LiteFold/PDB huggingface dataset:
PDB entry 7wdk: The structure of PldA-PA3488 complex
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2021-12-21
Authors: Zhao, L., Yang, X.Y., Li, Z.Q.
PDB entry 7wdl: Fungal immunomodulatory protein FIP-nha
Classification: IMMUNE SYSTEM
Source organism: Fusarium solani
Experimental method: X-RAY DIFFRACTION
Resolution: 1.903 Å
Deposited: 2021-12-22
Authors: Liu, Y., Bastiaan-Net, S., Zhang, Y., Hoppenbrouwers, T., Xie, Y., Wang, Y., Wei, X., Du, G., Zhang, H., Imam, K.M.S.U., Wichers, H.J., Li, Z.
PDB entry 7wdm: Fungal immunomodulatory protein FIP-gmi
Classification: IMMUNE SYSTEM
Source organism: Ganoderma microsporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.123 Å
Deposited: 2021-12-22
Authors: Liu, Y., Bastiaan-Net, S., Zhang, Y., Hoppenbrouwers, T., Xie, Y., Wang, Y., Wei, X., Du, G., Zhang, H., Imam, K.M.S.U., Wichers, H.J., Li, Z.
PDB entry 7wdn: Crystal structures of MeBglD2 in complex with various saccharides
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-12-22
Authors: Watanabe, M., Matsuzawa, T., Nakamichi, Y., Akita, H., Yaoi, K.
PDB entry 7wdo: Crystal structures of MeBglD2 in complex with various saccharides
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2021-12-22
Authors: Watanabe, M., Matsuzawa, T., Nakamichi, Y., Akita, H., Yaoi, K.
PDB entry 7wdp: Crystal structures of MeBglD2 in complex with various saccharides
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-12-22
Authors: Watanabe, M., Matsuzawa, T., Nakamichi, Y., Akita, H., Yaoi, K.
PDB entry 7wdq: DsyB in complex with SAM
Classification: TRANSFERASE
Source organism: Nisaea denitrificans DSM 18348
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-12-22
Authors: Li, C.Y.
PDB entry 7wdr: Crystal structures of MeBglD2 in complex with various saccharides
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-12-22
Authors: Watanabe, M., Matsuzawa, T., Nakamichi, Y., Akita, H., Yaoi, K.
PDB entry 7wds: Crystal structures of MeBglD2 in complex with various saccharides
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2021-12-22
Authors: Watanabe, M., Matsuzawa, T., Nakamichi, Y., Akita, H., Yaoi, K.
PDB entry 7wdt: 6-sulfo-beta-D-N-acetylglucosaminidase from Bifidobacterium bifidum in complex with GlcNAc-6S
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum JCM 1254
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-12-22
Authors: Yamada, C., Kashima, T., Fushinobu, S., Katoh, T., Katayama, T.
PDB entry 7wdu: 6-sulfo-beta-D-N-acetylglucosaminidase from Bifidobacterium bifidum in complex with PUGNAc-6S
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum JCM 1254
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2021-12-22
Authors: Kashima, T., Yamada, C., Fushinobu, S., Katoh, T., Katayama, T.
PDB entry 7wdv: Crystal structures of MeBglD2 in complex with various saccharides
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.812 Å
Deposited: 2021-12-22
Authors: Watanabe, M., Matsuzawa, T., Nakamichi, Y., Akita, H., Yaoi, K.
PDB entry 7wdw: DsyB in complex with SAH and MTHB
Classification: TRANSFERASE
Source organism: Nisaea denitrificans DSM 18348
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-12-22
Authors: Li, C.Y.
PDB entry 7we3: Solution structures of a disulfide-rich peptide that can bind CD28
Classification: PEPTIDE BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2021-12-22
Authors: Fan, S.H., Wu, Y.P., Wu, C.L.
PDB entry 7we4: Human Nav1.8 with A-803467, class I
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-12-22
Authors: Yan, N., Pan, X.J., Huang, X.S., Huang, G.X.
PDB entry 7we5: The 0.87 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with oleic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.87 Å
Deposited: 2021-12-22
Authors: Sugiyama, S., Matsuoka, S., Tsuchikawa, H., Sonoyama, M., Inoue, Y., Hayashi, F., Murata, M.
PDB entry 7we6: Structure of Csy-AcrIF24-dsDNA
Classification: VIRAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-12-22
Authors: Zhang, L., Feng, Y.
PDB entry 7we7: SARS-CoV-2 Omicron variant spike protein in complex with Fab XGv282
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-12-23
Authors: Wang, X., Wang, L.
PDB entry 7we8: SARS-CoV-2 Omicron variant spike protein in complex with Fab XGv265
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-12-23
Authors: Wang, X., Wang, L.
PDB entry 7we9: SARS-CoV-2 Omicron variant spike protein in complex with Fab XGv289
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-12-23
Authors: Wang, X., Wang, L.
PDB entry 7wea: SARS-CoV-2 Omicron variant spike protein in complex with two XGv347 binding to one close state RBD and one open state RBD
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-12-23
Authors: Wang, X., Wang, L.
PDB entry 7web: SARS-CoV-2 Omicron variant spike protein with two XGv347 binding to two open state RBDs
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-12-23
Authors: Wang, X., Wang, L.
PDB entry 7wec: SARS-CoV-2 Omicron variant spike protein with three XGv347 Fabs binding to three closed state RBDs
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-12-23
Authors: Wang, X., Wang, L.
PDB entry 7wed: SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv347
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-12-23
Authors: Wang, X., Wang, L.
PDB entry 7wee: SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv265
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-12-23
Authors: Wang, X., Wang, L.
PDB entry 7wef: SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv289
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-12-23
Authors: Wang, X., Wang, L.
PDB entry 7weg: Complex structure of PDZD7 and FCHSD2
Classification: LIPID BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-12-23
Authors: Wang, H., Lin, L., Lu, Q.
PDB entry 7wei: Solution structures of a disulfide-rich peptide that can bind CD28
Classification: PEPTIDE BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2021-12-23
Authors: Fan, S.H., Wu, Y.P., Wu, C.L.
PDB entry 7wej: Crystal structure of the mouse Wdr47 NTD.
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2021-12-23
Authors: Ren, J.Q., Li, D., Feng, W.
PDB entry 7wek: Crystal structure of the mouse Wdr47 NTD in complex with the WBR motif form Camsap3.
Classification: PROTEIN BINDING
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2021-12-23
Authors: Ren, J.Q., Li, D., Feng, W.
PDB entry 7wel: Human Nav1.8 with A-803467, class II
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-12-23
Authors: Yan, N., Pan, X.J., Huang, X.S., Huang, G.X.
PDB entry 7wem: Solid-state NMR Structure of TFo c-Subunit Ring
Classification: PROTON TRANSPORT
Source organism: Bacillus sp. PS3
Experimental method: SOLID-STATE NMR
Deposited: 2021-12-23
Authors: Akutsu, H., Todokoro, Y., Kang, S.-J., Suzuki, T., Yoshida, M., Ikegami, T., Fujiwara, T.
PDB entry 7wet: Crystal structure of Peroxiredoxin I in complex with the inhibitor Cela
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2021-12-24
Authors: Zhang, H., Luo, C.
PDB entry 7weu: Crystal structure of Peroxiredoxin I in complex with compound 19-048
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2021-12-24
Authors: Zhang, H., Luo, C.
PDB entry 7wev: SARS-COV-2 BETA VARIANT SPIKE PROTEIN IN TRANSITION STATE
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-12-24
Authors: Xu, C., Cong, Y.
PDB entry 7wew: Structure of adenylation domain of epsilon-poly-L-lysine synthase
Classification: LIGASE
Source organism: Streptomyces albulus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-12-24
Authors: Okamoto, T., Yamanaka, K., Hamano, Y., Nagano, S., Hino, T.
PDB entry 7wex: The crystal structure of substrate-free CYP107X1 from Streptomyces avermitilis
Classification: OXIDOREDUCTASE
Source organism: Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-12-24
Authors: Xu, L.-H., Lin, S., Gao, L.
PDB entry 7wez: Crystal structure of RRM domain of Cyclophilin 33-like protein of Plasmodium falciparum
Classification: RNA BINDING PROTEIN
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-12-24
Authors: Verma, G., Bhavesh, N.S.
PDB entry 7wf0: The 0.83 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with nervonic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.83 Å
Deposited: 2021-12-24
Authors: Sugiyama, S., Kakinouchi, K., Nakano, R., Matsuoka, S., Tsuchikawa, H., Sonoyama, M., Inoue, Y., Hayashi, F., Murata, M.
PDB entry 7wf3: Composite map of human Kv1.3 channel in apo state with beta subunits
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-12-25
Authors: Tyagi, A., Ahmed, T., Jian, S., Bajaj, S., Ong, S.T., Goay, S.S.M., Zhao, Y., Vorobyov, I., Tian, C., Chandy, K.G., Bhushan, S.
PDB entry 7wf4: Composite map of human Kv1.3 channel in dalazatide-bound state with beta subunits
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-12-25
Authors: Tyagi, A., Ahmed, T., Jian, S., Bajaj, S., Ong, S.T., Goay, S.S.M., Zhao, Y., Vorobyov, I., Tian, C., Chandy, K.G., Bhushan, S.
PDB entry 7wf5: c-Src in complex with ponatinib
Classification: ONCOPROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.798 Å
Deposited: 2021-12-26
Authors: Guo, M., Duan, Y., Dai, S., Chen, X., Chen, Y.
PDB entry 7wf6: Crystal structure of SNX13 RGS domain
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2021-12-26
Authors: Xu, J., Zhu, J., Liu, J.
PDB entry 7wf7: Cryo-EM of Sphingosine 1-phosphate receptor 1 / Gi complex bound to S1P
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-12-26
Authors: He, Y., Xu, Z.
PDB entry 7wf8: Crystal structure of mouse SNX25 RGS domain in space group P212121
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2021-12-26
Authors: Zhang, Y., Xu, J., Liu, J.
PDB entry 7wf9: Crystal structure of mouse SNX25 RGS domain in space group P41212
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-12-26
Authors: Zhang, Y., Xu, J., Liu, J.
PDB entry 7wfc: X-ray structure of HKU1-PLP2(Cys109Ser) catalytic mutant in complex with free ubiquitin
Classification: HYDROLASE
Source organism: Homo sapiens; Human coronavirus HKU1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-12-26
Authors: Xiong, Y.X., Fu, Z.Y., Huang, H.
PDB entry 7wfd: Left PSI in the cyclic electron transport supercomplex NDH-PSI from Arabidopsis
Classification: ELECTRON TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2021-12-26
Authors: Pan, X., Li, M.
PDB entry 7wfe: Right PSI in the cyclic electron transfer supercomplex NDH-PSI from Arabidopsis
Classification: ELECTRON TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2021-12-26
Authors: Pan, X.W., Li, M.
PDB entry 7wff: Subcomplexes B,M and L in the Cylic electron transfer supercomplex NDH-PSI from Arabidopsis
Classification: ELECTRON TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2021-12-26
Authors: Pan, X.W., Li, M.
PDB entry 7wfg: Subcomplexes A and E in NDH complex from Arabidopsis
Classification: ELECTRON TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.33 Å
Deposited: 2021-12-26
Authors: Pan, X.W., Li, M.
PDB entry 7wfr: Human Nav1.8 with A-803467, class III
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-12-27
Authors: Yan, N., Pan, X.J., Huang, X.S., Huang, G.X.
PDB entry 7wfs: Acyl-Coenzyme A Binding Protein 103 (LMJF_17_0620) of Leishmania major in triclinic crystal form
Classification: LIPID BINDING PROTEIN
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-12-27
Authors: Verma, S., Sundd, M.
PDB entry 7wfw: Apo human Nav1.8
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-12-27
Authors: Yan, N., Pan, X.J., Huang, X.S., Huang, G.X.
PDB entry 7wfx: EVAA-KlAte1
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-12-27
Authors: Kim, M.K., Kim, B.H., Oh, S.-J., Song, H.K.
PDB entry 7wfy: Crystal Structure of the VAV2 SH2 domain in complex with APP phosphorylated peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.449 Å
Deposited: 2021-12-27
Authors: Zhang, Y.J., Liu, Y.R., Wu, B.
PDB entry 7wg0: Structure of the Manganese Protoporphyrin IX-Reconstituted CYP102A1 Heme Domain with N-palmitoyl-L-phenylalanine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-12-27
Authors: Keita, O., Osami, S., Yuichiro, A., Hiroshi, S.
PDB entry 7wg1: DVAA-KlAte1
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2021-12-27
Authors: Kim, M.K., Kim, B.H., Oh, S.-J., Song, H.K.
PDB entry 7wg2: EVAA-KlAte1
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2021-12-28
Authors: Kim, M.K., Kim, B.H., Oh, S.-J., Song, H.K.
PDB entry 7wg3: Structural basis of interleukin-17B receptor in complex with a neutralizing antibody D9 for guiding humanization and affinity maturation for cancer therapy
Classification: IMMUNE SYSTEM
Source organism: Bos taurus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2021-12-28
Authors: Lee, W.H., Chen, X.R., Liu, I.J., Lee, J.H., Hu, C.M., Wu, H.C., Wang, S.K., Lee, W.H., Ma, C.
PDB entry 7wg4: DVAA-KlAte1
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2021-12-28
Authors: Kim, M.K., Kim, B.H., Oh, S.-J., Song, H.K.
PDB entry 7wg5: Cyclic electron transport supercomplex NDH-PSI from Arabidopsis
Classification: ELECTRON TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2021-12-28
Authors: Pan, X.W., Li, M.
PDB entry 7wg6: Neutral Omicron Spike Trimer
Classification: STRUCTURAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-12-28
Authors: Cui, Z., Wang, X.
PDB entry 7wg7: Acidic Omicron Spike Trimer
Classification: STRUCTURAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-12-28
Authors: Cui, Z.
PDB entry 7wg8: Delta Spike Trimer(3 RBD Down)
Classification: STRUCTURAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-12-28
Authors: Cui, Z.
PDB entry 7wg9: Delta Spike Trimer(1 RBD Up)
Classification: STRUCTURAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-12-28
Authors: Cui, Z.
PDB entry 7wga: 2.2 ANGSTROMS RESOLUTION STRUCTURE ANALYSIS OF TWO REFINED N-ACETYLNEURAMINYLLACTOSE-WHEAT GERM AGGLUTININ ISOLECTIN COMPLEXES
Classification: LECTIN (AGGLUTININ)
Source organism: Triticum aestivum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 1990-04-03
Authors: Wright, C.S.
PDB entry 7wgb: Neutral Omicron Spike Trimer in complex with ACE2
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-12-28
Authors: Cui, Z.
PDB entry 7wgc: Neutral Omicron Spike Trimer in complex with ACE2.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-12-28
Authors: Cui, Z.
PDB entry 7wgd: X-ray structure of thermostabilized Drosophila dopamine transporter with GABA transporter1-like substitutions in the binding site, in substrate-free form.
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-12-28
Authors: Joseph, D., Penmatsa, A.
PDB entry 7wge: Human NLRP1 complexed with thioredoxin
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Spodoptera frugiperda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-12-28
Authors: Zhang, Z., Ohto, U., Shimizu, T.
PDB entry 7wgh: Crystal structure of AflSQS from Aspergillus flavus in complex with FSPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2021-12-28
Authors: Shang, N., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 7wgi: Crystal structure of AflSQS from Aspergillus flavus
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-12-28
Authors: Shang, N., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 7wgk: Crystal structure of Adenosine triphosphate phosphoribosyltransferase (HisG) from Acinetobacter baumannii at 3.13 A resolution
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.13 Å
Deposited: 2021-12-28
Authors: Ahmad, N., Maurya, A., Singh, P.K., Viswanathan, V., Sharma, P., Singh, T.P., Sharma, S.
PDB entry 7wgl: X-ray structure of human PPAR delta ligand binding domain-bezafibrate co-crystals obtained by co-crystallization
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.091 Å
Deposited: 2021-12-28
Authors: Kamata, S., Honda, A., Machida, Y., Uchii, K., Shiiyama, Y., Masuda, R., Oyama, T., Ishii, I.
PDB entry 7wgm: Crystal structure of Adenosine triphosphate phosphoribosyltransferase (HisG) from Acinetobacter baumannii at 3.15 A resolution
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2021-12-28
Authors: Ahmad, N., Maurya, A., Singh, P.K., Viswanathan, V., Sharma, P., Singh, T.P., Sharma, S.
PDB entry 7wgn: X-ray structure of human PPAR delta ligand binding domain-pemafibrate co-crystals obtained by co-crystallization
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.813 Å
Deposited: 2021-12-28
Authors: Kamata, S., Honda, A., Akahane, M., Machida, Y., Uchii, K., Shiiyama, Y., Masuda, R., Oyama, T., Ishii, I.
PDB entry 7wgo: X-ray structure of human PPAR gamma ligand binding domain-bezafibrate co-rystals obtained by co-crystallization
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2021-12-28
Authors: Kamata, S., Honda, A., Akahane, M., Machida, Y., Uchii, K., Shiiyama, Y., Masuda, R., Oyama, T., Ishii, I.
PDB entry 7wgp: X-ray structure of human PPAR gamma ligand binding domain-fenofibric acid co-crystals obtained by co-crystallization
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2021-12-28
Authors: Kamata, S., Honda, A., Akahane, M., Machida, Y., Uchii, K., Shiiyama, Y., Masuda, R., Oyama, T., Ishii, I.
PDB entry 7wgq: X-ray structure of human PPAR gamma ligand binding domain-pemafibrate co-crystals obtained by co-crystallization
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2021-12-28
Authors: Kamata, S., Honda, A., Akahane, M., Machida, Y., Uchii, K., Shiiyama, Y., Masuda, R., Oyama, T., Ishii, I.
PDB entry 7wgr: Cryo-electron microscopic structure of the 2-oxoglutarate dehydrogenase (E1) component of the human alpha-ketoglutarate (2-oxoglutarate) dehydrogenase complex
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2021-12-28
Authors: Yu, X., Yang, W., Zhong, Y.H., Ma, X.M., Gao, Y.Z.
PDB entry 7wgs: Structure of ClpP from Staphylococcus aureus in complex with (S)-ZG197
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2021-12-28
Authors: Yang, C.-G., Gan, J.H.
PDB entry 7wgt: X-ray structure of thermostabilized Drosophila dopamine transporter with GABA transporter1-like substitutions in the binding site, in complex with NO711.
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2021-12-28
Authors: Joseph, D., Penmatsa, A.
PDB entry 7wgu: Crystal structure of metal-binding protein EfeO from Escherichia coli
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-12-29
Authors: Nakatsuji, S., Takase, R., Mikami, B., Hashimoto, W.
PDB entry 7wgv: SARS-CoV-2 spike glycoprotein trimer in closed state
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-12-29
Authors: Zhu, Y., Tai, L., Yin, G., Sun, F.
PDB entry 7wgw: NMR Solution Structure of a cGMP Fill-in Vacancy G-quadruplex Formed in the Oxidized BLM Gene Promoter
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2021-12-29
Authors: Wang, K.B., Liu, Y., Li, Y., Li, J., Dickerhoff, J., Yang, M.H., Yang, D., Kong, L.Y.
PDB entry 7wgx: SARS-CoV-2 spike glycoprotein trimer in closed state after treatment with Cathepsin L
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-12-29
Authors: Zhu, Y., Tai, L., Yin, G., Sun, F.
PDB entry 7wgy: SARS-CoV-2 spike glycoprotein trimer in Intermediate state
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-12-29
Authors: Zhu, Y., Tai, L., Yin, G., Sun, F.
PDB entry 7wgz: SARS-CoV-2 spike glycoprotein trimer in open state
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2021-12-29
Authors: Zhu, Y., Tai, L., Yin, G., Sun, F.
PDB entry 7wh0: structure of C elegans BCMO-1
Classification: METAL BINDING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-12-29
Authors: Pan, W., Liu, L.
PDB entry 7wh1: structure of C elegans BCMO-2
Classification: METAL BINDING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-12-29
Authors: Pan, W., Liu, L.
PDB entry 7wh3: Solution structure of human stomatin SPFH domain in a phosphate buffer
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-12-29
Authors: Kataoka, K., Tenno, T., Goda, N., Hibino, E., Hiroaki, H.
PDB entry 7wh4: Crystal structure of the PadR-family transcriptional regulator Rv3488 of Mycobacterium tuberculosis H37Rv in complex with Manganese ion
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-12-29
Authors: Arora, A., Zohib, M., Biswal, B.K., Pal, R.K.
PDB entry 7wh5: Crystal structure of human ClpP in complex with ZG180
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2021-12-29
Authors: Wei, B.Y., Gan, J.H., Yang, C.-G.
PDB entry 7wh6: The mutant crystal structure of b-1,4-Xylanase (XynAF1_N179S)
Classification: HYDROLASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2021-12-30
Authors: Li, G.Q., Zhang, R.F.
PDB entry 7wh7: The mutant crystal structure of b-1,4-Xylanase (XynAF1_N179S) with xylotetraose
Classification: HYDROLASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2021-12-30
Authors: Li, G.Q., Zhang, R.F.
PDB entry 7wh8: SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (focused refinement on Fab-RBD)
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2021-12-30
Authors: Zeng, J.W.
PDB entry 7wh9: holo structure of emodin 1-OH O-methyltransferase complex with emodin and S-Adenosyl-L-homocysteine
Classification: TRANSFERASE
Source organism: Aspergillus terreus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.803 Å
Deposited: 2021-12-30
Authors: Liang, Y.J., Lu, X.F., Qi, F.F., Xue, Y.Y.
PDB entry 7wha: The mutant crystal structure of b-1,4-Xylanase (XynAF1_R246K)
Classification: HYDROLASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2021-12-30
Authors: Li, G.Q., Zhang, R.F.
PDB entry 7whb: SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2021-12-30
Authors: Zeng, J.W., Ge, J.W., Wang, X.Q.
PDB entry 7whc: Crystal structure of SARS-CoV-2 3CLpro catalytic domain
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.269 Å
Deposited: 2021-12-30
Authors: Shin, D.H., Jo, S.R.
PDB entry 7whd: SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2021-12-30
Authors: Zeng, J.W., Wang, X.W., Ge, J.W., Wang, Z.Y.
PDB entry 7whe: The mutant crystal structure of b-1,4-Xylanase (XynAF1_R246K) with xylobiose
Classification: HYDROLASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-12-30
Authors: Li, G.Q., Zhang, R.F.
PDB entry 7whf: Heimdallarchaeota gelsolin (2DGel) bound to rabbit actin
Classification: STRUCTURAL PROTEIN
Source organism: Candidatus Heimdallarchaeota archaeon LC_3; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-12-30
Authors: Robinson, R.C., Akil, C.
PDB entry 7whg: Lokiarchaeota gelsolin (2DGel) bound to two molecules of rabbit actin
Classification: STRUCTURAL PROTEIN
Source organism: Candidatus Lokiarchaeota archaeon; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2021-12-30
Authors: Robinson, R.C., Akil, C.
PDB entry 7whh: Crystal structure of SARS-CoV-2 omicron RBD and human ACE2
Classification: HYDROLASE/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-12-30
Authors: Wang, X.Q., Lan, J.
PDB entry 7whi: The state 2 complex structure of Omicron spike with Bn03 (2-up RBD, 4 nanobodies)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2021-12-30
Authors: Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
PDB entry 7whj: The state 1 complex structure of Omicron spike with Bn03 (1-up RBD, 3 nanobodies)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2021-12-30
Authors: Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
PDB entry 7whk: The state 3 complex structure of Omicron spike with Bn03 (2-up RBD, 5 nanobodies)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2021-12-30
Authors: Zhan, W.Q., Zhang, X., Chen, Z.G., Sun, L.
PDB entry 7whm: Closed spike of Bombyx mori cytoplasmic polyhedrosis virus
Classification: VIRAL PROTEIN
Source organism: Bombyx mori cypovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-12-31
Authors: Zhang, Y., Cui, Y., Sun, J., Zhou, Z.H.
PDB entry 7whn: Opened spike of Bombyx mori cytoplasmic polyhedrosis virus
Classification: VIRAL PROTEIN
Source organism: Bombyx mori cypovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-12-31
Authors: Zhang, Y., Cui, Y., Sun, J., Zhou, Z.H.
PDB entry 7whp: Pentameric turret of Bombyx mori cytoplasmic polyhedrosis virus after spike detaches.
Classification: VIRAL PROTEIN
Source organism: Bombyx mori cypovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-12-31
Authors: Zhang, Y., Cui, Y., Sun, J., Zhou, Z.H.
PDB entry 7whr: Cryo-EM Structure of Leishmanial GDP-mannose pyrophosphorylase
Classification: SUGAR BINDING PROTEIN
Source organism: Leishmania donovani
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-12-31
Authors: Xu, W., Li, H., Huang, C.
PDB entry 7whs: Cryo-EM Structure of Leishmanial GDP-mannose pyrophosphorylase in complex with GTP
Classification: SUGAR BINDING PROTEIN
Source organism: Leishmania donovani
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-12-31
Authors: Xu, W., Li, H., Huang, C.
PDB entry 7wht: Cryo-EM Structure of Leishmanial GDP-mannose pyrophosphorylase in complex with GDP-Mannose
Classification: SUGAR BINDING PROTEIN
Source organism: Leishmania donovani
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-12-31
Authors: Xu, W., Li, H., Huang, C.
PDB entry 7whu: Human Neutrophil Elastase in-complex with Ecotin Peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2021-12-31
Authors: Shankar, S., Jayaraman, S.
PDB entry 7whv: Cryo-EM structure of Dnf1 from Saccharomyces cerevisiae in detergent with beryllium fluoride (E2P state)
Classification: LIPID TRANSPORT
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-12-31
Authors: Xu, J., He, Y., Wu, X., Li, L.
PDB entry 7whw: Cryo-EM structure of Dnf1 from Saccharomyces cerevisiae in detergent with AMPPCP (E1-ATP state)
Classification: LIPID TRANSPORT
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-12-31
Authors: Xu, J., He, Y., Wu, X., Li, L.
PDB entry 7whz: SARS-CoV-2 spike protein in complex with three human neutralizing antibodies
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2022-01-01
Authors: Zheng, Q., Li, S., Sun, H., Zheng, Z., Wang, S.
PDB entry 7wi0: SARS-CoV-2 Omicron variant spike in complex with three human neutralizing antibodies
Classification: VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.82 Å
Deposited: 2022-01-01
Authors: Zheng, Q., Li, S., Sun, H., Zheng, Z., Wang, S.
PDB entry 7wi1: The mutant variant of PNGM-1, H93 was substituuted for alanine to study metal coordination
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2022-01-01
Authors: Park, Y.S., Kang, L.W., Lee, J.H.
PDB entry 7wi3: Cryo-EM structure of E.Coli FtsH-HflkC AAA protease complex
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-01-02
Authors: Qiao, Z., Gao, Y.G.
PDB entry 7wi4: Cryo-EM structure of E.Coli FtsH protease cytosolic domains
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-01-02
Authors: Qiao, Z., Gao, Y.G.
PDB entry 7wi6: Cryo-EM structure of LY341495/NAM-bound mGlu3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2022-01-03
Authors: Fang, W., Yang, F., Xu, C.J., Ling, S.L., Lin, L., Zhou, Y.X., Sun, W.J., Wang, X.M., Liu, P., Rondard, P., Pan, S., Pin, J.P., Tian, C.L., Liu, J.F.
PDB entry 7wi7: Crystal structure of human MCM8/9 complex
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 6.6 Å
Deposited: 2022-01-03
Authors: Li, J., Liu, Y.
PDB entry 7wi8: Cryo-EM structure of inactive mGlu3 bound to LY341495
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2022-01-03
Authors: Fang, W., Yang, F., Xu, C.J., Ling, S.L., Lin, L., Zhou, Y.X., Sun, W.J., Wang, X.M., Liu, P., Rondard, P., Pan, S., Pin, J.P., Tian, C.L., Liu, J.F.
PDB entry 7wi9: The THF-II riboswitch bound to THF and soaking with SeUrea
Classification: RNA
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2022-01-03
Authors: Xu, L., Fang, X., Xiao, Y.
PDB entry 7wia: The apo-form of THF-II C22G riboswitch
Classification: RNA
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 3.22 Å
Deposited: 2022-01-03
Authors: Xu, L., Fang, X., Xiao, Y.
PDB entry 7wib: The THF-II riboswitch bound to THF
Classification: RNA
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2022-01-03
Authors: Xu, L., Fang, X., Xiao, Y.
PDB entry 7wic: Cryo-EM structure of the SS-14-bound human SSTR2-Gi1 complex
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-01-03
Authors: Chen, L., Wang, W., Dong, Y., Shen, D., Guo, J., Qin, J., Zhang, H., Shen, Q., Zhang, Y., Mao, C.
PDB entry 7wid: Crystal structure of Staphylococcus aureus ClpP in complex with ZG180
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-01-03
Authors: Wei, B.Y., Gan, J.H., Yang, C.-G.
PDB entry 7wie: The THF-II riboswitch bound to 7DG
Classification: RNA
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-01-03
Authors: Xu, L., Fang, X., Xiao, Y.
PDB entry 7wif: The THF-II riboswitch bound to H4B
Classification: RNA
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2022-01-03
Authors: Xu, L., Fang, X., Xiao, Y.
PDB entry 7wig: Cryo-EM structure of the L-054,264-bound human SSTR2-Gi1 complex
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-01-03
Authors: Chen, L., Wang, W., Dong, Y., Shen, D., Guo, J., Qin, J., Zhang, H., Shen, Q., Zhang, Y., Mao, C.
PDB entry 7wih: Cryo-EM structure of LY2794193-bound mGlu3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2022-01-03
Authors: Fang, W., Yang, F., Xu, C.J., Ling, S.L., Lin, L., Zhou, Y.X., Sun, W.J., Wang, X.M., Liu, P., Rondard, P., Pan, S., Pin, J.P., Tian, C.L., Liu, J.F.
PDB entry 7wii: The THF-II riboswitch bound to NPR
Classification: RNA
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-01-03
Authors: Xu, L., Fang, X., Xiao, Y.
PDB entry 7wij: Cryo-EM structure of prenyltransferase domain of Macrophoma phaseolina macrophomene synthase
Classification: TRANSFERASE
Source organism: Macrophomina phaseolina MS6
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2022-01-03
Authors: Mori, T., Adachi, N., Abe, I.
PDB entry 7wik: Crystal structure of oligoribonuclease of Mycobacterium smegmatis mc2 155
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2022-01-03
Authors: Badhwar, P., Taneja, B.
PDB entry 7wim: Crystal structure of Arabidopsis thaliana FKBP43 N-terminal domain
Classification: CHAPERONE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-01-03
Authors: Singh, A.K., Saharan, K., Baral, S., Vasudevan, D.
PDB entry 7win: Crystal structure of BAZ2B TAM domain
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-01-04
Authors: Feng, Y.Y., Liu, K., Min, J.R.
PDB entry 7wio: NMR structure of N-terminal domain of Triconephila clavipes of major ampullate spidroin 1
Classification: STRUCTURAL PROTEIN
Source organism: Trichonephila clavipes
Experimental method: SOLUTION NMR
Deposited: 2022-01-04
Authors: Oktaviani, N.A., Malay, A.D., Matsugami, A., Hayashi, F., Numata, K.
PDB entry 7wir: Holo form of N381A mutant of copper amine oxidase from Arthrobacter globiformis
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-01-04
Authors: Murakawa, T., Okajima, T.
PDB entry 7wis: Catalytic intermediate structure of N381A mutant of copper amine oxidase from Arthrobacter globiformis
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-01-04
Authors: Murakawa, T., Okajima, T.
PDB entry 7wit: Structure of SUR1 in complex with mitiglinide
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Mesocricetus auratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2022-01-04
Authors: Chen, L., Wang, M.M.
PDB entry 7wiu: Cryo-EM structure of Mycobacterium tuberculosis irtAB in inward-facing state
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2022-01-05
Authors: Zhang, B., Sun, S., Yang, H., Rao, Z.
PDB entry 7wiv: Cryo-EM structure of Mycobacterium tuberculosis irtAB in complex with an AMP-PNP
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2022-01-05
Authors: Zhang, B., Sun, S., Yang, H., Rao, Z.
PDB entry 7wiw: Cryo-EM structure of Mycobacterium tuberculosis irtAB complexed with ATP in an occluded conformation
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2022-01-05
Authors: Zhang, B., Sun, S., Yang, H., Rao, Z.
PDB entry 7wix: Cryo-EM structure of Mycobacterium tuberculosis irtAB in complex with ADP
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2022-01-05
Authors: Zhang, B., Sun, S., Yang, H., Rao, Z.
PDB entry 7wiy: Cryo-EM structure of human TPH2 tetramer
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2022-01-05
Authors: Zhu, K.F., Liu, C., Zhang, H.W., Wang, D.P.
PDB entry 7wiz: Structural basis for ligand binding modes of CTP synthase
Classification: LIGASE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-01-05
Authors: Liu, J.L., Guo, C.J.
PDB entry 7wj0: Solution structure of N-terminal domain (nMazE6) of mycobacterial antitoxin MazE6 from MazEF6 TA system
Classification: ANTITOXIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: SOLUTION NMR
Deposited: 2022-01-05
Authors: Kumari, K., Sarma, S.P.
PDB entry 7wj1: The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with arachidonic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.86 Å
Deposited: 2022-01-05
Authors: Sugiyama, S., Kakinouchi, K., Nakano, R., Matsuoka, S., Tsuchikawa, H., Sonoyama, M., Inoue, Y., Hayashi, F., Murata, M.
PDB entry 7wj2: Crystal structure of HLA-C*1402 complexed with 8-mer HIV gag peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2022-01-05
Authors: Kuroha, J., Morita, D., Asa, M., Sugita, M.
PDB entry 7wj3: Crystal structure of HLA-C*1402 complexed with 4-mer lipopeptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56344 Å
Deposited: 2022-01-05
Authors: Kuroha, J., Morita, D., Asa, M., Sugita, M.
PDB entry 7wj4: Structural basis for ligand binding modes of CTP synthase
Classification: LIGASE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2022-01-05
Authors: Liu, J.L., Guo, C.J.
PDB entry 7wj5: Cryo-EM structure of human somatostatin receptor 2 complex with its agonist somatostatin delineates the ligand binding specificity
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2022-01-05
Authors: Heo, Y.S., Yoon, E.J., Jeon, Y.E., Yun, J.-H., Ishimoto, N., Woo, H., Park, S.Y., Song, J., Lee, W.T.
PDB entry 7wj6: Crystal Structure of the Kinase Domain of a Class III Lanthipeptide Synthetase CurKC
Classification: BIOSYNTHETIC PROTEIN
Source organism: Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / KCTC 9072 / NBRC 15933 / NCIMB 10081 / Henssen B9)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-01-05
Authors: Huang, S., Wang, H.
PDB entry 7wj7: Crystal Structure of the Kinase Domain with Adenosine of a Class III Lanthipeptide Synthetase CurKC
Classification: BIOSYNTHETIC PROTEIN
Source organism: Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / KCTC 9072 / NBRC 15933 / NCIMB 10081 / Henssen B9)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-01-05
Authors: Huang, S., Wang, H.
PDB entry 7wj8: Complex structure of AtHPPD-PyQ1
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.805 Å
Deposited: 2022-01-05
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 7wj9: Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase, P21 space group
Classification: HYDROLASE
Source organism: Lactococcus lactis subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-01-06
Authors: Ikegaya, M., Miyazaki, T.
PDB entry 7wja: Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase, P6322 space group
Classification: HYDROLASE
Source organism: Lactococcus lactis subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-01-06
Authors: Ikegaya, M., Miyazaki, T.
PDB entry 7wjb: Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase in complex with glucose
Classification: HYDROLASE
Source organism: Lactococcus lactis subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-01-06
Authors: Ikegaya, M., Miyazaki, T.
PDB entry 7wjc: Crystal structure of Lactococcus lactis subsp. cremoris GH31 alpha-1,3-glucosidase mutant D394A in complex with nigerose
Classification: HYDROLASE
Source organism: Lactococcus lactis subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-01-06
Authors: Ikegaya, M., Miyazaki, T.