LiteFold/PDB huggingface dataset:
PDB entry 6vdh: Crystal structure of ancestral apicomplexan lactate dehydrogenase in alternate dimer configuration with sulfate.
Classification: OXIDOREDUCTASE
Source organism: Apicomplexa sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-12-27
Authors: Theobald, D.L., Wirth, J.D., Classen, S., Perlmutter, N.
PDB entry 6vdi: Crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate.
Classification: OXIDOREDUCTASE
Source organism: Apicomplexa sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-12-27
Authors: Theobald, D.L., Wirth, J.D., Classen, S., Perlmutter, N.
PDB entry 6vdj: Crystal structure of ancestral apicomplexan lactate dehydrogenase with sulfate and NADH4.
Classification: OXIDOREDUCTASE
Source organism: Apicomplexa sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-12-27
Authors: Theobald, D.L., Wirth, J.D., Classen, S., Perlmutter, N.
PDB entry 6vdk: CryoEM structure of HIV-1 conserved Intasome Core
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2019-12-27
Authors: Li, M., Chen, X., Craigie, R.
PDB entry 6vdl: HCV NS3/4A protease A156T mutant in complex with glecaprevir
Classification: VIRAL PROTEIN
Source organism: Hepatitis C virus genotype 1a (isolate 1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-12-27
Authors: Timm, J., Schiffer, C.A.
PDB entry 6vdm: HCV NS3/4A protease A156T, D168E double mutant in complex with glecaprevir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 1a (isolate 1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-12-27
Authors: Timm, J., Schiffer, C.A.
PDB entry 6vdn: HCV NS3/4A protease A156T mutant
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 1a (isolate 1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-12-27
Authors: Timm, J., Schiffer, C.A.
PDB entry 6vdo: HCV NS3/4A protease A156T, D168E double mutant
Classification: VIRAL PROTEIN
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2019-12-27
Authors: Timm, J., Schiffer, C.A.
PDB entry 6vdp: Crystal structure of SfmD truncated variant
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lavendulae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-12-27
Authors: Shin, I., Liu, A.
PDB entry 6vdq: Crystal structure of SfmD
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lavendulae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2019-12-27
Authors: Shin, I., Liu, A.
PDB entry 6vdr: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate 4-bromophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2019-12-27
Authors: Ghiladi, R.A., de Serrano, V.S., McGuire, A., Malewschik, T.
PDB entry 6vds: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate 4-bromo-ortho-cresol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2019-12-27
Authors: Ghiladi, R.A., de Serrano, V.S., McGuire, A., Malewschik, T.
PDB entry 6vdt: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate 4-nitrophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.978 Å
Deposited: 2019-12-27
Authors: Ghiladi, R.A., de Serrano, V.S., McGuire, A., Malewschik, T.
PDB entry 6vdu: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate Trichlorophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2019-12-27
Authors: Ghiladi, R.A., de Serrano, V.S., McGuire, A., Malewschik, T.
PDB entry 6vdv: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III)- Porphyrin and Substrate 4-bromophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2019-12-27
Authors: Ghiladi, R.A., de Serrano, V.S., McGuire, A., Malewschik, T.
PDB entry 6vdw: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III) Porphyrin and Substrate 4-nitrophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-12-27
Authors: Ghiladi, R.A., de Serrano, V.S., McGuire, A., Malewschik, T.
PDB entry 6vdx: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III)- Porphyrin and Substrate Trichlorophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2019-12-27
Authors: Ghiladi, R.A., de Serrano, V.S., McGuire, A., Malewschik, T.
PDB entry 6vdy: Crystal Structure of Dehaloperoxidase B wild type in Complex with Substrate Trichlorophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-12-27
Authors: Ghiladi, R.A., de Serrano, V.S., McGuire, A., Malewschik, T.
PDB entry 6vdz: Crystal structure of reduced SfmD by soaking with sodium hydrosulfite
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lavendulae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2019-12-27
Authors: Shin, I., Liu, A.
PDB entry 6ve0: Crystal structure of reduced SfmD by soaking with sodium hydrosulfite
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lavendulae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2019-12-27
Authors: Shin, I., Liu, A.
PDB entry 6ve1: Crystal structure of endo-beta-N-acetylglucosaminidase H at high pH
Classification: HYDROLASE, SUGAR BINDING PROTEIN
Source organism: Streptomyces plicatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-12-28
Authors: Stachowski, T.R., Snell, M.E., Snell, E.S.
PDB entry 6ve2: Tetradecameric PilQ bound by TsaP heptamer from Pseudomonas aeruginosa
Classification: PROTEIN TRANSPORT
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2019-12-28
Authors: McCallum, M., Tammam, S., Rubinstein, J.L., Burrows, L.L., Howell, P.L.
PDB entry 6ve3: Tetradecameric PilQ from Pseudomonas aeruginosa
Classification: PROTEIN TRANSPORT
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2019-12-28
Authors: McCallum, M., Tammam, S., Rubinstein, J.L., Burrows, L.L., Howell, P.L.
PDB entry 6ve4: Pentadecameric PilQ from Pseudomonas aeruginosa
Classification: PROTEIN TRANSPORT
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.9 Å
Deposited: 2019-12-28
Authors: McCallum, M., Tammam, S., Rubinstein, J.L., Burrows, L.L., Howell, P.L.
PDB entry 6ve5: X-ray structure of human REV7 in complex with Shieldin3 (residues 41-74)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-12-28
Authors: Cui, G., Botuyan, M.V., Mer, G.
PDB entry 6ve6: A structural characterization of poly(aspartic acid) hydrolase-1 from Sphingomonas sp. KT-1.
Classification: HYDROLASE
Source organism: Sphingomonas sp. KT-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.446 Å
Deposited: 2019-12-28
Authors: Bolay, A.L., Salvo, H., Brambley, C.A., Yared, T.J., Miller, J.M., Wallen, J.R., Weiland, M.H.
PDB entry 6ve7: The inner junction complex of Chlamydomonas reinhardtii doublet microtubule
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2019-12-30
Authors: Khalifa, A.A.Z., Ichikawa, M., Bui, K.H.
PDB entry 6ve8: Structure of the Glutamate-Like Receptor GLR3.2 ligand-binding domain in complex with Methionine
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-12-30
Authors: Gangwar, S.P., Green, M.N., Yoder, J.B., Sobolevsky, A.I.
PDB entry 6ve9: Solution NMR structure of enterococcal cytolysin S (CylLS"") produced by Enterococcus faecalis
Classification: TOXIN
Source organism: Enterococcus faecalis
Experimental method: SOLUTION NMR
Deposited: 2019-12-30
Authors: Bobeica, S.C., van der Donk, W.A., Zhu, L., Tang, W.
PDB entry 6vea: Structure of the Glutamate-Like Receptor GLR3.2 ligand-binding domain in complex with Glycine
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2019-12-30
Authors: Gangwar, S.P., Green, M.N., Yoder, J.B., Sobolevsky, A.I.
PDB entry 6veb: Precorrin-2-bound S128A S. typhimurium siroheme synthase
Classification: TRANSFERASE
Source organism: Salmonella enterica I
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2019-12-31
Authors: Pennington, J.M., Stroupe, M.E.
PDB entry 6vec: Cryo-EM structure of F-actin/Plastin2-ABD2 complex
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-12-31
Authors: Zheng, W., Kudryashov, D.S., Egelman, E.H.
PDB entry 6ved: Solution structure of the TTD and linker region of UHRF1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2019-12-31
Authors: Lemak, A., Houliston, S., Duan, S., Ong, M.S., Arrowsmith, C.H.
PDB entry 6vee: Solution structure of the TTD and linker region of mouse UHRF1 (NP95)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2019-12-31
Authors: Lemak, A., Houliston, S., Duan, S., Arrowsmith, C.H.
PDB entry 6vef: Cryo-EM Structure of Escherichia coli 2-oxoglutarate dehydrogenase E1 component sucA
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.08 Å
Deposited: 2019-12-31
Authors: Gao, H.
PDB entry 6veh: Computationally designed C3-symmetric homotrimer from HEAT repeat protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.303 Å
Deposited: 2020-01-02
Authors: Bick, M.J., Ueda, G., Baker, D.
PDB entry 6vei: Crystal Structure of Human Cytosolic Isocitrate Dehydrogenase (IDH1) R132H Mutant in Complex with NADPH and AG-881 (Vorasidenib) Inhibitor
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-01-02
Authors: Padyana, A., Jin, L.
PDB entry 6vej: TriABC transporter from Pseudomonas aeruginosa
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2020-01-02
Authors: Sygusch, J., Fabre, L., Rouiller, I., Bhattacharyya, S.
PDB entry 6vek: Contact-dependent growth inhibition toxin-immunity protein complex from from E. coli 3006, full-length
Classification: TOXIN
Source organism: Escherichia coli 3006
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-01-02
Authors: Michalska, K., Stols, L., Eschenfeldt, W., Hayes, C.S., Goulding, C.W., Joachimiak, A., Midwest Center for Structural Genomics (MCSG), Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6vel: Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody 66E8Fab
Classification: CELL ADHESION/Immune System
Source organism: Homo sapiens; Mus musculus; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-01-02
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6vem: Structure of RNA octamer
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2020-01-02
Authors: Pallan, P.S., Egli, M.
PDB entry 6ven: Yeast COMPASS in complex with a ubiquitinated nucleosome
Classification: TRANSFERASE/STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; Saccharomyces cerevisiae; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2020-01-02
Authors: Worden, E.J., Wolberger, C.
PDB entry 6veo: ATAD2B bromodomain in complex with 4-({[(3R,4R)-4-{[3-methyl-5-(5-methylpyridin-3-yl)-2-oxo-1,2-dihydro-1,7-naphthyridin-8-yl]amino}piperidin-3-yl]oxy}methyl)-1lambda~6~-thiane-1,1-dione (compound 38)
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-01-02
Authors: Glass, K.C.
PDB entry 6vep: Human insulin in complex with the human insulin microreceptor in turn in complex with Fv 83-7
Classification: HORMONE RECEPTOR/HORMONE/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-01-02
Authors: Lawrence, M.C., Menting, J.G.T.
PDB entry 6veq: Con-Ins G1 in complex with the human insulin microreceptor in turn in complex with Fv 83-7
Classification: TOXIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2020-01-02
Authors: Menting, J.G., Chou, D.H.-C., Lawrence, M.C., Xiong, X.
PDB entry 6ver: Human insulin analog: [GluB10,TyrB20]-DOI
Classification: HORMONE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.047 Å
Deposited: 2020-01-02
Authors: Menting, J.G., Chou, D.H.-C., Lawrence, M.C., Xiong, X.
PDB entry 6ves: Human insulin analog: [GluB10,HisA8,ArgA9]-DOI
Classification: HORMONE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-01-02
Authors: Menting, J.G., Chou, D.H.-C., Lawrence, M.C., Xiong, X.
PDB entry 6vet: Human insulin analog: [GluB10,HisA8,ArgA9,TyrB20]-DOI
Classification: HORMONE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2020-01-02
Authors: Menting, J.G., Chou, D.H.-C., Lawrence, M.C., Xiong, X.
PDB entry 6vez: DNA Polymerase Mu, 8-oxorGTP:At Pre-Catalytic Ternary Complex, 20 mM Ca2+ (60 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.875 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf0: DNA Polymerase Mu, 8-oxorGTP:At Reaction State Ternary Complex, 50 mM Mg2+ (30 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf1: DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mg2+ (120 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf2: DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mg2+ (960 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf3: DNA Polymerase Mu, 8-oxorGTP:At Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.521 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf4: DNA Polymerase Mu, 8-oxorGTP:At Reaction State Ternary Complex, 50 mM Mn2+ (30 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf5: DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mn2+ (120 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf6: DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mn2+ (960 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf7: DNA Polymerase Mu, 8-oxodGTP:At Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.871 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf8: DNA Polymerase Mu, 8-oxorGTP:Ct Pre-Catalytic Ternary Complex, 20 mM Ca2+ (120 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vf9: DNA Polymerase Mu, 8-oxorGTP:Ct Ternary Complex, 50 mM Mg2+ (2160 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vfa: DNA Polymerase Mu, 8-oxorGTP:Ct Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vfb: DNA Polymerase Mu, 8-oxorGTP:Ct Reaction State Ternary Complex, 50 mM Mn2+ (960 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vfc: DNA Polymerase Mu, 8-oxorGTP:Ct Product State Ternary Complex, 50 mM Mn2+ (2160 min)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2020-01-03
Authors: Jamsen, J.A., Wilson, S.H.
PDB entry 6vfd: Tryptophan synthase mutant Q114A in complex with cesium ion at the metal coordination site and 2-aminophenol quinonoid at the enzyme beta site
Classification: LYASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-01-03
Authors: Hilario, E., Fan, L., Dunn, M.F., Mueller, L.J.
PDB entry 6vfe: Gasdermin D pore
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-01-03
Authors: Xia, S., Ruan, J., Wu, H.
PDB entry 6vff: Dimer of Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from human GLI1 gene
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-01-03
Authors: Thuy-boun, A.S., Fisher, A.J., Beal, P.A.
PDB entry 6vfh: De novo designed tetrahedral nanoparticle T33_dn10
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2020-01-05
Authors: Antanasijevic, A., Ward, A.B.
PDB entry 6vfi: De novo designed octahedral nanoparticle O43_dn18
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.54 Å
Deposited: 2020-01-05
Authors: Antanasijevic, A., Ward, A.B.
PDB entry 6vfj: De novo designed icosahedral nanoparticle I53_dn5
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.35 Å
Deposited: 2020-01-05
Authors: Antanasijevic, A., Ward, A.B.
PDB entry 6vfk: De novo designed tetrahedral nanoparticle T33_dn10 displaying 4 copies of BG505-SOSIP trimer on the surface
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.25 Å
Deposited: 2020-01-05
Authors: Antanasijevic, A., Ward, A.B.
PDB entry 6vfl: BG505-SOSIP model reconstructed by subparticle extraction and refinement from a tetrahedral nanoparticle T33_dn10
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.14 Å
Deposited: 2020-01-05
Authors: Antanasijevic, A., Ward, A.B.
PDB entry 6vfm: Crystal structure of SpeG allosteric polyamine acetyltransferase from Bacillus thuringiensis
Classification: TRANSFERASE
Source organism: Bacillus thuringiensis subsp. finitimus (strain YBT-020)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2020-01-05
Authors: Tsimbalyuk, S., Shornikov, A., Le, V.T.B., Kuhn, M.L., Forwood, J.K.
PDB entry 6vfn: Crystal structure of SpeG allosteric polyamine acetyltransferase from Bacillus thuringiensis in complex with spermine
Classification: TRANSFERASE
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-01-05
Authors: Tsimbalyuk, S., Shornikov, A., Le, V.T.B., Kuhn, M.L., Forwood, J.K.
PDB entry 6vfo: Solution structure of the PHD of mouse UHRF1 (NP95)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2020-01-06
Authors: Lemak, A., Houliston, S., Duan, S., Arrowsmith, C.H.
PDB entry 6vfp: Crystal structure of human protocadherin 1 EC1-EC4
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-01-06
Authors: Brasch, J., Harrison, O.J., Shapiro, L.
PDB entry 6vfq: Crystal structure of monomeric human protocadherin 10 EC1-EC4
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-01-06
Authors: Harrison, O.J., Brasch, J., Shapiro, L.
PDB entry 6vfr: Crystal structure of human protocadherin 18 EC1-EC4
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2020-01-06
Authors: Harrison, O.J., Brasch, J., Shapiro, L.
PDB entry 6vfs: ClpXP from Neisseria meningitidis - Conformation A
Classification: HYDROLASE
Source organism: Escherichia coli BL21(DE3); Neisseria meningitidis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-01-06
Authors: Ripstein, Z.A., Vahidi, S., Houry, W.A., Rubinstein, J.L., Kay, L.E.
PDB entry 6vft: Crystal structure of human delta protocadherin 17 EC1-EC4
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.71 Å
Deposited: 2020-01-06
Authors: Harrison, O.J., Brasch, J., Shapiro, L.
PDB entry 6vfu: Crystal structure of human protocadherin 19 EC1-EC4
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2020-01-06
Authors: Harrison, O.J., Brasch, J., Shapiro, L.
PDB entry 6vfv: Crystal structure of human protocadherin 8 EC5-EC6
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-01-06
Authors: Harrison, O.J., Brasch, J., Shapiro, L.
PDB entry 6vfw: Crystal structure of human delta protocadherin 10 EC1-EC4
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2020-01-06
Authors: Harrison, O.J., Brasch, J., Shapiro, L.
PDB entry 6vfx: ClpXP from Neisseria meningitidis - Conformation B
Classification: HYDROLASE
Source organism: Escherichia coli BL21(DE3); Neisseria meningitidis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-01-06
Authors: Ripstein, Z.A., Vahidi, S., Houry, W.A., Rubinstein, J.L., Kay, L.E.
PDB entry 6vfy: Crystal structure of mouse acyl-CoA thioesterase 7 with CoA
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-01-06
Authors: Teakel, S.L., Forwood, J.K.
PDB entry 6vfz: Crystal Structure of Human Mitochondrial Isocitrate Dehydrogenase (IDH2) R140Q Mutant Homodimer in Complex with NADPH and AG-881 (Vorasidenib) Inhibitor.
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2020-01-07
Authors: Padyana, A., Jin, L.
PDB entry 6vg0: CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC ISOCITRATE DEHYDROGENASE (IDH1) R132H MUTANT IN COMPLEX WITH NADPH and AGI-15056
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2020-01-07
Authors: Padyana, A., Jin, L.
PDB entry 6vg1: xenopus protocadherin 8.1 EC1-6
Classification: CELL ADHESION
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-01-07
Authors: Harrison, O.J., Brasch, B., Shapiro, L.S.
PDB entry 6vg2: Crystal structure of the DNA binding domain of human transcription factor FLI1 in complex with 16-mer DNA CAGAGGATGTGGCTTC
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2020-01-07
Authors: Hou, C., Tsodikov, O.V.
PDB entry 6vg3: Structure of unliganded, inactive PTK7 kinase domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-01-07
Authors: Malhotra, K., Stayrook, S.E., Sheetz, J., Lemmon, M.A.
PDB entry 6vg4: Human protocadherin 10 ectodomain
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.298 Å
Deposited: 2020-01-07
Authors: Harrison, O.J., Brasch, J., Shapiro, L.
PDB entry 6vg5: DengueV-2 Capsid ST148 inhibitor Complex
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Dengue virus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-01-07
Authors: White, M., Xia, H., Shi, P.
PDB entry 6vg6: Crystal structure of DPO4 with 8-oxoadenine (oxoA) and dGTP*
Classification: TRANSFERASE/DNA
Source organism: Saccharolobus solfataricus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2020-01-07
Authors: Jung, H., Lee, S.
PDB entry 6vg7: De novo designed Rossmann fold protein ROS2_49223
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2020-01-07
Authors: Pan, X., Zhang, Y., Kelly, M., Kortemme, T.
PDB entry 6vg8: Crystal structure of the DNA binding domains of human FLI1 and Runx2 in complex with 16-mer DNA CAGAGGATGTGGCTTC
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.31 Å
Deposited: 2020-01-07
Authors: Hou, C., Tsodikov, O.V.
PDB entry 6vg9: The crystal structure of the 2009 H1N1/California PA endonuclease I38T mutant in complex with SJ000986248
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Luxembourg/43/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2020-01-07
Authors: Cuypers, M.G., Slavish, P.J., Rankovic, Z., White, S.W.
PDB entry 6vga: De novo designed Rossmann fold protein ROS2_835
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2020-01-07
Authors: Pan, X., Zhang, Y., Kelly, M., Kortemme, T.
PDB entry 6vgb: De novo designed Rossmann fold protein ROS2_36830
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2020-01-07
Authors: Pan, X., Zhang, Y., Kelly, M., Kortemme, T.
PDB entry 6vgc: Crystal Structures of FLAP bound to DG-031
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2020-01-07
Authors: Ho, J.D., Lee, M.R., Rauch, C.T., Aznavour, K., Park, J.S., Luz, J.G., Antonysamy, S., Condon, B., Maletic, M., Zhang, A., Hickey, M.J., Hughes, N.E., Chandrasekhar, S., Sloan, A.V., Gooding, K., Harvey, A., Yu, X.P., Kahl, S.D., Norman, B.H.
PDB entry 6vgd: Crystal structure of the DNA binding domain (DBD) of human FLI1 and the complex of the DBD of human Runx2 with core binding factor beta (Cbfb), in complex with 16mer DNA CAGAGGATGTGGCTTC
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.2 Å
Deposited: 2020-01-07
Authors: Hou, C., Tsodikov, O.V.
PDB entry 6vge: Crystal structure of the DNA binding domains of human transcription factor ERG, human Runx2 bound to core binding factor beta (Cbfb), in complex with 16mer DNA CAGAGGATGTGGCTTC
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.25 Å
Deposited: 2020-01-07
Authors: Hou, C., Tsodikov, O.V.
PDB entry 6vgf: Peanut lectin complexed with divalent S-beta-D-thiogalactopyranosyl beta-D-glucopyranoside derivative (diSTGD)
Classification: SUGAR BINDING PROTEIN
Source organism: Arachis hypogaea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-01-08
Authors: Otero, L.H., Primo, E.D., Cagnoni, A.J., Cano, M.E., Klinke, S., Goldbaum, F.A., Uhrig, M.L.
PDB entry 6vgg: Crystal structure of the DNA binding domains of human transcription factor ERG, human Runx2 bound to core binding factor beta (Cbfb), and mithramycin, in complex with 16mer DNA CAGAGGATGTGGCTTC
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.31 Å
Deposited: 2020-01-08
Authors: Hou, C., Rohr, J., Tsodikov, O.V.
PDB entry 6vgh: Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant In Complex with Lasofoxifene
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-01-08
Authors: Fanning, S.W., Greene, G.L.
PDB entry 6vgi: Crystal Structures of FLAP bound to MK-866
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2020-01-08
Authors: Ho, J.D., Lee, M.R., Rauch, C.T., Aznavour, K., Park, J.S., Luz, J.G., Antonysamy, S., Condon, B., Maletic, M., Zhang, A., Hickey, M.J., Hughes, N.E., Chandrasekhar, S., Sloan, A.V., Gooding, K., Harvey, A., Yu, X.P., Kahl, S.D., Norman, B.H.
PDB entry 6vgj: N-terminal variant of CXCL13
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2020-01-08
Authors: Rosenberg Jr., E.M., Lolis, E.J.
PDB entry 6vgk: ClpP1P2 complex from M. tuberculosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-01-08
Authors: Ripstein, Z.A., Vahidi, S., Rubinstein, J.L., Kay, L.E.
PDB entry 6vgl: JAK2 JH1 in complex with ruxolitinib
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-01-08
Authors: Davis, R.R., Schonbrunn, E.
PDB entry 6vgm: Crystal structure of DPO4 with 8-oxoadenine (oxoA) and dTTP*
Classification: TRANSFERASE
Source organism: Saccharolobus solfataricus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2020-01-08
Authors: Jung, H., Lee, S.
PDB entry 6vgn: ClpP1P2 complex from M. tuberculosis bound to ADEP
Classification: HYDROLASE/ANTIBIOTIC
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-01-08
Authors: Ripstein, Z.A., Vahidi, S., Rubinstein, J.L., Kay, L.E.
PDB entry 6vgo: Crystal Structure of Human Dipeptidase 3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2020-01-08
Authors: Hayashi, K., Longenecker, K.L., Vivona, S.
PDB entry 6vgq: ClpP1P2 complex from M. tuberculosis with GLF-CMK bound to ClpP1
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-01-08
Authors: Ripstein, Z.A., Vahidi, S., Rubinstein, J.L., Kay, L.E.
PDB entry 6vgr: Crystal Structure of Human Dipeptidase 3 in Complex with Fab of SC-003
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2020-01-08
Authors: Hayashi, K., Longenecker, K.L., Vivona, S.
PDB entry 6vgs: Alpha-ketoisovalerate decarboxylase (KivD) from Lactococcus lactis, thermostable mutant
Classification: LYASE
Source organism: Lactococcus lactis subsp. lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-01-08
Authors: Chan, S., Korman, T.P., Sawaya, M.R., Bowie, J.U.
PDB entry 6vgt: Solution NMR structure of enterococcal cytolysin L (CylLL"") produced by Enterococcus faecalis
Classification: TOXIN
Source organism: Enterococcus faecalis
Experimental method: SOLUTION NMR
Deposited: 2020-01-08
Authors: Bobeica, S.C., van der Donk, W.A., Zhu, L., Tang, W.
PDB entry 6vgu: Crystal structure of FERM-folded talin head domain bound to the NPLY motif of beta3-integrin
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2020-01-09
Authors: Zhang, P., Sun, Y., Wu, J.
PDB entry 6vgv: Crystal structure of VidaL intein
Classification: SPLICING
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-01-09
Authors: Burton, A.J., Haugbro, M., Parisi, E., Muir, T.W.
PDB entry 6vgw: Crystal structure of VidaL intein (selenomethionine variant)
Classification: SPLICING
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2020-01-09
Authors: Burton, A.J., Haugbro, M., Parisi, E., Muir, T.W.
PDB entry 6vgy: 2.05 A resolution structure of MERS 3CL protease in complex with inhibitor 6b
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-01-09
Authors: Lovell, S., Battaile, K.P., Kashipathy, M.M., Rathnayake, A.D., Zheng, J., Kim, Y., Nguyen, H.N., Chang, K.O., Groutas, W.C.
PDB entry 6vgz: 2.25 A resolution structure of MERS 3CL protease in complex with inhibitor 6d
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-01-09
Authors: Lovell, S., Battaile, K.P., Kashipathy, M.M., Rathnayake, A.D., Zheng, J., Kim, Y., Nguyen, H.N., Chang, K.O., Groutas, W.C.
PDB entry 6vh0: 1.95 A resolution structure of MERS 3CL protease in complex with inhibitor 6g
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-01-09
Authors: Lovell, S., Battaile, K.P., Kashipathy, M.M., Rathnayake, A.D., Zheng, J., Kim, Y., Nguyen, H.N., Chang, K.O., Groutas, W.C.
PDB entry 6vh1: 2.30 A resolution structure of MERS 3CL protease in complex with inhibitor 6h
Classification: HYDROLASE
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-01-09
Authors: Lovell, S., Battaile, K.P., Kashipathy, M.M., Rathnayake, A.D., Zheng, J., Kim, Y., Nguyen, H.N., Chang, K.O., Groutas, W.C.
PDB entry 6vh2: 2.26 A resolution structure of MERS 3CL protease in complex with inhibitor 7i
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2020-01-09
Authors: Lovell, S., Battaile, K.P., Kashipathy, M.M., Rathnayake, A.D., Zheng, J., Kim, Y., Nguyen, H.N., Chang, K.O., Groutas, W.C.
PDB entry 6vh3: 2.20 A resolution structure of MERS 3CL protease in complex with inhibitor 7j
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-01-09
Authors: Lovell, S., Battaile, K.P., Kashipathy, M.M., Rathnayake, A.D., Zheng, J., Kim, Y., Nguyen, H.N., Chang, K.O., Groutas, W.C.
PDB entry 6vh4: Wild type EGFR in complex with LN2380
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-01-09
Authors: Heppner, D.E., Eck, M.J.
PDB entry 6vh5: Crystal structure of prephenate dehydratase from brucella melitensis biovar abortus 2308 in complex with phenylalanine
Classification: HYDROLASE
Source organism: Brucella abortus (strain 2308)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-01-09
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6vh6: Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragment
Classification: VIRAL PROTEIN
Source organism: Epstein-Barr virus (strain B95-8)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-01-09
Authors: Messick, T.E., Lieberman, P.M.
PDB entry 6vh7: Doublet Tau Fibril from Corticobasal Degeneration Human Brain Tissue
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-01-09
Authors: Arakhamia, T., Lee, C.E., Carlomagno, Y., Duong, D.M., Kundinger, S.R., Wang, K., Williams, D., DeTure, M., Dickson, D.W., Cook, C.N., Seyfried, N.T., Petrucelli, L., Fitzpatrick, A.W.P.
PDB entry 6vh8: NMR Solution Structure of Excelsatoxin A
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2020-01-09
Authors: Harvey, P.J., Durek, T., Craik, D.J.
PDB entry 6vh9: FphF, Staphylococcus aureus fluorophosphonate-binding serine hydrolases F, apo form
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2020-01-09
Authors: Fellner, M., Jamieson, S.A., Brewster, J.L., Mace, P.D.
PDB entry 6vha: Singlet Tau Fibril from Corticobasal Degeneration Human Brain Tissue
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2020-01-09
Authors: Arakhamia, T., Lee, C.E., Carlomagno, Y., Duong, D.M., Kundinger, S.R., Wang, K., Williams, D., DeTure, M., Dickson, D.W., Cook, C.N., Seyfried, N.T., Petrucelli, L., Fitzpatrick, A.W.P.
PDB entry 6vhb: 1.4A low-dose structure of GSNQNNF determined from initial phases generated using radiation damage
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.4 Å
Deposited: 2020-01-09
Authors: Martynowycz, M.W., Hattne, J., Gonen, T.
PDB entry 6vhc: 1.4A damaged structure of GSNQNNF used to determine initial phases from radiation damage
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.4 Å
Deposited: 2020-01-09
Authors: Martynowycz, M.W., Hattne, J., Gonen, T.
PDB entry 6vhd: FphF, Staphylococcus aureus fluorophosphonate-binding serine hydrolases F, KT129 bound
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-01-09
Authors: Fellner, M., Mace, P.D.
PDB entry 6vhe: FphF, Staphylococcus aureus fluorophosphonate-binding serine hydrolases F, KT130 bound
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2020-01-09
Authors: Fellner, M., Mace, P.D.
PDB entry 6vhf: Crystal structure of RbBP5 interacting domain of Cfp1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.311 Å
Deposited: 2020-01-09
Authors: Joshi, M., Couture, J.F.
PDB entry 6vhg: Crystal structure of phosphorylated RET tyrosine kinase domain complexed with a pyrazolo[1,5-a]pyrimidine inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.303 Å
Deposited: 2020-01-09
Authors: Lee, C.C., Spraggon, G.
PDB entry 6vhh: Human Teneurin-2 and human Latrophilin-3 binary complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2020-01-09
Authors: Xie, Y., Li, J., Arac, D., Zhao, M.
PDB entry 6vhi: Crystal structure of the human ILRUN Fw domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2020-01-09
Authors: Caputo, A.T., Adams, T.E.
PDB entry 6vhj: Solution NMR of Prochlorosin 1.1 produced by Prochlorococcus MIT 9313
Classification: UNKNOWN FUNCTION
Source organism: Prochlorococcus marinus str. MIT 9313
Experimental method: SOLUTION NMR
Deposited: 2020-01-09
Authors: Bobeica, S.C., van der Donk, W.A., Tang, W.
PDB entry 6vhl: Paired Helical Filament from Alzheimer's Disease Human Brain Tissue
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-01-10
Authors: Arakhamia, T., Lee, C.E., Carlomagno, Y., Duong, D.M., Kundinger, S.R., Wang, K., Williams, D., DeTure, M., Dickson, D.W., Cook, C.N., Seyfried, N.T., Petrucelli, L., Fitzpatrick, A.W.P.
PDB entry 6vhn: Wild type EGFR in complex with LN2057
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-01-10
Authors: Heppner, D.E., Eck, M.J.
PDB entry 6vho: Glycoside hydrolase family 16 endo-glucanase from Bacteroides ovatus in complex with G4G4G3G-NHCOCH2Br
Classification: HYDROLASE
Source organism: Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.148 Å
Deposited: 2020-01-10
Authors: Tamura, K., Brumer, H., van Petegem, F.
PDB entry 6vhp: Wild type EGFR in complex with LN2899
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2020-01-10
Authors: Heppner, D.E., Eck, M.J.
PDB entry 6vhq: Crystal structure of Bacillus subtilis levansucrase (D86A/E342A) in complex with oligosaccharides
Classification: TRANSFERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.047 Å
Deposited: 2020-01-10
Authors: Diaz-Vilchis, A., Raga-Carbajal, E., Rojas-Trejo, S., Olvera, C., Rudino-Pinera, E.
PDB entry 6vhr: Structure of PE5-PPE4-EspG3 complex from the type VII (ESX-3) secretion system, space group I422
Classification: PROTEIN TRANSPORT
Source organism: Mycobacterium marinum (strain ATCC BAA-535 / M); Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2020-01-10
Authors: Williamson, Z.A., Korotkov, K.V.
PDB entry 6vhs: Crystal structure of CTX-M-14 in complex with beta-lactamase inhibitor ETX1317
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2020-01-10
Authors: Sacco, M.D., Chen, Y.
PDB entry 6vht: Klebsiella oxytoca NpsA N-terminal subdomain in space group C2
Classification: BIOSYNTHETIC PROTEIN
Source organism: Klebsiella oxytoca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-01-10
Authors: Kreitler, D.F., Gulick, A.M.
PDB entry 6vhu: Klebsiella oxytoca NpsA N-terminal subdomain in space group P21
Classification: BIOSYNTHETIC PROTEIN
Source organism: Klebsiella oxytoca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-01-10
Authors: Kreitler, D.F., Gulick, A.M.
PDB entry 6vhv: Klebsiella oxytoca NpsA in complex with 3-hydroxyanthranilyl-AMSN
Classification: BIOSYNTHETIC PROTEIN
Source organism: Klebsiella oxytoca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2020-01-10
Authors: Kreitler, D.F., Gulick, A.M.
PDB entry 6vhw: Klebsiella oxytoca NpsA N-terminal subdomain in complex with 3-hydroxybenzoyl-AMSN
Classification: BIOSYNTHETIC PROTEIN
Source organism: Klebsiella oxytoca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-01-10
Authors: Kreitler, D.F., Gulick, A.M.
PDB entry 6vhx: Klebsiella oxytoca NpsA N-terminal subdomain in complex with 3-hydroxyanthranilyl-AMSN
Classification: BIOSYNTHETIC PROTEIN
Source organism: Klebsiella oxytoca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-01-10
Authors: Kreitler, D.F., Gulick, A.M.
PDB entry 6vhy: NpsA-ThdA, an artificially fused Adenylation-PCP di-domain NRPS from Klebsiella oxytoca
Classification: BIOSYNTHETIC PROTEIN
Source organism: Klebsiella oxytoca
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-01-10
Authors: Kreitler, D.F., Gulick, A.M.
PDB entry 6vhz: Klebsiella oxytoca NpsA N-terminal subdomain in complex with anthranilyl-AMSN
Classification: BIOSYNTHETIC PROTEIN
Source organism: Klebsiella oxytoca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2020-01-10
Authors: Kreitler, D.F., Gulick, A.M.
PDB entry 6vi0: Cryo-EM structure of VRC01.23 in complex with HIV-1 Env BG505 DS.SOSIP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2020-01-10
Authors: Gorman, J., Kwong, P.D.
PDB entry 6vi1: Structure of Fab4 bound to P22 TerL(1-33)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-01-11
Authors: Cingolani, G., Lokareddy, R., Ko, Y.
PDB entry 6vi2: Structure of the unaligned Fab4
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2020-01-11
Authors: Cingolani, G., Lokareddy, R., Ko, Y.
PDB entry 6vi3: Straight Filament from Alzheimer's Disease Human Brain Tissue
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-01-11
Authors: Arakhamia, T., Lee, C.E., Carlomagno, Y., Duong, D.M., Kundinger, S.R., Wang, K., Williams, D., DeTure, M., Dickson, D.W., Cook, C.N., Seyfried, N.T., Petrucelli, L., Fitzpatrick, A.W.P.
PDB entry 6vi4: Nanobody-Enabled Monitoring of Kappa Opioid Receptor States
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2020-01-11
Authors: Che, T., Roth, B.L.
PDB entry 6vi5: Observing a ring-cleaving dioxygenase in action through a crystalline lens - a resting state structure
Classification: OXIDOREDUCTASE
Source organism: Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.604 Å
Deposited: 2020-01-12
Authors: Wang, Y., Liu, F., Yang, Y., Liu, A.
PDB entry 6vi6: Observing a ring-cleaving dioxygenase in action through a crystalline lens - a substrate monodentately bound structure
Classification: OXIDOREDUCTASE
Source organism: Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2020-01-12
Authors: Wang, Y., Liu, F., Yang, Y., Liu, A.