LiteFold/PDB huggingface dataset:
PDB entry 3va2: Crystal structure of human Interleukin-5 in complex with its alpha receptor
Classification: CYTOKINE/CYTOKINE RECEPTOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.703 Å
Deposited: 2011-12-28
Authors: Kusano, S., Kukimoto-Niino, M., Shirouzu, M., Yokoyama, S.
PDB entry 3va3: Crystal structure of RNase T in complex with a duplex DNA product (stem loop DNA with 2 nucleotide 3' overhang)
Classification: HYDROLASE/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.714 Å
Deposited: 2011-12-28
Authors: Hsiao, Y.-Y., Yuan, H.S.
PDB entry 3va4: Crystal structure of the mammalian MDC1 FHA domain complexed with CHK2 pThr68 peptide
Classification: CELL CYCLE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2011-12-28
Authors: Wu, H.H., Wu, P.Y., Huang, K.F., Kao, Y.Y., Tsai, M.D.
PDB entry 3va5: Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V23A at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2011-12-28
Authors: Caro, J.A., Nam, S.P., Heroux, A., Schlessman, J.L., Garcia-Moreno, E.B.
PDB entry 3va6: Crystal Structure of the extracellular domain of the putative hybrid two component system BT4673 from B. thetaiotaomicron
Classification: TRANSCRIPTION
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2011-12-28
Authors: Zhang, Z., Liu, Q., Hendrickson, W.A.
PDB entry 3va7: Crystal structure of the Kluyveromyces lactis Urea Carboxylase
Classification: LIGASE
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-12-29
Authors: Fan, C., Xiang, S.
PDB entry 3va8: Crystal structure of enolase FG03645.1 (target EFI-502278) from Gibberella zeae PH-1 complexed with magnesium, formate and sulfate
Classification: LYASE
Source organism: Gibberella zeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-12-29
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 3va9: Crystal structure of the Rhodopseudomonas palustris histidine kinase HK9 sensor domain
Classification: TRANSFERASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-12-29
Authors: Zhang, Z., Liu, Q., Hendrickson, W.A.
PDB entry 3vaa: 1.7 Angstrom Resolution Crystal Structure of Shikimate Kinase from Bacteroides thetaiotaomicron
Classification: TRANSFERASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-12-29
Authors: Minasov, G., Light, S.H., Halavaty, A., Shuvalova, L., Papazisi, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3vab: Crystal structure of Diaminopimelate decarboxylase from Brucella melitensis bound to PLP
Classification: LYASE
Source organism: Brucella melitensis bv. 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-12-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3vac: Crystal Structure of the CFA/I Enterotoxigenic E. coli adhesin CfaE mutant G168D
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-12-29
Authors: Liu, Y., Esser, L., Xia, D.
PDB entry 3vad: Crystal structure of I170F mutant branched-chain alpha-ketoacid dehydrogenase kinase in complex with 3,6-dichlorobenzo[b]thiophene-2-carboxylic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.602 Å
Deposited: 2011-12-29
Authors: Ahmed, K., Gui, W.J., Tso, S.C., Chuang, J.L., Wynn, R.M., Chuang, D.T.
PDB entry 3vae: Crystal Structure of M. tuberculosis LD-transpeptidase type 2 with Modified Catalytic Cysteine (C354)
Classification: peptidoglycan binding protein
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2011-12-29
Authors: Erdemli, S., Bianchet, M.A., Gupta, R., Lamichhane, G., Amzel, L.M.
PDB entry 3vaf: Structure of U2AF65 variant with BrU3 DNA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2011-12-29
Authors: Jenkins, J.L., Kielkopf, C.L.
PDB entry 3vag: Structure of U2AF65 variant with BrU3C2 DNA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2011-12-29
Authors: Jenkins, J.L., Kielkopf, C.L.
PDB entry 3vah: Structure of U2AF65 variant with BrU3C4 DNA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-12-29
Authors: Jenkins, J.L., Kielkopf, C.L.
PDB entry 3vai: Structure of U2AF65 variant with BrU3C5 DNA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-12-29
Authors: Jenkins, J.L., Frato, K.H., Kielkopf, C.L.
PDB entry 3vaj: Structure of U2AF65 variant with BrU5C6 DNA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-12-29
Authors: Jenkins, J.L., Kielkopf, C.L.
PDB entry 3vak: Structure of U2AF65 variant with BrU5 DNA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2011-12-29
Authors: Jenkins, J.L., Kielkopf, C.L.
PDB entry 3val: Structure of U2AF65 variant with BrU5C1 DNA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-12-29
Authors: Jenkins, J.L., Frato, K.H., Kielkopf, C.L.
PDB entry 3vam: Structure of U2AF65 variant with BrU5C2 DNA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2011-12-29
Authors: Jenkins, J.L., Kielkopf, C.L.
PDB entry 3vap: Synthesis and SAR Studies of imidazo-[1,2-a]-pyrazine Aurora kinase inhibitors with improved off target kinase selectivity
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2011-12-29
Authors: Voss, M.E., Rainka, M.P., Fleming, M., Peterson, L.H., Belanger, D.B., Siddiqui, M.A., Hruza, A., Voigt, J., Basso, A.D., Gray, K.
PDB entry 3vaq: Adenosine kinase from Schistosoma mansoni in complex with adenosine
Classification: TRANSFERASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2011-12-29
Authors: Romanello, L., Bachega, F.R., Garatt, R.C., DeMarco, R., Pereira, H.M.
PDB entry 3var: Crystal structure of DNPEP, ZnZn form
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2011-12-29
Authors: Kiser, P.D., Chen, Y., Palczewski, K.
PDB entry 3vas: Adenosine kinase from Schistosoma mansoni in complex with adenosine in occluded loop conformation
Classification: TRANSFERASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2011-12-29
Authors: Romanello, L., Bachega, F.R., Garatt, R.C., DeMarco, R., Brandao-neto, J., Pereira, H.M.
PDB entry 3vat: Crystal structure of DNPEP, ZnMg form
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-12-29
Authors: Kiser, P.D., Chen, Y., Palczewski, K.
PDB entry 3vau: Myoglobin nitrite structure: nitriheme modified
Classification: OXYGEN TRANSPORT
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-12-29
Authors: Yi, J., Richter-Addo, G.B.
PDB entry 3vav: Crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase from Burkholderia thailandensis
Classification: TRANSFERASE
Source organism: Burkholderia thailandensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-12-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3vaw: Crystal structure of a smt fusion peptidyl-prolyl cis-trans isomerase with surface mutation v3i from burkholderia pseudomallei complexed with fk506
Classification: Isomerase, PROTEIN BINDING/INHIBITOR
Source organism: Burkholderia pseudomallei; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2011-12-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3vax: Crystal structure of DndA from streptomyces lividans
Classification: TRANSFERASE
Source organism: Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2011-12-30
Authors: Zhang, Z., Chen, F., Lin, K., Wu, G.
PDB entry 3vay: Crystal structure of 2-Haloacid Dehalogenase from Pseudomonas syringae pv. Tomato DC3000
Classification: HYDROLASE
Source organism: Pseudomonas syringae pv. tomato
Experimental method: X-RAY DIFFRACTION
Resolution: 1.979 Å
Deposited: 2011-12-30
Authors: Hou, Z., Zhang, H., Li, M., Chang, W.
PDB entry 3vaz: Crystal structure of Staphylococcal GAPDH1 in a hexagonal space group
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2011-12-30
Authors: Roychowdhury, A., Mukherjee, S., Dutta, D., Das, A.K.
PDB entry 3vb0: Crystal structure of 2,2',3-trihydroxybiphenyl 1,2-dioxygenase from dibenzofuran-degrading Sphingomonas wittichii strain RW1
Classification: OXIDOREDUCTASE
Source organism: Sphingomonas wittichii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-12-30
Authors: Koksal, M., Kumar, P., Bolin, J.T.
PDB entry 3vb1: Crystal Structure of Anopholes gambiae odorant binding protein 20 in open state
Classification: ODORANT-BINDING PROTEIN
Source organism: Anopheles gambiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-12-30
Authors: Ziemba, B.P., Jones, D.N.
PDB entry 3vb2: Crystal Structure of the Reduced Form of MarR from E.coli
Classification: transcription regulator
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-12-30
Authors: Lou, H., Zhu, R., Hao, Z.
PDB entry 3vb3: Crystal structure of SARS-CoV 3C-like protease in apo form
Classification: HYDROLASE
Source organism: SARS coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-12-31
Authors: Chuck, C.P., Wong, K.B.
PDB entry 3vb4: Crystal structure of SARS-CoV 3C-like protease with B4Z
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: SARS coronavirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-12-31
Authors: Chuck, C.P., Wong, K.B.
PDB entry 3vb5: Crystal structure of SARS-CoV 3C-like protease with C4Z
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: SARS coronavirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2011-12-31
Authors: Chuck, C.P., Wong, K.B.
PDB entry 3vb6: Crystal structure of SARS-CoV 3C-like protease with C6Z
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: SARS coronavirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-12-31
Authors: Chuck, C.P., Wong, K.B.
PDB entry 3vb7: Crystal structure of SARS-CoV 3C-like protease with M4Z
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: SARS coronavirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2011-12-31
Authors: Chuck, C.P., Wong, K.B.
PDB entry 3vb8: Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR43
Classification: DE NOVO PROTEIN
Source organism: artificial gene
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2011-12-31
Authors: Seetharaman, J., Su, M., Procko, E., Baker, D., Ciccosanti, C., Sahdev, S., Xiao, R., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3vb9: Crystal structure of VPA0735 from Vibrio parahaemolyticus in monoclinic form, NorthEast Structural Genomics target VpR109
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-12-31
Authors: Seetharaman, J., Neely, H., Cunningham, K., Ciccosanti, C., Bjelic, S., Acton, T.B., Xiao, R., Everett, J.K., Snell, E.H., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3vba: Crystal structure of methanogen 3-isopropylmalate isomerase small subunit
Classification: LYASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-01-02
Authors: Hwang, K.Y., Lee, E.H.
PDB entry 3vbb: Crystal Structure of Seryl-tRNA Synthetase from Human at 2.9 angstroms
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.891 Å
Deposited: 2012-01-02
Authors: Xu, X.L., Yang, X.-L.
PDB entry 3vbc: Crystal Structure of iL-17 receptor B SEFIR domain
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-01-02
Authors: Zhang, B., Liu, C., Li, X., Deng, J.
PDB entry 3vbd: Complex of human carbonic anhydrase II with 4-(6-methoxy-3,4-dihydroisoquinolin-1-yl)benzenesulfonamide
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2012-01-02
Authors: Mader, P., Brynda, J., Rezacova, P.
PDB entry 3vbe: Crystal structure of beta-cyanoalanine synthase in soybean
Classification: TRANSFERASE
Source organism: Glycine max
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-01-02
Authors: Yi, H., Jez, J.M.
PDB entry 3vbf: Crystal structure of formaldehyde treated human Enterovirus 71 (space group I23)
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-01-02
Authors: Wang, X., Peng, W., Ren, J., Hu, Z., Xu, J., Lou, Z., Li, X., Yin, W., Shen, X., Porta, C., Walter, T.S., Evans, G., Axford, D., Owen, R., Rowlands, D.J., Wang, J., Stuart, D.I., Fry, E.E., Rao, Z.
PDB entry 3vbg: Structure of hDM2 with Dimer Inducing Indolyl Hydantoin RO-2443
Classification: Ligase/ligase activator
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-01-02
Authors: Lukacs, C.M., Janson, C.A., Graves, B.J.
PDB entry 3vbh: Crystal structure of formaldehyde treated human enterovirus 71 (space group R32)
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-02
Authors: Wang, X., Peng, W., Ren, J., Hu, Z., Xu, J., Lou, Z., Li, X., Yin, W., Shen, X., Porta, C., Walter, T.S., Evans, G., Axford, D., Owen, R., Rowlands, D.J., Wang, J., Stuart, D.I., Fry, E.E., Rao, Z.
PDB entry 3vbi: Crystal Structure of AntD, an N-acyltransferase from Bacillus cereus in complex with dTDP-4-amino-4,6-dideoxyglucose and Coenzyme A
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-01-02
Authors: Kubiak, R.L., Holden, H.M.
PDB entry 3vbj: Crystal Structure of AntD, an N-acyltransferase from Bacillus cereus in complex with dTDP and 3-hydroxybutyryl-CoA
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-01-02
Authors: Kubiak, R.L., Holden, H.M.
PDB entry 3vbk: Crystal Structure of the S84A mutant of AntD, an N-acyltransferase from Bacillus cereus in complex with dTDP-4-amino-4,6-dideoxyglucose and Coenzyme A
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-01-02
Authors: Kubiak, R.L., Holden, H.M.
PDB entry 3vbl: Crystal Structure of the S84C mutant of AntD, an N-acyltransferase from Bacillus cereus in complex with dTDP-4-amino-4,6-dideoxyglucose and Coenzyme A
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-01-02
Authors: Kubiak, R.L., Holden, H.M.
PDB entry 3vbm: Crystal Structure of the S84T mutant of AntD, an N-acyltransferase from Bacillus cereus in complex with dTDP and Coenzyme A
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-01-02
Authors: Kubiak, R.L., Holden, H.M.
PDB entry 3vbn: Crystal Structure of the D94A mutant of AntD, an N-acyltransferase from Bacillus cereus in complex with dTDP and Coenzyme A
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-01-02
Authors: Kubiak, R.L., Holden, H.M.
PDB entry 3vbo: Crystal structure of formaldehyde treated empty human Enterovirus 71 particle (cryo at 100K)
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2012-01-02
Authors: Wang, X., Peng, W., Ren, J., Hu, Z., Xu, J., Lou, Z., Li, X., Yin, W., Shen, X., Porta, C., Walter, T.S., Evans, G., Axford, D., Owen, R., Rowlands, D.J., Wang, J., Stuart, D.I., Fry, E.E., Rao, Z.
PDB entry 3vbp: Crystal Structure of the D94N mutant of AntD, an N-acyltransferase from Bacillus cereus in complex with dTDP and Coenzyme A
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-02
Authors: Kubiak, R.L., Holden, H.M.
PDB entry 3vbq: Exploitation of hydrogen bonding constraints and flat hydrophobic energy landscapes in Pim-1 kinase needle screening and inhibitor design
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-01-02
Authors: Liu, J.
PDB entry 3vbr: Crystal structure of formaldehyde treated empty human Enterovirus 71 particle (room temperature)
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2012-01-02
Authors: Wang, X., Peng, W., Ren, J., Hu, Z., Xu, J., Lou, Z., Li, X., Yin, W., Shen, X., Porta, C., Walter, T.S., Evans, G., Axford, D., Owen, R., Rowlands, D.J., Wang, J., Stuart, D.I., Fry, E.E., Rao, Z.
PDB entry 3vbs: Crystal structure of human Enterovirus 71
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-01-02
Authors: Wang, X., Peng, W., Ren, J., Hu, Z., Xu, J., Lou, Z., Li, X., Yin, W., Shen, X., Porta, C., Walter, T.S., Evans, G., Axford, D., Owen, R., Rowlands, D.J., Wang, J., Stuart, D.I., Fry, E.E., Rao, Z.
PDB entry 3vbt: Exploitation of hydrogen bonding constraints and flat hydrophobic energy landscapes in Pim-1 kinase needle screening and inhibitor design
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2012-01-02
Authors: Liu, J.
PDB entry 3vbu: Crystal structure of empty human Enterovirus 71 particle
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2012-01-02
Authors: Wang, X., Peng, W., Ren, J., Hu, Z., Xu, J., Lou, Z., Li, X., Yin, W., Shen, X., Porta, C., Walter, T.S., Evans, G., Axford, D., Owen, R., Rowlands, D.J., Wang, J., Stuart, D.I., Fry, E.E., Rao, Z.
PDB entry 3vbv: Exploitation of hydrogen bonding constraints and flat hydrophobic energy landscapes in Pim-1 kinase needle screening and inhibitor design
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2012-01-02
Authors: Liu, J.
PDB entry 3vbw: Exploitation of hydrogen bonding constraints and flat hydrophobic energy landscapes in Pim-1 kinase needle screening and inhibitor design
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2012-01-02
Authors: Liu, J.
PDB entry 3vbx: Exploitation of hydrogen bonding constraints and flat hydrophobic energy landscapes in Pim-1 kinase needle screening and inhibitor design
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2012-01-02
Authors: Liu, J.
PDB entry 3vby: Exploitation of hydrogen bonding constraints and flat hydrophobic energy landscapes in Pim-1 kinase needle screening and inhibitor design
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2012-01-02
Authors: Liu, J.
PDB entry 3vbz: Crystal structure of Taipoxin beta subunit isoform 2
Classification: TOXIN
Source organism: Oxyuranus scutellatus scutellatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2012-01-03
Authors: Cendron, L., Micetic, I., Polverino, P., Beltramini, M., Paoli, M.
PDB entry 3vc0: Crystal structure of Taipoxin beta subunit isoform 1
Classification: TOXIN
Source organism: Oxyuranus scutellatus scutellatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2012-01-03
Authors: Cendron, L., Micetic, I., Polverino de Laureto, P., Beltramini, M., Paoli, M.
PDB entry 3vc1: Crystal structure of geranyl diphosphate C-methyltransferase from Streptomyces coelicolor A3(2) in complex with Mg2+, geranyl-S-thiolodiphosphate, and S-adenosyl-L-homocysteine
Classification: TRANSFERASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2012-01-03
Authors: Koksal, M., Christianson, D.W.
PDB entry 3vc2: Crystal structure of geranyl diphosphate C-methyltransferase from Streptomyces coelicolor A3(2) in complex with Mg2+, geranyl diphosphate, and S-adenosyl-L-homocysteine
Classification: TRANSFERASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.046 Å
Deposited: 2012-01-03
Authors: Koksal, M., Christianson, D.W.
PDB entry 3vc3: Crystal structure of beta-cyanoalanine synthase K95A mutant in soybean
Classification: TRANSFERASE
Source organism: Glycine max
Experimental method: X-RAY DIFFRACTION
Resolution: 1.766 Å
Deposited: 2012-01-03
Authors: Yi, H., Jez, J.M.
PDB entry 3vc4: Exploitation of hydrogen bonding constraints and flat hydrophobic energy landscapes in Pim-1 kinase needle screening and inhibitor design
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2012-01-03
Authors: Liu, J.
PDB entry 3vc5: Crystal structure of enolase Tbis_1083(TARGET EFI-502310) FROM Thermobispora bispora DSM 43833 complexed with phosphate
Classification: ISOMERASE
Source organism: Thermobispora bispora
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-01-03
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 3vc6: Crystal structure of enolase Tbis_1083(TARGET EFI-502310) FROM Thermobispora bispora DSM 43833 complexed with magnesium and formate
Classification: ISOMERASE
Source organism: Thermobispora bispora
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2012-01-03
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 3vc7: Crystal Structure of a putative oxidoreductase from Sinorhizobium meliloti 1021
Classification: OXIDOREDUCTASE
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.231 Å
Deposited: 2012-01-03
Authors: Ghosh, A., Bhoshle, R., Toro, R., Gizzi, A., Hillerich, B., Seidel, R., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 3vc8: Crystal structure of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59
Classification: VIRAL PROTEIN
Source organism: Murine hepatitis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-01-03
Authors: Xu, X., Lou, Z., Ma, Y., Chen, X., Yang, Z., Tong, X., Zhao, Q., Xu, Y., Deng, H., Bartlam, M., Rao, Z.
PDB entry 3vca: Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman and UV-visible Spectroscopic Analysis of a Rieske-type Demethylase
Classification: OXIDOREDUCTASE
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2012-01-03
Authors: Daughtry, K.D., Xiao, Y., Stoner-Ma, D., Cho, E., Orville, A.M., Liu, P., Allen, K.N.
PDB entry 3vcb: C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis virus A59
Classification: VIRAL PROTEIN
Source organism: Murine hepatitis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-01-03
Authors: Xu, X., Lou, Z., Ma, Y., Chen, X., Yang, Z., Tong, X., Zhao, Q., Xu, Y., Deng, H., Bartlam, M., Rao, Z.
PDB entry 3vcc: CRYSTAL STRUCTURE OF D-Galacturonate Dehydratase from GEOBACILLUS SP. complexed with Mg
Classification: METAL BINDING PROTEIN
Source organism: Paenibacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2012-01-03
Authors: Fedorov, A.A., Fedorov, E.V., Groninger-Poe, F., Gerlt, J.A., Almo, S.C.
PDB entry 3vcd: Computationally Designed Self-assembling Octahedral Cage protein, O333, Crystallized in space group R32
Classification: ELECTRON TRANSPORT
Source organism: Salmonella enterica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-01-03
Authors: Sawaya, M.R., King, N.P., Sheffler, W., Baker, D., Yeates, T.O.
PDB entry 3vce: Thaumatin by LB based Hanging Drop Vapour Diffusion after 18.1 MGy X-Ray dose at ESRF ID29 beamline (Best Case)
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-04
Authors: Belmonte, L., Pechkova, E., Scudieri, D., Nicolini, C.
PDB entry 3vcf: SSV1 integrase C-terminal catalytic domain (174-335aa)
Classification: RECOMBINATION
Source organism: Sulfolobus virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-01-04
Authors: Ouyang, S., Liang, W., Huang, L., Liu, Z.-J.
PDB entry 3vcg: Thaumatin by LB based Hanging Drop Vapour Diffusion after 18.1 MGy X-Ray dose at ESRF ID29 beamline (Worst Case)
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-04
Authors: Belmonte, L., Pechkova, E., Scudieri, D., Nicolini, C.
PDB entry 3vch: Thaumatin by Classical Hanging Drop Vapour Diffusion after 9.05 MGy X-Ray dose at ESRF ID29 beamline (Best Case)
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-04
Authors: Belmonte, L., Pechkova, E., Scudieri, D., Nicolini, C.
PDB entry 3vci: Thaumatin by Classical Hanging Drop Vapour Diffusion after 9.05 MGy X-Ray dose at ESRF ID29 beamline (Worst Case)
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-04
Authors: Belmonte, L., Pechkova, E., Scudieri, D., Nicolini, C.
PDB entry 3vcj: Thaumatin by LB Hanging Drop Vapour Diffusion after 9.05 MGy X-Ray dose at ESRF ID29 beamline (Best Case)
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-04
Authors: Belmonte, L., Pechkova, E., Scudieri, D., Nicolini, C.
PDB entry 3vck: Thaumatin by LB Hanging Drop Vapour Diffusion after 9.05 MGy X-Ray dose at ESRF ID29 beamline (Worst Case)
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-04
Authors: Belmonte, L., Pechkova, E., Scudieri, D., Nicolini, C.
PDB entry 3vcl: Crystal Structure of HLA-B7 with the HCMV pp65 peptide RPHERNGFTVL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-01-04
Authors: Petersen, J., Rossjohn, J.
PDB entry 3vcm: Crystal structure of human prorenin
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.93 Å
Deposited: 2012-01-04
Authors: Morales, R., Watier, Y., Bocskei, Z.
PDB entry 3vcn: Crystal structure of mannonate dehydratase (target EFI-502209) from Caulobacter crescentus CB15
Classification: LYASE
Source organism: CAULOBACTER CRESCENTUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2012-01-04
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 3vco: Schistosoma mansoni Dihydrofolate reductase
Classification: OXIDOREDUCTASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.946 Å
Deposited: 2012-01-04
Authors: Serrao, V.H.B., Romanello, L., Cassago, A., DeMarco, R., Pereira, H.M.
PDB entry 3vcp: The 2.2 Angstrom structure of Stc2 with proline bound in the active site
Classification: OXIDOREDUCTASE
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-01-04
Authors: Daughtry, K.D., Xiao, Y., Stoner-Ma, D., Cho, E., Orville, A.M., Liu, P., Allen, K.N.
PDB entry 3vcr: Crystal structure of a putative Kdpg (2-keto-3-deoxy-6-phosphogluconate) aldolase from Oleispira antarctica
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Oleispira antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2012-01-04
Authors: Stogios, P.J., Kagan, O., Di Leo, R., Yim, V., Joachimiak, A., Edwards, A.M., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3vcx: Crystal structure of a putative glyoxalase/bleomycin resistance protein from Rhodopseudomonas palustris CGA009
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Rhodopseudomonas palustris CGA009
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2012-01-04
Authors: Stogios, P.J., Chang, C., Evdokimova, E., Egorova, O., Joachimiak, A., Edwards, A.M., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3vcy: Structure of MurA (UDP-N-acetylglucosamine enolpyruvyl transferase), from Vibrio fischeri in complex with substrate UDP-N-acetylglucosamine and the drug fosfomycin.
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Vibrio fischeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.925 Å
Deposited: 2012-01-04
Authors: Bensen, D.C., Rodriguez, S., Nix, J., Cunningham, M.L., Tari, L.W.
PDB entry 3vcz: 1.80 Angstrom resolution crystal structure of a putative translation initiation inhibitor from Vibrio vulnificus CMCP6
Classification: TRANSLATION
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-01-04
Authors: Halavaty, A.S., Minasov, G., Filippova, E.V., Dubrovska, I., Winsor, J., Shuvalova, L., Papazisi, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3vd0: structure of p73 DNA binding domain tetramer modulates p73 transactivation
Classification: ANTITUMOR PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2012-01-04
Authors: Ethayathulla, A.S., Tse, P.W., Nguyen, S., Viadiu, H.
PDB entry 3vd1: structure of p73 DNA binding domain tetramer modulates p73 transactivation
Classification: ANTITUMOR PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2012-01-04
Authors: Ethayathulla, A.S., Tse, P.W., Nguyen, S., Viadiu, H.
PDB entry 3vd2: structure of p73 DNA binding domain tetramer modulates p73 transactivation
Classification: ANTITUMOR PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2012-01-04
Authors: Ethayathulla, A.S., Tse, P.W., Nguyen, S., Viadiu, H.
PDB entry 3vd3: E. coli (lacZ) beta-galactosidase (N460D)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-01-04
Authors: Wheatley, R.W., Kappelhoff, J.C., Hahn, J.N., Dugdale, M.L., Dutkoski, M.J., Tamman, S.D., Fraser, M.E., Huber, R.E.
PDB entry 3vd4: E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-01-04
Authors: Wheatley, R.W., Kappelhoff, J.C., Hahn, J.N., Dugdale, M.L., Dutkoski, M.J., Tamman, S.D., Fraser, M.E., Huber, R.E.
PDB entry 3vd5: E. coli (lacZ) beta-galactosidase (N460S)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-01-04
Authors: Wheatley, R.W., Kappelhoff, J.C., Hahn, J.N., Dugdale, M.L., Dutkoski, M.J., Tamman, S.D., Fraser, M.E., Huber, R.E.
PDB entry 3vd6: Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P21 Crystal Form
Classification: TRANSCRIPTION/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2012-01-04
Authors: Jacques, D.A., Ripin, N., Wilkinson-White, L.E., Guss, J.M., Matthews, J.M.
PDB entry 3vd7: E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2012-01-04
Authors: Wheatley, R.W., Kappelhoff, J.C., Hahn, J.N., Dugdale, M.L., Dutkoski, M.J., Tamman, S.D., Fraser, M.E., Huber, R.E.
PDB entry 3vd8: Crystal structure of human AIM2 PYD domain with MBP fusion
Classification: SUGAR BINDING PROTEIN,SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.0685 Å
Deposited: 2012-01-04
Authors: Jin, T.C., Perry, A., Smith, P., Xiao, T.S.
PDB entry 3vd9: E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2012-01-04
Authors: Wheatley, R.W., Kappelhoff, J.C., Hahn, J.N., Dugdale, M.L., Dutkoski, M.J., Tamman, S.D., Fraser, M.E., Huber, R.E.
PDB entry 3vda: E. coli (lacZ) beta-galactosidase (N460T)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-01-04
Authors: Wheatley, R.W., Kappelhoff, J.C., Hahn, J.N., Dugdale, M.L., Dutkoski, M.J., Tamman, S.D., Fraser, M.E., Huber, R.E.
PDB entry 3vdb: E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2012-01-04
Authors: Wheatley, R.W., Kappelhoff, J.C., Hahn, J.N., Dugdale, M.L., Dutkoski, M.J., Tamman, S.D., Fraser, M.E., Huber, R.E.
PDB entry 3vdc: E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2012-01-04
Authors: Wheatley, R.W., Kappelhoff, J.C., Hahn, J.N., Dugdale, M.L., Dutkoski, M.J., Tamman, S.D., Fraser, M.E., Huber, R.E.
PDB entry 3vdd: Structure of HRV2 capsid complexed with antiviral compound BTA798
Classification: VIRUS
Source organism: Human rhinovirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2012-01-05
Authors: Morton, C.J., Feil, S.C., Parker, M.W.
PDB entry 3vdf: Crystal Structure of C-lobe of Bovine lactoferrin Complexed with diaminopimelic acid at 1.46 A Resolution
Classification: METAL BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2012-01-05
Authors: Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 3vdg: Crystal structure of enolase MSMEG_6132 (TARGET EFI-502282) from Mycobacterium smegmatis str. MC2 155 complexed with formate and acetate
Classification: LYASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-01-05
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 3vdh: Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14
Classification: HYDROLASE
Source organism: Prevotella bryantii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2012-01-05
Authors: Stogios, P.J., Evdokimova, E., Egorova, O., Yim, V., Joachimiak, A., Edwards, A.M., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3vdi: Structure of the FMO protein from Pelodictyon phaeum
Classification: PHOTOSYNTHESIS
Source organism: Pelodictyon phaeum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2012-01-05
Authors: Tronrud, D.E., Larson, C.R., Seng, C.O., Lauman, L., Matthies, H.J., Wen, J., Blankenship, R.E., Allen, J.P.
PDB entry 3vdj: Crystal structure of circumsporozoite protein aTSR domain, R32 native form
Classification: CELL INVASION
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2012-01-05
Authors: Doud, M.B., Koksal, A.C., Mi, L.Z., Song, G., Lu, C., Springer, T.A.
PDB entry 3vdk: Crystal structure of circumsporozoite protein aTSR domain, R32 platinum-bound form
Classification: CELL INVASION
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.847 Å
Deposited: 2012-01-05
Authors: Doud, M.B., Koksal, A.C., Mi, L.Z., Song, G., Lu, C., Springer, T.A.
PDB entry 3vdl: Crystal structure of circumsporozoite protein aTSR domain, P43212 form
Classification: CELL INVASION
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2012-01-05
Authors: Doud, M.B., Koksal, A.C., Mi, L.Z., Song, G., Lu, C., Springer, T.A.
PDB entry 3vdm: Crystal Structure of VldE, the pseudo-glycosyltransferase which catalyzes non-glycosidic C-N coupling in Validamycin A biosynthesis
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus subsp. limoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2012-01-05
Authors: Cavalier, M.C., Yim, Y.-S., Asamizu, S., Neau, D., Mahmud, T., Lee, Y.-H.
PDB entry 3vdn: Crystal Structure of VldE, the pseudo-glycosyltransferase, in complex with GDP
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus subsp. limoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2012-01-05
Authors: Cavalier, M.C., Yim, Y.-S., Asamizu, S., Neau, D., Mahmud, T., Lee, Y.-H.
PDB entry 3vdp: Structure and biochemical studies of the recombination mediator protein RecR in RecFOR pathway
Classification: RECOMBINATION
Source organism: Thermoanaerobacter tengcongensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.451 Å
Deposited: 2012-01-05
Authors: Tang, Q., Yan, X.X., Liang, D.C.
PDB entry 3vdq: Crystal structure of alcaligenes faecalis D-3-hydroxybutyrate dehydrogenase in complex with NAD(+) and acetate
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-01-06
Authors: Hoque, M.M., Shimizu, S., Hossain, M.T., Yamamoto, T., Suzuki, K., Takenaka, A.
PDB entry 3vdr: Crystal structure of D-3-hydroxybutyrate dehydrogenase, prepared in the presence of the substrate D-3-hydroxybutyrate and NAD(+)
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-01-06
Authors: Hoque, M.M., Shimizu, S., Juan, E.C.M., Sato, Y., Hossain, M.T., Yamamoto, T., Imamura, S., Amano, H., Suzuki, K., Sekiguchi, T., Tsunoda, M., Takenaka, A.
PDB entry 3vdu: Structure of recombination mediator protein RecRK21G mutant
Classification: RECOMBINATION
Source organism: Thermoanaerobacter tengcongensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-01-06
Authors: Tang, Q., Yan, X.X., Liang, D.C.
PDB entry 3vdx: Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains
Classification: DE NOVO PROTEIN
Source organism: Influenza A virus; Streptomyces aureofaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.002 Å
Deposited: 2012-01-06
Authors: Lai, Y.-T., Cascio, D., Yeates, T.O.
PDB entry 3vdy: B. subtilis SsbB/ssDNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Bacillus subtilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-01-06
Authors: Yadav, T., Carrasco, B., Myers, A.R., George, N.P., Keck, J.L., Alonso, J.C.
PDB entry 3vdz: Tailoring Encodable Lanthanide-Binding Tags as MRI Contrast Agents: xq-dSE3-Ubiquitin at 2.4 Angstroms
Classification: METAL BINDING PROTEIN, DE NOVO DESIGN
Source organism: synthetic construct, homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-01-06
Authors: Daughtry, K.D., Martin, L.J., Surraju, A., Imperiali, B., Allen, K.N.
PDB entry 3ve0: Crystal structure of Sudan Ebolavirus Glycoprotein (strain Boniface) bound to 16F6
Classification: Immune system/viral protein
Source organism: Mus musculus; Sudan ebolavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.353 Å
Deposited: 2012-01-06
Authors: Saphire, E.O., Bale, S., Dias, J.M.
PDB entry 3ve1: The 2.9 angstrom crystal structure of Transferrin binding protein B (TbpB) from serogroup B M982 Neisseria meningitidis in complex with human transferrin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Neisseria meningitidis serogroup B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.956 Å
Deposited: 2012-01-06
Authors: Calmettes, C., Moraes, T.F.
PDB entry 3ve2: The 2.1 angstrom crystal structure of Transferrin binding protein B (TbpB) from serogroup B M982 Neisseria meningitidis
Classification: Transferrin-binding protein
Source organism: Neisseria meningitidis serogroup B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2012-01-06
Authors: Calmettes, C., Moraes, T.F.
PDB entry 3ve3: Structure of IT Intermediate from time-resolved laue crystallography
Classification: LUMINESCENT PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-01-07
Authors: Ihee, H., Jung, Y.O.
PDB entry 3ve4: Structures of ICT and PR1 intermediates from time-resolved laue crystallography
Classification: LUMINESCENT PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-01-07
Authors: Ihee, H., Jung, Y.O.
PDB entry 3ve5: Structure of recombination mediator protein RecR16-196 deletion mutant
Classification: RECOMBINATION
Source organism: Thermoanaerobacter tengcongensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-01-07
Authors: Tang, Q., Yan, X.X., Liang, D.C.
PDB entry 3ve6: Crystal Structure Analysis of Venezuelan Equine Encephalitis Virus Capsid Protein NLS and Importin Alpha
Classification: PROTEIN BINDING
Source organism: Mus musculus; Venezuelan equine encephalitis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.829 Å
Deposited: 2012-01-07
Authors: Fan, F.
PDB entry 3ve7: Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula complexed with inhibitor BMP
Classification: LYASE/LYASE INHIBITOR
Source organism: Metallosphaera sedula DSM 5348
Experimental method: X-RAY DIFFRACTION
Resolution: 1.539 Å
Deposited: 2012-01-07
Authors: Fedorov, A.A., Fedorov, E.V., Desai, B., Gerlt, J.A., Almo, S.C.
PDB entry 3ve9: Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula
Classification: LYASE
Source organism: Metallosphaera sedula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2012-01-07
Authors: Fedorov, A.A., Fedorov, E.V., Desai, B., Gerlt, J.A., Almo, S.C.
PDB entry 3vea: Crystal Structure of matP-matS23mer
Classification: DNA BINDING PROTEIN/DNA
Source organism: Yersinia pestis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2012-01-07
Authors: Schumacher, M.A.
PDB entry 3veb: Crystal Structure of Matp-matS
Classification: DNA BINDING PROTEIN/DNA
Source organism: Yersinia pestis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-01-07
Authors: Schumacher, M.A.
PDB entry 3vec: Rhodococcus jostii RHA1 DypB D153A variant in complex with heme
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-01-07
Authors: Grigg, J.C., Singh, R., Armstrong, Z., Eltis, L.D., Murphy, M.E.P.
PDB entry 3ved: Rhodococcus jostii RHA1 DypB D153H variant in complex with heme
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-01-07
Authors: Grigg, J.C., Singh, R., Armstrong, Z., Eltis, L.D., Murphy, M.E.P.
PDB entry 3vee: Rhodococcus jostii RHA1 DypB N246A variant in complex with heme
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-01-07
Authors: Grigg, J.C., Singh, R., Armstrong, Z., Eltis, L.D., Murphy, M.E.P.
PDB entry 3vef: Rhodococcus jostii RHA1 DypB N246H variant in complex with heme
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2012-01-07
Authors: Grigg, J.C., Singh, R., Armstrong, Z., Eltis, L.D., Murphy, M.E.P.
PDB entry 3veg: Rhodococcus jostii RHA1 DypB R244L variant in complex with heme
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-01-07
Authors: Grigg, J.C., Singh, R., Armstrong, Z., Eltis, L.D., Murphy, M.E.P.
PDB entry 3veh: Structure of a M. tuberculosis salicylate synthase, MbtI, in complex with an inhibitor methylAMT
Classification: lyase, isomerase
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-01-08
Authors: Bulloch, E.M., Chi, G., Manos-Turvey, A., Johnston, J.M., Baker, E.N., Payne, R.J., Lott, J.S., TB Structural Genomics Consortium (TBSGC)
PDB entry 3vej: Crystal structure of the Get5 carboxyl domain from S. cerevisiae
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2012-01-08
Authors: Chartron, J.W., Vandervelde, D.G., Rao, M., Clemons Jr., W.M.