Andersen, C.G., Stokes, D.L., Pedersen, B.P.
PDB entry 9h62: Auxin transporter-like protein 3 (LAX3) in the inward occluded state in complex with 2,4-Dichlorophenoxyacetic acid (2,4-D)
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2024-10-23
Authors: Ung, K.L., Amsinck, B.L., Andersen, C.G., Stokes, D.L., Pedersen, B.P.
PDB entry 9h63: Auxin transporter-like protein 3 (LAX3) in the fully occluded state in complex with 2-naphthoxyacetic acid (2-NOA)
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-10-23
Authors: Ung, K.L., Andersen, C.G., Stokes, D.L., Pedersen, B.P.
PDB entry 9h64: Crystal structure of Thermoanaerobacterales bacterium monoamine oxidase in complex with n-heptylamine
Classification: FLAVOPROTEIN
Source organism: Thermoanaerobacterales bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-10-23
Authors: Basile, L., Poli, C., Santema, L.L., Lesenciuc, R.C., Fraaije, M.W., Binda, C.
PDB entry 9h65: Steroidal Selective Modulators of FXR with Therapeutic Potential
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-10-23
Authors: Kydd-Sinclair, D., Watson, K.A.
PDB entry 9h66: Steroidal Selective Modulators of FXR with Therapeutic Potential
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-10-23
Authors: Kydd-Sinclair, D., Watson, K.A.
PDB entry 9h68: Crystal Structure of the spore gernation lytic transglycosylase SleC from Clostridioides difficile in its zymogenic form (prepro-SleC)
Classification: HYDROLASE
Source organism: Clostridioides difficile 630
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-10-23
Authors: Molina, R., Garay-Alvarez, A., Hermoso, J.A.
PDB entry 9h6a: Crystal structure of the E. coli F-plasmid VapBC toxin-antitoxin complex
Classification: TOXIN
Source organism: Escherichia coli KLY
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2024-10-24
Authors: Hollingshead, S., McVicker, G., Nielsen, M.R., Zhang, Y., Pilla, G., Jones, R.A., Thomas, J.C., Johansen, S.E.H., Exley, R.M., Brodersen, D.E., Tang, C.M.
PDB entry 9h6b: Crystal structure of the E. coli F-plasmid VapBC toxin-antitoxin complex (VapB T3N, A13P, L16R)
Classification: TOXIN
Source organism: Escherichia coli KLY
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-10-24
Authors: Hollingshead, S., McVicker, G., Nielsen, M.R., Zhang, Y., Pilla, G., Jones, R.A., Thomas, J.C., Johansen, S.E.H., Exley, R.M., Brodersen, D.E., Tang, C.M.
PDB entry 9h6c: Crystal structure of the E. coli F-plasmid VapBC toxin-antitoxin complex (VapB T3N)
Classification: TOXIN
Source organism: Escherichia coli KLY
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-10-24
Authors: Hollingshead, S., McVicker, G., Nielsen, M.R., Zhang, Y., Pilla, G., Jones, R.A., Thomas, J.C., Johansen, S.E.H., Exley, R.M., Brodersen, D.E., Tang, C.M.
PDB entry 9h6d: Crystal structure of the E. coli F-plasmid VapBC toxin-antitoxin complex (VapB V5E)
Classification: TOXIN
Source organism: Escherichia coli KLY
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2024-10-24
Authors: Hollingshead, S., McVicker, G., Nielsen, M.R., Zhang, Y., Pilla, G., Jones, R.A., Thomas, J.C., Johansen, S.E.H., Exley, R.M., Brodersen, D.E., Tang, C.M.
PDB entry 9h6e: Complex of Histidine-containing phosphotransfer 1 (AHP1) and Response regulator 1 (ARR1) from A. thaliana
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2024-10-24
Authors: Tran, L.H., Ruszkowski, M.
PDB entry 9h6f: Bacteroides ovatus GH98 endoxylanase in complex with arabino-xylooligosaccharide
Classification: HYDROLASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-24
Authors: Tomlinson, C.W.E., Cartmell, A., Bolam, D.
PDB entry 9h6g: Inactive Bacteroides ovatus GH98 endoxylanase E361A in complex with arabino-xylooligosaccharide
Classification: HYDROLASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-10-24
Authors: Tomlinson, C.W.E., Cartmell, A., Bolam, D.N.
PDB entry 9h6h: Bacteroides ovatus GH98 endoxylanase with Seleno-methionine substituents
Classification: HYDROLASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-10-24
Authors: Tomlinson, C.W.E., Cartmell, A., Bolam, D.N.
PDB entry 9h6i: Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
Classification: RIBOSOME
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-10-24
Authors: Faille, A., Warren, A.J.
PDB entry 9h6j: Human B4GALNT1 Apo Structure
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2024-10-24
Authors: Welland, J.W.J., Deane, J.E.
PDB entry 9h6k: Human B4GALNT1 in Complex with UDP-GalNac
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-10-24
Authors: Welland, J.W.J., Deane, J.E.
PDB entry 9h6l: Human B4GALNT1 in Complex with UDP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.674 Å
Deposited: 2024-10-24
Authors: Welland, J.W.J., Deane, J.E.
PDB entry 9h6m: Flavin-dependent tryptophan 7-halogenase RebH in complex with 6-bromo-L-tryptophan
Classification: FLAVOPROTEIN
Source organism: Lentzea aerocolonigenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-10-24
Authors: Bork, S., Niemann, H.H.
PDB entry 9h6n: Flavin-dependent tryptophan 6-halogenase Thal in complex with 6-bromo-L-tryptophan
Classification: FLAVOPROTEIN
Source organism: Streptomyces albogriseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2024-10-24
Authors: Bork, S., Niemann, H.H.
PDB entry 9h6p: Crystal structure of NUDT14 complexed with novel compound AMNUDT14-003 in spacegroup P1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.162 Å
Deposited: 2024-10-24
Authors: Balikci, E., Koekemoer, L., Dlamini, L.S., Gurav, N., Apostolidou, M., Adcock, C., McGown, A., Marques, A.M.C., Spencer, J., Huber, K.V.M., Structural Genomics Consortium (SGC)
PDB entry 9h6r: X-ray structure of Hydrogenosomal processing peptidase (HPP), E56Q inactive mutant, from Trichomonas vaginalis co-crystallized with presequence peptide from ferredoxin oxidoreductase (PFO) - not visible in the structure model
Classification: HYDROLASE
Source organism: Trichomonas vaginalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-10-25
Authors: Samad, A., Barinka, C., Motlova, L., Cianci, M.
PDB entry 9h6t: Partial Cas1-Cas2 CRISPR integrase complex bound to a half-integration product, Streptococcus thermophilus DGCC 7710 CRISPR3 system
Classification: DNA BINDING PROTEIN
Source organism: Streptococcus thermophilus DGCC 7710; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-10-25
Authors: Sasnauskas, G., Gaizauskaite, U., Tamulaitiene, G.
PDB entry 9h6u: SARS-CoV-2 S protein in complex with pT1679 Fab
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2024-10-25
Authors: Hansen, G., Benecke, T., Vollmer, B., Gruenewald, K., Krey, T.
PDB entry 9h6v: Lotus japonicus CERK6 extracellular domain in complex with two nanobodies
Classification: PLANT PROTEIN
Source organism: Lama glama; Lotus japonicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-10-25
Authors: Gysel, K., Alsarraf, H.M.A.B., Hansen, S.B., Andersen, K.R.
PDB entry 9h6w: Crystal structure of the Salmonella effector SspH1
Classification: LIGASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-10-25
Authors: Kennedy, C.R., Esposito, D., House, D., Rittinger, K.
PDB entry 9h6x: Cryo-EM structure of lipid-bound human myoferlin (25 mol% DOPS/5 mol% PI(4,5)P2 nanodisc)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2024-10-25
Authors: Cretu, C., Moser, T., Preobraschenski, J.
PDB entry 9h6y: Late-stage 48S Initiation Complex (LS48S IC) guided by the trans-RNA
Classification: TRANSLATION
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-25
Authors: Nguyen, T.T., Hashem, Y., Rocha, R.E.O., Boissier, F., Qian, S.B., Jia, L., Uematsu, S., Gu, Y., Shi, S.
PDB entry 9h70: Crystal structure of LMTP1
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2024-10-25
Authors: Siponen, M.I., Vidal Meireles, A., Malesinski, S., Johnson, X.
PDB entry 9h71: KIT123-KITbp complex (Domains D1-3 of the human receptor tyrosine kinase KIT complexed with the de novo designed minibinder KITbp)
Classification: PROTEIN BINDING
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-10-25
Authors: Toul, M., Verschueren, K.H.G., Verstraete, K., Savvides, S.N.
PDB entry 9h72: Csn2 (point mutations Y212R, I213R and M215R) in complex with Cas1-Cas2 integrase and dsDNA, Streptococcus thermophilus DGCC 7710 CRISPR3 system
Classification: DNA BINDING PROTEIN
Source organism: Streptococcus thermophilus DGCC 7710; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2024-10-25
Authors: Sasnauskas, G., Gaizauskaite, U., Tamulaitiene, G.
PDB entry 9h73: Cryo-EM structure of an octameric G10-resistosome from wheat in 'back-to-back' arrangement
Classification: PLANT PROTEIN
Source organism: Triticum aestivum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-10-25
Authors: Guo, G.H., Zhao, H., Lukoyanova, N., Selvaraj, M., Jones, J.
PDB entry 9h74: Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA
Classification: TRANSLATION
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-25
Authors: Nguyen, T.T., Hashem, Y., Rocha, R.E.O., Boissier, F., Qian, S.B., Jia, L., Uematsu, S., Gu, Y., Shi, S.
PDB entry 9h75: NMR solution structure of the GEFH1 C1 domain
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-10-26
Authors: Choi, S.R., Gossert, A.D., Steinmetz, M.O.
PDB entry 9h76: Bacterial LAT transporter BASC in complex with L-Ala and NB53
Classification: MEMBRANE PROTEIN
Source organism: Carnobacterium sp. AT7; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-26
Authors: Fort, J., Palacin, M.
PDB entry 9h77: MPP8 chromodomain in complex with nanobody 3A02
Classification: GENE REGULATION
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2024-10-26
Authors: Richards, M.W., Bayliss, R.
PDB entry 9h78: [FeS] cluster-loaded SMS complex from M. jannaschii
Classification: METAL BINDING PROTEIN
Source organism: Methanocaldococcus jannaschii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-10-27
Authors: Martinez-Carranza, M., Sauguet, L.
PDB entry 9h79: Crystal structure of Thrombin in complex with a Chlorothiophene-based inhibitor, CP2, discovered by a novel rapid nanoscale library screening.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-10-27
Authors: Chinellato, M., Zsolt, B., Angelini, A., Heinis, C., Cendron, L.
PDB entry 9h7a: Human Transthyretin in Complex with 3,5-Dichlorobenzenesulfonamide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7b: Human Transthyretin in Complex with Biphenyl-4-carboxylic Acid
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7c: Human Transthyretin in Complex with 4-(1H-imidazol-1-yl)phenol
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7d: Human Transthyretin in Complex with 2-(phenylamino)benzoic acid
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7e: Human Transthyretin in Complex with 4-pyridin-3-ylbenzoic acid
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7f: Human Transthyretin in Complex with 3,5-dichloroaniline
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7g: Human Transthyretin in Complex with 1H-indole-3-carbonitrile
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7h: Human Transthyretin in Complex with Isoquinolin-3-amine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7i: Human Transthyretin in Complex with 4-(1H-pyrazol-4-yl)quinoline
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7j: Human Transthyretin in Complex with 5-methyl-4-phenyl-1H-pyrazol-3-amine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7k: Human Transthyretin in Complex with 8-(3,5-dimethyl-1H-pyrazol-4-yl)quinoline
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7l: Human Transthyretin in Complex with 4-phenyl-1H-pyrazolo[3,4-b]pyridin-3-amine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7m: Human Transthyretin in Complex with 4-(quinolin-8-yl)-1H-pyrazolo[3,4-d]pyrimidin-6-amine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7n: Human Transthyretin in Complex with 4-(5-methyl-1H-1,2,4-triazol-3-yl)quinoline
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7o: Human Transthyretin in Complex with 5-(quinolin-8-yl)pyrimidin-2-amine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7p: Human Transthyretin S52P Mutant in Complex with 4-(1H-pyrazol-4-yl)quinoline
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2024-10-27
Authors: Chen, W.
PDB entry 9h7q: MITF in complex with 5-chloro-3-phenyl-1H-indole-2-carboxylic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-10-28
Authors: Renatus, M., Wirth, E., Gutmann, S.
PDB entry 9h7r: MITF in complex with 6-((1-hydroxycyclohexyl)ethynyl)-1-phenyl-1H-indole-2-carboxylic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2024-10-28
Authors: Renatus, M., Wirth, E., Gutmann, S.
PDB entry 9h7s: MITF in complex with 1-(3-chlorophenyl)-6-((1-hydroxycyclohexyl)ethynyl)-1H-indole-2-carboxylic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-10-28
Authors: Renatus, M., Wirth, E., Gutmann, S.
PDB entry 9h7t: MITF in complex with 6-((1-hydroxycyclohexyl)ethynyl)-4-methyl-1-phenyl-1H-indole-2-carboxylic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-10-28
Authors: Renatus, M., Wirth, E., Gutmann, S.
PDB entry 9h7v: The baseplate assembly of Haloferax tailed virus 1.
Classification: VIRUS
Source organism: Haloferax tailed virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-10-28
Authors: Zhang, D., Daum, B., Isupov, M.N., McLaren, M.
PDB entry 9h7w: Hen Egg White Lysozyme in Complex with Imidizole
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2024-10-28
Authors: Bauer, J.A., Bauerova, V.
PDB entry 9h7x: SmsC2 dimer from M. jannaschii
Classification: METAL TRANSPORT
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.525 Å
Deposited: 2024-10-28
Authors: Mechaly, A.E., Dussouchaud, M., Haouz, A., Betton, J.M., Barras, F.
PDB entry 9h7y: SmsC2B2 complex from M. jannaschii (orthorhombic form)
Classification: METAL TRANSPORT
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.198 Å
Deposited: 2024-10-28
Authors: Mechaly, A.E., Dussouchaud, M., Haouz, A., Betton, J.M., Barras, F.
PDB entry 9h7z: Aspergillus niger Glucose Oxidase bound to Ba2+ ions
Classification: OXIDOREDUCTASE
Source organism: Aspergillus niger
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2024-10-28
Authors: Bauer, J.A., Bauerova, V.
PDB entry 9h80: Structure of the outer membrane exopolysaccharide transporter PelBC
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-10-28
Authors: Benedens, M., Rosales, C., Beckmann, R., Kedrov, A.
PDB entry 9h81: human carbonic anhydrase I in complex with Sonepiprazole
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-10-28
Authors: Angeli, A., Ferraroni, M.
PDB entry 9h82: Small circular RNA dimer - Class 1
Classification: RNA
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.29 Å
Deposited: 2024-10-28
Authors: McRae, E.K., Kristoffersen, E.L., Holliger, P., Andersen, E.S.
PDB entry 9h83: Small circular RNA dimer - Class 2
Classification: RNA
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.8 Å
Deposited: 2024-10-28
Authors: McRae, E.K., Kristoffersen, E.L., Holliger, P., Andersen, E.S.
PDB entry 9h84: BAM-hinge (LVPR)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-10-28
Authors: Machin, J.M., Ranson, N.A.
PDB entry 9h85: BAM-hinge (GSGS)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-10-28
Authors: Machin, J.M., Ranson, N.A.
PDB entry 9h86: Small circular RNA dimer - Class 4
Classification: RNA
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2024-10-28
Authors: McRae, E.K., Kristoffersen, E.L., Holliger, P., Andersen, E.S.
PDB entry 9h87: Crystal structure of LmrR variant V15aY with Val15 replaced by 3-aminotyrosine
Classification: DNA BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-10-28
Authors: Thunnissen, A.M.W.H., Brouwer, B., Roelfes, G.
PDB entry 9h88: Crystal structure of LmrR variant V15aY-RNYW with Val15 replaced by 3-aminotyrosine and evolved as Friedel-Crafts alkylase
Classification: DNA BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-10-28
Authors: Thunnissen, A.M.W.H., Brouwer, B., Roelfes, G.
PDB entry 9h89: BAM-hinge (LVPR) suppressor (T434A)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-10-28
Authors: Machin, J.M., Ranson, N.A.
PDB entry 9h8a: Small circular RNA dimer - Class 5
Classification: RNA
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.6 Å
Deposited: 2024-10-28
Authors: McRae, E.K., Kristoffersen, E.L., Holliger, P., Andersen, E.S.
PDB entry 9h8b: Ex vivo cannulae fiber structure of Pyrodictium abyssi
Classification: PROTEIN FIBRIL
Source organism: Pyrodictium abyssi DSM 6158
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-10-28
Authors: Sleutel, M., Remaut, H.
PDB entry 9h8c: Human CDK8/Cyclin-C complex with inhibitor 2-9
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.573 Å
Deposited: 2024-10-29
Authors: Somers, D.O.
PDB entry 9h8d: Crystal structure of HPK1 T165E/S171E in complex with compound 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.641 Å
Deposited: 2024-10-29
Authors: Schimpl, M., Pflug, A.
PDB entry 9h8e: Crystal structure of HPK1 T165E/S171E in complex with compound 13
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.631 Å
Deposited: 2024-10-29
Authors: Schimpl, M., Pflug, A.
PDB entry 9h8f: Crystal structure of HPK1 T165E/S171E in complex with pyrazine carboxamide inhibitor AZ3246 (compound 24)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.393 Å
Deposited: 2024-10-29
Authors: Schimpl, M., Pflug, A.
PDB entry 9h8g: Complex 5 30S-GE81112
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.09 Å
Deposited: 2024-10-29
Authors: Schedlbauer, A., Han, X., van Bakel, W., Kaminishi, T., Ochoa-Lizarralde, B., Iturrioz, I., Capuni, R., Parry, R., Zegarra, R., Gil-Carton, D., Lopez-Alonso, J.P., Barragan Sanz, K., Brandi, L., Gualerzi, C.O., Fucini, P., Connell, S.R.
PDB entry 9h8h: Structure of DC11 anti tau antibody Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Mus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.331 Å
Deposited: 2024-10-29
Authors: Cehlar, O., Njemoga, S.
PDB entry 9h8i: Crystallization of B. licheniformis levanase
Classification: STRUCTURAL PROTEIN
Source organism: Bacillus licheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-10-29
Authors: Carr, S., Cruz-Migoni, A., Porras-Dominguez, J.R., Van den Ende, W., Lopez-Munguia Canales, A.
PDB entry 9h8j: Crystal Structure of Polyphosphate kinase 2-II (PPK2-II) from Lysinibacillus fusiformis in apo form
Classification: TRANSFERASE
Source organism: Lysinibacillus fusiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-29
Authors: Friedrich, F., Kuge, M., Keppler, M., Gerhardt, S., Einsle, O., Andexer, J.N.
PDB entry 9h8k: Crystal Structure of Polyphosphate kinase 2-II (PPK2-II) from Lysinibacillus fusiformis bound to AMP
Classification: TRANSFERASE
Source organism: Lysinibacillus fusiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-10-29
Authors: Friedrich, F., Kuge, M., Keppler, M., Gerhardt, S., Einsle, O., Andexer, J.N.
PDB entry 9h8l: Crystal Structure of Polyphosphate kinase 2-II (PPK2-II) from Lysinibacillus fusiformis bound to TMP
Classification: TRANSFERASE
Source organism: Lysinibacillus fusiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-10-29
Authors: Friedrich, F., Kuge, M., Keppler, M., Gerhardt, S., Einsle, O., Andexer, J.N.
PDB entry 9h8m: FAD-dependent monooxygenase sorC
Classification: OXIDOREDUCTASE
Source organism: Penicillium rubens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2024-10-29
Authors: Tjallinks, G., Mattevi, A.
PDB entry 9h8p: Eugenol Oxidase (EUGO) from Rhodococcus jostii RHA1, mutant DTT
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii RHA1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-10-29
Authors: Rozeboom, H.J., Fraaije, M.W.
PDB entry 9h8q: Eugenol Oxidase (EUGO) from Rhodococcus jostii RHA1, mutant DTT-T425G
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii RHA1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-10-29
Authors: Rozeboom, H.J., Fraaije, M.W.
PDB entry 9h8r: Crystal structure of Nkp46 in complex with a bicyclic peptide BCY00016132
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-10-29
Authors: Pellegrino, S., Carr, K., Bezerra, G.A.
PDB entry 9h8s: Human CDK8/Cyclin-C complex with inhibitor 3-7
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.157 Å
Deposited: 2024-10-29
Authors: Somers, D.O.
PDB entry 9h8t: Cryo-EM structure of the atovaquone-inhibited Complex III from the Chlorocebus sabaeus respirasome
Classification: ELECTRON TRANSPORT
Source organism: Chlorocebus sabaeus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2024-10-29
Authors: Maclean, A., Muhleip, A.
PDB entry 9h8u: FAD-dependent oxidase sorD with sorbicillin bound
Classification: OXIDOREDUCTASE
Source organism: Penicillium rubens Wisconsin 54-1255
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-10-29
Authors: Tjallinks, G., Mattevi, A.
PDB entry 9h8v: The Cryo-EM structure of bacterial beta-1,3-glucan phosphorylase from family GH161
Classification: SUGAR BINDING PROTEIN
Source organism: gut metagenome
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2024-10-29
Authors: Cioci, G., Cooper, N., Ladeveze, S., Shayan, R.
PDB entry 9h8z: FAD-dependent monooxygenase sorC with sorbicillin bound
Classification: OXIDOREDUCTASE
Source organism: Penicillium rubens Wisconsin 54-1255
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2024-10-29
Authors: Tjallinks, G., Mattevi, A.
PDB entry 9h90: Cryo-EM structure of the Vibrio natrigens 30S ribosomal subunit in complex with spectinomycin.
Classification: RIBOSOME
Source organism: Vibrio natriegens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-10-29
Authors: Raulf, K.F., Koller, T.O., Beckert, B., Morici, M., Lepak, A., Bange, G., Wilson, D.N.
PDB entry 9h91: Cryo-EM structure of the Vibrio natrigens 50S ribosomal subunit in complex with the proline-rich antimicrobial peptide Bac5(1-17).
Classification: RIBOSOME
Source organism: Vibrio natriegens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-10-29
Authors: Raulf, K.F., Koller, T.O., Beckert, B., Morici, M., Lepak, A., Bange, G., Wilson, D.N.
PDB entry 9h92: FAD-dependent oxidase sorD
Classification: OXIDOREDUCTASE
Source organism: Penicillium rubens Wisconsin 54-1255
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-10-29
Authors: Tjallinks, G., Mattevi, A.
PDB entry 9h93: Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from a yeast expression system.
Classification: VIRUS LIKE PARTICLE
Source organism: Poliovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-10-29
Authors: Bahar, M.W., Sherry, L., Stonehouse, N.J., Rowlands, D.J., Fry, E.E., Stuart, D.I.
PDB entry 9h94: Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC5a) from a yeast expression system.
Classification: VIRUS LIKE PARTICLE
Source organism: Poliovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-10-29
Authors: Bahar, M.W., Sherry, L., Stonehouse, N.J., Rowlands, D.J., Fry, E.E., Stuart, D.I.
PDB entry 9h95: YnaI in closed conformation purified in DDM with additional lipids showing ligand-filled pockets
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-10-29
Authors: Flegler, V.J., Bottcher, B., Rasmussen, T., Rasmussen, A., Hedrich, R.
PDB entry 9h96: STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA'; CSNK2A2 GENE PRODUCT) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR MC11
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2024-10-30
Authors: Niefind, K., Lindenblatt, D., Werner, C.
PDB entry 9h97: Structure of protein kinase CK2 catalytic subunit CK2alpha (CSNK2A1 gene product) in complex with the indenoindole-type inhibitor MC11 at high-salt conditions
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-10-30
Authors: Niefind, K., Lindenblatt, D., Werner, C.
PDB entry 9h99: Native structure of the full-length pesticidal protein Cry1Ca18 at pH7, from crystals formed in vivo
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-10-30
Authors: Best, H.L., Williamson, L.J., Rizkallah, P.J., Galchenkova, M., Oberthur, D., Crickmore, N., Berry, C.
PDB entry 9h9a: native structure of the full-length pesticidal protein Cry8Ba2, from crystals formed in vivo (form 1)
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2024-10-30
Authors: Williamson, L.J., Best, H.L., Galchenkova, M., Rizkallah, P.J., Oberthur, D., Berry, C.
PDB entry 9h9b: native structure of the full-length pesticidal protein Cry8Ba2, from crystals formed in vivo (form 2)
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2024-10-30
Authors: Williamson, L.J., Best, H.L., Oberthur, D., Rizkallah, P.J., Berry, C.
PDB entry 9h9c: Crystal structure of thioredoxin reductase from Cryptosporidium parvum in the ""activated in"" conformation
Classification: FLAVOPROTEIN
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-10-30
Authors: Gabriele, F., Palerma, M., Ardini, M., Bogard, J., Chen, X.M., Williams, D.L., Angelucci, F.
PDB entry 9h9d: Protein kinase CK2 catalytic subunit alpha (CSNK2A1 gene product) in complex the the indenoindole-type inhibitor MC11
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-10-30
Authors: Niefind, K., Lindenblatt, D., Werner, C.
PDB entry 9h9e: Cryo-EM structure of the human GABAA receptor alpha1 subunit in complex with the assembly factor NACHO/TMEM35A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-10-30
Authors: Hooda, Y., Sente, A., Judy, R.M., Smalinskaite, L., Peak-Chew, S., Naydenova, K., Malinauskas, T., Hardwick, S.W., Chirgadze, D.Y., Aricescu, A.R., Hegde, R.S.
PDB entry 9h9h: Complex 1 30S-IF1-IF2-IF3-GE81112
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-10-31
Authors: Schedlbauer, A., Han, X., van Bakel, W., Kaminishi, T., Ochoa-Lizarralde, B., Iturrioz, I., Capuni, R., Parry, R., Zegarra, R., Gil-Carton, D., Lopez-Alonso, J.P., Barragan Sanz, K., Brandi, L., Gualerzi, C.O., Fucini, P., Connell, S.R.
PDB entry 9h9i: Complex 2 (HEAD) 30S-IF1-IF3-tRNA-GE81112
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-10-31
Authors: Schedlbauer, A., Han, X., van Bakel, W., Kaminishi, T., Ochoa-Lizarralde, B., Iturrioz, I., Capuni, R., Parry, R., Zegarra, R., Gil-Carton, D., Lopez-Alonso, J.P., Barragan Sanz, K., Brandi, L., Gualerzi, C.O., Fucini, P., Connell, S.R.
PDB entry 9h9j: Complex 2 (BODY) 30S-IF1-IF3-tRNA-GE81112
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-10-31
Authors: Schedlbauer, A., Han, X., van Bakel, W., Kaminishi, T., Ochoa-Lizarralde, B., Iturrioz, I., Capuni, R., Parry, R., Zegarra, R., Gil-Carton, D., Lopez-Alonso, J.P., Barragan Sanz, K., Brandi, L., Gualerzi, C.O., Fucini, P., Connell, S.R.
PDB entry 9h9k: Complex 3 (HEAD) 30S-tRNA-GE81112
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-10-31
Authors: Schedlbauer, A., Han, X., van Bakel, W., Kaminishi, T., Ochoa-Lizarralde, B., Iturrioz, I., Capuni, R., Parry, R., Zegarra, R., Gil-Carton, D., Lopez-Alonso, J.P., Barragan Sanz, K., Brandi, L., Gualerzi, C.O., Fucini, P., Connell, S.R.
PDB entry 9h9l: Complex 3 (BODY) 30S-tRNA-GE81112
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-10-31
Authors: Schedlbauer, A., Han, X., van Bakel, W., Kaminishi, T., Ochoa-Lizarralde, B., Iturrioz, I., Capuni, R., Parry, R., Zegarra, R., Gil-Carton, D., Lopez-Alonso, J.P., Barragan Sanz, K., Brandi, L., Gualerzi, C.O., Fucini, P., Connell, S.R.
PDB entry 9h9m: Complex 4 (HEAD) 30S-GE81112 (weak residual tRNA)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-10-31
Authors: Schedlbauer, A., Han, X., van Bakel, W., Kaminishi, T., Ochoa-Lizarralde, B., Iturrioz, I., Capuni, R., Parry, R., Zegarra, R., Gil-Carton, D., Lopez-Alonso, J.P., Barragan Sanz, K., Brandi, L., Gualerzi, C.O., Fucini, P., Connell, S.R.
PDB entry 9h9n: Complex 4 (BODY) 30S-GE81112 (weak residual tRNA)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-10-31
Authors: Schedlbauer, A., Han, X., van Bakel, W., Kaminishi, T., Ochoa-Lizarralde, B., Iturrioz, I., Capuni, R., Parry, R., Zegarra, R., Gil-Carton, D., Lopez-Alonso, J.P., Barragan Sanz, K., Brandi, L., Gualerzi, C.O., Fucini, P., Connell, S.R.
PDB entry 9h9o: Crystal structure of NEDD4 HECT domain in complex with norclomipramine
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2024-10-31
Authors: Cecatiello, V., Maspero, E.
PDB entry 9h9p: Spokes 12 and 13 of the human gamma-tubulin ring complex in complex with CDK5RAP2 and docked MZT2/GCP2-NHD module
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2024-10-31
Authors: Vermeulen, B.J.A., Pfeffer, S.
PDB entry 9h9q: Candida albicans gamma-tubulin small complex within ring-like higher oligomer in complex with Spc72 CM1
Classification: CELL CYCLE
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-10-31
Authors: Vermeulen, B.J.A., Pfeffer, S.
PDB entry 9h9r: Full gamma-tubulin ring complex composed of the Candida albicans gamma-tubulin small complex in complex with Spc72 CM1
Classification: CELL CYCLE
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.2 Å
Deposited: 2024-10-31
Authors: Vermeulen, B.J.A., Pfeffer, S.
PDB entry 9h9s: Crystal structure of a lectin-like protein from Ustilago maydis
Classification: UNKNOWN FUNCTION
Source organism: Mycosarcoma maydis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2024-10-31
Authors: Christ, M., Altegoer, F., Mais, C.N., Kiontke, S., Bange, G.
PDB entry 9h9t: Crystal structure of NEDD4 HECT domain in complex with covalent inhibitor
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-10-31
Authors: Cecatiello, V., Maspero, E., Polo, S., Pasqualato, S.
PDB entry 9h9v: BabyBass soluble domain
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2024-10-31
Authors: Kauffmann, B.
PDB entry 9h9w: Crystal structure of metal-free LmrR_V15Bpy in an open state
Classification: METAL BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-11-01
Authors: Thunnissen, A.M.W.H., Jiang, R., Casilli, F., Aalbers, F., Roelfes, G.
PDB entry 9h9x: Crystal structure of metal-free LmrR_V15Bpy in a closed state
Classification: METAL BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2024-11-01
Authors: Thunnissen, A.M.W.H., Jiang, R., Casilli, F., Aalbers, F., Roelfes, G.
PDB entry 9h9y: Crystal structure of metal-free LmrR_V15Bpy variant BVS in a closed state
Classification: METAL BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-01
Authors: Thunnissen, A.M.W.H., Jiang, R., Casilli, F., Aalbers, F., Roelfes, G.
PDB entry 9h9z: Crystal structure of Cu(II)-bound LmrR_V15Bpy
Classification: METAL BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-11-01
Authors: Thunnissen, A.M.W.H., Jiang, R., Casilli, F., Aalbers, F., Roelfes, G.
PDB entry 9ha0: Crystal structure of Cu(II)-bound LmrR_V15Bpy variant BVS
Classification: METAL BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-11-01
Authors: Thunnissen, A.M.W.H., Jiang, R., Casilli, F., Aalbers, F., Roelfes, G.
PDB entry 9ha1: Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Canonical PET exit Api137
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2024-11-01
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9ha2: Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Alternative PET exit Api137
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2024-11-01
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9ha3: Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2024-11-01
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9ha4: Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.26 Å
Deposited: 2024-11-01
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9ha5: Pooled 50S subunit C_L2 precursor states supplemented with Api137
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-01
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9ha6: mature 50S subunit supplemented with Api137
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2024-11-01
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9ha7: Pooled 50S subunit C-CP_(L22)-~H61 precursor states supplemented with Api137
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.37 Å
Deposited: 2024-11-01
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9haa: a5b3 GABAA Receptor resting state
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-11-02
Authors: Cowgill, J., Fan, C., Howard, R.J., Lindahl, E.
PDB entry 9hab: Crystal structure of a chimeric PPM1H phosphatase with the flap domain of PPM1J
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2024-11-02
Authors: Khan, A.R.
PDB entry 9hac: De novo designed BBF-14 beta barrel with computationally designed BBF-14_b4 binder
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-11-03
Authors: Pacesa, M., Nickel, L., Correia, B.E.
PDB entry 9had: Der f 21 dust mite allergen with computationally designed DerF21_b10 binder
Classification: DE NOVO PROTEIN
Source organism: Dermatophagoides farinae; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-11-03
Authors: Pacesa, M., Nickel, L., Correia, B.E.
PDB entry 9hae: Dust mite allergen Der f 7 with computationally designed DerF7_b2 binder
Classification: DE NOVO PROTEIN
Source organism: Dermatophagoides farinae; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2024-11-03
Authors: Pacesa, M., Nickel, L., Correia, B.E.
PDB entry 9haf: Dust mite allergen Der f 7 with computationally designed DerF7_b2 binder
Classification: DE NOVO PROTEIN
Source organism: Dermatophagoides farinae; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2024-11-03
Authors: Pacesa, M., Nickel, L., Correia, B.E.
PDB entry 9hag: De novo designed beta barrel fold BBF-14
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-11-03
Authors: Pacesa, M., Correia, B.E.
PDB entry 9hah: Structure of the F13 protein of Vaccinia virus in complex with tecovirimat
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-11-04
Authors: Vernuccio, R., Guardado-Calvo, P.
PDB entry 9hai: Pooled 50S subunit C-CP_L2-L28 precursor states supplemented with Api137
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2024-11-04
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9haj: Structure of compound 1 bound to SARS-CoV-2 main protease
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.276 Å
Deposited: 2024-11-04
Authors: Mac Sweeney, A., Hazemann, J.
PDB entry 9hak: Structure of compound 119 bound to SARS-CoV-2 main protease
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-11-04
Authors: Mac Sweeney, A., Hazemann, J.
PDB entry 9hal: Pooled 50S subunit d126_(L29)-/(L22)- precursor states supplemented with Api137
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.49 Å
Deposited: 2024-11-04
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9ham: C_(L29)-/(L22)- precursor supplemented with Api137
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.06 Å
Deposited: 2024-11-04
Authors: Lauer, S., Nikolay, R., Spahn, C.M.T.
PDB entry 9han: Bovine collagen VI local refinement of C-terminal region
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.33 Å
Deposited: 2024-11-04
Authors: Godwin, A., Snee, M., Roseman, A., Baldock, C.
PDB entry 9hao: BDM91531 inhibitor bound to the transmembrane domain of AcrB
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-11-04
Authors: Mueller, R.T., Herrmann, A., Pos, K.M.
PDB entry 9hap: Cryo-EM structure of inactive human arginine-vasopressin (AVP) V2 receptor (V2R) with tolvaptan
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-11-04
Authors: Bous, J., Fouillen, A., Couvineau, P., Orcel, H., Mary, C., Mendre, C., Schulte, G., Granier, S., Gilles, N., Mouillac, B.