LiteFold/PDB huggingface dataset:
PDB entry 8oyh: X-ray structure of furin (PCSK3) in complex with Guanidinomethyl-Phac-Can-Tle-Can-6-(aminomethyl)-3-amino-isoindol
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-05-04
Authors: Dahms, S.O., Brandstetter, H.
PDB entry 8oyi: particulate methane monooxygenase with 2,2,2-trifluoroethanol bound
Classification: OXIDOREDUCTASE
Source organism: Methylococcus capsulatus str. Bath
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2023-05-04
Authors: Tucci, F.J., Rosenzweig, A.C.
PDB entry 8oyk: Coiled-Coil Domain of Human STIL, L736E Mutant
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-05
Authors: Martin, F.J.O., Shamir, M., Woolfson, D.N., Friedler, A.
PDB entry 8oyl: Coiled-Coil Domain of Human STIL, Q729L Mutant
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-05-05
Authors: Martin, F.J.O., Shamir, M., Woolfson, D.N., Friedler, A.
PDB entry 8oyp: Crystal structure of Ubiquitin specific protease 11 (USP11) in complex with a substrate mimetic
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2023-05-05
Authors: Maurer, S.K., Caulton, S.G., Ward, S.J., Emsley, J., Dreveny, I.
PDB entry 8oyq: Structure of the Histidine Kinase CheA ATP-Binding domain in complex with compound ODDHK13
Classification: SIGNALING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-05-05
Authors: Adhav, A., Marina, A.
PDB entry 8oyr: DNA Major Groove Binding by lambda-[Ru(phen)2(phi)]2+
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2023-05-05
Authors: Prieto-Otoya, T.D., Cardin, C.J., McQuaid, K.T., Paterson, N.G.
PDB entry 8oys: De novo designed TIM barrel fold TBF_24
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2023-05-05
Authors: Pacesa, M., Correia, B.E.
PDB entry 8oyt: Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '3 up' RBD conformation
Classification: VIRAL PROTEIN
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-05-05
Authors: Weckener, M., Naismith, J.H., Owens, R.J.
PDB entry 8oyu: Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-05-05
Authors: Weckener, M., Naismith, J.H., Owens, R.J.
PDB entry 8oyv: De novo designed Claudin fold CLF_4
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2023-05-05
Authors: Pacesa, M., Correia, B.E.
PDB entry 8oyw: De novo designed rhomboid protease-like fold RPF_9
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-05-05
Authors: Pacesa, M., Correia, B.E.
PDB entry 8oyx: De novo designed soluble GPCR-like fold GLF_18
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2023-05-05
Authors: Pacesa, M., Correia, B.E.
PDB entry 8oyy: De novo designed soluble GPCR-like fold GLF_32
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-05
Authors: Pacesa, M., Correia, B.E.
PDB entry 8oyz: Structure of the Histidine Kinase CheA ATP-Binding domain in complex with compound ODDHK10
Classification: SIGNALING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-05
Authors: Adhav, A., Marina, A.
PDB entry 8oz0: Structure of a human 48S translation initiation complex with eIF4F and eIF4A
Classification: TRANSLATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-05-06
Authors: Brito Querido, J., Sokabe, M., Diaz-Lopez, I., Gordiyenko, Y., Fraser, C.S., Ramakrishnan, V.
PDB entry 8oz1: CjCel5D endo-xyloglucanase bounc to CB665 covalent inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus Ueda107
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-05-06
Authors: McGregor, N.G.S., de Boer, C., Overkleeft, H.S., Davies, G.J.
PDB entry 8oz2: Human Aldose Reductase Mutant A299G/L300A in Complex with a Ligand with an IDD Structure ({5-fluoro-2-[(3-nitrobenzyl)carbamoyl]phenoxy}acetic acid)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2023-05-08
Authors: Klee, L.-S., Heine, A., Klebe, G.
PDB entry 8oz3: Crystal structure of scFv ATOR 1017 bound to human 4-1BB
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-05-08
Authors: Hakansson, M., Von Schantz, L., Rose, N.
PDB entry 8oz4: Populus tremula stable protein 1 with an alternate crystal lattice
Classification: PLANT PROTEIN
Source organism: Populus tremula
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-05-08
Authors: Sklyar, J., Zeibaq, Y., Bachar, O., Yehezkeli, O., Adir, N.
PDB entry 8oz5: Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with substrate analog/inhibitor, 2-CN-benzoyl-CoA
Classification: FLAVOPROTEIN
Source organism: Thauera chlorobenzoica
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.04 Å
Deposited: 2023-05-08
Authors: Kayastha, K., Ermler, U.
PDB entry 8oz6: cryoEM structure of SPARTA complex ligand-free
Classification: ANTIVIRAL PROTEIN
Source organism: Maribacter polysiphoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.97 Å
Deposited: 2023-05-08
Authors: Babatunde, E., Dong, C.N., Xu, H.L., Henning, S.
PDB entry 8oz7: Abortive infection DNA polymerase AbiA from Lactococcus lactis
Classification: ANTIVIRAL PROTEIN
Source organism: Lactococcus lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-05-08
Authors: Gapinska, M.A., Nowotny, M.
PDB entry 8oz8: Crystal Structure of an Hydroxynitrile lyase variant (H96A) from Granulicella tundricola
Classification: LYASE
Source organism: Granulicella tundricola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-08
Authors: Bento, I., Coloma, J., Hagedoorn, P.-L., Hanefeld, U.
PDB entry 8oz9: Structure of the Histidine Kinase CheA ATP-Binding domain in complex with compound QUI-SV-383
Classification: SIGNALING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-05-08
Authors: Adhav, A., Marina, A.
PDB entry 8oza: Human cathepsin L in complex with covalently bound CA-074 methyl ester
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-05-08
Authors: Falke, S., Lieske, J., Guenther, S., Ewert, W., Reinke, P.Y.A., Loboda, J., Karnicar, K., Usenik, A., Lindic, N., Sekirnik, A., Chapman, H.N., Hinrichs, W., Turk, D., Meents, A.
PDB entry 8ozb: Crystal structure of Nup35-Nb complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2023-05-08
Authors: Srinivasan, V.
PDB entry 8ozc: cryoEM structure of SPARTA complex heterodimer apo
Classification: DNA BINDING PROTEIN
Source organism: Maribacter polysiphoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-05-09
Authors: Ekundayo, B., Ni, D.C., Lu, X.H., Stahlberg, H.
PDB entry 8ozd: cryoEM structure of SPARTA complex dimer-3
Classification: DNA BINDING PROTEIN
Source organism: Maribacter polysiphoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2023-05-09
Authors: Ekundayo, B., Ni, D.C., Lu, X.H., Stahlberg, H.
PDB entry 8oze: cryoEM structure of SPARTA complex dimer high resolution
Classification: IMMUNE SYSTEM
Source organism: Maribacter polysiphoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2023-05-09
Authors: Babatunde, E., Dong, C.N., Xu, H.L., Henning, S.
PDB entry 8ozf: cryoEM structure of SPARTA complex Tetramer Post-NAD cleavage-2
Classification: ANTIVIRAL PROTEIN
Source organism: Maribacter polysiphoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2023-05-09
Authors: Babatunde, E., Dong, C.N., Xu, H.L., Henning, S.
PDB entry 8ozg: cryoEM structure of SPARTA complex Tetramer Post-NAD cleavage-1
Classification: IMMUNE SYSTEM
Source organism: Maribacter polysiphoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2023-05-09
Authors: Babatunde, E., Dong, C.N., Xu, H.L., Henning, S.
PDB entry 8ozh: In situ cryoEM structure of Prototype Foamy Virus Env trimer
Classification: VIRAL PROTEIN
Source organism: Eastern chimpanzee simian foamy virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2023-05-09
Authors: Calcraft, T., Nans, A., Rosenthal, P.B.
PDB entry 8ozi: cryoEM structure of SPARTA complex pre-NAD cleavage
Classification: IMMUNE SYSTEM
Source organism: Maribacter polysiphoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-05-09
Authors: Babatunde, E., Dong, C.N., Xu, H.L., Henning, S.
PDB entry 8ozj: In situ cryoEM structure of Prototype Foamy Virus Env dimer of trimers
Classification: VIRAL PROTEIN
Source organism: Eastern chimpanzee simian foamy virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-05-09
Authors: Calcraft, T., Nans, A., Rosenthal, P.B.
PDB entry 8ozk: In situ cryoEM structure of the Prototype Foamy Virus capsid, icosahedral map
Classification: VIRAL PROTEIN
Source organism: Eastern chimpanzee simian foamy virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2023-05-09
Authors: Calcraft, T., Nans, A., Rosenthal, P.B.
PDB entry 8ozl: In situ cryoEM structure of the Prototype Foamy Virus capsid, pentamer localised reconstruction
Classification: VIRAL PROTEIN
Source organism: Eastern chimpanzee simian foamy virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-09
Authors: Calcraft, T., Nans, A., Rosenthal, P.B.
PDB entry 8ozm: In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 1 localised reconstruction
Classification: VIRAL PROTEIN
Source organism: Eastern chimpanzee simian foamy virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-09
Authors: Calcraft, T., Nans, A., Rosenthal, P.B.
PDB entry 8ozn: In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 2 localised reconstruction
Classification: VIRAL PROTEIN
Source organism: Eastern chimpanzee simian foamy virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-05-09
Authors: Calcraft, T., Nans, A., Rosenthal, P.B.
PDB entry 8ozo: Populus tremula stable protein 1 with N-terminal binding peptide extension
Classification: PLANT PROTEIN
Source organism: Populus tremula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-09
Authors: Sklyar, J., Zeibaq, Y., Bachar, O., Yehezkeli, O., Adir, N.
PDB entry 8ozp: In situ subtomogram average of Prototype Foamy Virus Env pentamer of trimers
Classification: VIRAL PROTEIN
Source organism: Eastern chimpanzee simian foamy virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.9 Å
Deposited: 2023-05-09
Authors: Calcraft, T., Nans, A., Rosenthal, P.B.
PDB entry 8ozq: In situ subtomogram average of Prototype Foamy Virus Env hexamer of trimers
Classification: VIRAL PROTEIN
Source organism: Eastern chimpanzee simian foamy virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 10 Å
Deposited: 2023-05-09
Authors: Calcraft, T., Nans, A., Rosenthal, P.B.
PDB entry 8ozs: Populus tremula stable protein 1 with N-terminal binding peptide extension with hemin
Classification: PLANT PROTEIN
Source organism: Populus tremula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-09
Authors: Sklyar, J., Zeibaq, Y., Bachar, O., Yehezkeli, O., Adir, N.
PDB entry 8ozt: Crystal Structure of Fucosidase B
Classification: SUGAR BINDING PROTEIN
Source organism: Lactobacillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2023-05-09
Authors: Gallego del Sol, F., Marina, A.
PDB entry 8ozu: Fucosidase crystal structure
Classification: SUGAR BINDING PROTEIN
Source organism: Lacticaseibacillus casei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-05-09
Authors: Gallego del Sol, F., Marina, A.
PDB entry 8ozv: Imine Reductase from Ajellomyces dermatitidis in complex with 2,2-difluoroacetophenone
Classification: OXIDOREDUCTASE
Source organism: Blastomyces dermatitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2023-05-09
Authors: Sharma, M., Grogan, G.
PDB entry 8ozw: Imine Reductase from Ajellomyces dermatitidis in complex NADPH4
Classification: OXIDOREDUCTASE
Source organism: Blastomyces dermatitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-05-09
Authors: Sharma, M., Grogan, G.
PDB entry 8ozz: PH domain of AKT-like kinase in Trypanosoma cruzi
Classification: LIPID BINDING PROTEIN
Source organism: Trypanosoma cruzi
Experimental method: SOLUTION NMR
Deposited: 2023-05-09
Authors: Stadler, K.A., Ortiz-Joya, L.J., Zangger, K., Gubensaek, N.
PDB entry 8p00: Cryo-EM structure of Rotavirus B NSP2
Classification: VIRAL PROTEIN
Source organism: Human rotavirus B strain CAL-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-05-09
Authors: Chamera, S., Nowotny, M.
PDB entry 8p01: Crystal structure of human STING ectodomain in complex with BI 7446, a potent cyclic dinucleotide STING agonist with broad-spectrum variant activity for the treatment of cancer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.094 Å
Deposited: 2023-05-09
Authors: Nar, H.
PDB entry 8p02: Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with product, benzoyl-CoA
Classification: FLAVOPROTEIN
Source organism: Thauera chlorobenzoica
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-05-09
Authors: Kayastha, K., Ermler, U.
PDB entry 8p03: 48S late-stage initiation complex with m6A mRNA
Classification: TRANSLATION
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-05-09
Authors: Guca, E., Lima, L.H.F., Boissier, F., Hashem, Y.
PDB entry 8p04: Crystal structure of human CLK1 in complex with Leucettinib-92
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-05-09
Authors: Kraemer, A., Schroeder, M., Meijer, L., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8p05: Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with Leucettinib-92
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-05-09
Authors: Kraemer, A., Meijer, L., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8p06: Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((2-(4H-1,2,4-triazol-4-yl)pyridin-4-yl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-09
Authors: Kraemer, A., Ong, H.W., Yang, X., Brown, J.W., Chang, E., Willson, T., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8p07: Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((3-(4H-1,2,4-triazol-4-yl)phenyl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-09
Authors: Kraemer, A., Ong, H.W., Yang, X., Bown, J.W., Chang, E., Willson, T., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8p08: Crystal structure of human CLK1 in complex with Leucettinib-21
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-09
Authors: Kraemer, A., Schroeder, M., Meijer, L., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8p09: 48S late-stage initiation complex with non methylated mRNA
Classification: TRANSLATION
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-09
Authors: Guca, E., Lima, L.H.F., Boissier, F., Hashem, Y.
PDB entry 8p0a: Human Cohesin ATPase module
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2023-05-10
Authors: Landwerlin, P., Durand, A., Diebold-Durand, M.-L., Romier, C.
PDB entry 8p0b: Thogoto virus polymerase in Mode B conformation and bound to 32-mer loop promoter RNA
Classification: VIRAL PROTEIN
Source organism: Thogotovirus thogotoense; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-05-10
Authors: Cusack, S., Kouba, T.
PDB entry 8p0c: Rubella virus p150 macro domain (apo)
Classification: HYDROLASE
Source organism: Rubella virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-05-10
Authors: Stoll, G.A., Modis, Y.
PDB entry 8p0d: Human 14-3-3 sigma in complex with human MDM2 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2023-05-10
Authors: Roversi, P., Ward, J., Doveston, R., Kwon, H., Romartinez Alonso, B.
PDB entry 8p0e: Rubella virus p150 macro domain in complex with ADP-ribose
Classification: HYDROLASE
Source organism: Rubella virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2023-05-10
Authors: Stoll, G.A., Modis, Y.
PDB entry 8p0f: Crystal structure of the VCB complex with compound 1.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-05-10
Authors: Bader, G., Boettcher, J., Wolkerstorfer, B.
PDB entry 8p0g: Thogoto virus polymerase in Mode A conformation and bound to 35-mer loop promoter RNA
Classification: VIRAL PROTEIN
Source organism: Thogotovirus thogotoense; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-05-10
Authors: Cusack, S., Kouba, T.
PDB entry 8p0i: Crystal structure of the open conformation of insulin-regulated aminopeptidase in complex with a small-MW inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-05-10
Authors: Mpakali, A., Giastas, P., Stratikos, E.
PDB entry 8p0j: Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex
Classification: TRANSCRIPTION
Source organism: Vaccinia virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2023-05-10
Authors: Grimm, C., Jungwirth, S., Fischer, U.
PDB entry 8p0k: Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex, module 2 of capping enzyme mobile
Classification: TRANSCRIPTION
Source organism: Vaccinia virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-05-10
Authors: Grimm, C., Jungwirth, S., Fischer, U.
PDB entry 8p0l: Crystal structure of human O-GlcNAcase in complex with an S-linked CKII peptide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-10
Authors: Males, A., Davies, G.J., Calvelo, M., Alteen, M.G., Vocadlo, D.J., Rovira, C.
PDB entry 8p0m: Crystal structure of TEAD3 in complex with IAG933
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.961 Å
Deposited: 2023-05-10
Authors: Scheufler, C., Villard, F., Chau, S.
PDB entry 8p0n: Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex shallow conformation
Classification: TRANSCRIPTION
Source organism: Vaccinia virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2023-05-10
Authors: Grimm, C., Jungwirth, S., Fischer, U.
PDB entry 8p0o: Crystal structure of AaNGT complexed to UDP-Gal
Classification: TRANSFERASE
Source organism: Aggregatibacter aphrophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-05-10
Authors: Pinello, B., Macias-Leon, J., Rovira, C., Hurtado-Guerrero, R.
PDB entry 8p0p: Crystal structure of AaNGT complexed to UDP-2F-Glucose
Classification: TRANSFERASE
Source organism: Aggregatibacter aphrophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2023-05-10
Authors: Piniello, B., Macias-Leon, J., Rovira, C., Hurtado-Guerrero, R.
PDB entry 8p0q: Crystal structure of AaNGT complexed to UDP and a peptide
Classification: TRANSFERASE
Source organism: Aggregatibacter aphrophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-05-10
Authors: Piniello, B., Macias-Leon, J., Rovira, C., Hurtado-Guerrero, R.
PDB entry 8p0s: Crystal structure HR1 domain of Rho-associated coiled-coil protein kinases (ROCK-HR1)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-05-10
Authors: Dubey, B.N., Dvorsky, R., Gremer, L., Vetter, I.R., Schmitt, L., Groth, G., Ahmadian, M.R.
PDB entry 8p0t: CryoEM structure of 20S Trichomonas vaginalis proteasome in complex with proteasome inhibitor CP-17
Classification: HYDROLASE
Source organism: Trichomonas vaginalis G3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2023-05-10
Authors: Silhan, J., Boura, E., Fajtova, P.
PDB entry 8p0u: Thogoto virus polymerase in Mode B conformation with defined endonuclease domain and bound to 32-mer loop promoter RNA
Classification: VIRAL PROTEIN
Source organism: Thogotovirus thogotoense; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-05-10
Authors: Cusack, S., Kouba, T.
PDB entry 8p0v: Structure of the human Commander complex coiled coils, DENND10 and partial Retriever subcomplex
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2023-05-10
Authors: Kumpula, E.P., Laulumaa, S., Huiskonen, J.T.
PDB entry 8p0w: Structure of the human Commander complex COMMD ring
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-11
Authors: Kumpula, E.P., Laulumaa, S., Huiskonen, J.T.
PDB entry 8p0x: Structure of the human Commander complex Retriever Subcomplex
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2023-05-11
Authors: Kumpula, E.P., Laulumaa, S., Huiskonen, J.T.
PDB entry 8p0y: The crystal structure of the C-terminal domain of Mengla nucleoprotein
Classification: VIRAL PROTEIN
Source organism: Mengla dianlovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.12 Å
Deposited: 2023-05-11
Authors: Ferrero, D.S., Tomas Gilabert, O., Verdaguer, N.
PDB entry 8p0z: AP01-S2.3 - a variant of a redesigned transferrin receptor apical domain
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-05-11
Authors: Oberdorfer, G., Grill, B., Bjelic, S., Stoll, D.
PDB entry 8p10: The crystal structure of the C-terminal domain of Mengla nucleoprotein
Classification: VIRAL PROTEIN
Source organism: Mengla dianlovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.26 Å
Deposited: 2023-05-11
Authors: Ferrero, D.S., Tomas Gilabert, O., Verdaguer, N.
PDB entry 8p11: X-ray structure of acetylcholine-binding protein (AChBP) in complex with FL003044.
Classification: CHOLINE-BINDING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-11
Authors: Cederfelt, D., Boronat, P., Dobritzsch, D., Hennig, S., Fitzgerald, E.A., de Esch, I.J.P., Danielson, U.H.
PDB entry 8p12: Cryo-EM structure of Rhodopsin-Gi bound to antibody fragment Fab13
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2023-05-11
Authors: Pamula, F., Tejero, O., Muehle, J., Thoma, R., Schertler, G.F.X., Marino, J., Tsai, C.-J.
PDB entry 8p13: Cryo-EM structure of Rhodopsin-Gi bound with antibody fragments scFv16 and Fab79, conformation 1
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2023-05-11
Authors: Pamula, F., Tejero, O., Muehle, J., Thoma, R., Schertler, G.F.X., Marino, J., Tsai, C.-J.
PDB entry 8p14: USP28 USP domain in complex with Vismodegib
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2023-05-11
Authors: Sauer, F., Karal Nair, R., Kisker, C.
PDB entry 8p15: Cryo-EM structure of Rhodopsin-Gi bound with antibody fragments scFv16 and Fab79, conformation 2
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.9 Å
Deposited: 2023-05-11
Authors: Pamula, F., Tejero, O., Muehle, J., Thoma, R., Schertler, G.F.X., Marino, J., Tsai, C.-J.
PDB entry 8p16: E167K RF2 on E. coli 70S release complex with UGG (Structure I)
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2023-05-11
Authors: Pundir, S., Larsson, D.S.D., Selmer, M., Sanyal, S.
PDB entry 8p17: E167K RF2 on E. coli 70S release complex with UGG (Structure II)
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2023-05-11
Authors: Pundir, S., Larsson, D.S.D., Selmer, M., Sanyal, S.
PDB entry 8p18: E167K RF2 on E. coli 70S release complex with UGG (Structure III)
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2023-05-11
Authors: Pundir, S., Larsson, D.S.D., Selmer, M., Sanyal, S.
PDB entry 8p19: USP28 USP domain apo
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-05-11
Authors: Sauer, F., Karal Nair, R., Kisker, C.
PDB entry 8p1a: Lysozyme structure solved from serial crystallography data collected at 2 kHz for 5 seconds with JUNGFRAU detector at MAXIV
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-05-11
Authors: Nan, J., Leonarski, F., Furrer, A., Dworkowski, F.
PDB entry 8p1b: Lysozyme structure solved from serial crystallography data collected at 2 kHz with JUNGFRAU detector at MAXIV
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-05-11
Authors: Nan, J., Leonarski, F., Furrer, A., Dworkowski, F.
PDB entry 8p1c: Lysozyme structure solved from serial crystallography data collected at 1 kHz with JUNGFRAU detector at MAXIV
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2023-05-11
Authors: Nan, J., Leonarski, F., Furrer, A., Dworkowski, F.
PDB entry 8p1d: Lysozyme structure solved from serial crystallography data collected at 100 Hz with JUNGFRAU detector at MAXIV
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-05-11
Authors: Nan, J., Leonarski, F., Furrer, A., Dworkowski, F.
PDB entry 8p1e: X-ray structure of acetylcholine-binding protein (AChBP) in complex with FL001613.
Classification: CHOLINE-BINDING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-05-11
Authors: Cederfelt, D., Boronat, P., Dobritzsch, D., Hennig, S., Fitzgerald, E.A., de Esch, I.J.P., Danielson, U.H.
PDB entry 8p1f: X-ray structure of acetylcholine-binding protein (AChBP) in complex with FL001909.
Classification: CHOLINE-BINDING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-05-12
Authors: Cederfelt, D., Boronat, P., Dobritzsch, D., Hennig, S., Fitzgerald, E.A., de Esch, I.J.P., Danielson, U.H.
PDB entry 8p1g: Crystal structure of inactive TtCE16 in complex with acetate
Classification: HYDROLASE
Source organism: Thermothelomyces thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-05-12
Authors: Dimarogona, M., Kosinas, C., Pentari, C., Zerva, A., Topakas, E., Karampa, P.
PDB entry 8p1h: Crystal structure of the chimera of human 14-3-3 zeta and phosphorylated cytoplasmic loop fragment of the alpha7 acetylcholine receptor
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-05-12
Authors: Boyko, K.M., Kapitonova, A.A., Tugaeva, K.V., Varfolomeeva, L.A., Lyukmanova, E.N., Sluchanko, N.N.
PDB entry 8p1i: Single particle cryo-EM co-structure of Klebsiella pneumoniae AcrB with the BDM91288 efflux pump inhibitor at 2.97 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Klebsiella pneumoniae subsp. pneumoniae DSM 30104 = JCM 1662 = NBRC 14940
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2023-05-12
Authors: Boernsen, C., Mueller, R.T., Pos, K.M., Frangakis, A.S.
PDB entry 8p1j: Structure of hantaan orthohantavirus (HTNV) polymerase - Apo core
Classification: VIRAL PROTEIN
Source organism: Hantaan orthohantavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2023-05-12
Authors: Keown, J.R., Carrique, L., Grimes, J.M.
PDB entry 8p1k: Structure of hantaan orthohantavirus (HTNV) polymerase - Apo core endonuclease
Classification: VIRAL PROTEIN
Source organism: Hantaan orthohantavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2023-05-12
Authors: Keown, J.R., Carrique, L., Grimes, J.M.
PDB entry 8p1l: Structure of hantaan orthohantavirus (HTNV) polymerase - Apo full length
Classification: VIRAL PROTEIN
Source organism: Hantaan orthohantavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-12
Authors: Keown, J.R., Carrique, L., Grimes, J.M.
PDB entry 8p1m: Structure of hantaan orthohantavirus (HTNV) polymerase bound to 5'vRNA and NTP Mg
Classification: VIRAL PROTEIN
Source organism: Hantaan orthohantavirus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2023-05-12
Authors: Keown, J.R., Carrique, L., Grimes, J.M.
PDB entry 8p1n: Structure of hantaan orthohantavirus (HTNV) polymerase bound to 5'vRNA
Classification: VIRAL PROTEIN
Source organism: Hantaan orthohantavirus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-05-12
Authors: Keown, J.R., Carrique, L., Grimes, J.M.
PDB entry 8p1o: Solubilizer tag effect on PD-L1/inhibitor binding properties for m-terphenyl derivatives
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2023-05-12
Authors: Plewka, J., Magiera-Mularz, K., Surmiak, E., Kalinowska-Tluscik, J., Holak, T.A.
PDB entry 8p1p: USP28 in complex with AZ1
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2023-05-12
Authors: Sauer, F., Karal-Nair, R., Kisker, C.
PDB entry 8p1q: USP28 in complex with FT206
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2023-05-12
Authors: Sauer, F., Karal Nair, R., Kisker, C.
PDB entry 8p1r: Bifidobacterium asteroides alpha-L-fucosidase (TT1819) catalytic mutant.
Classification: SUGAR BINDING PROTEIN
Source organism: Bifidobacterium asteroides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.659 Å
Deposited: 2023-05-12
Authors: Owen, C.D., Penner, M., Gascuena, A.N., Wu, H., Hernando, P.J., Monaco, S., Le Gall, G., Gardner, R., Ndeh, D., Urbanowicz, P.A., Spencer, D.I.R., Walsh, M.A., Angulo, J., Juge, N.
PDB entry 8p1s: Bifidobacterium asteroides alpha-L-fucosidase (TT1819) in complex with fucose.
Classification: SUGAR BINDING PROTEIN
Source organism: Bifidobacterium asteroides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-12
Authors: Owen, C.D., Penner, M., Gascuena, A.N., Wu, H., Hernando, P.J., Monaco, S., Le Gall, G., Gardner, R., Ndeh, D., Urbanowicz, P.A., Spencer, D.I.R., Walsh, M.A., Angulo, J., Juge, N.
PDB entry 8p1t: Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor Z237451470
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.442 Å
Deposited: 2023-05-12
Authors: Thomsen, M., Thieulin-Pardo, G., Neumann, L.
PDB entry 8p1u: Structure of divisome complex FtsWIQLB
Classification: CELL CYCLE
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-12
Authors: Yang, L., Chang, S., Tang, D., Dong, H.
PDB entry 8p1v: Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric compound 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-05-12
Authors: Thomsen, M., Thieulin-Pardo, G., Neumann, L.
PDB entry 8p1w: Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with allosteric compound STL232591
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2023-05-12
Authors: Thomsen, M., Thieulin-Pardo, G., Neumann, L.
PDB entry 8p1x: TarM(Se)_G117R-UDP-glucose
Classification: TRANSFERASE
Source organism: Staphylococcus epidermidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2023-05-13
Authors: Guo, Y., Stehle, T.
PDB entry 8p1y: Arabidopsis thaliana mutated variant C244S of seryl-tRNA synthetase
Classification: CYTOSOLIC PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-05-13
Authors: Kekez, I., Soic, R., Rokov-Plavec, J., Matkovic-Calogovic, D.
PDB entry 8p1z: Arabidopsis thaliana cytosolic seryl-tRNA synthetase in addition of dithiothreitol (DTT)
Classification: CYTOSOLIC PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-05-13
Authors: Kekez, I., Soic, R., Rokov-Plavec, J., Matkovic-Calogovic, D.
PDB entry 8p20: TarM(Se)_G117R-UDP-4RboP-glucose
Classification: TRANSFERASE
Source organism: Staphylococcus epidermidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.848 Å
Deposited: 2023-05-14
Authors: Guo, Y., Stehle, T.
PDB entry 8p22: X-ray structure of acetylcholine-binding protein (AChBP) in complex with IOTA376.
Classification: CHOLINE-BINDING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-05-14
Authors: Cederfelt, D., Boronat, P., Dobritzsch, D., Hennig, S., Fitzgerald, E.A., de Esch, I.J.P., Danielson, U.H.
PDB entry 8p23: Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, ATP/CTP-bound state
Classification: BIOSYNTHETIC PROTEIN
Source organism: Prevotella copri
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-05-14
Authors: Banerjee, I., Bimai, O., Sjoberg, B.M., Logan, D.T.
PDB entry 8p24: The crystal structure of the C-terminal domain of Mengla nucleoprotein
Classification: VIRAL PROTEIN
Source organism: Mengla dianlovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.73 Å
Deposited: 2023-05-14
Authors: Ferrero, D.S., Tomas Gilabert, O., Verdaguer, N.
PDB entry 8p25: Solution structure of a chimeric U2AF2 RRM2 / FUBP1 N-Box
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-05-14
Authors: Hipp, C., Sattler, M.
PDB entry 8p26: Crystal structure of Arabidopsis thaliana PAXX
Classification: DNA BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2023-05-15
Authors: Ochi, T.
PDB entry 8p27: Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, dATP-bound state
Classification: BIOSYNTHETIC PROTEIN
Source organism: Segatella copri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2023-05-15
Authors: Banerjee, I., Bimai, O., Sjoberg, B.M., Logan, D.T.
PDB entry 8p28: Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its tetrameric, dATP-bound state
Classification: OXIDOREDUCTASE
Source organism: Segatella copri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2023-05-15
Authors: Banerjee, I., Bimai, O., Sjoberg, B.M., Logan, D.T.
PDB entry 8p29: TEAD2 in complex with an inhibitor
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2023-05-15
Authors: Guichou, J.F., Gelin, M., Allemand, F.
PDB entry 8p2a: Crystal structure of SaFMN3 domain 2
Classification: FLAVOPROTEIN
Source organism: Streptomyces azureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-15
Authors: Rozeboom, H.J., Fraaije, M.W.
PDB entry 8p2b: Crystal structure of CbFMN4 domain 1
Classification: FLAVOPROTEIN
Source organism: Clostridiaceae bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-05-15
Authors: Rozeboom, H.J., Fraaije, M.W.
PDB entry 8p2c: Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its tetrameric state produced in the presence of dATP and CTP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Segatella copri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2023-05-15
Authors: Banerjee, I., Bimai, O., Sjoberg, B.M., Logan, D.T.
PDB entry 8p2d: Cryo-EM structure of the dimeric form of the anaerobic ribonucleotide reductase from Prevotella copri produced in the presence of dATP and CTP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Segatella copri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2023-05-15
Authors: Banerjee, I., Bimai, O., Sjoberg, B.M., Logan, D.T.
PDB entry 8p2e: Homotypic interacting B1 fab bound to Chondroitin Sulfate A
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-05-16
Authors: Raghavan, S.S.R., Dagil, R., Wang, K.T., Salanti, A.
PDB entry 8p2f: Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state
Classification: RIBOSOME
Source organism: Escherichia coli; Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.44 Å
Deposited: 2023-05-16
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 8p2g: Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state
Classification: RIBOSOME
Source organism: Escherichia coli; Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.02 Å
Deposited: 2023-05-16
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 8p2h: Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state
Classification: RIBOSOME
Source organism: Escherichia coli; Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2023-05-16
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 8p2i: Cryo-EM structure of Pyrococcus furiosus apo form RNA polymerase contracted clamp conformation with Spt4/5
Classification: TRANSCRIPTION
Source organism: Pyrococcus furiosus DSM 3638
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-16
Authors: Tarau, D.M., Reichelt, R., Heiss, F.B., Pilsl, M., Hausner, W., Engel, C., Grohmann, D.
PDB entry 8p2j: Imine Reductase from Ajellomyces dermatitidis in space group C21
Classification: OXIDOREDUCTASE
Source organism: Blastomyces dermatitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2023-05-16
Authors: Sharma, M., Grogan, G.
PDB entry 8p2k: Ternary complex of translating ribosome, NAC and METAP1
Classification: TRANSLATION
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-16
Authors: Jia, M., Jaskolowski, M., Scaiola, A., Jomaa, A., Ban, N.
PDB entry 8p2l: A CHIMERA construct containing human SARM1 ARM and SAM domains and C. elegans TIR domain.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2023-05-16
Authors: Isupov, M.N., Opatowsky, Y.
PDB entry 8p2m: C. elegans TIR-1 protein.
Classification: HYDROLASE
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.82 Å
Deposited: 2023-05-16
Authors: Isupov, M.N., Opatowsky, Y.
PDB entry 8p2n: Polymeric form of the BTB domain of ZBTB8A from Xenopus laevis
Classification: TRANSCRIPTION
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-05-16
Authors: Coste, F., Mance, L., Suskiewicz, M.J.
PDB entry 8p2o: Dimeric mutant S103R of the BTB domain of ZBTB8A from Xenopus laevis
Classification: TRANSCRIPTION
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-16
Authors: Coste, F., Mance, L., Pukalo, Z., Suskiewicz, M.J.
PDB entry 8p2p: Polymeric form of the BTB domain of human ZBTB18
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.15 Å
Deposited: 2023-05-16
Authors: Coste, F., Mance, L., Pukalo, Z., Suskiewicz, M.J.
PDB entry 8p2q: Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-OH
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-05-16
Authors: Alsalman, Z., Girard, E.
PDB entry 8p2r: Human Aldose Reductase Mutant A299G/L300A in Complex with a Ligand with an IDD Structure (3-({[2-(carboxymethoxy)-4-fluorobenzoyl]amino}methyl)benzoic acid)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-05-16
Authors: Klee, L.-S., Heine, A., Klebe, G.
PDB entry 8p2s: Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, ATP/dTTP/GTP-bound state
Classification: BIOSYNTHETIC PROTEIN
Source organism: Segatella copri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-05-16
Authors: Bimai, O., Banerjee, I., Sjoberg, B.M., Logan, D.T.
PDB entry 8p2t: Bovine naive ultralong antibody AbD08* collected at 100K
Classification: IMMUNE SYSTEM
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-05-16
Authors: Clarke, J.D., Douangamath, A., Mikolajek, H., Stuart, D.I., Owens, R.J.
PDB entry 8p2u: Crystal structure of S6BE with Silicotungstic Acid (STA) polyoxometalate
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-05-16
Authors: Wouters, S.M.L., Kamata, K., Vandebroek, L.
PDB entry 8p2v: Neisseria meningitidis Type IV pilus SB-GATDH variant
Classification: PROTEIN FIBRIL
Source organism: Neisseria meningitidis 8013
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-05-16
Authors: Fernandez-Martinez, D., Dumenil, G.
PDB entry 8p2w: Structure of human SIT1 (focussed map / refinement)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.76 Å
Deposited: 2023-05-16
Authors: Li, H.Z., Pike, A.C.W., Chi, G., Hansen, J.S., Lee, S.G., Rodstrom, K.E.J., Bushell, S.R., Speedman, D., Evans, A., Wang, D., He, D., Shrestha, L., Nasrallah, C., Chalk, R., Moreira, T., MacLean, E.M., Marsden, B., Bountra, C., Burgess-Brown, N.A., Dafforn, T.R., Carpenter, E.P., Sauer, D.B.
PDB entry 8p2x: Structure of human SIT1:ACE2 complex (open PD conformation)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2023-05-16
Authors: Li, H.Z., Pike, A.C.W., Chi, G., Hansen, J.S., Lee, S.G., Rodstrom, K.E.J., Bushell, S.R., Speedman, D., Evans, A., Wang, D., He, D., Shrestha, L., Nasrallah, C., Chalk, R., Moreira, T., MacLean, E.M., Marsden, B., Bountra, C., Burgess-Brown, N.A., Dafforn, T.R., Carpenter, E.P., Sauer, D.B.
PDB entry 8p2y: Structure of human SIT1:ACE2 complex (closed PD conformation)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2023-05-16
Authors: Li, H.Z., Pike, A.C.W., Chi, G., Hansen, J.S., Lee, S.G., Rodstrom, K.E.J., Bushell, S.R., Speedman, D., Evans, A., Wang, D., He, D., Shrestha, L., Nasrallah, C., Chalk, R., Moreira, T., MacLean, E.M., Marsden, B., Bountra, C., Burgess-Brown, N.A., Dafforn, T.R., Carpenter, E.P., Sauer, D.B.
PDB entry 8p2z: Structure of human SIT1 bound to L-pipecolate (focussed map / refinement)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-05-16
Authors: Li, H.Z., Pike, A.C.W., Chi, G., Hansen, J.S., Lee, S.G., Rodstrom, K.E.J., Bushell, S.R., Speedman, D., Evans, A., Wang, D., He, D., Shrestha, L., Nasrallah, C., Chalk, R., Moreira, T., MacLean, E.M., Marsden, B., Bountra, C., Burgess-Brown, N.A., Dafforn, T.R., Carpenter, E.P., Sauer, D.B.
PDB entry 8p30: Structure of human SIT1:ACE2 complex (open PD conformation) bound to L-pipecolate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-05-16
Authors: Li, H.Z., Pike, A.C.W., Chi, G., Hansen, J.S., Lee, S.G., Rodstrom, K.E.J., Bushell, S.R., Speedman, D., Evans, A., Wang, D., He, D., Shrestha, L., Nasrallah, C., Chalk, R., Moreira, T., MacLean, E.M., Marsden, B., Bountra, C., Burgess-Brown, N.A., Dafforn, T.R., Carpenter, E.P., Sauer, D.B.
PDB entry 8p31: Structure of human SIT1:ACE2 complex (closed PD conformation) bound to L-pipecolate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2023-05-16
Authors: Li, H.Z., Pike, A.C.W., Chi, G., Hansen, J.S., Lee, S.G., Rodstrom, K.E.J., Bushell, S.R., Speedman, D., Evans, A., Wang, D., He, D., Shrestha, L., Nasrallah, C., Chalk, R., Moreira, T., MacLean, E.M., Marsden, B., Bountra, C., Burgess-Brown, N.A., Dafforn, T.R., Carpenter, E.P., Sauer, D.B.