LiteFold/PDB huggingface dataset:
PDB entry 9ssq: Human Methionine Synthase With Methyltetrahydrofolate, C-Half From Full-Length
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2025-09-26
Authors: Ferreira, D.S.M., Yue, W.W., McCorvie, T.J.
PDB entry 9ssr: Human Methionine Synthase With Methyltetrahydrofolate, Hydroxocobalamin, and SAM, N-Half From Full-Length
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2025-09-26
Authors: Ferreira, D.S.M., Yue, W.W., McCorvie, T.J.
PDB entry 9sss: Human Methionine Synthase With Methyltetrahydrofolate, Hydroxocobalamin, and SAM, C-Half His-ON From Full-Length
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2025-09-26
Authors: Ferreira, D.S.M., Yue, W.W., McCorvie, T.J.
PDB entry 9sst: Human Methionine Synthase With Methyltetrahydrofolate, Hydroxocobalamin, and SAM, C-Half His-OFF From Full-Length
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2025-09-26
Authors: Ferreira, D.S.M., Yue, W.W., McCorvie, T.J.
PDB entry 9ssu: Human Methionine Synthase With Methylcobalamin, N-Half From Full-Length
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2025-09-26
Authors: Ferreira, D.S.M., Yue, W.W., McCorvie, T.J.
PDB entry 9ssv: Human Methionine Synthase With Methylcobalamin, Activation Domain From Full-Length
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2025-09-26
Authors: Ferreira, D.S.M., Yue, W.W., McCorvie, T.J.
PDB entry 9suy: TPX2 7-20 fused to Aurora-A residues 116-389, covalently modified on Cys290 by F104 (7-((perfluorophenyl)sulfonyl)-3-(trifluoromethyl)-5,6,7,8-tetrahydro-[1,2,4]triazolo[4,3-a]pyrazine)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2025-09-30
Authors: Miles, J.A., Chesti, J., Nelson, A., Bayliss, R.
PDB entry 9sv1: Acylphosphatase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2025-09-30
Authors: Camara-Artigas, A., Martinez-Rodriguez, S., Gavira, J.A., Salinas-Garcia, M.C.
PDB entry 9sv2: Intertwined dimer of the Acylphosphatase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-09-30
Authors: Camara-Artigas, A., Martinez-Rodriguez, S., Gavira, J.A., Salinas-Garcia, M.C.
PDB entry 9sv3: Local refinement of EloB/EloC/VHL/CV2a/14-3-3zeta/ERa from pose 1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2025-09-30
Authors: Crowe, C., Nakasone, M.A., Harzing, T., Verhoef, C.J.A., Cossar, P.J., Ciulli, A.
PDB entry 9sv8: Herpes simplex virus 2 delta28-73 glycoprotein C ectodomain in complex with C3b
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human alphaherpesvirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2025-10-02
Authors: Rojas Rechy, M.H., Atanasiu, D., Hook, L.M., Cairns, M.T., Saw, W.T., Cahill, A., Guo, Z., Calabrese, A.N., Ranson, N.A., Friedman, H.M., Cohen, G.H., Fontana, J.
PDB entry 9svx: XRCC3-RAD51C-RAD51D-XRCC2 (XRCC3 complex) capping a RAD51 filament on single stranded DNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-10-03
Authors: Greenhough, L.A., West, S.C.
PDB entry 9svy: XRCC3-RAD51C-RAD51D-XRCC2 (XRCC3 complex) capping a RAD51 filament on partially duplex DNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-10-03
Authors: Greenhough, L.A., West, S.C.
PDB entry 9sw0: XRCC3-RAD51C-RAD51D-XRCC2 (XRCC3 complex) capping a RAD51 filament on a D-loop intermediate
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-10-03
Authors: Greenhough, L.A., West, S.C.
PDB entry 9sw2: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate a (composite structure)
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis str. Marburg
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2025-10-04
Authors: San Segundo-Acosta, P., Murphy, B.J.
PDB entry 9sw3: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate b (composite structure)
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2025-10-04
Authors: San Segundo-Acosta, P., Murphy, B.J.
PDB entry 9sw4: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate a (composite structure)
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-10-04
Authors: San Segundo-Acosta, P., Murphy, B.J.
PDB entry 9sw5: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate b (composite structure)
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2025-10-04
Authors: San Segundo-Acosta, P., Murphy, B.J.
PDB entry 9sw6: Structure of the Mvh-Hdr-Fmd complex of Methanothermobacter marburgensis (composite structure)
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-10-04
Authors: San Segundo-Acosta, P., Murphy, B.J.
PDB entry 9swa: Adenovirus dodecahedron
Classification: VIRUS LIKE PARTICLE
Source organism: Chimpanzee adenovirus Y25
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-10-04
Authors: Kabasakal, B.V., Buzas, D., Bufton, J., Berger-Schaffitzel, C., Berger, I.
PDB entry 9swj: Human ADP-forming succinyl-CoA ligase complex SUCLG1-SUCLA2 bound to coenzyme A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-10-07
Authors: Bailey, H.J., McCorvie, T.J., Shrestha, L., Rembeza, E., Strain-Damerell, C., Burgess-Brown, N., Yue, W.W.
PDB entry 9swn: Cryo-EM structure of yeast telomerase holoenzyme
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-10-07
Authors: Hu, H., Franco-Echevarria, E., Nguyen, T.H.D.
PDB entry 9swo: The catalytic core of yeast telomerase holoenzyme
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-10-07
Authors: Hu, H., Franco-Echevarria, E., Nguyen, T.H.D.
PDB entry 9swy: The structure of AfUAP1 in complex with GlcNAc-1P
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2025-10-07
Authors: Yan, K., Raimi, O., Chen, X.
PDB entry 9sx2: 30S Doxycycline Bound E. coli Ribosome
Classification: RIBOSOME
Source organism: Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.08 Å
Deposited: 2025-10-08
Authors: Stuart, W.S., Isupov, M.N., Harmer, N.J.
PDB entry 9sx6: CryoEM structure of the octamer MraZ in complex with 1 box promoter from Mycoplasma genitalium
Classification: DNA BINDING PROTEIN
Source organism: Mycoplasmoides genitalium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2025-10-08
Authors: Reverter, D., Sanchez-Alba, L., Durand, A.
PDB entry 9sxc: Crystal structure of the Legionella pneumophila effector SidL (Lpg0437) in complex with its metaeffector LegA11 (Lpg0436)
Classification: HYDROLASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-10-09
Authors: Machtens, D.A., Willerding, J.M., Eschenburg, S., Reubold, T.F.
PDB entry 9sxi: HUMAN CD38 ECTODOMAIN BOUND TO CVN14-ADPR ADDUCT
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2025-10-09
Authors: Rangel, V., Zebisch, M., Stott, A.
PDB entry 9sxj: Crystal structure of wild-type c-MET bound by capmatinib.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.315 Å
Deposited: 2025-10-09
Authors: Collie, G.W., Russell, I.C.
PDB entry 9sxv: NMR structure determination of a dynamic and thermodynamically stable CUUG RNA tetraloop
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2025-10-10
Authors: Oxenfarth, A., Kuemmerer, F., Leopold, D., Bottaro, S., Schnieders, R., Pinter, G., Jonker, H.R.A., Fuertig, B., Richter, C., Blackledge, M., Lindorff-Larsen, K., Schwalbe, H.
PDB entry 9sy4: NMR structure determination of a dynamic and thermodynamically stable CUUG RNA tetraloop without restrained loop base pair
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2025-10-10
Authors: Oxenfarth, A., Kuemmerer, F., Leopold, D., Bottaro, S., Schnieders, R., Pinter, G., Jonker, H.R.A., Fuertig, B., Richter, C., Blackledge, M., Lindorff-Larsen, K., Schwalbe, H.
PDB entry 9sy5: Engineering the ADDomer Nanoparticle Vaccine Scaffold for Improved Assembly and Enhanced Stability.
Classification: VIRUS LIKE PARTICLE
Source organism: Chimpanzee adenovirus Y25
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2025-10-10
Authors: Balchin, G., Berger-Schaffitzel, C., Berger, I.
PDB entry 9sya: Crystal structure of HERV-K envelope glycoprotein surface subunit with cholates and sulfates bound
Classification: VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-10-10
Authors: Nikolopoulos, N., Modis, Y.
PDB entry 9syh: E. coli 70S ribosome from deltaRlmE strain
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.89 Å
Deposited: 2025-10-12
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9syi: Crystal structure of TEAD4 in complex with compound 9
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2025-10-13
Authors: Scheufler, C., Izaac, A.
PDB entry 9syj: Asymmetric hexameric MmpS4-MmpL4 complex from Mycobacterium tuberculosis with ""short"" coiled-coil domain
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2025-10-13
Authors: Lichti, N.P., Earp, J.C., Garaeva, A.A., Seeger, M.A.
PDB entry 9syn: Crystal structure of TEAD4 in complex with Vgll1-peptide and IAG933
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-10-13
Authors: Scheufler, C., Villard, F.
PDB entry 9syr: Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
Classification: RIBOSOME
Source organism: Aequorea victoria; Brachypodium distachyon; Homo sapiens; Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2025-10-13
Authors: Yudin, D., Jaskolowski, M., Scaiola, A., Ban, N.
PDB entry 9syt: Asymmetric hexameric MmpS4-MmpL4 complex from Mycobacterium tuberculosis with ""long"" coiled-coil domain
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2025-10-14
Authors: Lichti, N.P., Earp, J.C., Garaeva, A.A., Seeger, M.A.
PDB entry 9syu: shutdown state non-muscle myosin 2A heads region
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2025-10-14
Authors: Peckham, M., Carrington, G.
PDB entry 9syv: Symmetric hexameric MmpS4-MmpL4 complex from Mycobacterium tuberculosis
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2025-10-14
Authors: Lichti, N.P., Earp, J.C., Garaeva, A.A., Seeger, M.A.
PDB entry 9sz7: CryoEM structure of MraZ in complex with 4 box promoter from Mycoplasma genitalium
Classification: DNA BINDING PROTEIN
Source organism: Mycoplasmoides genitalium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2025-10-14
Authors: Reverter, D., Sanchez-Alba, L., Durand, A.
PDB entry 9szj: Crystal structure of Y1230H c-MET bound by capmatinib.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.289 Å
Deposited: 2025-10-14
Authors: Collie, G.W., Russell, I.C.
PDB entry 9szp: Crystal structure of the human YTHDC2 YTH domain in complex with m6A DNA
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2025-10-15
Authors: Bedi, R.K., Caflisch, A.
PDB entry 9szq: Crystal structure of the E336K mutant of human Apoptosis Inducing Factor
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-10-15
Authors: Martinez-Julvez, M., Ferreira, P., Ferrer, M.
PDB entry 9szr: shutdown state non-muscle myosin 2A heads region
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2025-10-15
Authors: Peckham, M., Carrington, G.
PDB entry 9szt: Co-chaperone Bag1-bound human 26S proteasome in SBAG1.2 state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-10-15
Authors: Cheng, T.C., Sakata, E., Muntaner, J., Maestro-Lopez, M., Cuellar, J., Valpuesta, J.M.
PDB entry 9szu: Cerium(III)-bound de novo photoredox enzyme (PLZ2.3)
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-10-15
Authors: Leiss-Maier, F., Behringer, J., Mustafa, G., Heider, A., Muehlhofer, R., Klein, A.S., Groll, M., Zeymer, C.
PDB entry 9szv: Co-chaperone Bag1-bound human 26S proteasome in SBAG1.3 state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-10-15
Authors: Cheng, T.C., Sakata, E., Muntaner, J., Maestro-Lopez, M., Cuellar, J., Valpuesta, J.M.
PDB entry 9t05: X-ray structure of the adduct formed by dirhodium tetraacetate with a C-phycocyanin
Classification: PHOTOSYNTHESIS
Source organism: Galdieria phlegrea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.169 Å
Deposited: 2025-10-16
Authors: Merlino, A., Ferraro, G.
PDB entry 9t06: Crystal structure of OXA-244 beta-lactamase K73A mutant
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.845 Å
Deposited: 2025-10-16
Authors: Nermont, R., Oueslati, S., Aumont-Nicaise, M., Retailleau, P., Iorga, B.I., Naas, T.
PDB entry 9t08: Crystal structure of wild-type c-MET bound by sitravatinib.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.462 Å
Deposited: 2025-10-16
Authors: Collie, G.W.
PDB entry 9t09: X-ray structure of the catalytic domain of CDC25B C473S at 1.34 angstrom resolution
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2025-10-16
Authors: Troisi, R., Sica, F.
PDB entry 9t0a: X-ray structure of the complex between the catalytic domain of CDC25B C473S and 3-O-methylfluorescein phosphate (3-OMFP)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2025-10-16
Authors: Troisi, R., Napolitano, V., Sica, F.
PDB entry 9t0b: Crystal structure of D1228V c-MET bound by sitravatinib.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.539 Å
Deposited: 2025-10-16
Authors: Collie, G.W.
PDB entry 9t0d: Crystal structure of wild-type c-MET bound by glesatinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.196 Å
Deposited: 2025-10-16
Authors: Collie, G.W.
PDB entry 9t0h: NCS-1 bound to a FDA-approved drug
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2025-10-17
Authors: Miro-Rodriguez, C., Sanchez-Barrena, M.J.
PDB entry 9t0k: Catalase CryoEM Structure from Human erythrocyte at 1.87A resolution
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.87 Å
Deposited: 2025-10-17
Authors: Li, J., Henderson, R., Russo, C.J., Wilson, H., Chen, S.
PDB entry 9t0l: Catalase CryoEM Structure from Rhizobium radiobacter at 1.7A resolution
Classification: OXIDOREDUCTASE
Source organism: Agrobacterium radiobacter
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.73 Å
Deposited: 2025-10-17
Authors: Li, J., Henderson, R., Russo, C.J., Wilson, H., Chen, S.
PDB entry 9t0m: Catalase cryoEM structure from Micrococcus luteus at 1.9 Angstrom resolution.
Classification: OXIDOREDUCTASE
Source organism: Micrococcus luteus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2025-10-17
Authors: Li, J., Henderson, R., Russo, C.J., Wilson, H., Chen, S.
PDB entry 9t0n: Crystal structure of TagF (ACIAD2683) from Acinetobacter baylyi ADP1
Classification: PROTEIN BINDING
Source organism: Acinetobacter baylyi ADP1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-10-17
Authors: Engelin, M.K., Delbart, F., Maier, T., Basler, M.
PDB entry 9t0y: E. coli 70S ribosome from delta-9 strain
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.87 Å
Deposited: 2025-10-20
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t0z: HPFcold Bound Hibernating C. burnetii 30S Ribosome
Classification: RIBOSOME
Source organism: Coxiella burnetii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2025-10-20
Authors: Stuart, W.S., Isupov, M.N., Harmer, N.J.
PDB entry 9t19: E. coli 70S ribosome from delta-RlmE strain, PTC class 0
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1a: E. coli 70S ribosome from delta-RlmE strain, PTC class 1
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1b: E. coli 70S ribosome from delta-RlmE strain, PTC class 2
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1c: E. coli 70S ribosome from delta-RlmE strain, PTC class 3
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1e: E. coli 70S ribosome from delta-RlmE strain, PTC class 4
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.28 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1f: E. coli 70S ribosome from delta-RlmE strain, PTC class 5
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1g: E. coli 70S ribosome from delta-RlmE strain, PTC class 6
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1h: E. coli 70S ribosome from delta-RlmE strain, PTC class 7
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1i: E. coli 70S ribosome from delta-RlmE strain, PTC class 8
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1j: E. coli 70S ribosome from delta-RlmE strain, PTC class 9
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.23 Å
Deposited: 2025-10-21
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t1m: Nuclear export protein/Non-structural protein 2 (NEP/NS2) in complex with artificial alpha Rep protein
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/WSN/1933(H1N1)); synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2025-10-21
Authors: Stelfox, A.J., Ballandras-Colas, A., Crepin, T.
PDB entry 9t1q: Crystal structure of D1228V c-MET bound by glesatinib.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.942 Å
Deposited: 2025-10-21
Authors: Collie, G.W., Russell, I.C.
PDB entry 9t28: WspR response regulator with crystallization epitope mutations G306D:G308D
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2025-10-22
Authors: Fairhead, M., Wiggers, H., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Bowesman-Jones, H., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t29: Jumonji domain-containing protein 2D with crystallization epitope mutation Q41R
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.013 Å
Deposited: 2025-10-22
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t2d: Jumonji domain-containing protein 2B with crystallization epitope mutations L916G:R917A:A918D
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-10-22
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t2e: Bromodomain containing protein 1 with crystal epitope mutations P566E:V569R
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2025-10-22
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t2f: Crystal structure of human PRKCBP1 Zinc finger MYND-type containing 8 with pentaglutamate tag
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2025-10-22
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t2g: Human PRKCBP1 zinc finger MYND-type containing 8 with crystallization epitope mutations N221R:M226H
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2025-10-22
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t2h: Jumonji domain-containing protein 2B with crystallization epitope mutations L916G:R917A:A918D
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2025-10-22
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t2i: SP100 nuclear antigen with crystallization epitope mutations N816D:T820R
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2025-10-22
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t2j: E. coli 70S ribosome from delta-9 strain, PTC class 0
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.02 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2k: E. coli 70S ribosome from delta-9 strain, PTC class 1
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2l: E. coli 70S ribosome from delta-9 strain, PTC class 2
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.07 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2m: E. coli 70S ribosome from delta-9 strain, PTC class 3
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2n: E. coli 70S ribosome from delta-9 strain, PTC class 4
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2o: E. coli 70S ribosome from delta-9 strain, PTC class 5
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.07 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2p: E. coli 70S ribosome from delta-9 strain, PTC class 6
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.08 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2q: E. coli 70S ribosome from delta-9 strain, PTC class 7
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.08 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2r: E. coli 70S ribosome from delta-9 strain, PTC class 8
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2s: E. coli 70S ribosome from delta-9 strain, PTC class 9
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.07 Å
Deposited: 2025-10-23
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t2v: Crystal structure of wild-type c-MET bound by cabozantinib.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.665 Å
Deposited: 2025-10-23
Authors: Collie, G.W., Russell, I.C.
PDB entry 9t2w: YdhG-like domain-containing protein (Frataxin) from Listeria monocytogenes
Classification: METAL BINDING PROTEIN
Source organism: Listeria monocytogenes 10403S
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-10-24
Authors: Falb, N., Fink, J., Gabler, T., Hofbauer, S.
PDB entry 9t2z: Spindlin 1 with crystallization epitope mutations H127D:L128D:T131R
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2025-10-24
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Bowesman-Jones, H., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t31: Spindlin family member 4 with crystallization epitope mutations G129S:H131E
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2025-10-24
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Bowesman-Jones, H., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F.
PDB entry 9t32: The Cullin 2 RING VHL E3 ligase dimerised by the homoPROTAC CM11
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.9 Å
Deposited: 2025-10-24
Authors: Crowe, C., Ciulli, A.
PDB entry 9t38: Rhs2-CT endonuclease toxin in complex with cognate immunity protein RhsI2 and EF-Tu
Classification: ANTIMICROBIAL PROTEIN
Source organism: Escherichia coli; Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2025-10-27
Authors: Pankov, G., Hunter, W.N., Coulthurst, S.J.
PDB entry 9t3c: RACB with GDT bound
Classification: PLANT PROTEIN
Source organism: Hordeum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2025-10-27
Authors: Janowski, R., Mohamadi, M., Hagn, F., Niessing, D.
PDB entry 9t3d: RACB with GPPNHP bound
Classification: PLANT PROTEIN
Source organism: Hordeum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2025-10-27
Authors: Janowski, R., Mohamadi, M., Hagn, F., Niessing, D.
PDB entry 9t3e: RACB with GSP and the fragment of RIPb protein bound (antiparallel)
Classification: PLANT PROTEIN
Source organism: Hordeum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-10-27
Authors: Janowski, R., Mohamadi, M., Hagn, F., Niessing, D.
PDB entry 9t3f: RACB with GSP and the fragment of RIPb protein bound (parallel)
Classification: PLANT PROTEIN
Source organism: Hordeum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2025-10-27
Authors: Janowski, R., Mohamadi, M., Hagn, F., Niessing, D.
PDB entry 9t3j: Protease from Norovirus Sydney GII.4 strain with crystallization epitope mutation H50Y
Classification: VIRAL PROTEIN
Source organism: Norovirus Sydney 2212
Experimental method: X-RAY DIFFRACTION
Resolution: 2.411 Å
Deposited: 2025-10-27
Authors: Fairhead, M., MacLean, E.M., Ni, X., Wright, N.D., Koekemoer, L., von Delft, F.
PDB entry 9t3l: Crystal structure of the Acl1 ankyrin repeat domain in complex with the second Rpl1 domain
Classification: RIBOSOMAL PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2025-10-28
Authors: Burchert, F., Kiontke, S., Bange, G.
PDB entry 9t3p: Nonameric Ena1C ring of Bacillus cereus
Classification: PROTEIN FIBRIL
Source organism: Bacillus paranthracis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-10-28
Authors: Sleutel, M., Remaut, H.
PDB entry 9t3q: Crystal structure of D1228V c-MET bound by cabozantinib.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.629 Å
Deposited: 2025-10-28
Authors: Collie, G.W., Russell, I.C.
PDB entry 9t3r: Structure of human HER2 in complex with EPS232 Fab
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-10-29
Authors: Birtley, J., Johnson, R.M., Regan, L., Soni, K., Pye, V.E., Fitzgerald, K.
PDB entry 9t3s: Structure of human HER2 in complex with EPS226 Fab
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-10-29
Authors: Birtley, J., Regan, L., Johnson, R.M., Soni, K., Pye, V.E., Fitzgerald, K.
PDB entry 9t3x: cryo-EM structure of CPSF160-WDR33-ZC3H18
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2025-10-30
Authors: Kuhn, C.C., Chand, M.K., Todesca, S., Williams, K., Keidel, A., Garland, W., Jensen, T.H., Conti, E.
PDB entry 9t3y: Cryo-EM structure of alphaM/beta2:C3d-anti-CR3-Nb headpiece complex (HPO2 3D class reconstruction)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2025-10-30
Authors: Andersen, G.R., Fruergaard, M.U.
PDB entry 9t47: Structure of the SUN4 domain from Saccharomyces cerevisiae
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2025-10-30
Authors: Weitzel, V., Veelders, M., Moesch, H.-U., Essen, L.-O.
PDB entry 9t4n: Structure of the Q318A mutant of the SUN4 domain from Saccharomyces cerevisiae
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2025-10-30
Authors: Weitzel, V., Veelders, M., Moesch, H.-U., Essen, L.-O.
PDB entry 9t4o: Structure of the E283A mutant of the SUN4 domain from Saccharomyces cerevisiae
Classification: CARBOHYDRATE
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2025-10-30
Authors: Weitzel, K., Essen, L.-O.
PDB entry 9t4p: Dengue 2 Virus NS2B-NS3 protease fusion protein with crystal epitope mutation K174Q
Classification: VIRAL PROTEIN
Source organism: dengue virus type 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-10-30
Authors: Fairhead, M., Ni, X., Koekemoer, L., MacLean, E.M., Wright, N.D., Bowesman-Jones, H., Von Delft, F.
PDB entry 9t4q: Structure of the SUN4 domain of SIM1 from Saccharomyces cerevisiae
Classification: CARBOHYDRATE
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2025-10-30
Authors: Korf, L., Wolf, K., Moesch, H.-U., Essen, L.-O.
PDB entry 9t4r: Staphylococcus aureus 70S initiation complex with a natural mRNA
Classification: RIBOSOME
Source organism: Escherichia coli; Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2025-10-30
Authors: Bahena Ceron, R., Klaholz, B., Marzi, S.
PDB entry 9t4v: ALC1/CHD1L in an intermediate conformation, bound to a PARylated nucleosome
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.6 Å
Deposited: 2025-11-02
Authors: Bridges, H.R., Bacic, L., Deindl, S., Gaullier, G.
PDB entry 9t4z: Crystal structure of PpNeuA CMP-Kdn synthetase
Classification: LIGASE
Source organism: Prymnesium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-11-03
Authors: Levy, C.W., Ortmayer, M., Morley, C.
PDB entry 9t56: Cryo-EM structure of ISCro4-DBL-TBL-tDNA-dDNA synaptic complex
Classification: RECOMBINATION
Source organism: Citrobacter rodentium ICC168; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2025-11-04
Authors: Fernandez Carrera, J., Pelea, O., Gerecke, S.E., Chanez, C., Jinek, M.
PDB entry 9t5k: Local refinement of RNA-free assembled Langya virus N-core
Classification: VIRAL PROTEIN
Source organism: Langya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-11-05
Authors: Jayachandran, R.B., Quignon, E., Renner, M.
PDB entry 9t5l: Helical reconstruction of Langya henipavirus N-core nucleocapsid-like complex
Classification: VIRAL PROTEIN
Source organism: Langya virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-11-05
Authors: Jayachandran, R.B., Quignon, E., Renner, M.
PDB entry 9t5s: Crystal structure of human PPARalpha in complex with co-activator PGC-1 alpha peptide and bempedoic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2025-11-05
Authors: Useini, A., Strater, N., Kuenze, G., Heiker, J.T., Sheikh, B.N.
PDB entry 9t5v: Cryo-EM structure of alphaM/beta2:C3d-anti-CR3-Nb headpiece complex (HPO1 3D class reconstruction)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2025-11-06
Authors: Andersen, G.R., Fruergaard, M.U.
PDB entry 9t5w: Cryo-EM structure of mutant R61H alphaM/beta2 headpiece complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2025-11-06
Authors: Andersen, G.R., Fruergaard, M.U.
PDB entry 9t5z: Cryo-EM structure of alphaM/beta2:MEM148-Fab headpiece complex (without alphaM I-domain)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-11-06
Authors: Lorentzen, J., Andersen, G.R.
PDB entry 9t61: Doxycycline Bound C. burnetii 30S Ribosome
Classification: RIBOSOME
Source organism: Coxiella burnetii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2025-11-06
Authors: Stuart, W.S., Isupov, M.N., Harmer, N.J.
PDB entry 9t62: Crystal structure of ortho-aminophenol oxidase SmNspF from Streptomyces murayamaensis
Classification: OXIDOREDUCTASE
Source organism: Streptomyces murayamaensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-11-06
Authors: Le Xuan, H., Rompel, A.
PDB entry 9t6k: Crystal structure of wild-type c-MET bound by glumetinib.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.133 Å
Deposited: 2025-11-07
Authors: Collie, G.W., van Beek, L.
PDB entry 9t6m: E. coli 70S ribosome from delta-10 strain
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.87 Å
Deposited: 2025-11-07
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t6o: Low-dose (14.9 kGy) structure of copper-containing nitrite reductase from Achromobacter cycloclastes at room temperature
Classification: OXIDOREDUCTASE
Source organism: Achromobacter cycloclastes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.597 Å
Deposited: 2025-11-07
Authors: Caramello, N., Rose, S.L., Engilberge, S., Royant, A.
PDB entry 9t6p: Higher-dose (283.1 kGy) structure of copper-containing nitrite reductase from Achromobacter cycloclastes at room temperature
Classification: OXIDOREDUCTASE
Source organism: Achromobacter cycloclastes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.008 Å
Deposited: 2025-11-07
Authors: Caramello, N., Rose, S.L., Engilberge, S., Royant, A.
PDB entry 9t6q: Low-dose (33.3 kGy) structure of copper-containing nitrite reductase from Achromobacter cycloclastes at cryogenic temperature
Classification: OXIDOREDUCTASE
Source organism: Achromobacter cycloclastes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.465 Å
Deposited: 2025-11-07
Authors: Caramello, N., Rose, S.L., Engilberge, S., Royant, A.
PDB entry 9t6u: Higher-dose (1332 kGy) structure of copper-containing nitrite reductase from Achromobacter cycloclastes at cryogenic temperature
Classification: OXIDOREDUCTASE
Source organism: Achromobacter cycloclastes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-11-07
Authors: Caramello, N., Rose, S.L., Engilberge, S., Royant, A.
PDB entry 9t6v: Low-dose (32.5 kGy) structure of horse-heart myoglobin at room temperature
Classification: OXYGEN STORAGE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.243 Å
Deposited: 2025-11-07
Authors: Caramello, N., Rose, S.L., Engilberge, S., Royant, A.
PDB entry 9t6w: Higher-dose (260.0 kGy) structure of horse-heart myoglobin at room temperature
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2025-11-07
Authors: Caramello, N., Rose, S.L., Engilberge, S., Royant, A.
PDB entry 9t6x: Higher-dose (676.8 kGy) structure of horse-heart myoglobin at cryogenic temperature
Classification: OXYGEN STORAGE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2025-11-07
Authors: Caramello, N., Rose, S.L., Engilberge, S., Royant, A.
PDB entry 9t6y: Low-dose (14.4 kGy) structure of horse-heart myoglobin at cryogenic temperature
Classification: OXYGEN STORAGE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2025-11-07
Authors: Caramello, N., Rose, S.L., Engilberge, S., Royant, A.
PDB entry 9t6z: EV-A71 (genotype B5) empty particle in complex with 16-3-3C Fab
Classification: VIRUS
Source organism: Homo sapiens; Human enterovirus 71
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2025-11-08
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9t74: 2'-fluoro-modified pyrimidine (FY) RNA aptamer binding to the receptor binding domain (RBD) of the SARS-CoV-2 spike protein. (focus map: RBD-aptamer)
Classification: RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; synthetic RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2025-11-10
Authors: Kristoffersen, E.L., Andersen, E.S., Zwergious, N.H.
PDB entry 9t7f: Crystal structure of human Signal Regulatory Protein 2 (SIRP) alpha V2 in complex with 5-Hydroxy-L-Tryptophan
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-11-10
Authors: Barelier, S., Barral, K., Betzi, S., Garcin, E.D., Miller, T.W.
PDB entry 9t7j: cryo-EM structure of AKT phosphorylated mTOR complex 2, overall refinement
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-11-10
Authors: Hay, I.M., Anandapadamanaban, M., Williams, R.L.
PDB entry 9t7u: Glyceraldehyde-3-phosphate dehydrogenase A (GAPDH)
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-11-11
Authors: Basle, A., Pelicoli-Riboldi, G., Waldron, K.
PDB entry 9t8k: E. coli 70S ribosome from delta-10 strain, PTC class 0
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.18 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8l: E. coli 70S ribosome from delta-10 strain, PTC class 1
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8m: E. coli 70S ribosome from delta-10 strain, PTC class 2
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8n: E. coli 70S ribosome from delta-10 strain, PTC class 3
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8o: E. coli 70S ribosome from delta-10 strain, PTC class 4
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8p: E. coli 70S ribosome from delta-10 strain, PTC class 5
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8q: E. coli 70S ribosome from delta-10 strain, PTC class 6
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.23 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8r: E. coli 70S ribosome from delta-10 strain, PTC class 7
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8s: E. coli 70S ribosome from delta-10 strain, PTC class 8
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8t: E. coli 70S ribosome from delta-10 strain, PTC class 9
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.23 Å
Deposited: 2025-11-13
Authors: Larsson, D.S.D., Selmer, M.
PDB entry 9t8y: Crystal structure of beta-TrCP bound by monophosphorylated NRF2 degron peptide.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.795 Å
Deposited: 2025-11-13
Authors: Collie, G.W.
PDB entry 9t8z: Room temperature X-ray structure of the B1 domain of streptococcal protein G triple mutant T2Q, N8D, and N37D (GB1-QDD).
Classification: IMMUNE SYSTEM
Source organism: Streptococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2025-11-13
Authors: Engilberge, S., Becker, L.M., Kapitonova, A., Schanda, P.
PDB entry 9t92: cryo-EM structure of autophosphorylated mTOR complex 2, overall refinement
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-11-13
Authors: Hay, I.M., Anandapadamanaban, M., Williams, R.L.
PDB entry 9t93: cryo-EM structure of autophosphorylated mTOR complex 2, focused on a single protomer
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2025-11-13
Authors: Hay, I.M., Anandapadamanaban, M., Williams, R.L.
PDB entry 9t94: cryo-EM structure of AKT phosphorylated mTOR complex 2, focused on a single protomer
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-11-13
Authors: Hay, I.M., Anandapadamanaban, M., Williams, R.L.
PDB entry 9t95: Crystal structure of beta-TrCP bound by diphosphorylated NRF2 degron peptide.
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.145 Å
Deposited: 2025-11-13
Authors: Collie, G.W.
PDB entry 9t99: Structure of C. elegans Dicer-related helicase 1 (DRH1) bound to blunt end 5'P-dsRNA
Classification: RNA BINDING PROTEIN
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2025-11-14
Authors: Cusack, S., Uchikawa, E.
PDB entry 9t9m: Tilvestamab Fab bound to the anti-Fab nanobody
Classification: ANTITUMOR PROTEIN
Source organism: Mus sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2025-11-16
Authors: Lopez, A.J., Christakou, E., Kursula, P.
PDB entry 9t9u: Cryo-EM composite structure of mouse TRPM3 alpha 2 in complex with antagonist Ononetin
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2025-11-17
Authors: Shkumatov, A.V., Schenck, S., Brunner, J.D.