LiteFold/PDB huggingface dataset:
PDB entry 6kka: Xylanase J mutant from Bacillus sp. 41M-1
Classification: HYDROLASE
Source organism: Bacillus sp. 41M-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2019-07-24
Authors: Suzuki, M., Takita, T., Nakatani, K.
PDB entry 6kkb: A novel agonist of THRb
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-07-24
Authors: Yao, B.Q., Li, Y.
PDB entry 6kke: THRb mutation with a novel agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.577 Å
Deposited: 2019-07-25
Authors: Yao, B.Q., Li, Y.
PDB entry 6kkf: Crystal structure of proteinase K complexed with a triglycine
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2019-07-25
Authors: Nam, K.H.
PDB entry 6kkg: Crystal structure of MAGI2-Dendrin complex
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-07-25
Authors: Zhu, J.W., Zhang, H.J., Lin, L., Zhang, R.G.
PDB entry 6kkh: Crystal structure of the oxalate bound malyl-CoA lyase from Roseiflexus castenholzii
Classification: LYASE
Source organism: Roseiflexus castenholzii (strain DSM 13941 / HLO8)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2019-07-25
Authors: Tang, W.R., Wang, Z.G., Zhang, C.Y., Wang, C.
PDB entry 6kki: Crystal structure of Drug:Proton Antiporter-1 (DHA1) Family SotB, in the inward-occluded conformation
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.064 Å
Deposited: 2019-07-25
Authors: Xiao, Q.J., Deng, D.
PDB entry 6kkj: Crystal structure of Drug:Proton Antiporter-1 (DHA1) Family SotB, in the inward open conformation
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.385 Å
Deposited: 2019-07-25
Authors: Xiao, Q.J., Deng, D.
PDB entry 6kkk: Crystal structure of Drug:Proton Antiporter-1 (DHA1) Family SotB, in the inward open conformation (H115A mutant)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2019-07-26
Authors: Xiao, Q.J., Deng, D.
PDB entry 6kkl: Crystal structure of Drug:Proton Antiporter-1 (DHA1) Family SotB, in the inward conformation (H115N mutant)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.654 Å
Deposited: 2019-07-26
Authors: Xiao, Q.J., Sun, B., Zuo, Y.X., Guo, L., He, J.H., Deng, D.
PDB entry 6kkm: Crystal structure of RbcL-Raf1 complex from Anabaena sp. PCC 7120
Classification: CHAPERONE/PHOTOSYNTHESIS
Source organism: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-07-26
Authors: Xia, L.Y., Jiang, Y.L., Kong, W.W., Chen, Y., Zhou, C.Z.
PDB entry 6kkn: Crystal structure of RuBisCO accumulation factor Raf1 from Anabaena sp. PCC 7120
Classification: CHAPERONE
Source organism: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2019-07-26
Authors: Xia, L.Y., Jiang, Y.L., Kong, W.W., Chen, Y., Zhou, C.Z.
PDB entry 6kko: The crystal structure of SiaB-SiaC complex from Pseudomonas aeruginosa
Classification: GENE REGULATION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.099 Å
Deposited: 2019-07-26
Authors: Gan, J.H., Yang, C.
PDB entry 6kkp: The crystal structure of apo-SiaC from Pseudomonas aeruginosa
Classification: GENE REGULATION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-07-26
Authors: Gan, J.H., Yang, C., Chen, G.K., Liang, H.H.
PDB entry 6kkr: human KCC1 structure determined in KCl and detergent GDN
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-07-27
Authors: Liu, S., Chang, S., Ye, S., Bai, X., Guo, J.
PDB entry 6kks: Structural insights into target DNA recognition by R2R3-type MYB transcription factor
Classification: DNA BINDING PROTEIN/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-07-27
Authors: Wang, B., Luo, Q.
PDB entry 6kkt: human KCC1 structure determined in KCl and lipid nanodisc
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-07-27
Authors: Liu, S., Chang, S., Ye, S., Bai, X., Guo, J.
PDB entry 6kku: human KCC1 structure determined in NaCl and GDN
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2019-07-27
Authors: Liu, S., Chang, S., Ye, S., Bai, X., Guo, J.
PDB entry 6kkv: Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
Classification: LIGASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2019-07-27
Authors: Ramachandran, R., Shukla, A., Afsar, M.
PDB entry 6kkw: Crystal structure of the complex of phosphopantetheine adenylyl transferase from Acinetobacter baumannii with Dephospho Coenzyme at 3.2 A resolution.
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.202 Å
Deposited: 2019-07-27
Authors: Viswanathan, V., Gupta, A., Sharma, S., Singh, T.P.
PDB entry 6kkz: Crystal structure of the S65T/F99S/M153T/V163A variant of perdeuterated GFP at pD 8.5
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2019-07-28
Authors: Tai, Y., Takaba, K., Hanazono, Y., Dao, H.A., Miki, K., Takeda, K.
PDB entry 6kl0: Crystal structure of the S65T/F99S/M153T/V163A variant of perdeuterated GFP at pD 7.0
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 0.798 Å
Deposited: 2019-07-28
Authors: Tai, Y., Takaba, K., Hanazono, Y., Miki, K., Takeda, K.
PDB entry 6kl1: Crystal structure of the S65T/F99S/M153T/V163A variant of non-deuterated GFP at pD 8.5
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 0.851 Å
Deposited: 2019-07-28
Authors: Tai, Y., Takaba, K., Hanazono, Y., Dao, H.A., Miki, K., Takeda, K.
PDB entry 6kl2: Structure of the N-terminal domain of Middle East respiratory syndrome coronavirus nucleocapsid protein
Classification: VIRAL PROTEIN
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2019-07-29
Authors: Hou, M.H., Wang, Y.S., Lin, S.M., Hsu, J.N.
PDB entry 6kl4: Crystal structure of MavC-UBE2N-Ub
Classification: TRANSFERASE
Source organism: Homo sapiens; Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2019-07-29
Authors: Ouyang, S., Guan, H.
PDB entry 6kl5: Structure of The N-terminal domain of Middle East respiratory syndrome coronavirus Nucleocapsid Protein complexed with Benzyl 2-(Hydroxymethyl)-1-Indolinecarboxylate
Classification: VIRAL PROTEIN
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2019-07-29
Authors: Hou, M.H., Lin, S.M., Hsu, J.N., Wang, Y.S.
PDB entry 6kl6: Crystal structure of MERS-CoV N-NTD complexed with 5-Benzyloxygramine
Classification: VIRAL PROTEIN
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2019-07-29
Authors: Hou, M.H., Lin, S.M., Wang, Y.S., Hsu, J.N.
PDB entry 6kl7: Beta-arrestin 1 mutant S13D/T275D
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.794 Å
Deposited: 2019-07-29
Authors: Kang, H., Choi, H.J.
PDB entry 6kl8: Crystal structure of Piptidyl t-RNA hydrolase from Acinetobacter baumannii with bound NaCl at the substrate binding site
Classification: HYDROLASE
Source organism: Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2019-07-29
Authors: Viswanathan, V., Sharma, P., Singh, P.K., Sharma, S., Singh, T.P.
PDB entry 6kl9: Structure of LbCas12a-crRNA complex bound to AcrVA4 (form A complex)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Lachnospiraceae bacterium; Moraxella bovoculi; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2019-07-30
Authors: Peng, R., Li, Z., Xu, Y., He, S., Peng, Q., Shi, Y., Gao, G.F.
PDB entry 6kla: Crystal structure of human c-KIT kinase domain in complex with compound 15a
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.109 Å
Deposited: 2019-07-30
Authors: Wu, T.S., Peng, Y.H., Hsueh, C.C., Wu, S.Y.
PDB entry 6klb: Structure of LbCas12a-crRNA complex bound to AcrVA4 (form B complex)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Lachnospiraceae bacterium; Moraxella bovoculi; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2019-07-30
Authors: Peng, R., Li, Z., Xu, Y., He, S., Peng, Q., Shi, Y., Gao, G.F.
PDB entry 6klc: Structure of apo Lassa virus polymerase
Classification: VIRAL PROTEIN
Source organism: Lassa mammarenavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-07-30
Authors: Peng, R., Xu, X., Jing, J., Peng, Q., Gao, G.F., Shi, Y.
PDB entry 6kld: Structure of apo Machupo virus polymerase
Classification: VIRAL PROTEIN
Source organism: Machupo virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2019-07-30
Authors: Peng, R., Xu, X., Jing, J., Peng, Q., Gao, G.F., Shi, Y.
PDB entry 6kle: Monomeric structure of Machupo virus polymerase bound to vRNA promoter
Classification: VIRAL PROTEIN/RNA
Source organism: Machupo virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2019-07-30
Authors: Peng, R., Xu, X., Jing, J., Peng, Q., Gao, G.F., Shi, Y.
PDB entry 6klf: Crystal structure of branching enzyme D434A mutant from Cyanothece sp. ATCC 51142
Classification: TRANSFERASE
Source organism: Crocosphaera subtropica ATCC 51142
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-07-30
Authors: Suzuki, R., Suzuki, E.
PDB entry 6klg: Crystal Structure of the Zea Mays laccase 3
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-07-30
Authors: Xie, T., Liu, Z.C., Wang, G.G.
PDB entry 6klh: Dimeric structure of Machupo virus polymerase bound to vRNA promoter
Classification: VIRAL PROTEIN/RNA
Source organism: Machupo virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-07-30
Authors: Peng, R., Xu, X., Jing, J., Peng, Q., Gao, G.F., Shi, Y.
PDB entry 6kli: Crystal Structure of the Zea Mays laccase 3 complexed with sinapyl
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-07-30
Authors: Xie, T., Liu, Z.C., Wang, G.G.
PDB entry 6klj: Crystal Structure of the Zea Mays laccase 3 complexed with coniferyl
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.998 Å
Deposited: 2019-07-30
Authors: Xie, T., Liu, Z.C., Wang, G.G.
PDB entry 6klk: Crystal structure of the Pseudomonas aeruginosa dihydropyrimidinase complexed with 5-FU
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.759 Å
Deposited: 2019-07-30
Authors: Huang, Y.H., Chen, I.C., Huang, C.Y.
PDB entry 6kll: F-actin of cardiac thin filament in low-calcium state
Classification: CONTRACTILE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2019-07-30
Authors: Oda, T., Yanagisawa, H., Wakabayashi, T.
PDB entry 6klm: NMR solution structure of Roseltide rT7
Classification: PLANT PROTEIN
Source organism: Hibiscus sabdariffa
Experimental method: SOLUTION NMR
Deposited: 2019-07-30
Authors: Fan, J.S., Kam, A., Loo, S., Yang, D., Tam, P.J.
PDB entry 6kln: F-actin of cardiac thin filament in high-calcium state
Classification: CONTRACTILE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-07-30
Authors: Oda, T., Yanagisawa, H., Wakabayashi, T.
PDB entry 6klo: Complex structure of Iota toxin enzymatic component (Ia) and binding component (Ib) pore with short stem
Classification: TOXIN
Source organism: Clostridium perfringens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2019-07-30
Authors: Yoshida, T., Yamada, T., Kawamoto, A., Mitsuoka, K., Iwasaki, K., Tsuge, H.
PDB entry 6klp: Tropomyosin of cardiac thin filament in low-calcium state
Classification: CONTRACTILE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.6 Å
Deposited: 2019-07-30
Authors: Oda, T., Yanagisawa, H., Wakabayashi, T.
PDB entry 6klq: Tropomyosin of cardiac thin filament in high-calcium state
Classification: CONTRACTILE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.7 Å
Deposited: 2019-07-30
Authors: Oda, T., Yanagisawa, H., Wakabayashi, T.
PDB entry 6klr: Crystal structure of human WIPI3 in complex with the WIR-peptide from ATG2A
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2019-07-30
Authors: Ren, J.Q., Liang, R.B., Feng, W.
PDB entry 6kls: Hyperthermophilic respiratory Complex III
Classification: OXIDOREDUCTASE
Source organism: Aquifex aeolicus; Aquifex aeolicus (strain VF5)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-07-30
Authors: Fei, S., Hartmut, M., Yun, Z., Guohong, P., Guoliang, Z., Hui, Z., Shuangbo, Z., Xiaoyun, P., Yan, Z.
PDB entry 6klt: Troponin of cardiac thin filament in low-calcium state
Classification: CONTRACTILE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 12 Å
Deposited: 2019-07-30
Authors: Oda, T., Yanagisawa, H., Wakabayashi, T.
PDB entry 6klu: Troponin of cardiac thin filament in high-calcium state
Classification: CONTRACTILE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 12 Å
Deposited: 2019-07-30
Authors: Oda, T., Yanagisawa, H., Wakabayashi, T.
PDB entry 6klv: Hyperthermophilic respiratory Complex III
Classification: OXIDOREDUCTASE
Source organism: Aquifex aeolicus; Aquifex aeolicus (strain VF5)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-07-30
Authors: Fei, S., Hartmut, M., Yun, Z., Guohong, P., Guoliang, Z., Hui, Z., Shuangbo, Z., Xiaoyun, P., Yan, Z.
PDB entry 6klw: Complex structure of Iota toxin enzymatic component (Ia) and binding component (Ib) pore with long stem
Classification: TOXIN
Source organism: Clostridium perfringens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-07-30
Authors: Yoshida, T., Yamada, T., Kawamoto, A., Mitsuoka, K., Iwasaki, K., Tsuge, H.
PDB entry 6klx: Pore structure of Iota toxin binding component (Ib)
Classification: TOXIN
Source organism: Clostridium perfringens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-07-30
Authors: Yoshida, T., Yamada, T., Kawamoto, A., Mitsuoka, K., Iwasaki, K., Tsuge, H.
PDB entry 6kly: Crystal structure of the type III effector XopAI from Xanthomonas axonopodis pv. citri in space group P43212
Classification: CELL INVASION
Source organism: Xanthomonas citri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2019-07-30
Authors: Liu, J.-H., Wu, J.E., Lin, H., Chiu, S.W., Yang, J.Y.
PDB entry 6klz: Human Carbonic Anhydrase II V143I variant 00 atm CO2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2019-07-30
Authors: Kim, C.U., Kim, J.K.
PDB entry 6km0: Human Carbonic Anhydrase II V143I variant 07 atm CO2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2019-07-30
Authors: Kim, C.U., Kim, J.K.
PDB entry 6km1: Human Carbonic Anhydrase II V143I variant 13 atm CO2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2019-07-30
Authors: Kim, C.U., Kim, J.K.
PDB entry 6km2: Human Carbonic Anhydrase II V143I variant 15 atm CO2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2019-07-30
Authors: Kim, C.U., Kim, J.K.
PDB entry 6km3: Human Carbonic Anhydrase II native 00 atm CO2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2019-07-30
Authors: Kim, C.U., Kim, J.K.
PDB entry 6km4: Human Carbonic Anhydrase II native 07 atm CO2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2019-07-30
Authors: Kim, C.U., Kim, J.K.
PDB entry 6km5: Human Carbonic Anhydrase II native 13 atm CO2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.151 Å
Deposited: 2019-07-30
Authors: Kim, C.U., Kim, J.K.
PDB entry 6km6: Human Carbonic Anhydrase II native 15 atm CO2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2019-07-30
Authors: Kim, C.U., Kim, J.K.
PDB entry 6km7: The structural basis for the internal interaction in RBBP5
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2019-07-31
Authors: Han, J., Li, T., Chen, Y.
PDB entry 6km8: Crystal Structure of Momordica charantia 7S globulin
Classification: PLANT PROTEIN
Source organism: Momordica charantia
Experimental method: X-RAY DIFFRACTION
Resolution: 3.099 Å
Deposited: 2019-07-31
Authors: Kesari, P., Pratap, S., Dhankhar, P., Dalal, V., Kumar, P.
PDB entry 6km9: Crystal structure of SucA from Vibrio vulnificus
Classification: OXIDOREDUCTASE
Source organism: Vibrio vulnificus (strain CMCP6)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.724 Å
Deposited: 2019-07-31
Authors: Seo, P.W., Kim, J.S.
PDB entry 6kma: Crystal structure of SucA with glycolaldehyde-1-13C from Vibrio vulnificus
Classification: OXIDOREDUCTASE
Source organism: Vibrio vulnificus (strain CMCP6)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.282 Å
Deposited: 2019-07-31
Authors: Seo, P.W., Kim, J.S.
PDB entry 6kmb: Crystal structure of Sth1 bromodomain
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-07-31
Authors: Chen, G., Li, W., Yan, F., Wang, D., Chen, Y.
PDB entry 6kmc: Crystal structure of a Streptococcal protein G B1 mutant
Classification: IMMUNE SYSTEM
Source organism: Streptococcus sp. 'group G'
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2019-07-31
Authors: Watanabe, H., Honda, S.
PDB entry 6kmd: Crystal structure of SeMet-phytochromobilin synthase from tomato in complex with biliverdin
Classification: OXIDOREDUCTASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-07-31
Authors: Sugishima, M., Wada, K., Fukuyama, K.
PDB entry 6kme: Crystal structure of phytochromobilin synthase from tomato in complex with biliverdin
Classification: OXIDOREDUCTASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-07-31
Authors: Sugishima, M., Wada, K., Fukuyama, K.
PDB entry 6kmf: FimA type V pilus from P.gingivalis
Classification: CELL ADHESION
Source organism: Porphyromonas gingivalis ATCC 33277
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2019-07-31
Authors: Shibata, S., Shoji, M., Matsunami, H., Matthews, M., Imada, K., Nakayama, K., Wolf, M.
PDB entry 6kmh: The crystal structure of CASK/Mint1 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-07-31
Authors: Li, W., Feng, W.
PDB entry 6kmj: Crystal structure of Sth1 bromodomain in complex with H3K14Ac
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2019-07-31
Authors: Chen, G., Li, W., Yan, F., Wang, D., Chen, Y.
PDB entry 6kmk: Crystal structure of hydrogen peroxide bound bovine lactoperoxidase at 2.3 A resolution
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-07-31
Authors: Singh, P.K., Sirohi, H.V., Bhusan, A., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 6kml: 2.09 Angstrom resolution crystal structure of tetrameric HigBA toxin-antitoxin complex from E.coli
Classification: TOXIN/ANTITOXIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.095 Å
Deposited: 2019-07-31
Authors: Jadhav, P., Sinha, V.K., Rothweiler, U., Singh, M.
PDB entry 6kmm: Crystal Structure of HEPES bound Dye Decolorizing peroxidase from Bacillus subtilis
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2019-07-31
Authors: Dhankhar, P., Dalal, V., Mahto, J.K., Kumar, P.
PDB entry 6kmn: Crystal Structure of Dye Decolorizing peroxidase from Bacillus subtilis
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2019-07-31
Authors: Dhankhar, P., Dalal, V., Mahto, J.K., Kumar, P.
PDB entry 6kmo: Crystal structure of a novel esterase CinB from Enterobacter asburiae
Classification: HYDROLASE
Source organism: Enterobacter asburiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2019-07-31
Authors: Shang, F., Xu, Y.
PDB entry 6kmp: 100K X-ray structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with tetrahedral intermediate mimic KVS-1
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2019-07-31
Authors: Das, A., Kovalevsky, A.
PDB entry 6kmq: 2.3 Angstrom resolution structure of dimeric HigBA toxin-antitoxin complex from E. coli
Classification: TOXIN/ANTITOXIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-07-31
Authors: Jadhav, P., Sinha, V.K., Rothweiler, U., Singh, M.
PDB entry 6kmr: Crystal structure of human N6amt1-Trm112 in complex with SAM (space group P6122)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-08-01
Authors: Li, W.J., Shi, Y., Zhang, T.L., Ye, J., Ding, J.P.
PDB entry 6kms: Crystal structure of human N6amt1-Trm112 in complex with SAM (space group I422)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2019-08-01
Authors: Li, W.J., Shi, Y., Zhang, T.L., Ye, J., Ding, J.P.
PDB entry 6kmt: P32 of caspase-11 mutant C254A
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-08-01
Authors: Ding, J., Sun, Q.
PDB entry 6kmu: P22/P10 complex of caspase-11 mutant C254A
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-08-01
Authors: Ding, J., Sun, Q.
PDB entry 6kmv: caspase-11 C254A P22/P10 in complex with mouse GSDMD-C domain
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2019-08-01
Authors: Ding, J., Sun, Q.
PDB entry 6kmw: Structure of PSI from H. hongdechloris grown under white light condition
Classification: ELECTRON TRANSPORT
Source organism: Halomicronema hongdechloris C2206
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2019-08-01
Authors: Kato, K., Nagao, R., Shen, J.R., Miyazaki, N., Akita, F.
PDB entry 6kmx: Structure of PSI from H. hongdechloris grown under far-red light condition
Classification: ELECTRON TRANSPORT
Source organism: Halomicronema hongdechloris C2206
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2019-08-01
Authors: Kato, K., Nagao, R., Shen, J.R., Miyazaki, N., Akita, F.
PDB entry 6kmy: Structure of single disulfide peptide Czon1107-P5A
Classification: NEUROPEPTIDE
Experimental method: SOLUTION NMR
Deposited: 2019-08-01
Authors: Sarma, S.P., Madhan Kumar, M.
PDB entry 6kmz: caspase-4 P22/P10 C258A in complex with human GSDMD-C domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.61 Å
Deposited: 2019-08-01
Authors: Ding, J., Sun, Q.
PDB entry 6kn0: caspase-1 P20/P10 C285A in complex with human GSDMD-C domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.793 Å
Deposited: 2019-08-02
Authors: Ding, J., Sun, Q.
PDB entry 6kn1: P20/P12 of caspase-11 mutant C254A
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-08-02
Authors: Ding, J., Sun, Q.
PDB entry 6kn2: Structure of single disulfide peptide Czon1107-WT (major conformer)
Classification: NEUROPEPTIDE
Experimental method: SOLUTION NMR
Deposited: 2019-08-02
Authors: Sarma, S.P., Madhan Kumar, M.
PDB entry 6kn3: Structure of single disulfide peptide Czon1107-WT (minor conformer)
Classification: NEUROPEPTIDE
Experimental method: SOLUTION NMR
Deposited: 2019-08-02
Authors: Sarma, S.P., Madhan Kumar, M.
PDB entry 6kn4: HUMAN PARALLEL STRANDED 7-MER G-QUADRUPLEX COMPLEXED WITH 2 ADRIAMYCIN (DM2) MOLECULES
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2019-08-03
Authors: Barthwal, R., Raje, S., Pandav, K.
PDB entry 6kn5: Crystal structure of AFF4 C-terminal domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-08-03
Authors: Chen, L.J., Yang, W.S., Xu, R.M.
PDB entry 6kn7: Structure of human cardiac thin filament in the calcium free state
Classification: CONTRACTILE PROTEIN/ACTIN BINDING PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.6 Å
Deposited: 2019-08-03
Authors: Fujii, T., Yamada, Y., Namba, K.
PDB entry 6kn8: Structure of human cardiac thin filament in the calcium bound state
Classification: CONTRACTILE PROTEIN/ACTIN BINDING PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2019-08-03
Authors: Fujii, T., Yamada, Y., Namba, K.
PDB entry 6kn9: Crystal structure of human interleukin 18 receptor beta extracellular domain in complex with an antagonistic scFv
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.302 Å
Deposited: 2019-08-05
Authors: Wu, D.H., Liu, C.C.
PDB entry 6kna: Viral Ubiquitin from Autographa californica Nucleo Polyhedrosis Virus
Classification: VIRAL PROTEIN
Source organism: Autographa californica multiple nucleopolyhedrovirus
Experimental method: SOLUTION NMR
Deposited: 2019-08-05
Authors: Negi, H., Reddy, P.P., Das, R.
PDB entry 6knb: PolD-PCNA-DNA (form A)
Classification: REPLICATION/DNA
Source organism: Thermococcus kodakarensis; Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.9 Å
Deposited: 2019-08-05
Authors: Mayanagi, K., Oki, K., Miyazaki, N., Ishino, S., Yamagami, T., Iwasaki, K., Kohda, D., Morikawa, K., Shirai, T., Ishino, Y.
PDB entry 6knc: PolD-PCNA-DNA (form B)
Classification: REPLICATION/DNA
Source organism: Thermococcus kodakarensis; Thermococcus kodakarensis KOD1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2019-08-05
Authors: Mayanagi, K., Oki, K., Miyazaki, N., Ishino, S., Yamagami, T., Iwasaki, K., Kohda, D., Morikawa, K., Shirai, T., Ishino, Y.
PDB entry 6knd: The C-terminal Domain of Translation Initiation Factor 5 at low pH
Classification: TRANSLATION
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-08-05
Authors: Jian, Y., YuXin, Y., Min, Y.
PDB entry 6kne: The C-terminal Domain of Translation Initiation Factor 5 at high pH
Classification: TRANSLATION
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2019-08-05
Authors: Jian, Y., YuXin, Y., Min, Y.
PDB entry 6knf: CryoEM map and model of Nitrite Reductase at pH 6.2
Classification: OXIDOREDUCTASE
Source organism: Achromobacter cycloclastes
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2019-08-05
Authors: Adachi, N., Yamaguchi, T., Moriya, T., Kawasaki, M., Koiwai, K., Shinoda, A., Yamada, Y., Yumoto, F., Kohzuma, T., Senda, T.
PDB entry 6kng: CryoEM map and model of Nitrite Reductase at pH 8.1
Classification: OXIDOREDUCTASE
Source organism: Achromobacter cycloclastes
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2019-08-05
Authors: Adachi, N., Yamaguchi, T., Moriya, T., Kawasaki, M., Koiwai, K., Shinoda, A., Yamada, Y., Yumoto, F., Kohzuma, T., Senda, T.
PDB entry 6knh: Crystal structure of SbnH in complex with citrate, a PLP-dependent decarboxylase in Staphyloferrin B biothesynthesis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2019-08-05
Authors: Tang, J., Ju, Y., Zhou, H.
PDB entry 6kni: Crystal structure of SbnH in complex with the cofactor PLP, a PLP-dependent decarboxylase in Staphyloferrin B biothesynthesis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2019-08-05
Authors: Tang, J., Ju, Y., Zhou, H.
PDB entry 6knj: UTP-bound UGPase from acinetobacter baumannii
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2019-08-05
Authors: Lee, J.H., Kang, L.W.
PDB entry 6knk: Crystal structure of SbnH in complex with citryl-diaminoethane
Classification: BIOSYNTHETIC PROTEIN
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-08-05
Authors: Tang, J., Ju, Y., Zhou, H.
PDB entry 6knl: Uridine and triphosphate-bound UGPase from acinetobacter baumannii
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2019-08-05
Authors: Lee, J.H., Kang, L.W.
PDB entry 6knm: Apelin receptor in complex with single domain antibody
Classification: MEMBRANE PROTEIN
Source organism: Camelus bactrianus; Clostridium pasteurianum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2019-08-06
Authors: Ma, Y.B., Ding, Y., Song, X., Ma, X., Li, X., Zhang, N., Song, Y., Sun, Y., Shen, Y., Zhong, W., Hu, L.A., Ma, Y.L., Zhang, M.Y.
PDB entry 6kno: Structure of single disulfide peptide Czon1107-P7A (minor conformer)
Classification: NEUROPEPTIDE
Experimental method: SOLUTION NMR
Deposited: 2019-08-06
Authors: Sarma, S.P., Madhan Kumar, M.
PDB entry 6knp: Structure of single disulfide peptide Czon1107-P7A(major conformer)
Classification: NEUROPEPTIDE
Experimental method: SOLUTION NMR
Deposited: 2019-08-06
Authors: Sarma, S.P., Madhan Kumar, M.
PDB entry 6knr: Crystal structure of Estrogen-related receptor gamma ligand-binding domain with DN200699
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.804 Å
Deposited: 2019-08-07
Authors: Yoon, H., Kim, J., Chin, J., Song, J., Cho, S.J.
PDB entry 6kns: Crystal structure of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis (space group I4122)
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-08-07
Authors: Na, H.W., Namgung, B., Song, W.S., Yoon, S.I.
PDB entry 6knt: Crystal structure of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis (space group P4332)
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-08-07
Authors: Na, H.W., Namgung, B., Song, W.S., Yoon, S.I.
PDB entry 6knu: THRb mutation with a novel agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-08-07
Authors: Yao, B.Q., Li, Y.
PDB entry 6knv: THRb mutation with a novel agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-08-07
Authors: Yao, B.Q., Li, Y.
PDB entry 6knw: THRb mutation with a novel agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2019-08-07
Authors: Yao, B.Q., Li, Y.
PDB entry 6kny: Structure of Amuc_1100 without transmembrane region from Akkermansia muciniphila
Classification: UNKNOWN FUNCTION
Source organism: Akkermansia muciniphila (strain ATCC BAA-835 / Muc)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-08-07
Authors: Mou, L.Q., Xiao, Q.J., Deng, D.
PDB entry 6knz: Crystal structure of T2R-TTL-KXO1 complex
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.475 Å
Deposited: 2019-08-07
Authors: Chen, Q., Yu, Y.
PDB entry 6ko0: The crystal structue of PDE10A complexed with 1i
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.60003 Å
Deposited: 2019-08-07
Authors: Huang, Y.-Y., Yu, Y.F., Zhang, C., Guo, L., Wu, D., Luo, H.-B.
PDB entry 6ko1: The crystal structue of PDE10A complexed with 2d
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-08-07
Authors: Huang, Y.-Y., Yu, Y.F., Zhang, C., Guo, L., Wu, D., Luo, H.-B.
PDB entry 6ko2: Crystal Structure of BRD4-Brmo2 in complex with H2A.ZK4acK7ac peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-08-07
Authors: Li, H.T., Zheng, S.P.
PDB entry 6ko5: Complex structure of Ghrelin receptor with Fab
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2019-08-08
Authors: Shiimura, Y., Horita, S., Asada, H., Hirata, K., Iwata, S., Kojima, M.
PDB entry 6ko6: Crystal structure of AMPPNP bound Cka1 from C. neoformans
Classification: TRANSFERASE
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-08-08
Authors: Cho, H.S., Yoo, Y.
PDB entry 6ko7: Crystal structure of the Ethidium bound RamR determined with XtaLAB Synergy
Classification: DNA BINDING PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-08-08
Authors: Matsumoto, T., Nakashima, R., Yamano, A., Nishino, K.
PDB entry 6ko8: Crystal structure of the Cholic acid bound RamR determined with XtaLAB Synergy
Classification: DNA BINDING PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-08-08
Authors: Matsumoto, T., Nakashima, R., Yamano, A., Nishino, K.
PDB entry 6ko9: Crystal structure of the Gefitinib Intermediate 1 bound RamR determined with XtaLAB Synergy
Classification: DNA BINDING PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-08-08
Authors: Matsumoto, T., Nakashima, R., Yamano, A., Nishino, K.
PDB entry 6kob: X-ray Structure of the proton-pumping cytochrome aa3-600 menaquinol oxidase from Bacillus subtilis
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis; Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2019-08-09
Authors: Xu, J., Ding, Z., Liu, B., Li, J., Gennis, R.B., Zhu, J.
PDB entry 6koc: X-ray Structure of the proton-pumping cytochrome aa3-600 menaquinol oxidase from Bacillus subtilis complexed with 3-iodo-N-oxo-2-heptyl-4-hydroxyquinoline
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis; Bacillus subtilis (strain 168); Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2019-08-09
Authors: Xu, J., Ding, Z., Liu, B., Li, J., Gennis, R.B., Zhu, J.
PDB entry 6kod: Cu(II) complex of HOCl-induced flavoprotein disulfide reductase RclA C43S mutant from Escherichia coli
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-08-09
Authors: Baek, Y., Ha, N.-C.
PDB entry 6koe: X-ray Structure of the proton-pumping cytochrome aa3-600 menaquinol oxidase from Bacillus subtilis
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.75 Å
Deposited: 2019-08-09
Authors: Xu, J., Ding, Z., Liu, B., Li, J., Gennis, R.B., Zhu, J.
PDB entry 6kof: Crystal structure of indoleamine 2,3-dioxygenagse 1 (IDO1) in complex with compound 47
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.263 Å
Deposited: 2019-08-09
Authors: Peng, Y.H., Wu, S.Y.
PDB entry 6kog: Ketosynthase domain in tenuazonic acid synthetase 1 (TAS1).
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pyricularia oryzae 70-15
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2019-08-10
Authors: Yun, C.S., Nishimoto, K., Motoyama, T., Hino, T., Nagano, S., Osada, H.
PDB entry 6koi: Crystal structure of SNX11-PXe domain in dimer form.
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2019-08-11
Authors: Xu, T., Xu, J., Liu, J.
PDB entry 6koj: Crystal structure of SNX11-PXe domain in complex with PI(3,5)P2
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2019-08-11
Authors: Xu, T., Liu, J.
PDB entry 6kok: Crystal Structure of SNX11/SNX10-PXe Chimera
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-08-11
Authors: Xu, T., Liu, J.
PDB entry 6kol: Crystal structure of auracyanin from photosynthetic bacterium Roseiflexus castenholzii
Classification: METAL BINDING PROTEIN
Source organism: Roseiflexus castenholzii (strain DSM 13941 / HLO8)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.211 Å
Deposited: 2019-08-12
Authors: Wang, C., Zhang, C.Y., Min, Z.Z., Xin, Y.Y., Xu, X.L.
PDB entry 6kon: Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 5 nt
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-08-12
Authors: Li, L., Zhang, Y.
PDB entry 6koo: Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 7 nt
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-08-12
Authors: Li, L., Zhang, Y.
PDB entry 6kop: Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv); Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.303 Å
Deposited: 2019-08-12
Authors: Li, L., Zhang, Y.
PDB entry 6koq: Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 10 nt
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.353 Å
Deposited: 2019-08-12
Authors: Li, L., Zhang, Y.
PDB entry 6kor: Crystal structure of the RRM domain of SYNCRIP
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.602 Å
Deposited: 2019-08-12
Authors: Chen, Y., Chan, J., Chen, W., Jobichen, C.
PDB entry 6kos: Crystal structure of SUWA (Super WA20), a hyper-stable de novo protein with a dimeric bisecting topology
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-08-13
Authors: Kimura, N., Arai, R.
PDB entry 6kot: Quadruple mutant (N51I+C59R+S108N+I164L) plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with B12128 and NADPH
Classification: OXIDOREDUCTASE,TRANSFERASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.149 Å
Deposited: 2019-08-13
Authors: Vanichtanankul, J., Vitsupakorn, D.
PDB entry 6kou: 277 K cryoEM structure of Sso-KARI in complex with magnesium ions
Classification: ISOMERASE
Source organism: Saccharolobus solfataricus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2019-08-13
Authors: Chen, C.Y., Chang, Y.C., Lin, B.L., Huang, C.H., Tsai, M.D.
PDB entry 6kow: Retracted state of S65/T66 double-phosphorylated ubiquitin
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2019-08-13
Authors: Dong, X., Tang, C.
PDB entry 6kox: Relaxed state of S65/T66 double-phosphorylated ubiquitin
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2019-08-13
Authors: Dong, X., Tang, C.
PDB entry 6koy: Crystal structure of two domain M1 Zinc metallopeptidase E323A mutant bound to L-tryptophan amino acid
Classification: HYDROLASE
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-08-13
Authors: Agrawal, R., Kumar, A., Kumar, A., Makde, R.D.
PDB entry 6koz: Crystal structure of two domain M1 zinc metallopeptidase E323 mutant bound to L-Leucine amino acid
Classification: HYDROLASE
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2019-08-13
Authors: Agrawal, R., Kumar, A., Kumar, A., Makde, R.D.
PDB entry 6kp0: Crystal structure of two domain M1 zinc metallopeptidase E323A mutant bound to L-arginine
Classification: HYDROLASE
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-08-13
Authors: Agrawal, R., Kumar, A., Kumar, A., Makde, R.D.
PDB entry 6kp1: Crystal structure of two domain M1 zinc metallopeptidase E323A mutant bound to L-methionine amino acid
Classification: HYDROLASE
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2019-08-13
Authors: Agrawal, R., Kumar, A., Kumar, A., Makde, R.D.
PDB entry 6kp2: Quadruple mutant plasmodium falciparum dihydrofolate reductase complexed with B10042
Classification: OXIDOREDUCTASE,TRANSFERASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.973 Å
Deposited: 2019-08-14
Authors: Vanichtanankul, J., Vitsupakorn, D.
PDB entry 6kp3: STRUCTURE OF SENDAI VIRUS Y3/ALIX-BRO1 DOMAIN COMPLEX
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Murine respirovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-08-14
Authors: Oda, K., Matoba, Y., Sakaguchi, T.
PDB entry 6kp5: crystal structure of Xanthine-guanine phosphoribosyltransferase (XGPRT) from Yersinia pestis in P21212 space group with sulphate ions in the active site
Classification: TRANSFERASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2019-08-14
Authors: Lankipalli, S., Ramagopal, U.A.
PDB entry 6kp6: The structural study of mutation induced inactivation of Human muscarinic receptor M4
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Pyrococcus abyssi GE5
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-08-14
Authors: Wang, J.J., Wu, M., Wu, L.J., Liu, Z.J., Hua, T.
PDB entry 6kp7: Quadruple mutant (N51I+C59R+S108N+I164L) plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with B12154
Classification: OXIDOREDUCTASE,TRANSFERASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2019-08-14
Authors: Vanichtanankul, J., Vitsupakorn, D.
PDB entry 6kpa: 277 K cryoEM structure of Sso-KARI in complex with Mg2+, NADH and CPD
Classification: ISOMERASE
Source organism: Saccharolobus solfataricus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2019-08-15
Authors: Chen, C.Y., Chang, Y.C., Lin, B.L., Huang, C.H., Tsai, M.D.
PDB entry 6kpb: The crystal structure of the JACKDAW/IDD10 bound to the homodimeric SCL3
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-08-15
Authors: Hirano, Y., Hakoshima, T.
PDB entry 6kpc: Crystal structure of an agonist bound GPCR
Classification: MEMBRANE PROTEIN
Source organism: Enterobacteria phage RB59; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2019-08-15
Authors: Li, X.T., Hua, T., Wu, L.J., Makriyannis, A., Wu, M., Liu, Z.J.
PDB entry 6kpd: The crystal structure of the BALDIBIS/IDD9 bound to the homodimeric SCL3
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2019-08-15
Authors: Hirano, Y., Shimizu, R., Hakoshima, T.
PDB entry 6kpe: 343 K cryoEM structure of Sso-KARI in complex with Mg2+
Classification: ISOMERASE
Source organism: Saccharolobus solfataricus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2019-08-15
Authors: Chen, C.Y., Chang, Y.C., Lin, B.L., Huang, C.H., Tsai, M.D.
PDB entry 6kpf: Cryo-EM structure of a class A GPCR with G protein complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-08-15
Authors: Li, X.T., Hua, T., Wu, L.J., Makriyannis, A., Shen, L., Wang, Y.X., Liu, Z.J.