LiteFold/PDB huggingface dataset:
PDB entry 6c0j: Crystal structure of HIV-1 reverse transcriptase in complex with non-nucleoside inhibitor K-5a2
Classification: REPLICATION
Source organism: Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2018-01-01
Authors: Yang, Y., Nguyen, L.A., Smithline, Z.B., Steitz, T.A.
PDB entry 6c0k: Crystal structure of HIV-1 K103N mutant reverse transcriptase in complex with non-nucleoside inhibitor K-5a2
Classification: REPLICATION
Source organism: Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 1.958 Å
Deposited: 2018-01-01
Authors: Yang, Y., Nguyen, L.A., Smithline, Z.B., Steitz, T.A.
PDB entry 6c0l: Crystal structure of HIV-1 E138K mutant reverse transcriptase in complex with non-nucleoside inhibitor K-5a2
Classification: REPLICATION
Source organism: Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-01-01
Authors: Yang, Y., Nguyen, L.A., Smithline, Z.B., Steitz, T.A.
PDB entry 6c0m: The synthesis, biological evaluation and structural insights of unsaturated 3-N-substituted sialic acids as probes of human parainfluenza virus-3 haemagglutinin-neuraminidase
Classification: viral protein/inhibitor
Source organism: Human respirovirus 3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-01-01
Authors: Dirr, L., Ve, T., von Itzstein, M.
PDB entry 6c0n: Crystal structure of HIV-1 reverse transcriptase in complex with non-nucleoside inhibitor 25a
Classification: REPLICATION
Source organism: Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2018-01-01
Authors: Yang, Y., Nguyen, L.A., Smithline, Z.B., Steitz, T.A.
PDB entry 6c0o: Crystal structure of HIV-1 K103N mutant reverse transcriptase in complex with non-nucleoside inhibitor 25a
Classification: REPLICATION
Source organism: Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2018-01-01
Authors: Yang, Y., Nguyen, L.A., Smithline, Z.B., Steitz, T.A.
PDB entry 6c0p: Crystal structure of HIV-1 E138K mutant reverse transcriptase in complex with non-nucleoside inhibitor 25a
Classification: REPLICATION
Source organism: Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-01-01
Authors: Yang, Y., Nguyen, L.A., Smithline, Z.B., Steitz, T.A.
PDB entry 6c0r: Crystal structure of HIV-1 K103N/Y181C mutant reverse transcriptase in complex with non-nucleoside inhibitor 25a
Classification: REPLICATION
Source organism: Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.049 Å
Deposited: 2018-01-02
Authors: Yang, Y., Nguyen, L.A., Smithline, Z.B., Steitz, T.A.
PDB entry 6c0s: Factor XIA in complex with the inhibitor methyl (4-{6-[(1S)-2-[(3R)-1-acetylpiperidin-3-yl]-1-({(2E)-3-[5-chloro-2- (1H-tetrazol-1-yl)phenyl]prop-2-enoyl}amino)ethyl]-3-chloropyridazin-4-yl}phenyl) carbamate
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2018-01-02
Authors: Sheriff, S.
PDB entry 6c0t: Crystal structure of cGMP-dependent protein kinase Ialpha (PKG Ialpha) catalytic domain bound with N46
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2018-01-02
Authors: Qin, L., Sankaran, B., Kim, C.
PDB entry 6c0u: Crystal structure of cAMP-dependent protein kinase Calpha subunit bound with N46
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2018-01-02
Authors: Qin, L., Sankaran, B., Kim, C.
PDB entry 6c0v: Molecular structure of human P-glycoprotein in the ATP-bound, outward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2018-01-02
Authors: Kim, Y.J., Chen, J.
PDB entry 6c0w: Cryo-EM structure of human kinetochore protein CENP-N with the centromeric nucleosome containing CENP-A
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2018-01-02
Authors: Zhou, K., Pentakota, S., Vetter, I.R., Morgan, G.P., Petrovic, A., Musacchio, A., Luger, K.
PDB entry 6c0y: Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to duramycin
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces cinnamoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2018-01-03
Authors: Cogan, D.P., Nair, S.K.
PDB entry 6c0z: Crystal structure of Efga from Methylobacterium extorquens in complex with formaldehyde
Classification: UNKNOWN FUNCTION
Source organism: Methylobacterium extorquens DSM 13060
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-01-03
Authors: Shamoo, Y., Davlieva, M.
PDB entry 6c10: Crystal structure of mouse PCDH15 EC11-EL
Classification: membrane protein, metal transport
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.399 Å
Deposited: 2018-01-03
Authors: Gouaux, E., Elferich, J., Ge, J.
PDB entry 6c12: SDHA-SDHE complex
Classification: Oxidoreductase/Chaperon
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-01-03
Authors: Maher, M.J.
PDB entry 6c13: CryoEM structure of mouse PCDH15-4EC-LHFPL5 complex
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.33 Å
Deposited: 2018-01-03
Authors: Gouaux, E., Ge, J., Elferich, J.
PDB entry 6c14: CryoEM structure of mouse PCDH15-1EC-LHFPL5 complex
Classification: membrane protein, metal transport
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2018-01-03
Authors: Gouaux, E., Elferich, J., Ge, J.
PDB entry 6c15: CD1c in complex with phosphatidylcholine
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2018-01-03
Authors: Wun, K.S., Rossjohn, J.
PDB entry 6c16: Ubiquitin variant (UbV.Fbl10.1) bound to a human Skp1-Fbl11 fragment complex.
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.27 Å
Deposited: 2018-01-04
Authors: Manczyk, N., Sicheri, F.
PDB entry 6c17: Crystal Structure of Ketosteroid Isomerase D40N mutant from Pseudomonas Putida (pKSI) bound to 3,4-dinitrophenol
Classification: ISOMERASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2018-01-04
Authors: Yabukarski, F., Pinney, M., Herschlag, D.
PDB entry 6c18: FGFR1 kinase complex with inhibitor SN37115
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-01-04
Authors: Yosaatmadja, Y., Smaill, J.B., Squire, C.J.
PDB entry 6c19: FGFR1 kinase complex with inhibitor SN36985
Classification: Transferase/Transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2018-01-04
Authors: Yosaatmadja, Y., Smaill, J.B., Squire, C.J.
PDB entry 6c1a: MBD2 in complex with methylated DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-01-04
Authors: Liu, K., Xu, C., Tempel, W., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6c1b: FGFR1 kinase complex with inhibitor SN37118
Classification: Transferase/Transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-01-04
Authors: Yosaatmadja, Y., Smaill, J.B., Squire, C.J.
PDB entry 6c1c: FGFR1 kinase complex with inhibitor SN37116
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-01-04
Authors: Yosaatmadja, Y., Smaill, J.B., Squire, C.J.
PDB entry 6c1d: High-Resolution Cryo-EM Structures of Actin-bound Myosin States Reveal the Mechanism of Myosin Force Sensing
Classification: STRUCTURAL PROTEIN
Source organism: Amanita phalloides; Oryctolagus cuniculus; Rattus norvegicus; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2018-01-04
Authors: Mentes, A., Huehn, A., Liu, X., Zwolak, A., Dominguez, R., Shuman, H., Ostap, E.M., Sindelar, C.V.
PDB entry 6c1e: NavAb NormoPP mutant
Classification: METAL TRANSPORT
Source organism: Arcobacter butzleri (strain RM4018)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2018-01-04
Authors: Catterall, W.A., Zheng, N., Jiang, D., Gamal El-Din, T.M.
PDB entry 6c1g: High-Resolution Cryo-EM Structures of Actin-bound Myosin States Reveal the Mechanism of Myosin Force Sensing
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus; Rattus norvegicus; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2018-01-04
Authors: Mentes, A., Huehn, A., Liu, X., Zwolak, A., Dominguez, R., Shuman, H., Ostap, E.M., Sindelar, C.V.
PDB entry 6c1h: High-Resolution Cryo-EM Structures of Actin-bound Myosin States Reveal the Mechanism of Myosin Force Sensing
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus; Rattus norvegicus; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2018-01-04
Authors: Mentes, A., Huehn, A., Liu, X., Zwolak, A., Dominguez, R., Shuman, H., Ostap, E.M., Sindelar, C.V.
PDB entry 6c1i: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with T0070907
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2018-01-04
Authors: Shang, J., Fuhrmann, J., Brust, R., Kojetin, D.J.
PDB entry 6c1j: Crystal Structure of Ketosteroid Isomerase Y32F/Y57F/D40N mutant from Pseudomonas Putida (pKSI) bound to 3,4-dinitrophenol
Classification: ISOMERASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.063 Å
Deposited: 2018-01-04
Authors: Yabukarski, F., Pinney, M.M., Herschlag, D.
PDB entry 6c1k: HypoPP mutant with ligand1
Classification: METAL TRANSPORT
Source organism: Arcobacter butzleri (strain RM4018)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-01-04
Authors: Catterall, W.A., Zheng, N., Jiang, D., Gamal El-Din, T.M.
PDB entry 6c1m: NavAb NormoPP mutant
Classification: METAL TRANSPORT
Source organism: Arcobacter butzleri (strain RM4018)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.518 Å
Deposited: 2018-01-04
Authors: Catterall, W.A., Zheng, N., Jiang, D., Gamal El-Din, T.M.
PDB entry 6c1o: FGFR1 kinase domain complexed with FIIN-1
Classification: Transferase/Transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2018-01-05
Authors: Kalyukina, M., Yosaatmadja, Y., Smaill, J.B., Squire, C.J.
PDB entry 6c1p: HypoPP mutant
Classification: METAL TRANSPORT
Source organism: Arcobacter butzleri (strain RM4018)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-01-05
Authors: Catterall, W.A., Zheng, N., Jiang, D., Gamal El-Din, T.M.
PDB entry 6c1q: Crystal structure of human C5a receptor in complex with an orthosteric antagonist PMX53 and an allosteric antagonist NDT9513727
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-01-05
Authors: Liu, H., Wang, L., Wei, Z., Zhang, C.
PDB entry 6c1r: Crystal structure of human C5a receptor in complex with an orthosteric antagonist PMX53 and an allosteric antagonist avacopan
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-01-05
Authors: Liu, H., Wang, L., Wei, Z., Zhang, C.
PDB entry 6c1s: Phosphoinositide 3-Kinase gamma bound to an pyrrolopyridinone Inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2018-01-05
Authors: Jacobs, M.D., Griffin, J.P.
PDB entry 6c1t: MBD2 in complex with a partially methylated DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2018-01-05
Authors: Lei, M., Tempel, W., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6c1u: MBD2 in complex with a deoxy-oligonucleotide
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-01-05
Authors: Lei, M., Tempel, W., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6c1v: MBD2 in complex with double-stranded DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-01-05
Authors: Lei, M., Tempel, W., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6c1w: A tethered niacin-derived pincer complex with a nickel-carbon or sulfite-carbon bond in lactate racemase
Classification: ISOMERASE
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.398 Å
Deposited: 2018-01-05
Authors: Fellner, M., Desguin, B., Hausinger, R.P., Hu, J.
PDB entry 6c1x: Crystal Structure of Ketosteroid Isomerase D40N/D103N mutant from Pseudomonas Putida (pKSI) bound to 3,4-dinitrophenol
Classification: ISOMERASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2018-01-05
Authors: Yabukarski, F., Pinney, M.M., Herschlag, D.
PDB entry 6c1y: mbd of human mecp2 in complex with methylated DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-01-05
Authors: Liu, K., Bian, C., Tempel, W., Wernimont, A.K., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6c1z: Crystal structure of Apo Caenorhabditis elegans lipid binding protein 8 (LBP-8)
Classification: LIPID BINDING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2018-01-05
Authors: Tillman, M.C., Ortlund, E.A.
PDB entry 6c21: Capsid protein in the Staphylococcus aureus phage 80alpha mature capsid
Classification: VIRUS
Source organism: Staphylococcus virus 80alpha
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2018-01-05
Authors: Kizziah, J.L., Dearborn, A.D., Dokland, T.
PDB entry 6c22: Capsid protein in the Staphylococcus aureus phage 80alpha-derived SaPI1 mature capsid
Classification: VIRUS
Source organism: Staphylococcus virus 80alpha
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.4 Å
Deposited: 2018-01-05
Authors: Kizziah, J.L., Dearborn, A.D., Dokland, T.
PDB entry 6c23: Cryo-EM structure of PRC2 bound to cofactors AEBP2 and JARID2 in the Compact Active State
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2018-01-05
Authors: Kasinath, V., Faini, M., Poepsel, S., Reif, D., Feng, A., Stjepanovic, G., Aebersold, R., Nogales, E.
PDB entry 6c24: Cryo-EM structure of PRC2 bound to cofactors AEBP2 and JARID2 in the Extended Active State
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2018-01-06
Authors: Kasinath, V., Faini, M., Poepsel, S., Reif, D., Feng, A., Stjepanovic, G., Aebersold, R., Nogales, E.
PDB entry 6c25: Crystal structure of Adenylosuccinate synthetase from Legionella pneumophila Philadelphia 1 in complex with GDP
Classification: LIGASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-01-06
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6c26: The Cryo-EM structure of a eukaryotic oligosaccharyl transferase complex
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2018-01-06
Authors: Bai, L., Li, H.
PDB entry 6c27: SAM-III riboswitch ON-state
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.601 Å
Deposited: 2018-01-07
Authors: Grigg, J.C., Price, I.R., Ke, A.
PDB entry 6c28: Transcriptional repressor, CouR, bound to p-coumaroyl-CoA
Classification: DNA BINDING PROTEIN
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2018-01-07
Authors: Cogan, D.P., Nair, S.K.
PDB entry 6c29: Crystal structure of the N-terminal periplasmic domain of ScsB from Proteus mirabilis
Classification: OXIDOREDUCTASE
Source organism: Proteus mirabilis (strain HI4320)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.538 Å
Deposited: 2018-01-07
Authors: Furlong, E.J., Choudhury, H.G., Kurth, F., Martin, J.L.
PDB entry 6c2c: The molecular basis for the functional evolution of an organophosphate hydrolysing enzyme
Classification: HYDROLASE
Source organism: Pseudomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.597 Å
Deposited: 2018-01-08
Authors: Hong, N.-S., Jackson, C.J., Carr, P.D., Tokuriki, N., Baier, F., Yang, G.
PDB entry 6c2d: The crystal structure of 4-cyclohexylbenzoate-bound CYP199A4
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2018-01-08
Authors: Coleman, T., Bruning, J.B., Bell, S.G.
PDB entry 6c2f: MBD2 in complex with methylated DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2018-01-08
Authors: Liu, K., Xu, C., Tempel, W., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6c2g: Human triosephosphate isomerase mutant V231M
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-01-08
Authors: Torres, L.A., Enriquez, F.S.
PDB entry 6c2h: Crystal Structures of Cystathionine beta-Synthase from Saccharomyces cerevisiae: the Structure of the Catalytic Core
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2018-01-08
Authors: Kreinbring, C.A., Tu, Y., Liu, D., Petsko, G.A., Ringe, D.
PDB entry 6c2i: Structure of Bace-1 (Beta-Secretase) in complex with : N-(3-((1R,5S,6R)-3-amino-5-methyl-2-oxa-4-azabicyclo[4.1.0]hept-3-en-5-yl)-4-fluorophenyl)-5-methoxypyrazine-2-carboxamide
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-01-08
Authors: Sickmier, E.A.
PDB entry 6c2m: Crystal structure of HCV NS3/4A protease variant Y56H in complex with MK-5172
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.859 Å
Deposited: 2018-01-08
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6c2n: Crystal structure of HCV NS3/4A double mutant variant Y56H/D168A in complex with danoprevir
Classification: HYDROLASE
Source organism: Hepatitis C virus subtype 1a
Experimental method: X-RAY DIFFRACTION
Resolution: 1.802 Å
Deposited: 2018-01-08
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6c2o: Crystal structure of HCV NS3/4A protease variant Y56H in complex with danoprevir
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.179 Å
Deposited: 2018-01-08
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6c2q: Crystal Structures of Cystathionine beta-Synthase from Saccharomyces cerevisiae: the Structure of the PLP-L-Serine Intermediate
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2018-01-08
Authors: Kreinbring, C.A., Tu, Y., Liu, D., Petsko, G.A., Ringe, D.
PDB entry 6c2r: Aurora A ligand complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2018-01-08
Authors: Antonysamy, S., Pustilnik, A., Manglicmot, D., Froning, K., Weichert, K., Wasserman, S.
PDB entry 6c2s: Transcriptional repressor, CouR, bound to a 23-mer DNA duplex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2018-01-08
Authors: Cogan, D.P., Nair, S.K.
PDB entry 6c2t: Aurora A ligand complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2018-01-08
Authors: Antonysamy, S., Pustilnik, A., Manglicmot, D., Froning, K., Weichert, K., Wasserman, S.
PDB entry 6c2u: Solution structure of a phosphate-loop protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2018-01-09
Authors: Yang, F., Yang, W., Lin, Y.R., Romero Romero, M.L., Tawfik, D., Baker, D., Varani, G.
PDB entry 6c2v: Solution structure of a phosphate-loop protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2018-01-09
Authors: Yang, F., Yang, W., Lin, Y.R., Romero Romero, M.L., Tawfik, D., Baker, D., Varani, G.
PDB entry 6c2w: Crystal structure of human prothrombin mutant S101C/A470C
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.12 Å
Deposited: 2018-01-09
Authors: Chinnaraj, M., Chen, Z., Pelc, L., Grese, Z., Bystranowska, D., Di Cera, E., Pozzi, N.
PDB entry 6c2x: Crystal structure of Mycobacterium tuberculosis malate synthase in complex with 2-Br-6-Me-phenyldiketoacid
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-01-09
Authors: Krieger, I.V., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 6c2y: Human GRK2 in complex with Gbetagamma subunits and CCG257142
Classification: TRANSFERASE/Signaling Protein
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2018-01-09
Authors: Bouley, R., Tesmer, J.J.G.
PDB entry 6c2z: Crystal Structures of Cystathionine beta-Synthase from Saccharomyces cerevisiae: the Structure of the PLP-Aminoacrylate Intermediate
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2018-01-09
Authors: Kreinbring, C.A., Tu, Y., Liu, D., Petsko, G.A., Ringe, D.
PDB entry 6c30: Mycobacterium smegmatis RimJ (apo form)
Classification: TRANSFERASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.397 Å
Deposited: 2018-01-09
Authors: Favrot, L., Hegde, S.S., Blanchard, J.S.
PDB entry 6c31: Crystal structure of TetR family protein Rv0078 in complex with DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2018-01-09
Authors: Hsu, H.C., Li, H.
PDB entry 6c32: Mycobacterium smegmatis RimJ with AcCoA
Classification: TRANSFERASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.898 Å
Deposited: 2018-01-09
Authors: Favrot, L., Hegde, S.S., Blanchard, J.S.
PDB entry 6c33: Mycobacterium smegmatis DNA flap endonuclease
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-01-09
Authors: Shuman, S., Goldgur, Y., Carl, A., Uson, M.L.
PDB entry 6c34: Mycobacterium smegmatis DNA flap endonuclease mutant D125N
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-01-09
Authors: Shuman, S., Goldgur, Y., Carl, A., Uson, M.L.
PDB entry 6c35: Mycobacterium smegmatis flap endonuclease mutant D148N
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.803 Å
Deposited: 2018-01-09
Authors: Shuman, S., Goldgur, Y., Carl, A., Uson, M.L.
PDB entry 6c36: Mycobacterium smegmatis flap endonuclease mutant D208N
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-01-09
Authors: Shuman, S., Goldgur, Y., Carl, A., Uson, M.L.
PDB entry 6c37: Mycobacterium smegmatis RimJ in complex with CoA-disulfide
Classification: TRANSFERASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.696 Å
Deposited: 2018-01-09
Authors: Favrot, L., Hegde, S.S., Blanchard, J.S.
PDB entry 6c39: Apo crystal structure of wild-type S. aureus penicillin binding protein 4 (PBP4)
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2018-01-09
Authors: Alexander, J.A.N., Strynadka, N.C.J.
PDB entry 6c3a: O2-, PLP-dependent L-arginine hydroxylase RohP 4-hydroxy-2-ketoarginine complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2018-01-09
Authors: Hedges, J.B., Ryan, K.S.
PDB entry 6c3b: O2-, PLP-Dependent L-Arginine Hydroxylase RohP Holoenzyme
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2018-01-09
Authors: Hedges, J.B., Ryan, K.S.
PDB entry 6c3c: PLP-dependent L-arginine hydroxylase RohP quinonoid I complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces cattleya
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-01-09
Authors: Hedges, J.B., Ryan, K.S.
PDB entry 6c3d: O2-, PLP-dependent L-arginine hydroxylase RohP quinonoid II complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-01-09
Authors: Hedges, J.B., Ryan, K.S.
PDB entry 6c3e: CRYSTAL STRUCTURE OF RIP1 KINASE BOUND TO INHIBITOR
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-01-09
Authors: Saikatendu, K.S., Yoshikawa, M.
PDB entry 6c3f: AMYLOID FORMING PEPTIDE IYKVEI FROM TRANSTHYRETIN
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.499 Å
Deposited: 2018-01-09
Authors: Saelices, L., Sawaya, M.R., Eisenberg, D.S.
PDB entry 6c3g: AMYLOID FORMING PEPTIDE KALGIS FROM TRANSTHYRETIN
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.601 Å
Deposited: 2018-01-09
Authors: Saelices, L., Sawaya, M.R., Eisenberg, D.S.
PDB entry 6c3h: The crystal structure of 4-n-heptylbenzoate-bound CYP199A4
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris (strain HaA2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.705 Å
Deposited: 2018-01-09
Authors: Coleman, T., Bruning, J.B., Bell, S.G.
PDB entry 6c3i: Crystal structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter G45R mutant in an inward occluded state
Classification: TRANSPORT PROTEIN
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95013 Å
Deposited: 2018-01-09
Authors: Zimanyi, C.M., Bozzi, A.T., Gaudet, R.
PDB entry 6c3j: The crystal structure of 4-(thiophen-3-yl)benzoate-bound CYP199A4
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris (strain HaA2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2018-01-09
Authors: Coleman, T., Bruning, J.B., Bell, S.G.
PDB entry 6c3k: Apo crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (E183A, F241R)
Classification: HYDROLASE
Source organism: Staphylococcus aureus (strain COL)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-01-10
Authors: Alexander, J.A.N., Strynadka, N.C.J.
PDB entry 6c3l: Crystal structure of BCL6 BTB domain with compound 15f
Classification: protein binding/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46092 Å
Deposited: 2018-01-10
Authors: Linhares, B., Cheng, H., Cierpicki, T., Xue, F.
PDB entry 6c3m: Wild type structure of SiRHP
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-01-10
Authors: Stroupe, M.E.
PDB entry 6c3n: Crystal structure of BCL6 BTB domain in complex with compound 7CC5
Classification: TRANSCRIPTION/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53171 Å
Deposited: 2018-01-10
Authors: Linhares, B., Cheng, H., Xue, F., Cierpicki, T.
PDB entry 6c3o: Cryo-EM structure of human KATP bound to ATP and ADP in quatrefoil form
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2018-01-10
Authors: Lee, K.P.K., Chen, J., MacKinnon, R.
PDB entry 6c3p: Cryo-EM structure of human KATP bound to ATP and ADP in propeller form
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2018-01-10
Authors: Lee, K.P.K., Chen, J., MacKinnon, R.
PDB entry 6c3r: Cricket paralysis virus RNAi suppressor protein CrPV-1A
Classification: VIRAL PROTEIN
Source organism: Cricket paralysis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-01-10
Authors: Nayak, A., Kim, D.Y., Andino, R., Gross, J.
PDB entry 6c3s: AMYLOID FORMING PEPTIDE YTIAAL FROM TRANSTHYRETIN
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.602 Å
Deposited: 2018-01-10
Authors: Sievers, S.A., Sawaya, M.R., Saelices, L., Eisenberg, D.S.
PDB entry 6c3t: AMYLOID FORMING PEPTIDE AADTWE FROM TRANSTHYRETIN WITH ATTR-D38A MUTATION ASSOCIATED WITH A FAMILIAL FORM OF TRANSTHYRETIN AMYLOIDOSIS
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2018-01-10
Authors: Sievers, S.A., Sawaya, M.R., Saelices, L., Eisenberg, D.S.
PDB entry 6c3u: Crystal structure of Klebsiella pneumoniae fosfomycin resistance protein (FosAKP) with inhibitor (ANY2) bound
Classification: TRANSFERASE/INHIBITOR
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-01-10
Authors: Klontz, E.H., Sundberg, E.J.
PDB entry 6c3x: Wild type structure of SiRHP
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.542 Å
Deposited: 2018-01-11
Authors: Stroupe, M.E.
PDB entry 6c3y: Wild type structure of SiRHP
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.542 Å
Deposited: 2018-01-11
Authors: Stroupe, M.E.
PDB entry 6c3z: T477A SiRHP
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.681 Å
Deposited: 2018-01-11
Authors: Stroupe, M.E.
PDB entry 6c40: CheY41PyTyrD54K from Thermotoga maritima
Classification: SIGNALING PROTEIN
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-01-11
Authors: Merz, G.E., Muok, A.R., Crane, B.R.
PDB entry 6c41: The clavanin peptide in the presence of TFE (2,2,2-trifluoroethanol), presented a amphipathic alpha-helices from Phe-2 to Val-22 residues
Classification: ANTIMICROBIAL PROTEIN
Source organism: Styela clava
Experimental method: SOLUTION NMR
Deposited: 2018-01-11
Authors: Alves, E.S.F., Liao, L.M.
PDB entry 6c42: Estrogen Receptor Alpha Ligand Binding Domain in Complex with OP1156
Classification: trascription/transcription inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.997 Å
Deposited: 2018-01-11
Authors: Fanning, S.W., Hodges-Gallager, L., Myles, D.C., Sun, R., Fowler, C.E., Green, B.D., Harmon, C.L., Greene, G.L., Kushner, P.J.
PDB entry 6c43: 2.9 Angstrom Resolution Crystal Structure of Gamma-Aminobutyraldehyde Dehydrogenase from Salmonella typhimurium.
Classification: OXIDOREDUCTASE
Source organism: Salmonella choleraesuis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-01-11
Authors: Minasov, G., Shuvalova, L., Dubrovska, I., Winsor, J., Tekleab, H., Kwon, K., Anderson, W.F., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6c44: Zika virus capsid protein
Classification: VIRAL PROTEIN
Source organism: Zika virus
Experimental method: SOLUTION NMR
Deposited: 2018-01-11
Authors: Morando, M.A., Barbosa, G.M., Cruz-Oliveira, C., Da Poian, A.T., Almeida, F.C.L.
PDB entry 6c45: Crystal structure of human inorganic pyrophosphatase in the P212121 space group
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.388 Å
Deposited: 2018-01-11
Authors: Niu, H., Zhu, J., Huang, X., Du, Z.
PDB entry 6c46: Crystal structure of dTDP-4-dehydrorhamnose 3,5-epimerase from Elizabethkingia anophelis NUHP1
Classification: ISOMERASE
Source organism: Elizabethkingia anophelis NUHP1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-01-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6c48: Crystal structure of B-Myb-LIN9-LIN52 complex
Classification: CELL CYCLE/DNA Binding
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2018-01-11
Authors: Guiley, K.Z., Tripathi, S.M., Rubin, S.M.
PDB entry 6c49: Crystal Structure of Alcohol Dehydrogenase from Acinetobacter baumannii
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-01-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6c4a: Crystal structure of 3-nitropropionate modified isocitrate lyase from Mycobacterium tuberculosis with pyruvate
Classification: LYASE
Source organism: Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-01-11
Authors: Kreitler, D.F., Ray, S., Murkin, A.S., Gulick, A.M.
PDB entry 6c4c: Crystal structure of 3-nitropropionate modified isocitrate lyase from Mycobacterium tuberculosis with glyoxylate and pyruvate
Classification: LYASE
Source organism: Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-01-11
Authors: Kreitler, D.F., Ray, S., Murkin, A.S., Gulick, A.M.
PDB entry 6c4d: Structure based design of RIP1 kinase inhibitors
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2018-01-11
Authors: Saikatendu, K.S., Yoshikawa, M.
PDB entry 6c4g: Plasmepsin V from Plasmodium vivax bound to a transition state mimetic (WEHI-601)
Classification: HYDROLASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2018-01-11
Authors: Czabotar, P.E., Hodder, A.N., Nguyen, W., Sleebs, B.E., Boddey, J.A., Cowman, A.F.
PDB entry 6c4h: Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)
Classification: RIBOSOMAL PROTEIN/RNA
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2018-01-12
Authors: Zeng, F., Jin, H.
PDB entry 6c4i: Conformation of methylated GGQ in the peptidyl transferase center during translation termination
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2018-01-12
Authors: Zeng, F., Jin, H.
PDB entry 6c4j: Ligand bound full length hUGDH with A104L substitution
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2018-01-12
Authors: Beattie, N.R., Pioso, B.J., Wood, Z.A., Sidlo, A.M.
PDB entry 6c4k: Full length hUGDH with A104L substitution in the absence of ligand
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2018-01-12
Authors: Beattie, N.R., Pioso, B.J., Wood, Z.A.
PDB entry 6c4l: Yersinopine dehydrogenase (YpODH) - Apo
Classification: OXIDOREDUCTASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-01-12
Authors: McFarlane, J.S., Davis, C.L., Lamb, A.L.
PDB entry 6c4m: Yersinopine dehydrogenase (YpODH) - NADP+ bound
Classification: OXIDOREDUCTASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2018-01-12
Authors: McFarlane, J.S., Davis, C.L., Lamb, A.L.
PDB entry 6c4n: Pseudopaline dehydrogenase (PaODH) - NADP+ bound
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-01-12
Authors: McFarlane, J.S., Davis, C.L., Lamb, A.L.
PDB entry 6c4o: AMYLOID FORMING PEPTIDE TIAALLS FROM TRANSTHYRETIN
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2018-01-12
Authors: Sievers, S.A., Sawaya, M.R., Saelices, L., Eisenberg, D.S.
PDB entry 6c4p: Crystal Structures of Cystathionine beta-Synthase from Saccharomyces cerevisiae: the Structure of the PMP Complex
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-01-12
Authors: Kreinbring, C.A., Tu, Y., Liu, D., Berkowitz, D.B., Petsko, G.A., Ringe, D.
PDB entry 6c4q: 1.16 Angstrom Resolution Crystal Structure of Acyl Carrier Protein Domain (residues 1-100) of Polyketide Synthase Pks13 from Mycobacterium tuberculosis
Classification: TRANSPORT PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2018-01-12
Authors: Minasov, G., Shuvalova, L., Dubrovska, I., Kiryukhina, O., Grimshaw, S., Kwon, K., Anderson, W.F., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6c4r: Staphylopine dehydrogenase (SaODH) - Apo
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.288 Å
Deposited: 2018-01-12
Authors: McFarlane, J.S., Davis, C.L., Lamb, A.L.
PDB entry 6c4s: Human cSrc SH3 Domain in complex with Choline Kinase fragment 60-69
Classification: TRANSFERASE, PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-01-12
Authors: Kall, S.L., Lavie, A.
PDB entry 6c4t: Staphylopine dehydrogenase (SaODH) - NADP+ bound
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2018-01-12
Authors: McFarlane, J.S., Davis, C.L., Lamb, A.L.
PDB entry 6c4u: Engineered FHA with Myc-pTBD peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-01-12
Authors: Kall, S.L., Lavie, A.
PDB entry 6c4v: 1.9 Angstrom Resolution Crystal Structure of Acyl Carrier Protein Domain (residues 1350-1461) of Polyketide Synthase Pks13 from Mycobacterium tuberculosis
Classification: TRANSPORT PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-01-12
Authors: Minasov, G., Brunzelle, J.S., Shuvalova, L., Dubrovska, I., Kiryukhina, O., Grimshaw, S., Kwon, K., Anderson, W.F., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6c4w: Structure of the yeast Pichia membranifaciens cytochrome c
Classification: OXIDOREDUCTASE
Source organism: Pichia membranifaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-01-13
Authors: McPherson, A.
PDB entry 6c4x: Cross-alpha Amyloid-like Structure alphaAmmem
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2018-01-13
Authors: Liu, L., Zhang, S.Q.
PDB entry 6c4y: Cross-alpha Amyloid-like Structure alphaAmG
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-01-13
Authors: Liu, L., Zhang, S.Q.
PDB entry 6c4z: Cross-alpha Amyloid-like Structure alphaAmG - low resolution
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2018-01-13
Authors: Liu, L., Zhang, S.Q.
PDB entry 6c50: Cross-alpha Amyloid-like Structure alphaAmS
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.503 Å
Deposited: 2018-01-13
Authors: Liu, L., Zhang, S.Q.
PDB entry 6c51: Cross-alpha Amyloid-like Structure alphaAmL
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-01-13
Authors: Liu, L., Zhang, S.Q.
PDB entry 6c52: Cross-alpha Amyloid-like Structure alphaTet
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-01-13
Authors: Liu, L., Zhang, S.Q.
PDB entry 6c53: Cryo-EM structure of the Type 1 pilus rod
Classification: PROTEIN FIBRIL
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2018-01-13
Authors: Zheng, W., Wang, F., Luna-Rico, A., Francetic, O., Hultgren, S.J., Egelman, E.H.
PDB entry 6c54: Ebola nucleoprotein nucleocapsid-like assembly and the asymmetric unit
Classification: RNA BINDING PROTEIN
Source organism: Zaire ebolavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.8 Å
Deposited: 2018-01-13
Authors: Su, Z., Wu, C., Pintilie, G.D., Chiu, W., Amarasinghe, G.K., Leung, D.W.
PDB entry 6c55: Crystal structure of Staphylococcus aureus Ketol-acid Reductosimerrase with hydroxyoxamate inhibitor 3
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus (strain bovine RF122 / ET3-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2018-01-14
Authors: Kandale, A., Patel, K.M., Zheng, S., You, L., Guddat, L.W., Schenk, G., Schmbri, M., McGeary, R.P.
PDB entry 6c56: Crystal structure of mutant human geranylgeranyl pyrophosphate synthase (Y246D) in its Apo form
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-01-15
Authors: Park, J., Ta, V., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 6c57: Crystal structure of mutant human geranylgeranyl pyrophosphate synthase (Y246D) in complex with bisphosphonate inhibitor FV0109
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-01-15
Authors: Park, J., Bin, X., Vincent, F., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 6c58: Human UDP-Glucose Dehydrogenase A225L substitutuion with UDP-xylose bound
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2018-01-15
Authors: Gross, P.G., Fallah, J., Wood, Z.A.
PDB entry 6c59: Chimeric Pol kappa RIR Rev1 C-terminal domain
Classification: REPLICATION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2018-01-15
Authors: Wojtaszek, J.L., Zhou, P.
PDB entry 6c5a: Human UDP-Glucose Dehydrogenase with UDP- Glc and NADH bound
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-01-15
Authors: Gross, P.G., Fallah, J., Wood, Z.A.
PDB entry 6c5b: Crystal Structure Analysis of LaPhzM
Classification: TRANSFERASE
Source organism: Lysobacter antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2018-01-15
Authors: Beltran, D.G., Schacht, A., Zhang, L.
PDB entry 6c5c: Crystal structure of the 3-dehydroquinate synthase (DHQS) domain of Aro1 from Candida albicans SC5314 in complex with NADH
Classification: LYASE
Source organism: Candida albicans (strain SC5314 / ATCC MYA-2876)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-01-16
Authors: Michalska, K., Evdokimova, E., Di Leo, R., Stogios, P.J., Savchenko, A., Joachimiak, A., Satchell, K., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6c5d: N-terminal domain of Helicobacter pylori LlaJI.R1
Classification: DNA BINDING PROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2018-01-16
Authors: Hosford, C.J., Chappie, J.S.
PDB entry 6c5f: Human D-Dopachrome tautomerase (D-DT)/ macrophage migration inhibitory factor 2 (MIF2) complexed with the selective inhibitor 4-CPPC
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2018-01-16
Authors: Pantouris, G., Lolis, E.J.
PDB entry 6c5h: S25-5 Fab in complex with Chlamydiaceae-specific LPS antigen
Classification: IMMUNE SYSTEM, SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2018-01-16
Authors: Evans, S.V., Haji-Ghassemi, O.
PDB entry 6c5i: Unliganded S25-5 Fab
Classification: SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2018-01-16
Authors: Evans, S.V., Haji-Ghassemi, O.
PDB entry 6c5j: S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 1)
Classification: IMMUNE SYSTEM, SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2018-01-16
Authors: Haji-Ghassemi, O., Evans, S.V.
PDB entry 6c5k: S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 2)
Classification: SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-01-16
Authors: Haji-Ghassemi, O., Evans, S.V.
PDB entry 6c5l: Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-01-16
Authors: Zeng, F., Jin, H.
PDB entry 6c5m: Structure of glycolipid aGSA[8,9] in complex with mouse CD1d
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2018-01-16
Authors: Zajonc, D.M., Wang, J.