LiteFold/PDB huggingface dataset:
PDB entry 9igw: Ku70/80 bound to 147 bp nucleosome
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2025-02-20
Authors: Hall, C., Chaplin, A.K.
PDB entry 9igx: Ku70/80 bound to 153 bp nucleosome
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2025-02-20
Authors: Hall, C., Chaplin, A.K.
PDB entry 9igy: Structure of a Chimeric Protein Composed of the SNX5 PhoX Domain and the N-terminal domain of NCOA7-AS,crystal form II
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-02-20
Authors: Arnaud-Arnould, M., Rebendenne, A., Tauziet, M., Urbach, S., El Koulali, K., Ricci, E., Wencker, M., Moncorge, O., Blaise, M., Goujon, C.
PDB entry 9igz: GluA4 in complex with TARP-2, resting state, structure of N-terminal domain
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-02-20
Authors: Vega-Gutierrez, C., Herguedas, B.
PDB entry 9ih0: Crystal structure of Vaspin with PolyP45
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2025-02-20
Authors: Useini, A., Strater, N., Heiker, J.T.
PDB entry 9ih5: Crystal structure of the human METTL3-METTL14 in complex with small molecule inhibitor Compound 8
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2025-02-20
Authors: Dutheuil, G., Oukoloff, K.
PDB entry 9ih6: A-SPECTRIN SH3 DOMAIN V9Y, A11V, V23L, M25V, V53L, V58L MUTANT
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2025-02-20
Authors: Vizarraga, D., Fita, I., Cianferoni, D., Delgado, J., Serrano, L.
PDB entry 9ih7: A-SPECTRIN SH3 DOMAIN V9L, A11V, V23I, M25V, V46F, V53L, V58L MUTANT
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2025-02-20
Authors: Vizarraga, D., Fita, I., Cianferoni, D., Delgado, J., Serrano, L.
PDB entry 9ih8: HSV-2 postfusion glycoprotein B
Classification: VIRAL PROTEIN
Source organism: Human herpesvirus 2 strain 333
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2025-02-20
Authors: Vollmer, B., Mulvaney, T., Ebel, H., Nentwig, J., Gruenewald, K.
PDB entry 9ih9: KEAP1 complexed to linear peptide 6
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-02-20
Authors: Ji, X., Lau, K.
PDB entry 9iha: A-SPECTRIN SH3 DOMAIN V9L, A11V, M25V, V46F, V58L MUTANT
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.013 Å
Deposited: 2025-02-20
Authors: Vizarraga, D., Fita, I., Cianferoni, D., Delgado, J., Serrano, L.
PDB entry 9ihc: CryoEM structure of a synthetic antibody, COP-2, in complex with the C-terminal domain of Clostridium perfringens Enterotoxin
Classification: TOXIN
Source organism: Clostridium perfringens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2025-02-21
Authors: Pacesa, M., Goldbach, N., Vecchio, A.J., Correia, B.E.
PDB entry 9ihd: Nucleosome core particle bound by one molecule of DTT-reduced native monomeric myeloperoxidase
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2025-02-21
Authors: Raisch, T., Burn, G.L., Tacke, S., Winkler, M., Prumbaum, D., Thee, S., Zychlinsky, A., Raunser, S.
PDB entry 9ihe: Nucleosome core particle bound by two molecules of DTT-reduced native monomeric myeloperoxidase
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2025-02-21
Authors: Raisch, T., Burn, G.L., Tacke, S., Winkler, M., Prumbaum, D., Thee, S., Zychlinsky, A., Raunser, S.
PDB entry 9ihf: Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2025-02-21
Authors: Raisch, T., Burn, G.L., Tacke, S., Winkler, M., Prumbaum, D., Thee, S., Zychlinsky, A., Raunser, S.
PDB entry 9ihg: Protein kinase CK2 catalytic subunit alpha' (CSNK2A2 gene product) in complex with F2X-Entry screen fragment C02
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2025-02-21
Authors: Werner, C., Harasimowicz, H., Barthel, T., Weiss, M.S., Niefind, K.
PDB entry 9ihh: Ex vivo spore-silk A-ENA fibers
Classification: PROTEIN FIBRIL
Source organism: Bacillus thuringiensis serovar israelensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2025-02-21
Authors: Sleutel, M., Sogues, A., Remaut, H.
PDB entry 9ihi: Protein kinase CK2 catalytic subunit alpha' (CSNK2A2 gene product) in complex with F2X-Entry screen fragment D02
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2025-02-21
Authors: Werner, C., Harasimowicz, H., Barthel, T., Weiss, M.S., Niefind, K.
PDB entry 9ihk: Crystal structure of carrageenan sulfatase Bt3731_S1_30A from human gut bacterium Bacteroides thetaiotaomicron VPI-3731
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-02-21
Authors: Solanki, V., Parnami, J., Hehemann, J.H.
PDB entry 9ihl: Crystal Structure of the Human Nonmuscle Myosin 2A Motor Domain
Classification: MOTOR PROTEIN
Source organism: Dictyostelium discoideum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2025-02-21
Authors: Heiringhoff, R.S., Greve, J.N., Zahn, M., Manstein, D.J.
PDB entry 9iho: Open state without NUQM and without flavoprotein (classification state 4) of Pichia pastoris mitochondrial complex I in cMSP26 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Komagataella pastoris
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-02-21
Authors: Grba, D.N., Hirst, J.
PDB entry 9ihp: Open state without NUQM and with flavoprotein (classification state 3) of Pichia pastoris mitochondrial complex I in cMSP26 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Komagataella pastoris
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2025-02-21
Authors: Grba, D.N., Hirst, J.
PDB entry 9ihq: Closed state with NUQM and without flavoprotein (classification state 2) of Pichia pastoris mitochondrial complex I in cMSP26 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Komagataella pastoris
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-02-21
Authors: Grba, D.N., Hirst, J.
PDB entry 9ihr: Closed state with NUQM and with flavoprotein (classification state 1) of Pichia pastoris mitochondrial complex I in cMSP26 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Komagataella pastoris
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-02-21
Authors: Grba, D.N., Hirst, J.
PDB entry 9ihs: Microbial transglutaminase mutant - D3C/G283C
Classification: TRANSFERASE
Source organism: Streptomyces mobaraensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-06-18
Authors: Suzuki, M., Date, M., Kashiwagi, T., Takahashi, K., Nakamura, A., Tanokura, M., Suzuki, E., Yokoyama, K.
PDB entry 9iht: Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus in complex with acarbose
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.692 Å
Deposited: 2024-06-18
Authors: Zhu, Z.M., Wang, W.W., Yu, F.
PDB entry 9ihu: GH57 family Amylopullulanase from Aquifex aeolicus
Classification: HYDROLASE
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-06-18
Authors: Zhu, Z.M., Wang, W.W., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S., Yu, F.
PDB entry 9ihv: Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant D352N in complex with maltopentaose
Classification: HYDROLASE
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.783 Å
Deposited: 2024-06-18
Authors: Zhu, Z.M., Wang, W.W., Yu, F.
PDB entry 9ihw: Crystal structure of GH57 family amylopullulanase mutant D352N from Aquifex aeolicusin complex with Maltohexaose
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-06-18
Authors: Zhu, Z.M., Wang, W.W., Yu, F.
PDB entry 9ihx: Co-crystal structure of GH57 family amylopullulanase wild type from Aquifex aeolicus with maltopentaose
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-06-18
Authors: Zhu, Z.M., Wang, W.W., Yu, F.
PDB entry 9ii0: Crystal structure of GH57 family amylopullulanase mutant D352N from Aquifex aeolicus in complex with Maltooctaose
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-06-18
Authors: Zhu, Z.M., Wang, W.W., Yu, F.
PDB entry 9ii1: GH57 family Amylopullulanase mutant E256L from Aquifex aeolicus in complex with maltohexaose
Classification: HYDROLASE
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.501 Å
Deposited: 2024-06-18
Authors: Zhu, Z.M., Wang, W.W., Yu, F.
PDB entry 9ii2: Cryo-EM Structure of the 2:2 Complex of mGlu3 and beta-arrestin1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-06-18
Authors: Wen, T.L., Du, M., Yang, X., Shen, Y.Q.
PDB entry 9ii3: Cryo-EM Structure of the 2:1 Complex of mGlu3 and beta-arrestin1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-06-19
Authors: Wen, T.L., Du, M., Yang, X., Shen, Y.Q.
PDB entry 9ii5: Crystal structure of human TRIM21 PRYSPRY in complex with compound 1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2024-06-19
Authors: Zhang, L.Y.
PDB entry 9ii6: Cryo-EM structure of the intracellular domains of BTN2A1-BTN3A1-BTN3A3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2024-06-19
Authors: Gao, W., Zheng, J., Zhu, Y., Huang, Z.
PDB entry 9ii7: RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome containing histone variant H2A.B
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-06-19
Authors: Akatsu, M., Kujirai, T., Rina, H., Ehara, H., Takizawa, Y., Sekine, S., Kurumizaka, H.
PDB entry 9ii8: Crystal structure of Staphylococcus aureus DinG protein in complex with ssDNA
Classification: HYDROLASE/DNA
Source organism: Staphylococcus aureus (strain NCTC 8325 / PS 47); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2024-06-19
Authors: Cheng, K.
PDB entry 9ii9: Crystal structure of SARS-CoV-2 neutralizing antibody K4-66
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-06-19
Authors: Kimura, T.K., Hashiguchi, T.
PDB entry 9iia: Crystal structure of the free histidine prenyltransferase FunA
Classification: TRANSFERASE
Source organism: Fusarium tricinctum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2024-06-19
Authors: Chen, X., Liu, Z., Dai, S., Zou, Y.
PDB entry 9iib: Crystal structure of NodD-EBD (Effector Binding Domain) in complex with hesperetin from Rhizobium leguminosarum bv. vicae 3841
Classification: TRANSCRIPTION
Source organism: Rhizobium leguminosarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-06-19
Authors: Ruan, Y., Dong, S., Zhang, Y., Jeremy, M.
PDB entry 9iic: Crystal structure of HOIP RING2-LDD in complex with STK4 KD domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2024-06-20
Authors: Wang, Y.R., Zhou, X.D., Pan, L.F.
PDB entry 9iid: Crystal structure of PgAfp
Classification: ANTIMICROBIAL PROTEIN
Source organism: Penicillium chrysogenum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-06-20
Authors: Wang, Y.
PDB entry 9iie: Cryogenic Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2024-06-20
Authors: Destan, E., DeMirci, H.
PDB entry 9iif: Factor inhibiting HIF-1 alpha in complex with Zn(II) and Desidustat
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2024-06-20
Authors: Nakashima, Y., Corner, T.P., Brewitz, L., Schofield, C.J.
PDB entry 9iig: Cryo-EM structure of hetero-bacterioferritin SoBfr12 from Shewanella oneidensis
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis MR-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-06-20
Authors: Gao, H.C., Chen, J.H., Li, Y.X.
PDB entry 9iij: Engineered LmrR with V15 replaced by unnatural amino acid 4-amino-L-phenyl-cysteine
Classification: TRANSCRIPTION
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-06-20
Authors: Zhou, Z., Huang, W.
PDB entry 9iik: Cryo-EM structure of BTN2A1-BTN3A1-BTN3A2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.12 Å
Deposited: 2024-06-20
Authors: Gao, W., Zheng, J., Zhu, Y., Huang, Z.
PDB entry 9iil: Structure of the complex of erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii with nicotinamide adenine dinucleotide in the presence of poly(ethylene glycol) at 2.20 A resolution
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-06-20
Authors: Viswanathan, V., Kumari, A., Singh, A., Kumar, A., Sharma, P., Chopra, S., Jeyakanthan, J., Sharma, S., Raje, C.I., Singh, T.P.
PDB entry 9iim: Structure of the complex of erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii with nicotinamide adenine dinucleotide at 2.74 A resolution.
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2024-06-20
Authors: Viswanathan, V., Kumari, A., Singh, A., Kumar, A., Sharma, P., Chopra, S., Jeyakanthan, J., Sharma, S., Raje, C.I., Singh, T.P.
PDB entry 9iin: Structure of CTF18-PCNA with ATP and Mg2+
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-06-20
Authors: Briola, G.R., Tehseen, M., Al-Amodi, A., Nguyen, P.Q., Savva, C.G., Hamdan, S.M., De Biasio, A.
PDB entry 9iio: J-shaped conformer of amyloid beta (1-40)
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-06-21
Authors: Burton-Smith, R.N., Murata, K.
PDB entry 9iip: Fucokinase part of FKP with beta-L-fucose 1-phosphate
Classification: TRANSFERASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-06-21
Authors: Ko, T.P., Lin, S.W., Hsu, M.F., Lin, C.H.
PDB entry 9iir: human alpha 7 nicotinic acetylcholine receptor in complex with GAT107 and calcium (desensitized state)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-06-21
Authors: Liu, S., Zheng, Y., Tian, C.
PDB entry 9iis: GDP-fucose pyrophosphorylase part of FKP with a SUMO tag
Classification: TRANSFERASE
Source organism: Bacteroides fragilis; Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2024-06-21
Authors: Ko, T.P., Lin, S.W., Hsu, M.F., Lin, C.H.
PDB entry 9iit: Full length structure of FKP in complex with GTP and GDP
Classification: TRANSFERASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-06-21
Authors: Ko, T.P., Lin, S.W., Hsu, M.F., Lin, C.H.
PDB entry 9iiu: Cryo-EM structure of an TEF30-associated intermediate PSII core complex from Chlamydomonas reinhardtii
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-06-21
Authors: Wang, Y., Wang, C., Li, A., Liu, Z.
PDB entry 9iiv: human alpha 7 nicotinic acetylcholine receptor in complex with GAT107 and calcium (open state)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-06-21
Authors: Liu, S., Zheng, Y., Tian, C.
PDB entry 9iiw: A local Cryo-EM structure of Bitter taste receptor TAS2R14
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-06-21
Authors: Yuan, Q., Duan, J., Tao, L., Xu, E.H.
PDB entry 9iix: A Cryo-EM structure of Bitter taste receptor TAS2R14 with Ggust
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-06-21
Authors: Yuan, Q., Duan, J., Tao, L., Xu, E.H.
PDB entry 9iiy: Cryo-EM Structure of EfPiwi-piRNA-target (25-nt, bilobed)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Ephydatia fluviatilis; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-06-21
Authors: Li, Z.Q., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9iiz: Cryo-EM Structure of EfPiwi-piRNA-target (25-nt, comma)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Ephydatia fluviatilis; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-06-21
Authors: Li, Z.Q., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9ij0: Cryo-EM Structure of MILI-piRNA-target (8-nt)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-06-21
Authors: Li, Z.Q., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9ij1: Cryo-EM Structure of MILI-piRNA-target (22-nt, bilobed)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-06-21
Authors: Li, Z.Q., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9ij2: Cryo-EM Structure of MILI-piRNA-target (22-nt, comma)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-06-21
Authors: Li, Z.Q., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9ij3: Cryo-EM Structure of MILI-piRNA-target (26-nt)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-06-21
Authors: Li, Z.Q., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9ij4: Cryo-EM Structure of MILI(K852A)-piRNA-target (26-nt)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-06-21
Authors: Li, Z.Q., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9ij5: Cryo-EM Structure of MILI(K853A)-piRNA-target
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-06-21
Authors: Li, Z.Q., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9ij6: Crystal structure of the complex of erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii with Adenosine phosphate at 2.40 A resolution.
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-06-21
Authors: Viswanathan, V., Kumari, A., Singh, A., Kumar, A., Sharma, P., Chopra, S., Jeyakanthan, J., Sharma, S., Raje, C.I., Singh, T.P.
PDB entry 9ij9: A Cryo-EM structure of Bitter taste receptor TAS2R14 with Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-06-21
Authors: Yuan, Q., Duan, J., Tao, L., Xu, E.H.
PDB entry 9ija: A local Cryo-EM structure of Bitter taste receptor TAS2R14 with Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-06-21
Authors: Yuan, Q., Duan, J., Tao, L., Xu, E.H.
PDB entry 9ijb: Crystal structure and function analysis of a highly potential drug target 6-phosphogluconate dehydrogenase in Mycobacterium tuberculosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74041 Å
Deposited: 2024-06-22
Authors: Wang, Y.Z., Ren, X.Q., Li, T., Zhang, R.D.
PDB entry 9ijc: Crystal structure of the beta,kappa-carrageenase Cgbk16A from Wenyingzhuangia fucanilytica
Classification: HYDROLASE
Source organism: Wenyingzhuangia fucanilytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2024-06-22
Authors: Chang, Y., Chen, F.
PDB entry 9ijd: Carazolol-activated human beta3 adrenergic receptor
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Homo sapiens; Lama glama; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2024-06-22
Authors: Zheng, S., Zhang, S., Dai, S., Chen, K., Gao, K., Lin, B., Liu, X.
PDB entry 9ije: Epinephrine-activated human beta3 adrenergic receptor
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Homo sapiens; Lama glama; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.34 Å
Deposited: 2024-06-22
Authors: Zheng, S., Zhang, S., Dai, S., Chen, K., Gao, K., Lin, B., Liu, X.
PDB entry 9ijf: Structure of ATP-dependent diazotase CmaA6
Classification: LIGASE
Source organism: Kutzneria albida DSM 43870
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2024-06-22
Authors: Katsuyama, Y., Kawai, S., Ohnishi, Y.
PDB entry 9ijj: In situ structure of the central apparatus in mouse sperm axoneme.
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.7 Å
Deposited: 2024-06-23
Authors: Zhu, Y., Yin, G., Sun, F.
PDB entry 9ijk: The CryoEM structure of a C-C bond hydrolase MhpC homotetramer
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-06-24
Authors: Jiang, W.X., Cheng, X.Q., Ma, L.X., Xing, Q.
PDB entry 9ijl: Structure of wild-type aminotransferase from Mycolicibacterium neoaurum in complex with LLP
Classification: TRANSFERASE
Source organism: Mycolicibacterium neoaurum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-06-24
Authors: Wei, H., Cong, L., You, S., Liu, W.
PDB entry 9ijm: Bacterial flagellar sodium-driven stator PomA5PomB2 with 100 mM NaCl and 0.1 mM phenamil
Classification: MEMBRANE PROTEIN
Source organism: Vibrio alginolyticus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2024-06-24
Authors: Nishikino, T., Takekawa, N., Imada, K.
PDB entry 9ijn: STING LBD domain with an agonist DW18343
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-06-25
Authors: Wang, Z.
PDB entry 9ijo: X-ray crystal structure of F46C myoglobin with a covalently linked 4-methyl-2,2'-bipyridine group in complex with Cu2+
Classification: METAL BINDING PROTEIN
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2024-06-25
Authors: Lin, Y.W.
PDB entry 9ijp: Polyphosphate bound alpha-synuclein fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-06-25
Authors: Tao, Y.Q., Liu, C., Li, D.
PDB entry 9ijr: Cryo-EM structure of the orphan GPR52 beta-arrestin 1 complex bound to ligand c17
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2024-06-25
Authors: Lin, X., Xu, F.
PDB entry 9ijs: Cryo-EM structure of the orphan GPR52 bound to beta-arrestin 1 in ligand-free state
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2024-06-25
Authors: Lin, X., Xu, F.
PDB entry 9ijt: Crystal Structure of human Programmed cell death 1 ligand 1 (PD-L1) bound to Small molecule inhibitor Compound-10
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-06-25
Authors: Swaminathan, S., Birudukota, S., Vaithilingam, K., Sadhu, N., Gosu, R., Rajagopal, S.
PDB entry 9iju: Sertraline enhances the deubiquitinase activity of USP7 by binding to its switching loop region
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2024-06-25
Authors: Shi, L., Xu, Z., Chen, X., Xiong, B., Zhang, N.
PDB entry 9ijv: Neuraminidase of A/Switzerland/9715293/2013 H3N2
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2024-06-25
Authors: Wang, X., Ge, J., Li, X.
PDB entry 9ijw: Serine protease inhibitor HCIQ2c1 from Heteractis crispa with TRPA1 mediated antinociceptive activity
Classification: TOXIN
Source organism: Radianthus crispa
Experimental method: SOLUTION NMR
Deposited: 2024-06-25
Authors: Oreshkov, S.D., Mironov, P.A., Menshov, A.S., Paramonov, A.S., Leychenko, E.V., Shenkarev, Z.O., Lyukmanova, E.N.
PDB entry 9ijx: Crystal structure of the mouse Spef1 coiled-coil domain
Classification: CYTOSOLIC PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-06-25
Authors: Ren, J., Li, D., Feng, W.
PDB entry 9ijy: Homo sapiens Xenotropic and Polytropic Retrovirus Receptor 1 (XPR1) with Y22A/E23A/K26A mutations
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-06-25
Authors: He, Q.X., Zhang, R., Chen, Q.F., Li, B.B.
PDB entry 9ijz: Wild type Homo sapiens Xenotropic and Polytropic Retrovirus Receptor 1 (XPR1)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2024-06-25
Authors: He, Q.X., Zhang, R., Chen, Q.F., Li, B.B.
PDB entry 9ik0: Crystal structure of PrfaH encoded by IncX3 plasmids
Classification: TRANSCRIPTION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-06-26
Authors: Yang, J., Lu, Y., Yu, J., Cai, X., Wang, C., Lv, L., Liu, J.
PDB entry 9ik1: Cryo-EM structure of the human P2X3 receptor-compound 26a complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-06-26
Authors: Kim, S., Kim, G.R., Kim, Y.O., Han, X., Nagel, J., Kim, J., Song, D.I., Muller, C.E., Yoon, M.H., Jin, M.S., Kim, Y.C.
PDB entry 9ik2: The co-crystal structure of SARS-CoV-2 Mpro in complex with compound H109
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-06-26
Authors: Feng, Y., Zheng, W.Y., Han, P., Fu, L.F., Qi, J.X.
PDB entry 9ik3: Human Serum Albumin crystallized with T4, pH 7.5
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2024-06-26
Authors: Xiang, W., Yue, Z.L., Su, J.Y.
PDB entry 9ik4: Cryo-EM structure of Arabidopsis thaliana phosphate transporter PHO1;H1
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2024-06-26
Authors: Fang, S., Zhang, X., Zhang, P.
PDB entry 9ik6: Human Serum Albumin crystallized with T4, pH 6.5
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2024-06-26
Authors: Xiang, W., Yue, Z.L., Su, J.Y.
PDB entry 9ik7: Human Serum Albumin crystallized with T4, pH 7.5
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2024-06-26
Authors: Xiang, W., Yue, Z.L., Su, J.Y.
PDB entry 9ik8: Cryo-EM Structure of SSTR1-Gi SST analogs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-06-26
Authors: Wong, T.S., Zeng, Z.C., Xiong, T.T., Gan, S.Y., Du, Y.
PDB entry 9ik9: Cryo-EM Structure of SST analogs bond SSTR1-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-06-26
Authors: Wong, T.S., Zeng, Z.C., Xiong, T.T., Gan, S.Y., Du, Y.
PDB entry 9ika: Crystal structure of the tetrapyrrole binding domain in CoaR
Classification: METAL BINDING PROTEIN
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-06-26
Authors: Liu, X.C.
PDB entry 9ikb: Crystal structure of heterotrimeric Kinesin-2
Classification: TRANSPORT PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.54 Å
Deposited: 2024-06-27
Authors: Ren, J., Zhao, L., Feng, W.
PDB entry 9ikc: Orf virus scaffolding protein Orfv075
Classification: VIRAL PROTEIN
Source organism: Orf virus (strain NZ2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2024-06-27
Authors: Hyun, J., Kim, S., Ko, S., Kim, M., Jang, Y.
PDB entry 9ikd: The apo structure of the MazF-mt3 toxin
Classification: TOXIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2024-06-27
Authors: Xie, W., Jiang, P.
PDB entry 9ikf: Bovine Heart Cytochrome c Oxidase in the Carbon Dioxide-bound Fully Oxidized State
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-06-27
Authors: Muramoto, K., Shinzawa-Itoh, K.
PDB entry 9ikg: Bovine Heart Cytochrome c Oxidase in the Carbon Dioxide-bound Fully Reduced State
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-06-27
Authors: Muramoto, K., Shinzawa-Itoh, K.
PDB entry 9ikh: Bovine Heart Cytochrome c Oxidase in the Nitrous Oxide-bound Fully Oxidized State
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-06-27
Authors: Muramoto, K., Ide, T., Shinzawa-Itoh, K.
PDB entry 9iki: Bovine Heart Cytochrome c Oxidase in the Nitrous Oxide-bound Fully Reduced State
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-06-27
Authors: Muramoto, K., Ide, T., Shinzawa-Itoh, K.
PDB entry 9ikj: Cryo-EM structure of TLP-1a
Classification: PROTEIN FIBRIL
Source organism: algae metagenome
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2024-06-27
Authors: Yan, N., Yan, C., Li, Z., Wang, T.
PDB entry 9ikk: Cryo-EM structure of TLP-1b
Classification: PROTEIN FIBRIL
Source organism: algae metagenome
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2024-06-27
Authors: Yan, N., Yan, C., Li, Z., Wang, T.
PDB entry 9ikm: Cryo-EM structure of TLP-4
Classification: PROTEIN FIBRIL
Source organism: algae metagenome
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-06-27
Authors: Yan, N., Yan, C., Li, Z., Wang, T.
PDB entry 9iko: VF16QK in free solution
Classification: ANTIBIOTIC
Source organism: Podisus maculiventris
Experimental method: SOLUTION NMR
Deposited: 2024-06-28
Authors: Swaleeha, A., Bhattacharyya, S.
PDB entry 9ikp: Crystal structure of human malectin
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2024-06-28
Authors: Si, Y.L.
PDB entry 9ikq: Crystal structure of OPTN LZD in complex with GTP-bound Rab8a(Q67L)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-06-28
Authors: Zhang, J., Pan, L.F.
PDB entry 9ikt: Crystal structure of the tetrapyrrole binding domain in CoaR at 2 angstrom resolution
Classification: METAL BINDING PROTEIN
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2024-06-28
Authors: Liu, X.C.
PDB entry 9iku: Crystal structure of Se-Met CTB10
Classification: BIOSYNTHETIC PROTEIN
Source organism: Cercospora sp. JNU001
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-06-29
Authors: Fu, K., Rao, Y.J.
PDB entry 9ikv: human SLC26A7 with iodide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-06-29
Authors: Li, X., Yang, X., Lu, X., Lin, B., Zhang, Y., Huang, B., Zhou, Y., Huang, J., Wu, K., Zhou, Q., Chi, X.
PDB entry 9ikx: human SLC26A7 apo state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-06-29
Authors: Li, X., Yang, X., Lu, X., Lin, B., Zhang, Y., Huang, B., Zhou, Y., Huang, J., Wu, K., Zhou, Q., Chi, X.
PDB entry 9iky: Crystal structure of 1-2C-T96F TCR in complex with HLA-A*11:01 bound to KRAS-G12V peptide (VVGAVGVGK)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2024-06-29
Authors: Ma, K.K., Tan, S.G., Gao, G.F., Chai, Y.
PDB entry 9ikz: SARS-CoV-2 E-RTC bound to pRNA-nsp9 and GDP-BeF3-
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-06-29
Authors: Yan, L.M., Huang, Y.C., Liu, Y.X., Rao, Z.H., Lou, Z.Y.
PDB entry 9il3: Crystal structure of human malectin in complex with glucose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-06-29
Authors: Si, Y.L.
PDB entry 9il4: Structure and iron-transporting mechanism of BOCT1
Classification: PROTEIN TRANSPORT
Source organism: Mus spicilegus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2024-06-29
Authors: Chen, J., Chen, L.
PDB entry 9il7: Crystal Structure of SME E166A in Complex with Ceftaroline Fosamil
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-06-29
Authors: Dhankhar, K., Hazra, S.
PDB entry 9il8: Crystal Structure of SME-1 Class A Carbapenemase in complex with Durlobactam
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-06-29
Authors: Dhankhar, K., Hazra, S.
PDB entry 9il9: Crystal Structure of SME-1 carbapenemase in complex with Avibactam.
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-06-29
Authors: Dhankhar, K., Hazra, S.
PDB entry 9ila: Crystal structure of human malectin in complex with maltose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-06-29
Authors: Si, Y.L.
PDB entry 9ilb: HUMAN INTERLEUKIN-1 BETA
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 1998-10-22
Authors: Yu, B., Blaber, M., Gronenborn, A.M., Clore, G.M., Caspar, D.L.D.
PDB entry 9ild: Complex structure of Cap3 and CD-NTase
Classification: ANTIFUNGAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.179 Å
Deposited: 2024-06-29
Authors: Li, F.Q., Ma, W.F.
PDB entry 9ile: Crystal Structure of SME-1 Carbapenemase in Complex with Relebactam
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2024-06-29
Authors: Dhankhar, K., Hazra, S.
PDB entry 9ilf: Crystal structure of human malectin in complex with nigerose.
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-06-29
Authors: Si, Y.L.
PDB entry 9ilk: monomeric SarA, truncation of residue 20-124
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus subsp. aureus N315
Experimental method: SOLUTION NMR
Deposited: 2024-06-30
Authors: Xia, B., Fu, D.H.
PDB entry 9ill: monomeric SarA-E89Q in complex with DNA
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus subsp. aureus N315; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2024-06-30
Authors: Xia, B., Fu, D.H.
PDB entry 9iln: ADP-ribosyltransferase 1 (PARP1) catalytic domain bound to a pyrimidine 2,4-diketone derivative inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2024-07-01
Authors: Wang, X.Y., Tian, S.Y., Zhou, J., Xu, B.L.
PDB entry 9ilo: Crystal structure of CTB10-M4
Classification: BIOSYNTHETIC PROTEIN
Source organism: Cercospora sp. JNU001
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2024-07-01
Authors: Fu, K., Rao, Y.J.
PDB entry 9ilp: Structure of the bacteriophage T5 portal complex
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T5
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-07-01
Authors: Peng, Y.N., Liu, H.R.
PDB entry 9ilr: The structure of the GmvT-GmvA-AcCoA ternary complex
Classification: TOXIN
Source organism: Shigella sonnei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-07-01
Authors: Xie, W., Chen, R., Zhao, H.
PDB entry 9ils: The GmvT toxin in complex with the C-terminal fragment of its antitoxin
Classification: TOXIN
Source organism: Shigella sonnei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-07-01
Authors: Xie, W., Chen, R., Zhao, H.
PDB entry 9ilt: Crystal structure of alternative complex III from Chloroflexus aurantiacus
Classification: MEMBRANE PROTEIN
Source organism: Chloroflexus aurantiacus J-10-fl
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2024-07-01
Authors: Xu, X., Wu, W.
PDB entry 9ilv: Structure of the bacteriophage T5 connector complex
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T5
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2024-07-01
Authors: Peng, Y.N., Liu, H.R.
PDB entry 9ilw: Crystal structure of the periplasmic domain of sensor protein EvgS from Escherichia coli str. K-12 substr. MG1655
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-07-01
Authors: Teng, Y., Liu, R., Luo, B.
PDB entry 9ilx: Thanatin VF16QK in complex with LPS
Classification: ANTIBIOTIC
Source organism: Podisus maculiventris
Experimental method: SOLUTION NMR
Deposited: 2024-07-01
Authors: Swaleeha, A., Bhattacharyya, S.
PDB entry 9ily: The Cryo-EM structure of MPXV E5 in the apo state
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2024-07-01
Authors: Cheng, Y.X., Han, P., Wang, H.
PDB entry 9ilz: The Cryo-EM structure of MPXV E5 in complex with ssDNA
Classification: VIRAL PROTEIN/DNA
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-07-01
Authors: Cheng, Y.X., Han, P., Wang, H.
PDB entry 9im0: The Cryo-EM structure of MPXV E5 in complex with ssDNA focused on primase and Zn binding domain
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-07-01
Authors: Cheng, Y.X., Han, P., Wang, H.
PDB entry 9im1: The Cryo-EM structure of MPXV E5 in complex with ssDNA in intermediate state 1
Classification: VIRAL PROTEIN/DNA
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-07-01
Authors: Cheng, Y.X., Han, P., Wang, H.
PDB entry 9im2: The Cryo-EM structure of MPXV E5 in complex with ssDNA in intermediate state 3
Classification: VIRAL PROTEIN/DNA
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2024-07-01
Authors: Cheng, Y.X., Han, P., Wang, H.
PDB entry 9im3: The Cryo-EM structure of MPXV E5 head-to-head double hexamer conformation
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-07-01
Authors: Cheng, Y.X., Han, P., Wang, H.
PDB entry 9im4: Crystal Structure of AF9 YEATS domain F28R mutant in complex with histone H3K9la
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.794 Å
Deposited: 2024-07-02
Authors: Li, H.T., Ma, H.D.
PDB entry 9im5: Tubulin-RB3(MUT)-TTL-Y12
Classification: CELL CYCLE
Source organism: Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2024-07-02
Authors: Yan, W., Yang, J.H.
PDB entry 9im6: Structure of influenza A virus RNA polymerase PB1 and nuclear import host factor RanBP5 complex
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; Influenza A virus (strain A/Puerto Rico/8/1934 H1N1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-07-02
Authors: Uchikubo-Kamo, T., Ishimoto, N., Park, S.Y.
PDB entry 9im7: Crystal structure of mouse Plk1-PBD in complex with R12-4j compound
Classification: TRANSFERASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-07-02
Authors: Kim, E.E., Shin, S.C.
PDB entry 9im8: Mutated ADP-ribosyltransferase 2 (PARP2) catalytic domain bound to a pyrimidine 2,4-diketone derivative inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-07-02
Authors: Wang, X.Y., Tian, S.Y., Zhou, J., Xu, B.L.
PDB entry 9im9: CTB10-M4-(S)-1d complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Cercospora sp. JNU001
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-07-02
Authors: Fu, K., Rao, Y.J.
PDB entry 9ima: Cryo-EM structure for the GPRC5D complexed with Talquetamab Fab
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-07-02
Authors: Jeong, J., Shin, J., Park, J., Cho, Y.
PDB entry 9imb: The crystal structure of human m5C methyltransferase NSUN6 bound to its S-adenosyl-L-methionine analog and a NECTIN-2 3'-UTR RNA substrate
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-07-02
Authors: Lv, M.Q., Zhong, F.M., Pu, T.
PDB entry 9ime: Pilin PilA from Burkholderia thailandensis with bromide ions
Classification: CELL ADHESION
Source organism: Burkholderia thailandensis E264
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-07-03
Authors: Lotangchanintra, T., Wawrzak, Z., Wangkanont, K.
PDB entry 9imh: Structure of urea-treated empty bacteriophage T5 connector complex
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T5
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-07-03
Authors: Peng, Y.N., Liu, H.R.
PDB entry 9imi: Crystal structure of UGT94BY1 in complex with UDP
Classification: TRANSFERASE
Source organism: Platycodon grandiflorus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-07-03
Authors: Jiang, Z., Yuan, Y.
PDB entry 9imj: Bacteriophage T6 topoisomerase II ATPase domain crystal strcuture
Classification: ISOMERASE
Source organism: Enterobacteria phage T6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-07-03
Authors: Xin, Y.H., Chen, Y.T.
PDB entry 9imk: SARS-CoV-2 Replication-Transcription Complex has a dimer architecture (dRTC) in post-capping state
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.01 Å
Deposited: 2024-07-03
Authors: Yan, L.M., Rao, Z.H., Lou, Z.Y.
PDB entry 9iml: Sertraline enhances the deubiquitinase activity of USP7 by binding to its switching loop region
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2024-07-03
Authors: Shi, L., Xu, Z., Chen, X., Xiong, B., Zhang, N.
PDB entry 9imm: SARS-CoV-2 Replication-Transcription Complex has a dimer architecture (local dRTC) in post-capping state
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2024-07-03
Authors: Yan, L.M., Rao, Z.H., Lou, Z.Y.
PDB entry 9imn: Cryo-EM structure of a TEF30-associated intermediate PSII core dimer complex, type I, from Chlamydomonas reinhardtii
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-07-03
Authors: Wang, Y., Wang, C., Li, A., Liu, Z.
PDB entry 9imo: Crystal structure of Tubulin-RB3-TTL-Y12
Classification: CELL CYCLE
Source organism: Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-07-04
Authors: Yan, W., Yang, J.H.
PDB entry 9imp: The complex of PDZ3 and PBM
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2024-07-04
Authors: Huang, S.J.
PDB entry 9imq: Crystal structure of a C45 isoprenyl diphosphate synthase, Rv0562 from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-07-04
Authors: Wang, Q., Yang, Y., Chen, C.-C., Guo, R.-T.
PDB entry 9imr: Crystal structure of geranylgeranyl pyrophosphate synthase Rv0562 from Mycobacterium tuberculosis in complex with IPP
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-07-04
Authors: Wang, Q., Yang, Y., Chen, C.-C., Guo, R.-T.