LiteFold/PDB huggingface dataset:
PDB entry 9mrm: Desensitized state 2 of the GluA2-gamma2 complex prepared at 37 degrees C
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.52 Å
Deposited: 2025-01-08
Authors: Kumar Mondal, A., Twomey, E.C.
PDB entry 9mrn: Consensus glutamate activated state of the GluA2-gamma2 complex
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2025-01-08
Authors: Kumar Mondal, A., Twomey, E.C.
PDB entry 9mro: Crystal structures of a cyanobacterial DAP epimerase bound to either D,L-aziDAP or D,L-alpha-methyl DAP
Classification: ANTIBIOTIC
Source organism: Anabaena sp. YBS01
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2025-01-08
Authors: Chen, P., Lamer, T., Vederas, J.C., Lemieux, M.J.
PDB entry 9mrp: Crystal structures of a cyanobacterial DAP epimerase bound to L,L-aziDAP
Classification: ANTIBIOTIC
Source organism: Anabaena sp. YBS01
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-01-08
Authors: Chen, P., Lamer, T., Vederas, J.C., Lemieux, M.J.
PDB entry 9mrq: Mycobacterium tuberculosis RNA polymerase elongation complex bound to inhibitor N-aroyl-N-aryl-phenylalanine amide (AAP)-SO2
Classification: TRANSCRIPTION, TRANSFERASE/INHIBITOR
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2025-01-08
Authors: Bosch, B., Lilic, M., Campbell, E.A.
PDB entry 9mrr: Cryo-EM structure of KwaA with C4 symmetry
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.28 Å
Deposited: 2025-01-08
Authors: Zhang, Z., Patel, D.J.
PDB entry 9mrs: Crystal structure of human MMACHC in complex with MMADHC and B12
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2025-01-08
Authors: Mascarenhas, R., Banerjee, R.
PDB entry 9mrt: Cryo-EM structure of the human TRPM4 channel in a calcium and PI(4,5)P2 bound open state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.44 Å
Deposited: 2025-01-08
Authors: Teixeira-Duarte, C.M., Jiang, Y.
PDB entry 9mru: Structural Asymmetry in SARS-CoV-2 Nsp15 Hexamer Important for Catalytic Activity
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-01-08
Authors: Ketawala, G.K., Sonowal, M., Schrag, L., Fromme, R., Botha, S., Fromme, P.
PDB entry 9mrv: Crystal structures of a cyanobacterial DAP epimerase bound to D,L-alpha-methyl DAP
Classification: ANTIBIOTIC
Source organism: Anabaena sp. YBS01
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2025-01-08
Authors: Chen, P., Lamer, T., Vederas, J.C., Lemieux, M.J.
PDB entry 9mrw: Functional Implications of Hexameric Dynamics in SARS-CoV-2 Nsp15
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-01-08
Authors: Ketawala, G.K., Sonowal, M., Schrag, L., Fromme, R., Botha, S., Fromme, P.
PDB entry 9mrx: Cryo-EM structure of KwaA-KwaB complex
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2025-01-08
Authors: Zhang, Z., Patel, D.J.
PDB entry 9mry: Functional Implications of HexamericDynamics in SARS-CoV-2 Nsp15
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-01-09
Authors: Ketawala, G.K., Sonowal, M., Schrag, L., Fromme, R., Botha, S., Fromme, P.
PDB entry 9mrz: Structure of HCV broadly neutralizing antibody RM1-73
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2025-01-09
Authors: Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.
PDB entry 9ms0: Structure of cord Blood MAIT A2 TCR in complex with human MR1-5-OP-RU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2025-01-09
Authors: Awad, W., Rossjohn, J.
PDB entry 9ms1: Crystal structure of human CYP3A4 in complex with SJYHJ-111
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2025-01-09
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.
PDB entry 9ms2: Crystal structure of human CYP3A5 in complex with SJYHJ-111
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-01-09
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.
PDB entry 9ms3: Crystal structure of Bmp7 in complex with 2,4-dibromophenol generated by substrate soaking
Classification: OXIDOREDUCTASE
Source organism: Marinomonas mediterranea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-01-09
Authors: Nolan, K., Wang, Y.
PDB entry 9ms4: Crystal structure of an expansin (Xa_EXLX1) from Xanthomonas sacchari
Classification: SUGAR BINDING PROTEIN
Source organism: Xanthomonas sacchari
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-01-09
Authors: Smith, C.A., Buchko, G.W., Momeni, M.H., Master, E.R.
PDB entry 9ms5: Crystal structure of an expansin (Ss_EXLX1) from Streptomyces sp.
Classification: SUGAR BINDING PROTEIN
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-01-09
Authors: Smith, C.A., Buchko, G.W., Momeni, M.H., Master, E.R.
PDB entry 9ms6: Crystal structure of a putative phage endolysin identified from a metagenomic survey of Prosser, Washington soil (PWe1)
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-01-09
Authors: Smith, C.A., Buchko, G.W., Wu, R., Cort, J.R.
PDB entry 9ms7: Crystal structure of a putative phage endolysin identified from a metagenomic survey of Prosser, Washington soil (PWe2)
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-01-09
Authors: Smith, C.A., Buchko, G.W., Wu, R., Cort, J.R.
PDB entry 9ms8: PTCH1 in complex with Fab6H3
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2025-01-09
Authors: Hu, Q., Qi, X., Li, X.
PDB entry 9ms9: Structure of HCV neutralizing antibody RM5-16
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2025-01-09
Authors: Nguyen, T.K.Y., Wilson, I.A.
PDB entry 9msa: Alpha-ketoisovalerate decarboxylase (Kivd) from Synechocystis sp. PCC 6803 with substitution S286T
Classification: LYASE
Source organism: Lactococcus lactis subsp. lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2025-01-09
Authors: Begum, A., Xie, H., Gunn, L.H.
PDB entry 9msc: Structure of Hepatitis C Virus Envelope Glycoprotein HCV-1 E2ecto from genotype 1a bound to neutralizing antibody RM5-16
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Hepatitis C virus (isolate 1); Homo sapiens; Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 3.39 Å
Deposited: 2025-01-09
Authors: Nguyen, T.K.Y., Stanfield, R.L., Wilson, I.A.
PDB entry 9msd: G002-293-0536 Fab in complex with 001428_T278M_L14 SOSIP and RM20A3 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-01-09
Authors: Phulera, S., Ozorowski, G., Ward, A.B.
PDB entry 9mse: de novo SigN RNA polymerase transcription initiation intermediate with pre-catalytic bEBP state (RPi1 open ring)
Classification: TRANSCRIPTION
Source organism: Aquifex aeolicus VF5; Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-01-09
Authors: Mueller, A.U., Darst, S.A.
PDB entry 9msf: de novo SigN RNA polymerase transcription initiation intermediate with post-catalytic bEBP state (RPi1 closed ring)
Classification: TRANSCRIPTION
Source organism: Aquifex aeolicus VF5; Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-01-09
Authors: Mueller, A.U., Darst, S.A.
PDB entry 9msg: De novo SigN RNA polymerase transcription initiation intermediate with bound SigN-RII
Classification: TRANSCRIPTION, TRANSFERASE/DNA
Source organism: Aquifex aeolicus VF5; Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-01-09
Authors: Mueller, A.U., Darst, S.A.
PDB entry 9msh: de novo SigN RNA polymerase open complex (RPo)
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-01-09
Authors: Mueller, A.U., Darst, S.A.
PDB entry 9msi: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 T18N
Classification: ANTIFREEZE PROTEIN
Source organism: Macrozoarces americanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 1999-01-24
Authors: Graether, S.P., Deluca, C.I., Baardsnes, J., Hill, G.A., Davies, P.L., Jia, Z.
PDB entry 9msj: de novo SigN RNA polymerase NTP-bound open complex (RPo+2A)
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-01-09
Authors: Mueller, A.U., Darst, S.A.
PDB entry 9msn: Crystal structure of MPXV A35R in complex with neutralizing antibody EV35-2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2025-01-10
Authors: Yuan, M., Zhu, X., Wilson, I.A.
PDB entry 9mso: Crystal structure of MPXV A35R in complex with neutralizing antibody EV35-6
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å
Deposited: 2025-01-10
Authors: Yuan, M., Zhu, X., Wilson, I.A.
PDB entry 9msp: Crystal structure of MPXV A35R in complex with neutralizing antibody EV35-7
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2025-01-10
Authors: Yuan, M., Wilson, I.A.
PDB entry 9msq: Candida albicans Hsp90 nucleotide binding domain in complex with HSP990
Classification: CHAPERONE/INHIBITOR
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2025-01-10
Authors: Kowalewski, M.E., Redinbo, M.R.
PDB entry 9msr: BDTX-1535 in complex with WT EGFR
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2025-01-10
Authors: Damghani, T., Heppner, D.E.
PDB entry 9mss: Limertinib in complex with WT EGFR
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2025-01-10
Authors: Damghani, T., Lin, K.S., Heppner, D.E.
PDB entry 9mst: Befotertinib in complex with WT EGFR
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2025-01-10
Authors: Damghani, T., Ouellette, E.A., Heppner, D.E.
PDB entry 9msu: Candida albicans Hsp90 nucleotide binding domain in complex with BX2819
Classification: CHAPERONE/INHIBITOR
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2025-01-10
Authors: Kowalewski, M.E., Redinbo, M.R.
PDB entry 9msv: Candida albicans Hsp90 nucleotide binding domain in complex with BEP800
Classification: CHAPERONE/INHIBITOR
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2025-01-10
Authors: Kowalewski, M.E., Redinbo, M.R.
PDB entry 9msx: Candida albicans Hsp90 nucleotide binding domain in complex with TAS116
Classification: CHAPERONE/INHIBITOR
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-01-10
Authors: Kowalewski, M.E., Redinbo, M.R.
PDB entry 9msy: G002-480-0546 Fab in complex with V703-0537_T278M_L14 SOSIP and BG18 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-01-10
Authors: Phulera, S., Ozorowski, G., Ward, A.B.
PDB entry 9msz: 1.1 A Crystal Structure of Housefly Cytochrome c at pH 9.7
Classification: ELECTRON TRANSPORT
Source organism: Musca domestica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2025-01-10
Authors: Zafreen, L., Huang, L.-S., Luemmen, P., Berry, E.A.
PDB entry 9mt0: 1.2 A Crystal Structure of Housefly cytochrome c at pH 11
Classification: ELECTRON TRANSPORT
Source organism: Musca domestica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2025-01-10
Authors: Zafreen, L., Huang, L.-S., Luemmen, P., Berry, E.A.
PDB entry 9mt1: 1.53 A Crystal Structure of Housefly cytochrome c at pH 6.5
Classification: ELECTRON TRANSPORT
Source organism: Musca domestica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.405 Å
Deposited: 2025-01-10
Authors: Zafreen, L., Huang, L.-S., Luemmen, P., Berry, E.A.
PDB entry 9mt2: Structure of the Machupo virus glycoprotein complex
Classification: VIRAL PROTEIN
Source organism: Mammarenavirus machupoense
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-01-10
Authors: Mann, C.J., Abraham, J.
PDB entry 9mt3: Candida albicans Hsp90 nucleotide binding domain in complex with XL888
Classification: CHAPERONE/INHIBITOR
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2025-01-10
Authors: Kowalewski, M.E., Redinbo, M.R.
PDB entry 9mt4: Connector structure of phage JohannRWettstein (Bas63)
Classification: VIRAL PROTEIN
Source organism: Escherichia phage JohannRWettstein
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-01-10
Authors: Hodgkinson-Bean, J.
PDB entry 9mt5: Helical tail assembly of phage JohannRWettstein (Bas63)
Classification: VIRAL PROTEIN
Source organism: Escherichia phage JohannRWettstein
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2025-01-10
Authors: Hodgkinson-Bean, J.
PDB entry 9mt6: Structure of the Junin virus glycoprotein complex
Classification: VIRAL PROTEIN
Source organism: Mammarenavirus juninense
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-10
Authors: Mann, C.J., Abraham, J.
PDB entry 9mt7: Cryo-EM Structure of the Magnesium Transporter MgtA in the E2 Conformation Bound to Mg2+
Classification: TRANSPORT PROTEIN
Source organism: Lactococcus lactis subsp. lactis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2025-01-10
Authors: Khan, M.B., Primeau, J.O., Basu, P.C., Morth, J.P., Lemieux, M.J., Young, H.S.
PDB entry 9mt8: Cryo-EM structure of the human TRPM4 channel in a calcium bound putative desensitized state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2025-01-10
Authors: Teixeira-Duarte, C.M., Jiang, Y.
PDB entry 9mt9: Candida albicans Hsp90 nucleotide binding domain in complex with BTB10184
Classification: CHAPERONE/INHIBITOR
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2025-01-10
Authors: Kowalewski, M.E., Redinbo, M.R.
PDB entry 9mta: Cryo-EM structure of the human TRPM4 channel in an apo closed state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2025-01-10
Authors: Teixeira-Duarte, C.M., Jiang, Y.
PDB entry 9mtb: Candida albicans Hsp90 nucleotide binding domain in complex with AMPPNP
Classification: CHAPERONE/INHIBITOR
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2025-01-10
Authors: Kowalewski, M.E., Redinbo, M.R.
PDB entry 9mtc: Cryo-EM structure of the human TRPM4 channel in a ATP bound inhibited state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2025-01-10
Authors: Teixeira-Duarte, C.M., Jiang, Y.
PDB entry 9mtd: [1T7-12] 3D DNA Double Crossover Motif with an Even Number of Half Turns between Junctions
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2025-01-11
Authors: Vecchioni, S., Woloszyn, K., Ohayon, Y.P., Sha, R., Horvath, A.
PDB entry 9mte: CryoEM structure of extracellular domain of human HER2 complexed with two nano-bodies 27A05 and 47D05
Classification: TRANSFERASE/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2025-01-11
Authors: Bruch, E.M., Rak, A.
PDB entry 9mtf: Structure of porcine Fab 14-1 in complex with influenza H1N1 A/Solomon Island/3/2006 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2025-01-11
Authors: Lv, H., Pholcharee, T., Wu, N.C.
PDB entry 9mtg: Structure of porcine Fab 14-2 in complex with influenza H1N1 A/Hawaii/70/2019 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2025-01-11
Authors: Lv, H., Pholcharee, T., Wu, N.C.
PDB entry 9mth: Structure of porcine Fab 14-8 in complex with influenza H1N1 A/Solomon Island/3/2006 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-01-11
Authors: Lv, H., Pholcharee, T., Wu, N.C.
PDB entry 9mti: Structure of porcine Fab 15-1 in complex with influenza H3N8 A/Mallard/Alberta/362/2017 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2025-01-11
Authors: Lv, H., Pholcharee, T., Wu, N.C.
PDB entry 9mtj: Structure of porcine Fab 15-5 in complex with influenza H1N1 A/Solomon Island/3/2006 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2025-01-11
Authors: Lv, H., Pholcharee, T., Wu, N.C.
PDB entry 9mtk: Structure of porcine Fab 24-1G17 in complex with influenza H1N1 A/Hawaii/70/2019 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2025-01-11
Authors: Lv, H., Pholcharee, T., Wu, N.C.
PDB entry 9mtl: Structure of porcine Fab 24-1G23 in complex with influenza H1N1 A/Hawaii/70/2019 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2025-01-11
Authors: Lv, H., Pholcharee, T., Wu, N.C.
PDB entry 9mtm: Structure of porcine Fab 24-1G28 in complex with influenza H1N1 A/Hawaii/70/2019 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2025-01-11
Authors: Lv, H., Pholcharee, T., Wu, N.C.
PDB entry 9mtn: Crystal structure of KwaB
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.92 Å
Deposited: 2025-01-11
Authors: Zhiying, Z., Dinshaw, J.P.
PDB entry 9mto: Crystal structure of acetyltransferase CBU0801 from Coxiella burnetii
Classification: TRANSFERASE
Source organism: Coxiella burnetii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2025-01-11
Authors: Stogios, P.J., Evdokimova, E., Chang, C., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9mtp: Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-01-12
Authors: Aleksandrova, E.V., Syroegin, E.A., Basu, R.S., Vassilevski, A.A., Gagnon, M.G., Polikanov, Y.S.
PDB entry 9mtq: Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2025-01-12
Authors: Aleksandrova, E.V., Syroegin, E.A., Basu, R.S., Vassilevski, A.A., Gagnon, M.G., Polikanov, Y.S.
PDB entry 9mtr: Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGS-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.80A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-01-12
Authors: Aleksandrova, E.V., Syroegin, E.A., Basu, R.S., Vassilevski, A.A., Gagnon, M.G., Polikanov, Y.S.
PDB entry 9mts: Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-01-12
Authors: Aleksandrova, E.V., Syroegin, E.A., Basu, R.S., Vassilevski, A.A., Gagnon, M.G., Polikanov, Y.S.
PDB entry 9mtt: Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site deacylated-tRNAcys at 2.60A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-01-12
Authors: Aleksandrova, E.V., Syroegin, E.A., Basu, R.S., Vassilevski, A.A., Gagnon, M.G., Polikanov, Y.S.
PDB entry 9mtu: Crystal structure of apo-ADC-1 beta-lactamase
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-01-12
Authors: Smith, C.A., Stewart, N.K., Vakulenko, S.B.
PDB entry 9mtv: Crystal structure of an apo-ADC-1 triple mutant
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-01-12
Authors: Smith, C.A., Stewart, N.K., Vakulenko, S.B.
PDB entry 9mtw: Crystal structure of ADC-1-ertapenem complex
Classification: HYDROLASE/INHIBITOR,ANTIBIOTIC
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-01-12
Authors: Smith, C.A., Stewart, N.K., Vakulenko, S.B.
PDB entry 9mtx: CryoEM structure of extracellular domain of human HER2 complexed with nano-bodies 29E09
Classification: TRANSFERASE
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2025-01-12
Authors: Bruch, E.M., Rak, A.
PDB entry 9mty: Structure of TIGR-TasR in complex with tigRNA and target DNA after DNA cleavage
Classification: DNA BINDING PROTEIN/RNA/DNA
Source organism: Thermoproteota archaeon; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2025-01-12
Authors: Wilkinson, M.E., Zhang, F.
PDB entry 9mtz: L6A variant of mini-alphaA crystallin
Classification: CHAPERONE
Experimental method: SOLUTION NMR
Deposited: 2025-01-13
Authors: Sroge, C.D., Zhu, J., Padilla, M.S.T.L., Martin, R.W.
PDB entry 9mu0: I4A variant of mini-alphaA crystallin
Classification: CHAPERONE
Experimental method: SOLUTION NMR
Deposited: 2025-01-13
Authors: Sroge, C.D., Zhu, J., Padilla, M.S.T.L., Martin, R.W.
PDB entry 9mu2: SaPI1 neck structure with DNA, tail completion protein, and tape measure protein
Classification: VIRUS LIKE PARTICLE
Source organism: Staphylococcus phage 80alpha
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2025-01-13
Authors: Kizziah, J.L., Dokland, T.
PDB entry 9mu3: SaPI1 neck structure
Classification: VIRUS LIKE PARTICLE
Source organism: Staphylococcus phage 80alpha
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2025-01-13
Authors: Kizziah, J.L., Dokland, T.
PDB entry 9mu4: Structure of a native Drosophila melanogaster octameric nucleosome
Classification: GENE REGULATION
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2025-01-13
Authors: Venette-Smith, N.L., Vishwakarma, R.K., Dollinger, R., Schultz, J., Venkatakrishnan, V., Babitzke, P., Anand, G., Gilmour, D.S., Armache, J.-P., Murakami, K.
PDB entry 9mu5: Structure of a native Drosophila melanogaster hexameric nucleosome
Classification: GENE REGULATION
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2025-01-13
Authors: Venette-Smith, N.L., Vishwakarma, R.K., Dollinger, R., Schultz, J., Venkatakrishnan, V., Babitzke, P., Anand, G., Gilmour, D.S., Armache, J.-P., Murakami, K.
PDB entry 9mu6: Structure of native Drosophila melanogaster DLST
Classification: GENE REGULATION
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2025-01-13
Authors: Venette-Smith, N.L., Vishwakarma, R.K., Dollinger, R., Schultz, J., Venkatakrishnan, V., Babitzke, P., Anand, G., Gilmour, D.S., Armache, J.-P., Murakami, K.
PDB entry 9mu7: Structure of a native Drosophila melanogaster Pol II Elongation Complex with a well-defined Rpb4/Rpb7 stalk
Classification: TRANSCRIPTION
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2025-01-13
Authors: Venette-Smith, N.L., Vishwakarma, R.K., Dollinger, R., Schultz, J., Venkatakrishnan, V., Babitzke, P., Anand, G., Gilmour, D.S., Armache, J.-P., Murakami, K.
PDB entry 9mu8: Structure of a native Drosophila melanogaster Pol II Elongation Complex without Rpb4/Rpb7 stalk
Classification: TRANSCRIPTION
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2025-01-13
Authors: Venette-Smith, N.L., Vishwakarma, R.K., Dollinger, R., Schultz, J., Venkatakrishnan, V., Babitzke, P., Anand, G., Gilmour, D.S., Armache, J.-P., Murakami, K.
PDB entry 9mu9: Structure of a native Drosophila melanogaster Nucleosome Elongation Complex (Pol II EC-nucleosome). Composite map
Classification: TRANSCRIPTION
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.8 Å
Deposited: 2025-01-13
Authors: Venette-Smith, N.L., Vishwakarma, R.K., Dollinger, R., Schultz, J., Venkatakrishnan, V., Babitzke, P., Anand, G., Gilmour, D.S., Armache, J.-P., Murakami, K.
PDB entry 9mua: 4OT-SnoaL from P. atlanticus - Apo form
Classification: UNKNOWN FUNCTION
Source organism: Pseudooceanicola atlanticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2025-01-13
Authors: Melkonian, T.R., Vuksanovic, N., Allen, K.N., Whitman, C.P.
PDB entry 9mub: Human IMPDH2 mutant - S160del, treated with GTP, ATP, IMP, and NAD+; tetramer reconstruction
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-01-13
Authors: O'Neill, A.G., Kollman, J.M.
PDB entry 9muc: Human IMPDH2 mutant - S160del, treated with GTP, ATP, IMP, and NAD+; interfacial octamer reconstruction
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2025-01-13
Authors: O'Neill, A.G., Kollman, J.M.
PDB entry 9mud: Cryo-EM structure of CRISPR-associated cA4 bound Cat1 Pentagonal filament assembly
Classification: ANTIVIRAL PROTEIN
Source organism: bacterium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-01-13
Authors: Majumder, P., Patel, D.J.
PDB entry 9mue: Cryo-EM structure of CRISPR-associated cA4 bound Cat1 Pentagonal filament assembly in the presence of NAD (ADPR modelled)
Classification: ANTIVIRAL PROTEIN
Source organism: bacterium
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2025-01-13
Authors: Majumder, P., Patel, D.J.
PDB entry 9muf: Cryo-EM structure of the IFI16-PYD filament
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-01-13
Authors: Garg, A., Niedzialkowska, E., Egelman, E.H., Sohn, J.
PDB entry 9mug: Structure of Schistosoma mansoni Hop1 chromatin binding region
Classification: DNA BINDING PROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-01-13
Authors: Rodriguez, A.R., Ye, Q., Nguyen, J., Chau, K., Corbett, K.D.
PDB entry 9muh: Mus musculus TASK-1 (KCNK3) in MSP1E3D1 lipid nanodisc at pH 6.0 and 100 mM KCl
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-01-13
Authors: Docter, T.A., Brohawn, S.G.
PDB entry 9mui: C. difficile RBD1 with Ca2+
Classification: TOXIN
Source organism: Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2025-01-14
Authors: Hunter, D., Pozharski, E.
PDB entry 9muj: RlmR 23S rRNA methyltransferase from Thermus thermophilus in complex with methylated rRNA (Um2552) and S-adenosyl-L-homocysteine (SAH)
Classification: TRANSFERASE/RNA
Source organism: Thermus thermophilus HB27; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.006 Å
Deposited: 2025-01-14
Authors: Tanouti, Y., Roovers, M., Droogmans, L., Van Elder, D., Kruys, V., Labar, G.
PDB entry 9muk: RlmR 23S rRNA methyltransferase from Thermus thermophilus
Classification: TRANSFERASE
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 1.973 Å
Deposited: 2025-01-14
Authors: Tanouti, Y., Roovers, M., Droogmans, L., Van Elder, D., Kruys, V., Labar, G.
PDB entry 9mul: Crystal structure of GluN1/GluN2A ligand-binding domain in complex with Compound 1, Glycine and Glutamate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-01-14
Authors: Shaffer, P.L., Duda, D.M.
PDB entry 9mum: Crystal structure of GluN1/GluN2A ligand-binding domain in complex with Compound 11, Glycine and Glutamate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2025-01-14
Authors: Shaffer, P.L., Duda, D.M.
PDB entry 9mun: Structure of Human SLC33A1 in complex with oxidized glutathione
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2025-01-14
Authors: Gad, M., Hite, R.K.
PDB entry 9muo: Cryo-EM structure of CRISPR-associated cA4 bound Cat1 Pentagonal filament assembly in the presence of NAD analog BAD
Classification: ANTIVIRAL PROTEIN
Source organism: bacterium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-01-14
Authors: Majumder, P., Patel, D.J.
PDB entry 9mup: 4OT-SnoaL from P. atlanticus - 3-bromopropiolate treated
Classification: UNKNOWN FUNCTION
Source organism: Pseudooceanicola atlanticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2025-01-14
Authors: Melkonian, T.R., Vuksanovic, N., Allen, K.N., Whitman, C.P.
PDB entry 9muq: Crystal structure of unbound N-SH2 domain of SHP2 (1AYD conditions)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-01-14
Authors: Padua, R.A.P., Glaser, A., Ojoawo, A., Kern, D.
PDB entry 9mur: Cryo-EM structure of Rubisco from Arabidopsis thaliana with the 2B small subunit isoform
Classification: PHOTOSYNTHESIS
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2025-01-14
Authors: Ceminsky, M., Askey, B., Gunn, L.H.
PDB entry 9mus: Reduced state of a turn-off thiol-disulfide redox biosensor with a fluorescence-lifetime readout
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-01-14
Authors: Rosen, P., Yellen, G., Lim, D.C.
PDB entry 9mut: Reduced state of a turn-on thiol-disulfide redox biosensor with a fluorescence-lifetime readout
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-01-14
Authors: Rosen, P., Yellen, G., Lim, D.C.
PDB entry 9muu: Oxidized state of a turn-off thiol-disulfide redox biosensor with a fluorescence-lifetime readout
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-01-14
Authors: Rosen, P., Yellen, G., Lim, D.C.
PDB entry 9muv: Oxidized state of a turn-on thiol-disulfide redox biosensor with a fluorescence-lifetime readout
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-01-14
Authors: Rosen, P., Yellen, G., Lim, D.C.
PDB entry 9muw: Cryo-EM structure of a truncated Nipah virus (Malaysia Strain) L:P complex
Classification: TRANSFERASE
Source organism: Henipavirus nipahense
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2025-01-14
Authors: Chen, Z.H., Liang, B.
PDB entry 9mux: Structure of UBR1-RWA complex
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2025-01-14
Authors: Huang, S., Wu, J., Taylor, S., Chen, Y.
PDB entry 9mv0: Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Classification: VIRAL PROTEIN
Source organism: Pipistrellus abramus; Pipistrellus bat coronavirus HKU5
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2025-01-15
Authors: Li, N., Tsybovsky, Y., Teng, I., Zhou, T.
PDB entry 9mva: Mycobacterium abscessus Eis2 in complex with Non-hydrolyzable CoenzymeA
Classification: ANTIBIOTIC
Source organism: Mycobacteroides abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-01-15
Authors: Jayasinghe, T.D., Coker, A.L., Rajendra, T., Miller, D., Lee, R.E.
PDB entry 9mvg: Structure of SciW variant L66A bound to the Rhs1 transmembrane domain
Classification: CHAPERONE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2025-01-15
Authors: Van Schepdael, M.A., Prehna, G.
PDB entry 9mvk: Co-crystal structure of feline coronavirus UU23 main protease with nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Feline coronavirus UU23
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2025-01-15
Authors: Shaqra, A.M., Maryam, A., Schiffer, C.A.
PDB entry 9mvl: Co-crystal structure of feline coronavirus UU23 main protease with GC376
Classification: VIRAL PROTEIN
Source organism: Feline coronavirus UU23
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-01-15
Authors: Shaqra, A.M., Maryam, A., Schiffer, C.A.
PDB entry 9mvm: Crystal Structure of SARS-CoV-2 Main Protease (Mpro)in Complex with Inhibitor AVI-3318
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2025-01-15
Authors: Diallo, A., Gumpena, R., Verba, K.
PDB entry 9mvo: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) in Complex with Inhibitor AVI-4692
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2025-01-15
Authors: Diallo, A., Gumpena, R., Verba, K.
PDB entry 9mvp: Crystal Structure of SARS-CoV-2 Main Protease (Mpro)in Complex with Inhibitor AVI-4516
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-01-15
Authors: Diallo, A., Gumpena, R., Verba, K.
PDB entry 9mvq: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) variant Q192T in Complex with Inhibitor AVI-4303
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2025-01-15
Authors: Diallo, A., Gumpena, R., Partridge, J., Verba, K.
PDB entry 9mvr: AI-designed Cas13 anti-CRISPR AIcrVIA1
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2025-01-15
Authors: Taveneau, C., Chai, H.X., Knott, G.J.
PDB entry 9mvs: Activated Leptotrichia buccalis (Lbu) CRISPR-Cas13a bound to AI-designed anti-CRISPR AIcrVIA1
Classification: DE NOVO PROTEIN/HYDROLASE/RNA
Source organism: Leptotrichia buccalis; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2025-01-15
Authors: Taveneau, C., Knott, G.J.
PDB entry 9mvt: Pfs230 domains 1-8 of the endogenous Pfs230-Pfs48/45 complex
Classification: PROTEIN BINDING
Source organism: Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.86 Å
Deposited: 2025-01-16
Authors: Dietrich, M.H., Glukhova, A., Shakeel, S., Tham, W.H.
PDB entry 9mvu: C6 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Human herpesvirus 1 (strain 17)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-01-16
Authors: Viadiu, H., Abernathy, E., Lee, C.V., Hung, M., Yu, Y., Xing, W., Yu, X.
PDB entry 9mvv: Pfs230 (D9-D14) with Pfs48/45 of the endogenous Pfs230-Pfs48/45 complex
Classification: PROTEIN BINDING
Source organism: Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2025-01-16
Authors: Dietrich, M.H., Glukhova, A., Shakeel, S., Tham, W.H.
PDB entry 9mvw: Crystal structure of S101F calmodulin - CaM:RM20 analog complex
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2025-01-16
Authors: Brunzelle, J.S., Shuvalova, L., Watterson, D.M.
PDB entry 9mvx: Crystal structure of knob-in-hole immunoglobulin G1 Fc heterodimer with P374A
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2025-01-16
Authors: Choi, W.S., Tilegenova, C., Are, M., Zwolak, A., Shaffer, P., Sharma, S.
PDB entry 9mvy: Crystal structure of ZMET2 in complex with unmethylated CTG DNA and a histone H3Kc9me2 peptide
Classification: TRANSFERASE
Source organism: Zea mays; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2025-01-16
Authors: Herle, G., Fang, J., Song, J.
PDB entry 9mvz: Tripartite complex of MmpL5-S5-AcpM from Mycolicibacterium smegmatis
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2025-01-16
Authors: Zhang, Z., Maharjan, R., Gregor, W.
PDB entry 9mw0: Bipartite complex of MmpL5-AcpM from Mycolicibacterium smegmatis
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2025-01-16
Authors: Zhang, Z., Maharjan, R., Gregor, W.
PDB entry 9mw1: Structure of SARM1 TIR domain bound to G8758
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-01-16
Authors: Wallweber, H.A., Sudhamsu, J.
PDB entry 9mw2: Structure of SARM1 TIR domain bound to G6831
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-01-16
Authors: Wallweber, H.A., Sudhamsu, J.
PDB entry 9mw3: Structure of SARM1 TIR domain bound to G2756
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2025-01-16
Authors: Wallweber, H.A., Sudhamsu, J.
PDB entry 9mw4: Co-crystal structure of feline coronavirus UU23 main protease with Pfizer intravenous compound PF-00835231
Classification: VIRAL PROTEIN
Source organism: Feline alphacoronavirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-01-16
Authors: Shaqra, A.M., Maryam, A., Schiffer, C.A.
PDB entry 9mw5: D1 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2025-01-16
Authors: Viadiu, H., Abernathy, E., Lee, C.V., Hung, M., Yu, Y., Xing, W., Yu, X.
PDB entry 9mw6: Cryo-EM structure of ancestral Dicer helicase bound to 27-bp dsRNA
Classification: ANTIVIRAL PROTEIN/RNA
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-01-16
Authors: Aderounmu, A.M., Consalvo, C.D., Shen, P.S., Bass, B.L.
PDB entry 9mw7: Cryo-EM structure of ancestral Dicer helicase bound to 27-bp dsRNA in end-bound transition state
Classification: ANTIVIRAL PROTEIN/RNA
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-01-16
Authors: Aderounmu, A.M., Consalvo, C.D., Shen, P.S., Bass, B.L.
PDB entry 9mw8: Cryo-EM structure of ancestral Dicer helicase bound to 27-bp dsRNA in post-hydrolysis closed state
Classification: ANTIVIRAL PROTEIN/RNA
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-01-17
Authors: Aderounmu, A.M., Consalvo, C.D., Shen, P.S., Bass, B.L.
PDB entry 9mw9: Cryo-EM structure of CRISPR-associated cA4 bound Cat1 Trigonal filament assembly
Classification: ANTIVIRAL PROTEIN
Source organism: bacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-17
Authors: Majumder, P., Patel, D.J.
PDB entry 9mwa: Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain bound with N-(4-(2-((3-(thiophene-2-carboximidamido)benzyl)amino)ethyl)phenyl)thiophene-2-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwb: Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain bound with N-(4-(2-((3-(furan-2-carboximidamido)benzyl)amino)ethyl)phenyl)furan-2-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.993 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwc: Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain bound with N-(3-(((2-(3-(aminomethyl)-[1,1'-biphenyl]-4-yl)ethyl)amino)methyl)phenyl)furan-2-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwd: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(4-(2-((3-(furan-2-carboximidamido)benzyl)amino)ethyl)phenyl)furan-2-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwe: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(4-(2-((3-(furan-3-carboximidamido)benzyl)amino)ethyl)phenyl)furan-3-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwf: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(4-(2-((3-(isoxazole-3-carboximidamido)benzyl)amino)ethyl)phenyl)isoxazole-3-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwg: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(4-(2-((3-(thiazole-2-carboximidamido)benzyl)amino)ethyl)phenyl)thiazole-2-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwh: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(4-(2-((3-(thiazole-5-carboximidamido)benzyl)amino)ethyl)phenyl)thiazole-5-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.958 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwi: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(3-(2-((3-(thiazole-5-carboximidamido)benzyl)amino)ethyl)phenyl)thiazole-5-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.054 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwj: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(3-(2-((3-(furan-2-carboximidamido)benzyl)amino)ethyl)phenyl)furan-2-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwk: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(3-(2-((3-(furan-2-carboximidamido)benzyl)amino)ethyl)phenyl)furan-2-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.997 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwl: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(3-(((2-(3-(aminomethyl)-[1,1'-biphenyl]-4-yl)ethyl)amino)methyl)phenyl)thiophene-2-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwm: Structure of rat neuronal nitric oxide synthase R349A mutant heme domain bound with N-(3-(((2-(3-(aminomethyl)-[1,1'-biphenyl]-4-yl)ethyl)amino)methyl)phenyl)thiazole-5-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.
PDB entry 9mwn: Structure of human endothelial nitric oxide synthase heme domain bound with N-(4-(2-((3-(thiophene-2-carboximidamido)benzyl)amino)ethyl)phenyl)thiophene-2-carboximidamide
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-01-17
Authors: Li, H., Poulos, T.L.