LiteFold/PDB huggingface dataset:
PDB entry 3keb: Thiol peroxidase from Chromobacterium violaceum
Classification: OXIDOREDUCTASE
Source organism: Chromobacterium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-10-25
Authors: Osipiuk, J., Kagan, O., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3kec: Crystal Structure of Human MMP-13 complexed with a phenyl-2H-tetrazole compound
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-10-25
Authors: Shieh, H.-S., Pavlovsky, A.G., Collins, B., Schnute, M.E.
PDB entry 3ked: Crystal structure of Aminopeptidase N in complex with 2,4-diaminobutyric acid
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-10-25
Authors: Addlagatta, A., Gumpena, R.
PDB entry 3kee: HCV NS3/NS4A complexed with Non-covalent macrocyclic compound TMC435
Classification: HYDROLASE
Source organism: Hepatitis C virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-26
Authors: Lindberg, J.D., Nystrom, S., Cummings, M.D.
PDB entry 3kef: Crystal structure of IspH:DMAPP-complex
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-10-26
Authors: Groll, M., Graewert, T., Span, I., Eisenreich, W., Bacher, A.
PDB entry 3keg: X-ray Crystallographic Structure of a Y131F mutant of Pseudomonas Aeruginosa Azoreductase in complex with Methyl RED
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-26
Authors: Wang, C.-J., Laurieri, N., Abuhammad, A., Lowe, E., Westwood, I., Ryan, A., Sim, E.
PDB entry 3keh: Crystal Structure of N370S Glucocerebrosidase mutant at pH 7.4
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-10-26
Authors: Wei, R.R., Boucher, S., Pan, C.Q., Edmunds, T.
PDB entry 3kei: Crystal Structure of the GluA4 Ligand-Binding domain L651V mutant in complex with glutamate
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-10-26
Authors: Gill, A., Madden, D.R.
PDB entry 3kej: Crystal Structure of Human MMP-13 complexed with a (pyridin-4-yl)-2H-tetrazole compound
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-10-26
Authors: Shieh, H.-S., Collins, B., Schnute, M.E.
PDB entry 3kek: Crystal Structure of Human MMP-13 complexed with a (pyridin-4-yl)-2H-tetrazole compound
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2009-10-26
Authors: Shieh, H.-S., Collins, B., Schnute, M.E.
PDB entry 3kel: Crystal Structure of IspH:PP complex
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-10-26
Authors: Groll, M., Graewert, T., Span, I., Eisenreich, W., Bacher, A.
PDB entry 3kem: Crystal structure of IspH:IPP complex
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-26
Authors: Groll, M., Graewert, T., Span, I., Eisenreich, W., Bacher, A.
PDB entry 3ken: Human Eg5 in complex with S-trityl-L-cysteine
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-10-26
Authors: Parke, C.L., Wojcik, E.J., Kim, S., Worthylake, D.K.
PDB entry 3keo: Crystal Structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae complexed with NAD+
Classification: TRANSCRIPTION
Source organism: Streptococcus agalactiae serogroup III
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-10-26
Authors: Thiyagarajan, S., Logan, D., von Wachenfeldt, C.
PDB entry 3kep: Crystal structure of the autoproteolytic domain from the nuclear pore complex component NUP145 from Saccharomyces cerevisiae
Classification: PROTEIN TRANSPORT, RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2009-10-26
Authors: Sampathkumar, P., Ozyurt, S.A., Do, J., Bain, K., Dickey, M., Gheyi, T., Sali, A., Kim, S.J., Phillips, J., Pieper, U., Fernandez-Martinez, J., Franke, J.D., Atwell, S., Thompson, D.A., Emtage, J.S., Wasserman, S., Rout, M., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3keq: Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae complexed with NAD+
Classification: TRANSCRIPTION
Source organism: Streptococcus agalactiae serogroup III
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-26
Authors: Thiyagarajan, S., Logan, D., von Wachenfeldt, C.
PDB entry 3ker: D-Dopachrome tautomerase (D-DT)/ macrophage migration inhibitory factor 2 (MIF2) complexed with inhibitor 4-IPP
Classification: CYTOKINE/INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2009-10-26
Authors: Zierow, S., Lolis, E.
PDB entry 3kes: Crystal structure of the autoproteolytic domain from the nuclear pore complex component NUP145 from Saccharomyces cerevisiae in the Hexagonal, P61 space group
Classification: PROTEIN TRANSPORT, RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-26
Authors: Sampathkumar, P., Ozyurt, S.A., Do, J., Bain, K., Dickey, M., Gheyi, T., Sali, A., Kim, S.J., Phillips, J., Pieper, U., Fernandez-Martinez, J., Franke, J.D., Atwell, S., Thompson, D.A., Emtage, J.S., Wasserman, S., Rout, M., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ket: Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae bound to a palindromic operator
Classification: Transcription/DNA
Source organism: Streptococcus agalactiae serogroup III; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-26
Authors: Thiyagarajan, S., Logan, D., von Wachenfeldt, C.
PDB entry 3keu: Crystal Structure of Human PL Kinase with bound PLP and ATP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-26
Authors: Safo, M.K., Gandhi, A.K., Musayev, F.N.
PDB entry 3kev: X-ray crystal structure of a DCUN1 domain-containing protein from Galdieria sulfuraria
Classification: structural genomics, unknown function
Source organism: Galdieria sulphuraria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-10-26
Authors: Burgie, E.S., Bingman, C.A., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 3kew: Crystal structure of probable alanyl-trna-synthase from Clostridium perfringens
Classification: TRANSFERASE
Source organism: Clostridium perfringens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-26
Authors: Patskovsky, Y., Toro, R., Gilmore, M., Miller, S., Sauder, J.M., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3kex: Crystal structure of the catalytically inactive kinase domain of the human epidermal growth factor receptor 3 (HER3)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.797 Å
Deposited: 2009-10-26
Authors: Jura, N., Shan, Y., Cao, X., Shaw, D.E., Kuriyan, J.
PDB entry 3key: Crystal structure of S. cerevisiae Stn1 C-terminal
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-26
Authors: Sun, J., Yu, E.Y., Yang, Y.T., Confer, L.A., Sun, S.H., Wan, K., Lue, N.F., Lei, M.
PDB entry 3kez: Crystal structure of Putative sugar binding protein (YP_001299726.1) from Bacteroides vulgatus ATCC 8482 at 1.90 A resolution
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides vulgatus ATCC 8482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-10-26
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kf0: HIV Protease with fragment 4D9 bound
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-10-27
Authors: Stout, C.D., Perryman, A.L.
PDB entry 3kf2: The HCV NS3/NS4A protease apo structure
Classification: HYDROLASE
Source organism: Hepatitis C virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-10-27
Authors: Lindberg, J.D., Nystrom, S., Cummings, M.D.
PDB entry 3kf3: Structure of fructofuranosidase from Schwanniomyces occidentalis complexed with fructose
Classification: HYDROLASE
Source organism: Schwanniomyces occidentalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-10-27
Authors: Sanz-Aparicio, J., Polo, A.
PDB entry 3kf4: Structural analysis of DFG-in and DFG-out dual Src-Abl inhibitors sharing a common vinyl purine template
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-10-27
Authors: Zhou, T.
PDB entry 3kf5: Structure of invertase from Schwanniomyces occidentalis
Classification: HYDROLASE
Source organism: Schwanniomyces occidentalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-10-27
Authors: Sanz-Aparicio, J., Polo, A.
PDB entry 3kf6: Crystal structure of S. pombe Stn1-ten1 complex
Classification: STRUCTURAL PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-10-27
Authors: Sun, J., Yu, E.Y., Yang, Y.T., Confer, L.A., Sun, S.H., Wan, K., Lue, N.F., Lei, M.
PDB entry 3kf7: Crystal Structure of Human p38alpha Complexed With a Triazolopyrimidine compound
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-27
Authors: Shieh, H.-S., Williams, J.M., Stegeman, R.A., Xing, L., Jerome, K.D.
PDB entry 3kf8: Crystal structure of C. tropicalis Stn1-ten1 complex
Classification: STRUCTURAL PROTEIN
Source organism: Candida tropicalis MYA-3404
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-27
Authors: Sun, J., Yu, E.Y., Yang, Y.T., Confer, L.A., Sun, S.H., Wan, K., Lue, N.F., Lei, M.
PDB entry 3kf9: Crystal structure of the SdCen/skMLCK complex
Classification: CELL CYCLE/CALCIUM-BINDING PROTEIN
Source organism: Scherffelia dubia; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-10-27
Authors: Radu, L., Assairi, L., Blouquit, Y., Durand, D., Miron, S., Charbonnier, J.B., Craescu, C.T.
PDB entry 3kfa: Structural analysis of DFG-in and DFG-out dual Src-Abl inhibitors sharing a common vinyl purine template
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2009-10-27
Authors: Zhou, T.
PDB entry 3kfb: Crystal structure of a group II chaperonin from Methanococcus maripaludis
Classification: CHAPERONE
Source organism: Methanococcus maripaludis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-10-27
Authors: Pereira, J.H., Ralston, C.Y., Douglas, N., Meyer, D., Knee, K.M., Goulet, D.R., King, J.A., Frydman, J., Adams, P.D.
PDB entry 3kfc: Complex Structure of LXR with an agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-27
Authors: Olland, A., Bernotas, R.C., Unwalla, R.
PDB entry 3kfd: Ternary complex of TGF-b1 reveals isoform-specific ligand recognition and receptor recruitment in the superfamily
Classification: CYTOKINE/CYTOKINE RECEPTOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.995 Å
Deposited: 2009-10-27
Authors: Radaev, S., Sun, P.D.
PDB entry 3kfe: Crystal structures of a group II chaperonin from Methanococcus maripaludis
Classification: CHAPERONE
Source organism: Methanococcus maripaludis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2009-10-27
Authors: Pereira, J.H., Ralston, C.Y., Douglas, N., Meyer, D., Knee, K.M., Goulet, D.R., King, J.A., Frydman, J., Adams, P.D.
PDB entry 3kff: Major mouse urinary protein IV complexed with 2-sec-butyl-4,5-dihydrothiazole
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2009-10-27
Authors: Perez-Miller, S., Zou, Q., Hurley, T.D.
PDB entry 3kfg: Major mouse urinary protein IV complexed with 2-heptanone
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2009-10-27
Authors: Perez-Miller, S., Zou, Q., Hurley, T.D.
PDB entry 3kfh: Major mouse urinary protein IV complexed with 2-ethylhexanol
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2009-10-27
Authors: Perez-Miller, S., Zou, Q., Hurley, T.D.
PDB entry 3kfi: Major mouse urinary protein IV complexed with 2,5-dimethylpyrazine
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2009-10-27
Authors: Perez-Miller, S., Zou, Q., Hurley, T.D.
PDB entry 3kfj: Crystal Structure of the Grb2 SH2 Domain in Complex with a Flexible Ac-pY-E-N-NH2 Tripeptide Mimic
Classification: SIGNALING PROTEIN/PEPTIDE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2009-10-27
Authors: Clements, J.H.
PDB entry 3kfk: Crystal structures of a group II chaperonin from Methanococcus maripaludis
Classification: CHAPERONE
Source organism: Methanococcus maripaludis
Experimental method: X-RAY DIFFRACTION
Resolution: 6.003 Å
Deposited: 2009-10-27
Authors: Pereira, J.H., Ralston, C.Y., Douglas, N., Meyer, D., Knee, K.M., Goulet, D.R., King, J.A., Frydman, J., Adams, P.D.
PDB entry 3kfl: Leishmania major methionyl-tRNA synthetase in complex with methionyladenylate and pyrophosphate
Classification: LIGASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-27
Authors: Larson, E.T., Merritt, E.A., Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
PDB entry 3kfm: Crystal Structure of the GluA4 Ligand-Binding domain L651V mutant in complex with kainate
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-10-27
Authors: Gill, A., Madden, D.R.
PDB entry 3kfn: HIV Protease (PR) with inhibitor TL-3 and fragment hit 4D9 by soaking
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2009-10-27
Authors: Stout, C.D.
PDB entry 3kfo: Crystal structure of the C-terminal domain from the nuclear pore complex component NUP133 from Saccharomyces cerevisiae
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-10-27
Authors: Sampathkumar, P., Bonanno, J.B., Miller, S., Bain, K., Dickey, M., Gheyi, T., Almo, S.C., Rout, M., Sali, A., Phillips, J., Pieper, U., Fernandez-Martinez, J., Franke, J.D., Atwell, S., Thompson, D.A., Emtage, J.S., Wasserman, S., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3kfp: HIV Protease (PR) with inhibitor TL-3 bound, and DMSOs in exo site
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2009-10-27
Authors: Stout, C.D.
PDB entry 3kfq: Unreduced cathepsin V in complex with stefin A
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2009-10-27
Authors: Renko, M., Turk, D.
PDB entry 3kfr: HIV Protease (PR) dimer with inhibitor TL-3 bound and fragment 1F1 in the outside/top of flap
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-10-27
Authors: Stout, C.D.
PDB entry 3kfs: HIV Protease (PR) dimer with inhibitor TL-3 bound and fragment 2F4 in the outside/top of flap
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-10-28
Authors: Stout, C.D.
PDB entry 3kft: Crystal structure of Pentaerythritol Tetranitrate Reductase complex with 1,4,5,6-tetrahydro NADH
Classification: OXIDOREDUCTASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-28
Authors: Pudney, C.R., Levy, C.W., Leys, D., Scrutton, N.S.
PDB entry 3kfu: Crystal structure of the transamidosome
Classification: LIGASE/RNA
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-10-28
Authors: Blaise, M., Bailly, M., Frechin, M., Thirup, S., Becker, H.D., Kern, D.
PDB entry 3kfv: Crystal structure of the SH3-kinase fragment of tight junction protein 3 (TJP3) in apo-form
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-10-28
Authors: Tong, Y., Nedyalkova, L., Tempel, W., Zhong, N., Guan, X., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3kfw: Uncharacterized protein Rv0674 from Mycobacterium tuberculosis
Classification: Structural Genomics, Unknown function
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-10-28
Authors: Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3kfx: Human dCK complex with 5-Me dC and ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2009-10-28
Authors: Hazra, S., Lavie, A.
PDB entry 3kfy: Dynamic switching and partial occupancies of a small molecule inhibitor complex of DHFR
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2009-10-28
Authors: Collins, E.J., Lee, A.L., Carroll, M.J., Gromova, A.V., Miller, K.R., Singleton, S.F.
PDB entry 3kg0: Crystal structure of SnoaB, a cofactor-independent oxygenase from Streptomyces nogalater, determined to 1.7 resolution
Classification: OXIDOREDUCTASE
Source organism: Streptomyces nogalater
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-10-28
Authors: Koskiniemi, H., Grocholski, T., Lindqvist, Y., Mantsala, P., Niemi, J., Schneider, G.
PDB entry 3kg1: Crystal structure of SnoaB, a cofactor-independent oxygenase from Streptomyces nogalater, mutant N63A
Classification: OXIDOREDUCTASE
Source organism: Streptomyces nogalater
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-10-28
Authors: Koskiniemi, H., Grocholski, T., Lindqvist, Y., Mantsala, P., Niemi, J., Schneider, G.
PDB entry 3kg2: AMPA subtype ionotropic glutamate receptor in complex with competitive antagonist ZK 200775
Classification: membrane protein, transport protein
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2009-10-28
Authors: Sobolevsky, A.I., Rosconi, M.P., Gouaux, E.
PDB entry 3kg4: Crystal structure of an uncharacterized protein from Mannheimia succiniciproducens
Classification: Structural Genomics, Unknown function
Source organism: Mannheimia succiniciproducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-10-28
Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Lau, C., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3kg5: Crystal structure of human Ig-beta homodimer
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-10-28
Authors: Radaev, S., Sun, P.D.
PDB entry 3kg6: Dehydratase domain from CurF module of Curacin polyketide synthase
Classification: LYASE
Source organism: Lyngbya majuscula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-10-28
Authors: Akey, D.L., Smith, J.L.
PDB entry 3kg7: Dehydratase domain from CurH module of Curacin polyketide synthase
Classification: LYASE
Source organism: Lyngbya majuscula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2009-10-28
Authors: Akey, D.L., Smith, J.L.
PDB entry 3kg8: Dehydratase domain from CurJ module of Curacin polyketide synthase
Classification: LYASE
Source organism: Lyngbya majuscula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2009-10-28
Authors: Akey, D.L., Smith, J.L.
PDB entry 3kg9: Dehydratase domain from CurK module of Curacin polyketide synthase
Classification: LYASE
Source organism: Lyngbya majuscula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-10-28
Authors: Akey, D.L., Smith, J.L.
PDB entry 3kga: Crystal structure of MAPKAP kinase 2 (MK2) complexed with a potent 3-aminopyrazole ATP site inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2009-10-28
Authors: Kroemer, M., Velcicky, J., Izaac, A., Be, C., Huppertz, C., Pflieger, D., Schlapbach, A., Scheufler, C.
PDB entry 3kgb: Crystal structure of thymidylate synthase 1/2 from Encephalitozoon cuniculi at 2.2 A resolution
Classification: TRANSFERASE
Source organism: Encephalitozoon cuniculi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-10-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3kgc: Isolated ligand binding domain dimer of GluA2 ionotropic glutamate receptor in complex with glutamate, LY 404187 and ZK 200775
Classification: Membrane protein, transport protein
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-10-28
Authors: Sobolevsky, A.I., Rosconi, M.P., Gouaux, E.
PDB entry 3kgd: Crystal structure of E. coli RNA 3' cyclase
Classification: LIGASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2009-10-28
Authors: Shuman, S., Tanaka, N., Smith, P.
PDB entry 3kgf: The structure of 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis complexed with phenylalanine and tryptophan
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-29
Authors: Parker, E.J., Jameson, G.B., Jiao, W., Webby, C.J., Baker, E.N., Baker, H.M., Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)
PDB entry 3kgg: X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction
Classification: HYDROLASE
Source organism: Loligo vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-29
Authors: Blum, M.-M., Tomanicek, S.J., John, H., Hanson, B.L., terjans, H.R., Schoenborn, B.P., Langan, P., Chen, J.C.-H.
PDB entry 3kgk: Crystal structure of ArsD
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-10-29
Authors: Ye, J., Rosen, B.P.
PDB entry 3kgl: Crystal structure of procruciferin, 11S globulin from Brassica napus
Classification: PLANT PROTEIN
Source organism: Brassica napus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.981 Å
Deposited: 2009-10-29
Authors: Tandang-Silvas, M.R., Mikami, B., Maruyama, N., Utsumi, S.
PDB entry 3kgp: Crystal Structures of Urokinase-type Plasminogen Activator in Complex with 4-(Aminomethyl) Benzoic Acid and 4-(Aminomethyl-phenyl)-methanol
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-10-29
Authors: Jiang, L.-G., Zhao, G.-X., Bian, X.-B., Yuan, C., Huang, Z.-X., Huang, M.-D.
PDB entry 3kgq: Carboxypeptidase A liganded to an organic small-molecule: conformational changes
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-10-29
Authors: Fernandez, D., Boix, E., Pallares, I., Aviles, F.X., Vendrell, J.
PDB entry 3kgr: Crystal structure of the human leukocyte-associated Ig-like receptor-1 (LAIR-1)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-10-29
Authors: Brondijk, T.H.C., Huizinga, E.G., Ballering, J.
PDB entry 3kgs: V30M mutant human transthyretin (TTR) (apoV30M) pH 7.5
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-10-29
Authors: Trivella, D.B., Polikarpov, I.
PDB entry 3kgt: V30M mutant human transthyretin (TTR) complexed with genistein (V30M:GEN) pH 7.5
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-10-29
Authors: Trivella, D.B., Polikarpov, I.
PDB entry 3kgu: Wild type human transthyretin (TTR) complexed with genistein (TTRwt:GEN) pH 7.5
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-10-29
Authors: Trivella, D.B., Polikarpov, I.
PDB entry 3kgv: Crystal Structure of Human DNA-dependent Protein Kinase Catalytic Subunit (DNA-PKcs)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 6.6 Å
Deposited: 2009-10-29
Authors: Sibanda, B.L., Chirgadze, D.Y., Blundell, T.L.
PDB entry 3kgw: Crystal structure of Putative aminotransferase (AAH25799.1) from MUS MUSCULUS at 1.65 A resolution
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-10-29
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kgx: Crystal structure of Putative aminotransferase (AAH25799.1) from MUS MUSCULUS at 1.80 A resolution
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-10-29
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kgy: Crystal structure of Putative dihydrofolate reductase (YP_001636057.1) from CHLOROFLEXUS AURANTIACUS J-10-FL at 1.50 A resolution
Classification: OXIDOREDUCTASE
Source organism: Chloroflexus aurantiacus J-10-fl
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-10-29
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kgz: Crystal structure of a cupin 2 conserved barrel domain protein from Rhodopseudomonas palustris
Classification: Structural Genomics, Unknown function
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-10-29
Authors: Bonanno, J.B., Freeman, J., Bain, K.T., Do, J., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3kh0: Crystal structure of the Ras-association (RA) domain of RALGDS
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-29
Authors: Shen, Y., Tempel, W., Wang, H., Tong, Y., Guan, X., Crombet, L., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3kh1: Crystal structure of Predicted metal-dependent phosphohydrolase (ZP_00055740.2) from Magnetospirillum magnetotacticum MS-1 at 1.37 A resolution
Classification: HYDROLASE
Source organism: Magnetospirillum magnetotacticum MS-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2009-10-29
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kh2: Crystal structure of the P1 bacteriophage Doc toxin (F68S) in complex with the Phd antitoxin (L17M/V39A). Northeast Structural Genomics targets ER385-ER386
Classification: TOXIN
Source organism: Bacteriophage P1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2009-10-29
Authors: Arbing, M.A., Kuzin, A.P., Su, M., Abashidze, M., Verdon, G., Liu, M., Xiao, R., Acton, T., Inouye, M., Montelione, G.T., Woychik, N.A., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3kh3: Crystal structure of human Cu/Zn superoxide dismutase recombinantly produced in Leishmania tarantolae; P212121 crystal form containing 12 chains in the asymmetric unit
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2009-10-30
Authors: Gazdag, E.M., Blankenfeldt, W.
PDB entry 3kh4: Crystal structure of human Cu/Zn superoxide dismutase recombinantly produced in Leishmania tarantolae; P6522 crystal form containing 6 chains in the asymmetric unit
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2009-10-30
Authors: Gazdag, E.M., Blankenfeldt, W.
PDB entry 3kh5: Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.
Classification: UNKNOWN FUNCTION
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-30
Authors: Gomez Garcia, I., Oyenarte, I., Martinez-Cruz, L.A.
PDB entry 3kh7: Crystal structure of the periplasmic soluble domain of reduced CcmG from Pseudomonas aeruginosa
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-10-30
Authors: Di Matteo, A., Calosci, N., Gianni, S., Jemth, P., Brunori, M., Travaglini Allocatelli, C.
PDB entry 3kh8: Crystal structure of MaoC-like dehydratase from Phytophthora Capsici
Classification: LYASE
Source organism: Phytophthora Capsici
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-30
Authors: Wang, H., Zhang, K., Guo, J., Zhou, Q., Zheng, X., Sun, F., Pang, H., Zhang, X.
PDB entry 3kh9: Crystal structure of the periplasmic soluble domain of oxidized CcmG from Pseudomonas aeruginosa
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-10-30
Authors: Di Matteo, A., Calosci, N., Gianni, S., Jemth, P., Brunori, M., Travaglini Allocatelli, C.
PDB entry 3khb: Crystal structure of Escherichia coli AlkB with Co(II) and 2-OG
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-10-30
Authors: Hollis, T., Holland, P.J.
PDB entry 3khc: Crystal Structure of Escherichia coli AlkB in complex with ssDNA containing a 1-methylguanine lesion
Classification: oxidoreductase/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-10-30
Authors: Hollis, T., Holland, P.J.
PDB entry 3khd: Crystal Structure of PFF1300w.
Classification: TRANSFERASE
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-10-30
Authors: Wernimont, A.K., Hutchinson, A., Hassanali, A., Mackenzie, F., Cossar, D., Bochkarev, A., Arrowsmith, C.H., Bountra, C., Weigelt, J., Edwards, A.M., Hui, R., Pizarro, J.C., Bakszt, R., Hills, T., Structural Genomics Consortium (SGC)
PDB entry 3khe: Crystal structure of the calcium-loaded calmodulin-like domain of the CDPK, 541.m00134 from toxoplasma gondii
Classification: METAL BINDING PROTEIN
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-10-30
Authors: Wernimont, A.K., Hutchinson, A., Artz, J.D., Mackenzie, F., Cossar, D., Kozieradzki, I., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Hui, R., Qiu, W., Amani, M., Structural Genomics Consortium (SGC)
PDB entry 3khf: The crystal structure of the PDZ domain of human Microtubule Associated Serine/Threonine Kinase 3 (MAST3)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2009-10-30
Authors: Roos, A., Elkins, J., Savitsky, P., Wang, J., Ugochukwu, E., Murray, J., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A., von Delft, F., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3khg: Dpo4 extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion
Classification: TRANSFERASE/DNA
Source organism: Sulfolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2009-10-30
Authors: Rechkoblit, O., Malinina, L., Patel, D.J.
PDB entry 3khh: Dpo4 extension ternary complex with a C base opposite the 2-aminofluorene-guanine [AF]G lesion
Classification: TRANSFERASE/DNA
Source organism: Sulfolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-10-30
Authors: Rechkoblit, O., Malinina, L., Patel, D.J.
PDB entry 3khi: Crystal structure of a Putative Metal-dependent Hydrolase (YP_001336084.1) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.95 A resolution
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-10-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3khj: C. parvum inosine monophosphate dehydrogenase bound by inhibitor C64
Classification: OXIDOREDUCTASE
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-10-30
Authors: MacPherson, I.S., Hedstrom, L.K.
PDB entry 3khk: Crystal structure of type-I restriction-modification system methylation subunit (MM_0429) from Methanosarchina mazei.
Classification: DNA BINDING PROTEIN
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2009-10-30
Authors: Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3khl: Dpo4 post-extension ternary complex with misinserted A opposite the 2-aminofluorene-guanine [AF]G lesion
Classification: TRANSFERASE/DNA
Source organism: Sulfolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-30
Authors: Rechkoblit, O., Malinina, L., Patel, D.J.
PDB entry 3khm: Crystal structure of sterol 14alpha-demethylase (CYP51) from Trypanosoma cruzi in complex with inhibitor fluconazole
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2009-10-30
Authors: Lepesheva, G.I., Hargrove, T.Y., Anderson, S., Wawrzak, Z., Waterman, M.R.
PDB entry 3khn: Crystal structure of putative MotB like protein DVU_2228 from Desulfovibrio vulgaris.
Classification: structural genomics, unknown function
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2009-10-30
Authors: Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3kho: Crystal structure of murine Ig-beta (CD79b) homodimer
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2009-10-30
Authors: Radaev, S., Sun, P.D.
PDB entry 3khp: Crystal structure of a possible dehydrogenase from Mycobacterium tuberculosis at 2.3A resolution
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-10-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3khq: Crystal structure of murine Ig-beta (CD79b) in the monomeric form
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-10-30
Authors: Radaev, S., Sun, P.D.
PDB entry 3khr: Dpo4 post-extension ternary complex with the correct C opposite the 2-aminofluorene-guanine [AF]G lesion
Classification: TRANSFERASE/DNA
Source organism: Sulfolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2009-10-30
Authors: Rechkoblit, O., Malinina, L., Patel, D.J.
PDB entry 3khs: Crystal structure of grouper iridovirus purine nucleoside phosphorylase
Classification: HYDROLASE
Source organism: Grouper iridovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2009-10-30
Authors: Kang, Y.N., Zhang, Y., Allan, P.W., Parker, W.B., Ting, J.W., Chang, C.Y., Ealick, S.E.
PDB entry 3kht: Crystal structure of response regulator from Hahella chejuensis
Classification: SIGNALING PROTEIN
Source organism: Hahella chejuensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-30
Authors: Bagaria, A., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3khu: Crystal structure of human UDP-glucose dehydrogenase Glu161Gln, in complex with thiohemiacetal intermediate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-10-30
Authors: Chaikuad, A., Egger, S., Yue, W.W., Guo, K., Sethi, R., Filippakopoulos, P., Muniz, J.R.C., von Delft, F., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A.M., Kavanagh, K.L., Nidetzky, B., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 3khv: Crystal Structures of Urokinase-type Plasminogen Activator in Complex with 4-(Aminomethyl) Benzoic Acid and 4-(Aminomethyl-phenyl)-methanol
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-10-30
Authors: Jiang, L.-G., Zhao, G.-X., Bian, X.-B., Yuan, C., Huang, Z.-X., Huang, M.-D.
PDB entry 3khw: Crystal structure of the large c-terminal domain of polymerase basic protein 2 from influenza virus a/mexico/indre4487/2009(h1n1)
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Mexico/InDRE4487/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3khx: Crystal structure of Staphylococcus aureus metallopeptidase (Sapep/DapE) in the apo-form
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-10-31
Authors: Girish, T.S., Gopal, B.
PDB entry 3khy: Crystal Structure of a propionate kinase from Francisella tularensis subsp. tularensis SCHU S4
Classification: TRANSFERASE
Source organism: Francisella tularensis subsp. tularensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.978 Å
Deposited: 2009-10-31
Authors: Brunzelle, J.S., Skarina, T., Sharma, S., Wang, Y., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3khz: Crystal Structure of R350A mutant of Staphylococcus aureus metallopeptidase (Sapep/DapE) in the apo-form
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-10-31
Authors: Girish, T.S., Gopal, B.
PDB entry 3ki0: Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-D
Classification: Transferase,toxin
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2009-10-31
Authors: Jorgensen, R., Edwards, P.R., Merrill, A.R.
PDB entry 3ki1: Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-F
Classification: Transferase,toxin
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2009-10-31
Authors: Jorgensen, R., Edwards, P.R., Merrill, A.R.
PDB entry 3ki2: Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-G
Classification: Transferase,toxin
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2009-10-31
Authors: Jorgensen, R., Edwards, P.R., Merrill, A.R.
PDB entry 3ki3: Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-H
Classification: Transferase,toxin
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2009-10-31
Authors: Jorgensen, R., Edwards, P.R., Merrill, A.R.
PDB entry 3ki4: Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-P
Classification: Transferase,toxin
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-10-31
Authors: Jorgensen, R., Edwards, P.R., Merrill, A.R.
PDB entry 3ki5: Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-M
Classification: Transferase,toxin
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-10-31
Authors: Jorgensen, R., Edwards, P.R., Merrill, A.R.
PDB entry 3ki6: Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-L
Classification: Transferase,toxin
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2009-10-31
Authors: Jorgensen, R., Edwards, P.R., Merrill, A.R.
PDB entry 3ki7: Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-I
Classification: Transferase,toxin
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2009-10-31
Authors: Jorgensen, R., Edwards, P.R., Merrill, A.R.
PDB entry 3ki8: Crystal structure of hyperthermophilic nitrilase
Classification: HYDROLASE
Source organism: Pyrococcus abyssi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-10-31
Authors: Raczynska, J., Vorgias, C., Antranikian, G., Rypniewski, W.
PDB entry 3ki9: Crystal structure of Staphylococcus aureus metallopeptidase (Sapep/DapE) in the Mn2+ bound form
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-11-01
Authors: Girish, T.S., Gopal, B.
PDB entry 3kia: Crystal structure of mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus
Classification: TRANSFERASE
Source organism: Rubrobacter xylanophilus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-11-01
Authors: Macedo-Ribeiro, S., Pereira, P.J.B., Empadinhas, N., da Costa, M.S.
PDB entry 3kic: Crystal structure of adeno-associated virus serotype 3B
Classification: VIRUS
Source organism: Adeno-associated virus 3B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.603 Å
Deposited: 2009-11-01
Authors: Lerch, T.F., Xie, Q., Chapman, M.S.
PDB entry 3kid: The Crystal Structures of 2-Aminobenzothiazole-based Inhibitors in Complexes with Urokinase-type Plasminogen Activator
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2009-11-01
Authors: Jiang, L.-G., Yu, H.Y., Yuan, C., Wang, J.D., Chen, L.Q., Meehan, E.J., Huang, Z.-X., Huang, M.-D.
PDB entry 3kie: Crystal structure of adeno-associated virus serotype 3B
Classification: VIRUS
Source organism: Adeno-associated virus 3B
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-11-01
Authors: Lerch, T.F., Xie, Q., Chapman, M.S.
PDB entry 3kif: The crystal structures of two fragments truncated from 5-bladed beta-propeller lectin, tachylectin-2 (Lib1-B7-18 and Lib2-D2-15)
Classification: SUGAR BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-11-02
Authors: Dym, O., Tawfik, D.S., Yadid, I., Israel Structural Proteomics Center (ISPC)
PDB entry 3kig: Mutant carbonic anhydrase II in complex with an azide and an alkyne
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2009-11-02
Authors: Schulze-Wischeler, J., Niehage, N.U., Heine, A., Klebe, G.
PDB entry 3kih: The crystal structures of two fragments truncated from 5-bladed beta-propeller lectin, tachylectin-2 (Lib2-D2-15)
Classification: SUGAR BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2009-11-02
Authors: Dym, O., Tawfik, D.S., Yadid, I., Israel Structural Proteomics Center (ISPC)
PDB entry 3kii: AGAO 5-phenoxy-2,3-pentadienylamine complex
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-02
Authors: Nguyen, Y.H., Ernberg, K.E., Guss, J.M.
PDB entry 3kij: Crystal structure of the human PDI-peroxidase
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-02
Authors: Nguyen, D.V., Ruddock, L.W.
PDB entry 3kik: Sgf11:Sus1 complex
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-11-02
Authors: Stewart, M., Ellisdon, A.M.
PDB entry 3kin: KINESIN (DIMERIC) FROM RATTUS NORVEGICUS
Classification: MOTOR PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 1997-08-25
Authors: Kozielski, F., Sack, S., Marx, A., Thormahlen, M., Schonbrunn, E., Biou, V., Thompson, A., Mandelkow, E.-M., Mandelkow, E.
PDB entry 3kio: mouse RNase H2 complex
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-11-02
Authors: Shaban, N., Harvey, S., Perrino, F.W., Hollis, T.
PDB entry 3kip: Crystal structure of type-II 3-dehydroquinase from C. albicans
Classification: LYASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2009-11-02
Authors: Trapani, S., Schoehn, G., Navaza, J., Abergel, C.
PDB entry 3kiv: RECOMBINANT KRINGLE IV-10/M66 VARIANT OF HUMAN APOLIPOPROTEIN(A)
Classification: KRINGLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1998-09-08
Authors: Mochalkin, I., Tulinsky, A., Scanu, A.
PDB entry 3kiz: Crystal structure of Putative phosphoribosylformylglycinamidine cyclo-ligase (YP_676759.1) from CYTOPHAGA HUTCHINSONII ATCC 33406 at 1.50 A resolution
Classification: LIGASE
Source organism: Cytophaga hutchinsonii ATCC 33406
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-11-02
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kj0: Mcl-1 in complex with Bim BH3 mutant I2dY
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-11-02
Authors: Fire, E., Grant, R.A., Keating, A.E.
PDB entry 3kj1: Mcl-1 in complex with Bim BH3 mutant I2dA
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.945 Å
Deposited: 2009-11-02
Authors: Fire, E., Grant, R.A., Keating, A.E.
PDB entry 3kj2: Mcl-1 in complex with Bim BH3 mutant F4aE
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.351 Å
Deposited: 2009-11-02
Authors: Fire, E., Grant, R.A., Keating, A.E.