LiteFold/PDB huggingface dataset:
PDB entry 8gjf: afupcna bound with peptide mimetic
Classification: REPLICATION
Source organism: Aspergillus fumigatus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-03-15
Authors: Vandborg, B., Bruning, J.B.
PDB entry 8gjg: De novo design of high-affinity protein binders to bioactive helical peptides
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-03-15
Authors: Leung, P.J.Y., Bera, A.K., Torres, S.V., Baker, D., Kang, A.
PDB entry 8gjh: Salmonella ArnA
Classification: OXIDOREDUCTASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2023-03-15
Authors: Sousa, M.C., Mitchell, M.E., Gatzeva-Topalova, P.Z.
PDB entry 8gji: De novo design of high-affinity protein binders to bioactive helical peptides
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-03-15
Authors: Torres, S.V., Leung, P.J.Y., Bera, A.K., Baker, D., Kang, A.
PDB entry 8gjj: Multi-drug efflux pump RE-CmeB Apo form
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter jejuni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2023-03-15
Authors: Zhang, Z.
PDB entry 8gjk: Multi-drug efflux pump RE-CmeB bound with ampicillin
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter jejuni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2023-03-16
Authors: Zhang, Z.
PDB entry 8gjl: multi-drug efflux pump RE-CmeB bound with Ciprofloxacin
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter jejuni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2023-03-16
Authors: Zhang, Z.
PDB entry 8gjm: 17b10 fab in complex with full-length SARS-CoV-2 Spike G614 trimer
Classification: VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-03-16
Authors: Kwon, H.J., Zhang, J., Kosikova, M., Tang, W.C., Rodriguez, U.O., Peng, H.Q., Meseda, C.A., Pedro, C.L., Schmeisser, F., Lu, J.M., Zhou, B., Davis, C.T., Wentworth, D.E., Chen, W.H., Shriver, M.C., Pasetti, M.F., Weir, J.P., Chen, B., Xie, H.
PDB entry 8gjn: 17B10 fab in complex with up-RBD of SARS-CoV-2 Spike G614 trimer
Classification: VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-03-16
Authors: Kwon, H.J., Zhang, J., Kosikova, M., Tang, W.C., Rodriguez, U.O., Peng, H.Q., Meseda, C.A., Pedro, C.L., Schmeisser, F., Lu, J.M., Zhou, B., Davis, C.T., Wentworth, D.E., Chen, W.H., Shriver, M.C., Pasetti, M.F., Weir, J.P., Chen, B., Xie, H.
PDB entry 8gjp: A1 Int graft: Adenylation domain 1 core construct from teicoplanin biosynthesis, intermediate selection pocket graft
Classification: LIGASE
Source organism: Actinoplanes teichomyceticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-03-16
Authors: Hansen, M.H., Cryle, M.J.
PDB entry 8gjr: Crystal Structure of Nanobody VHH114 Bound to Its Antigen PA14 Cif
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas aeruginosa PA14; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-03-16
Authors: Simard, A.R., Madden, D.R.
PDB entry 8gjs: Stapled Peptide ALRN-6924 Bound to MDMX
Classification: APOPTOSIS
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-03-16
Authors: Graves, B.J., Janson, C., Lukacs, C.
PDB entry 8gjt: Crystal Structure of HIV-1 LM/HT Clade A/E CRF01 GP120 Core in Complex with TFH-I-116-D1
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-03-16
Authors: Tolbert, W.D., Nguyen, D.N., Pazgier, M.
PDB entry 8gju: Crystal structure of human methylmalonyl-CoA mutase (MMUT) in complex with methylmalonic acidemia type A protein (MMAA), coenzyme A, and GDP
Classification: Isomerase/Hydrolase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2023-03-16
Authors: Mascarenhas, R.M., Ruetz, M., Gouda, H., Yaw, M., Banerjee, R.
PDB entry 8gjv: Chemical synthesis of maxamycins: Intermediate compound 10
Classification: ANTIBIOTIC
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2023-03-16
Authors: Stanfield, R.L., Moore, M.J., Boger, D.L.
PDB entry 8gjw: Structure of a cGAS-like receptor Cv-cGLR1 from C. virginica
Classification: IMMUNE SYSTEM
Source organism: Crassostrea virginica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-03-16
Authors: Li, Y., Morehouse, B.R., Slavik, K.M., Liu, J., Toyoda, H., Kranzusch, P.J.
PDB entry 8gjx: Structure of the human STING receptor bound to 2'3'-cUA
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-03-16
Authors: Morehouse, B.R., Li, Y., Slavik, K.M., Toyoda, H., Kranzusch, P.J.
PDB entry 8gjy: Structure of a cGAS-like receptor Sp-cGLR1 from S. pistillata
Classification: IMMUNE SYSTEM
Source organism: Stylophora pistillata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-16
Authors: Li, Y., Toyoda, H., Slavik, K.M., Morehouse, B.R., Kranzusch, P.J.
PDB entry 8gjz: Structure of a STING receptor from S. pistillata Sp-STING1 bound to 2'3'-cUA
Classification: IMMUNE SYSTEM
Source organism: Stylophora pistillata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2023-03-16
Authors: Li, Y., Toyoda, H., Slavik, K.M., Morehouse, B.R., Kranzusch, P.J.
PDB entry 8gk0: Multi-drug efflux pump RE-CmeB bound with Erythromycin
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter jejuni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2023-03-16
Authors: Zhang, Z.
PDB entry 8gk1: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.83 Å
Deposited: 2023-03-16
Authors: Hess, S.S., Nguyen, A.I.
PDB entry 8gk2: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.89 Å
Deposited: 2023-03-16
Authors: Hess, S.S., Nguyen, A.I.
PDB entry 8gk3: Cytochrome P450 3A7 in complex with Dehydroepiandrosterone sulfate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-03-16
Authors: Liu, J., Scott, E.E.
PDB entry 8gk4: Multi-drug efflux pump RE-CmeB bound with Chloramphenicol
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter jejuni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-03-17
Authors: Zhang, Z.
PDB entry 8gk5: EGFR(T790M/V948R) kinase in complex with osimertinib and benzimidazole allosteric inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-03-17
Authors: Beyett, T.S., Eck, M.J.
PDB entry 8gk6: Crystal structure of extracellular domain of CNNM4 from Echinococcus granulosus
Classification: METAL TRANSPORT
Source organism: Echinococcus granulosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-03-17
Authors: Shahsavan, A., Gehring, K.
PDB entry 8gk7: MsbA bound to cerastecin C
Classification: ANTIMICROBIAL PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2023-03-17
Authors: Chen, Y., Klein, D.
PDB entry 8gk8: R21A Staphylococcus aureus pyruvate carboxylase
Classification: LIGASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2023-03-17
Authors: Laseke, A.J., St.Maurice, M.
PDB entry 8gk9: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2023-03-17
Authors: Hess, S.S., Nguyen, A.I.
PDB entry 8gka: Human TRPV3 tetramer structure, closed conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2023-03-17
Authors: Lansky, S., Betancourt, J.M., Scheuring, S.
PDB entry 8gkb: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2023-03-17
Authors: Hess, S.S., Nguyen, A.I.
PDB entry 8gkc: Atomic model of the core modifying region of human fatty acid synthase in complex with TVB-2640 - C2 refinement
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2023-03-17
Authors: Hasan, S.M.N., Keszei, A., Mazhab-Jafari, M.T.
PDB entry 8gkd: Crystal structure of the peptidoglycan O-acetylesterase Ape1 (amino acids 41-392) from Campylobacter jejuni
Classification: HYDROLASE
Source organism: Campylobacter jejuni subsp. jejuni 81-176
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-17
Authors: Lin, C.S., Murphy, M.E.
PDB entry 8gkf: Phosphopantetheinyl transferase PptT from Mycobacterium tuberculosis in complex with Raltitrexed.
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-03-18
Authors: Krieger, I.V., Singh, A., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 8gkg: Human TRPV3 pentamer structure
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.38 Å
Deposited: 2023-03-18
Authors: Lansky, S., Betancourt, J.M., Scheuring, S.
PDB entry 8gkh: Structure of the Spizellomyces punctatus Fanzor (SpuFz) in complex with omega RNA and target DNA
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Methanosarcina mazei; Spizellomyces punctatus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-03-19
Authors: Xu, P., Saito, M., Zhang, F.
PDB entry 8gkj: Crystal Structure of the Murine MUC16 Specific Antibody AR9.6
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-03-19
Authors: Brooks, C.L., Aguilar, E.N.
PDB entry 8gkk: Crystal Structure of the Humanized MUC16 Specific Antibody huAR9.6
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-03-19
Authors: Brooks, C.L., Murray, B.
PDB entry 8gkl: Crystal Structure of the Humanized MUC16 Specific Antibody huAR9.6
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-03-19
Authors: Brooks, C.L., Aguilar, E.N.
PDB entry 8gkm: A1 Leu graft + Leu: Adenylation domain 1 core construct from teicoplanin biosynthesis, leucine selection pocket graft; leucine bound
Classification: LIGASE
Source organism: Actinoplanes teichomyceticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2023-03-20
Authors: Hansen, M.H., Cryle, M.J.
PDB entry 8gkn: Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with S-naringenin
Classification: TRANSFERASE
Source organism: Tetranychus urticae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-03-20
Authors: Arriaza, R.H., Dermauw, W., Wybouw, N., Van Leeuwen, T., Chruszcz, M.
PDB entry 8gko: Crystal Structure Analysis of Aspergillus fumigatus alkaline protease
Classification: HYDROLASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2023-03-20
Authors: Fernandez, D., Diec, D.D.L., Guo, W., Russi, S.
PDB entry 8gkp: Crystal Structure Analysis of Aspergillus fumigatus alkaline protease
Classification: HYDROLASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-03-20
Authors: Fernandez, D., Diec, D.D.L., Guo, W., Russi, S.
PDB entry 8gkq: Crystal Structure Analysis of Aspergillus fumigatus alkaline protease
Classification: HYDROLASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-03-20
Authors: Fernandez, D., Diec, D.D.L., Guo, W., Russi, S.
PDB entry 8gkr: Crystal structure of human DNA polymerase eta incorporating 5F-dUTP across dA
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.784 Å
Deposited: 2023-03-20
Authors: Jung, H.
PDB entry 8gks: Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF291 inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2023-03-20
Authors: Katinas, J.M., Dann III, C.E.
PDB entry 8gkt: Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF320 inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2023-03-20
Authors: Katinas, J.M., Dann III, C.E.
PDB entry 8gku: Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF355 inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2023-03-20
Authors: Katinas, J.M., Dann III, C.E.
PDB entry 8gkv: Crystal structure of anti-adaptor IraP that regulates RpoS proteolysis
Classification: GENE REGULATION
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.351 Å
Deposited: 2023-03-20
Authors: Shaw, G.X., Gan, J., Suburaman, P., Battesti, A., Zhou, Y.N., Wickner, S., Gottesman, S., Ji, X.
PDB entry 8gkw: Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF359 inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2023-03-20
Authors: Katinas, J.M., Dann III, C.E.
PDB entry 8gkx: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.81 Å
Deposited: 2023-03-20
Authors: Hess, S.S., Nguyen, A.I.
PDB entry 8gky: Human mitochondrial serine hydroxymethyltransferase (SHMT2) Y105F in complex with PLP, glycine and AGF359 inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2023-03-20
Authors: Katinas, J.M., Dann III, C.E.
PDB entry 8gkz: Human mitochondrial serine hydroxymethyltransferase (SHMT2) Y105F in complex with PLP, glycine and AGF362 inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-03-20
Authors: Katinas, J.M., Dann III, C.E.
PDB entry 8gl0: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2023-03-20
Authors: Hess, S.S., Nguyen, A.I.
PDB entry 8gl3: De novo design of monomeric helical bundles for pH-controlled membrane lysis
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-03-20
Authors: Goldbach, N., Bera, A.K., Baker, D., Kang, A.
PDB entry 8gl4: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.76 Å
Deposited: 2023-03-20
Authors: Hess, S.S., Nguyen, A.I.
PDB entry 8gl5: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2023-03-20
Authors: Hess, S.S., Nguyen, A.I.
PDB entry 8gl6: The Type 9 Secretion System in vitro assembled, RemA-CTD substrate bound complex
Classification: MEMBRANE PROTEIN
Source organism: Flavobacterium johnsoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-03-21
Authors: Deme, J.C., Lea, S.M.
PDB entry 8gl7: AncAR1 - progesterone - Tif2
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-03-21
Authors: Little, M.M., Ortlund, E.A.
PDB entry 8gl8: The Type 9 Secretion System Extended Translocon - SprA-PorV-PPI-RemZ-SkpA-SprE complex
Classification: MEMBRANE PROTEIN
Source organism: Flavobacterium johnsoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-03-21
Authors: Deme, J.C., Lea, S.M.
PDB entry 8gl9: Co-crystal structure of caPCNA bound to AOH1160 derivative 1LE
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2023-03-21
Authors: Jossart, J., Kenjic, N., Malkas, L.H., Hickey, R.J., Perry, J.J.
PDB entry 8gla: Co-crystal structure of caPCNA bound to the AOH1996 derivative, AOH1996-1LE
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.77 Å
Deposited: 2023-03-21
Authors: Jossart, J., Perry, J.J.
PDB entry 8glb: Selenomethionine Derivatized Citrate Synthase (CitA) in Mycobacterium tuberculosis with Pyruvate
Classification: CYTOSOLIC PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-03-21
Authors: Pathirage, R., Ronning, D., Favrot, L.
PDB entry 8glc: A1 AncAla: Adenylation domain 1 core construct from ancestral reconstruction of glycopeptide antibiotic biosynthesis, alanine selection pocket
Classification: LIGASE
Source organism: Actinoplanes; Actinoplanes teichomyceticus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2023-03-21
Authors: Hansen, M.H., Cryle, M.J.
PDB entry 8gld: Crystal structure of the peptidoglycan O-acetylesterase Ape1 (amino acids 22-392) from Campylobacter jejuni
Classification: HYDROLASE
Source organism: Campylobacter jejuni subsp. jejuni 81-176
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-03-22
Authors: Lin, C.S., Murphy, M.E.
PDB entry 8gle: Crystal Structure of Human CD1b in Complex with Lysosulfatide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-03-22
Authors: Shahine, A.
PDB entry 8glf: Crystal Structure of Human CD1b in Complex with Sphingomyelin C34:2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-03-22
Authors: Shahine, A.
PDB entry 8glg: Crystal Structure of Human CD1b in Complex with Phosphatidylethanolamine C34:1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-03-22
Authors: Shahine, A.
PDB entry 8glh: Crystal Structure of Human CD1b in Complex with Endogenous PC C40:5
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-03-22
Authors: Farquhar, R., Rossjohn, J., Shahine, A.
PDB entry 8gli: Crystal Structure of Human CD1b in Complex with Mycobacterial C85-GMM
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-03-22
Authors: Balaji, G., Rossjohn, J., Shahine, A.
PDB entry 8glj: The Type 9 Secretion System in vitro assembled, FspA-CTD substrate bound complex
Classification: MEMBRANE PROTEIN
Source organism: Flavobacterium johnsoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-03-22
Authors: Deme, J.C., Lea, S.M.
PDB entry 8glk: The Type 9 Secretion System dGldL peak II, NucA substrate bound complex
Classification: MEMBRANE PROTEIN
Source organism: Flavobacterium johnsoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-03-22
Authors: Deme, J.C., Lea, S.M.
PDB entry 8gll: R149E variant of Citrate Synthase (CitA) in Mycobacterium tuberculosis
Classification: CYTOSOLIC PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-03-22
Authors: Pathirage, R., Ronning, D., Petit, C.
PDB entry 8glm: The Type 9 Secretion System in vivo assembled, RemZ substrate bound complex - conformation 1
Classification: MEMBRANE PROTEIN
Source organism: Flavobacterium johnsoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-03-22
Authors: Deme, J.C., Lea, S.M.
PDB entry 8gln: The Type 9 Secretion System in vivo assembled, RemZ substrate bound complex - conformation 2
Classification: MEMBRANE PROTEIN
Source organism: Flavobacterium johnsoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-03-22
Authors: Deme, J.C., Lea, S.M.
PDB entry 8glo: Haemophilus parainfluenzae Holo HphA
Classification: METAL TRANSPORT
Source organism: Haemophilus haemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.937 Å
Deposited: 2023-03-22
Authors: Shin, H.E., Ng, D., Moraes, T.F.
PDB entry 8glp: mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.67 Å
Deposited: 2023-03-22
Authors: Holm, M., Natchiar, K.S., Rundlet, E.J., Myasnikov, A.G., Watson, Z.L., Altman, R.B., Blanchard, S.C.
PDB entry 8glr: FrlB - Deglycase for 6-phosphofructose lysine
Classification: SUGAR BINDING PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-03-22
Authors: Bell, C.E., Gopalan, V., Kovvali, S.
PDB entry 8gls: Complex of human cystic fibrosis transmembrane conductance regulator (CFTR) and Z1834339853
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-03-23
Authors: Liu, F., Chen, J.
PDB entry 8glt: Backbone model of de novo-designed chlorophyll-binding nanocage O32-15
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2023-03-23
Authors: Redler, R.L., Ennist, N.M., Wang, S., Baker, D., Ekiert, D.C., Bhabha, G.
PDB entry 8glu: CryoEM structure of TnsC(1-503) bound to TnsD(1-318) from E.coli Tn7
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2023-03-23
Authors: Shen, Y., Guarne, A.
PDB entry 8glv: 96-nm repeat unit of doublet microtubules from Chlamydomonas reinhardtii flagella
Classification: MOTOR PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-03-23
Authors: Walton, T., Brown, A.
PDB entry 8glw: CryoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 7:2:1 stoichiometry from E. coli Tn7
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2023-03-23
Authors: Shen, Y., Guarne, A.
PDB entry 8glx: CryoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 6:2:1 stoichiometry from E. coli Tn7
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2023-03-23
Authors: Shen, Y., Guarne, A.
PDB entry 8gly: Crystal structure of T252E-CYP199A4 in complex with 4-hydroxybenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2023-03-23
Authors: Lee, J.H.Z., Bruning, J.B., Bell, S.G.
PDB entry 8glz: Crystal structure of T252E-CYP199A4 in complex with 4-hydroxybenzoic acid. Crystal was initially co-crystallised with 4-methoxybenzoic acid and soaked with 4 mM hydrogen peroxide
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2023-03-23
Authors: Lee, J.H.Z., Bruning, J.B., Bell, S.G.
PDB entry 8gm1: Crystal structure of T252E-CYP199A4 in complex with 4-methoxybenzoic acid soaked with 1 mM hydrogen peroxide
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-03-24
Authors: Lee, J.H.Z., Bruning, J.B., Bell, S.G.
PDB entry 8gm2: Crystal structure of T252E-CYP199A4 in complex with 4-methoxybenzoic acid soaked with 2 mM hydrogen peroxide
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2023-03-24
Authors: Lee, J.H.Z., Bruning, J.B., Bell, S.G.
PDB entry 8gm3: Vibrio harveyi Holo HphA
Classification: METAL TRANSPORT
Source organism: Vibrio harveyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.727 Å
Deposited: 2023-03-24
Authors: Pan, C., Shah, M., Moraes, T.F.
PDB entry 8gm4: Functional construct of the Eukaryotic elongation factor 2 kinase bound to an ATP-competitive inhibitor
Classification: TRANSLATION/Transferase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2023-03-24
Authors: Piserchio, A., Isiorho, E.A., Dalby, K.N., Ghose, R.
PDB entry 8gm5: Functional construct of the Eukaryotic elongation factor 2 kinase bound to Calmodulin, ADP and to the A-484954 inhibitor and showing two conformations for the 498-520 loop
Classification: TRANSLATION/Transferase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2023-03-24
Authors: Piserchio, A., Isiorho, E.A., Dalby, K.N., Ghose, R.
PDB entry 8gm6: Structure of apurinic/apyrimidinic DNA lyase TK0353 from Thermococcus kodakarensis (Selenomethionine)
Classification: LYASE
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-03-24
Authors: Eckenroth, B.E., Gardner, A.F., Doublie, S.
PDB entry 8gm7: Structure of apurinic/apyrimidinic DNA Lyase TK0353 from Thermococcus kodakarensis (Native Crystal Form)
Classification: LYASE
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-03-24
Authors: Eckenroth, B.E., Gardner, A.F., Doublie, S.
PDB entry 8gm8: Crystal structure of shark nonclassical MHC CLASS I, UFA
Classification: IMMUNE SYSTEM
Source organism: Ginglymostoma cirratum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2023-03-24
Authors: Castro, C.D., Adams, E.J.
PDB entry 8gm9: Structure of Citrate Synthase(CitA) in Mycobacterium Tuberculosis
Classification: CYTOSOLIC PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-03-24
Authors: Pathirage, R., Ronning, D., Favrot, L.
PDB entry 8gmb: Crystal structure of the full-length Bruton's tyrosine kinase (PH-TH domain not visible)
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2023-03-24
Authors: Lin, D.Y., Andreotti, A.H.
PDB entry 8gmc: CRYSTAL STRUCTURE OF AP2 ASSOCIATED KINASE 1 COMPLEXED WITH 5-[(4-aminopiperidin-1-yl)methyl]-N-{3-[5-(propan-2-yl)-1,3,4-thiadiazol-2-yl]phenyl}pyrrolo[2,1-f][1,2,4]triazin-4-amine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-03-24
Authors: Muckelbauer, J.K.
PDB entry 8gmd: CRYSTAL STRUCTURE OF AP2 ASSOCIATED KINASE 1 COMPLEXED WITH (5P)-3-({(8R)-5-[(4-aminopiperidin-1-yl)methyl]pyrrolo[2,1-f][1,2,4]triazin-4-yl}amino)-5-[2-(propan-2-yl)-2H-tetrazol-5-yl]phenol
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-03-24
Authors: Muckelbauer, J.K.
PDB entry 8gme: Crystal structure of the gp32-Dda-dT17 complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Tequatrovirus; Tequatrovirus T4; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.98 Å
Deposited: 2023-03-24
Authors: He, X., Yun, M.K., White, S.W.
PDB entry 8gmf: R153M variant of Citrate Synthase (CitA) in Mycobacterium tuberculosis
Classification: CYTOSOLIC PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2023-03-25
Authors: Pathirage, R., Ronning, D.
PDB entry 8gmg: CryoEM structure of P-Glycoprotein in Apo state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-03-25
Authors: Culbertson, A., Liao, M.
PDB entry 8gmh: Crystal Structure of the ternary complex of TelA-LXG, LapA3, and LapA4
Classification: PROTEIN BINDING
Source organism: Streptococcus intermedius B196
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-03-25
Authors: Klein, T.A., Shah, P.Y., Gkragkopoulou, P., Grebenc, D.W., Kim, Y., Whitney, J.C.
PDB entry 8gmi: Citrate Synthase (CitA) in Mycobacterium tuberculosis modified by Ebselen at C143 residue
Classification: CYTOSOLIC PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-03-25
Authors: Pathirage, R., Ronning, D.
PDB entry 8gmj: CryoEM structure of P-Glycoprotein in collapsed closed state under continuous turnover conditions with verapamil
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-03-26
Authors: Culbertson, A., Liao, M.
PDB entry 8gmk: Pyruvate bound structure of Citrate Synthase (CitA) in Mycobacterium Tuberculosis
Classification: CYTOSOLIC PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-03-26
Authors: Pathirage, R., Ronning, D., Yamsek, M.
PDB entry 8gml: Crystal structure of human DNA polymerase eta incorporating 5F-dUTP across dG
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.567 Å
Deposited: 2023-03-26
Authors: Jung, H.
PDB entry 8gmm: Stenotrophomonas maltophilia Holo HphA
Classification: METAL TRANSPORT
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-26
Authors: Shin, H.E., Moraes, T.F.
PDB entry 8gmn: Crystal structure of human C1s in complex with inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-03-26
Authors: Dougan, D.R., Lane, W.
PDB entry 8gmo: Bacteriophage T4 capsid shell containing 9DE insertions into the gp23* major capsid protein subunits
Classification: VIRUS LIKE PARTICLE
Source organism: Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-03-26
Authors: Fokine, A., Rao, V.B.
PDB entry 8gmp: Cryo-EM structure of octameric human CALHM1 with a I109W point mutation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-03-27
Authors: Syrjanen, J.L., Furukawa, H.
PDB entry 8gmq: Chicken CALHM1 purified from mammalian cells
Classification: MEMBRANE PROTEIN
Source organism: Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-03-27
Authors: Syrjanen, J.L., Furukawa, H.
PDB entry 8gmr: Cryo-EM structure of octameric human CALHM1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.76 Å
Deposited: 2023-03-27
Authors: Syrjanen, J.L., Furukawa, H.
PDB entry 8gms: Structure of LexA in complex with RecA filament
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2022-08-22
Authors: Gao, B., Feng, Y.
PDB entry 8gmt: Structure of UmuD in complex with RecA filament
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2022-08-22
Authors: Gao, B., Feng, Y.
PDB entry 8gmu: Structure of lambda repressor in complex with RecA filament
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; Escherichia phage Lambda; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2022-08-22
Authors: Gao, B., Feng, Y.
PDB entry 8gmv: Crystal structure of lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-08-22
Authors: Nam, K.H.
PDB entry 8gmw: Crystal structure of lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-08-22
Authors: Nam, K.H.
PDB entry 8gmx: Crystal structure of pilin-specific sortase SrtC2 from Lactobacillus rhamnosus GG
Classification: HYDROLASE
Source organism: Lacticaseibacillus rhamnosus GG
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2022-08-22
Authors: Das, S., Megta, A.K., Pratap, S., Krishnan, V.
PDB entry 8gmy: Structure of methyltransferase
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-08-22
Authors: Zhang, H., Li, X.Z., Wen, Y.N.
PDB entry 8gmz: Structure of methyltransferase
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-08-22
Authors: Zhang, H., Li, X.Z., Wen, Y.N.
PDB entry 8gn0: Crystal structure of DCBQ-bound photosystem II complex
Classification: PHOTOSYNTHESIS
Source organism: Thermostichus vulcanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-08-22
Authors: Kamada, S., Nakajima, Y., Shen, J.-R.
PDB entry 8gn1: Crystal structure of DBBQ-bound photosystem II complex
Classification: PHOTOSYNTHESIS
Source organism: Thermostichus vulcanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-08-22
Authors: Kamada, S., Nakajima, Y., Shen, J.-R.
PDB entry 8gn2: Crystal structure of PPBQ-bound photosystem II complex
Classification: PHOTOSYNTHESIS
Source organism: Thermostichus vulcanus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-08-22
Authors: Kamada, S., Nakajima, Y., Shen, J.-R.
PDB entry 8gn3: The crystal structure of ZBTB10 ZF1-2 in complex with telomeric vairant repeat TTGGGG
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-08-22
Authors: Li, F.D., Wang, S.M.
PDB entry 8gn4: The crystal structure of ZBTB10 ZF1-2 R767Q in complex with telomeric DNA TTAGGG
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-08-22
Authors: Li, F.D., Wang, S.M.
PDB entry 8gn5: Designed pH-responsive P22 VLP
Classification: VIRUS LIKE PARTICLE
Source organism: Lederbergvirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.02 Å
Deposited: 2022-08-23
Authors: Kim, K.J., Kim, G., Bae, J.H., Song, J.J., Kim, H.S.
PDB entry 8gn6: Crystallization of Sialidase from Porphyromonas gingivalis
Classification: CARBOHYDRATE
Source organism: Porphyromonas gingivalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-08-23
Authors: Dong, W.B.
PDB entry 8gn7: structure of human connexin 40.1 intercellular gap junction channel by cryoEM
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-08-23
Authors: Zhang, H., Wang, D.P.
PDB entry 8gn8: structure of human connexin 40.1 pentameric hemichannel by cryoEM
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-08-23
Authors: Zhang, H., Wang, D.P.
PDB entry 8gn9: SPFH domain of Pyrococcus horikoshii stomatin
Classification: MEMBRANE PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-08-23
Authors: Komatsu, T., Matsui, I., Yokoyama, H.
PDB entry 8gna: Structure of the SbCas7-11-crRNA-NTR complex
Classification: RNA BINDING PROTEIN
Source organism: Candidatus Scalindua brodae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-08-23
Authors: Yu, G., Wang, X., Deng, Z., Zhang, H.
PDB entry 8gnb: structure of human connexin 40.1 side-by-side decamer channel by cryoEM
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-08-23
Authors: Zhang, H., Wang, D.P.
PDB entry 8gne: Crystal structure of human adenosine A2A receptor in complex with an insurmountable inverse agonist, KW-6356.
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-08-23
Authors: Suzuki, M., Saito, J., Miyagi, H., Yasunaga, M.
PDB entry 8gng: Crystal structure of human adenosine A2A receptor in complex with istradefylline.
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2022-08-23
Authors: Suzuki, M., Saito, J., Miyagi, H., Yasunaga, M.
PDB entry 8gnh: Complex structure of BD-218 and Spike protein
Classification: VIRAL PROTEIN/ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2022-08-23
Authors: Wang, B., Xu, H., Su, X.D.
PDB entry 8gni: Human SARM1 bounded with NMN and Nanobody-C6, Conformation 1
Classification: HYDROLASE
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2022-08-24
Authors: Cai, Y., Zhang, H.
PDB entry 8gnj: Human SARM1 bounded with NMN and Nanobody-C6, Conformation 2
Classification: HYDROLASE
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2022-08-24
Authors: Cai, Y., Zhang, H.
PDB entry 8gnk: CryoEM structure of cytosol-facing, substrate-bound ratGAT1
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-24
Authors: Nayak, S.R., Joseph, D., Penmatsa, A.
PDB entry 8gnn: Crystal structure of the human RAD9-RAD1-HUS1-RAD17 complex
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.119 Å
Deposited: 2022-08-24
Authors: Hara, K., Nagata, K., Iida, N., Hashimoto, H.
PDB entry 8go3: Cryo-EM structure of Escherichia coli cytochrome bo3 in DDM detergent
Classification: TRANSLOCASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2022-08-24
Authors: Cao, H.Y., Li, K., Li, C.Y.
PDB entry 8go5: Fungal immunomodulatory protein FIP-nha WT
Classification: IMMUNE SYSTEM
Source organism: Fusarium haematococcum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.809 Å
Deposited: 2022-08-24
Authors: Liu, Y., Bastiaan-Net, S., Hoppenbrouwers, T., Li, Z.
PDB entry 8go6: Fungal immunomodulatory protein FIP-nha N39A
Classification: IMMUNE SYSTEM
Source organism: Fusarium haematococcum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.813 Å
Deposited: 2022-08-24
Authors: Liu, Y., Bastiaan-Net, S., Hoppenbrouwers, T., Li, Z., Wichers, H.J.
PDB entry 8go7: Fungal immunomodulatory protein FIP-nha N5+39A
Classification: IMMUNE SYSTEM
Source organism: Fusarium haematococcum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.303 Å
Deposited: 2022-08-24
Authors: Liu, Y., Bastiaan-Net, S., Hoppenbrouwers, T., Li, Z., Wichers, H.J.
PDB entry 8go8: Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2022-08-24
Authors: Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
PDB entry 8go9: Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Atypical chemokine receptor 2, ACKR2 (D6R)
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2022-08-24
Authors: Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
PDB entry 8goa: Crystal Structure of Glycerol Dehydrogenase in the absence of NAD+
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-08-24
Authors: Park, T., Hoang, H.N., Kang, J.Y., Park, J., Mun, S.A., Jin, M., Yang, J., Jung, C.-H., Eom, S.H.
PDB entry 8gob: Crystal Structure of Glycerol Dehydrogenase in the presence of NAD+
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-08-24
Authors: Park, T., Hoang, H.N., Kang, J.Y., Park, J., Mun, S.A., Jin, M., Yang, J., Jung, C.-H., Eom, S.H.
PDB entry 8goc: Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Vasopressin V2 receptor, V2R
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.18 Å
Deposited: 2022-08-24
Authors: Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
PDB entry 8god: Co-crystal structure of Human Protein-arginine deiminase type-4 (PAD4) with small molecule inhibitor JBI-589
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2022-08-24
Authors: Swaminathan, S., Birudukota, S., Vaithilingam, K., Kandan, S., Asaithambi, K., Kathiresan, N., Gosu, R., Rajagopal, S., Sadhu, N.
PDB entry 8goe: Structure of hSLC19A1+5-MTHF
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-08-24
Authors: Zhang, Q.X., Zhang, X.Y., Zhu, Y.L., Sun, P.P., Gao, A., Zhang, L.G., Gao, P.
PDB entry 8gof: Structure of hSLC19A1+PMX
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-08-24
Authors: Zhang, Q.X., Zhang, X.Y., Zhu, Y.L., Sun, P.P., Gao, A., Zhang, L.G., Gao, P.
PDB entry 8gog: Structure of streptavidin mutant (S112Y-K121E) complexed with biotin-cyclopentadienyl-rhodium (III)(Cp*-Rh(III))
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-08-24
Authors: Sairaman, A., Mukherjee, P., Maiti, D., Bhaumik, P.
PDB entry 8goh: Homotetramic Antiparallel Coiled-Coil of 23-residues LacI C-terminal tetramerization helix
Classification: DNA BINDING PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-08-25
Authors: Kumasaka, T.
PDB entry 8goi: 23-residues Heterotetramic Antiparallel Coiled-Coil Derived From LacI
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-08-25
Authors: Kumasaka, T.
PDB entry 8goj: 23-residues Heterotetramic Antiparallel Coiled-Coil Derived From LacI
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2022-08-25
Authors: Kumasaka, T.
PDB entry 8gok: Legionella OTU deubiquitinase LotA OTU1 domain
Classification: HYDROLASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2022-08-25
Authors: Shin, D., Kang, S.
PDB entry 8gol: crystal structure of SulE
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-08-25
Authors: Liu, B., Ran, T., Wang, W., He, J.
PDB entry 8gom: SARS-CoV-2 specific private TCR RLQ7 in complex with RLQ-HLA-A2
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.783 Å
Deposited: 2022-08-25
Authors: Wu, D., Mariuzza, R.A.
PDB entry 8gon: SARS-CoV-2 specific private TCR RLQ7 in complex with RLQ-T1006I-HLA-A2
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2022-08-25
Authors: Wu, D., Mariuzza, R.A.
PDB entry 8goo: Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-08-25
Authors: Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
PDB entry 8gop: SARS-CoV-2 specific private TCR RLQ7
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-08-25
Authors: Wu, D., Mariuzza, R.A.
PDB entry 8gos: Crystal structure of fluorescent protein RasM
Classification: FLUORESCENT PROTEIN
Source organism: Discosoma sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2022-08-25
Authors: Adachi, M., Kagotani, Y., Shimizu, R.
PDB entry 8got: Crystal structure of wild-type protease 3C from Seneca Valley Virus
Classification: VIRAL PROTEIN
Source organism: Senecavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.989 Å
Deposited: 2022-08-25
Authors: Zhao, H.F., Zhang, H.
PDB entry 8gou: Omicron BA.4/5 SARS-CoV-2 S in complex with TH003 Fab
Classification: VIRAL PROTEIN/ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-08-25
Authors: Guo, Y., Zhang, G., Liang, J., Liu, F., Rao, Z.
PDB entry 8goy: SulE P44R
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.784 Å
Deposited: 2022-08-25
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8gp0: crystal structure of SulE
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2022-08-25
Authors: Liu, B., Ran, T., wang, W., He, J.
PDB entry 8gp3: Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C-X-C chemokine receptor type 4, CXCR4
Classification: SIGNALING PROTEIN
Source organism: Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2022-08-25
Authors: Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
PDB entry 8gp5: Structure of X18 UFO protomer in complex with F6 Fab VHVL domain
Classification: VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.05 Å
Deposited: 2022-08-25
Authors: Niu, J., Xu, Y.W., Yang, B.