LiteFold/PDB huggingface dataset:
PDB entry 6ag9: Crystal structure of uPA in complex with 3,5-bis(azanyl)-6-(1-benzofuran-2-yl)-N-carbamimidoyl-pyrazine-2- carboxamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2018-08-09
Authors: Buckley, B., Jiang, L.G., Majed, H., Huang, M.D., Kelso, M., Ranson, M.
PDB entry 6agb: Cryo-EM structure of yeast Ribonuclease P
Classification: HYDROLASE/RNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2018-08-10
Authors: Lan, P., Tan, M., Wu, J., Lei, M.
PDB entry 6agf: Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2018-08-11
Authors: Pan, X.J., li, Z.Q., Zhou, Q., Shen, H.Z., Wu, K., Huang, X.S., Chen, J.F., Zhang, J.R., Zhu, X.C., Lei, J.L., Xiong, W., Gong, H.P., Xiao, B.L., Yan, N.
PDB entry 6agg: Crystal structure of agmatine-AMPPCP-Mg complexed TiaS (tRNAIle2 agmatidine synthetase)
Classification: LIGASE
Source organism: Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.706 Å
Deposited: 2018-08-11
Authors: Dong, J.S., Gong, W.M.
PDB entry 6agh: Crystal structure of EFHA1 in Apo-State
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.742 Å
Deposited: 2018-08-11
Authors: Yangfei, X., Xue, Y., Yuequan, S.
PDB entry 6agi: Crystal Structure of EFHA2 in Ca-binding State
Classification: CALCIUM BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.799 Å
Deposited: 2018-08-11
Authors: Yangfei, X., Xue, Y., Yuequan, S.
PDB entry 6agj: Crystal Structure of EFHA2 in Apo State
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.999 Å
Deposited: 2018-08-11
Authors: Yangfei, X., Xue, Y., Yuequan, S.
PDB entry 6agk: The structure of CH-II-77-tubulin complex
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-08-13
Authors: Chen, H., Arnst, K., Wang, Y., Miller, D., Li, W.
PDB entry 6agl: Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-08-13
Authors: Cui, D., Qi, J., Wen, T.
PDB entry 6agm: Molecular basis for feedback inhibition of tyrosine-regulated 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase from Escherichia coli
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-13
Authors: Cui, D., Qi, J., Wen, T.
PDB entry 6agn: Structure of HEWL co-crystallised with Cinnamaldehyde
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2018-08-13
Authors: Seyedarabi, A., Seraj, Z.
PDB entry 6ago: Crystal structure of MRG15-ASH1L Histone methyltransferase complex
Classification: TRANSFERASE/GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.103 Å
Deposited: 2018-08-13
Authors: Lee, Y., Song, J.
PDB entry 6agp: Structure of Rac1 in the low-affinity state for Mg2+
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2018-08-13
Authors: Toyama, Y., Kontani, K., Katada, T., Shimada, I.
PDB entry 6agq: Acetyl xylan esterase from Paenibacillus sp. R4
Classification: HYDROLASE
Source organism: Paenibacillus sp. R4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-08-13
Authors: Park, S., Lee, C.W., Lee, J.H.
PDB entry 6agr: Structure of HEWL co-crystallised with phenylethyl alcohol
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2018-08-13
Authors: Seyedarabi, A., Seraj, Z.
PDB entry 6ags: Structural insights for non-natural cofactor binding by the L310R/Q401C mutant of malic enzyme from Escherichia coli
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2018-08-13
Authors: Liu, Y.X., Liu, W.J., Ji, D.B., Zhao, K.
PDB entry 6agt: Crystal structure of PfKRS complexed with chromone inhibitor
Classification: LIGASE/INHIBITOR
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.953 Å
Deposited: 2018-08-14
Authors: Yogavel, M., Sharma, A., Sharma, A., Baragana, B., Walpole, C.
PDB entry 6agv: Crystal structure of apo mouse MsrA
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2018-08-14
Authors: Hwang, K.Y., Kim, J.S.
PDB entry 6agw: Pro-domain of Caspase-8
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.093 Å
Deposited: 2018-08-15
Authors: Park, H.H.
PDB entry 6agx: The cocrystal structure of FGFR2 bound with compound 14 harboring 5H-pyrrolo[2,3-b]pyrazine scaffold
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2018-08-15
Authors: Xiong, B.
PDB entry 6agy: Aspergillus fumigatus Af293 NDK
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-15
Authors: Hu, Y., Han, L.
PDB entry 6agz: Crystal structure of Old Yellow Enzyme from Pichia sp. AKU4542
Classification: OXIDOREDUCTASE
Source organism: Pichia
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-15
Authors: Horita, S., Kataoka, M., Kitamura, N., Nakagawa, T., Miyakawa, T., Ohtsuka, J., Nagata, K., Shimizu, S., Tanokura, M.
PDB entry 6ah0: The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex)
Classification: SPLICING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.7 Å
Deposited: 2018-08-15
Authors: Zhan, X., Yan, C., Zhang, X., Shi, Y.
PDB entry 6ah3: Cryo-EM structure of yeast Ribonuclease P with pre-tRNA substrate
Classification: HYDROLASE/RNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Saccharomyces cerevisiae S288c
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2018-08-16
Authors: Lan, P., Tan, M., Wu, J., Lei, M.
PDB entry 6ah4: Structure of human P2X3 receptor in complex with ATP and Ca2+ ion
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.296 Å
Deposited: 2018-08-16
Authors: Hattori, M.
PDB entry 6ah5: Structure of human P2X3 receptor in complex with ATP and Mg2+ ion
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.819 Å
Deposited: 2018-08-16
Authors: Hattori, M.
PDB entry 6ah6: M500V mutant of Coronin coiled coil domain
Classification: STRUCTURAL PROTEIN
Source organism: Leishmania donovani
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-08-16
Authors: Ansari, A., Karade, S.S., Pratap, J.V.
PDB entry 6ah7: D45W/H226G mutant of marine bacterial prolidase
Classification: HYDROLASE
Source organism: Pseudoalteromonas lipolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2018-08-17
Authors: Jian, Y., Yunzhu, X., Lijuan, L.
PDB entry 6ah8: Marine bacterial prolidase with promiscuous organophosphorus hydrolase activity
Classification: HYDROLASE
Source organism: Pseudoalteromonas lipolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2018-08-17
Authors: Jian, Y.
PDB entry 6ah9: Crystal structure of enoyl-ACP reductase from Acinetobacter baumannii in complex with NAD and Triclosan
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2018-08-17
Authors: Rani, S.T., Nataraj, V., Laxminarasimhan, A., Thomas, A., Krishnamurthy, N.
PDB entry 6ahc: Cryo-EM structure of aldehyde-alcohol dehydrogenase reveals a high-order helical architecture critical for its activity
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2018-08-17
Authors: Kim, G., Song, J.J.
PDB entry 6ahd: The Cryo-EM Structure of Human Pre-catalytic Spliceosome (B complex) at 3.8 angstrom resolution
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2018-08-17
Authors: Zhan, X., Yan, C., Zhang, X., Shi, Y.
PDB entry 6ahe: Crystal structure of enoyl-ACP reductase from Acinetobacter baumannii in complex with NAD and AFN-1252
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2018-08-17
Authors: Rani, S.T., Nataraj, V., Laxminarasimhan, A., Thomas, A., Krishnamurthy, N.
PDB entry 6ahf: CryoEM Reconstruction of Hsp104 N728A Hexamer
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae S288c
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.78 Å
Deposited: 2018-08-17
Authors: Zhang, X., Zhang, L., Zhang, S.
PDB entry 6ahg: Trimeric structure of concanavalin A from Canavalia ensiformis
Classification: SUGAR BINDING PROTEIN
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2018-08-18
Authors: Park, J.H., Kim, D.S., Park, Y.R., Lee, S.J.
PDB entry 6ahh: Crystal Structure of HEWL in complex with Phenylethyl alcohol (in the aroma form) after 5 hours under fibrillation conditions
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-08-18
Authors: Seraj, Z., Seyedarabi, A.
PDB entry 6ahi: Crystal structure of O-acetylserine dependent cystathionine beta-synthase from Helicobacter pylori.
Classification: TRANSFERASE
Source organism: Helicobacter pylori (strain ATCC 700392 / 26695)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-08-19
Authors: Tarique, F.K., Devi, S., Rehman, S.A.A.
PDB entry 6ahl: Crystal Structure of HEWL in complex with Cinnamaldehyde (in the aroma form) after 5 hours under fibrillation conditions
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-19
Authors: Seraj, Z., Seyedarabi, A.
PDB entry 6aho: Crystal structure of Kap114p
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.502 Å
Deposited: 2018-08-20
Authors: Liao, C.C., Shankar, S., Ahmed, G.R., Hsia, K.C.
PDB entry 6ahp: Structure of the 58-167 fragment of FliL
Classification: MOTOR PROTEIN
Source organism: Vibrio alginolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-08-20
Authors: Takekawa, N., Isumi, M., Sakuma, M., Kojima, S., Homma, M., Imada, K.
PDB entry 6ahq: Structure of the 40-167 fragment of FliL
Classification: MOTOR PROTEIN
Source organism: Vibrio alginolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.398 Å
Deposited: 2018-08-20
Authors: Takekawa, N., Isumi, M., Sakuma, M., Kojima, S., Homma, M., Imada, K.
PDB entry 6ahr: Cryo-EM structure of human Ribonuclease P
Classification: HYDROLASE/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2018-08-20
Authors: Wu, J., Niu, S., Tan, M., Lan, P., Lei, M.
PDB entry 6ahs: Mouse Kallikrein 7 in complex with imidazolinylindole derivative
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-08-20
Authors: Sugawara, H.
PDB entry 6aht: Plasmid partitioning protein TubR from Bacillus cereus
Classification: TRANSCRIPTION
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-20
Authors: Hayashi, I.
PDB entry 6ahu: Cryo-EM structure of human Ribonuclease P with mature tRNA
Classification: HYDROLASE/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2018-08-20
Authors: Wu, J., Niu, S., Tan, M., Lan, P., Lei, M.
PDB entry 6ahv: Crystal structure of human RPP40
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-08-20
Authors: Wu, J., Niu, S., Tan, M., Lan, P., Lei, M.
PDB entry 6ahw: Crystal structure of circular-permutated YibK methyltransferase from Haemophilus influenzae
Classification: TRANSFERASE
Source organism: Haemophilus influenzae Rd KW20
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2018-08-20
Authors: Chuang, Y.C., Lyu, P.C., Hsu, S.T.D.
PDB entry 6ahx: Copper-Sensing Operon Regulator Protein (CsoRGz)
Classification: METAL BINDING PROTEIN
Source organism: Geobacillus zalihae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-21
Authors: Normi, M.Y., Mangavelu, A., Sayangku, A.A., Jonet, M.A., Adam, T.C.L., Ali, M.S.M., Rahman, R.N.Z.R.A., Salleh, A.B.
PDB entry 6ahy: Wnt signaling complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-08-21
Authors: Hirai, H., Arimori, T., Matoba, K., Mihara, E., Takagi, J.
PDB entry 6ahz: The NMR Structure of the Polysialyltranseferase Domain (PSTD) in Polysialyltransferase ST8siaIV
Classification: SUGAR BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2018-08-21
Authors: Liu, X.H., Lu, B., Peng, L.X., Liao, S.M., Zhou, F., Chen, D., Lu, Z.L., Zhou, G.P., Huang, R.B.
PDB entry 6ai0: Structure of the 328-692 fragment of FlhA (orthorhombic form)
Classification: PROTEIN TRANSPORT
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-08-21
Authors: Ogawa, Y., Kinoshita, M., Minamino, T., Imada, K.
PDB entry 6ai1: Structure of the 328-692 fragment of FlhA (D456V)
Classification: PROTEIN TRANSPORT
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-08-21
Authors: Ogawa, Y., Kinoshita, M., Minamino, T., Imada, K.
PDB entry 6ai2: Structure of the 328-692 fragment of FlhA (F459A)
Classification: PROTEIN TRANSPORT
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2018-08-21
Authors: Ogawa, Y., Kinoshita, M., Minamino, T., Imada, K.
PDB entry 6ai3: Structure of the 328-692 fragment of FlhA (T490M)
Classification: PROTEIN TRANSPORT
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2018-08-21
Authors: Ogawa, Y., Kinoshita, M., Minamino, T., Imada, K.
PDB entry 6ai4: Structure of Transferase mutant-C21S,C199S
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-08-21
Authors: Park, J.B., Yoo, Y., Kim, J.
PDB entry 6ai5: Disulfide-free, Zn-directed tetramer of the engineered cyt cb562 variant, C96T/A104AB3
Classification: ELECTRON TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2018-08-21
Authors: Song, W.J., Tezcan, F.A.
PDB entry 6ai6: Crystal structure of SpCas9-NG
Classification: HYDROLASE/RNA/DNA
Source organism: Streptococcus pyogenes serotype M1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-08-21
Authors: Nishimasu, H., Hirano, S., Ishitani, R., Nureki, O.
PDB entry 6ai7: Mandelate oxidase mutant-Y128F with the C4a-OH-FMN adduct
Classification: FLAVOPROTEIN
Source organism: Amycolatopsis orientalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2018-08-21
Authors: Li, T.L., Lin, K.H.
PDB entry 6ai8: Cab2 mutant-H337A
Classification: LIGASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-08-22
Authors: Zheng, P., Zhu, Z.
PDB entry 6ai9: Cab2 mutant-H337A complex with phosphopantothenate
Classification: LIGASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2018-08-22
Authors: Zheng, P., Zhu, Z.
PDB entry 6aib: Crystal structures of the N-terminal RecA-like domain 1 of Staphylococcus aureus DEAD-box Cold shock RNA helicase CshA
Classification: STRUCTURAL PROTEIN
Source organism: Staphylococcus aureus subsp. aureus MRSA252
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-08-22
Authors: Chengliang, W., Tian, T., Xiaobao, C., Xuan, Z., Jianye, Z.
PDB entry 6aic: Crystal structures of the N-terminal domain of Staphylococcus aureus DEAD-box Cold shock RNA helicase CshA in complex with AMP
Classification: STRUCTURAL PROTEIN
Source organism: Staphylococcus aureus subsp. aureus MRSA252
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-22
Authors: Tian, T., Chengliang, W., Xiaobao, C., Xuan, Z., Jianye, Z.
PDB entry 6aid: Structural insights into the unique polylactate degrading mechanism of Thermobifida alba cutinase
Classification: HYDROLASE
Source organism: Thermobifida alba
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2018-08-22
Authors: Kitadokoro, K., Kakara, M., Matsui, S., Osokoshi, R., Thumarat, U., Kawai, F., Kamitani, S.
PDB entry 6aie: Crystal structure of a new form of RsmD-like RNA methyl transferase from Mycobacterium tuberculosis determined at 1.74 A resolution
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2018-08-22
Authors: Venkataraman, S., Dhankar, A., Sinha, K.M., Manivasakan, P., Iqbal, N., Singh, T.P., Prasad, B.V.L.S.
PDB entry 6aif: Crystal structure of M120A mutant of O-acetylserine sulfhydrylase from Haemophilus influenzae in complex with high affinity inhibitory peptide from serine acetyl transferase of Salmonella typhimurium
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-08-23
Authors: Singh, R.P., Kaushik, A.
PDB entry 6aig: Crystal structure of PCNA1 from Aeropyrum pernix
Classification: REPLICATION
Source organism: Aeropyrum pernix K1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-08-23
Authors: Yamauchi, T., Kikuchi, M., Tsunoda, M.
PDB entry 6aii: Catalytic domain of PdAgaC
Classification: LYASE
Source organism: Persicobacter
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2018-08-23
Authors: Teh, A.H., Fazli, N.H.
PDB entry 6aij: Cyclodextrin glycosyltransferase from Paenibacillus macerans mutant N603D
Classification: SUGAR BINDING PROTEIN
Source organism: Paenibacillus macerans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.096 Å
Deposited: 2018-08-24
Authors: Li, C.M., Ban, X.F., Li, Z.F., Li, Y.L., Cheng, S.D., Zhang, C.Y., Jin, T.C., Gu, Z.B.
PDB entry 6aik: Cab2 mutant H337A complex with phosphopantothenoyl-CMP
Classification: LIGASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-08-24
Authors: Zheng, P., Zhu, Z.
PDB entry 6ail: CRYSTAL STRUCTURE AT 1.3 ANGSTROMS RESOLUTION OF A NOVEL UDG, UdgX, FROM Mycobacterium smegmatis
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.335 Å
Deposited: 2018-08-24
Authors: Ahn, W.C., Aroli, S., Varshney, V., Woo, E.J.
PDB entry 6aim: Cab2 mutant H337A complex with phosphopantothenate-cysteine
Classification: LIGASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2018-08-24
Authors: Zheng, P., Zhu, Z.
PDB entry 6ain: Crystal structure of p-nitrophenol 4-monooxygenase PnpA from Pseudomonas putida DLL-E4
Classification: FLAVOPROTEIN
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2018-08-24
Authors: Chen, Q.Z., Huang, Y., Duan, Y.J., Li, Z.K., Liu, W.D., Cui, Z.L.
PDB entry 6aio: Crystal structure of p-nitrophenol 4-monooxygenase PnpA from Pseudomonas putida DLL-E4
Classification: FLAVOPROTEIN
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2018-08-24
Authors: Chen, Q.Z., Huang, Y., Duan, Y.J., Li, Z.K., Liu, W.D., Cui, Z.L.
PDB entry 6aip: Cab2 mutant-H337A complex with phosphopantothenoylcystine
Classification: LIGASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2018-08-24
Authors: Zheng, P., Zhu, Z.
PDB entry 6aiq: High resolution structure of recombinant high-potential iron-sulfur protein
Classification: METAL BINDING PROTEIN
Source organism: Thermochromatium tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 0.85 Å
Deposited: 2018-08-24
Authors: Hanazono, Y., Takeda, K., Miki, K.
PDB entry 6air: High resolution structure of perdeuterated high-potential iron-sulfur protein
Classification: METAL BINDING PROTEIN
Source organism: Thermochromatium tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 0.85 Å
Deposited: 2018-08-24
Authors: Hanazono, Y., Takeda, K., Miki, K.
PDB entry 6ais: Loop deletion mutant (deleting two residues)
Classification: DE NOVO PROTEIN
Source organism: Borrelia burgdorferi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2018-08-24
Authors: Shiga, S., Makabe, K.
PDB entry 6ait: Crystal structure of E. coli BepA
Classification: HYDROLASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.598 Å
Deposited: 2018-08-24
Authors: Umar, M.S.M., Tanaka, Y., Kamikubo, H., Tsukazaki, T.
PDB entry 6aix: Crystal structure of DXO in complex with adenosine 3', 5' bisphosphate and two magnesium ions
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-08-25
Authors: Chang, J.H., Tong, L.
PDB entry 6aiy: Crystal structure of DXO (E234A mutant) in complex with adenosine 3', 5' bisphosphate and two magnesium ions
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.902 Å
Deposited: 2018-08-25
Authors: Chang, J.H., Tong, L.
PDB entry 6aj0: The structure of Enterovirus D68 mature virion
Classification: VIRUS
Source organism: Enterovirus D68
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2018-08-25
Authors: Zheng, Q.B., Zhu, R., Xu, L.F., He, M.Z., Yan, X.D., Cheng, T., Li, S.W.
PDB entry 6aj2: The structure of ICAM-5 triggered Enterovirus D68 virus A-particle
Classification: VIRUS
Source organism: Enterovirus D68
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2018-08-26
Authors: Zheng, Q.B., Zhu, R., Xu, L.F., He, M.Z., Yan, X.D., Cheng, T., Li, S.W.
PDB entry 6aj3: The structure of Enterovirus D68 procapsid
Classification: VIRUS
Source organism: Enterovirus D68
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2018-08-26
Authors: Zheng, Q.B., Zhu, R., Xu, L.F., He, M.Z., Yan, X.D., Cheng, T., Li, S.W.
PDB entry 6aj4: Crystal structure of the DHR-2 domain of DOCK7 in complex with Cdc42
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.256 Å
Deposited: 2018-08-27
Authors: Kukimoto-Niino, M., Shirouzu, M.
PDB entry 6aj5: Crystal structure of ligand-free type DHODH from Eimeria tenella
Classification: MEMBRANE PROTEIN
Source organism: Eimeria tenella
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-08-27
Authors: Shiba, T., Inaoka, D.K., Sato, D., Hartuti, E.D., Amalia, E., Nagahama, M., Yoshioka, Y., Matsubayashi, M., Balogun, E.O., Tsuji, N., Kita, K., Harada, S.
PDB entry 6aj6: Crystal structure of Trypanosoma brucei glycosomal isocitrate dehydrogenase in complex with NADP+
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-08-27
Authors: Wang, X., Inaoka, D.K., Shiba, T., Balogun, E.O., Ziebart, N., Allman, S., Watanabe, Y., Nozaki, T., Boshart, M., Bringaud, F., Harada, S., Kita, K.
PDB entry 6aj7: The structure of Enterovirus D68 mature virion in complex with Fab 15C5
Classification: VIRUS
Source organism: Enterovirus D68; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2018-08-27
Authors: Zheng, Q.B., Zhu, R., Xu, L.F., He, M.Z., Yan, X.D., Cheng, T., Li, S.W.
PDB entry 6aj8: Crystal structure of Trypanosoma brucei glycosomal isocitrate dehydrogenase in complex with NADP+, alpha-ketoglutarate and ca2+
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-08-27
Authors: Wang, X., Inaoka, D.K., Shiba, T., Balogun, E.O., Ziebart, N., Allman, S., Watanabe, Y., Nozaki, T., Boshart, M., Bringaud, F., Harada, S., Kita, K.
PDB entry 6aj9: The structure of Enterovirus D68 mature virion in complex with Fab 15C5 and 11G1
Classification: VIRUS
Source organism: Enterovirus D68; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2018-08-27
Authors: Zheng, Q.B., Zhu, R., Xu, L.F., He, M.Z., Yan, X.D., Cheng, T., Li, S.W.
PDB entry 6aja: Crystal structure of Trypanosoma brucei glycosomal isocitrate dehydrogenase in complex with NADPH, alpha-ketoglutarate and ca2+
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2018-08-27
Authors: Wang, X., Inaoka, D.K., Shiba, T., Balogun, E.O., Ziebart, N., Allman, S., Watanabe, Y., Nozaki, T., Boshart, M., Bringaud, F., Harada, S., Kita, K.
PDB entry 6ajb: Crystal structure of Trypanosoma brucei glycosomal isocitrate dehydrogenase in complex with NADH, alpha-ketoglutarate and ca2+
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-08-27
Authors: Wang, X., Inaoka, D.K., Shiba, T., Balogun, E.O., Ziebart, N., Allman, S., Watanabe, Y., Nozaki, T., Boshart, M., Bringaud, F., Harada, S., Kita, K.
PDB entry 6ajc: Crystal structure of Trypanosoma cruzi cytosolic isocitrate dehydrogenase in complex with NADP+, isocitrate and ca2+
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-08-27
Authors: Wang, X., Inaoka, D.K., Shiba, T., Balogun, E.O., Ziebart, N., Allman, S., Watanabe, Y., Nozaki, T., Boshart, M., Bringaud, F., Harada, S., Kita, K.
PDB entry 6ajd: Crystal structure of a monometallic dihydropyrimidinase from Pseudomonas aeruginosa PAO1 reveals no lysine carbamylation within the active site
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.223 Å
Deposited: 2018-08-27
Authors: Huang, Y.H., Huang, C.Y.
PDB entry 6aje: Crystal structure of DHODH in complex with ferulenol from Eimeria tenella
Classification: MEMBRANE PROTEIN
Source organism: Eimeria tenella
Experimental method: X-RAY DIFFRACTION
Resolution: 3.65 Å
Deposited: 2018-08-27
Authors: Shiba, T., Inaoka, D.K., Sato, D., Hartuti, E.D., Amalia, E., Nagahama, M., Yoshioka, Y., Matsubayashi, M., Balogun, E.O., Tsuji, N., Kita, K., Harada, S.
PDB entry 6ajf: Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis
Classification: MEMBRANE PROTEIN, HYDROLASE
Source organism: Enterobacteria phage T4; Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.698 Å
Deposited: 2018-08-27
Authors: Zhang, B., Li, J., Yang, X.L., Wu, L.J., Yang, H.T., Rao, Z.H.
PDB entry 6ajg: Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis complexed with SQ109
Classification: MEMBRANE PROTEIN, HYDROLASE
Source organism: Enterobacteria phage T4; Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.604 Å
Deposited: 2018-08-27
Authors: Zhang, B., Li, J., Yang, X.L., Wu, L.J., Yang, H.T., Rao, Z.H.
PDB entry 6ajh: Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis complexed with AU1235
Classification: MEMBRANE PROTEIN, HYDROLASE
Source organism: Enterobacteria phage T4; Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.818 Å
Deposited: 2018-08-27
Authors: Zhang, B., Li, J., Yang, X.L., Wu, L.J., Yang, H.T., Rao, Z.H.
PDB entry 6aji: Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis complexed with Rimonabant
Classification: MEMBRANE PROTEIN, HYDROLASE
Source organism: Enterobacteria phage T4; Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-08-27
Authors: Zhang, B., Li, J., Yang, X.L., Wu, L.J., Yang, H.T., Rao, Z.H.
PDB entry 6ajj: Crystal structure of mycolic acid transporter MmpL3 from Mycobacterium smegmatis complexed with ICA38
Classification: MEMBRANE PROTEIN, HYDROLASE
Source organism: Enterobacteria phage T4; Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.794 Å
Deposited: 2018-08-27
Authors: Zhang, B., Li, J., Yang, X.L., Wu, L.J., Yang, H.T., Rao, Z.H.
PDB entry 6ajk: Crystal structure of TFB1M and h45 in homo sapiens
Classification: TRANSFERASE/RNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.001 Å
Deposited: 2018-08-28
Authors: Liu, X., Shen, S., Wu, P., Li, F., Wang, C., Gong, Q., Wu, J., Zhang, H., Shi, Y.
PDB entry 6ajl: DOCK7 mutant I1836Y complexed with Cdc42
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.23 Å
Deposited: 2018-08-28
Authors: Kukimoto-Niino, M., Shirouzu, M.
PDB entry 6ajm: Crystal structure of apo AtaTR
Classification: TOXIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.604 Å
Deposited: 2018-08-28
Authors: Yashiro, Y., Yamashita, S., Tomita, K.
PDB entry 6ajn: Crystal structure of AtaTR bound with AcCoA
Classification: TOXIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.302 Å
Deposited: 2018-08-28
Authors: Yashiro, Y., Yamashita, S., Tomita, K.
PDB entry 6ajo: Complex form of Uracil DNA glycosylase X and uracil-DNA.
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis MC2 155; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.269 Å
Deposited: 2018-08-28
Authors: Ahn, W.C., Aroli, S., Varshney, U., Woo, E.J.
PDB entry 6ajp: Complex form of Uracil DNA glycosylase X and deoxyuridine monophosphate.
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.334 Å
Deposited: 2018-08-28
Authors: Ahn, W.C., Aroli, S., Varshney, U., Woo, E.J.
PDB entry 6ajq: E52Q mutant form of Uracil DNA glycosylase X from Mycobacterium smegmatis.
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.342 Å
Deposited: 2018-08-28
Authors: Ahn, W.C., Aroli, S., Varshney, U., Woo, E.J.
PDB entry 6ajr: Complex form of Uracil DNA glycosylase X and uracil
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.341 Å
Deposited: 2018-08-28
Authors: Ahn, W.C., Aroli, S., Varshney, U., Woo, E.J.
PDB entry 6ajs: H109S mutant form of Uracil DNA glycosylase X.
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.632 Å
Deposited: 2018-08-28
Authors: Ahn, W.C., Aroli, S., Varshney, U., Woo, E.J.
PDB entry 6aju: Rat Xanthine oxidoreductase
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2018-08-28
Authors: Okamoto, K., Kawaguchi, Y.
PDB entry 6ajv: Crystal structure of BRD4 in complex with isoliquiritigenin and DMSO (Cocktail No. 3)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2018-08-28
Authors: Yokoyama, T., Matsumoto, K., Nabeshima, Y., Mizuguchi, M.
PDB entry 6ajw: Crystal structure of BRD4 in complex with DMSO (Cocktail No. 4)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.401 Å
Deposited: 2018-08-28
Authors: Yokoyama, T., Matsumoto, K., Nabeshima, Y., Mizuguchi, M.
PDB entry 6ajx: Crystal structure of BRD4 in complex with isoliquiritigenin in the absence of DMSO
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.887 Å
Deposited: 2018-08-28
Authors: Yokoyama, T., Matsumoto, K., Nabeshima, Y., Mizuguchi, M.
PDB entry 6ajy: Crystal structure of BRD4 in complex with 2',4'-dihydroxy-2-methoxychalcone
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-08-28
Authors: Yokoyama, T., Matsumoto, K., Nabeshima, Y., Mizuguchi, M.
PDB entry 6ajz: Joint nentron and X-ray structure of BRD4 in complex with colchicin
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2018-08-28
Authors: Yokoyama, T., Ostermann, A., Schrader, T.E., Nabeshima, Y., Mizuguchi, M.
PDB entry 6ak0: Solution NMR structure of a new lasso peptide specialicin
Classification: UNKNOWN FUNCTION
Source organism: Streptomyces specialis
Experimental method: SOLUTION NMR
Deposited: 2018-08-28
Authors: Hemmi, H., Kodani, S., Kaweewan, I., Komaki, H.
PDB entry 6ak1: Crystal structure of DmoA from Hyphomicrobium sulfonivorans
Classification: OXIDOREDUCTASE
Source organism: Hyphomicrobium sulfonivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.284 Å
Deposited: 2018-08-28
Authors: Cao, H.Y., Wang, P., Peng, M., Li, C.Y.
PDB entry 6ak2: Crystal structure of the syntenin PDZ1 domain in complex with the peptide inhibitor KSL-128018
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.868 Å
Deposited: 2018-08-29
Authors: Jin, Z.Y., Park, J.H., Yun, J.H., Haugaard-Kedstrom, L.M., Lee, W.T.
PDB entry 6ak3: Crystal structure of the human prostaglandin E receptor EP3 bound to prostaglandin E2
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-08-29
Authors: Morimoto, K., Suno, R., Iwata, S., Kobayashi, T.
PDB entry 6ak4: Crystal structure of human FTO in complex with small-molecule inhibitors
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-08-30
Authors: Wang, Y., Cao, R., Peng, S., Zhang, W., Huang, N.
PDB entry 6ak5: Binary Complex of Human DNA Polymerase Mu with MnGTP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-08-30
Authors: Chang, Y.K., Wu, W.J., Tsai, M.D.
PDB entry 6ak6: Binary Complex of Human DNA Polymerase Mu with MnCTP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-08-30
Authors: Chang, Y.K., Wu, W.J., Tsai, M.D.
PDB entry 6ak7: Crystal structure of PPM1K-N94K
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.605 Å
Deposited: 2018-08-30
Authors: Meisam, R.D., Guo, L.L., Xiao, P.
PDB entry 6ak8: Pre-catalytic Ternary Complex of Human DNA Polymerase Mu with Templating Adenine and Incoming Ca-8oxodGTP
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2018-08-30
Authors: Chang, Y.K., Wu, W.J., Tsai, M.D.
PDB entry 6ak9: Pre-catalytic Ternary Complex of Human DNA Polymerase Mu with Templating Cytosine and Incoming Ca-8oxodGTP
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2018-08-30
Authors: Chang, Y.K., Wu, W.J., Tsai, M.D.
PDB entry 6akd: Crystal structure of IdnL7
Classification: LIGASE
Source organism: Streptomyces sp. ML694-90F3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-08-31
Authors: Cieslak, J., Miyanaga, A., Kudo, F., Eguchi, T.
PDB entry 6ake: Crystal structure of mouse claudin-3 in complex with C-terminal fragment of Clostridium perfringens enterotoxin
Classification: MEMBRANE PROTEIN/TOXIN
Source organism: Clostridium perfringens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2018-08-31
Authors: Nakamura, S., Irie, K., Fujiyoshi, Y.
PDB entry 6akf: Crystal structure of mouse claudin-3 P134A mutant in complex with C-terminal fragment of Clostridium perfringens enterotoxin
Classification: MEMBRANE PROTEIN/TOXIN
Source organism: Clostridium perfringens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2018-08-31
Authors: Nakamura, S., Irie, K., Fujiyoshi, Y.
PDB entry 6akg: Crystal structure of mouse claudin-3 P134G mutant in complex with C-terminal fragment of Clostridium perfringens enterotoxin
Classification: MEMBRANE PROTEIN/TOXIN
Source organism: Clostridium perfringens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.3 Å
Deposited: 2018-08-31
Authors: Nakamura, S., Irie, K., Fujiyoshi, Y.
PDB entry 6akh: Pre-catalytic Ternary Complex of Human DNA Polymerase Mu with Templating Adenine and Incoming Mn-dUMPNPP
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-08-31
Authors: Chang, Y.K., Wu, W.J., Tsai, M.D.
PDB entry 6aki: Calcium release-activated calcium channel protein 1, P288L mutant
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 4.496 Å
Deposited: 2018-09-01
Authors: Liu, X., Wu, G., Yang, X., Shen, Y.
PDB entry 6akj: The crystal structure of EMC complex
Classification: RNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe 972h-
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-09-01
Authors: Li, F.
PDB entry 6akk: Crystal structure of the second Coiled-coil domain of SIKE1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-09-02
Authors: Zhou, L., Chen, M., Zhou, Z.C.
PDB entry 6akl: Crystal structure of Striatin3 in complex with SIKE1 Coiled-coil domain
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-09-02
Authors: Zhou, L., Chen, M., Zhou, Z.C.
PDB entry 6akm: Crystal structure of SLMAP-SIKE1 complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-09-02
Authors: Ma, J., Chen, M., Zhou, Z.C.
PDB entry 6akn: X-ray Crystal Structure of Pseudoazurin Met16Leu Variant
Classification: ELECTRON TRANSPORT
Source organism: Achromobacter cycloclastes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2018-09-03
Authors: Sakai, C., Yamaguchi, T., Kohzuma, T.
PDB entry 6ako: Crystal Structure of FOXC2 DBD Bound to DBE2 DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.396 Å
Deposited: 2018-09-03
Authors: Chen, X., Wei, H., Li, J., Liang, X., Dai, S., Jiang, L., Guo, M., Chen, Y.
PDB entry 6akp: Crystal Structural of FOXC2 DNA binding domain bound to PC promoter
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.323 Å
Deposited: 2018-09-03
Authors: Chen, X., Wei, H., Li, J., Liang, X., Dai, S., Jiang, L., Guo, M., Chen, Y.
PDB entry 6akq: The PDZ tandem fragment of A. aeolicus S2P homolog with the PA12 tag inserted between the residues 263 and 267
Classification: SIGNALING PROTEIN
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-09-03
Authors: Tamura, R., Oi, R., Kaneko, M.K., Kato, Y., Nogi, T.
PDB entry 6akr: Crystal structure of the PDE4D catalytic domain in complex with osthole
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.326 Å
Deposited: 2018-09-03
Authors: Wang, S., Huo, Y.W., Xie, Y.
PDB entry 6aks: Cryo-EM structure of CVA10 mature virus
Classification: VIRUS
Source organism: Coxsackievirus A10
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2018-09-03
Authors: Zhu, L., Sun, Y., Fan, J.Y., Zhu, B., Cao, L., Gao, Q., Zhang, Y.J., Liu, H.R., Rao, Z.H., Wang, X.X.
PDB entry 6akt: Cryo-EM structure of CVA10 A-particle
Classification: VIRUS
Source organism: Coxsackievirus A10
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2018-09-03
Authors: Zhu, L., Sun, Y., Fan, J.Y., Zhu, B., Cao, L., Gao, Q., Zhang, Y.J., Liu, H.R., Rao, Z.H., Wang, X.X.
PDB entry 6aku: Cryo-EM structure of CVA10 empty particle
Classification: VIRUS
Source organism: Coxsackievirus A10
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2018-09-03
Authors: Zhu, L., Sun, Y., Fan, J.Y., Zhu, B., Cao, L., Gao, Q., Zhang, Y.J., Liu, H.R., Rao, Z.H., Wang, X.X.
PDB entry 6akv: Crystal structure of LysB4, the endolysin from Bacillus cereus-targeting bacteriophage B4
Classification: HYDROLASE
Source organism: Bacillus phage B4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-09-03
Authors: Hong, S., Ha, N.-C.
PDB entry 6akw: Crystal structure of RNA dioxygenase bound with an inhibitor
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-09-04
Authors: Yang, C.-G., Huang, Y., Gan, J.
PDB entry 6akx: The Crystal structure of Human Chemokine Receptor CCR5 in complex with compound 21
Classification: SIGNALING PROTEIN
Source organism: Clostridium pasteurianum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-09-04
Authors: Zhu, Y., Zhao, Q., Wu, B.
PDB entry 6aky: The Crystal structure of Human Chemokine Receptor CCR5 in complex with compound 34
Classification: SIGNALING PROTEIN
Source organism: Clostridium pasteurianum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-09-04
Authors: Zhu, Y., Zhao, Q., Wu, B.
PDB entry 6akz: Crystal structure of GlcNAc Inducible Gene 2, GIG2 (DUF1479) from Candida albicans
Classification: OXIDOREDUCTASE
Source organism: Candida albicans (strain SC5314 / ATCC MYA-2876)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2018-09-05
Authors: Gautam, G., Rani, P., Dutta, A., Gourinath, S.
PDB entry 6al0: The NZ-1 Fab complexed with the PDZ tandem fragment of A. aeolicus S2P homolog with the PA12 tag inserted between the residues 263 and 267
Classification: SIGNALING PROTEIN
Source organism: Aquifex aeolicus; Aquifex aeolicus (strain VF5); Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-09-05
Authors: Tamura, R., Oi, R., Kaneko, M.K., Kato, Y., Nogi, T.
PDB entry 6al1: The NZ-1 Fab complexed with the PDZ tandem fragment of A. aeolicus S2P homolog with the PA12 tag inserted between the residues 181 and 184
Classification: SIGNALING PROTEIN
Source organism: Aquifex aeolicus VF5; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-09-05
Authors: Tamura, R., Oi, R., Kaneko, M.K., Kato, Y., Nogi, T.
PDB entry 6al2: Crystal structure of E. coli YidC at 2.8 A resolution
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-09-05
Authors: Tanaka, Y., Tsukazaki, T., Izumioka, A., Hamid, A.A., Fujii, A.
PDB entry 6al3: Lys49 PLA2 BPII derived from the venom of Protobothrops flavoviridis.
Classification: TOXIN
Source organism: Protobothrops flavoviridis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2018-09-05
Authors: Matsui, T., Kamata, S., Suzuki, A., Oda-Ueda, N., Ogawa, T., Tanaka, Y.
PDB entry 6al4: CRYSTAL STRUCTURE OF ANTI-CD19 ANTIBODY B43 FAB
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2017-08-07
Authors: Teplyakov, A., Obmolova, G., Gilliland, G.L.
PDB entry 6al5: COMPLEX BETWEEN CD19 (N138Q MUTANT) AND B43 FAB
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2017-08-07
Authors: Teplyakov, A., Obmolova, G., Gilliland, G.L.
PDB entry 6al6: Crystal structure HpiC1 in P42 space group
Classification: ISOMERASE
Source organism: Fischerella sp. ATCC 43239
Experimental method: X-RAY DIFFRACTION
Resolution: 2.088 Å
Deposited: 2017-08-07
Authors: Newmister, S.A., Li, S., Garcia-Borras, M., Sanders, J.N., Yang, S., Lowell, A.N., Yu, F., Smith, J.L., Williams, R.M., Houk, K.N., Sherman, D.H.
PDB entry 6al7: Crystal structure HpiC1 F138S
Classification: ISOMERASE
Source organism: Fischerella sp. ATCC 43239
Experimental method: X-RAY DIFFRACTION
Resolution: 1.687 Å
Deposited: 2017-08-07
Authors: Newmister, S.A., Li, S., Garcia-Borras, M., Sanders, J.N., Yang, S., Lowell, A.N., Yu, F., Smith, J.L., Williams, R.M., Houk, K.N., Sherman, D.H.
PDB entry 6al8: Crystal structure HpiC1 Y101F/F138S
Classification: ISOMERASE
Source organism: Fischerella sp. ATCC 43239
Experimental method: X-RAY DIFFRACTION
Resolution: 1.641 Å
Deposited: 2017-08-07
Authors: Newmister, S.A., Li, S., Garcia-Borras, M., Sanders, J.N., Yang, S., Lowell, A.N., Yu, F., Smith, J.L., Williams, R.M., Houk, K.N., Sherman, D.H.
PDB entry 6al9: Crystal structure of chorismate mutase from Helicobacter pylori in complex with prephenate
Classification: ISOMERASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-08-07
Authors: Fan, Y., Jameson, G.B., Panjikar, S., Parker, E.J.
PDB entry 6ala: Crystal structure of H108A peptidylglycine alpha-hydroxylating monooxygenase (PHM) in complex with citrate
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2017-08-07
Authors: Maheshwari, S., Rudzka, K., Gabelli, S.B., Amzel, L.M.
PDB entry 6alb: CREBBP bromodomain in complex with Cpd 30 (1-(3-(3-(1-methyl-1H-pyrazol-4-yl)isoquinolin-8-yl)-1-(tetrahydro-2H-pyran-4-yl)-1,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridin-5-yl)ethan-1-one)
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.053 Å
Deposited: 2017-08-07
Authors: Murray, J.M.