LiteFold/PDB huggingface dataset:
PDB entry 8rrn: Crystal structure of the SARS-CoV-2 S RBD in complex with pT1616 Fab
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2024-01-23
Authors: Hansen, G., Krey, T.
PDB entry 8rro: G12V-TCR complex with HLA-A3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2024-01-23
Authors: Sim, M.J.W., Sun, P.D.
PDB entry 8rrp: Insulin Icodec - A14E B16H B25H B29Ne-C20 diacid-LgGlu-2xAdo desB30 human insulin
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-01-23
Authors: Schluckebier, G., Johansson, E.
PDB entry 8rrq: Crystal structure of human SYK in complex with compound 24
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-01-23
Authors: Canevari, G.
PDB entry 8rrr: Alpha-synuclein amyloid fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-01-23
Authors: Saibil, H.R., Monistrol, J.
PDB entry 8rrs: Structure of mouse RyR2 solubilised in detergent in open state in complex with Ca2+, ATP, caffeine and Nb9657.
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-01-23
Authors: Li, C., Efremov, R.G.
PDB entry 8rrt: Structure of rabbit RyR1 reconstituted into lipid liposomes in open state in complex with FKBP and Nb9657
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2024-01-23
Authors: Li, C., Efremov, R.G.
PDB entry 8rru: Structure of RyR1 reconstituted into lipid liposomes in primed state in complex with FKBP and Nb9657.
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2024-01-23
Authors: Li, C., Efremov, R.G.
PDB entry 8rrv: Structure of RyR1 in detergent in close state in complex with FKBP and Nb9657.
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-23
Authors: Li, C., Efremov, R.G.
PDB entry 8rrw: Structure of RyR1 in detergent in open state in complex with FKBP and Nb9657.
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-01-23
Authors: Li, C., Efremov, R.G.
PDB entry 8rrx: Structure of RyR1 reconstituted into lipid nanodisc in primed state in complex with Ca2+, ATP, caffeine and Nb9657
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-23
Authors: Li, C., Efremov, R.G.
PDB entry 8rry: Crystal structure of copper-loaded SmAA10
Classification: OXIDOREDUCTASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45561 Å
Deposited: 2024-01-24
Authors: Munzone, A., Pujol, M., Reglier, M., Royant, A., Simaan, A.J., Decroos, C.
PDB entry 8rrz: Crystal structure of SYK kinase in complex with compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-01-24
Authors: Canevari, G.
PDB entry 8rs0: Structure of RyR1 in detergent in primed state in complex with nanobody and FKBP
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-24
Authors: Li, C., Efremov, R.G.
PDB entry 8rs1: CTX-M-14 measured via serial crystallography from a kapton HARE-chip (125 micron)
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2024-01-24
Authors: Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., Sung, S., von Stetten, D., Mehrabi, P., Schulz, E.C.
PDB entry 8rs2: Thaumatin measured via serial crystallography from a silicon HARE-chip.
Classification: SUGAR BINDING PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-24
Authors: Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., Sihyun, S., von Stetten, D., Mehrabi, P., Schulz, E.C.
PDB entry 8rs3: Thaumatin measured via serial crystallography from a kapton HARE-chip (50 micron)
Classification: SUGAR BINDING PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-24
Authors: Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., Sung, S., von Stetten, D., Mehrabi, P., Schulz, E.C.
PDB entry 8rs4: Flavin-dependent tryptophan 6-halogenase Thal in complex with tryptoline
Classification: FLAVOPROTEIN
Source organism: Streptomyces albogriseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-01-24
Authors: Bork, S., Niemann, H.H.
PDB entry 8rs5: Crystal structure of Methanopyrus kandleri malate dehydrogenase mutant 4
Classification: OXIDOREDUCTASE
Source organism: Methanopyrus kandleri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-01-24
Authors: Coquille, S., Engilberge, S., Madern, D.
PDB entry 8rs6: Crystal structure of Zika Virus NS2B-NS3 protease in complex with compound 1
Classification: HYDROLASE
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-01-24
Authors: Ontoria, J.M., Torrente, E.
PDB entry 8rs7: Crystal structure of Zika Virus NS2B-NS3 protease in complex with an allosteric inhibitor
Classification: HYDROLASE
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å
Deposited: 2024-01-24
Authors: Ontoria, J.M., Torrente, E.
PDB entry 8rs8: Crystal structure of BRCA1 BRCTs in complex with a RIF1 phosphopeptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2024-01-24
Authors: Day, M., Pearl, L.H., Oliver, A.W.
PDB entry 8rs9: p97 (VCP) double mutant - F266A F539A
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-01-24
Authors: Arie, M., Matzov, D., Karmona, R., Szenkier, N., Stanhill, A., Navon, A.
PDB entry 8rsa: CRYSTAL STRUCTURE OF TWO COVALENT NUCLEOSIDE DERIVATIVES OF RIBONUCLEASE A
Classification: HYDROLASE (PHOSPHORIC DIESTER)
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1989-08-28
Authors: Nachman, J., Wlodawer, A.
PDB entry 8rsb: p97 (VCP) mutant - F539A ADP state
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-01-24
Authors: Arie, M., Matzov, D., Karmona, R., Szenkier, N., Stanhill, A., Navon, A.
PDB entry 8rsc: p97 (VCP) mutant - F539A
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-01-24
Authors: Arie, M., Matzov, D., Karmona, R., Szenkier, N., Stanhill, A., Navon, A.
PDB entry 8rsd: Thaumatin measured via serial crystallography from a kapton HARE-chip (125 micron)
Classification: SUGAR BINDING PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-24
Authors: Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., Sung, S., von Stetten, D., Mehrabi, P., Schulz, E.C.
PDB entry 8rse: Proteinase K measured via serial crystallography from a silicon HARE-chip
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-01-24
Authors: Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., Sung, S., von Stetten, D., Mehrabi, P., Schulz, E.C.
PDB entry 8rsf: Proteinase K measured via serial crystallography from a kapton HARE-chip (50 micron)
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-01-24
Authors: Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., Sung, S., von Stetten, D., Mehrabi, P., Schulz, E.C.
PDB entry 8rsg: Proteinase K measured via serial crystallography from a kapton HARE-chip (125 micron)
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-01-24
Authors: Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., Sung, S., von Stetten, D., Mehrabi, P., Schulz, E.C.
PDB entry 8rsh: Lysozyme measured via serial crystallography from a silicon HARE chip
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-24
Authors: Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., Sung, S., von Stetten, D., Mehrabi, P., Schulz, E.C.
PDB entry 8rsi: Crystal structure of Methanobrevibacter oralis macrodomain
Classification: HYDROLASE
Source organism: Methanobrevibacter oralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.059 Å
Deposited: 2024-01-24
Authors: Ariza, A.
PDB entry 8rsj: Crystal structure of Methanobrevibacter oralis macrodomain in complex with ADPr in open conformation
Classification: HYDROLASE
Source organism: Methanobrevibacter oralis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-01-24
Authors: Ariza, A.
PDB entry 8rsk: Crystal structure of Methanobrevibacter oralis macrodomain in complex with Asn-ADPr
Classification: HYDROLASE
Source organism: Methanobrevibacter oralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.359 Å
Deposited: 2024-01-24
Authors: Ariza, A.
PDB entry 8rsl: Crystal structure of Staphylococcus aureus macrodomain
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-01-24
Authors: Ariza, A.
PDB entry 8rsm: Crystal structure of Streptococcus pyogenes macrodomain in complex with ADP-ribose
Classification: HYDROLASE
Source organism: Streptococcus pyogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2024-01-24
Authors: Ariza, A.
PDB entry 8rsn: macrodomain-fused SirTM (Mfs1) from Fusarium oxysporum f. sp. cubense race 1
Classification: HYDROLASE
Source organism: Fusarium oxysporum f. sp. cubense race 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.219 Å
Deposited: 2024-01-24
Authors: Ariza, A.
PDB entry 8rso: Crystal structure of marine actinobacteria clade rhodopsin (MAR) in the ground state
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Actinomarina minuta; marine Actinobacteria clade
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-01-25
Authors: Bukhdruker, S., Kovalev, K., Astashkin, R., Gordeliy, V.
PDB entry 8rsp: Crystal structure of marine actinobacteria clade rhodopsin (MAR) in the P596 state
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Actinomarina minuta; marine Actinobacteria clade
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2024-01-25
Authors: Bukhdruker, S., Kovalev, K., Astashkin, R., Gordeliy, V.
PDB entry 8rsq: Crystal structure of marine actinobacteria clade rhodopsin (MAR) - human GTPase Arf1 (L8K,Q71L) chimera; Ground state
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Actinomarina minuta; Homo sapiens; marine Actinobacteria clade
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-01-25
Authors: Bukhdruker, S., Bratanov, D., Kovalev, K., Astashkin, R., Gordeliy, V.
PDB entry 8rsr: Crystal structure of marine actinobacteria clade rhodopsin (MAR) - human GTPase Arf1 (L8K,Q71L) chimera; N state
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Actinomarina minuta; Homo sapiens; marine Actinobacteria clade
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-01-25
Authors: Bukhdruker, S., Bratanov, D., Kovalev, K., Astashkin, R., Gordeliy, V.
PDB entry 8rss: Crystal structure of marine actinobacteria clade rhodopsin (MAR) in the O* state
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Actinomarina minuta; marine Actinobacteria clade
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2024-01-25
Authors: Bukhdruker, S., Kovalev, K., Astashkin, R., Gordeliy, V.
PDB entry 8rst: Rap from bacteriophage Phi3T in presence of pheromone SRGHTS
Classification: SIGNALING PROTEIN
Source organism: Bacillus phage phi3T; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2024-01-25
Authors: Felipe-Ruiz, A., Zamora-Caballero, S., Marina, A.
PDB entry 8rsu: Rap from bacteriophage Phi3T in presence of pheromone RRGHTA
Classification: SIGNALING PROTEIN
Source organism: Bacillus phage phi3T; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-01-25
Authors: Felipe-Ruiz, A., Zamora-Caballero, S., Marina, A.
PDB entry 8rsv: Rap from bacteriophage Phi3T in presence of pheromone RRGHTAS
Classification: SIGNALING PROTEIN
Source organism: Bacillus phage phi3T; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-01-25
Authors: Felipe-Ruiz, A., Zamora-Caballero, S., Marina, A.
PDB entry 8rsw: Solution NMR structure of Pacsin 2 SH3 domain
Classification: PEPTIDE BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: SOLUTION NMR
Deposited: 2024-01-25
Authors: Tossavainen, H., Permi, P.
PDB entry 8rsx: TRYPTOPHAN SYNTHASE measured via serial crystallography from a silicon HARE-chip
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-01-25
Authors: Sung, S., Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., von Stetten, D., Mehrabi, P., Schulz, E.C., Wilmanns, M.
PDB entry 8rsy: TRYPTOPHAN SYNTHASE measured via serial crystallography from a kapton HARE-chip (50 micron)
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-01-25
Authors: Sung, S., Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., von Stetten, D., Mehrabi, P., Wilmanns, M., Schulz, E.C.
PDB entry 8rsz: TRYPTOPHAN SYNTHASE measured via serial crystallography from a kapton HARE-chip (125 micron)
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-01-25
Authors: Sung, S., Bosman, R., Prester, A., von Soosten, L., Dibenedetto, S., Bartels, K., von Stetten, D., Mehrabi, P., Schulz, E.C., Wilmanns, M.
PDB entry 8rt0: BTV-15 VP5 pH 6.0
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-01-25
Authors: Stuart, D.I., Sutton, G.C.
PDB entry 8rt1: BTV15 VP5 at pH 9.0
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus 15
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-01-25
Authors: Sutton, G.C., Stuart, D.I.
PDB entry 8rt4: O-layer structure (TrwH/VirB7, TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2024-01-25
Authors: Mace, K., Waksman, G.
PDB entry 8rt5: I-layer structure (TrwF/VirB9CTD, TrwE/VirB10CTD) of the outer membrane core complex from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2024-01-25
Authors: Mace, K., Waksman, G.
PDB entry 8rt6: Conformation-A of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-01-25
Authors: Mace, K., Waksman, G.
PDB entry 8rt7: Conformation-B of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-01-25
Authors: Mace, K., Waksman, G.
PDB entry 8rt8: Conformation-C of the full-length outer membrane core complex (TrwH/VirB7, TrwF/VirB9, TrwE/VirB10CTD) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-01-25
Authors: Mace, K., Waksman, G.
PDB entry 8rt9: Stalk complex full-length structure (TrwJ/VirB5-TrwI/VirB6) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-01-25
Authors: Mace, K., Waksman, G.
PDB entry 8rta: Arches-protomer complex full-length structure (TrwJ/VirB8) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.22 Å
Deposited: 2024-01-25
Authors: Mace, K., Waksman, G.
PDB entry 8rtb: Extended inner membrane complex (IMC) protomer structure (TrwM/VirB3-TrwK/VirB4-TrwI/VirB6-TrwG/VirB8-TrwE/VirB10) from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.83 Å
Deposited: 2024-01-25
Authors: Mace, K., Waksman, G.
PDB entry 8rtc: Rap from bacteriophage Phi3T in presence of pheromone RGHTS
Classification: SIGNALING PROTEIN
Source organism: Bacillus phage phi3T; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2024-01-25
Authors: Felipe-Ruiz, A., Zamora-Caballero, S., Marina, A.
PDB entry 8rtd: Stalk-Arches-IMC structure from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.33 Å
Deposited: 2024-01-25
Authors: Mace, K., Waksman, G.
PDB entry 8rte: Rap from bacteriophage Phi105 with peptide ERPVGT
Classification: SIGNALING PROTEIN
Source organism: Bacillus phage phi105; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-01-25
Authors: Felipe-Ruiz, A., Zamora-Caballero, S., Marina, A.
PDB entry 8rtf: Crystal structure of Trypanosoma congolense pyruvate kinase in complex with a single-domain antibody (TcoPYK-sdAb42)
Classification: TRANSFERASE
Source organism: Trypanosoma congolense; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-01-26
Authors: Sterckx, Y.G.-J.
PDB entry 8rtg: Nitratidesulfovibrio vulgaris [FeFe]-hydrogenase [FeFe]-hydrogenase in apo form
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.461 Å
Deposited: 2024-01-26
Authors: Bikbaev, K., Span, I.
PDB entry 8rth: Trypanosoma brucei 3-methylcrotonyl-CoA carboxylase
Classification: TRANSFERASE
Source organism: Trypanosoma brucei
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2024-01-26
Authors: Ruiz, F.M., Plaza-Pegueroles, A., Fernandez-Tornero, C.
PDB entry 8rti: Nitratidesulfovibrio vulgaris [FeFe] hydrogenase in the apo form derivatized with krypton
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.502 Å
Deposited: 2024-01-26
Authors: Bikbaev, K., Carpentier, P., Harand, T., Scheuenstuhl, L., Span, I.
PDB entry 8rtj: X-ray structure of lysozyme obtained upon reaction with [VIVO(8-HQ)2] in ethylene glycol
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2024-01-26
Authors: Paolillo, M., Ferraro, G., Merlino, A.
PDB entry 8rtk: X-ray structure of lysozyme obtained upon reaction with [VIVO(8-HQ)2] in sodium formate
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2024-01-26
Authors: Paolillo, M., Ferraro, G., Merlino, A.
PDB entry 8rtl: Af Aio C65F-C80G
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-01-26
Authors: Engrola, F., Romao, M.J., Correia, M., Santos-Silva, T.
PDB entry 8rtm: Af Aio C65F-C80G bound to Sb oxyanion
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2024-01-26
Authors: Engrola, F., Romao, M.J., Correia, M., Santos-Silva, T.
PDB entry 8rtn: Human thrombin in complex with a trivalent inhibitor
Classification: BLOOD CLOTTING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2024-01-26
Authors: Ripoll-Rozada, J., Maxwell, J., Payne, R.J., Pereira, P.J.B.
PDB entry 8rto: Bilirubin oxidase from Myrothecium verrucaria in complex with ATP
Classification: OXIDOREDUCTASE
Source organism: Albifimbria verrucaria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-01-27
Authors: Svecova, L., Koval, T., Kolenko, P., Ostergaard, L.H., Dohnalek, J.
PDB entry 8rtp: Bilirubin oxidase from Myrothecium verrucaria in complex with NAD+
Classification: OXIDOREDUCTASE
Source organism: Albifimbria verrucaria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-01-27
Authors: Svecova, L., Koval, T., Kolenko, P., Ostergaard, L.H., Dohnalek, J.
PDB entry 8rtq: Bilirubin oxidase from Myrothecium verrucaria with G395T mutation
Classification: OXIDOREDUCTASE
Source organism: Albifimbria verrucaria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-01-27
Authors: Svecova, L., Koval, T., Kolenko, P., Ostergaard, L.H., Dohnalek, J.
PDB entry 8rtr: Bilirubin oxidase from Myrothecium verrucaria with R356S mutation
Classification: OXIDOREDUCTASE
Source organism: Albifimbria verrucaria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-01-27
Authors: Svecova, L., Koval, T., Kolenko, P., Ostergaard, L.H., Dohnalek, J.
PDB entry 8rts: Structure of a homomeric human LRRC8C Volume-Regulated Anion Channel
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2024-01-29
Authors: Rutz, S., Quinodoz, M., Peter, V., Garavelli, L., Innes, M., Kellenberger, S., Barone, A., Campos-Xavier, B., Unger, S., Rivolta, C., Dutzler, R., Superti-Furga, A.
PDB entry 8rtt: Structure of the formin Cdc12 bound to the barbed end of phalloidin-stabilized F-actin.
Classification: STRUCTURAL PROTEIN
Source organism: Amanita phalloides; Homo sapiens; Schizosaccharomyces pombe
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2024-01-29
Authors: Oosterheert, W., Boiero Sanders, M., Funk, J., Prumbaum, D., Raunser, S., Bieling, P.
PDB entry 8rtv: Crystal structure of CYP154E1 from Thermobifida fusca YX in complex with 4-Phenylimidazole
Classification: OXIDOREDUCTASE
Source organism: Thermobifida fusca YX
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2024-01-29
Authors: Bikbaev, K., Hoelzel, S., Urlacher, V., Span, I.
PDB entry 8rtw: Crystal Structure of the Anti-testosterone Fab in Complex with Testosterone
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-01-29
Authors: Eronen, V., Parkkinen, T., Hakulinen, N., Rouvinen, J.
PDB entry 8rtx: Crystal Structure of an Anti-idiotype Fab Fragment
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-01-29
Authors: Eronen, V., Parkkinen, T., Hakulinen, N., Rouvinen, J.
PDB entry 8rty: Structure of the F-actin barbed end bound by Cdc12 and profilin (ring complex) at a resolution of 6.3 Angstrom
Classification: STRUCTURAL PROTEIN
Source organism: Amanita phalloides; Homo sapiens; Schizosaccharomyces pombe
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.25 Å
Deposited: 2024-01-29
Authors: Oosterheert, W., Boiero Sanders, M., Funk, J., Prumbaum, D., Raunser, S., Bieling, P.
PDB entry 8rtz: The structure of E. coli penicillin binding protein 3 (PBP3) in complex with a bicyclic peptide inhibitor
Classification: HYDROLASE
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2024-01-29
Authors: Newman, H., Rowland, C.E., Dods, R., Lewis, N., Stanway, S.J., Bellini, D., Beswick, P.
PDB entry 8ru0: Structure of the undecorated barbed end of F-actin.
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2024-01-29
Authors: Oosterheert, W., Boiero Sanders, M., Funk, J., Prumbaum, D., Raunser, S., Bieling, P.
PDB entry 8ru1: Chromatin remodeling regulator CECR2 with in crystallo disulfide bond
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-01-29
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F., Structural Genomics Consortium (SGC)
PDB entry 8ru2: Structure of the F-actin barbed end bound by formin mDia1
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-01-29
Authors: Oosterheert, W., Boiero Sanders, M., Funk, J., Prumbaum, D., Raunser, S., Bieling, P.
PDB entry 8ru3: Crystal structure of beta-catenin in complex with alpha-helical peptide inhibitor
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2024-01-30
Authors: Yeste Vazquez, A., Klintrot, C.I.R., Grossmann, T.N., Hennig, S.
PDB entry 8ru4: Crystal structure of Human Catenin Beta-1 in complex with stitched peptide inhibitor
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2024-01-30
Authors: Yeste Vazquez, A., Klintrot, C.I.R., Grossmann, T.N., Hennig, S.
PDB entry 8ru5: ATPase family AAA domain containing 2 with crystallization epitope mutations V1022R:Q1027E
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2024-01-30
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F., Structural Genomics Consortium (SGC)
PDB entry 8ru6: Nitratidesulfovibrio vulgaris [FeFe]-hydrogenase [FeFe]-hydrogenase variant with both subunits linked by a 4 amino acid linker peptide derived from CpI of Clostridium pasteurianum
Classification: OXIDOREDUCTASE
Source organism: Clostridium pasteurianum; Nitratidesulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2024-01-30
Authors: Bikbaev, K., Jaenecke, J., Winkler, M., Span, I.
PDB entry 8ru8: A crystal form of a human CDK2-CDK7 chimera
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2024-01-30
Authors: Mukherjee, M., Cleasby, A.
PDB entry 8ru9: High pH (8.0) nitrite-bound MSOX movie series dataset 1 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [0.69 MGy]
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2024-01-30
Authors: Rose, S.L., Ferroni, F.M., Horrell, S., Brondino, C.D., Eady, R.R., Jaho, S., Hough, M.A., Owen, A.L., Antonyuk, S.V., Hasnain, S.S.
PDB entry 8rua: Crystal structure of Rhizobium etli L-asparaginase ReAV C135A mutant
Classification: HYDROLASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2024-01-30
Authors: Pokrywka, K., Grzechowiak, M., Sliwiak, J., Worsztynowicz, P., Loch, J.I., Ruszkowski, M., Gilski, M., Jaskolski, M.
PDB entry 8ruc: ACTIVATED SPINACH RUBISCO COMPLEXED WITH 2-CARBOXYARABINITOL BISPHOSPHATE
Classification: LYASE (CARBON-CARBON)
Source organism: Spinacia oleracea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 1996-02-22
Authors: Andersson, I., Knight, S., Branden, C.-I.
PDB entry 8rud: Crystal structure of Rhizobium etli L-asparaginase ReAV K138A mutant
Classification: HYDROLASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-01-30
Authors: Pokrywka, K., Grzechowiak, M., Sliwiak, J., Worsztynowicz, P., Loch, J.I., Ruszkowski, M., Gilski, M., Jaskolski, M.
PDB entry 8rue: Crystal structure of Rhizobium etli L-asparaginase ReAV H139A mutant
Classification: HYDROLASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-01-30
Authors: Pokrywka, K., Grzechowiak, M., Sliwiak, J., Worsztynowicz, P., Loch, J.I., Ruszkowski, M., Gilski, M., Jaskolski, M.
PDB entry 8ruf: Crystal structure of Rhizobium etli L-asparaginase ReAV D187A mutant
Classification: HYDROLASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-01-30
Authors: Pokrywka, K., Grzechowiak, M., Sliwiak, J., Worsztynowicz, P., Loch, J.I., Ruszkowski, M., Gilski, M., Jaskolski, M.
PDB entry 8rug: Crystal structure of Rhizobium etli L-asparaginase ReAV C189A mutant
Classification: HYDROLASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-30
Authors: Pokrywka, K., Grzechowiak, M., Sliwiak, J., Worsztynowicz, P., Loch, J.I., Ruszkowski, M., Gilski, M., Jaskolski, M.
PDB entry 8ruh: Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.55 Å
Deposited: 2024-01-30
Authors: Silvestri, I., Marcia, M.
PDB entry 8rui: Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 1h soaking
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2024-01-30
Authors: Silvestri, I., Marcia, M.
PDB entry 8ruj: Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and ARN25850 after 1h soaking
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2024-01-30
Authors: Silvestri, I., Marcia, M.
PDB entry 8ruk: Structure of Oceanobacillus iheyensis group II intron in the presence of Na+, Mg2+, and ARN25850
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.81 Å
Deposited: 2024-01-31
Authors: Silvestri, I., Marcia, M.
PDB entry 8rul: Structure of Oceanobacillus iheyensis group II intron in the presence of Li+ and Mg2+
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.62 Å
Deposited: 2024-01-31
Authors: Silvestri, I., Marcia, M.
PDB entry 8rum: Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and intronistat B
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.62 Å
Deposited: 2024-01-31
Authors: Silvestri, I., Marcia, M.
PDB entry 8run: Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and ARN25850
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.73 Å
Deposited: 2024-01-31
Authors: Silvestri, I., Marcia, M.
PDB entry 8ruo: D44E mutant crystal structure of LpMIP
Classification: STRUCTURAL PROTEIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-01-31
Authors: Wiedemann, C., Whittaker, J.J., Guskov, A., Hellmich, U.A.
PDB entry 8rup: Chromosome Passenger Complex (CPC) localization module in complex with H3.T3p-nucleosome
Classification: CELL CYCLE
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2024-01-31
Authors: Ruza, R.R., Barr, F.A.
PDB entry 8ruq: Borealin N-terminus in complex with H3.T3p-nucleosome
Classification: CELL CYCLE
Source organism: Homo sapiens; unidentified; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2024-01-31
Authors: Ruza, R.R., Barr, F.A.
PDB entry 8rur: High pH (8.0) nitrite-bound MSOX movie series dataset 2 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [1.38 MGy]
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2024-01-31
Authors: Rose, S.L., Ferroni, F.M., Horrell, S., Brondino, C.D., Eady, R.R., Jaho, S., Hough, M.A., Owen, A.L., Antonyuk, S.V., Hasnain, S.S.
PDB entry 8rus: Hen egg-white lysozyme (HEWL) structure from EuXFEL FXE, multi-hit Droplet-on-Demand (DoD) injection, 9.3 keV photon energy, space group P432121
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2024-01-31
Authors: Perrett, S., van Thor, J.J.
PDB entry 8rut: HIF prolyl-hydroxylase-2 (PHD2) T387V variant bound to Fe(III), 2-oxoglutarate (2OG) and Hypoxia-inducible Factor-2alpha (HIF-2alpha)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2024-01-31
Authors: Fiorini, G., Schofield, C.J.
PDB entry 8ruu: Fabs derived from bimekizumab in complex with IL-17F
Classification: IMMUNOSUPPRESSANT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2024-01-31
Authors: Adams, R., Lawson, A.D.G.
PDB entry 8ruv: HIF prolyl hydroxylase 2 (PHD2) T387I variant bound to Fe(III), 2-oxoglutarate (2OG) and Hypoxia-inducible Factor 2alpha (HIF2alpha)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-01-31
Authors: Fiorini, G., Schofield, C.J., Arif, F., Kibria, M.M.
PDB entry 8ruw: Crystal structure of Archaeoglobus fulgidus (S)-3-O-geranylgeranylglyceryl phosphate synthase
Classification: TRANSFERASE
Source organism: Archaeoglobus fulgidus DSM 4304
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-01-31
Authors: Eilert, L., Blankenfeldt, W.
PDB entry 8ruy: Structure of IFTA and IFTB in Retrograde Intraflagellar transport trains
Classification: PROTEIN TRANSPORT
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 15.4 Å
Deposited: 2024-01-31
Authors: Lacey, S., Pigino, G.
PDB entry 8ruz: Anaerobic HIF prolyl-hydroxylase-2 (PHD2) T387S variant bound to acetate (ACT) and Hypoxia-inducible Factor-2alpha (HIF-2alpha)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2024-01-31
Authors: Fiorini, G., Schofield, C.J.
PDB entry 8rv0: Crystal structure of octaheme nitrite reductase from Trichlorobacter ammonificans in complex with nitrite
Classification: OXIDOREDUCTASE
Source organism: Trichlorobacter ammonificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-01-31
Authors: Polyakov, K.M., Safonova, T.N., Osipov, E., Popov, A.N., Tikhonova, T.V., Popov, V.O.
PDB entry 8rv1: HIF prolyl hydroxylase 2 (PHD2) T387S variant bound to acetate (ACT) and hydroxylated Hypoxia-inducible Factor 2alpha (HIF2alpha)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2024-01-31
Authors: Fiorini, G., Schofield, C.J.
PDB entry 8rv2: Structure of the formin INF2 bound to the barbed end of F-actin.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2024-01-31
Authors: Oosterheert, W., Boiero Sanders, M., Funk, J., Prumbaum, D., Raunser, S., Bieling, P.
PDB entry 8rv3: Structure of the domain IV of the replication factor RctB from Vibrio cholerae
Classification: REPLICATION
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-01-31
Authors: Garcia-Pino, A., Talavera Perez, A.
PDB entry 8rv4: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-01-31
Authors: Kalnins, G.
PDB entry 8rv5: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-01-31
Authors: Kalnins, G.
PDB entry 8rv6: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-01-31
Authors: Kalnins, G.
PDB entry 8rv7: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 4
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-01-31
Authors: Kalnins, G.
PDB entry 8rv8: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 5
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-31
Authors: Kalnins, G.
PDB entry 8rv9: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 6
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-01-31
Authors: Kalnins, G.
PDB entry 8rva: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 7
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-01-31
Authors: Kalnins, G.
PDB entry 8rvb: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 8
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-01-31
Authors: Kalnins, G.
PDB entry 8rvc: Crystal structure of alpha keto acid C-methyl-transferases MrsA bound to ketoarginine
Classification: TRANSFERASE
Source organism: Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.969 Å
Deposited: 2024-02-01
Authors: Gerhardt, S., Kemper, F., Andexer, J.N.
PDB entry 8rvd: Unbound murine diabetogenic 4.1 TCR
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-02-01
Authors: Lopez-Sagaseta, J., Erausquin, E.
PDB entry 8rve: Vimentin intermediate filament
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.2 Å
Deposited: 2024-02-01
Authors: Eibauer, M., Medalia, O.
PDB entry 8rvf: CRYSTAL STRUCTURE OF HUMAN MONOGLYCERIDE LIPASE IN COMPLEX WITH COMPOUND 5
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2024-02-01
Authors: Leibrock, L., Hentsch, A., Nazare, M., Grether, U., Kuhn, B., Blaising, J., Benz, J.
PDB entry 8rvg: Structure of the binding domain of BoNT/A mutant Y1117V in complex with the GD1a ganglioside receptor
Classification: TOXIN
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-02-01
Authors: Masuyer, G., Stenmark, P.
PDB entry 8rvh: Structure of the binding domain of BoNT/A mutant Y1117V/H1253K in complex with the GD1a ganglioside receptor
Classification: TOXIN
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-02-01
Authors: Masuyer, G., Stenmark, P.
PDB entry 8rvi: Structure of the binding domain of BoNT/A mutant H1253K in complex with the GM1a ganglioside receptor
Classification: TOXIN
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-02-01
Authors: Masuyer, G., Stenmark, P.
PDB entry 8rvj: Engineered Encapsulin P3P4
Classification: VIRUS LIKE PARTICLE
Source organism: Bacillus thermotolerans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-01
Authors: Satler, T., Jerala, R.
PDB entry 8rvk: Maltodextrin phosphorylase (MalP) in complex with a alpha-1,2-cyclophellitol analogue
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2024-02-01
Authors: Bennett, M., Ofman, T.P., Overkleeft, H.S., Davies, G.J.
PDB entry 8rvl: Proteasomal late precursor complex from pre1-1
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.14 Å
Deposited: 2024-02-01
Authors: Mark, E., Ramos, P.C., Kayser, F., Hoeckendorff, J., Dohmen, R.J., Wendler, P.
PDB entry 8rvm: Crystal structure of octaheme nitrite reductase from Trichlorobacter ammonificans in space group P63
Classification: OXIDOREDUCTASE
Source organism: Trichlorobacter ammonificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-02-01
Authors: Polyakov, K.M., Safoonova, T.N., Osipov, E., Popov, A.N., Tikhonova, T.V., Popov, V.O.
PDB entry 8rvn: Nipah virus (NiV) fusion protein in complex with neutralizing Fab92
Classification: VIRAL PROTEIN
Source organism: Henipavirus nipahense; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-02-01
Authors: Avanzato, V.A., Stass, R., Duyvesteyn, H.M.E., Bowden, T.A.
PDB entry 8rvo: Proteasomal late precursor complex from pre1-1, state 1
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2024-02-01
Authors: Mark, E., Ramos, P.C., Kayser, F., Hoeckendorff, J., Dohmen, R.J., Wendler, P.
PDB entry 8rvp: Proteasomal late precursor complex from pre1-1, state 2
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.28 Å
Deposited: 2024-02-01
Authors: Mark, E., Ramos, P.C., Kayser, F., Hoeckendorff, J., Dohmen, R.J., Wendler, P.
PDB entry 8rvq: 20S proteasome from pre1-1
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.02 Å
Deposited: 2024-02-01
Authors: Mark, E., Ramos, P.C., Kayser, F., Hoeckendorff, J., Dohmen, R.J., Wendler, P.
PDB entry 8rvr: Crystal structure of Trypanosoma congolense pyruvate kinase in complex with a single-domain antibody (TcoPYK-sdAb42) in the presence of sulfate
Classification: TRANSFERASE
Source organism: Trypanosoma congolense; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2024-02-02
Authors: Sterckx, Y.G.-J.
PDB entry 8rvs: Crystal structure of alpha keto acid C-methyl-transferases MrsA bound to SAM
Classification: TRANSFERASE
Source organism: Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.632 Å
Deposited: 2024-02-02
Authors: Gerhardt, S., Andexer, J.N.
PDB entry 8rvt: Structure of full-length human insulin fibrils
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: SOLID-STATE NMR
Deposited: 2024-02-02
Authors: Bardiaux, B., Suladze, S., Reif, B.
PDB entry 8rvu: CryoEM structure of the Elp-Hdr complex of Methanothermobacter marburgensis state 2 (composite structure)
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2024-02-02
Authors: San Segundo-Acosta, P., Murphy, B.J.
PDB entry 8rvv: CryoEM structure of the Elp-Hdr complex of Methanothermobacter marburgensis state 2, dimer (composite structure)
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-02-15
Authors: San Segundo-Acosta, P., Murphy, B.J.
PDB entry 8rvw: Dark structure of the human adenosine A2A receptor bound to synthetic photoswitch ""StilSwitch3"" determined by serial synchrotron crystallography
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-02-02
Authors: Glover, H., Bertrand, Q.
PDB entry 8rvx: Cph1 phytochrome PAS-GAF-PHY Y176H mutant
Classification: FLUORESCENT PROTEIN
Source organism: Synechocystis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.696 Å
Deposited: 2024-02-02
Authors: Nagano, S., Hughes, J.
PDB entry 8rvy: CryoEM structure of the Elp-Hdr complex of Methanothermobacter marburgensis state 1 (composite structure)
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.36 Å
Deposited: 2024-02-02
Authors: San Segundo-Acosta, P., Murphy, B.J.
PDB entry 8rw0: Crystal structure of the adenosine A2A receptor in complex with Istradefylline
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-02-02
Authors: Glover, H.
PDB entry 8rw1: Structure of a yeast 48S-AUC preinitiation complex in closed conformation
Classification: RIBOSOME
Source organism: Kluyveromyces lactis NRRL Y-1140; Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-02-02
Authors: Villamayor-Belinchon, L., Sharma, P., Llacer, J.L., Hussain, T.
PDB entry 8rw2: Structure of a chair-type antiparallel quadruplex-duplex hybrid at pH 6
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-02-02
Authors: Vianney, Y.M., Weisz, K.
PDB entry 8rw3: Crystal Structure of Agd31B, alpha-transglucosylase, complexed with a non-covalent 1,2- Cyclophellitol aziridine
Classification: STRUCTURAL PROTEIN
Source organism: Cellvibrio japonicus Ueda107
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-02-02
Authors: Moran, E., Davies, G., Ofamn, T., Heming, J., Nin-Hill, A., Kullmer, F., Steneker, R., Klein, A., Bennett, M., Ruijgrok, G., Kok, K., Aerts, J., Van der Marel, G., Rovira, C., Artola, M., Codee, J., Overkleeft, H.
PDB entry 8rw4: Crystal structure of the adenosine A2A receptor in complex with the synthetic photoswitch 'AzoSwitch2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-02-02
Authors: Glover, H.