LiteFold/PDB huggingface dataset:
PDB entry 5j7u: Faustovirus major capsid protein
Classification: VIRAL PROTEIN
Source organism: Faustovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2016-04-06
Authors: Klose, T., Rossmann, M.G.
PDB entry 5j7v: Faustovirus major capsid protein
Classification: VIRUS
Source organism: Faustovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 15.5 Å
Deposited: 2016-04-06
Authors: Klose, T., Rossmann, M.G.
PDB entry 5j7w: Enterococcus faecalis thymidylate synthase complex with methotrexate
Classification: TRANSFERASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-04-07
Authors: Mangani, S., Pozzi, C.
PDB entry 5j7x: Baeyer-Villiger monooxygenase BVMOAFL838 from Aspergillus flavus
Classification: OXIDOREDUCTASE
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-07
Authors: Ferroni, F.M., Tolmie, C., Smit, M.S., Opperman, D.J.
PDB entry 5j7y: Architecture of loose respirasome
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2016-04-07
Authors: Letts, J.A., Fiedorczuk, F., Sazanov, L.A.
PDB entry 5j7z: Crystal structure of endoglycoceramidase I from Rhodococ-cus equi in complex with GM1
Classification: HYDROLASE
Source organism: Rhodococcus equi 103S
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2016-04-07
Authors: Chen, L.
PDB entry 5j80: Crystal Structure of Apo Hsp90-alpha N-domain L107A mutant
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2016-04-07
Authors: Amaral, M., Matias, P.
PDB entry 5j81: Crystal structure of Glycoprotein C from Puumala virus in the post-fusion conformation (pH 6.0)
Classification: VIRAL PROTEIN
Source organism: Puumala virus (strain P360)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-04-07
Authors: Willensky, S., Dessau, M.
PDB entry 5j82: Crystal Structure of Hsp90-alpha N-domain in complex 5-[4-(2-Fluoro-phenyl)-5-oxo-4,5-dihydro-1H-[1,2,4]triazol-3-yl]-2,4-dihydroxy-N-isopropyl-N-methyl-benzenesulfonamide
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2016-04-07
Authors: Amaral, M., Matias, P.
PDB entry 5j83: Crystal structure of L-arabinonate dehydratase in apo-form
Classification: LYASE
Source organism: Rhizobium leguminosarum bv. trifolii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.001 Å
Deposited: 2016-04-07
Authors: Rahman, M.M., Rouvinen, J., Hakulinen, N.
PDB entry 5j84: Crystal structure of L-arabinonate dehydratase in holo-form
Classification: LYASE
Source organism: Rhizobium leguminosarum bv. trifolii; Rhizobium leguminosarum bv. trifolii (strain WSM2304)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-04-07
Authors: Rahman, M.M., Rouvinen, J., Hakulinen, N.
PDB entry 5j85: Ser480Ala mutant of L-arabinonate dehydratase
Classification: LYASE
Source organism: Rhizobium leguminosarum bv. trifolii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-04-07
Authors: Rahman, M.M., Rouvinen, J., Hakulinen, N.
PDB entry 5j86: Crystal Structure of Hsp90-alpha N-domain in complex with 2,4-Dihydroxy-N-methyl-5-(5-oxo-4-o-tolyl-4,5-dihydro-1H-[1,2,4]triazol-3-yl)-N-thiophen-2-ylmethyl-benzamide
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2016-04-07
Authors: Amaral, M., Matias, P.
PDB entry 5j87: Discovery of N-(3-(5-((3-acrylamido-4-(morpholine-4-carbonyl)phenyl)amino)-1-methyl-6-oxo-1,6-dihydropyridin-3-yl)-2-methylphenyl)-4-(tert-butyl)benzamide (CHMFL-BTK-01) as a Highly Selective Irreversible BTK Kinase Inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2016-04-07
Authors: Yun, C.H., Zhang, S.
PDB entry 5j88: Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA
Classification: ribosome/antibiotic
Source organism: Escherichia coli; Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2016-04-07
Authors: Cocozaki, A., Ferguson, A.
PDB entry 5j89: Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-04-07
Authors: Zak, K.M., Grudnik, P., Guzik, K., Zieba, B.J., Musielak, B., Doemling, P., Dubin, G., Holak, T.A.
PDB entry 5j8a: Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline
Classification: ribosome/antibiotic
Source organism: Escherichia coli; Escherichia coli (strain K12); Escherichia coli O139:H28 (strain E24377A / ETEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2016-04-07
Authors: Cocozaki, A., Ferguson, A.
PDB entry 5j8b: Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome
Classification: RIBOSOME
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-04-07
Authors: Gagnon, M.G., Lin, J., Steitz, T.A.
PDB entry 5j8c: Human MOF C316S, E350Q crystal structure
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2016-04-07
Authors: McCullough, C.E., Marmorstein, R.
PDB entry 5j8d: Structure of nitroreductase from E. cloacae complexed with nicotinic acid adenine dinucleotide
Classification: OXIDOREDUCTASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-04-07
Authors: Haynes, C.A., Koder, R.L., Miller, A.F., Rodgers, D.W.
PDB entry 5j8e: Crystal structure of human Hook3's conserved Hook domain
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-04-07
Authors: Schroeder, C.M., Ekiert, D.C., Vale, R.D.
PDB entry 5j8f: Human MOF K274P crystal structure
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-04-07
Authors: McCullough, C.E., Marmorstein, R.
PDB entry 5j8g: Structure of nitroreductase from E. cloacae complexed with para-nitrobenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-07
Authors: Haynes, C.A., Koder, R.L., Miller, A.-F., Rodgers, D.W.
PDB entry 5j8h: Structure of calmodulin in a complex with a peptide derived from a calmodulin-dependent kinase
Classification: METAL BINDING PROTEIN/TRANSFERASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2016-04-07
Authors: Alphonse, S., Lee, K., Piserchio, A., Tavares, C.D.J., Giles, D.H., Wellmann, R.M., Dalby, K.N., Ghose, R.
PDB entry 5j8i: Crystal structure of TL11-113 bound to TAK1-TAB1
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.404 Å
Deposited: 2016-04-07
Authors: Gurbani, D., Westover, K.D.
PDB entry 5j8j: A histone deacetylase from Saccharomyces cerevisiae
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.716 Å
Deposited: 2016-04-07
Authors: Zhu, Y., Shen, H., Li, X., Teng, M.
PDB entry 5j8k: Architecture of supercomplex I-III2
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.8 Å
Deposited: 2016-04-08
Authors: Letts, J.A., Fiedorczuk, K., Sazanov, L.A.
PDB entry 5j8l: Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 1-deoxy L-tagatose, using a crystal grown in microgravity
Classification: ISOMERASE
Source organism: Pseudomonas cichorii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2016-04-08
Authors: Yoshida, H., Yoshihara, A., Izumori, K., Kamitori, S.
PDB entry 5j8m: Crystal Structure of Hsp90-alpha N-domain L107A mutant in complex with 5-(5-Bromo-2,4-dihydroxy-phenyl)-4-(2-fluoro-phenyl)-2,4-dihydro-[1,2,4]triazol-3-one
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-08
Authors: Amaral, M., Matias, P.
PDB entry 5j8n: Exonuclease III homologue Mm3148 from Methanosarcina mazei
Classification: HYDROLASE
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2016-04-08
Authors: Lakomek, K., Dickmanns, A., Ficner, R.
PDB entry 5j8o: Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-04-08
Authors: Zak, K.M., Grudnik, P., Guzik, K., Zieba, B.J., Musielak, B., Doemling, P., Dubin, G., Holak, T.A.
PDB entry 5j8p: Lys27-linked diubiquitin
Classification: PROTEIN BINDING
Experimental method: X-RAY DIFFRACTION
Resolution: 1.554 Å
Deposited: 2016-04-08
Authors: Pan, M., Gao, S., Zheng, Y.
PDB entry 5j8q: Crystal Structure of the Cysteine Desulfurase SufS of Bacillus subtilis
Classification: TRANSFERASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.702 Å
Deposited: 2016-04-08
Authors: Altegoer, F., Bange, G.
PDB entry 5j8r: Crystal Structure of the Catalytic Domain of Human Protein Tyrosine Phosphatase non-receptor Type 12 - K61R mutant
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.043 Å
Deposited: 2016-04-08
Authors: Li, H., Yang, F., Xu, Y.F., Wang, W.J., Xiao, P., Yu, X., Sun, J.P.
PDB entry 5j8s: Iron-free state of Rana Catesbeiana H' ferritin variant E57A/E136A/D140A
Classification: OXIDOREDUCTASE
Source organism: Lithobates catesbeiana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-04-08
Authors: Pozzi, C., Di Pisa, F., Mangani, S., Bernacchioni, C., Turano, P.
PDB entry 5j8t: NMR structure of Excalibur domain of CbpL
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae
Experimental method: SOLUTION NMR
Deposited: 2016-04-08
Authors: Pantoja-Uceda, D., Trevino, M.A., Bruix, M.
PDB entry 5j8u: Crystal Structure of Hsp90-alpha N-domain L107A mutant in complex with 5-(2,4-Dihydroxy-phenyl)-4-(2-fluoro-phenyl)-2,4-dihydro-[1,2,4]triazol-3-one
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2016-04-08
Authors: Amaral, M., Matias, P.
PDB entry 5j8v: Structure of rabbit ryanodine receptor RyR1 open state activated by calcium ion
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2016-04-08
Authors: Wang, X., Wei, R., Yin, C., Sun, F.
PDB entry 5j8w: One minute iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A
Classification: OXIDOREDUCTASE
Source organism: Lithobates catesbeiana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2016-04-08
Authors: Pozzi, C., Di Pisa, F., Mangani, S., Bernacchioni, C., Turano, P.
PDB entry 5j8x: CRYSTAL STRUCTURE OF E. COLI PBP5 WITH 2C
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2016-04-08
Authors: Brem, J., Cain, R., McDonough, M.A., Clifton, I.J., Fishwick, C.W.G., Schofield, C.J.
PDB entry 5j8y: Crystal structure of the Scm-SAM and Sfmbt-SAM heterodimer
Classification: NUCLEAR PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2016-04-08
Authors: Frey, F., Benda, C., Mueller, J.
PDB entry 5j8z: Human carbonic anhydrase II in complex with ligand
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-04-08
Authors: Alterio, V., De Simone, G.
PDB entry 5j90: Structure of Fjoh_4558, a chitin-binding SusD homolog from Flavobacterium johnsoniae
Classification: Chitin-binding protein
Source organism: Flavobacterium johnsoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3932 Å
Deposited: 2016-04-08
Authors: Koropatkin, N.M.
PDB entry 5j91: Structure of the Wild-type 70S E coli ribosome bound to Tigecycline
Classification: ribosome/antibiotic
Source organism: Escherichia coli; Escherichia coli (strain K12); Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2016-04-08
Authors: Cocozaki, A., Ferguson, A.
PDB entry 5j92: Crystal structure of a putative alpha-ketoglutarate dependent 2,4-D dioxygenase from Burkholderia xenovorans
Classification: OXIDOREDUCTASE
Source organism: Burkholderia xenovorans (strain LB400)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-04-08
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5j93: Five minutes iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A
Classification: OXIDOREDUCTASE
Source organism: Lithobates catesbeiana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2016-04-08
Authors: Pozzi, C., Di Pisa, F., Mangani, S., Bernacchioni, C., Turano, P.
PDB entry 5j94: Human cathepsin K mutant C25S in complex with the allosteric effector NSC13345
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22002 Å
Deposited: 2016-04-08
Authors: Novinec, M., Korenc, M., Lenarcic, B., Baici, A.
PDB entry 5j95: MAP4K4 in complex with inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-04-08
Authors: Liu, S.
PDB entry 5j96: Crystal structure of Slow Bee Paralysis Virus at 3.4A resolution
Classification: VIRUS
Source organism: Slow bee paralysis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2016-04-08
Authors: Kalynych, S., Levdansky, Y., Palkova, L., Plevka, P.
PDB entry 5j97: Dimerization domain of cytoplasmic activation/proliferation-associated protein-2 (caprin-2)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2016-04-08
Authors: Wu, Y., Zhu, J., Huang, X., Du, Z.
PDB entry 5j98: Crystal structure of Slow Bee Paralysis Virus at 2.6A resolution
Classification: VIRUS
Source organism: Slow bee paralysis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-04-08
Authors: Kalynych, S., Levdansky, Y., Palkova, L., Plevka, P.
PDB entry 5j99: Ambient temperature transition state structure of arginine kinase - crystal 8/Form I
Classification: TRANSFERASE
Source organism: Limulus polyphemus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-04-08
Authors: Godsey, M., Davulcu, O., Nix, J., Skalicky, J.J., Bruschweiler, R., Chapman, M.S.
PDB entry 5j9a: Ambient temperature transition state structure of arginine kinase - crystal 11/Form II
Classification: TRANSFERASE
Source organism: Limulus polyphemus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.997 Å
Deposited: 2016-04-08
Authors: Godsey, M., Davulcu, O., Nix, J., Skalicky, J.J., Bruschweiler, R., Chapman, M.S.
PDB entry 5j9b: Crystal structure of peroxiredoxin Asp f3
Classification: OXIDOREDUCTASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-04-08
Authors: Bzymek, K.P., Williams, J.C., Hong, T.B., Bagramyan, K., Kalkum, M.
PDB entry 5j9c: Crystal structure of peroxiredoxin Asp f3 C31S/C61S variant
Classification: OXIDOREDUCTASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.956 Å
Deposited: 2016-04-08
Authors: Bzymek, K.P., Williams, J.C., Hong, T.B., Bagramyan, K., Kalkum, M.
PDB entry 5j9f: Human GAR transformylase in complex with GAR and (4-{[2-(2-Amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-6-yl)ethyl]amino}benzoyl)-L-glutamic acid (AGF183)
Classification: ligase/ligase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-04-09
Authors: Wong, J., Deis, S.M., Dann III, C.E.
PDB entry 5j9g: Structure of Lactobacillus acidophilus glyceraldehyde-3-phosphate dehydrogenase at 2.21 angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2016-04-10
Authors: Patel, D., Pappachan, A., Singh, D.D.
PDB entry 5j9h: Crystal structure of Glycoprotein C from Puumala virus in the post-fusion conformation (pH 8.0)
Classification: VIRAL PROTEIN
Source organism: Puumala virus (strain P360)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-04-10
Authors: Willensky, S., Dessau, M.
PDB entry 5j9i: Crystal structure of the HigA2 antitoxin C-terminal domain
Classification: ANTITOXIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.797 Å
Deposited: 2016-04-10
Authors: Hadzi, S., Loris, R.
PDB entry 5j9k: Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) in complex with rice D53 repressor EAR peptide motif
Classification: TRANSCRIPTION
Source organism: Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2016-04-10
Authors: Ke, J., Ma, H., Gu, X., Brunzelle, J.S., Xu, H.E., Melcher, K.
PDB entry 5j9l: Crystal structure of CPT1691 bound to TAK1-TAB1
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7515 Å
Deposited: 2016-04-10
Authors: Gurbani, D., Westover, K.D.
PDB entry 5j9m: tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 2-(methylamino)-1H-benzo[d]imidazole-5-carboxamide
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2016-04-10
Authors: Ehrmann, F.R., Heine, A., Klebe, G.
PDB entry 5j9n: tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 2-(methylamino)-1H-benzo[d]imidazole-5-carbohydrazide
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2016-04-10
Authors: Ehrmann, F.R., Heine, A., Klebe, G.
PDB entry 5j9o: tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 1-(2-(methylamino)-1H-benzo[d]imidazol-6-yl)guanidine
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2016-04-10
Authors: Ehrmann, F.R., Heine, A., Klebe, G.
PDB entry 5j9p: KcsA in vitro
Classification: METAL TRANSPORT
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2016-04-10
Authors: Matulef, K., Valiyaveetil, F.I.
PDB entry 5j9q: Crystal structure of the NuA4 core complex
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2016-04-11
Authors: Chen, Z.C., Xu, P.
PDB entry 5j9r: Structure of Penicillin V acylase from Agrobacterium tumefaciens
Classification: HYDROLASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-04-11
Authors: Ramasamy, S., Avinash, V.S., Pundle, A.V.
PDB entry 5j9s: ENL YEATS in complex with histone H3 acetylation at K27
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.702 Å
Deposited: 2016-04-11
Authors: Li, Y., Li, H.
PDB entry 5j9t: Crystal structure of the NuA4 core complex
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-04-11
Authors: Chen, Z.C., Xu, P.
PDB entry 5j9u: Crystal structure of the NuA4 core complex
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2016-04-11
Authors: Chen, Z.C., Xu, P.
PDB entry 5j9v: Ten minutes iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A
Classification: OXIDOREDUCTASE
Source organism: Lithobates catesbeiana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2016-04-11
Authors: Pozzi, C., Di Pisa, F., Mangani, S., Bernacchioni, C., Turano, P.
PDB entry 5j9w: Crystal structure of the NuA4 core complex
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-04-11
Authors: Chen, Z.C., Xu, P.
PDB entry 5j9x: HSP90 in complex with N-Butyl-5-[4-(2-fluoro-phenyl)-5-oxo-4,5-dihydro-1H-[1,2,4]triazol-3-yl]-2,4-dihydroxy-N-methyl-benzamide
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-04-11
Authors: Amaral, M., Matias, P.
PDB entry 5j9y: EGFR-T790M in complex with pyrazolopyrimidine inhibitor 1b
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-04-11
Authors: Becker, C., Engel, J., Rauh, D.
PDB entry 5j9z: EGFR-T790M in complex with pyrazolopyrimidine inhibitor 1a
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-04-11
Authors: Becker, C., Engel, J., Rauh, D.
PDB entry 5ja0: Crystal structure of human FPPS with allosterically bound FPP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-11
Authors: Park, J., Zielinski, M., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 5ja1: EntF, a Terminal Nonribosomal Peptide Synthetase Module Bound to the MbtH-Like Protein YbdZ
Classification: LIGASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-04-11
Authors: Miller, B.R., Gulick, A.M.
PDB entry 5ja2: EntF, a Terminal Nonribosomal Peptide Synthetase Module Bound to the non-Native MbtH-Like Protein PA2412
Classification: LIGASE
Source organism: Escherichia coli (strain K12); Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-04-11
Authors: Miller, B.R., Gulick, A.M.
PDB entry 5ja3: Mycobacterium tuberculosis Dihydrofolate Reductase complexed with beta- NADPH and 3'-(3-(2,4-diamino-6-ethylpyrimidin-5-yl)prop-2-yn-1-yl)-4'-methoxy-[1,1'-b iphenyl]-4-carboxylic acid (UCP1106)
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.814 Å
Deposited: 2016-04-11
Authors: Hajian, B., Anderson, A.C.
PDB entry 5ja4: Crystal structure of human TONSL and MCM2 HBDs binding to a histone H3-H4 tetramer
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.424 Å
Deposited: 2016-04-11
Authors: Huang, H., Patel, D.
PDB entry 5ja5: Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) L111A and L130A mutant in complex with rice D53 repressor EAR peptide motif
Classification: TRANSCRIPTION
Source organism: Oryza sativa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-04-12
Authors: Ke, J., Ma, H., Gu, X., Brunzelle, J.S., Xu, H.E., Melcher, K.
PDB entry 5ja7: Human cathepsin K mutant C25S in complex with the allosteric effector NSC94914
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2016-04-12
Authors: Novinec, M., Korenc, M., Lenarcic, B.
PDB entry 5ja8: Crystal structure of the HigB2 toxin in complex with Nb2
Classification: TOXIN
Source organism: Lama glama; Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2016-04-12
Authors: Hadzi, S., Loris, R.
PDB entry 5ja9: Crystal structure of the HigB2 toxin in complex with Nb6
Classification: TOXIN
Source organism: Lama glama; Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.849 Å
Deposited: 2016-04-12
Authors: Hadzi, S., Loris, R.
PDB entry 5jaa: Crystal structure of the HigBA2 toxin-antitoxin complex
Classification: TOXIN
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.993 Å
Deposited: 2016-04-12
Authors: Hadzi, S., Loris, R.
PDB entry 5jab: Structure of the biliverdin reductase Rv2074 from Mycobacterium tuberculosis in complex with F420
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-04-12
Authors: Ahmed, F.H., Carr, P.D., Jackson, C.J.
PDB entry 5jac: Sixty minutes iron loaded Rana Catesbeiana H' ferritin variant E57A/E136A/D140A
Classification: OXIDOREDUCTASE
Source organism: Lithobates catesbeiana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2016-04-12
Authors: Pozzi, C., Di Pisa, F., Mangani, S., Bernacchioni, C., Turano, P.
PDB entry 5jad: Compound binding to Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA2)discovered through fragment screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2016-04-12
Authors: Day, P.J., Woolford, A.J.-A.
PDB entry 5jae: LeuT in the outward-oriented, Na+-free return state, P21 form at pH 6.5
Classification: MEMBRANE PROTEIN
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-04-12
Authors: Malinauskaite, L., Sahin, C., Said, S., Grouleff, J., Shahsavar, A., Bjerregaard, H., Noer, P., Severinsen, K., Boesen, T., Schiott, B., Sinning, S., Nissen, P.
PDB entry 5jaf: LeuT Na+-free Return State, C2 form at pH 5
Classification: TRANSPORT PROTEIN
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.021 Å
Deposited: 2016-04-12
Authors: Malinauskaite, L., Sahin, C., Said, S., Grouleff, J., Shahsavar, A., Bjerregaard, H., Noer, P., Severinsen, K., Boesen, T., Schiott, B., Sinning, S., Nissen, P.
PDB entry 5jag: LeuT T354H mutant in the outward-oriented, Na+-free Return State
Classification: TRANSPORT PROTEIN
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2016-04-12
Authors: Malinauskaite, L., Sahin, C., Said, S., Grouleff, J., Shahsavar, A., Bjerregaard, H., Noer, P., Severinsen, K., Boesen, T., Schiott, B., Sinning, S., Nissen, P.
PDB entry 5jah: Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA<sub>2</sub>) Discovered Through X-Ray Fragment Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2016-04-12
Authors: Day, P.J.
PDB entry 5jai: Yersinia pestis FabV variant T276G
Classification: OXIDOREDUCTASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-12
Authors: Pschibul, A., Kuper, J., HIrschbeck, M., Kisker, C.
PDB entry 5jaj: Structure of chicken LGP2 witha 5'p 10-mer dsRNA and ADP-AlF4-Mg.
Classification: RNA BINDING PROTEIN
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-04-12
Authors: Cusack, S., Uchikawa, E.
PDB entry 5jak: Crystal structure of the flagellar assembly factor FliW
Classification: TRANSLATION
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2016-04-12
Authors: Altegoer, F., Bange, G.
PDB entry 5jal: Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA<sub>2</sub>) Discovered Through X-Ray Fragment Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2016-04-12
Authors: Day, P.J.
PDB entry 5jam: Yersinia pestis FabV variant T276V
Classification: OXIDOREDUCTASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-04-12
Authors: Pschibul, A., Kuper, J., HIrschbeck, M., Kisker, C.
PDB entry 5jan: Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA<sub>2</sub>) Discovered Through X-Ray Fragment Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2016-04-12
Authors: Day, P.J.
PDB entry 5jao: Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA<sub>2</sub>) Discovered Through X-Ray Fragment Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2016-04-12
Authors: Day, P.J.
PDB entry 5jap: Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA<sub>2</sub>) Discovered Through X-Ray Fragment Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2016-04-12
Authors: Day, P.J.
PDB entry 5jaq: Yersinia pestis FabV variant T276C
Classification: OXIDOREDUCTASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-12
Authors: Pschibul, A., Kuper, J., HIrschbeck, M., Kisker, C.
PDB entry 5jar: Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA<sub>2</sub>) Discovered Through X-Ray Fragment Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2016-04-12
Authors: Day, P.J.
PDB entry 5jas: Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA<sub>2</sub>) Discovered Through X-Ray Fragment Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2016-04-12
Authors: Day, P.J.
PDB entry 5jat: Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA<sub>2</sub>) Discovered Through X-Ray Fragment Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2016-04-12
Authors: Day, P.J.
PDB entry 5jau: Exploitation of a Novel Binding Pocket in Human Lipoprotein-Associated Phospholipase A2 (Lp-PLA<sub>2</sub>) Discovered Through X-Ray Fragment Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-04-12
Authors: Day, P.J.
PDB entry 5jav: Crystal structure of Staphylococcal nuclease variant Delta+PHS Y91D at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.895 Å
Deposited: 2016-04-12
Authors: Skerritt, L.A., Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 5jaw: Structure of a beta galactosidase with inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus (strain Ueda107)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-04-12
Authors: Offen, W., Davies, G.
PDB entry 5jax: PKG I's Carboyl Terminal Cyclic Nucleotide Binding Domain (CNB-B) in a complex with 8-Br-cGMP
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.486 Å
Deposited: 2016-04-12
Authors: Campbell, J.C., Sankaran, B., Kim, C.W.
PDB entry 5jay: Crystal Structure of an 8-amino-7-oxononanoate Synthase from Burkholderia xenovorans
Classification: TRANSFERASE
Source organism: Burkholderia xenovorans (strain LB400)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2016-04-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5jaz: Structure of Plasmodium falciparum DXR in complex with a beta-substituted fosmidomycin analogue, LC51 and manganese
Classification: OXIDOREDUCTASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2016-04-12
Authors: Sooriyaarachchi, S., Bergfors, T., Jones, T.A., Mowbray, S.L.
PDB entry 5jb1: Pseudo-atomic structure of Human Papillomavirus Type 59 L1 Virus-like Particle
Classification: VIRUS
Source organism: Human papillomavirus type 59
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2016-04-13
Authors: Li, Z.H., Yan, X.D., Yu, H., Zheng, Q.B., Gu, Y., Li, S.W.
PDB entry 5jb2: Crystal structure of chicken LGP2 with 5'ppp 10-mer dsRNA and ADP-AlF4-Mg2+ at 2.2 A resolution.
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-04-13
Authors: Cusack, S., Uchikawa, E.
PDB entry 5jb3: Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation
Classification: TRANSLATION
Source organism: Escherichia coli; Pyrococcus abyssi GE5; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.34 Å
Deposited: 2016-04-13
Authors: Coureux, P.-D., Schmitt, E., Mechulam, Y.
PDB entry 5jb4: A simplified BPTI variant containing 21 alanines out 58 of residues
Classification: HYDROLASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2016-04-13
Authors: Islam, M.M.
PDB entry 5jb5: A simplified BPTI variant containing 22 alanines out of 58 residues
Classification: HYDROLASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-04-13
Authors: Islam, M.M.
PDB entry 5jb6: A simplified BPTI variant containing 23 alanines out of 58 residues
Classification: HYDROLASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-13
Authors: Islam, M.M.
PDB entry 5jb7: A simplified BPTI variant containing 24 alanines out of 58 residues
Classification: HYDROLASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-13
Authors: Islam, M.M.
PDB entry 5jb8: Crystal structure of factor IXa variant K98T in complex with EGR-chloromethylketone
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-04-13
Authors: Kristensen, L.H., Brandstetter, H.
PDB entry 5jb9: Crystal structure of factor IXa K98T variant in complex with PPACK
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2016-04-13
Authors: Kristensen, L.H., Brandstetter, H.
PDB entry 5jba: Crystal structure of factor IXa variant V16I K98T Y177T I212V in complex with PPACK
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2016-04-13
Authors: Kristensen, L.H., Brandstetter, H.
PDB entry 5jbb: Crystal structure of factor IXa variant V16I K98T Y177T I213V in complex with EGR-chloromethylketone
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2016-04-13
Authors: Kristensen, L.H., Brandstetter, H.
PDB entry 5jbc: Crystal structure of factor IXa variant V16I K98T Y177T I213V in complex with PPACK
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-13
Authors: Kristensen, L.H., Brandstetter, H.
PDB entry 5jbd: 4,6-alpha-glucanotransferase GTFB from Lactobacillus reuteri 121
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-04-13
Authors: Pijning, T., Dijkstra, B.W., Bai, Y., Gangoiti-Munecas, J., Dijkhuizen, L.
PDB entry 5jbe: 4,6-alpha-glucanotransferase GTFB from Lactobacillus reuteri 121 complexed with an isomalto-maltopentasaccharide
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-04-13
Authors: Pijning, T., Dijkstra, B.W., Bai, Y., Gangoiti-Munecas, J., Dijkhuizen, L.
PDB entry 5jbf: 4,6-alpha-glucanotransferase GTFB (D1015N mutant) from Lactobacillus reuteri 121 complexed with maltopentaose
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2016-04-13
Authors: Pijning, T., Dijkstra, B.W., Bai, Y., Gangoiti-Munecas, J., Dijkhuizen, L.
PDB entry 5jbg: Crystal structure of chicken LGP2 with 5'ppp 26-mer hairpin RNA with 3' GG overhang and ADP-AlF4-Mg2+ at 2.0 A resolution.
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-04-13
Authors: Cusack, S., Uchikawa, E.
PDB entry 5jbh: Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformation
Classification: TRANSCRIPTION
Source organism: Escherichia coli; Pyrococcus abyssi GE5; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.34 Å
Deposited: 2016-04-13
Authors: Coureux, P.-D., Schmitt, E., Mechulam, Y.
PDB entry 5jbi: Structure of Plasmodium falciparum DXR in complex with a beta-substituted fosmidomycin analogue, LC52 and manganese
Classification: OXIDOREDUCTASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-04-13
Authors: Sooriyaarachchi, S., Bergfors, T., Jones, T.A., Mowbray, S.L.
PDB entry 5jbj: Crystal structure of chicken LGP2 with 5'p 12-mer dsRNA at 3.6 A resolution
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.58 Å
Deposited: 2016-04-13
Authors: Cusack, S., Uchikawa, E., Lethier, M.
PDB entry 5jbk: Trichoderma harzianum GH1 beta-glucosidase ThBgl1
Classification: HYDROLASE
Source organism: Trichoderma harzianum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.593 Å
Deposited: 2016-04-13
Authors: Florindo, R.N., Mutti, H.S., Polikarpov, I., Nascimento, A.S.
PDB entry 5jbl: Structure of the bacteriophage T4 capsid assembly protease, gp21.
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.943 Å
Deposited: 2016-04-13
Authors: Fokine, A., Rossmann, M.G.
PDB entry 5jbm: Crystal structgure of Cac1 C-terminus
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-04-13
Authors: Churchill, M.E.A., Liu, W., Zhou, Y.
PDB entry 5jbn: Crystal Structure of Apo Phosphopantetheine Adenylyltransferase (PPAT/CoaD) from E. coli
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-04-13
Authors: Mamo, M., Proudfoot, A., Bussiere, D.
PDB entry 5jbo: Trichoderma harzianum GH1 beta-glucosidase ThBgl2
Classification: HYDROLASE
Source organism: Trichoderma harzianum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2016-04-13
Authors: Florindo, R.N., Mutti, H.S., Polikarpov, I., Nascimento, A.S.
PDB entry 5jbq: EF-TU (ESCHERICHIA COLI) IN COMPLEX WITH THIOMURACIN ANALOG
Classification: RNA BINDING PROTEIN/ANTIMICROBIAL
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.006 Å
Deposited: 2016-04-13
Authors: Palestrant, D., Stams, T.
PDB entry 5jbr: Crystal structure of uncharacterized protein Bcav_2135 from Beutenbergia cavernae
Classification: Structural Genomics, Unknown function
Source organism: Beutenbergia cavernae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-04-13
Authors: Chang, C., Cuff, M., Hatzos-Skintges, C., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 5jbs: Conformational changes during monomer-to-dimer transition of Brucella suis VirB8
Classification: TRANSPORT PROTEIN
Source organism: Brucella suis biovar 1 (strain 1330)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-04-13
Authors: Arya, T., Sharifahmadian, M., Sygusch, J., Baron, B.
PDB entry 5jbt: Mesotrypsin in complex with cleaved amyloid precursor like protein 2 inhibitor (APLP2)
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2016-04-13
Authors: Kayode, O., Wang, R., Pendlebury, D., Soares, A., Radisky, E.S.
PDB entry 5jbv: Lys27-linked triubiquitin
Classification: PROTEIN BINDING
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2016-04-13
Authors: Pan, M., Gao, S., Zheng, Y.
PDB entry 5jbw: Crystal structure of LiuC
Classification: LYASE
Source organism: Myxococcus xanthus (strain DK 1622)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2016-04-14
Authors: Bock, T., Reichelt, J., Mueller, R., Blankenfeldt, W.
PDB entry 5jbx: Crystal structure of LiuC in complex with coenzyme A and malonic acid
Classification: LYASE
Source organism: Myxococcus xanthus (strain DK 1622)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2016-04-14
Authors: Bock, T., Reichelt, J., Mueller, R., Blankenfeldt, W.
PDB entry 5jby: Lys27-linked triubiquitin
Classification: PROTEIN BINDING
Experimental method: X-RAY DIFFRACTION
Resolution: 1.987 Å
Deposited: 2016-04-14
Authors: Pan, M., Gao, S., Zheng, Y.
PDB entry 5jc1: Structure of Plasmodium falciparum DXR in complex with a beta-substituted fosmidomycin analogue, LC55 and manganese
Classification: OXIDOREDUCTASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-04-14
Authors: Sooriyaarachchi, S., Bergfors, T., Jones, T.A., Mowbray, S.L.
PDB entry 5jc3: Crystal structure of chicken MDA5 with 5'p 10-mer dsRNA and ADP-Mg2+ at 2.6 A resolution (monoclinic form, twinned).
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-04-14
Authors: Cusack, S., Uchikawa, E.
PDB entry 5jc6: Carboxypeptidase B with 2-nd zinc and acetate ion
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2016-04-14
Authors: Timofeev, V.I., Akparov, V.K., Kuranova, I.P.
PDB entry 5jc7: Crystal structure of chicken MDA5 with 5'p 24-mer dsRNA and ADP-Mg2+ at 2.75 A resolution.
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2016-04-14
Authors: Cusack, S., Uchikawa, E.
PDB entry 5jc8: Crystal structure of a putative short-chain dehydrogenase/reductase from Burkholderia xenovorans
Classification: OXIDOREDUCTASE
Source organism: Burkholderia xenovorans (strain LB400)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-04-14
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5jc9: Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA
Classification: RIBOSOME
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2016-04-14
Authors: Cocozaki, A., Ferguson, A.
PDB entry 5jca: NADP(H) bound NADH-dependent Ferredoxin:NADP Oxidoreductase (NfnI) from Pyrococcus furiosus
Classification: OXIDOREDUCTASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-04-14
Authors: Zadvornyy, O.A., Schut, G.J., Nguyen, D.M., Artz, J.H., Tokmina-Lukaszewska, M., Lipscomb, G., Adams, M.W., Peters, J.W.
PDB entry 5jcb: Microtubule depolymerizing agent podophyllotoxin derivative YJTSF1
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-04-14
Authors: Guan, Z., Zhao, W., Yin, P.
PDB entry 5jcd: Crystal structure of OsCEBiP
Classification: SUGAR BINDING PROTEIN
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-04-15
Authors: Chai, J.J., Liu, S.M., Wang, J.Z.
PDB entry 5jce: Crystal structure of OsCEBiP complex
Classification: SUGAR BINDING PROTEIN
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2016-04-15
Authors: Chai, J.J., Liu, S.M., Wang, J.Z.
PDB entry 5jcf: Crystal structure of chicken MDA5 with 5'p 10-mer dsRNA and ADP-Mg2+ at 2.6 A resolution (orthorhombic form).
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-04-15
Authors: Cusack, S., Uchikawa, E.
PDB entry 5jcg: Structure of Human Peroxiredoxin 3 as three stacked rings
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-04-15
Authors: Yewdall, N.A., Gerrard, J.A., Goldstone, D.C.
PDB entry 5jch: Crystal structure of chicken MDA5 with 5'p 10-mer dsRNA and ADP-Mg2+ at 2.95 A resolution (untwinned).
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2016-04-15
Authors: Cusack, S., Uchikawa, E.
PDB entry 5jci: Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Classification: HYDROLASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-04-15
Authors: Park, A.K., Kim, H.W.
PDB entry 5jcj: Trypanosoma brucei PTR1 in complex with inhibitor NMT-H037 (compound 7)
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2016-04-15
Authors: Landi, G., Pozzi, C., Di Pisa, F., Dello Iacono, L., Mangani, S.
PDB entry 5jck: Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Classification: HYDROLASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-04-15
Authors: Park, A.K., Kim, H.W.
PDB entry 5jcl: Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Classification: OXIDOREDUCTASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-04-15
Authors: Park, A.K., Kim, H.W.
PDB entry 5jcm: Structure and catalytic mechanism of monodehydroascorbate reductase, MDHAR, from Oryza sativa L. japonica
Classification: OXIDOREDUCTASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-15
Authors: Park, A.K., Kim, H.W.