LiteFold/PDB huggingface dataset:
PDB entry 9j82: Cryo-EM structure of wild type Aquifex aeolicus RseP in complex with Fab
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2024-08-20
Authors: Asahi, K., Hirose, M., Aruga, R., Kato, T., Nogi, T.
PDB entry 9j83: Cryo-EM structure of Aquifex aeolicus RseP E18Q mutant in complex with Fab
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5; Escherichia coli; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2024-08-20
Authors: Asahi, K., Hirose, M., Aruga, R., Kato, T., Nogi, T.
PDB entry 9j84: Structureal mechanism of human TRPM3 ion channel inhibition
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.21 Å
Deposited: 2024-08-20
Authors: Yang, T.T., Cheng, X.Y.
PDB entry 9j85: The complex structure of okaE with a-ketoglutarate
Classification: ANTIBIOTIC
Source organism: Penicillium simplicissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-08-20
Authors: Liu, T.H., Yan, W.P.
PDB entry 9j87: Structure of Receptor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-08-20
Authors: Min, H., Kim, K.
PDB entry 9j88: Structures and mechanisms of serine protease inhibitors of Trichinella spiralis and Trichinella pseudospiralis
Classification: STRUCTURAL PROTEIN
Source organism: Trichinella spiralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-08-20
Authors: Chen, C., Xue, L.R.
PDB entry 9j89: zbp1 nucleic acid complex
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2024-08-20
Authors: Gao, A.M., Zhou, C.
PDB entry 9j8a: Structure of antibody BA8 in complex with sulfated peptide from CCR5
Classification: IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-08-20
Authors: Caaveiro, J.M.M., Ujiie, K., Tsumoto, K.
PDB entry 9j8b: Human Glycine Transporter 1 in the Apo State with an Inward-Facing Conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-08-21
Authors: Wei, Y., Li, N., Li, R., Zhao, Y.
PDB entry 9j8c: Human Glycine Transporter 1 in the Sarcosine-Bound State with an Occluded Conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-08-21
Authors: Wei, Y., Li, N., Li, R., Zhao, Y.
PDB entry 9j8d: Human Glycine Transporter 1 in the Iclepertin-Bound State with an Inward-Facing Conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-08-21
Authors: Wei, Y., Li, N., Li, R., Zhao, Y.
PDB entry 9j8e: Structural insights into BirA from Haemophilus influenzae, a bifunctional protein as a biotin protein ligase and a transcriptional repressor
Classification: DNA BINDING PROTEIN
Source organism: Haemophilus influenzae Rd KW20
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-08-21
Authors: Lee, J.Y., Jeong, K.H., Son, S.B., Ko, J.H.
PDB entry 9j8f: Structural insights into BirA from Haemophilus influenzae, a bifunctional protein as a biotin protein ligase and a transcriptional repressor
Classification: LIGASE
Source organism: Haemophilus influenzae Rd KW20
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-08-21
Authors: Lee, J.Y., Jeong, K.H., Son, S.B., Ko, J.H.
PDB entry 9j8g: mouse zbp1 hybrid complex
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-08-21
Authors: Gao, A.M., Zhoiu, C.
PDB entry 9j8i: Mutant of a deep sea bacterial PET hydrolase MtCut
Classification: HYDROLASE
Source organism: Marinactinospora thermotolerans DSM 45154
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2024-08-21
Authors: Shanshan, L., Wei, L., Lijuan, L., Yang, J.
PDB entry 9j8k: Crystal structure of the GluA2 ligand binding core (S1S2J) in complex with fluorophore-ligand conjugate
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2024-08-21
Authors: Fujiwara, T., Adriel, H., Soga, K., Kiyonaka, S., Nango, E.
PDB entry 9j8l: apo form of GMPK
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-08-21
Authors: Wang, L., Ruan, K.
PDB entry 9j8m: Cryo-EM structure of BAF-Lamin A/C IgF-nucleosome complex (High mobility complex)
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.82 Å
Deposited: 2024-08-21
Authors: Horikoshi, N., Miyake, R., Sogawa-Fujiwara, C., Ogasawara, M., Takizawa, Y., Kurumizaka, H.
PDB entry 9j8n: Cryo-EM structure of BAF-Lamin A/C IgF-nucleosome complex (Low mobility complex)
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.14 Å
Deposited: 2024-08-21
Authors: Horikoshi, N., Miyake, R., Sogawa-Fujiwara, C., Ogasawara, M., Takizawa, Y., Kurumizaka, H.
PDB entry 9j8o: Cryo-EM structure of BAF-Lamin A/C IgF-H1-nucleosome complex
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.05 Å
Deposited: 2024-08-21
Authors: Horikoshi, N., Miyake, R., Sogawa-Fujiwara, C., Ogasawara, M., Takizawa, Y., Kurumizaka, H.
PDB entry 9j8p: Cryo-EM structure of human TUT1 complexed with U6 snRNA
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-08-21
Authors: Yamashita, S., Tomita, K.
PDB entry 9j8q: MprF from Pseudomonas aeruginosa in GDN micelle, C2 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-21
Authors: Jha, S., Vinothkumar, K.R.
PDB entry 9j8r: MprF from Pseudomonas aeruginosa in GDN micelle, C1 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-21
Authors: Jha, S., Vinothkumar, K.R.
PDB entry 9j8s: MprF from Pseudomonas aeruginosa in nanodisc, C2 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-08-21
Authors: Jha, S., Vinothkumar, K.R.
PDB entry 9j8t: Crystal structure of SARS-CoV-2 main protease in complex with Mp-4L2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2024-08-21
Authors: Shi, Y.S., Yang, J.Y., Wang, M.W.
PDB entry 9j8u: Crystal structure of SARS-CoV-2 main protease in complex with Mp-4D7
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2024-08-21
Authors: Shi, Y.S., Yang, J.Y., Wang, M.W.
PDB entry 9j8v: TSWV L protein in complex with ribavirin 5-triphosphate
Classification: VIRAL PROTEIN
Source organism: Orthotospovirus tomatomaculae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-08-21
Authors: Cao, L., Wang, X.
PDB entry 9j8w: Cryo-EM structure of NCP-UV-DDB complex containing CPD
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2024-08-21
Authors: Matsumoto, S., Takizawa, Y., Ogasawara, M., Hashimoto, K., Negishi, L., Xu, W., Tachibana, H., Yamamoto, J., Iwai, S., Sugasawa, K., Kurumizaka, H.
PDB entry 9j8z: Cryo-EM structure of human HCAR1-Gi complex without ligand (apo state)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-08-21
Authors: Xin, P., Fang, Y.
PDB entry 9j90: Crystal structure of Pseudomonas aeruginosa SuhB complexed with Gallic acid in orthorhombic space group
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-08-21
Authors: Yadav, V.K., Shukla, M., Maji, S., Bhattacharyya, S.
PDB entry 9j91: Structures and mechanisms of serine protease inhibitors of Trichinella spiralis and Trichinella pseudospiralis
Classification: STRUCTURAL PROTEIN
Source organism: Trichinella pseudospiralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-21
Authors: Chen, C., Xue, L.R.
PDB entry 9j92: Native GluA1/GluA4-CNIH3 complex in resting state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2024-08-22
Authors: Li, X., Li, R., Wei, Y., Zhao, Y.
PDB entry 9j93: Native GluA1/GluA4 ATD dimer binding with 1D8 and 11B8
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2024-08-22
Authors: Li, X., Li, R., Wei, Y., Zhao, Y.
PDB entry 9j94: Native GluA1/GluA4-CNIH3 complex in active state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-08-22
Authors: Li, X., Li, R., Wei, Y., Zhao, Y.
PDB entry 9j95: Native GluA1/GluA4-CNIH3 complex in desensitized state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.26 Å
Deposited: 2024-08-22
Authors: Li, X., Li, R., Wei, Y., Zhao, Y.
PDB entry 9j97: Closed structure of human XPR1
Classification: TRANSPORT PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-22
Authors: Wang, Y., Wang, Y., Yang, H., Shen, H.
PDB entry 9j98: Open structure of human XPR1
Classification: TRANSPORT PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2024-08-22
Authors: Wang, Y., Wang, Y., Yang, H., Shen, H.
PDB entry 9j99: Substrate-engaged TOM complex from yeast
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-08-22
Authors: Yang, Y.Q., Wang, G.P.
PDB entry 9j9a: Staphylococcus aureus exfoliative toxin D
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-08-22
Authors: Tonozuka, T.
PDB entry 9j9b: Substrate-engaged TIM23 complex from yeast
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae S288C; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.83 Å
Deposited: 2024-08-22
Authors: Yang, Y.Q., Wang, G.P.
PDB entry 9j9d: Crystal structure of ALK5 kinase domain in complex with inhibitor HM-279
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.337 Å
Deposited: 2024-08-22
Authors: Arai, M., Hanada, M., Taniguchi, H., Ohmoto, H., Naka, K., Sawa, M.
PDB entry 9j9e: Cryo-EM structure of the type VII CRISPR-Cas14 effector complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Spirochaetota bacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-08-22
Authors: Hiraizumi, M., Yamashita, K., Nishimasu, H.
PDB entry 9j9f: Bovine ABCC1 conformation 1
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2024-08-22
Authors: Zhong, C., Wang, F., Liu, Z., Yu, G.
PDB entry 9j9g: Bovine ABCC1 conformation 2
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-08-22
Authors: Zhong, C., Wang, F., Liu, Z., Yu, G.
PDB entry 9j9h: High-resolution cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to RACK1 and E-tRNA
Classification: RIBOSOME
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-08-22
Authors: Yan, X.F., Gao, Y.G.
PDB entry 9j9i: High-resolution cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to E-tRNA
Classification: RIBOSOME
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2024-08-22
Authors: Yan, X.F., Gao, Y.G.
PDB entry 9j9j: Nitrophenol monooxygenase RsPNPA from Rhodococcus sp. 21391
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus sp. 21391
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-08-22
Authors: Yang, J., Li, R., Lin, S., Long, L.
PDB entry 9j9k: Glucosyl transferase NbUGT72AY1 co-crystallized with Scopoletin and UDP2F glucose
Classification: TRANSFERASE
Source organism: Nicotiana benthamiana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2024-08-22
Authors: Arold, S.T., Hameed, U.F.S.
PDB entry 9j9l: artificial mononuclear Zn-bound metalloprotein 1 (M1:Zn)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-22
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9m: artificial mononuclear Zn-bound metalloprotein 1 (M1:Mn)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9n: artificial mononuclear Zn-bound metalloprotein 2 (M2:Zn)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9o: artificial dinuclear Zn-bound metalloprotein 1 (D1:2Zn)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9p: artificial mononuclear Zn-bound metalloprotein 3 (M3:Zn)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.47 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9q: artificial mononuclear Cu-bound metalloprotein 6 (M6:Cu)
Classification: ISOMERASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9r: artificial mononuclear Zn-bound metalloprotein 6 (M6:Zn)
Classification: ISOMERASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9s: artificial mononuclear Zn-bound metalloprotein 5 (M5:Zn)
Classification: ISOMERASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9t: artificial mononuclear Zn-bound metalloprotein 4 (M4:Zn)
Classification: MEMBRANE PROTEIN
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9u: artificial dinuclear Mn-bound metalloprotein 2 (D2:Mn)
Classification: ISOMERASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9v: artificial dinuclear Fe-bound metalloprotein 2 (D2:Fe)
Classification: ISOMERASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-08-23
Authors: Jeong, W.J., Song, W.J.
PDB entry 9j9w: A broad-spectrum anti-fungal effector dictates bacterial-fungal interkingdom interactions
Classification: TOXIN
Source organism: Paracidovorax citrulli AAC00-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-23
Authors: Yan, S.Q., Dong, T.
PDB entry 9j9x: Tetrahymena Ribozyme L-16 complex with small molecule inhibitor ZPT-084
Classification: RNA
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-08-23
Authors: Pan, Z.L., Hu, H., Su, Z.M.
PDB entry 9j9z: Cryo-EM structure of Outward state Anhydromuropeptide permease (AmpG) complex with GlcNAc-1,6-anhMurNAc
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; synthetic construct; Yokenella regensburgei
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-08-23
Authors: Chang, N., Kim, U., Cho, H.
PDB entry 9ja0: The capsid protein of HIV 1
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-08-23
Authors: Yi, G., Ma, J., Zhang, P.
PDB entry 9ja1: The RNA polymerase II elongation complex from Saccharomyces cerevisiae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-08-23
Authors: Yi, G., Ma, J., Zhang, P.
PDB entry 9ja3: Herpes simplex virus type 1 polymerase machinery in complex with duplex DNA, acyclovir triphosphate and calcium ions
Classification: REPLICATION
Source organism: Human herpesvirus 1 (strain 17); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-08-24
Authors: Wu, Y.Q., Chen, X.L., Jiang, Z.Y., Li, D.Y., Zhang, Z.Y., Dong, C.J.
PDB entry 9ja4: artificial dinuclear Zn-bound metalloprotein 2 (D2:Zn)
Classification: ISOMERASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-08-24
Authors: Jeong, W.J., Song, W.J.
PDB entry 9ja5: Cryo-EM structure of Tdk1-Bdf1 complex
Classification: CELL CYCLE
Source organism: Schizosaccharomyces pombe 972h-; Streptococcus sp. group G
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-08-24
Authors: Zhang, J., Ye, K.
PDB entry 9ja6: Cryo-EM structure of Tdk1 tetramer complex
Classification: CELL CYCLE
Source organism: Schizosaccharomyces pombe 972h-; Streptococcus sp. group G
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2024-08-24
Authors: Zhang, J., Ye, K.
PDB entry 9ja7: Crystal structure of theophylline aptamer obtained in the presence of caffeine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2024-08-24
Authors: Kondo, J., Ohtani, Y.
PDB entry 9ja8: Crystal structure of human phosphodiesterase 10A in complex with N-(2-amino-2-thioxoethyl)-2-(3-(3-(dimethylcarbamoyl)-6-fluoroimidazo[1,2-a]pyridin-2-yl)azetidin-1-yl)quinoline-4-carboxamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-08-24
Authors: Zhang, F.C., Huang, Y.Y., Luo, H.B., Guo, L.
PDB entry 9ja9: Crystal structure of theophylline aptamer
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2024-08-24
Authors: Kondo, J., Ohtani, Y.
PDB entry 9jaa: P[28] rotavirus VP8*
Classification: VIRAL PROTEIN
Source organism: Rotavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2024-08-24
Authors: Zheng, Y., Yan, J.
PDB entry 9jab: Transition State Mimic(GMPK in complex with ADP, GMP , Mg2+, K+ and AlF4-)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-08-24
Authors: Wang, L., Ruan, K.
PDB entry 9jac: GMPK in complex with GMP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-08-24
Authors: Wang, L., Ruan, K.
PDB entry 9jad: GMPK in complex with GMP and K+
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-08-24
Authors: Wang, L., Ruan, K.
PDB entry 9jae: GMPK(S37P mutant)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-08-24
Authors: Wang, L., Ruan, K.
PDB entry 9jaf: GMPK in complex with GMP and sulfate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-24
Authors: Wang, L., Ruan, K.
PDB entry 9jag: GMPK in complex with ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-24
Authors: Wang, L., Ruan, K.
PDB entry 9jah: GMPK in complex with GMP, ATPgammaS and K+
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-08-24
Authors: Wang, L., Ruan, K.
PDB entry 9jai: GMPK in complex with GMP and ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-08-24
Authors: Wang, L., Ruan, K.
PDB entry 9jaj: GMPK in complex with GDP and ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-08-24
Authors: Wang, L., Ruan, K.
PDB entry 9jak: P[28] rotavirus VP8* protein with LNFP-I
Classification: VIRAL PROTEIN
Source organism: Rotavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2024-08-24
Authors: Zheng, Y., Yan, J.
PDB entry 9jal: Cryo-EM structure of MPXV core protease in complex with compound A1
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2024-08-25
Authors: Gao, Y., Xie, X., Lan, W., Wang, W., Yang, H.
PDB entry 9jam: Cryo-EM structure of MPXV core protease in complex with compound A3
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-08-25
Authors: Gao, Y., Xie, X., Lan, W., Wang, W., Yang, H.
PDB entry 9jan: Cryo-EM structure of MPXV protease in complex with compound A4
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-08-25
Authors: Gao, Y., Xie, X., Lan, W., Wang, W., Yang, H.
PDB entry 9jao: The structure of SMARCAD1 bound to the hexasome in the presence of ADP-BeFx
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-08-25
Authors: Chen, Z.C., Hu, P.J., Sia, Y.Y., Chen, K.J., Xia, X.
PDB entry 9jap: Helical structure of EfAvs5(SIR2-STAND)
Classification: IMMUNE SYSTEM
Source organism: Escherichia fergusonii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-25
Authors: Wang, Y., Zheng, J.
PDB entry 9jaq: Cryo-EM structure of MPXV core protease in the apo-form
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2024-08-25
Authors: Lan, W., You, T., Li, D., Dong, X., Wang, H., Xu, J., Wang, W., Gao, Y., Yang, H.
PDB entry 9jav: Crystal structure of NAD-dependent methanol dehydrogenase 2 from Bacillus methanolicus MGA3 in complex with NAD+
Classification: OXIDOREDUCTASE
Source organism: Bacillus methanolicus MGA3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-25
Authors: Kong, X.D., Ma, B.D.
PDB entry 9jaw: Crystal structure of NAD-dependent methanol dehydrogenases 2 from Bacillus methanolicus MGA3
Classification: OXIDOREDUCTASE
Source organism: Bacillus methanolicus MGA3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-08-25
Authors: Kong, X.D., Ma, B.D.
PDB entry 9jax: Crystal structure of NUDIX hydrolase from Bacillus methanolicus
Classification: HYDROLASE
Source organism: Bacillus methanolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-08-25
Authors: Kong, X.D., Ma, B.D.
PDB entry 9jaz: Cryo-EM structure of the class I amyloid-beta 42 fibril containing a D-Asp at position 23
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-08-26
Authors: Hsiao, L.C., Lee, C.H., Hsu, M.F., Hsu, S.T.
PDB entry 9jb0: Cryo-EM structure of the class II amyloid-beta 42 fibril containing a D-Asp at position 23
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-08-26
Authors: Hsiao, L.C., Lee, C.H., Hsu, M.F., Hsu, S.T.
PDB entry 9jb1: Cryo-EM structure of the type I amyloid-beta 42 fibril containing a D-Asp at positions 7 and 23
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-08-26
Authors: Hsiao, L.C., Lee, C.H., Hsu, M.F., Hsu, S.T.
PDB entry 9jb2: Cryo-EM structure of the type II amyloid-beta 42 fibril containing a D-Asp at positions 7 and 23
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-08-26
Authors: Hsiao, L.C., Lee, C.H., Hsu, M.F., Hsu, S.T.
PDB entry 9jb3: Crystal structure of DH domain of human FGD6
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-08-26
Authors: Liu, Z.C., Chuan, J.L., Wang, G.G.
PDB entry 9jb5: Crystal structure of Arabidopsis theliana FRATAXIN HOMOLOG
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-08-26
Authors: Zhang, J., Wang, J., Liu, L.
PDB entry 9jb6: Crystal structure of AcrIIC1Boe
Classification: HYDROLASE
Source organism: Bacteriophage sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2024-08-26
Authors: Xiao, Y., Wang, Z.
PDB entry 9jb7: Multidrug resistance-associated protein 2 in complex with SN-38G
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2024-08-26
Authors: Yun, C.H., Zhao, P.
PDB entry 9jbd: Crystal Structure of the MoaE-like domain within Rv3323c from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-08-26
Authors: Cho, H.J., Yang, S.H.
PDB entry 9jbe: Cryo-EM structure of the human LYCHOS in complex with cholesterol and cholesteryl hemisuccinate in the contracted state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-08-27
Authors: Yu, S., Liang, L.
PDB entry 9jbf: Cryo-EM structure of the human LYCHOS Y57A mutant in complex with cholesteryl hemisuccinate in the contracted state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-08-27
Authors: Yu, S., Liang, L.
PDB entry 9jbg: Cryo-EM structure of the human LYCHOS in complex with lipids in the expanded state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.76 Å
Deposited: 2024-08-27
Authors: Yu, S., Liang, L.
PDB entry 9jbh: Cryo-EM structure of the human LYCHOS PLD homodimer
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2024-08-27
Authors: Yu, S., Liang, L.
PDB entry 9jbi: Cryo-EM structure of the human LYCHOS Y57A non-canonical dimer in the expanded state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.49 Å
Deposited: 2024-08-27
Authors: Yu, S., Liang, L.
PDB entry 9jbj: Cryo-EM structure of the human LYCHOS Y57A/R61A mutant in the expanded state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2024-08-27
Authors: Yu, S., Liang, L.
PDB entry 9jbl: Crystal structure of amyloidogenic peptide Bz-FFAALL-NH2
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2024-08-27
Authors: Sawazaki, T., Murai, F., Yamamoto, K., Sasaki, D., Sohma, Y.
PDB entry 9jbm: P5A-ATPase ATP13A1 reconstructed in nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.83 Å
Deposited: 2024-08-27
Authors: Li, Y., Liao, J.
PDB entry 9jbn: Cryo-EM structure of the Arabidopsis EDS1-PAD4-ADR1 immune complex in the presence of pRib-AMP
Classification: IMMUNE SYSTEM
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-08-27
Authors: Wang, H., Tan, J., Cui, X., Song, S., Yan, C., Qi, T.
PDB entry 9jbo: Cryo-EM structure of human SOD1 (WT) amyloid filament
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2024-08-27
Authors: Baek, Y., Kim, H., Lee, D., Kim, D., Jo, E., Roh, S.-H., Ha, N.-C.
PDB entry 9jbp: Cryo-EM structure of human SOD1 (C6A/C111A) amyloid filament
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-08-27
Authors: Baek, Y., Kim, H., Lee, D., Kim, D., Jo, E., Roh, S.-H., Ha, N.-C.
PDB entry 9jbq: Structure of the complex between h1F3 Fab and PcrV fragment
Classification: ANTIMICROBIAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-08-27
Authors: Numata, S., Hara, T., Izawa, M., Okuno, Y., Sato, Y., Yamane, S., Maki, H., Sato, T., Yamano, Y.
PDB entry 9jbr: P5A-ATPase ATP13A1 D533N mutant
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-27
Authors: Li, Y., Liao, J.
PDB entry 9jbs: Structure of LAT4 in the apo state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-08-27
Authors: Yin, Y.X., Ding, D., Lu, Y.S., Chen, H.Y.
PDB entry 9jbt: Structure of LAT4 in complex with Phe
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-08-27
Authors: Yin, Y.X., Ding, D., Lu, Y.S., Chen, H.Y.
PDB entry 9jbu: Structure of LAT4 in complex with digitonin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-08-27
Authors: Yin, Y.X., Ding, D., Lu, Y.S., Chen, H.Y.
PDB entry 9jbv: Structure of Engineered Coagulation Factor VIII with Enhanced Secretion and Coagulation Potential
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-08-27
Authors: Kio, H., Osamu, N., Tsukasa, O.
PDB entry 9jbx: P5A-ATPase ATP13A1 in E1P state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2024-08-27
Authors: Li, Y., Liao, J.
PDB entry 9jby: The cryo-EM structure of Ac-K58W_G51DA53T a-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-08-27
Authors: Zhao, Q.Y., Tao, Y.Q., Liu, C., Li, D.
PDB entry 9jbz: P5A-ATPase ATP13A1 in E2P state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2024-08-27
Authors: Li, Y., Liao, J.
PDB entry 9jc0: Multidrug resistance-associated protein 2 in complex with MK-571 and ATP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2024-08-27
Authors: Yun, C.H., Zhao, P.
PDB entry 9jc1: Engineering of ATP synthase
Classification: MEMBRANE PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-08-28
Authors: Hamaguchi-Suzuki, N., Ueno, H., Yasuda, K., Marui, R., Adachi, N., Senda, T., Noji, H., Murata, T.
PDB entry 9jc2: Engineering of ATP synthase Fo
Classification: MEMBRANE PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2024-08-28
Authors: Hamaguchi-Suzuki, N., Ueno, H., Yasuda, K., Marui, R., Adachi, N., Senda, T., Noji, H., Murata, T.
PDB entry 9jc3: The cryo-EM structure of Ac-G51DA53T P1 a-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2024-08-28
Authors: Zhao, Q.Y., Tao, Y.Q., Liu, C., Li, D.
PDB entry 9jc4: The cryo-EM structure of Ac-G51DA53T P2 a-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-08-28
Authors: Zhao, Q.Y., Tao, Y.Q., Liu, C., Li, D.
PDB entry 9jc5: The cryo-EM structure of Ac-G51DA53T P3 a-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-08-28
Authors: Zhao, Q.Y., Tao, Y.Q., Liu, C., Li, D.
PDB entry 9jc6: Human H2BW2 nucleosome
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2024-08-28
Authors: Ding, D.B., Ishibashi, T., Nguyen, T.T.
PDB entry 9jc7: Crystal structure of alanyl-tRNA synthetase in complex with ATP and L-alanine
Classification: LIGASE
Source organism: Methylomonas sp. DH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-28
Authors: Son, S.Y., Cha, S.S.
PDB entry 9jc8: Tetrahymena Ribozyme L-16 inhibited state
Classification: RNA
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2024-08-29
Authors: Pan, Z.L., Hu, H., Su, Z.M.
PDB entry 9jc9: CalA-like lipase from Ustilago trichophora (S200A mutant)
Classification: HYDROLASE
Source organism: Ustilago trichophora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2024-08-29
Authors: Xue, B., Ling, L.H., Jia, X., Yew, W.S.
PDB entry 9jca: CalA-like lipase from Ustilago trichophora
Classification: HYDROLASE
Source organism: Ustilago trichophora
Experimental method: X-RAY DIFFRACTION
Resolution: 3.33 Å
Deposited: 2024-08-29
Authors: Xue, B., Ling, L.H., Jia, X., Yew, W.S.
PDB entry 9jcb: CalA-like lipase from Kalmanozyma brasiliensis
Classification: HYDROLASE
Source organism: Kalmanozyma brasiliensis GHG001
Experimental method: X-RAY DIFFRACTION
Resolution: 3.46 Å
Deposited: 2024-08-29
Authors: Xue, B., Ling, L.H., Jia, X., Yew, W.S.
PDB entry 9jcc: Cryo-EM structure of human hexameric pannexin 3 in nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-29
Authors: Zhang, H., Zhang, H., Wang, D.
PDB entry 9jcd: Cryo-EM structure of asymmetric pannexin 3 heptamer in nanodisc class 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-08-29
Authors: Zhang, H., Zhang, H., Wang, D.
PDB entry 9jce: local refinement of FEM1B bound with TOM20
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2024-08-29
Authors: Zhao, S., Xu, C.
PDB entry 9jcf: Cryo-EM structure of asymmetric pannexin 3 heptamer in nanodisc class 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-08-29
Authors: Zhang, H., Zhang, H.W., Wang, D.
PDB entry 9jcg: Cryo-EM structure of asymmetric pannexin 3 hexamer in nanodisc class 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-08-29
Authors: Zhang, H., Zhang, H.W., Wang, D.
PDB entry 9jch: Cryo-EM structure of asymmetric pannexin 3 hexamer in nanodisc class 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2024-08-29
Authors: Zhang, H., Zhang, H.W., Wang, D.
PDB entry 9jcj: Cryo-EM structure of asymmetric pannexin 3 heptamer in GDN class 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-08-29
Authors: Zhang, H., Zhang, H.W., Wang, D.
PDB entry 9jcl: ADP-bound purinergic receptor 1 with L266P mutant in complex with miniGs/q
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2024-08-29
Authors: Gu, Q.C., Wang, T.X., Tang, W.Q.
PDB entry 9jcm: Crystal structure of Zea mays 3-phosphoglycerate dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 3.49 Å
Deposited: 2024-08-29
Authors: Li, R., Wang, C.
PDB entry 9jcn: Crystal structure of Zea mays 3-phosphoglycerate dehydrogenase S282L mutant
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 3.48 Å
Deposited: 2024-08-30
Authors: Li, R., Wang, C.
PDB entry 9jco: Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 6.5
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.36 Å
Deposited: 2024-08-30
Authors: You, C., Xu, H.E., Jiang, Y.
PDB entry 9jcp: Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gq protein complex at pH 7.4
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-08-30
Authors: Xu, H.E., You, C., Jiang, Y.
PDB entry 9jcq: Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 7.4
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-08-30
Authors: You, C., Xu, H.E., Jiang, Y.
PDB entry 9jcs: Multidrug resistance-associated protein 2 in complex with MK-571
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2024-08-30
Authors: Yun, C.H., Zhao, P.
PDB entry 9jct: Cryo-EM structure of asymmetric pannexin 3 heptamer in GDN class 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2024-08-30
Authors: Zhang, H., Zhang, H., Wang, D.
PDB entry 9jcu: Compound bound to ROCK2 kinase domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2024-08-30
Authors: Yan, H.
PDB entry 9jcv: Cryo-EM structure of human TauT in the apo state, determined in an inward-facing open conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2024-08-30
Authors: Qu, Q., Chao, Y., Zhou, Z.
PDB entry 9jcw: Crystal structure of human MIGA1 LD targeting domain
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-30
Authors: Yang, K.L., Zhang, L.
PDB entry 9jcx: Crystal structure of the HCoV-HKU1 RBD and TMPRSS2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human coronavirus HKU1 (isolate N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-08-30
Authors: Wang, H., Li, M., Duan, Y., Yang, H.
PDB entry 9jcy: Crystal structure of the HCoV-HKU1 RBD in complex with Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Human coronavirus HKU1 (isolate N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-08-30
Authors: Wang, H., Zhao, Z., Liu, X., Duan, Y., Yang, H.
PDB entry 9jcz: Cryo-EM structure of human TauT in presence of taurine, determined in an inward-facing occluded conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-08-30
Authors: Qu, Q., Chao, Y., Zhou, Z.
PDB entry 9jd0: Crystal structure of TMPRSS2 in complex with nanobody
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-08-30
Authors: Wang, H., Zhao, Z., Liu, X., Duan, Y., Yang, H.
PDB entry 9jd1: Crystal structure of TMPRSS2 in complex with Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-30
Authors: Wang, H., Liu, X., Zhao, Z., Duan, Y., Yang, H.
PDB entry 9jd3: membrane proteins
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-08-30
Authors: Yu, J., Ge, J.P., Zh, Y.M.
PDB entry 9jd4: taurine transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2024-08-30
Authors: Yu, J., Ge, J.P., Zh, Y.M.
PDB entry 9jd5: Cryo-EM structure of human TauT in presence of Taurocyamine, determined in an inward-facing occluded conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2024-08-30
Authors: Qu, Q., Chao, Y., Zhou, Z.
PDB entry 9jd6: Cryo-EM structure of human TauT in presence of Piperidine-4-sulfonate, determined in an inward-facing occluded conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-08-30
Authors: Qu, Q., Chao, Y., Zhou, Z.
PDB entry 9jd7: The cryo-EM structure of Ac-G51DA53T a-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2024-08-30
Authors: Zhao, Q.Y., Tao, Y.Q., Li, D., Liu, C.
PDB entry 9jd8: The cryo-EM structure of Ac-G51DA53T P5 a-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2024-08-30
Authors: Zhao, Q.Y., Tao, Y.Q., Li, D., Liu, C.
PDB entry 9jd9: taurine transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-08-30
Authors: Yu, J., Ge, J.P., Zh, Y.M.
PDB entry 9jda: taurine transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-08-31
Authors: Yu, J., Ge, J.P., Zh, Y.M.
PDB entry 9jdb: Structure of chanoclavine synthase from Claviceps fusiformis
Classification: OXIDOREDUCTASE
Source organism: Claviceps fusiformis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-08-31
Authors: Liu, Z.W., Wang, T., Li, X., Shen, P.P., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9jdc: Structure of chanoclavine synthase from Claviceps fusiformis in complex with prechanoclavine
Classification: OXIDOREDUCTASE
Source organism: Claviceps fusiformis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2024-08-31
Authors: Liu, Z.W., Wang, T., Li, X., Shen, P.P., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9jdd: Crystal structure of the type VI secretion system effector-immunity complex BtaeB CTD-BtaiB from Bacteroides fragilis
Classification: ANTIMICROBIAL PROTEIN
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-31
Authors: Zheng, S.N., Li, W.X., Chen, Z., Gao, X.
PDB entry 9jdg: taurine transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-08-31
Authors: Yu, J., Ge, J.P., Zh, Y.M.
PDB entry 9jdh: Crystal structure of the T6SS effector BtaeB-NTD from Bacteroides fragilis
Classification: ANTIMICROBIAL PROTEIN
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2024-08-31
Authors: Zheng, S.N., Li, W.X., Chen, Z., Gao, X.
PDB entry 9jdi: Crystal structure of the type VI secretion system effector-immunity complex BtpeA CTD-BtpiA from Bacteroides fragilis.
Classification: ANTIMICROBIAL PROTEIN
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-08-31
Authors: Zheng, S.N., Li, W.X., Chen, Z., Gao, X.
PDB entry 9jdj: taurine transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-08-31
Authors: Yu, J., Ge, J.P., Zh, Y.M.
PDB entry 9jdk: The cryo-EM structure of Ac-G51DA53T P6 a-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2024-08-31
Authors: Zhao, Q.Y., Tao, Y.Q., Li, D., Liu, C.
PDB entry 9jdl: taurine transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Deposited: 2024-08-31
Authors: Yu, J., Ge, J.P., Zh, Y.M.
PDB entry 9jdm: Cryo-EM structure of human TRPV3 determined in MSP2N2 nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2024-08-31
Authors: Lu, X., Yao, J.
PDB entry 9jdn: Crystal structure of alanyl-tRNA synthetase L219M mutant in complex with ATP and L-alanine
Classification: LIGASE
Source organism: Methylomonas sp. DH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18007 Å
Deposited: 2024-08-31
Authors: Son, S.Y., Cha, S.S.
PDB entry 9jdo: LCN2 in complex with phosphoserine
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-08-31
Authors: Qin, J., Hu, X., Wang, L., Wei, H.
PDB entry 9jdq: Crystal structure of reductase EA
Classification: OXIDOREDUCTASE
Source organism: Exiguobacterium acetylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2024-09-01
Authors: Tang, J., Liuqing, C.
PDB entry 9jdr: Structure of the auxin importer AUX1 in Arabidopsis thaliana in the apo state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-09-01
Authors: Sun, L., Liu, X., Wei, H., Yang, Z.
PDB entry 9jds: Structure of the auxin importer AUX1 in Arabidopsis thaliana in the IAA-bound state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-09-01
Authors: Sun, L., Liu, X., Wei, H., Yang, Z.
PDB entry 9jdt: Crystal structure of reductase NaAD
Classification: OXIDOREDUCTASE
Source organism: Novosphingobium aromaticivorans DSM 12444
Experimental method: X-RAY DIFFRACTION
Resolution: 3.26 Å
Deposited: 2024-09-01
Authors: Tang, J., Liuqing, C.