LiteFold/PDB huggingface dataset:
PDB entry 3mek: Crystal Structure of Human Histone-Lysine N-methyltransferase SMYD3 in Complex with S-adenosyl-L-methionine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2010-03-31
Authors: Lam, R., Dombrovski, L., Li, Y., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Min, J., Wu, H., Structural Genomics Consortium (SGC)
PDB entry 3mel: Crystal Structure of Thiamin pyrophosphokinase family protein from Enterococcus faecalis, Northeast Structural Genomics Consortium Target EfR150
Classification: structural genomics, unknown function
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.788 Å
Deposited: 2010-03-31
Authors: Kuzin, A., Abasidze, M., Seetharaman, J., Mao, M., Xiao, R., Ciccosanti, C., Foote, E.L., Maglaqui, M., Zhao, L., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Snell, E.H., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3mem: Crystal structure of a Putative signal transduction protein (Maqu_0641) from MARINOBACTER AQUAEOLEI VT8 at 2.25 A resolution
Classification: SIGNALING PROTEIN
Source organism: Marinobacter aquaeolei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2010-03-31
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3men: Crystal structure of acetylpolyamine aminohydrolase from Burkholderia pseudomallei, iodide soak
Classification: HYDROLASE
Source organism: Burkholderia pseudomallei 1710b
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2010-03-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3mep: Crystal Structure of ECA2234 protein from Erwinia carotovora, Northeast Structural Genomics Consortium Target EwR44
Classification: structural genomics, unknown function
Source organism: Pectobacterium atrosepticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2010-03-31
Authors: Seetharaman, J., Abashidze, M., Forouhar, F., Mao, M., Xiao, R., Ciccosanti, C., Wang, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3meq: Crystal structure of alcohol dehydrogenase from Brucella melitensis
Classification: OXIDOREDUCTASE
Source organism: Brucella suis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2010-03-31
Authors: Arakaki, T.L., Staker, B.L., Gardberg, A., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3mer: Crystal Structure of the methyltransferase Slr1183 from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR145
Classification: structural genomics, unknown function
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2010-03-31
Authors: Seetharaman, J., Chen, Y., Forouhar, F., Rossi, P., Sahdev, S., Xiao, R., Ciccosanti, C., Foote, E.L., Belote, R.L., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3mes: Crystal structure of choline kinase from Cryptosporidium parvum Iowa II, cgd3_2030
Classification: TRANSFERASE
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2010-03-31
Authors: Qiu, W., Wernimont, A., Hills, T., Lew, J., Artz, J.D., Xiao, T., Allali-Hassani, A., Vedadi, M., Kozieradzki, I., Cossar, D., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Hui, R., Ma, D., Structural Genomics Consortium (SGC)
PDB entry 3met: Crystal structure of SGF29 in complex with H3K4me2
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2010-03-31
Authors: Bian, C.B., Xu, C., Lam, R., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A.M., Bochkarev, A., Min, J., Structural Genomics Consortium (SGC)
PDB entry 3meu: Crystal structure of SGF29 in complex with H3R2me2sK4me3
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2010-03-31
Authors: Bian, C.B., Xu, C., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A.M., Bochkarev, A., Min, J., Structural Genomics Consortium (SGC)
PDB entry 3mev: Crystal structure of SGF29 in complex with R2AK4me3
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2010-03-31
Authors: Bian, C.B., Xu, C., Lam, R., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A.M., Bochkarev, A., Min, J., Structural Genomics Consortium (SGC)
PDB entry 3mew: Crystal structure of Novel Tudor domain-containing protein SGF29
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2010-03-31
Authors: Xu, C., Bian, C.B., Lam, R., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A.M., Bochkarev, A., Min, J., Structural Genomics Consortium (SGC)
PDB entry 3mex: Crystal structure of MexR in oxidized state
Classification: Transcription, Transcription Regulation
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2010-04-01
Authors: Chen, H., Yi, C., Zhang, J., Zhang, W., Yang, C.-G., He, C.
PDB entry 3mey: Crystal structure of class II aaRS homologue (Bll0957) complexed with ATP
Classification: LIGASE
Source organism: Bradyrhizobium japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2010-04-01
Authors: Weygand-Durasevic, I., Mocibob, M., Ivic, N., Bilokapic, S., Maier, T., Luic, M., Ban, N.
PDB entry 3mez: X-ray structural analysis of a mannose specific lectin from dutch crocus (crocus vernus)
Classification: SUGAR BINDING PROTEIN
Source organism: Crocus vernus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2010-04-01
Authors: Akrem, A., Meyer, A., Perbandt, M., Voelter, W., Buck, F., Betzel, C.
PDB entry 3mf0: Crystal structure of PDE5A GAF domain (89-518)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2010-04-01
Authors: Wang, H., Robinson, H., Ke, H.
PDB entry 3mf1: Crystal structure of class II aaRS homologue (Bll0957) complexed with an analogue of glycyl adenylate
Classification: LIGASE
Source organism: Bradyrhizobium japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2010-04-01
Authors: Weygand-Durasevic, I., Mocibob, M., Ivic, N., Bilokapic, S., Maier, T., Luic, M., Ban, N.
PDB entry 3mf2: Crystal structure of class II aaRS homologue (Bll0957) complexed with AMP
Classification: LIGASE
Source organism: Bradyrhizobium japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2010-04-01
Authors: Weygand-Durasevic, I., Mocibob, M., Ivic, N., Bilokapic, S., Maier, T., Luic, M., Ban, N.
PDB entry 3mf3: Cobalt(II)-Substituted Haemophilus influenzae B-Carbonic Anhydrase
Classification: LYASE
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2010-04-01
Authors: Hoffmann, K.M., Rowlett, R.S.
PDB entry 3mf4: Crystal structure of putative two-component system response regulator/ggdef domain protein
Classification: SIGNALING PROTEIN
Source organism: Aeromonas salmonicida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2010-04-01
Authors: Malashkevich, V.N., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3mf5: Hepatitis C virus polymerase NS5B (BK) with amide bioisostere thumb site inhibitor
Classification: TRANSFERASE
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2010-04-01
Authors: Harris, S.F., Tavares, G., Ghate, M.
PDB entry 3mf6: Computationally designed endo-1,4-beta-xylanase
Classification: HYDROLASE
Source organism: Thermopolyspora flexuosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2010-04-01
Authors: Morin, A., Harp, J.M.
PDB entry 3mf7: Crystal Structure of (R)-oxirane-2-carboxylate inhibited cis-CaaD
Classification: HYDROLASE
Source organism: coryneform bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2010-04-01
Authors: Guo, Y., Serrano, H., Ernst, S.R., Johnson Jr., W.H., Hackert, M.L., Whitman, C.P.
PDB entry 3mf8: Crystal Structure of Native cis-CaaD
Classification: HYDROLASE
Source organism: coryneform bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2010-04-01
Authors: Guo, Y., Serrano, H., Ernst, S.R., Johnson Jr., W.H., Hackert, M.L., Whitman, C.P.
PDB entry 3mf9: Computationally designed endo-1,4-beta-xylanase
Classification: HYDROLASE
Source organism: Thermopolyspora flexuosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2010-04-01
Authors: Morin, A., Harp, J.M.
PDB entry 3mfa: Computationally designed endo-1,4-beta-xylanase
Classification: HYDROLASE
Source organism: Thermopolyspora flexuosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2010-04-01
Authors: Morin, A., Harp, J.M.
PDB entry 3mfb: Crystal Structure of the S-type Pyocin domain of ECA1669 protein from Erwinia carotovora, Northeast Structural Genomics Consortium Target EwR82C
Classification: Structural Genomics, Unknown function
Source organism: Erwinia carotovora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2010-04-01
Authors: Forouhar, F., Neely, H., Seetharaman, J., Sahdev, S., Xiao, R., Ciccosanti, C., Lee, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3mfc: Computationally designed end0-1,4-beta,xylanase
Classification: HYDROLASE
Source organism: Thermopolyspora flexuosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2010-04-01
Authors: Morin, A., Harp, J.M.
PDB entry 3mfd: The Structure of the Beta-lactamase superfamily domain of D-alanyl-D-alanine carboxypeptidase from Bacillus subtilis
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2010-04-01
Authors: Cuff, M.E., Rakowski, E., Buck, K., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3mfe: Crystal Structure of Mycobacterium Tuberculosis Proteasome open-gate mutant with H0 movement
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2010-04-02
Authors: Li, D., Li, H.
PDB entry 3mff: 1F1E8hu TCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2010-04-02
Authors: van Boxel, G.I., Holmes, S., Fugger, L., Jones, E.Y.
PDB entry 3mfg: Crystal structure of Toxic Shock Syndrome Toxin 1 (TSST-1) in complex with the human T cell receptor beta chain Vbeta2.1 (EP-8)
Classification: TOXIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2010-04-02
Authors: Bonsor, D.A., Sundberg, E.J.
PDB entry 3mfh: DNA Polymerase Eta in Complex With Undamaged DNA
Classification: TRANSFERASE/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2010-04-02
Authors: Silverstein, T.D., Johnson, R.E., Jain, R., Prakash, L., Prakash, S., Aggarwal, A.K.
PDB entry 3mfi: DNA Polymerase Eta in Complex With a cis-syn Thymidine Dimer
Classification: TRANSFERASE/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2010-04-02
Authors: Silverstein, T.D., Johnson, R.E., Jain, R., Prakash, L., Prakash, S., Aggarwal, A.K.
PDB entry 3mfj: Bovine trypsin at 0.8 A resolution, restrained refinement
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.8 Å
Deposited: 2010-04-02
Authors: Brzuszkiewicz, A., Dauter, M., Dauter, Z.
PDB entry 3mfk: Ets1 complex with stromelysin-1 promoter DNA
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2010-04-02
Authors: Babayeva, N.D., Mino, K., Tahirov, T.H.
PDB entry 3mfl: Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2010-04-02
Authors: Purpero, V.M., Lipscomb, J.D.
PDB entry 3mfm: Crystal Structures and Mutational Analyses of Acyl-CoA Carboxylase Subunit of Streptomyces coelicolor
Classification: LIGASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2010-04-02
Authors: Diacovich, L., Arabolaza, A., Shillito, E.M., Lin, T.-W., Mitchell, D.L., Melgar, M.M.
PDB entry 3mfn: Dfer_2879 protein of unknown function from Dyadobacter fermentans
Classification: Structural Genomics, Unknown function
Source organism: Dyadobacter fermentans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2010-04-02
Authors: Osipiuk, J., Xu, X., Cui, H., Chin, S., Eisen, J., Wu, D., Kerfeld, C., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3mfp: Atomic model of F-actin based on a 6.6 angstrom resolution cryoEM map
Classification: CONTRACTILE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.6 Å
Deposited: 2010-04-03
Authors: Fujii, T., Iwane, A.H., Yanagida, T., Namba, K.
PDB entry 3mfq: A Glance into the Metal Binding Specificity of TroA: Where Elaborate Behaviors Occur in the Active Center
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus suis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.598 Å
Deposited: 2010-04-03
Authors: Gao, G.F., Zheng, B., Zhang, Q., Gao, J., Han, H., Li, M.
PDB entry 3mfr: CASK-4M CaM Kinase Domain, native
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2010-04-03
Authors: Wahl, M.C., Mukherjee, K.
PDB entry 3mfs: CASK-4M CaM Kinase Domain, AMPPNP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2010-04-03
Authors: Wahl, M.C., Mukherjee, K.
PDB entry 3mft: CASK-4M CaM Kinase Domain, Mn2+
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2010-04-03
Authors: Wahl, M.C., Mukherjee, K.
PDB entry 3mfu: CASK-4M CaM Kinase Domain, AMPPNP-Mn2+
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2010-04-03
Authors: Wahl, M.C., Mukherjee, K.
PDB entry 3mfv: Crystal structure of human arginase I in complex with 2-aminohomohistidine
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2010-04-04
Authors: Di Costanzo, L., Christianson, D.W.
PDB entry 3mfw: Crystal structure of human arginase I in complex with L-2-aminohistidine and sulphate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2010-04-04
Authors: Di Costanzo, L., Christianson, D.W.
PDB entry 3mfx: Crystal Structure of the sensory box domain of the sensory-box/GGDEF protein SO_1695 from Shewanella oneidensis, Northeast Structural Genomics Consortium Target SoR288B
Classification: TRANSCRIPTION
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2010-04-04
Authors: Forouhar, F., Abashidze, M., Seetharaman, J., Mao, M., Xiao, R., Ciccosanti, C., Lee, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3mfy: Structural characterization of the subunit A mutant F236A of the A-ATP synthase from Pyrococcus horikoshii
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2010-04-05
Authors: Balakrishna, A.M., Kumar, A., Manimekali, M.S.S., Jeyakanthan, J., Gruber, G.
PDB entry 3mg0: Structure of yeast 20S proteasome with bortezomib
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2010-04-05
Authors: Sintchak, M.D.
PDB entry 3mg1: Crystal structure of the orange carotenoid protein from cyanobacteria Synechocystis sp. PCC 6803
Classification: CAROTENOID BINDING PROTEIN
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.649 Å
Deposited: 2010-04-05
Authors: Wilson, A., Kinney, J., Zwart, P.H., Punginelli, C., D'Haen, S., Perreau, F., Klein, M.G., Kirilovsky, D., Kerfeld, C.A.
PDB entry 3mg2: Crystal structure of the orange carotenoid protein Y44S mutant from cyanobacteria synechocystis sp. PCC 6803
Classification: CAROTENOID BINDING PROTEIN
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.653 Å
Deposited: 2010-04-05
Authors: Wilson, A., Kinney, J., Zwart, P.H., Punginelli, C., D'Haen, S., Perreau, F., Klein, M.G., Kirilovsky, D., Kerfeld, C.A.
PDB entry 3mg3: Crystal structure of the orange carotenoid protein R155L mutant from cyanobacteria synechocystis sp. PCC 6803
Classification: CAROTENOID BINDING PROTEIN
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.702 Å
Deposited: 2010-04-05
Authors: Wilson, A., Kinney, J., Zwart, P.H., Punginelli, C., D'Haen, S., Perreau, F., Klein, M.G., Kirilovsky, D., Kerfeld, C.A.
PDB entry 3mg4: Structure of yeast 20S proteasome with Compound 1
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2010-04-05
Authors: Sintchak, M.D.
PDB entry 3mg5: Core-streptavidin mutant F130L in complex with biotin
Classification: BIOTIN-BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2010-04-05
Authors: Le Trong, I., Baugh, L., Stayton, P.S., Lybrand, T.P., Stenkamp, R.E.
PDB entry 3mg6: Structure of yeast 20S open-gate proteasome with Compound 6
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2010-04-05
Authors: Sintchak, M.D.
PDB entry 3mg7: Structure of yeast 20S open-gate proteasome with Compound 8
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2010-04-05
Authors: Sintchak, M.D.
PDB entry 3mg8: Structure of yeast 20S open-gate proteasome with Compound 16
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2010-04-05
Authors: Sintchak, M.D.
PDB entry 3mg9: Teg 12 Binary Structure Complexed with the Teicoplanin Aglycone
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: NONOMURAEA SP. ATCC 39727; UNCULTURED SOIL BACTERIUM
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2010-04-05
Authors: Bick, M.J., Banik, J.J., Darst, S.A., Brady, S.F.
PDB entry 3mga: 2.4 Angstrom Crystal Structure of Ferric Enterobactin Esterase (fes) from Salmonella typhimurium
Classification: HYDROLASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2010-04-05
Authors: Minasov, G., Wawrzak, Z., Skarina, T., Onopriyenko, O., Papazisi, L., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3mgb: Teg 12 Ternary Structure Complexed with PAP and the Teicoplanin Aglycone
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: NONOMURAEA SP. ATCC 39727; UNCULTURED SOIL BACTERIUM
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2010-04-05
Authors: Bick, M.J., Banik, J.J., Darst, S.A., Brady, S.F.
PDB entry 3mgc: Teg12 Apo
Classification: TRANSFERASE
Source organism: uncultured soil bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2010-04-05
Authors: Bick, M.J., Banik, J.J., Darst, S.A., Brady, S.F.
PDB entry 3mgd: Crystal Structure of predicted acetyltransferase with acetyl-CoA from Clostridium acetobutylicum at the resolution 1.9A, Northeast Structural Genomics Consortium Target CaR165
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2010-04-05
Authors: Kuzin, A., Chen, Y., Seetharaman, J., Sahdev, S., Xiao, R., Ciccosanti, C., Zhao, L., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3mge: X-ray Structure of Hexameric HIV-1 CA
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2010-04-05
Authors: Pornillos, O.
PDB entry 3mgf: Crystal Structure of Monomeric Kusabira-Orange (MKO), Orange-Emitting GFP-like Protein, at pH 7.5
Classification: FLUORESCENT PROTEIN
Source organism: Verrillofungia concinna
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2010-04-06
Authors: Ebisawa, T., Yamamura, A., Ohtsuka, J., Kameda, Y., Hayakawa, K., Nagata, K., Tanokura, M.
PDB entry 3mgg: Crystal Structure of Methyl Transferase from Methanosarcina mazei
Classification: TRANSFERASE
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2010-04-06
Authors: Syed Ibrahim, B., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3mgh: Binary complex of a DNA polymerase lambda loop mutant
Classification: Lyase,Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2010-04-06
Authors: Garcia-Diaz, M., Bebenek, K., Zhou, R.Z., Povirk, L.F., Kunkel, T.
PDB entry 3mgi: Ternary complex of a DNA polymerase lambda loop mutant
Classification: Lyase,Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.603 Å
Deposited: 2010-04-06
Authors: Garcia-Diaz, M., Bebenek, K., Zhou, R.Z., Povirk, L.F., Kunkel, T.
PDB entry 3mgj: Crystal structure of the Saccharop_dh_N domain of MJ1480 protein from Methanococcus jannaschii. Northeast Structural Genomics Consortium Target MjR83a.
Classification: structural genomics, unknown function
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.703 Å
Deposited: 2010-04-06
Authors: Vorobiev, S., Neely, H., Seetharaman, J., Lee, D., Patel, D., Ciccosanti, C., Xiao, R., Acton, T.B., Everett, J.K., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3mgk: CRYSTAL STRUCTURE OF PROBABLE PROTEASE/AMIDASE FROM Clostridium acetobutylicum ATCC 824
Classification: structural genomics, unknown function
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2010-04-06
Authors: Patskovsky, Y., Toro, R., Freeman, J., Iizuka, M., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3mgl: Crystal structure of permease family protein from Vibrio cholerae
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2010-04-06
Authors: Chang, C., Marshall, N., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3mgm: Crystal structure of human NUDT16
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2010-04-07
Authors: Yan, J., Lu, G., Zhang, J., Qi, J., Li, Z., Gao, F.
PDB entry 3mgn: D-Peptide inhibitor PIE71 in complex with IQN17
Classification: VIRAL PROTEIN/VIRAL PROTEIN inhibitor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2010-04-07
Authors: Hill, C.P., Whitby, F.G., Kay, M., Francis, N.
PDB entry 3mgo: Crystal structure of a H5-specific CTL epitope derived from H5N1 influenza virus in complex with HLA-A*0201
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.297 Å
Deposited: 2010-04-07
Authors: Sun, Y., Liu, J., Yang, M., Gao, F., Zhou, J., Kitamura, Y.
PDB entry 3mgp: Binding of Cobalt ions to the Nucleosome Core Particle
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2010-04-07
Authors: Mohideen, K., Muhammad, R., Davey, C.A.
PDB entry 3mgq: Binding of Nickel ions to the Nucleosome Core Particle
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2010-04-07
Authors: Mohideen, K., Muhammad, R., Davey, C.A.
PDB entry 3mgr: Binding of Rubidium ions to the Nucleosome Core Particle
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2010-04-07
Authors: Mohideen, K., Muhammad, R., Davey, C.A.
PDB entry 3mgs: Binding of Cesium ions to the Nucleosome Core particle
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2010-04-07
Authors: Mohideen, K., Muhammad, R., Davey, C.A.
PDB entry 3mgt: Crystal structure of a H5-specific CTL epitope variant derived from H5N1 influenza virus in complex with HLA-A*0201
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.197 Å
Deposited: 2010-04-07
Authors: Sun, Y., Liu, J., Yang, M., Gao, F., Zhou, J., Kitamura, Y.
PDB entry 3mgu: Structure of S. cerevisiae Tpa1 protein, a proline hydroxylase modifying ribosomal protein Rps23
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2010-04-07
Authors: Henri, J., Rispal, D., Bayart, E., van Tilbeurgh, H., Seraphin, B., Graille, M.
PDB entry 3mgv: Cre recombinase-DNA transition state
Classification: ISOMERASE/DNA
Source organism: Enterobacteria phage P1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2010-04-07
Authors: Gibb, B.P., Gupta, K., Ghosh, K., Sharp, R., Chen, J., Van Duyne, G.D.
PDB entry 3mgw: Thermodynamics and structure of a salmon cold-active goose-type lysozyme
Classification: HYDROLASE
Source organism: Salmo salar
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2010-04-07
Authors: Kyomuhendo, P., Myrnes, B., Brandsdal, B.O., Smalas, A.O., Nilsen, I.W., Helland, R.
PDB entry 3mgx: Crystal Structure of P450 OxyD that is involved in the Biosynthesis of Vancomycin-type Antibiotics
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis balhimycina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2010-04-07
Authors: Cryle, M.J., Schlichting, I.
PDB entry 3mgy: Mutagenesis of p38 MAP Kinase eshtablishes key roles of Phe169 in function and structural dynamics and reveals a novel DFG-out state
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2010-04-07
Authors: Namboodiri, H.V., Karpusas, M., Bukhtiyarova, M., Springman, E.B.
PDB entry 3mgz: Crystal structure of DHBPS domain of bi-functional DHBPS/GTP cyclohydrolase II from Mycobacterium tuberculosis at pH 4.0
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2010-04-07
Authors: Singh, M., Kumar, P., Karthikeyan, S.
PDB entry 3mh0: Mutagenesis of p38 MAP Kinase eshtablishes key roles of Phe169 in function and structural dynamics and reveals a novel DFG-out state
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2010-04-07
Authors: Namboodiri, H.V., Karpusas, M., Bukhtiyarova, M., Springman, E.B.
PDB entry 3mh1: Mutagenesis of p38 MAP kinase establishes key roles of Phe169 in function and structural dynamics and reveals a novel DFG-out state
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2010-04-07
Authors: Namboodiri, H.V., Karpusas, M., Bukhtiyarova, M., Springman, E.B.
PDB entry 3mh2: Mutagenesis of p38 MAP kinase establishes key roles of Phe169 in function and structural dynamics and reveals a novel DFG-out state
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2010-04-07
Authors: Namboodiri, H.V., Karpusas, M., Bukhtiyarova, M., Springman, E.B.
PDB entry 3mh3: Mutagenesis of p38 MAP kinase establishes key roles of Phe169 in function and structural dynamics and reveals a novel DFG-out state
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2010-04-07
Authors: Namboodiri, H.V., Karpusas, M., Bukhtiyarova, M., Springman, E.B.
PDB entry 3mh4: HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2010-04-07
Authors: Krojer, T., Sawa, J., Huber, R., Clausen, T.
PDB entry 3mh5: HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2010-04-07
Authors: Krojer, T., Sawa, J., Huber, R., Clausen, T.
PDB entry 3mh6: HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2010-04-07
Authors: Krojer, T., Sawa, J., Huber, R., Clausen, T.
PDB entry 3mh7: HtrA proteases are activated by a conserved mechanism that can be triggered by distinct molecular cues
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.961 Å
Deposited: 2010-04-07
Authors: Krojer, T., Sawa, J., Huber, R., Clausen, T.
PDB entry 3mh8: Crystal structure of LprG from Mycobacterium tuberculosis
Classification: LIPID BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.995 Å
Deposited: 2010-04-07
Authors: Tsai, H.-C., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 3mh9: Crystal structure of LprG mutant V91W from Mycobacterium tuberculosis
Classification: LIPID BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.794 Å
Deposited: 2010-04-07
Authors: Tsai, H.-C., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 3mha: Crystal structure of LprG from Mycobacterium tuberculosis bound to PIM
Classification: LIPID BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2010-04-07
Authors: Tsai, H.-C., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 3mhb: Crystal structure of Staphylococcal nuclease variant Delta+PHS L38A at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2010-04-07
Authors: Caro, J.A., Schlessman, J.L., Garcia-Moreno, E.B., Heroux, A.
PDB entry 3mhc: Crystal structure of human cabonic anhydrase II in adduct with an adamantyl analogue of acetazolamide in a novel hydrophobic binding pocket
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2010-04-07
Authors: Avvaru, B.S.
PDB entry 3mhd: Crystal structure of DCR3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.901 Å
Deposited: 2010-04-07
Authors: Zhan, C., Patskovsky, Y., Yan, Q., Li, Z., Ramagopal, U.A., Nathenson, S.G., Almo, S.C.
PDB entry 3mhe: Crystal Structure of Ketosteroid Isomerase P39A from Pseudomonas Testosteroni (tKSI)
Classification: ISOMERASE
Source organism: Comamonas testosteroni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.722 Å
Deposited: 2010-04-07
Authors: Gonzalez, A., Tsai, Y., Schwans, J., Sunden, F., Herschlag, D.
PDB entry 3mhf: Tagatose-1,6-bisphosphate aldolase from Streptococcus pyogenes
Classification: LYASE
Source organism: Streptococcus pyogenes serotype M1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2010-04-07
Authors: LowKam, C.
PDB entry 3mhg: Dihydroxyacetone phosphate carbanion intermediate in tagatose-1,6-bisphosphate aldolase from Streptococcus pyogenes
Classification: LYASE
Source organism: Streptococcus pyogenes serotype M1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2010-04-07
Authors: LowKam, C., Liotard, B.
PDB entry 3mhh: Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module
Classification: Hydrolase/transcription
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2010-04-08
Authors: Samara, N.L., Datta, A.B., Berndsen, C.E., Zhang, X., Yao, T., Cohen, R.E., Wolberger, C.
PDB entry 3mhi: Crystal structure of human carbonic anhydrase isozyme II with 4-{[(5-nitro-6-oxo-1,6-dihydro-4-pyrimidinyl)amino]methyl}benzenesulfonamide
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2010-04-08
Authors: Grazulis, S., Manakova, E., Golovenko, D.
PDB entry 3mhj: Human tankyrase 2 - catalytic PARP domain in complex with 1-methyl-3-(trifluoromethyl)-5h-benzo[c][1,8]naphtyridine-6-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2010-04-08
Authors: Karlberg, T., Schutz, P., Arrowsmith, C.H., Berglund, H., Bountra, C., Collins, R., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, I., Kotenyova, T., Markova, N., Moche, M., Nordlund, P., Nyman, T., Persson, C., Siponen, M.I., Svensson, L., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Weigelt, J., Welin, M., Wisniewska, M., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3mhk: Human tankyrase 2 - catalytic PARP domain in complex with 2-(2-pyridyl)-7,8-dihydro-5h-thiino[4,3-d]pyrimidin-4-ol
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2010-04-08
Authors: Karlberg, T., Schutz, P., Arrowsmith, C.H., Berglund, H., Bountra, C., Collins, R., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, I., Kotenyova, T., Markova, N., Moche, M., Nordlund, P., Nyman, T., Persson, C., Siponen, M.I., Svensson, L., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Weigelt, J., Welin, M., Wisniewska, M., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3mhl: Crystal structure of human carbonic anhydrase isozyme II with 4-{[N-(6-methoxy-5-nitropyrimidin-4-yl)amino]methyl}benzenesulfonamide
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2010-04-08
Authors: Grazulis, S., Manakova, E., Golovenko, D.
PDB entry 3mhm: Crystal structure of human carbonic anhydrase isozyme II with 4-{[N-(6-benzylamino-5-nitropyrimidin-4-yl)amino]methyl}benzenesulfonamide
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2010-04-08
Authors: Grazulis, S., Manakova, E., Golovenko, D.
PDB entry 3mho: Crystal structure of human carbonic anhydrase isozyme II with 4-[N-(6-chloro-5-formyl-2-methylthiopyrimidin-4-yl)amino]benzenesulfonamide
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2010-04-08
Authors: Grazulis, S., Manakova, E., Golovenko, D., Sukackaite, R.
PDB entry 3mhp: FNR-recruitment to the thylakoid
Classification: OXIDOREDUCTASE
Source organism: Pisum sativum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2010-04-08
Authors: Groll, M., Alte, F., Soll, J., Boelter, B.
PDB entry 3mhr: 14-3-3 sigma in complex with YAP pS127-peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2010-04-08
Authors: Schumacher, B., Skwarczynska, M., Rose, R., Ottmann, C.
PDB entry 3mhs: Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to ubiquitin aldehyde
Classification: Hydrolase/transcription regulator/protein binding
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2010-04-08
Authors: Samara, N.L., Datta, A.B., Berndsen, C.E., Zhang, X., Yao, T., Cohen, R.E., Wolberger, C.
PDB entry 3mht: TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH UNMODIFIED DNA AND ADOHCY
Classification: TRANSFERASE/DNA
Source organism: Haemophilus haemolyticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 1996-07-24
Authors: O'Gara, M., Klimasauskas, S., Roberts, R.J., Cheng, X.
PDB entry 3mhu: Crystal structure of dihydroorotate dehydrogenase from Leishmania major in complex with 5-Nitroorotic acid
Classification: OXIDOREDUCTASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2010-04-08
Authors: Pinheiro, M.P., Rocha, J.R., Cheleski, J., Montanari, C.A., Nonato, M.C.
PDB entry 3mhv: Crystal Structure of Vps4 and Vta1
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2010-04-09
Authors: Yang, D., Hurley, J.H.
PDB entry 3mhw: The complex crystal Structure of Urokianse and 2-Aminobenzothiazole
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2010-04-09
Authors: Jiang, L.-G., Yuan, C., Chen, L.-Q., Huang, M.-D.
PDB entry 3mhx: Crystal Structure of Stenotrophomonas maltophilia FeoA complexed with Zinc: A Unique Procaryotic SH3 Domain Protein Possibly Acting as a Bacterial Ferrous Iron Transport Activating Factor
Classification: METAL TRANSPORT
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2010-04-09
Authors: Chou, S.-H., Su, Y.-C., Chin, K.-H., Hung, H.-C., Shen, G.-H., Wang, A.H.-J.
PDB entry 3mhy: A New PII Protein Structure
Classification: SIGNALING PROTEIN
Source organism: Azospirillum brasilense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2010-04-09
Authors: Winkler, F.K., Truan, D., Li, X.D.
PDB entry 3mhz: 1.7A structure of 2-fluorohistidine labeled Protective Antigen
Classification: TOXIN
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2010-04-09
Authors: Lovell, S., Battaile, K.P., Wimalasena, D.S., Janowiak, B.E., Miyagi, M., Sun, J., Hajduch, J., Pooput, C., Kirk, K.L., Bann, J.G.
PDB entry 3mi0: Crystal Structure of Mycobacterium Tuberculosis Proteasome at 2.2 A
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2010-04-09
Authors: Li, D., Li, H.
PDB entry 3mi1: Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2010-04-09
Authors: Purpero, V.M., Lipscomb, J.D.
PDB entry 3mi2: Crystal structure of human orotidine-5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2010-04-09
Authors: Liu, Y., To, T., Kotra, L.P., Pai, E.F.
PDB entry 3mi3: Homocitrate Synthase Lys4 bound to Lysine
Classification: Amino-acid biosynthesis, lysine biosynthesis, Transferase
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2010-04-09
Authors: Bulfer, S.L., Scott, E.M., Pillus, L., Trievel, R.C.
PDB entry 3mi4: Bovine trypsin at 0.8 A resolution, non-restrained refinement
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.8 Å
Deposited: 2010-04-09
Authors: Brzuszkiewicz, A., Dauter, M., Dauter, Z.
PDB entry 3mi5: Axial Ligand Swapping In Double Mutant Maintains Intradiol-cleavage Chemistry in Protocatechuate 3,4-Dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2010-04-09
Authors: Purpero, V.M., Lipscomb, J.D.
PDB entry 3mi6: Crystal structure of the alpha-galactosidase from Lactobacillus brevis, Northeast Structural Genomics Consortium Target LbR11.
Classification: HYDROLASE
Source organism: Lactobacillus brevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.704 Å
Deposited: 2010-04-09
Authors: Vorobiev, S., Chen, Y., Seetharaman, J., Belote, R., Sahdev, S., Xiao, R., Acton, T.B., Everett, J.K., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3mi7: An Enhanced Repressor of Human Papillomavirus E2 Protein
Classification: VIRAL PROTEIN
Source organism: Human papillomavirus type 16
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2010-04-09
Authors: Bohm, A., Baleja, J., Bose, K., Meinke, G.
PDB entry 3mi8: The structure of TL1A-DCR3 COMPLEX
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.951 Å
Deposited: 2010-04-09
Authors: Zhan, C., Patskovsky, Y., Yan, Q., Li, Z., Ramagopal, U.A., Nathenson, S.G., Almo, S.C.
PDB entry 3mi9: Crystal structure of HIV-1 Tat complexed with human P-TEFb
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2010-04-09
Authors: Tahirov, T.H., Babayeva, N.D., Varzavand, K., Cooper, J.J., Sedore, S.C., Price, D.H.
PDB entry 3mia: Crystal structure of HIV-1 Tat complexed with ATP-bound human P-TEFb
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2010-04-09
Authors: Tahirov, T.H., Babayeva, N.D., Varzavand, K., Cooper, J.J., Sedore, S.C., Price, D.H.
PDB entry 3mib: Oxidized (Cu2+) peptidylglycine alpha-hydroxylating monooxygenase (PHM) with bound nitrite
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2010-04-10
Authors: Chufan, E.E., Eipper, B.A., Mains, R.E., Amzel, L.M.
PDB entry 3mic: Oxidized (Cu2+) peptidylglycine alpha-hydroxylating monooxygenase (PHM) with bound azide obtained by co-crystallization
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2010-04-10
Authors: Chufan, E.E., Eipper, B.A., Mains, R.E., Amzel, L.M.
PDB entry 3mid: Oxidized (Cu2+) peptidylglycine alpha-hydroxylating monooxygenase (PHM) with bound azide obtained by soaking (100mM NaN3)
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2010-04-10
Authors: Chufan, E.E., Eipper, B.A., Mains, R.E., Amzel, L.M.
PDB entry 3mie: Oxidized (Cu2+) peptidylglycine alpha-hydroxylating monooxygenase (PHM) with bound azide obtained by soaking (50mM NaN3)
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.26 Å
Deposited: 2010-04-10
Authors: Chufan, E.E., Eipper, B.A., Mains, R.E., Amzel, L.M.
PDB entry 3mif: Oxidized (Cu2+) peptidylglycine alpha-hydroxylating monooxygenase (PHM) with bound carbon monooxide (CO)
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2010-04-10
Authors: Siebert, X., Chufan, E., Eipper, B.A., Mains, R.E., Amzel, L.M.
PDB entry 3mig: Oxidized (Cu2+) peptidylglycine alpha-hydroxylating monooxygenase (PHM) with bound nitrite, obtained in the presence of substrate
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2010-04-10
Authors: Chufan, E.E., Eipper, B.A., Mains, R.E., Amzel, L.M.
PDB entry 3mih: Oxidized (Cu2+) peptidylglycine alpha-hydroxylating monooxygenase (PHM) with bound azide, obtained in the presence of substrate
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2010-04-10
Authors: Chufan, E.E., Eipper, B.A., Mains, R.E., Amzel, L.M.
PDB entry 3mii: Crystal structure of Y0R391Cp/HSP33 from Saccharomyces cerevisiae
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2010-04-10
Authors: Guo, P.-C., Zhou, Y.-Y., Zhou, C.-Z., Li, W.-F.
PDB entry 3mij: Crystal structure of a telomeric RNA G-quadruplex complexed with an acridine-based ligand.
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2010-04-10
Authors: Collie, G.W., Neidle, S., Parkinson, G.N.
PDB entry 3mil: Crystal structure of isoamyl acetate-hydrolyzing esterase from Saccharomyces cerevisiae
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2010-04-11
Authors: Ma, J., Lu, Q., Yuan, Y., Li, K., Ge, H., Go, Y., Niu, L., Teng, M.
PDB entry 3min: NITROGENASE MOFE PROTEIN FROM AZOTOBACTER VINELANDII, OXIDIZED STATE
Classification: NITROGEN FIXATION
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 1996-12-20
Authors: Peters, J.W., Stowell, M.H.B., Soltis, S.M., Day, M.W., Kim, J., Rees, D.C.
PDB entry 3mio: Crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase domain from Mycobacterium tuberculosis at pH 6.00
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2010-04-11
Authors: Singh, M., Karthikeyan, S.
PDB entry 3mip: I-MsoI re-designed for altered DNA cleavage specificity (-8GCG)
Classification: DE NOVO PROTEIN/DNA
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2010-04-11
Authors: Taylor, G.K., Stoddard, B.L.
PDB entry 3mis: I-MsoI re-designed for altered DNA cleavage specificity (-8G)
Classification: DE NOVO PROTEIN/DNA
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2010-04-12
Authors: Taylor, G.K., Stoddard, B.L.
PDB entry 3mit: Structure of Banana lectin-alpha-D-mannose complex
Classification: SUGAR BINDING PROTEIN
Source organism: Musa acuminata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2010-04-12
Authors: Sharma, A., Vijayan, M.