LiteFold/PDB huggingface dataset:
PDB entry 9hfe: Crystal structure of human TRF1 TRFH domain in complex with compound 10
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-11-15
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hff: Crystal structure of human TRF1 TRFH domain in complex with compound 11
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-11-15
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hfg: Crystal structure of human TRF1 TRFH domain in complex with compound 14
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-11-15
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hfh: Crystal structure of human TRF1 TRFH domain in complex with compound 16
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2024-11-15
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hfi: Crystal structure of human TRF1 TRFH domain in complex with compound 17
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2024-11-15
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hfj: Crystal structure of the NTE domain of SusCdex (BT3090) dextran transporter
Classification: TRANSPORT PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-11-16
Authors: Feasey, M., Basle, A., van den Berg, B.
PDB entry 9hfk: Cryo-EM structure of the freshwater actinorhodopsin, Rhodoluna lacicola (RlActR)
Classification: PROTON TRANSPORT
Source organism: Rhodoluna lacicola
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-11-17
Authors: Djabeur, N., Jeckelmann, J.-M., Fotiadis, D.
PDB entry 9hfl: Cryo-EM structure of the human snRNA export complex comprising CBC-PHAX-CRM1-RanGTP and capped-RNA
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2024-11-18
Authors: Dubiez, E., Cusack, S., Kadlec, J.
PDB entry 9hfm: Translation-initiation state of human mitochondrial ribosome small subunit (State D)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-11-18
Authors: Finke, A.F., Heinrichs, M., Aibara, S., Richter-Dennerlein, R., Hillen, H.S.
PDB entry 9hfn: Translation-initiation state of human mitochondrial ribosome small subunit (State E)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-18
Authors: Finke, A.F., Heinrichs, M., Aibara, S., Richter-Dennerlein, R., Hillen, H.S.
PDB entry 9hfo: Translation-initiation state of human mitochondrial ribosome small subunit (State G)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-11-18
Authors: Finke, A.F., Heinrichs, M., Aibara, S., Richter-Dennerlein, R., Hillen, H.S.
PDB entry 9hfp: ROCK2 IN COMPLEX WITH CPD7
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2024-11-18
Authors: Scheufler, C., Griessner, A.
PDB entry 9hfq: Cryo-EM structure of human CDADC1 inactive mutant (E400A): trimer without a ligand
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-11-18
Authors: Slyvka, A., Rathore, I., Yang, R., Kanai, T., Lountos, G., Wang, Z., Skowronek, K., Czarnocki-Cieciura, M., Wlodawer, A., Bochtler, M.
PDB entry 9hfr: Cryo-EM structure of human CDADC1 inactive mutant (E400A): hexamer without a ligand
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-11-18
Authors: Slyvka, A., Rathore, I., Yang, R., Kanai, T., Lountos, G., Wang, Z., Skowronek, K., Czarnocki-Cieciura, M., Wlodawer, A., Bochtler, M.
PDB entry 9hfs: Cryo-EM structure of human CDADC1 inactive mutant (E400A): hexamer with dCTP bound in the active site
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-11-18
Authors: Slyvka, A., Rathore, I., Yang, R., Kanai, T., Lountos, G., Wang, Z., Skowronek, K., Czarnocki-Cieciura, M., Wlodawer, A., Bochtler, M.
PDB entry 9hft: Cryo-EM structure of human CDADC1 inactive mutant (E400A): hexamer with 5mdCTP bound in the active site
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-11-18
Authors: Slyvka, A., Rathore, I., Yang, R., Kanai, T., Lountos, G., Wang, Z., Skowronek, K., Czarnocki-Cieciura, M., Wlodawer, A., Bochtler, M.
PDB entry 9hfu: Caprin1 peptide bound to SPOP MATH domain
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-11-18
Authors: Makhlouf, L., Zeqiraj, E.
PDB entry 9hfv: MyD88 peptide_2 bound to SPOP MATH domain
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-11-18
Authors: Makhlouf, L., Zeqiraj, E.
PDB entry 9hfw: SRC-3 (NCoA-3) peptide bound to SPOP MATH domain
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-11-18
Authors: Makhlouf, L., Zeqiraj, E.
PDB entry 9hfx: Crystal structure of SARS CoV-2 3CLpro (Mpro) with ALG-097558
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-11-18
Authors: Tauchert, M.J., Maskos, K., McGowan, D.C., Stoycheva, A.D.
PDB entry 9hfy: Crystal structure of SARS CoV-2 3CLpro (Mpro) with ALG-097078
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.282 Å
Deposited: 2024-11-18
Authors: Tauchert, M.J., Maskos, K., McGowan, D.C., Stoycheva, A.D.
PDB entry 9hfz: Crystal structure of M. smegmatis GMP reductase in complex with IMP.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-11-18
Authors: Dolezal, M., Pichova, I.
PDB entry 9hg0: Crystal structure of M. smegmatis GMP reductase with XMP* intermidiate in complex with NADP+ and IMP.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-11-18
Authors: Dolezal, M., Pichova, I.
PDB entry 9hg1: Crystal structure of M. smegmatis GMP reductase in complex with GMP and ATP.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-11-18
Authors: Dolezal, M., Klima, M., Pichova, I.
PDB entry 9hg2: Crystal structure of M. smegmatis GMP reductase in complex with IMP and ATP.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-11-18
Authors: Dolezal, M., Pichova, I.
PDB entry 9hg3: Crystal structure of M. smegmatis GMP reductase in complex with GMP and GTP.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-11-18
Authors: Dolezal, M., Pichova, I.
PDB entry 9hg4: NACHT domain of NLRP3 in complex with DFV890
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.771 Å
Deposited: 2024-11-18
Authors: Dekker, C.
PDB entry 9hg5: BAM-SurA complex in the swing-in state with full length BamC resolved
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-11-19
Authors: Lehner, P.A., Jakob, R.P., Hiller, S.
PDB entry 9hg6: BAM-SurA complex in the swing-in state
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2024-11-19
Authors: Lehner, P.A., Jakob, R.P., Hiller, S.
PDB entry 9hg7: BAM-SurA complex in the swing-out state
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-11-19
Authors: Lehner, P.A., Jakob, R.P., Hiller, S.
PDB entry 9hg8: BAM-SurA complex in the swing-out state with BamC resolved
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-11-19
Authors: Lehner, P.A., Jakob, R.P., Hiller, S.
PDB entry 9hg9: BAM-SurA-darobactin complex in the swing-in state
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Photorhabdus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-11-19
Authors: Lehner, P.A., Jakob, R.P., Hiller, S.
PDB entry 9hga: BAM-SurA-darobactin complex in the swing-out state
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Photorhabdus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2024-11-19
Authors: Lehner, P.A., Jakob, R.P., Hiller, S.
PDB entry 9hgb: Amyloid fibril from the antimicrobial peptide citropin 1-3 - Polymorph Nr.3
Classification: ANTIMICROBIAL PROTEIN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-11-19
Authors: Strati, F., Rayan, B., Landau, M., Siavash, M., Cali, P.M., Monistrol, J., Golubev, A., Gustavsson, E., Bloch, Y.
PDB entry 9hgc: Crystal structure of human GABARAPL1 in complex with cyclic peptide GAB_D8
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2024-11-19
Authors: Wilms, J.A., Willbold, D., Weiergraeber, O.H.
PDB entry 9hgd: Crystal structure of human GABARAP in complex with cyclic peptide GAB_D23
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-19
Authors: Ueffing, A., Wilms, J.A., Willbold, D., Weiergraeber, O.H.
PDB entry 9hge: PB1 domain of p62/SQSTM1
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2024-11-19
Authors: Berkamp, S., Jungbluth, L., Katranidis, A., Mostafavi, S., Sachse, C.
PDB entry 9hgf: Crystal Structure of the Plasmodium vivax Bromodomain PvBDP1 in complex with RMM25
Classification: TRANSCRIPTION
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-11-19
Authors: Amann, M., Huegle, M., Einsle, O., Guenther, S.
PDB entry 9hgg: SETD2 peptide bound to SPOP MATH domain
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-11-19
Authors: Makhlouf, L., Zeqiraj, E.
PDB entry 9hgh: MyD88 peptide_1 bound to SPOP MATH domain
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-11-19
Authors: Makhlouf, L., Zeqiraj, E.
PDB entry 9hgi: HSV-1 Origin Binding Protein in complex with double-stranded DNA recognition sequence OriS with 6 basepairs removed from the AT-rich region
Classification: DNA BINDING PROTEIN
Source organism: Human alphaherpesvirus 1 strain KOS; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2024-11-19
Authors: Gustavsson, E., Grunewald, K., Elias, P., Hallberg, B.M.
PDB entry 9hgj: HSV-1 Origin Binding Protein in complex with double-stranded DNA recognition sequence OriS and non-hydrolyzable ATP analog
Classification: DNA BINDING PROTEIN
Source organism: Human alphaherpesvirus 1 strain KOS; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2024-11-19
Authors: Gustavsson, E., Grunewald, K., Elias, P., Hallberg, B.M.
PDB entry 9hgk: Crystal Structure of the Coxiella burnetii 2-methylisocitrate lyase
Classification: CYTOSOLIC PROTEIN
Source organism: Coxiella burnetii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-11-19
Authors: Stuart, W., Isupov, M., Harmer, N.J.
PDB entry 9hgl: Amyloid fibril from the antimicrobial peptide citropin 1-3 - Polymorph Nr.2
Classification: ANTIMICROBIAL PROTEIN
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-11-19
Authors: Strati, F., Rayan, B., Pigozzi, C.M., Bloch, Y., Mostafavi, S., Monistrol, J., Golubev, A., Gustavsson, E., Landau, M.
PDB entry 9hgm: Structure of human DNMT2 with bound allosteric inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-11-20
Authors: Schwan, M., Kopp, J., Sinning, I.
PDB entry 9hgn: Cryo-EM structure of VSV-Indiana (MUDD-SUMMERS strain) glycoprotein under its acidic conformation
Classification: VIRAL PROTEIN
Source organism: Vesicular stomatitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-11-20
Authors: Albertini, A., Minoves, M.J., OuldAli, M., Gaudin, Y., Schoehn, G., Zarkadas, E.
PDB entry 9hgo: Crystal Structure of the Coxiella burnetii E110Q Mutant 2-methylisocitrate lyase
Classification: CYTOSOLIC PROTEIN
Source organism: Coxiella burnetii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2024-11-20
Authors: Stuart, W., Isupov, M., Harmer, N.J.
PDB entry 9hgp: Human Carbonic Anhydrase II in complex with a synthetic aromatic oligoamide foldamer
Classification: LYASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-11-20
Authors: Sigl, J.C., Wang, L., Huc, I.
PDB entry 9hgq: Crystal Structure of the Coxiella burnetii 2-methylisocitrate lyase Bound to Substrate 2-MIC
Classification: CYTOSOLIC PROTEIN
Source organism: Coxiella burnetii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-11-20
Authors: Stuart, W., Isupov, M., Harmer, N.J.
PDB entry 9hgr: In vitro grown WT Alpha-Synuclein Fibrils
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-11-20
Authors: Sicking, K., Al-Azzani, M., Outeiro, T.F., Fernandez-Busnadiego, R.
PDB entry 9hgs: In vitro grown G14R Alpha-Synuclein Fibrils
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-11-20
Authors: Sicking, K., Fernandez-Busnadiego, R.
PDB entry 9hgt: Amyloid fibril from the antimicrobial peptide citropin 1-3 - Polymorph Nr.1L
Classification: ANTIMICROBIAL PROTEIN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-11-20
Authors: Strati, F., Landau, M., Siavash, M., Cali, P.M., Monistrol, J., Golubev, A., Gustavsson, E., Bloch, Y.
PDB entry 9hgu: E-selectin complexed with glycomimetic ligand BW990
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-11-20
Authors: Jakob, R.P., Ernst, B.
PDB entry 9hgv: E-selectin complexed with glycomimetic ligand BW1002
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2024-11-20
Authors: Jakob, R.P., Ernst, B.
PDB entry 9hgw: E-selectin complexed with glycomimetic ligand BW1005
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-11-20
Authors: Jakob, R.P., Ernst, B.
PDB entry 9hgx: E-selectin complexed with glycomimetic ligand BW1025
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-11-20
Authors: Jakob, R.P., Ernst, B.
PDB entry 9hgy: E-selectin complexed with glycomimetic ligand BW1030
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-11-20
Authors: Jakob, R.P., Ernst, B.
PDB entry 9hgz: Crystal structure of recombinant swine butyrylcholinesterase
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2024-11-20
Authors: Brazzolotto, X., Nachon, F.
PDB entry 9hh0: Crystal structure of recombinant soman-aged swine butyrylcholinesterase
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2024-11-20
Authors: Brazzolotto, X., Nachon, F.
PDB entry 9hh1: LysR Type Transcriptional Regulator LsrB from Agrobacterium tumefaciens
Classification: DNA BINDING PROTEIN
Source organism: Agrobacterium fabrum str. C58
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-11-20
Authors: Elders, H., Schmidt, J.J., Fiedler, R., Hofmann, E., Narberhaus, F.
PDB entry 9hh2: Crystal structure of the family S1_19 carrageenan sulfatase ZgCgsA from Zobellia galactanivorans in complex with hybrid a-i-neocarratetraose
Classification: HYDROLASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2024-11-20
Authors: Chevenier, A., Czjzek, M., Michel, G., Ficko-Blean, E.
PDB entry 9hh3: Structure of the apo ZgCgsA carrageenan-sulfatase (S1_19) from the marine bacterium Zobellia galactanivorans
Classification: HYDROLASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-11-20
Authors: Chevenier, A., Czjzek, M., Michel, G., Ficko-Blean, E.
PDB entry 9hh4: Crystal structure of the family S1_19 carrageenan sulfatase ZgCgsA from Zobellia galactanivorans in complex with hybrid b-k-neocarratetraose
Classification: HYDROLASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2024-11-21
Authors: Chevenier, A., Czjzek, M., Michel, G., Ficko-Blean, E.
PDB entry 9hh5: Crystal Structure of nsp15 Endoribonuclease from SARS CoV-2 in Complex with Sepantronium (YM-155)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-11-21
Authors: Chatziefthymiou, S.D., Kolbe, M., Hakanpaeae, J., Labahn, J., Windshuegel, B.
PDB entry 9hh6: Crystal Structure of Nsp15 Endoribonuclease from SARS CoV-2 in Complex with TAS-103
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION, SOLUTION SCATTERING
Resolution: 2 Å
Deposited: 2024-11-21
Authors: Chatziefthymiou, S.D., Kolbe, M., Hakanpaeae, J., Labahn, J., Windshuegel, B.
PDB entry 9hh7: Crystal Structure of the Plasmodium falciparum Bromodomain PfBDP1 in complex with RMM23
Classification: TRANSCRIPTION
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-11-21
Authors: Amann, M., Huegle, M., Einsle, O., Guenther, S.
PDB entry 9hh8: Crystal Structure of the Plasmodium vivax Bromodomain PvBDP1 in complex with RMM23
Classification: TRANSCRIPTION
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-11-21
Authors: Amann, M., Huegle, M., Einsle, O., Guenther, S.
PDB entry 9hh9: Cryo-EM structure of VSV-Indiana glycoprotein (MUDD-SUMMERS strain) in its pre-fusion conformation in complex with 8G5F11 Fab
Classification: VIRAL PROTEIN
Source organism: Mus sp.; Vesicular stomatitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-11-21
Authors: Albertini, A., Minoves, M.J., OuldAli, M., Gaudin, Y., Schoehn, G., Zarkadas, E.
PDB entry 9hha: Crystal Structure of the Plasmodium vivax Bromodomain PvBDP1 in complex with RMM4
Classification: TRANSCRIPTION
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-11-21
Authors: Amann, M., Huegle, M., Einsle, O., Guenther, S.
PDB entry 9hhb: Crystal Structure of the Plasmodium vivax Bromodomain PvBDP1 in complex with RMM21
Classification: TRANSCRIPTION
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-11-21
Authors: Amann, M., Huegle, M., Einsle, O., Guenther, S.
PDB entry 9hhc: Crystal Structure of the Plasmodium falciparum Bromodomain PfBDP1 in complex with MPM2
Classification: TRANSCRIPTION
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-11-21
Authors: Amann, M., Huegle, M., Einsle, O., Guenther, S.
PDB entry 9hhd: Crystal Structure of the Plasmodium falciparum Bromodomain PfBDP1 in complex with RMM2
Classification: TRANSCRIPTION
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-11-21
Authors: Amann, M., Huegle, M., Einsle, O., Guenther, S.
PDB entry 9hhe: Structure of the Ist2 TMEM16 homology domain in the detergent GDN
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-11-21
Authors: Arndt, M., Dutzler, R.
PDB entry 9hhg: A rare open conformation for Ubl2 domain of papain-like protease of SARS-CoV2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-11-21
Authors: Freiherr von Scholley, G.L., Schaefer, M., Soler Lopez, M., Hillig, R., Mueller-Dieckmann, C., Kandiah, E.
PDB entry 9hhh: A rare open conformation for Ubl2 domain of papain-like protease C111S of SARS-CoV2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-11-21
Authors: Freiherr von Scholley, G.L., Schaefer, M., Soler Lopez, M., Hillig, R., Mueller-Dieckmann, C., Kandiah, E.
PDB entry 9hhi: A rare open conformation for Ubl2 domain of papain-like protease without zinc of SARS-CoV2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-11-21
Authors: Freiherr von Scholley, G.L., Schaefer, M., Soler Lopez, M., Hillig, R., Mueller-Dieckmann, C., Kandiah, E.
PDB entry 9hhj: ManDH5 E303Q in complex with mannotetraose after co-crystalliztion with mannotetraose at 1.6 angstroms resolution a beta-D-Mannanase of GH5 family from Dictyoglomus thermophilium
Classification: HYDROLASE
Source organism: Dictyoglomus thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-11-21
Authors: Sivron, Y., Romano, A., Shoham, Y., Shoham, G.
PDB entry 9hhk: Crystal structure of human TRF1 TRFH domain in complex with compound 2
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2024-11-21
Authors: Casale, G., Le Bihan, Y.-V., Van Montfort, R.L.M., Guettler, S.
PDB entry 9hhl: Structure of Dynein-Dynactin-NuMA-LIS1
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.53 Å
Deposited: 2024-11-21
Authors: d'Amico, E.A., Carter, A.P.
PDB entry 9hhm: Crystal structure of phosphatidyl inositol 4-kinase II beta in complex with HH5129
Classification: TRANSFERASE
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-11-22
Authors: Klima, M., Boura, E.
PDB entry 9hho: A conserved beta-sandwich fold is required for secretion of lipoproteins by a novel Type I secretion system
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli ETEC H10407
Experimental method: SOLUTION NMR
Deposited: 2024-11-22
Authors: Hodges, F.J., Icke, C., Knowles, T.J., Rooke, J.L., Cole, J.A., Cunningham, A.F., Torres, V.V.L., Henderson, I.R.
PDB entry 9hhq: Human monocarboxylate transporter 10
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-11-22
Authors: Nordlin, K.P., Bagenholm, V., Gourdon, P.E.
PDB entry 9hhr: Cryo-EM structure of VSV-Indiana glycoprotein (MUDD-SUMMERS strain) in its post-fusion conformation in complex with 8G5F11 Fab
Classification: VIRAL PROTEIN
Source organism: Mus sp.; Vesicular stomatitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2024-11-22
Authors: Albertini, A., Minoves, M.J., OuldAli, M., Gaudin, Y., Schoehn, G., Zarkadas, E.
PDB entry 9hhs: Crystal Structure of the Coxiella burnetii R152Q Mutant 2-methylisocitrate lyase
Classification: CYTOSOLIC PROTEIN
Source organism: Coxiella burnetii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-11-22
Authors: Stuart, W., Isupov, M., Harmer, N.J.
PDB entry 9hhw: Crystal structure of TTBK1 with a covalent compound GCL95
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-11-22
Authors: Wang, G., Seidler, N., Gehringer, M., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 9hhy: Crystal Structure of the Coxiella burnetii 2-methylisocitrate lyase Bound to Inhibitor Isocitric Acid
Classification: CYTOSOLIC PROTEIN
Source organism: Coxiella burnetii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2024-11-22
Authors: Stuart, W., Isupov, M., Harmer, N.J.
PDB entry 9hi0: STRUCTURE OF HUMAN UDP-GALACTOSE 4-EPIMERASE IN COMPLEX WITH COMPOUND WBX04
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2024-11-22
Authors: Mouilleron, S., Schumann, B., Browne, W., Purkiss, A., Weckwerth, T., Ogrodowicz, R., Prema, R., Kunzelmann, S., Roustan, C.
PDB entry 9hi1: STRUCTURE OF HUMAN UDP-GALACTOSE 4-EPIMERASE IN COMPLEX WITH COMPOUND WBX09
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2024-11-22
Authors: Mouilleron, S., Schumann, B., Browne, W., Purkiss, A., Weckwerth, T., Ogrodowicz, R., Prema, R., Kunzelmann, S., Roustan, C.
PDB entry 9hi2: STRUCTURE OF HUMAN UDP-GALACTOSE 4-EPIMERASE IN COMPLEX WITH COVALENT COMPOUND WBC10
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2024-11-22
Authors: Mouilleron, S., Schumann, B., Browne, W., Purkiss, A., Weckwerth, T., Ogrodowicz, R., Prema, R., Kunzelmann, S., Roustan, C.
PDB entry 9hi3: C-terminal domain of pectobacterial FusB in complex with spinach ferredoxin 1
Classification: PROTEIN TRANSPORT
Source organism: Pectobacterium carotovorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-11-22
Authors: Wojnowska, M., Bogucka, A.
PDB entry 9hi4: Structure of FI6-focused design_03 scaffold in complex with FI6-Fab
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacteroides uniformis ATCC 8492; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-11-24
Authors: Cramer, J.T., Krey, T.
PDB entry 9hi5: Structure of scaffold FI6-focused design_02
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacteroides uniformis ATCC 8492
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-11-24
Authors: Cramer, J.T., Krey, T.
PDB entry 9hi6: Structure of scaffold FI6-focused design_04 in complex with FI6-Fab
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacteroides uniformis ATCC 8492; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-24
Authors: Cramer, J.T., Krey, T.
PDB entry 9hi7: Structure of MC.7.G5 T cell receptor in complex with MR1 R9H
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2024-11-24
Authors: Karuppiah, V.
PDB entry 9hi8: Amyloid fibril from the antimicrobial peptide citropin 1-3 - Polymorph Nr.3L
Classification: ANTIMICROBIAL PROTEIN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2024-11-25
Authors: Strati, F., Pigozzi, C.M., Bloch, Y., Rayan, B., Mostafavi, S., Monistrol, J., Golubev, A., Gustavsson, E., Landau, M.
PDB entry 9hia: K115 acetylated human muscle pyruvate kinase, isoform M2 (PKM2), in complex with FBP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-11-25
Authors: Pavlenko, D., Nudelman, H., Shahar, A., Arbely, E.
PDB entry 9hib: K115 acetylated human muscle pyruvate kinase, isoform M2 (PKM2)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-11-25
Authors: Pavlenko, D., Nudelman, H., Shahar, A., Arbely, E.
PDB entry 9hic: K166 acetylated human muscle pyruvate kinase, isoform M2 (PKM2), in complex with FBP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-11-25
Authors: Pavlenko, D., Nudelman, H., Shahar, A., Arbely, E.
PDB entry 9hid: Amyloid fibril from the antimicrobial peptide citropin 1-3 - Polymorph Nr.2L
Classification: ANTIMICROBIAL PROTEIN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-11-25
Authors: Strati, F., Pigozzi, C.M., Bloch, Y., Rayan, B., Mostafavi, S., Monistrol, J., Golubev, A., Gustavsson, E., Landau, M.
PDB entry 9hif: Crystal Structure of Human cystathionine beta-synthase variant R336C
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.65 Å
Deposited: 2024-11-26
Authors: Conter, C., Martinez-Cruz, L.A., Fernandez-Rodriguez, C.
PDB entry 9hih: Mouse IL-2 fused to S4B6 Fab fragment
Classification: CYTOKINE/IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-11-26
Authors: Blaha, J., Skorepa, O., Vanek, O.
PDB entry 9hij: X-ray structure of Perm1, a circularly permuted mutant of the sweet protein MNEI
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-11-26
Authors: Bologna, A., Wang, P.-H., Gramazio, S., Essen, L.-O., Spadaccini, R.
PDB entry 9hik: X-ray structure of Perm3, a circularly permuted mutant of the sweet protein MNEI
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2024-11-26
Authors: Bologna, A., Wang, P.-H., Lucignano, R., Essen, L.-O., Spadaccini, R.
PDB entry 9hil: Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with Cytidine-5'-monophosphate (CMP)
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-11-26
Authors: Kirck, L.L., Santagostino, E., Tittmann, K.
PDB entry 9him: ManDH5 E303Q in complex with mannotriose after co-crystalliztion with mannohexaose at 1.36 angstroms resolution a beta-D-Mannanase of GH5 family from Dictyoglomus thermophilium
Classification: HYDROLASE
Source organism: Dictyoglomus thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2024-11-26
Authors: Sivron, Y., Romano, A., Shoham, Y., Shoham, G.
PDB entry 9hin: Crystal structure of human TRIM7 PRYSPRY domain bound to ((S)-2-(6-(6-methoxypyridin-3-yl)-1-oxoisoindolin-2-yl)-3-phenylpropanoyl)-L-glutamine
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-11-26
Authors: Lenz, C., Haman, A., Spissinger, H., Knapp, S., Kraemer, A., Structural Genomics Consortium (SGC)
PDB entry 9hio: RKEC1 DNA aptamer bound to dopamine
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-11-26
Authors: Largy, E., Kaiyum, Y.A., Chao, E.H.P., Vialet, B., Johnson, P.E., Mackereth, C.D.
PDB entry 9hip: MnmE-MnmG a2b2 complex
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-11-27
Authors: Maes, L., Galicia, C., Fislage, M., Versees, W.
PDB entry 9hiq: MnmE-MnmG a4b2 complex
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.02 Å
Deposited: 2024-11-27
Authors: Maes, L., Galicia, C., Fislage, M., Versees, W.
PDB entry 9hir: MnmG dimer within the MnmE-MnmG a4b2 complex
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.12 Å
Deposited: 2024-11-27
Authors: Maes, L., Galicia, C., Fislage, M., Versees, W.
PDB entry 9his: Extracellular components BamHIJK of the Bacteroides thetaiotaomicron BAM machinery
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2024-11-27
Authors: Silale, A., van den Berg, B.
PDB entry 9hit: Structure of P167S/D240G BlaC from Mycobacterium tuberculosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-11-27
Authors: Sun, J., Bruenle, S., Ubbink, M.
PDB entry 9hiu: Cryo-EM structure of CDK2-cyclin A bound to a GMNC peptide
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-11-27
Authors: de Martin Garrido, N., Ord, M., Cushing, V.I., Greber, B.J., Pryciak, P.M., Davey, N.E.
PDB entry 9hiv: BamADG components of the Bacteroides thetaiotaomicron BAM machinery
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2024-11-27
Authors: Silale, A., van den Berg, B.
PDB entry 9hiw: Cryo-EM structure of CDK2-cyclin A bound to a SAMHD1 peptide
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-11-27
Authors: de Martin Garrido, N., Ord, M., Cushing, V.I., Greber, B.J., Pryciak, P.M., Davey, N.E.
PDB entry 9hix: Cryo-EM structure of CAK (CDK7 D97N mutant) in complex with THZ1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-11-27
Authors: Cushing, V.I., Greber, B.J., Ali, S., Lai, C.-F., Bevan, C.L., Coombes, R.C., Buluwela, L.
PDB entry 9hiy: Cryo-EM structure of CAK (CDK7 D97N mutant) in complex with ATPgS
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-11-27
Authors: Cushing, V.I., Greber, B.J., Ali, S., Lai, C.-F., Bevan, C.L., Coombes, R.C., Buluwela, L.
PDB entry 9hiz: Complex of the Nanofitin Sac7d-C3(C24A) with a human IgG1 Fc fragment
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Sulfolobus acidocaldarius DSM 639
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-11-27
Authors: Eichinger, A., Skerra, A.
PDB entry 9hj0: Cryo-EM structure of CAK (CDK7 D97N mutant) in complex with Samuraciclib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-11-27
Authors: Cushing, V.I., Greber, B.J., Ali, S., Lai, C.-F., Bevan, C.L., Coombes, R.C., Buluwela, L.
PDB entry 9hj1: Cryo-EM structure of CDK2-cyclin A bound to a SCAPER peptide
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-11-27
Authors: de Martin Garrido, N., Ord, M., Cushing, V.I., Greber, B.J., Pryciak, P.M., Davey, N.E.
PDB entry 9hj2: Structure of P167S/D240G/D172A/S104G/H184R BlaC from Mycobacterium tuberculosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-11-27
Authors: Sun, J., Bruenle, S., Ubbink, M.
PDB entry 9hj3: Bacteroides thetaiotaomicron BAM complex
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2024-11-27
Authors: Silale, A., van den Berg, B.
PDB entry 9hj4: Crystal structure of CD73 (ecto-5'-nucleotidase) complexed to 8-butylthioadenosine 5'monophosphate (compound 3 in publication) in the open enzyme state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2024-11-27
Authors: Strater, N., Moschuetz, S., Bi, C., Muller, C.E.
PDB entry 9hj5: Engineered Fructosyl Peptide Oxidase - D7 mutant
Classification: OXIDOREDUCTASE
Source organism: Parastagonospora nodorum SN15
Experimental method: X-RAY DIFFRACTION
Resolution: 2.093 Å
Deposited: 2024-11-28
Authors: Parisini, E., Bhattacharya, S., Rozanov, L.
PDB entry 9hj6: TRPML1 in complex with compound 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-11-28
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hj7: Structure of Chitinase 35 from Metschnikowia pulcherrima (MpChit35)
Classification: HYDROLASE
Source organism: Metschnikowia pulcherrima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-11-28
Authors: Fernandez-Garcia, A., Sanz-Aparicio, J.
PDB entry 9hj8: TRPML1 in complex with compound 5
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-11-28
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hj9: H1-H3 chimeric hemagglutinin
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-11-28
Authors: Seraj, N., Harshbarger, W., Mallett, C.P., Vassilev, V.
PDB entry 9hjc: Cryo-EM structure of thiamine-bound human TPK1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-11-28
Authors: Gabriel, F., Loew, C.
PDB entry 9hjd: Cryo-EM structure of domperidone-bound human SLC19A3 in inward-open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-11-28
Authors: Gabriel, F., Loew, C.
PDB entry 9hjg: Crystal structure of human CD73 (ecto-5'-nucleotidase) in complex with an N6-disubstituted acyclic ADP analog (compound 26 in publication) in the closed state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2024-11-29
Authors: Strater, N., Moschuetz, S., Federico, S., Renn, C., Muller, C.E.
PDB entry 9hjh: Structure of compound 1 bound to SARS-CoV-2 main protease
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-11-29
Authors: Mac Sweeney, A., Hazemann, J.
PDB entry 9hji: Structure of Trypanosoma cruzi Prolyl Oligopeptidase in the close state
Classification: HYDROLASE
Source organism: Trypanosoma cruzi
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2024-11-29
Authors: Batra, S., Ragan, T.J., Hesketh, E., Campeotto, I.
PDB entry 9hjj: Structure of Trypanosoma cruzi Prolyl Oligopeptidase in the close state
Classification: HYDROLASE
Source organism: Trypanosoma cruzi
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.82 Å
Deposited: 2024-11-29
Authors: Batra, S., Ragan, T.J., Hesketh, E., Campeotto, I.
PDB entry 9hjk: Cryo-EM structure of the Arabidopsis thaliana CAT4 transporter in the outward-open apo state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2024-11-29
Authors: Kolokouris, D., Kato, T., Newstead, S.
PDB entry 9hjm: Porphyromonas gingivalis BAM complex
Classification: MEMBRANE PROTEIN
Source organism: Porphyromonas gingivalis ATCC 33277
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2024-11-29
Authors: Madej, M., Silale, A., van den Berg, B.
PDB entry 9hjn: Structure of UDP-Galactose-4-epimerase (GalE) bound to fragment from Diamond XChem experiment.
Classification: CARBOHYDRATE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.651 Å
Deposited: 2024-11-29
Authors: Browne, W.
PDB entry 9hjo: FANCM-FAAP24-dsDNA complex
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.401 Å
Deposited: 2024-11-29
Authors: Coulthard-Graf, R.J., Briggs, D.C., McDonald, N.Q., Deans, A.
PDB entry 9hjp: Improved structure of mouse Gasdermin D
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.636 Å
Deposited: 2024-11-29
Authors: De Colibus, L., Biasutto, A., Jazayeri, A., Duerr, K.L.
PDB entry 9hjs: Crystal structure of human geranylgeranyl diphosphate synthase mutant R235C
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2024-12-01
Authors: Yehia, R., Giladi, M., Haitin, Y.
PDB entry 9hjt: Structure of Zincore (SEPHS1:QRICH1) binding to ZFP91 on DNA
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2024-12-02
Authors: Borza, R., Perrakis, A.
PDB entry 9hju: Structure of 2x Zincore (SEPHS1:QRICH1) binding to ZFP91 on DNA
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2024-12-02
Authors: Borza, R., Perrakis, A.
PDB entry 9hjv: Crystal structure of flavin-dependent monooxygenase Tet(X4) in complex with prochlorperazine
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-12-02
Authors: Beech, M.J., Smith, H.G., Allen, M.D., Farley, A.J.M., Schofield, C.J.
PDB entry 9hjw: Crystal structure of flavin-dependent monooxygenase Tet(X4) in complex with tegaserod
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-12-02
Authors: Smith, H.G., Beech, M.J., Allen, M.D., Farley, A.J.M., Schofield, C.J.
PDB entry 9hjy: Cathepsin L3 from Ixodes ricinus (IrCL3) inhibited by E-64
Classification: HYDROLASE
Source organism: Ixodes ricinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-12-02
Authors: Schenkmayerova, A., Orsaghova, K., Benova, M., Busa, M., Mares, M.
PDB entry 9hjz: Crystal structure of human geranylgeranyl diphosphate synthase mutant Y246D
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-12-02
Authors: Yehia, R., Giladi, M., Haitin, Y.
PDB entry 9hk0: PNT domain of human ETV7
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-12-02
Authors: Valer, L., Binacchi, R., Ciribilli, Y., Biasini, E., Inga, A., Lolli, G.
PDB entry 9hk1: PD1 signaling receptor bound to FAB Complex
Classification: IMMUNOSUPPRESSANT
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2024-12-02
Authors: Bjorkelid, C., Paluch, C., Robertson, N.J.
PDB entry 9hk5: Structure of a mutant of human protein kinase CK2alpha' that equals its isoenzyme CK2alpha in affinity to the regulatory subunit CK2beta
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.491 Å
Deposited: 2024-12-03
Authors: Werner, C., Niefind, K.
PDB entry 9hke: Crystal structure of flavin-dependent monooxygenase Tet(X4) in complex with trifluoperazine
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-12-03
Authors: Smith, H.G., Beech, M.J., Allen, M.D., Farley, A.J.M., Schofield, C.J.
PDB entry 9hkf: X-Ray crystal structure of a photoswitchable HaloTag bound to JF635
Classification: BIOSYNTHETIC PROTEIN
Source organism: Rhodococcus rhodochrous
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-12-03
Authors: Weidenhausen, J., Ugarte-Uribe, B., Walterspiel, F., Mueller, C.W., Deo, C.
PDB entry 9hkg: X-ray structure of Perm2, a circularly permuted mutant of the sweet protein MNEI
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2024-12-03
Authors: Bologna, A., Wang, P.-H., Essen, L.-O., Spadaccini, R.
PDB entry 9hki: Plunge-frozen beta-galactosidase
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2024-12-03
Authors: Barrass, S.V., Esser, T.K., Mowry, N.J., Eriksson, L., Hruby, J., Seeley, L.T., Drabbels, M., Baker, L.A., Rauschenbach, S., Lorenz, U.J.
PDB entry 9hkj: Structure of Formosin D
Classification: ANTIMICROBIAL PROTEIN
Source organism: Bacillus licheniformis DSM 13 = ATCC 14580
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-12-03
Authors: Palm, G.J., Lammers, M.
PDB entry 9hkk: Structure of the malarial hexose transporter 1 (PfHT1) in complex with 2,5-anhydro-D-mannitol.
Classification: TRANSPORT PROTEIN
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2024-12-03
Authors: Ahn, D., Gulati, A., Claesson, M., Drew, D.
PDB entry 9hkl: BetP-M150E in complex with GABA in an inward-facing state
Classification: TRANSPORT PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-12-03
Authors: Urbansky, K., Fu, L., Madej, M.G., Ziegler, C.
PDB entry 9hkm: Transient activated state of BetP-M150E
Classification: TRANSPORT PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2024-12-03
Authors: Urbansky, K., Gauthier-Manuel, L., Fu, L., Madej, M.G., Ziegler, C.
PDB entry 9hko: Downregulated closed state of BetP in complex with betaine
Classification: TRANSPORT PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-03
Authors: Urbansky, K., Fu, L., Madej, M.G., Ziegler, C.
PDB entry 9hkp: Protein kinase CK2 with small molecule ligands
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2024-12-03
Authors: Krimm, I., Gelin, M., Guichou, J.F.
PDB entry 9hkq: Structure of VHH5 targeting NY-ESO-1(SLLMWITQC)/HLA-A*02:01
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Mus musculus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-04
Authors: Jie, B., Shenghai, C., Liqiang, P., Xing, Z.