LiteFold/PDB huggingface dataset:
PDB entry 9z8l: Destabilized open state sheep connexin-50 in DMPC nanodiscs at neutral pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-11-18
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9z8m: Gated state sheep connexin-46 in DMPC nanodiscs at neutral pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-11-18
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9z9b: Gated state sheep connexin-50 in DMPC nanodiscs at neutral pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-11-18
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9z9c: Crystal structure of a glyceraldehyde-3-phosphate dehydrogenase from Neisseria gonorrhoeae in complex with NAD (P1 form)
Classification: OXIDOREDUCTASE
Source organism: Neisseria gonorrhoeae NCCP11945
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-11-18
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9z9g: Stable open state sheep connexin-46 in DMPC nanodiscs at low pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-11-18
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9z9h: Stable open state sheep connexin-50 in DMPC nanodiscs at low pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-11-18
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9z9l: Q23.MD39 in Complex with Fabs from antibodies CH01 and 35O22
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2025-11-18
Authors: Lin, Z.J., Cui, J., Du, J., Habib, R., Kulp, D., Pallesen, J.
PDB entry 9z9s: Destabilized open state sheep connexin-46 in DMPC nanodiscs at low pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-11-18
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9z9w: Destabilized open state sheep connexin-50 in DMPC nanodiscs at low pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-11-18
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9z9x: Gated state sheep connexin-46 in DMPC nanodiscs at low pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2025-11-18
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9z9y: Gated state sheep connexin-50 in DMPC nanodiscs at low pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2025-11-18
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9za3: Asymmetrically gated state sheep connexin-46 in DMPC nanodiscs at low pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2025-11-19
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9za4: Asymmetrically gated state sheep connexin-50 in DMPC nanodiscs at low pH
Classification: MEMBRANE PROTEIN
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2025-11-19
Authors: Jarodsky, J.M., Myers, J.B., Reichow, S.L.
PDB entry 9zag: Crystal structure of a glyceraldehyde-3-phosphate dehydrogenase from Neisseria gonorrhoeae in complex with NAD and GLYCERALDEHYDE-3-PHOSPHATE
Classification: OXIDOREDUCTASE
Source organism: Neisseria gonorrhoeae NCCP11945
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2025-11-19
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zao: Crystal structure of a glyceraldehyde-3-phosphate dehydrogenase from Neisseria gonorrhoeae in complex with NAD (P1 form2)
Classification: OXIDOREDUCTASE
Source organism: Neisseria gonorrhoeae NCCP11945
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2025-11-19
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zav: Crystal structure of Formyl-coenzyme A transferase from Brucella melitensis in complex with succinate
Classification: TRANSFERASE
Source organism: Brucella melitensis 16M1W
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2025-11-19
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zax: Crystal structure of Phosphoglycerate mutase from Trichomonas vaginalis in complex with 3-phosphoglyceric acid
Classification: ISOMERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-11-19
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zb7: A DARPin fused to the 1TEL crystallization chaperone via a direct helical fusion
Classification: TRANSCRIPTION
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2025-11-20
Authors: Averett, J.C., Bradford, M.J., Wilson, E.W., Averett, B.J., Anderson, E., Anderson, A., Doukov, T., Moody, J.D.
PDB entry 9zbi: The cryo-EM structure of Pakpunavirus P7-1 head(capsid:decoration protein)
Classification: VIRAL PROTEIN
Source organism: Pakpunavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-11-20
Authors: Li, F., Cingolani, G.
PDB entry 9zbj: Cryo-EM structure of human apo mTORC2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-11-20
Authors: Wranik, M., Lee, J.M., Rogala, K.B.
PDB entry 9zbk: mTORC2 in complex with Akt1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-11-20
Authors: Wranik, M., Lee, J.M., Rogala, K.B.
PDB entry 9zbl: Helical Reconstruction of the Human Cardiac F-Actin-Tropomyosin Complex
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2025-11-20
Authors: Karpicheva, O., Rynkiewicz, M.J., Lehman, W., Cammarato, A.
PDB entry 9zbp: Helical Reconstruction of the Complex of Pseudo-Acetylated Human Cardiac Actin (K326/328Q) and Tropomyosin
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2025-11-21
Authors: Karpicheva, O., Rynkiewicz, M.J., Lehman, W., Cammarato, A.
PDB entry 9zbq: 1-methyl-pseudouridine L-21 ScaI Tetrahymena Ribozyme
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.3 Å
Deposited: 2025-11-21
Authors: McRae, E.K.S., Yang, H.
PDB entry 9zbr: 1-methyl-pseudouridine L-21 ScaI Tetrahymena Ribozyme - extended conformation
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2025-11-21
Authors: McRae, E.K.S., Yang, H.
PDB entry 9zbs: The cryo-EM structure of Pakpunavirus P7-1 neck (portal:H-t-T:collar:gateway)
Classification: VIRAL PROTEIN
Source organism: Pakpunavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-11-21
Authors: Li, F., Cingolani, G.
PDB entry 9zbv: Human TTR-C10A at pH 7.4
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-11-21
Authors: Schaefer, J.H., Lander, G.C.
PDB entry 9zc2: Structure of E. Coli DNA protection during starvation protein (DPS) from single particle cryoEM
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.3 Å
Deposited: 2025-11-22
Authors: Montemayor, E.J., Sibert, B.S., Parrell, D., Yang, J.E., Larson, M.R., Gaines, M., Kumar, A., Maindola, P., Cai, K., Woods, M., Wright, E.R.
PDB entry 9zc6: 5-methyl-cytidine L-21 ScaI Tetrahymena Ribozyme
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2025-11-22
Authors: McRae, E.K.S.
PDB entry 9zc7: 5-methyl-cytidine RNA origami 6-helix bundle monomer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.9 Å
Deposited: 2025-11-22
Authors: McRae, E.K.S.
PDB entry 9zc8: 5-methyl-cytidine RNA origami 6-helix bundle type-1 dimer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 12.1 Å
Deposited: 2025-11-22
Authors: McRae, E.K.S.
PDB entry 9zc9: 5-methyl-cytidine twist corrected RNA origami 6-helix bundle monomer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2025-11-22
Authors: McRae, E.K.S.
PDB entry 9zca: 5-methyl-cytidine twist corrected RNA origami 6-helix bundle type-2 dimer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.5 Å
Deposited: 2025-11-22
Authors: McRae, E.K.S., Yadav, D.K.
PDB entry 9zcb: 1-methyl-pseudouridine twist corrected RNA origami 6-helix bundle type-1 dimer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.5 Å
Deposited: 2025-11-22
Authors: McRae, E.K.S., Kumar, Y.D.
PDB entry 9zcc: 1-methyl-pseudouridine twist corrected RNA origami 6-helix bundle type-2 dimer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 12.2 Å
Deposited: 2025-11-22
Authors: McRae, E.K.S., Yadav, D.K.
PDB entry 9zcd: Flavobacterium johnsoniae 30S ribosomal subunit.
Classification: RIBOSOME
Source organism: Flavobacterium johnsoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-11-23
Authors: Ortega, J., Arpin, D.
PDB entry 9zcn: Avian TRPM8 (Parus major) fully-swapped, closed, ligand-free in the presence of calcium, structure resolved in cell vesicles
Classification: MEMBRANE PROTEIN
Source organism: Parus major
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-11-24
Authors: Choi, K.Y., Lin, X., Cheng, Y., Julius, D.
PDB entry 9zco: Avian TRPM8 (Parus major) semi-swapped, closed, ligand-free in the presence of calcium, structure resolved in cell vesicles
Classification: MEMBRANE PROTEIN
Source organism: Parus major
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2025-11-24
Authors: Choi, K.Y., Lin, X., Cheng, Y., Julius, D.
PDB entry 9zcp: Avian TRPM8 (Parus major) fully swapped closed, calcium free, in the presence of menthol, resolved in cell vesicles
Classification: TRANSPORT PROTEIN
Source organism: Parus major
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2025-11-24
Authors: Choi, K.Y., Lin, X., Cheng, Y., Julius, D.
PDB entry 9zcq: Avian TRPM8 (Parus major) semi-swapped, closed, calcium free, menthol bound structure resolved in cell vesicles
Classification: MEMBRANE PROTEIN
Source organism: Parus major
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2025-11-24
Authors: Choi, K.Y., Lin, X., Cheng, Y., Julius, D.
PDB entry 9zcr: Parus major TRPM8 with a chimeric human outer pore loops, semi-swapped, ligand-free, cold, structure resolved in GDN
Classification: MEMBRANE PROTEIN
Source organism: Parus major
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2025-11-24
Authors: Choi, K.Y., Lin, X., Cheng, Y., Julius, D.
PDB entry 9zcu: Human TRPM8 V915Y fully-swapped, closed, ligand-free structure resolved in GDN
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2025-11-24
Authors: Choi, K.Y., Lin, X., Cheng, Y., Julius, D.
PDB entry 9zcv: Human TRPM8 fully-swapped, desensitized, ligand-free structure at 4 degrees Celsius resolved in cell vesicles
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2025-11-24
Authors: Choi, K.Y., Lin, X., Cheng, Y., Julius, D.
PDB entry 9zcw: Cryo-EM structure of the engineered vector AAV2.ATX002
Classification: VIRUS
Source organism: adeno-associated virus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2025-11-24
Authors: Betegon, M., Byrne, L.C., Conway, J.F.
PDB entry 9zcz: C4 local refinement of stomatin-bound aquaporin (human)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2025-11-24
Authors: Vallese, F., Clarke, O.B.
PDB entry 9zd0: C3 local refinement of Urea Transporter B (SLC14A1) bound to human stomatin oligomer
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-11-24
Authors: Vallese, F., Clarke, O.B.
PDB entry 9zd2: C1 local refinement of aquaporin 1 bound to endogenous human stomatin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-11-24
Authors: Vallese, F., Clarke, O.B.
PDB entry 9zd5: Human Stomatin - intramembrane region
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-11-24
Authors: Vallese, F., Clarke, O.B.
PDB entry 9zd6: Bacterial interstrand DNA crosslink glycosylase AlkX/YcaQ bound to DNA
Classification: HYDROLASE/DNA
Source organism: Thermobifida fusca; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-11-24
Authors: Cai, Y., Eichman, B.F.
PDB entry 9zd7: The cryo-EM structure of Pakpunavirus P7-1 short tail fiber (gp92) bound to the extended baseplate
Classification: VIRAL PROTEIN
Source organism: Pakpunavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2025-11-25
Authors: Li, F., Cingolani, G.
PDB entry 9zd8: The cryo-EM structure of Pakpunavirus P7-1 baseplate in extended status
Classification: VIRAL PROTEIN
Source organism: Pakpunavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-11-25
Authors: Li, F., Cingolani, G.
PDB entry 9zdg: Calcium biosensor with a fluorescence-lifetime readout
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2025-11-25
Authors: Rosen, P.C.
PDB entry 9zdk: The cryo-EM structure of Pakpunavirus P7-1 triplex protein and sheath in contracted state
Classification: VIRAL PROTEIN
Source organism: Pakpunavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2025-11-25
Authors: Li, F., Cingolani, G.
PDB entry 9zdu: Crystal structure of SARS-CoV-2 RBD in complex with human Ab401 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-11-26
Authors: Fan, C., Bjorkman, P.J.
PDB entry 9zdw: Pseudomonas phage DEV delta-gp53 mutant neck and tail (portal, head-to-tail and tail tube proteins)
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage vB_PaeP_DEV
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-11-26
Authors: Bellis, N.F., Cingolani, G.
PDB entry 9zdx: Dimer of ATPase BrxC containing a Walker B mutation and bound to ATP from the Acinetobacter BREX system
Classification: ANTIMICROBIAL PROTEIN
Source organism: Acinetobacter
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2025-11-26
Authors: Doyle, L.A., Stoddard, B.L., Kaiser, B., Kaiser, A.
PDB entry 9ze0: Cryo-EM structure of the endogenous U2/branchpoint spliceosomal complex (Proximal DHX15 state)
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2025-11-26
Authors: Liu, S., Su, T., Zhou, Z.H.
PDB entry 9ze2: Cryo-EM structure of the endogenous U2/branchpoint spliceosomal complex (core)
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2025-11-27
Authors: Liu, S., Su, T., Zhou, Z.H.
PDB entry 9ze3: Cryo-EM structure of the endogenous U2/branchpoint spliceosomal complex (Distal DHX15 state)
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2025-11-27
Authors: Liu, S., Su, T., Zhou, Z.H.
PDB entry 9ze4: Asymmetric Tail Gating Complex of Pseudomonas Phage DEV
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage vB_PaeP_DEV
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.5 Å
Deposited: 2025-11-27
Authors: Bellis, N.F., Cingolani, G.
PDB entry 9zec: Cryo-EM structure of the endogenous U2/branchpoint spliceosomal complex (SF3A state 1)
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2025-11-29
Authors: Liu, S., Su, T., Zhou, Z.H.
PDB entry 9zed: Cryo-EM structure of the endogenous U2/branchpoint spliceosomal complex (SF3A state 2)
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2025-11-29
Authors: Liu, S., Su, T., Zhou, Z.H.
PDB entry 9zee: QatB-QatC complex in qatABCD anti-phage defense with ATP
Classification: ANTIVIRAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2025-11-29
Authors: Gao, A., Wassarman, D.R., Kranzusch, P.J.
PDB entry 9zef: QatB-QatC complex in qatABCD anti-phage defense
Classification: ANTIVIRAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2025-11-29
Authors: Gao, A., Wassarman, D.R., Kranzusch, P.J.
PDB entry 9zeg: The 100-K crystal structure of CYP199A4 bound to 4-phenoxybenzoic acid (dataset 1; increasing temperature series)
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.532 Å
Deposited: 2025-11-29
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 9zeh: The 150-K crystal structure of CYP199A4 bound to 4-phenoxybenzoic acid (dataset 2; increasing temperature series)
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.512 Å
Deposited: 2025-11-29
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 9zei: The 200-K crystal structure of CYP199A4 bound to 4-phenoxybenzoic acid (dataset 3; increasing temperature series)
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2025-11-30
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 9zen: Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1B2
Classification: DE NOVO PROTEIN
Source organism: artificial sequences; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2025-11-30
Authors: Chakraborty, U., Saccone, E.C., Becerra, G.C., Khan, L.F., Arslanovic, N., Aguilar, R., Gloor, S.L., Hunt, S.R., Folkwein, H.J., Husby, N.L., Maier, K.E., Marunde, M.R., Schomburg, N.K., Vaidya, A., Cowles, M.W., Venters, B.J., Kassavetis, G., Sun, Z.-W., Kadonaga, J.T., Armache, J.-P., Keogh, M.-C., Tyler, J.K.
PDB entry 9zeo: Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1G1
Classification: DE NOVO PROTEIN
Source organism: artificial sequences; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-11-30
Authors: Chakraborty, U., Saccone, E.C., Becerra, G.C., Khan, L.F., Arslanovic, N., Aguilar, R., Gloor, S.L., Hunt, S.R., Folkwein, H.J., Husby, N.L., Maier, K.E., Marunde, M.R., Schomburg, N.K., Vaidya, A., Cowles, M.W., Venters, B.J., Kassavetis, G., Sun, Z.-W., Kadonaga, J.T., Armache, J.-P., Keogh, M.-C., Tyler, J.K.
PDB entry 9zez: Avian TRPM8 (Parus major) semi-swapped, calcium free, menthol bound structure resolved in cell vesicles
Classification: TRANSPORT PROTEIN
Source organism: Parus major
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2025-12-01
Authors: Choi, K.Y., Lin, X., Cheng, Y., Julius, D.
PDB entry 9zf0: Human TRPM8 fully-swapped, ligand-free structure in the absence of calcium at 4 degrees Celsius resolved in cell vesicles
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2025-12-01
Authors: Choi, K.Y., Lin, X., Cheng, Y., Julius, D.
PDB entry 9zf4: The structure of human Vacuolar Protein Sorting 34 catalytic domain bound to RD-II-83
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2025-12-01
Authors: Litchfield, C.M., Abiodun, W.O., Peterson, M.A., Moody, J.D.
PDB entry 9zfl: Structure of an Engineered Sodium/Iodide Symporter (PF-NIS)
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2025-12-01
Authors: Llorente-Esteban, A., Sabbineni, H., Hoffsmith, K., Manville, R.W., Lopez-Gonzalez, D., Reyna-Neyra, A., Leyva, J.A., Abbott, G.W., Bianchet, M.A., Carrasco, N.
PDB entry 9zfn: Tulane virus protease without added ligands
Classification: VIRAL PROTEIN
Source organism: Tulane virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-12-01
Authors: Pham, S.H., Sankaran, B., Prasad, B.V.V.
PDB entry 9zfo: Cryo-EM Structure of Human STAT2-USP18-ISG15 Complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2025-12-01
Authors: Huynh, K.W., Yamaguchi, M.
PDB entry 9zfq: Tulane virus protease complexed with rupintrivir
Classification: VIRAL PROTEIN
Source organism: Tulane virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-12-01
Authors: Pham, S.H., Sankaran, B., Prasad, B.V.V.
PDB entry 9zg4: 5jc21/CG13250 bound to BRD4-BD1.
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2025-12-02
Authors: Hunter, D.A., Fletcher, S.
PDB entry 9zgl: Ancestrally reconstructed acetolactate synthase - Ancestor N259 with bound ThDP and magnesium.
Classification: TRANSFERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2025-12-03
Authors: Douw, A., Guddat, L.W.
PDB entry 9zh8: CryoEM structure of aldehyde dehydrogenase from Burkholderia cenocepacia at 2.33A resolution
Classification: OXIDOREDUCTASE
Source organism: Burkholderia cenocepacia
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2025-12-03
Authors: Davies, D.R., Abendroth, J., Yang, M., Edwards, T.E., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zis: C. elegans PEZO-1 Isoform G
Classification: MEMBRANE PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-12-04
Authors: Bell, B., Baker, M.L., Vasquez, V.
PDB entry 9zit: C. elegans PEZO-1 Isoform K
Classification: MEMBRANE PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-12-04
Authors: Bell, B., Baker, M.L., Vasquez, V.
PDB entry 9zjq: Human KLK3 following acylation by CDD-3290
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-12-05
Authors: Fraser, B.J., Dong, A., Wilson, R., Seitova, A., Li, Y., Jimmidi, R., Chamakuri, S., Young, D., Matzuk, M., Arrowsmith, C.H.
PDB entry 9zjr: Human sterile alpha motif domain-containing protein 9 (SAMD9), monomer
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2025-12-05
Authors: Mou, Z., Zhang, F., Dai, X., Xiang, Y.
PDB entry 9zjs: Human sterile alpha motif domain-containing protein 9 (SAMD9), asymmetric dimer ""shell"" shape
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2025-12-05
Authors: Mou, Z., Zhang, F., Dai, X., Xiang, Y.
PDB entry 9zju: Human sterile alpha motif domain-containing protein 9 (SAMD9), symmetric dimer
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-12-05
Authors: Mou, Z., Zhang, F., Dai, X., Xiang, Y.
PDB entry 9zjv: Human sterile alpha motif domain-containing protein 9 (SAMD9), asymmetric dimer ""wing"" shape
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2025-12-05
Authors: Mou, Z., Zhang, F., Dai, X., Xiang, Y.
PDB entry 9zjw: Human sterile alpha motif domain-containing protein 9 (SAMD9), loss-of-function mutant R837A
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-12-05
Authors: Mou, Z., Zhang, F., Dai, X., Xiang, Y.
PDB entry 9zjz: Human sterile alpha motif domain-containing protein 9 (SAMD9), loss-of-function mutant R685Q/G686C/I968C
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2025-12-05
Authors: Mou, Z., Zhang, F., Dai, X., Xiang, Y.
PDB entry 9zk0: Crystal structure of a calcium bound C2 domain containing protein from Trichomonas vaginalis
Classification: LIPID BINDING PROTEIN
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2025-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zk1: Crystal structure of a calcium bound C2 domain containing protein from Trichomonas vaginalis (P21 form)
Classification: LIPID BINDING PROTEIN
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2025-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zk2: Crystal structure of a calcium bound C2 domain containing protein from Trichomonas vaginalis (orthorhombic P form)
Classification: LIPID BINDING PROTEIN
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2025-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zk3: Crystal structure of a C2 domain containing protein from Trichomonas vaginalis
Classification: LIPID BINDING PROTEIN
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2025-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zk4: Crystal structure of a malonate bound C2 domain containing protein from Trichomonas vaginalis (P21 form)
Classification: LIPID BINDING PROTEIN
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zk5: Crystal structure of a calcium bound C2 domain containing protein from Trichomonas vaginalis (P61 form)
Classification: LIPID BINDING PROTEIN
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2025-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zk6: Crystal structure of a C2 domain containing protein from Trichomonas vaginalis in complex with pyrophosphate
Classification: LIPID BINDING PROTEIN
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zkf: Heme-containing Fungal Catalase
Classification: OXIDOREDUCTASE
Source organism: Aspergillus niger
Experimental method: X-RAY DIFFRACTION
Resolution: 1.821 Å
Deposited: 2025-12-06
Authors: Fernandez, D.
PDB entry 9zkg: VRK1 in complex with the inhibitor MP-60
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2025-12-06
Authors: Aroucha, J.P., Crowley-Dolen, E.K., Mitchison, T.J., Massirer, K.B., Borges, R.J.
PDB entry 9zkm: The LBD-TMD structure of native mouse AMPAR with 4 TARPs
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zkn: The TMD structure of native mouse AMPAR with 4 TARPs
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zko: The LBD-TMD structure of native mouse AMPAR with 2 TARPs 2 CNIHs
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zkp: The TMD structure of native mouse AMPAR with 2 TARPs 2 CNIHs
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zkq: The LBD-TMD structure of native mouse AMPAR with 3 TARPs 1 CNIH
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zkr: The TMD structure of native mouse AMPAR with 3 TARPs 1 CNIH
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zks: The LBD-TMD structure of native mouse AMPAR with 2 TARPs 2 CNIHs and PRRT1/SynDIG4
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zkt: The TMD structure of native mouse AMPAR with 2 TARPs 2 CNIHs and PRRT1/SynDIG4
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zku: The LBD-TMD structure of native mouse AMPAR with 3 TARPs 1 CNIH and PRRT1/SynDIG4
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zkv: The LBD-TMD structure of native mouse AMPAR with 2 TARPs
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zkw: The LBD-TMD structure of native mouse AMPAR with 3 TARPs
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2025-12-07
Authors: Fang, C.L., Gouaux, E.
PDB entry 9zld: Cryo-EM structure of hepatic amyloid fibril from a variant ATTRV122delta, single filament morphology
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-12-08
Authors: Nguyen, B.A., Ahmed, Y., Saelices, L.
PDB entry 9zlj: Crystal structure of BTK kinase domain bound to compound YS1
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-12-08
Authors: Lin, D.Y., Shamir, Y., Gaibzon, R., Rogel, A., Andreotti, A.H., London, N.
PDB entry 9zll: Complex of N-terminal BrxC walker B, BrxB, and N-termianl PglZ from the Acinetobacter BREX system
Classification: ANTIMICROBIAL PROTEIN
Source organism: Acinetobacter sp. NEB 394
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2025-12-08
Authors: Doyle, L.A., Stoddard, B.L., Kaiser, B., Kaiser, A.
PDB entry 9zlm: Crystal structure of BTK kinase domain bound to compound YS2
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2025-12-08
Authors: Lin, D.Y., Shamir, Y., Gaibzon, R., Rogel, A., Andreotti, A.H., London, N.
PDB entry 9zlo: Crystal structure of Proteus mirabilis UreE
Classification: METAL BINDING PROTEIN
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-12-09
Authors: Pan, J., Mueller, S.L., Furlong, E.J.
PDB entry 9zm0: Crystal structure of monomeric Atg23
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-12-09
Authors: Bekkhozhin, Z., Ragusa, M.J.
PDB entry 9zm4: Crystal structure of a Heat shock protein (DnaJ) from Brucella melitensis
Classification: STRUCTURAL PROTEIN
Source organism: Brucella abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2025-12-09
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zmd: Equine Serum Albumin with Copper(II)
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2025-12-10
Authors: Handing, K.B., Bijak, V., Gucwa, M., Slawek, J., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 9zmu: Crystal structure of an Iole protein from Brucella melitensis (hexagonal P form)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2025-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zmv: Crystal structure of an Iole protein from Brucella melitensis (orthorhombic P form)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zmw: Crystal structure of a Iole protein from Brucella melitensis (orthorhombic P form 2)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zmx: Crystal structure of an Iole protein from Brucella melitensis (cobalt complex)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zmy: Crystal structure of the human Commd10 HN domain in domain swapped conformation
Classification: EXOCYTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.619 Å
Deposited: 2025-12-11
Authors: Collins, B.M., Healy, M.D., Liu, M., Hall, R.
PDB entry 9zmz: Crystal structure of the human Commd4 HN domain in a domain swapped conformation
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2025-12-11
Authors: Collins, B.M., Healy, M.D., Liu, M., Hall, R.
PDB entry 9zn0: Crystal structure of the Commd10 S50E HN domain mutant in domain swapped conformation
Classification: EXOCYTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2025-12-11
Authors: Collins, B.M., Healy, M.D., Liu, M., Hall, R.
PDB entry 9zn4: Solution NMR structure of the MppE leader peptide, a Nif11 RiPP from Moorena producens
Classification: BIOSYNTHETIC PROTEIN
Source organism: Moorena producens
Experimental method: SOLUTION NMR
Deposited: 2025-12-12
Authors: Vidya, F.N.U., McShan, A.C., Agarwal, A.
PDB entry 9zn5: Hybrid model of a dimer of BrxC-BrxB fusion complexed with PglZ from the Acinetobacter BREX system
Classification: ANTIMICROBIAL PROTEIN
Source organism: Acinetobacter sp. NEB 394
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.94 Å
Deposited: 2025-12-12
Authors: Doyle, L.A., Stoddard, B.L., Kaiser, B., Kaiser, A.
PDB entry 9znb: Crystal Structure of a DARPin Fused to the 1TEL Crystallization Chaperone via a Direct Helical Fusion in a 3-Fold Crystal Form
Classification: PROTEIN BINDING
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.771 Å
Deposited: 2025-12-12
Authors: Pedroza Romo, M.J., Averett, J.C., Keliiliki, A., Wilson, E.W., Smith, C., Hansen, D., Averett, B., Gonzalez, J., Noakes, E.W., Nickles, R., Doukov, T., Moody, J.D.
PDB entry 9znf: Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriA and SriB
Classification: RIBOSOME
Source organism: Methanosarcina acetivorans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.03 Å
Deposited: 2025-12-12
Authors: Nissley, A.J., Cate, J.H.D.
PDB entry 9zng: Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriD
Classification: RIBOSOME
Source organism: Methanosarcina acetivorans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2025-12-12
Authors: Nissley, A.J., Cate, J.H.D.
PDB entry 9znh: Crystal Structure of 6,7-dimethyl-8-ribityllumazine synthase from Bordetella pertussis
Classification: TRANSFERASE
Source organism: Bordetella pertussis Tohama I
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2025-12-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zni: Cryo-EM structure of the Methanosarcina acetivorans 70S ribosome in complex with SriC and SriD
Classification: RIBOSOME
Source organism: Methanosarcina acetivorans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2025-12-12
Authors: Nissley, A.J., Cate, J.H.D.
PDB entry 9znj: Crystal Structure of 6,7-dimethyl-8-ribityllumazine synthase from Bordetella pertussis in complex with 6,7-dimethyl-8-(1'-D-ribityl) lumazine
Classification: TRANSFERASE
Source organism: Bordetella pertussis Tohama I
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-12-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9znl: X-ray structure of SARS-CoV-2 main protease covalently bound to inhibitor GRL-050-22 at 1.16 A
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2025-12-13
Authors: Mesecar, A.D., Lendy, K.E., Jayashankar, U., Bogan, S.N., Ghosh, A.K., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9znn: Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-12-14
Authors: Kirsh, J.M., Ochoa, J.M., Soroush-Pejrimovsky, M.T., Kaudeer, B.Y., Clemons, W.M.
PDB entry 9zno: Cryo-EM structure of Hydrogenivirga sp. MraY in complex with APPB
Classification: TRANSFERASE
Source organism: Hydrogenivirga sp. 128-5-R1-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2025-12-14
Authors: Kaudeer, B.Y., Clemons, W.M.
PDB entry 9zo3: X-ray structure of SARS-CoV-2 main protease covalently bound to inhibitor GRL-062-22 at 1.65 A
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-12-15
Authors: Mesecar, A.D., Lendy, E.K., Jayashankar, U., Bogan, S.N., Center for Structural Biology of Infectious Diseases (CSBID), Ghosh, A.K.
PDB entry 9zog: Crystal structure of nucleoside-diphosphate kinase Cryptosporidium parvum (Apo, hexamer)
Classification: TRANSFERASE
Source organism: Cryptosporidium parvum Iowa II
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2025-12-15
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zoi: Crystal structure of Phosphoribosylaminoimidazole carboxylase from Burkholderia xenovorans (ATP complex)
Classification: LYASE
Source organism: Paraburkholderia xenovorans LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2025-12-15
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zok: Crystal structure of Phosphoribosylaminoimidazole carboxylase from Burkholderia xenovorans (ADP complex)
Classification: LYASE
Source organism: Paraburkholderia xenovorans LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2025-12-15
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zop: OXA-23-JDB/PQ-1-219, 3 min soak
Classification: HYDROLASE/INHIBITOR
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-12-16
Authors: Smith, C.A., Maggiolo, A.M., Vakulenko, S.B., Toth, M.
PDB entry 9zoq: OXA-23-JDB/PQ-1-219, 5 min soak
Classification: HYDROLASE/INHIBITOR
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-12-16
Authors: Smith, C.A., Maggiolo, A.M., Vakulenko, S.B., Toth, M.
PDB entry 9zor: OXA-23-JDB/PQ-1-219, 10 min complex
Classification: HYDROLASE/INHIBITOR
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-12-16
Authors: Smith, C.A., Maggiolo, A.M., Vakulenko, S.B., Toth, M.
PDB entry 9zos: OXA-23-JDB/PQ-1-219, 20 min complex
Classification: HYDROLASE/INHIBITOR
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-12-16
Authors: Smith, C.A., Maggiolo, A.M., Vakulenko, S.B., Toth, M.
PDB entry 9zot: OXA-23-JDB/PQ-1-219, 30 min complex
Classification: HYDROLASE/INHIBITOR
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-12-16
Authors: Smith, C.A., Maggiolo, A.M., Vakulenko, S.B., Toth, M.
PDB entry 9zou: OXA-23-JDB/PQ-1-219, 40 min complex
Classification: HYDROLASE/INHIBITOR
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-12-16
Authors: Smith, C.A., Maggiolo, A.M., Vakulenko, S.B., Toth, M.
PDB entry 9zov: OXA-23-JDB/PQ-1-219, 60 min complex
Classification: HYDROLASE/INHIBITOR
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-12-16
Authors: Smith, C.A., Maggiolo, A.M., Vakulenko, S.B., Toth, M.
PDB entry 9zow: OXA-23-JDB/PQ-1-219, 90 min complex
Classification: HYDROLASE/INHIBITOR
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-12-16
Authors: Smith, C.A., Maggiolo, A.M., Vakulenko, S.B., Toth, M.
PDB entry 9zpb: Crystal structure of Phosphoribosylaminoimidazole carboxylase from Burkholderia xenovorans (AMP complex)
Classification: LYASE
Source organism: Paraburkholderia xenovorans LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2025-12-16
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zpc: Cryo-EM structure of human PI3KC3-C2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.83 Å
Deposited: 2025-12-16
Authors: Chen, M., Joiner, A., Hurley, J.H.
PDB entry 9zpd: Cryo-EM structure of human PI3KC3-C2 in complex with Rubicon Middle Region of C terminus
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2025-12-16
Authors: Chen, M., Ni, Q., Hurley, J.H.
PDB entry 9zpg: Crystal structure of Glutamate--tRNA ligase (GltX) from Moraxella catarrhalis (Apo)
Classification: LIGASE
Source organism: Moraxella catarrhalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2025-12-16
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zpo: Cryo-EM structure of KCa3.1_I/calmodulin channel in complex with SKA31.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2025-12-16
Authors: Nam, Y.W., Zhang, M.
PDB entry 9zpt: Cryo-EM structure of KCa3.1_II/calmodulin channel in complex with SKA31.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2025-12-17
Authors: Nam, Y.W., Ramanishka, A., Zhang, M.
PDB entry 9zpu: Crystal Structure of a Ribokinase from Brucella suis in complex with ADP
Classification: TRANSFERASE
Source organism: Brucella suis 1330
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2025-12-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9zpv: CNGA1 channel closed state in nanodisc cGMP-free
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.07 Å
Deposited: 2025-12-17
Authors: Park, T., Nimigean, C.M.
PDB entry 9zpw: CNGA1 channel intermediate state in nanodisc cGMP-bound
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2025-12-17
Authors: Park, T., Nimigean, C.M.
PDB entry 9zpx: CNGA1 channel open state in nanodisc cGMP-bound
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2025-12-17
Authors: Park, T., Nimigean, C.M.
PDB entry 9zpy: CNGA1 channel closed state in nanodisc with brain PIP2 cGMP-free
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2025-12-17
Authors: Park, T., Nimigean, C.M.
PDB entry 9zpz: CNGA1 channel intermediate state in nanodisc with brain PIP2 cGMP-bound
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2025-12-17
Authors: Park, T., Nimigean, C.M.
PDB entry 9zq0: CNGA1 channel closed state in nanodisc with diC8-PIP2 cGMP-free
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.11 Å
Deposited: 2025-12-17
Authors: Park, T., Nimigean, C.M.
PDB entry 9zq1: CNGA1 channel intermediate state in nanodisc with diC8-PIP2 cGMP-bound
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2025-12-17
Authors: Park, T., Nimigean, C.M.
PDB entry 9zq6: Structure of SpyCas9 in complex with the anti-CRISPR protein AcrIIA26
Classification: IMMUNE SYSTEM
Source organism: Streptococcus; Streptococcus pyogenes M1 GAS; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2025-12-17
Authors: Zheng, I., Learn, B., Bailey, S.