LiteFold/PDB huggingface dataset:
PDB entry 6oiy: Structure of Escherichia coli bound to dGTP
Classification: metal binding protein, hydrolase
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2019-04-09
Authors: Barnes, C.O., Wu, Y., Calero, G.
PDB entry 6oiz: Amyloid-Beta (20-34) wild type
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.1 Å
Deposited: 2019-04-10
Authors: Sawaya, M.R., Warmack, R.A., Zee, C.T., Gonen, T., Clarke, S.G., Eisenberg, D.S.
PDB entry 6oj0: Cryo-EM reconstruction of Sulfolobus polyhedral virus 1 (SPV1)
Classification: VIRUS
Source organism: Sulfolobus polyhedral virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-04-10
Authors: Wang, F., Liu, Y., Conway, J.F., Krupovic, M., Prangishvili, D., Egelman, E.H.
PDB entry 6oj1: Crystal Structure of Aspergillus fumigatus Ega3
Classification: HYDROLASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2019-04-10
Authors: Bamford, N.C., Subramanian, A.S., Millan, C., Uson, I., Howell, P.L.
PDB entry 6oj2: Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2019-04-10
Authors: Nguyen, H.A., Sunita, S., Dunham, C.M.
PDB entry 6oj3: In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP)
Classification: VIRAL PROTEIN/TRANSFERASE
Source organism: Rotavirus A (strain RVA/Monkey/United States/RRV/1975/G3P5B[3])
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2019-04-10
Authors: Jenni, S., Salgado, E.N., Herrmann, T., Li, Z., Grant, T., Grigorieff, N., Trapani, S., Estrozi, L.F., Harrison, S.C.
PDB entry 6oj4: In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP)
Classification: VIRAL PROTEIN/TRANSFERASE
Source organism: Rotavirus A (strain RVA/Monkey/United States/RRV/1975/G3P5B[3])
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-04-10
Authors: Jenni, S., Salgado, E.N., Herrmann, T., Li, Z., Grant, T., Grigorieff, N., Trapani, S., Estrozi, L.F., Harrison, S.C.
PDB entry 6oj5: In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP_RNA)
Classification: VIRAL PROTEIN/TRANSFERASE
Source organism: Rotavirus A (strain RVA/Monkey/United States/RRV/1975/G3P5B[3])
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2019-04-10
Authors: Jenni, S., Salgado, E.N., Herrmann, T., Li, Z., Grant, T., Grigorieff, N., Trapani, S., Estrozi, L.F., Harrison, S.C.
PDB entry 6oj6: In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP_RNA)
Classification: VIRAL PROTEIN/TRANSFERASE/RNA
Source organism: Rotavirus A (strain RVA/Monkey/United States/RRV/1975/G3P5B[3])
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2019-04-10
Authors: Jenni, S., Salgado, E.N., Herrmann, T., Li, Z., Grant, T., Grigorieff, N., Trapani, S., Estrozi, L.F., Harrison, S.C.
PDB entry 6oj7: Respiratory syncytial virus fusion glycoprotein N-terminal heptad repeat domain+VIQKI I456F
Classification: ANTIVIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2019-04-10
Authors: Outlaw, V.K., Gellman, S.H.
PDB entry 6oja: Crystal structure of the N. meningitides methionine-binding protein in its L-methionine bound conformation
Classification: PROTEIN BINDING
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-04-11
Authors: Nguyen, P.T., Lai, J.Y., Kaiser, J.T., Rees, D.C.
PDB entry 6ojb: Crystal Structure of Aspergillus fumigatus Ega3 complex with galactosamine
Classification: HYDROLASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.093 Å
Deposited: 2019-04-11
Authors: Bamford, N.C., Howell, P.L.
PDB entry 6ojc: A high-resolution crystal structure of NocB thioesterase domain from Nocardicin cluster
Classification: HYDROLASE
Source organism: Nocardia uniformis subsp. tsuyamanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2019-04-11
Authors: Patel, K.D., Gulick, A.M.
PDB entry 6ojd: A high-resolution crystal structure of covalent complex of NocB thioesterase domain with fluorophosphonate nocardicin G analog
Classification: HYDROLASE
Source organism: Nocardia uniformis subsp. tsuyamanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2019-04-11
Authors: Patel, K.D., Gulick, A.M.
PDB entry 6oje: Dimeric structure of LRRK2 GTPase domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-04-11
Authors: Hoang, Q.Q., Wu, C.X., Liao, J., Park, Y.
PDB entry 6ojf: Dimeric structure of LRRK2 GTPase domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-04-11
Authors: Hoang, Q.Q., Wu, C.X., Liao, J., Park, Y.
PDB entry 6ojh: Crystal Structure of Haemophilus Influenzae Biotin Carboxylase Complexed with (R)-7-(3-aminopyrrolidin-1-yl)-6-(naphthalen-1-yl)pyrido[2,3-d]pyrimidin-2-amine
Classification: LIGASE
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2019-04-11
Authors: Andrews, L.D., Kane, T.R., Dozzo, P., Haglund, C.M., Hilderbrandt, D.J., Linsell, M.S., Machajewski, T., McEnroe, G., Serio, A.W., Wlasichuk, K.B., Neau, D.B., Pakhomova, S., Waldrop, G.L., Sharp, M., Pogliano, J., Cirz, R., Cohen, F.
PDB entry 6ojj: Structure of ScAtg3 with truncations in N-terminal and flexible region (FR)
Classification: LIGASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.406 Å
Deposited: 2019-04-11
Authors: Zheng, Y., Qiu, Y., Schulman, B.A.
PDB entry 6ojk: Structure of YePL2A K291W in Complex with Tetragalacturonic Acid
Classification: LYASE
Source organism: Yersinia enterocolitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-04-11
Authors: Jones, D.R., Abbott, D.W.
PDB entry 6ojl: Structure of YePL2A R194K in Complex with Pentagalacturonic Acid
Classification: LYASE
Source organism: Yersinia enterocolitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-04-11
Authors: Jones, D.R., Abbott, D.W.
PDB entry 6ojm: Crystal structure of 1,4-dihydroxy-2-naphthoyl-CoA synthase Elizabethkingia anophelis NUHP1
Classification: LYASE
Source organism: Elizabethkingia anophelis NUHP1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-04-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6ojn: Comparative Model of SGIV Major Coat Protein (MCP) Trimer Based on Cryo-EM Map
Classification: VIRAL PROTEIN
Source organism: Singapore grouper iridovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.6 Å
Deposited: 2019-04-11
Authors: Pintilie, G., Chen, D.-H., Tran, B.N., Jakana, J., Wu, J., Hew, C.L., Chiu, W.
PDB entry 6ojo: Dihydroneopterin aldolase (DHNA) from Yersinia pestis co-crystallized with pterine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.886 Å
Deposited: 2019-04-11
Authors: Bourne, C.R.
PDB entry 6ojp: Structure of glycolipid alpha-GSA[8,6P] in complex with mouse CD1d
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2019-04-11
Authors: Zajonc, D.M., Bitra, A.
PDB entry 6ojq: Monomeric kinesin-1 motor domain in no-nucleotide state bound to GMPCPP-stabilized microtubule
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2019-04-12
Authors: Cha, H.K., Debs, G.
PDB entry 6ojr: Crystal structure of Sphingomonas paucimobilis TMY1009 apo-LsdA
Classification: OXIDOREDUCTASE
Source organism: Sphingomonas paucimobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-04-12
Authors: Kuatsjah, E., Verstraete, M.M., Kobylarz, M.J., Liu, A.K.N., Murphy, M.E.P., Eltis, L.D.
PDB entry 6ojs: Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP, MTX and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-D-glutamic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Cryptosporidium hominis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.214 Å
Deposited: 2019-04-12
Authors: Czyzyk, D.J., Anderson, K.S., Jorgensen, W.L., Valhondo, M.
PDB entry 6ojt: Crystal structure of Sphingomonas paucimobilis TMY1009 LsdA phenylazophenol complex
Classification: OXIDOREDUCTASE
Source organism: Sphingomonas paucimobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-04-12
Authors: Kuatsjah, E., Verstraete, M.M., Kobylarz, M.J., Liu, A.K.N., Murphy, M.E.P., Eltis, L.D.
PDB entry 6oju: Crystal structure of human thymidylate synthase Delta (7-29) in complex with dUMP and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-D-glutamic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.884 Å
Deposited: 2019-04-12
Authors: Czyzyk, D.J., Anderson, K.S., Valhondo, M., Jorgensen, W.L.
PDB entry 6ojv: Crystal structure of human thymidylate synthase delta(7-29) in complex with dUMP and 2-amino-4-oxo-4,7-dihydro-pyrrolo[2,3-d]pyrimidine-methyl-phenyl-L-glutamic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.593 Å
Deposited: 2019-04-12
Authors: Czyzyk, D.J., Anderson, K.S., Valhondo, M., Jorgensen, W.L.
PDB entry 6ojw: Crystal structure of Sphingomonas paucimobilis TMY1009 holo-LsdA
Classification: OXIDOREDUCTASE
Source organism: Sphingomonas paucimobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-04-12
Authors: Kuatsjah, E., Verstraete, M.M., Kobylarz, M.J., Liu, A.K.N., Murphy, M.E.P., Eltis, L.D.
PDB entry 6ojx: PilT4 from Geobacter metallireducens bound to ATP
Classification: MOTOR PROTEIN
Source organism: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2019-04-12
Authors: McCallum, M., Howell, P.L.
PDB entry 6ojy: Methylated PilT4 from Geobacter metallireducens bound to sulfate: C3ocococ conformation
Classification: MOTOR PROTEIN
Source organism: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2019-04-12
Authors: McCallum, M., Howell, P.L.
PDB entry 6ojz: PilT4 from Geobacter metallireducens bound to ADP with partial occupancy: C3ocococ conformation
Classification: MOTOR PROTEIN
Source organism: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.027 Å
Deposited: 2019-04-12
Authors: McCallum, M., Howell, P.L.
PDB entry 6ok0: Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
Classification: HYDROLASE
Source organism: Oxalobacter formigenes OXCC13
Experimental method: X-RAY DIFFRACTION
Resolution: 2.174 Å
Deposited: 2019-04-12
Authors: Chang, C., Tesar, C., Endres, M., Babnigg, G., Hassan, H., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 6ok1: Ltp2-ChsH2(DUF35) aldolase
Classification: TRANSPORT PROTEIN
Source organism: Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NBRC 15933 / NCIMB 10081 / Henssen B9)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-04-12
Authors: Kimber, M.S., Mallette, E., Aggett, R., Seah, S.Y.K.
PDB entry 6ok2: PilT4 from Geobacter metallireducens bound to ADP: C3ocococ conformation
Classification: MOTOR PROTEIN
Source organism: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.287 Å
Deposited: 2019-04-12
Authors: McCallum, M., Howell, P.L.
PDB entry 6ok3: Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
Classification: HYDROLASE
Source organism: Oxalobacter formigenes OXCC13
Experimental method: X-RAY DIFFRACTION
Resolution: 2.353 Å
Deposited: 2019-04-12
Authors: Chang, C., Tesar, C., Endres, M., Babnigg, G., Hassan, H., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 6ok4: Crystal Structure of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from Chlamydia trachomatis with bound NAD
Classification: OXIDOREDUCTASE
Source organism: Chlamydia trachomatis (strain D/UW-3/Cx)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-04-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6ok8: Crystal structure of Staphylococcal nuclease variant Delta+PHS K127L at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-04-12
Authors: Jeliazkov, J.R., Robinson, A.C., Berger, J.M., Garcia-Moreno E., B., Gray, J.G.
PDB entry 6okb: Prohead 2 of the phage T5
Classification: VIRUS LIKE PARTICLE
Source organism: Escherichia phage T5
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2019-04-12
Authors: Huet, A., Duda, R.L., Boulanger, P., Conway, J.F.
PDB entry 6okc: Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C12-crypto Acyl Carrier Protein, AcpP
Classification: TRANSFERASE/LIPID TRANSPORT
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-04-12
Authors: Mindrebo, J.T., Kim, W.E., Bartholow, T.G., Chen, A., Davis, T.D., La Clair, J., Burkart, M.D., Noel, J.P.
PDB entry 6okd: Crystal Structure of human transferrin receptor in complex with a cystine-dense peptide
Classification: TRANSPORT PROTEIN/SIGNALING PROTEIN
Source organism: Homo sapiens; Monosiga brevicollis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-04-12
Authors: Finton, K.A.K., Rupert, P.B., Strong, R.K.
PDB entry 6oke: Crystal structure of an apo Transferrin-Receptor-Binding cystine-dense peptide
Classification: SIGNALING PROTEIN
Source organism: Monosiga brevicollis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2019-04-12
Authors: Rupert, P.B., Strong, R.K.
PDB entry 6okf: Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C16-crypto Acyl Carrier Protein, AcpP
Classification: TRANSFERASE/TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-04-12
Authors: Mindrebo, J.T., Kim, W.E., Bartholow, T.G., Chen, A., Davis, T.D., La Clair, J., Burkart, M.D., Noel, J.P.
PDB entry 6okg: Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabF, and C16-crypto Acyl Carrier Protein, AcpP
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-04-12
Authors: Mindrebo, J.T., Kim, W.E., Bartholow, T.G., Chen, A., Davis, T.D., La Clair, J., Burkart, M.D., Noel, J.P.
PDB entry 6okh: Structure of an uncharacterized protein from Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Classification: UNKNOWN FUNCTION
Source organism: Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-04-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6okj: Native ananain from Ananas comosus
Classification: PLANT PROTEIN
Source organism: Ananas comosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2019-04-13
Authors: Yongqing, T., Wilmann, P.G., Pike, R.N., Wijeyewickrema, L.C.
PDB entry 6okk: Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
Classification: ribosome/inhibitor
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-04-13
Authors: Wong, W., Scheres, S.H.W.
PDB entry 6okm: Human OX40R (TNFRSF4) bound to Fab 3C8
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-14
Authors: Boenig, G., Ultsch, M.H., Harris, S.F.
PDB entry 6okn: OX40R (TNFRSF4) bound to Fab 1A7
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2019-04-14
Authors: Ultsch, M.H., Boenig, G., Harris, S.F.
PDB entry 6oko: Crystal structure of mRIPK3 complexed with N-(3-fluoro-4-{1H-pyrrolo[2,3-b]pyridin-4-yloxy}phenyl)-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3-carboxamide
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-14
Authors: Pokross, M.E.
PDB entry 6okp: B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2019-04-14
Authors: Barnes, C.O., Bjorkman, P.J.
PDB entry 6okq: Crystal structure of the SF12 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2019-04-14
Authors: Barnes, C.O., Bjorkman, P.J.
PDB entry 6okr: CDTb Pre-Insertion form Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Classification: TRANSFERASE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2019-04-15
Authors: Lacy, D.B., Sheedlo, M.J., Anderson, D.M.
PDB entry 6oks: CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Classification: TRANSFERASE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2019-04-15
Authors: Lacy, D.B., Sheedlo, M.J., Anderson, D.M.
PDB entry 6okt: CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Classification: TRANSFERASE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2019-04-15
Authors: Lacy, D.B., Sheedlo, M.J., Anderson, D.M.
PDB entry 6oku: CDTb Double Heptamer Long Form Mask 3 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Classification: TRANSFERASE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-04-15
Authors: Lacy, D.B., Sheedlo, M.J., Anderson, D.M.
PDB entry 6okv: PilT4 from Geobacter metallireducens bound to AMP-PNP: C2ccocco conformation
Classification: MOTOR PROTEIN
Source organism: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.007 Å
Deposited: 2019-04-15
Authors: McCallum, M., Howell, P.L.
PDB entry 6okw: Solution structure of VEK50
Classification: PROTEIN BINDING
Source organism: Streptococcus pyogenes
Experimental method: SOLUTION NMR
Deposited: 2019-04-15
Authors: Yuan, Y., Castellino, F.J.
PDB entry 6okx: Solution structure of VEK50RH1/AA
Classification: PROTEIN BINDING
Source organism: Streptococcus pyogenes
Experimental method: SOLUTION NMR
Deposited: 2019-04-15
Authors: Yuan, Y., Castellino, F.J.
PDB entry 6oky: Solution structure of truncated peptide from PAMap53
Classification: PROTEIN BINDING
Source organism: Streptococcus pyogenes
Experimental method: SOLUTION NMR
Deposited: 2019-04-15
Authors: Yuan, Y., Castellino, F.J.
PDB entry 6okz: Structure of VcINDY bound to Fumarate
Classification: membrane protein, transport protein
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.292 Å
Deposited: 2019-04-15
Authors: Sauer, D.B., Marden, J., Wang, D.N.
PDB entry 6ol0: Structure of VcINDY bound to Malate
Classification: membrane protein, transport protein
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.502 Å
Deposited: 2019-04-15
Authors: Sauer, D.B., Marden, J.J., Wang, D.N.
PDB entry 6ol1: Structure of VcINDY in complex with Succinate
Classification: membrane protein, transport protein
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.088 Å
Deposited: 2019-04-15
Authors: Sauer, D.B., Marden, J.J., Wang, D.N.
PDB entry 6ol2: Crystallography of novel WNK1 and WNK3 inhibitors discovered from high-throughput-screening
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-15
Authors: Chlebowicz, J., Akella, R., Sekulski, K., Humphreys, J.M., Durbacz, M.Z., He, H., Rodan, A., Posner, B., Goldsmith, E.J.
PDB entry 6ol3: Crystal structure of an adenovirus virus-associated RNA
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2019-04-15
Authors: Hood, I.V., Gordon, J.M., Bou-Nader, C., Henderson, F.V., Bahmanjah, S., Zhang, J.
PDB entry 6ol4: Protein Tyrosine Phosphatase 1B (1-301), F182A mutant, apo state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-04-15
Authors: Cui, D.S., Lipchock, J.M., Loria, J.P.
PDB entry 6ol5: Structure of iglb12 Fab in complex with anti-idiotype ib3 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2019-04-15
Authors: Weidle, C., Pancera, M.
PDB entry 6ol6: Structure of iglb12 scFv in complex with anti-idiotype ib2 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-04-15
Authors: Weidle, C., Pancera, M., Gewe, M.
PDB entry 6ol7: Crystal structure of glVRC01 scFv in complex with anti-idiotype iv8 scFv
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.419 Å
Deposited: 2019-04-15
Authors: Weidle, C., Pancera, M.
PDB entry 6ol8: Crystal structure of NDM-12 metallo-beta-lactamase in complex with hydrolyzed ampicillin
Classification: hydrolase/antibiotic
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-16
Authors: Raczynska, J.E., Imiolczyk, B., Jaskolski, M.
PDB entry 6ol9: Structure of the M5 muscarinic acetylcholine receptor (M5-T4L) bound to tiotropium
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.541 Å
Deposited: 2019-04-16
Authors: Vuckovic, Z., Christopoulos, A., Thal, D.M.
PDB entry 6ola: Structure of the PCV2d virus-like particle
Classification: VIRUS LIKE PARTICLE
Source organism: Porcine circovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-04-16
Authors: Khayat, R., Wen, K., Alimova, A., Galarza, J., Gottlieb, P.
PDB entry 6old: CSP1-cyc(Dap6E10)
Classification: BIOSYNTHETIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-04-16
Authors: Yang, Y.
PDB entry 6ole: Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-04-16
Authors: Li, W., Cate, J.H.D.
PDB entry 6olf: Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-04-16
Authors: Li, W., Cate, J.H.D.
PDB entry 6olg: Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-04-16
Authors: Li, W., Cate, J.H.D.
PDB entry 6oli: Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2019-04-16
Authors: Li, W., Cate, J.H.D.
PDB entry 6olj: CryoEM structure of PilB from Geobacter metallireducens: C2ccocco conformation
Classification: MOTOR PROTEIN
Source organism: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.8 Å
Deposited: 2019-04-16
Authors: McCallum, M., Howell, P.L.
PDB entry 6olk: CryoEM structure of PilT4 from Geobacter metallireducens without adding nucleotide: C3ocococ conformation
Classification: MOTOR PROTEIN
Source organism: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2019-04-16
Authors: McCallum, M., Howell, P.L.
PDB entry 6oll: CryoEM structure of PilT4 from Geobacter metallireducens without adding nucleotide: C2oocooc conformation
Classification: MOTOR PROTEIN
Source organism: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2019-04-16
Authors: McCallum, M., Howell, P.L.
PDB entry 6olm: CryoEM structure of PilT4 from Geobacter metallireducens with added ATP: C6cccccc conformation
Classification: MOTOR PROTEIN
Source organism: Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2019-04-16
Authors: McCallum, M., Howell, P.L.
PDB entry 6oln: Controlling the Self-Assembly of Synthetic Metal-Coordinating Coiled-Coil Peptides: Orthorhombic Lattice from a Trimeric Coiled Coil
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-04-16
Authors: Scheib, K.A., Horne, W.S.
PDB entry 6olo: Controlling the Self-Assembly of Synthetic Metal-Coordinating Coiled-Coil Peptides: Hexagonal Lattice from a Trimeric Coiled Coil
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-04-16
Authors: Schieb, K.A., Horne, W.S.
PDB entry 6olp: Full length HIV-1 Env AMC011 in complex with PGT151 Fab
Classification: Viral Protein/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2019-04-16
Authors: Rantalainen, K., Cottrell, C.A.
PDB entry 6olq: Protein Tyrosine Phosphatase 1B (1-301), P188A mutant, apo state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-16
Authors: Cui, D.S., Lipchock, J.M., Loria, J.P.
PDB entry 6olt: Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabF, and C12-crypto Acyl Carrier Protein, AcpP
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-04-17
Authors: Mindrebo, J.T., Kim, W.E., Bartholow, T.G., Chen, A., Davis, T.D., La Clair, J., Burkart, M.D., Noel, J.P.
PDB entry 6olu: RIAM RA-PH core structure in the P212121 space group
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-04-17
Authors: Wu, J.
PDB entry 6olv: Protein Tyrosine Phosphatase 1B (1-301), P185A mutant, apo state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-17
Authors: Cui, D.S., Lipchock, J.M., Loria, J.P.
PDB entry 6olx: Hsp90-alpha S52A bound to PU-11-trans
Classification: CHAPERONE/CHAPERONE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43761 Å
Deposited: 2019-04-17
Authors: Gewirth, D.T., Huck, J.D.
PDB entry 6oly: Full-length MthK channel at 3.1 angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.112 Å
Deposited: 2019-04-17
Authors: Rothberg, B.S.
PDB entry 6olz: Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-04-17
Authors: Li, W., Cate, J.H.D.
PDB entry 6om0: Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-04-17
Authors: Li, W., Cate, J.H.D.
PDB entry 6om1: Crystal structure of an atypical integrin
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2019-04-17
Authors: Wang, J.C., Springer, T.A.
PDB entry 6om2: Crystal structure of atypical integrin alphaV beta8 with proTGF-beta1 ligand peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2019-04-17
Authors: Wang, J.C., Springer, T.A.
PDB entry 6om3: Crystal structure of the Orc1 BAH domain in complex with a nucleosome core particle
Classification: Structural Protein/DNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2019-04-18
Authors: De Ioannes, P.E., Wang, M., Armache, K.-J.
PDB entry 6om4: The structure of Microcin C7 biosynthetic enzyme MccB in complex with N-formylated MccA
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-04-18
Authors: Dong, S.-H., Nair, S.K.
PDB entry 6om5: Structure of a haemophore from Haemophilus haemolyticus
Classification: METAL TRANSPORT
Source organism: Haemophilus haemolyticus M19107
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-04-18
Authors: Torrado, M., Walshe, J.L., Mackay, J.P., Guss, J.M., Gell, D.A.
PDB entry 6om6: Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-04-18
Authors: Hoffer, E.D., Mehrani, A., Keiler, K.C., Stagg, S.M., Dunham, C.M.
PDB entry 6om7: Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-04-18
Authors: Li, W., Cate, J.H.D.
PDB entry 6om8: Caenorhabditis Elegans UDP-Glucose Dehydrogenase in complex with UDP-Xylose
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.449 Å
Deposited: 2019-04-18
Authors: Beattie, N.R., McDonald, W.E., Hicks Sirmans, T.N., Wood, Z.A.
PDB entry 6oma: non-decorated head of the phage T5
Classification: VIRUS
Source organism: Escherichia phage T5
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.2 Å
Deposited: 2019-04-18
Authors: Huet, A., Duda, R.L., Boulanger, P., Conway, J.F.
PDB entry 6omb: Cdc48 Hexamer (Subunits A to E) with substrate bound to the central pore
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-04-18
Authors: Cooney, I., Han, H., Stewart, M., Carson, R.H., Hansen, D., Price, J.C., Hill, C.P., Shen, P.S.
PDB entry 6omc: capsid of T5 virion
Classification: VIRUS
Source organism: Escherichia phage T5
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-04-18
Authors: Huet, A., Duda, R.L., Boulanger, P., Conway, J.F.
PDB entry 6ome: Crystal structure of a probable cytosol aminopeptidase (Leucine aminopeptidase, LAP) from Chlamydia trachomatis D/UW-3/Cx
Classification: HYDROLASE
Source organism: Chlamydia trachomatis (strain D/UW-3/Cx)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-04-18
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6omf: CryoEM structure of SigmaS-transcription initiation complex with activator Crl
Classification: TRANSCRIPTION, Transferase/DNA
Source organism: Escherichia coli; Salmonella typhimurium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2019-04-18
Authors: Jaramillo Cartagena, A., Darst, S.A., Campbell, E.A.
PDB entry 6omg: Structure of mouse CD1D- Glc-DAG (sn-1 C18:0, sn-2 C18:1c9)-iNKT TCR Ternary complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-18
Authors: Dirk, M.Z., Bitra, A., Wang, J.
PDB entry 6omi: Crystal structure of the Legionella effector protein MavL
Classification: HYDROLASE
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.643 Å
Deposited: 2019-04-18
Authors: Cygler, M., Voth, K.
PDB entry 6omk: Crystal structure of a glycylpeptide N-tetradecanoyltransferase (N-myristoyl transferase, NMT) from Leishmania major Friedlin bound to tetradecanoyl-CoA
Classification: TRANSFERASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-18
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6oml: Human BMP chimera BV261
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-04-18
Authors: Seeherman, H., Juo, Z.S.
PDB entry 6omm: Cryo-EM structure of formyl peptide receptor 2/lipoxin A4 receptor in complex with Gi
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2019-04-19
Authors: Zhuang, Y., Liu, H., de Waal, P.W., Zhou, X.E., Wang, L., Meng, X., Zhao, G., Kang, Y., Melcher, K., Xu, H.E., Zhang, C.
PDB entry 6omn: Glycosylated BMP2 homodimer
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2019-04-19
Authors: Juo, Z.S., Seeherman, H.
PDB entry 6omo: Human BMP6 homodimer
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-04-19
Authors: Juo, Z.S., Seeherman, H.
PDB entry 6omp: Crystal structure of apo PtmU3
Classification: OXIDOREDUCTASE
Source organism: Streptomyces platensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-04-19
Authors: Liu, Y.C., Dong, L.B., Shen, B.
PDB entry 6omq: Crystal structure of PtmU3 complexed with PTM substrate
Classification: OXIDOREDUCTASE
Source organism: Streptomyces platensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2019-04-19
Authors: Liu, Y.C., Dong, L.B., Shen, B.
PDB entry 6omr: Crystal structure of PtmU3 complexed with PTN substrate
Classification: OXIDOREDUCTASE
Source organism: Streptomyces platensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2019-04-19
Authors: Liu, Y.C., Dong, L.B., Shen, B.
PDB entry 6oms: Arabidopsis GH3.12 with Chorismate
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.942 Å
Deposited: 2019-04-19
Authors: Zubieta, C., Westfall, C.S., Holland, C.K., Jez, J.M.
PDB entry 6omt: HIV-1 capsid hexamer R18D mutant
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.052 Å
Deposited: 2019-04-19
Authors: Huang, P., Summers, B.J., Xiong, Y.
PDB entry 6omu: Structure of human Bruton's Tyrosine Kinase in complex with Evobrutinib
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2019-04-19
Authors: Mochalkin, I., Gardberg, A.S.
PDB entry 6omv: CryoEM structure of the LbCas12a-crRNA-AcrVA4-DNA complex
Classification: UNKNOWN FUNCTION/DNA/RNA
Source organism: Lachnospiraceae bacterium ND2006; Moraxella bovoculi; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-04-19
Authors: Chang, L., Li, Z., Zhang, H.
PDB entry 6omw: Structure of Aedes aegypti OBP22 in the complex with palmitoleic acid
Classification: TRANSPORT PROTEIN
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-19
Authors: Jones, D.N., Wang, J.
PDB entry 6omx: Crystal structure of alr5209, a pentapeptide repeat protein from Nostoc Pcc 7120, determined at 1.7 Angstrom resolution
Classification: UNKNOWN FUNCTION
Source organism: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2019-04-19
Authors: Kennedy, M.A., Zhang, R.
PDB entry 6omy: Protein Tyrosine Phosphatase 1B (1-301), P180A mutant, apo state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-19
Authors: Cui, D.S., Lipchock, J.M., Loria, J.P.
PDB entry 6omz: Crystal Structure of Dihydropteroate synthase from Mycobacterium smegmatis with bound 6-hydroxymethylpterin-monophosphate
Classification: LIGASE
Source organism: Mycobacterium smegmatis (strain MKD8)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-04-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6on0: STRUCTURE OF N15 CRO COMPLEXED WITH CONSENSUS OPERATOR DNA
Classification: transcription/dna
Source organism: Escherichia phage N15; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-04-19
Authors: Hall, B.M., Roberts, S.A., Cordes, M.H.J.
PDB entry 6on1: A resting state structure of L-DOPA dioxygenase from Streptomyces sclerotialus
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sclerotialus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.982 Å
Deposited: 2019-04-19
Authors: Wang, Y., Shin, I., Fu, Y., Colabroy, K., Liu, A.
PDB entry 6on2: Lon Protease from Yersinia pestis with Y2853 substrate
Classification: HYDROLASE
Source organism: Yersinia pestis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2019-04-19
Authors: Shin, M., Asmita, A., Puchades, C., Adjei, E., Wiseman, R.L., Karzai, A.W., Lander, G.C.
PDB entry 6on3: A substrate bound structure of L-DOPA dioxygenase from Streptomyces sclerotialus
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sclerotialus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2019-04-19
Authors: Wang, Y., Shin, I., Fu, Y., Colabroy, K., Liu, A.
PDB entry 6on4: Crystal structure of the GntR-type sialoregulator NanR from Escherichia coli, in complex with sialic acid
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-04-19
Authors: Horne, C.R., Panjikar, S., North, R.A., Dobson, R.C.J.
PDB entry 6on5: Crystal Structure of the Zn-bound Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57H Mutant of Human Cellular Retinol Binding Protein II
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.638 Å
Deposited: 2019-04-20
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 6on6: Crystal Structure of the RIG-5 IG1 homodimer
Classification: CELL ADHESION
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.423 Å
Deposited: 2019-04-20
Authors: Cheng, S., Kurleto, J.D., Ozkan, E.
PDB entry 6on7: Crystal Structure of Apo Domain-Swapped Dimer Q108K:T51D:A28C:L36C Mutant of Human Cellular Retinol Binding Protein II
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.981 Å
Deposited: 2019-04-20
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 6on8: Crystal Structure of the Reduced Form of Apo Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57H Mutant of Human Cellular Retinol Binding Protein II
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.395 Å
Deposited: 2019-04-20
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 6on9: Crystal Structure of the ZIG-8-RIG-5 IG1-IG1 heterodimer, tetragonal form
Classification: CELL ADHESION
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.995 Å
Deposited: 2019-04-20
Authors: Cheng, S., Kurleto, J.D., Ozkan, E.
PDB entry 6ona: Crystal structure of Influenza hemagglutinin from strain A/Hickox/JY2/1940
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Hickox/1940 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-04-20
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6onb: Crystal Structure of the ZIG-8-RIG-5 IG1-IG1 heterodimer, monoclinic form
Classification: CELL ADHESION
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.696 Å
Deposited: 2019-04-20
Authors: Cheng, S., Kurleto, J.D., Ozkan, E.
PDB entry 6onc: Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase produced without CooC, as-isolated
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-04-21
Authors: Wittenborn, E.C., Cohen, S.E., Drennan, C.L.
PDB entry 6ond: Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase produced without CooC, reduced
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.723 Å
Deposited: 2019-04-21
Authors: Wittenborn, E.C., Cohen, S.E., Drennan, C.L.
PDB entry 6one: Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-III-188-A01.
Classification: viral protein/inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-04-22
Authors: Tolbert, W.D., Sherburn, R., Pazgier, M.
PDB entry 6onf: Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-III-188-A02.
Classification: viral protein/inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.842 Å
Deposited: 2019-04-22
Authors: Tolbert, W.D., Sherburn, R., Pazgier, M.
PDB entry 6ong: Dehaloperoxidate B in complex with substrate 4-F-cresol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2019-04-22
Authors: Ghiladi, R.A., de Serrano, V.S., Malewschik, T., McGuire, A.
PDB entry 6onh: Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-IV-031-A05.
Classification: viral protein/inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.244 Å
Deposited: 2019-04-22
Authors: Tolbert, W.D., Sherburn, R., Pazgier, M.
PDB entry 6oni: Crystal structure of PPARgamma ligand binding domain in complex with N-CoR peptide and inverse agonist T0070907
Classification: transcription/agonist
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-04-22
Authors: Shang, J., Kojetin, D.J.
PDB entry 6onj: Crystal structure of PPARgamma ligand binding domain in complex with TRAP220 peptide and agonist rosiglitazone
Classification: transcription/agonist
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-04-22
Authors: Shang, J., Kojetin, D.J.
PDB entry 6onk: Dehaloperoxidase B in complex with substrate 4-Cl-cresol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-04-22
Authors: Ghiladi, R.A., de Serrano, V.S., Malewschik, T.
PDB entry 6onm: Crystal Structure of (+)-Limonene Synthase Complexed with 8,9-Difluorolinalyl Diphosphate
Classification: LYASE
Source organism: Citrus sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-04-22
Authors: Prem Kumar, R., Morehouse, B.R., Yu, Q., Oprian, D.D.
PDB entry 6onn: Crystal structure of 8-amino-7-oxononanoate synthase from Burkholderia phymatum
Classification: TRANSFERASE
Source organism: Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-04-22
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6ono: Complex structure of WhiB1 and region 4 of SigA in C2221 space group
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-04-22
Authors: Wan, T., Li, S.R., Beltran, D.G., Schacht, A., Becker, D.C., Zhang, L.M.
PDB entry 6onp: Crystal structure of periplasmic binding protein XoxJ from Methylobacterium extorquens AM1
Classification: UNKNOWN FUNCTION
Source organism: Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2019-04-22
Authors: Rose, H.R., Taylor, E.M., Boal, A.K.
PDB entry 6onq: Crystal structure of c-type cytochrome XoxG from Methylobacterium extorquens AM1
Classification: ELECTRON TRANSPORT
Source organism: Methylobacterium extorquens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2019-04-22
Authors: McBride, M.J., Featherston, E.R., Boal, A.K.
PDB entry 6onr: Dehaloperoxidase B in complex with substrate 4-methyl-cresol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2019-04-22
Authors: Ghiladi, R.A., de Serrano, V.S., Malewschik, T.
PDB entry 6ons: Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase with the D-cluster ligating cysteines mutated to alanines, coexpressed with CooC, as-isolated
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.485 Å
Deposited: 2019-04-22
Authors: Cohen, S.E., Wittenborn, E.C., Drennan, C.L.
PDB entry 6ont: Structure of the Francisella response regulator 1452 receiver domain
Classification: TRANSCRIPTION
Source organism: Francisella tularensis subsp. novicida (strain U112)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.803 Å
Deposited: 2019-04-22
Authors: Milton, M.E., Cavanagh, J.
PDB entry 6onu: Complex structure of WhiB1 and region 4 of SigA in P21 space group.
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-04-22
Authors: Wan, T., Li, S.R., Beltran, D.G., Schacht, A., Becker, D.C., Zhang, L.M.
PDB entry 6onv: Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-III-027-D05.
Classification: viral protein/inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.253 Å
Deposited: 2019-04-22
Authors: Tolbert, W.D., Sherburn, R., Pazgier, M.