LiteFold/PDB huggingface dataset:
PDB entry 8axa: Cryo-EM structure of shCas12k-sgRNA-dsDNA ternary complex (type V-K CRISPR-associated transposon)
Classification: DNA BINDING PROTEIN
Source organism: Scytonema hofmannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2022-08-31
Authors: Tenjo-Castano, F., Sofos, N., Stella, S., Fuglsang, A., Pape, T., Mesa, P., Stutzke, L.S., Temperini, P., Montoya, G.
PDB entry 8axb: Cryo-EM structure of Cas12k-sgRNA binary complex (type V-K CRISPR-associated transposon)
Classification: DNA BINDING PROTEIN
Source organism: Scytonema hofmannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2022-08-31
Authors: Tenjo-Castano, F., Sofos, N., Stella, S., Molina, R., Pape, T., Lopez-Mendez, B., Stutzke, L.S., Temperini, P., Montoya, G.
PDB entry 8axc: Crystal structure of mouse Ces2c
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2022-08-31
Authors: Eisner, H., Riegler-Berket, L., Rodriguez Gamez, C., Sagmeister, T., Chalhoub, G., Darnhofer, B., Panikkaveetil Jawaharlal, J., Birner-Gruenberger, R., Pavkov-Keller, T., Haemmerle, G., Schoiswohl, G., Oberer, M.
PDB entry 8axd: Human serotonin 5-HT3A receptor (apo, resting conformation)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2022-08-31
Authors: Lopez-Sanchez, U., Nury, H.
PDB entry 8axe: Small molecule stabilizer for ERalpha and 14-3-3 (1074210)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-08-31
Authors: Konstantinidou, M., Visser, E.J., Vandenboorn, E.M.F., Sheng, C., Jaishankar, P., Overmans, M.J.A.M., Dutta, S., Neitz, J., Renslo, A., Ottmann, C., Brunsveld, L., Arkin, M.
PDB entry 8axf: Crystal structure of FMV N bound to 42-mer ssRNA
Classification: VIRAL PROTEIN
Source organism: Emaravirus fici; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2022-08-31
Authors: Izhaki-Tavor, L., Yechezkel, I., Dessau, M.
PDB entry 8axg: Crystal structure of Fusobacterium nucleatum fusolisin protease
Classification: HYDROLASE
Source organism: Fusobacterium nucleatum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2022-08-31
Authors: Isupov, M.N., Wiener, R., Rouvinski, A., Fahoum, J., Kumar, M., Read, R.J.
PDB entry 8axh: Crystal structure of a MUC1-like glycopeptide containing the unnatural L-4-hydroxynorvaline in complex with scFv-SM3
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-08-31
Authors: Bermejo, I., Corzana, F., Hurtado-Guerrero, R.
PDB entry 8axi: Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Classification: HYDROLASE
Source organism: Akkermansia muciniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-08-31
Authors: Sakanaka, H., Nielsen, T.S., Pichler, M.J., Nordberg Karlsson, E., Abou Hachem, M., Morth, J.P.
PDB entry 8axj: Crystal structure of the N-terminal domain of Trypanosoma brucei CFAP410
Classification: STRUCTURAL PROTEIN
Source organism: Trypanosoma brucei brucei TREU927
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2022-08-31
Authors: Dong, G., Stadler, A.
PDB entry 8axk: Type 3 secretion system export apparatus core, inner rod and needle of Shigella flexneri
Classification: PROTEIN TRANSPORT
Source organism: Shigella flexneri
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.05 Å
Deposited: 2022-08-31
Authors: Lunelli, M.
PDB entry 8axl: Outer membrane secretin pore of the type 3 secretion system of Shigella flexneri
Classification: PROTEIN TRANSPORT
Source organism: Shigella flexneri
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2022-08-31
Authors: Lunelli, M.
PDB entry 8axn: Inner membrane ring and secretin N0 N1 domains of the type 3 secretion system of Shigella flexneri
Classification: PROTEIN TRANSPORT
Source organism: Shigella flexneri
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2022-08-31
Authors: Lunelli, M.
PDB entry 8axo: Crystal structure of the C-terminal domain of Trypanosoma brucei CFAP410
Classification: STRUCTURAL PROTEIN
Source organism: Trypanosoma brucei brucei TREU927
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2022-08-31
Authors: Dong, G., Stadler, A.
PDB entry 8axp: Neisseria gonorrhoeae peptidyl-tRNA hydrolase complexed with an XChem hit.
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-08-31
Authors: Roe, S.M., Fearon, D.
PDB entry 8axr: Crystal structure of the C-terminal domain of human CFAP410
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-08-31
Authors: Dong, G., Stadler, A.
PDB entry 8axs: Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Classification: HYDROLASE
Source organism: Akkermansia muciniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-08-31
Authors: Sakanaka, H., Nielsen, T.S., Pichler, M.J., Nordberg Karlsson, E., Abou Hachem, M., Morth, J.P.
PDB entry 8axt: Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Classification: HYDROLASE
Source organism: Akkermansia muciniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2022-08-31
Authors: Sakanaka, H., Nielsen, T.S., Pichler, M.J., Nordberg Karlsson, E., Abou Hachem, M., Morth, J.P.
PDB entry 8axu: Small molecule stabilizer for ERalpha and 14-3-3 (1075297)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-01
Authors: Konstantinidou, M., Visser, E.J., Vandenboorn, E.M.F., Sheng, C., Jaishankar, P., Overmans, M.J.A.M., Dutta, S., Neitz, J., Renslo, A., Ottmann, C., Brunsveld, L., Arkin, M.
PDB entry 8axv: Structure of an open form of CHIKV nsP1 capping pores
Classification: VIRAL PROTEIN
Source organism: Chikungunya virus strain S27-African prototype
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-09-01
Authors: Reguera, J., Jones, R., Hons, M.
PDB entry 8axw: The structure of mouse AsterC (GramD1c) with Ezetimibe
Classification: LIPID TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-01
Authors: Fairall, L., Xiao, X., Burger, L., Tontonoz, P., Schwabe, J.W.R.
PDB entry 8axx: Expanded Coxsackievirus A9 after treatment with endosomal ionic buffer
Classification: VIRUS
Source organism: Human coxsackievirus A9 (strain Griggs)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-09-01
Authors: Domanska, A., Plavec, Z., Ruokolainen, V., Loflund, B., Marjomaki, V.S., Butcher, S.J.
PDB entry 8axy: Staphylococcus aureus endonuclease IV orthorhombic crystal form
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2022-09-01
Authors: Rouvinski, A., Kirillov, S., Saper, M.A., Wiener, R., Isupov, M.N.
PDB entry 8axz: Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with S-adenosylmethionine, adenosin and diphosphono-aminophosphonic acid.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.154 Å
Deposited: 2022-09-01
Authors: Nawrotek, A., Vuillard, L., Miallau, L.
PDB entry 8ay0: Crystal Structure of the peptide binding protein DppE from Bacillus subtilis in complex with murein tripeptide
Classification: TRANSPORT PROTEIN
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2022-09-01
Authors: Hughes, A.M., Dodson, E.J., Wilkinson, A.J.
PDB entry 8ay1: Crystal structure of the C. elegans POFUT2 (CePoFUT2) triple mutant (R298K-R299K-A418C) in complex with the Rattus norvegicus TSR4 single mutant (E10C) from F-spondin
Classification: TRANSFERASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2022-09-01
Authors: Hurtado-Guerrero, R., Merino, P.
PDB entry 8ay2: Crystal structure of the C-terminal part of rat Sec8
Classification: EXOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-09-01
Authors: Dong, G., Lesigang, J.
PDB entry 8ay3: X-RAY CRYSTAL STRUCTURE OF THE CsPYL1-iSB9-HAB1 TERNARY COMPLEX
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Citrus sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-09-01
Authors: Infantes, L., Albert, A.
PDB entry 8ay4: Human rhinovirus 2 virion in situ
Classification: VIRUS
Source organism: rhinovirus A2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2022-09-01
Authors: Ishemgulova, A., Mukhamedova, L., Trebichalska, Z., Payne, P., Smerdova, L., Moravcova, J., Hrebik, D., Buchta, D., Skubnik, K., Fuzik, T., Novacek, J., Plevka, P.
PDB entry 8ay5: Human rhinovirus 2 empty particle in situ
Classification: VIRUS
Source organism: rhinovirus A2
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2022-09-01
Authors: Ishemgulova, A., Mukhamedova, L., Trebichalska, Z., Payne, P., Smerdova, L., Moravcova, J., Hrebik, D., Buchta, D., Skubnik, K., Fuzik, T., Novacek, J., Plevka, P.
PDB entry 8ay6: X-RAY CRYSTAL STRUCTURE OF THE CsPYL1(V112L, T135L,F137I, T153I, V168A)-SB-HAB1 TERNARY COMPLEX
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Citrus sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2022-09-02
Authors: Infantes, L., Albert, A.
PDB entry 8ay7: X-RAY CRYSTAL STRUCTURE OF THE CsPYL1(V112L, T135L,F137I, T153I, V168A)-iSB7-HAB1 TERNARY COMPLEX
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Citrus sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.131 Å
Deposited: 2022-09-02
Authors: Infantes, L., Albert, A.
PDB entry 8ay8: X-RAY CRYSTAL STRUCTURE OF THE CsPYL1(V112L, T135L,F137I, T153I, V168A)-iSB9-HAB1 TERNARY COMPLEX
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Citrus sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-09-02
Authors: Infantes, L., Albert, A.
PDB entry 8ay9: X-RAY CRYSTAL STRUCTURE OF THE CsPYL1(V112L, T135L,F137I, T153I, V168A)-ABA-HAB1 TERNARY COMPLEX
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Citrus sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.281 Å
Deposited: 2022-09-02
Authors: Infantes, L., Albert, A.
PDB entry 8aya: X-RAY CRYSTAL STRUCTURE OF THE CsPYL1-A10-HAB1 TERNARY COMPLEX
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Citrus sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.742 Å
Deposited: 2022-09-02
Authors: Infantes, L., Albert, A.
PDB entry 8ayb: anammox-specific FabZ from Scalindua brodae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Candidatus Scalindua brodae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-09-02
Authors: Dietl, A., Barends, T.R.M.
PDB entry 8ayc: Scalindua brodae amxFabZ, I69G mutant
Classification: LIPID BINDING PROTEIN
Source organism: Candidatus Scalindua brodae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-09-02
Authors: Dietl, A., Barends, T.
PDB entry 8ayd: Anammox-specific FabZ from the annamox bacterium Kuenenia stuttgartiensis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Candidatus Kuenenia stuttgartiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-09-02
Authors: Dietl, A., Barends, T.
PDB entry 8aye: E. coli 70S ribosome bound to thermorubin and fMet-tRNA
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.96 Å
Deposited: 2022-09-02
Authors: Sanyal, S., Parajuli, N.P., Emmerich, A.G.
PDB entry 8ayf: Crystal structure of human Sphingosine-1-phosphate lyase 1
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2022-09-02
Authors: Giardina, G., Catalano, F., Pampalone, G., Cellini, B.
PDB entry 8ayg: Crystal structure of an intramolecular i-motif at the insulin-linked polymorphic region (ILPR)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-09-02
Authors: Parkinson, G.N., Alexandrou, E., Waller, Z.A.E., El-Omari, K.
PDB entry 8ayh: Structure of Complement C5 in Complex with small molecule inhibitor and CVF
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Naja kaouthia
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2022-09-02
Authors: Srinivas, H.
PDB entry 8ayi: Scalindua brodae amxFabZ H48N mutant
Classification: LIPID BINDING PROTEIN
Source organism: Candidatus Scalindua brodae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-09-02
Authors: Dietl, A., Barends, T.
PDB entry 8ayj: Crystal structure of D-amino acid aminotransferase from Aminobacterium colombiens complexed with 3-aminooxypropionic acid
Classification: TRANSFERASE
Source organism: Aminobacterium colombiense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-09-02
Authors: Matyuta, I.O., Boyko, K.M., Nikolaeva, A.Y., Shilova, S.A., Rakitina, T.V., Popov, V.O., Bezsudnova, E.Y.
PDB entry 8ayk: Crystal structure of D-amino acid aminotrensferase from Aminobacterium colombiense complexed with D-glutamate
Classification: TRANSFERASE
Source organism: Aminobacterium colombiense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-09-02
Authors: Matyuta, I.O., Boyko, K.M., Nikolaeva, A.Y., Shilova, S.A., Rakitina, T.V., Minyaev, M.E., Popov, V.O., Bezsudnova, E.Y.
PDB entry 8ayl: Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-61432059
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-09-02
Authors: Zhang, D., Lape, R., Shaikh, S., Kohegyi, B., Watson, J.F., Cais, O., Nakagawa, T., Greger, I.
PDB entry 8aym: Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-55511118
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-09-02
Authors: Zhang, D., Lape, R., Shaikh, S., Kohegyi, B., Watson, J.F., Cais, O., Nakagawa, T., Greger, I.H.
PDB entry 8ayn: Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand LY3130481
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-09-02
Authors: Zhang, D., Lape, R., Shaikh, S., Kohegyi, B., Watson, J.F., Cais, O., Nakagawa, T., Greger, I.H.
PDB entry 8ayo: Open state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand JNJ-61432059
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-09-02
Authors: Zhang, D., Lape, R., Shaikh, S., Kohegyi, B., Watson, J.F., Cais, O., Nakagawa, T., Greger, I.H.
PDB entry 8ayp: NaK C-DI mutant with Rb+ and Ba2+
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-09-02
Authors: Minniberger, S., Plested, A.J.R.
PDB entry 8ayq: NaK C-DI mutant with Rb+ and Ca2+
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-09-02
Authors: Minniberger, S., Plested, A.J.R.
PDB entry 8ayr: Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota
Classification: HYDROLASE
Source organism: Akkermansia muciniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-09-02
Authors: Sakanaka, H., Nielsen, T.S., Pichler, M.J., Nordberg Karlsson, E., Abou Hachem, M., Morth, J.P.
PDB entry 8ays: SARS-CoV-2 non-structural protein-1 (nsp1) in complex with 4-(2-aminothiazol-4-yl)phenol
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2022-09-03
Authors: Ma, S., Damfo, S., Pinotsis, N., Bowler, M.W., Kozielski, F.
PDB entry 8ayt: Crystal structure of SUDV VP40 W95A mutant
Classification: VIRAL PROTEIN
Source organism: Sudan ebolavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-09-03
Authors: Werner, A.-D., Steinchen, W., Werel, L., Kowalski, K., Essen, L.-O., Becker, S.
PDB entry 8ayu: Crystal structure of SUDV VP40 L117A mutant
Classification: VIRAL PROTEIN
Source organism: Sudan ebolavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-09-03
Authors: Werner, A.-D., Steinchen, W., Werel, L., Kowalski, K., Essen, L.-O., Becker, S.
PDB entry 8ayv: Crystal structure of the Malonyl-ACP Decarboxylase MadB from Pseudomonas putida
Classification: TRANSFERASE
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 1.044 Å
Deposited: 2022-09-03
Authors: Zahn, M., Kuatsjah, E., Beckham, G.T., McGeehan, J.E.
PDB entry 8ayx: Poliovirus type 3 (strain Saukett) stabilised virus-like particle (PV3 SC8) in complex with GSH and GPP3
Classification: VIRUS LIKE PARTICLE
Source organism: Human poliovirus 3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-09-04
Authors: Bahar, M.W., Fry, E.E., Stuart, D.I.
PDB entry 8ayy: Poliovirus type 3 (strain Saukett) stabilised virus-like particle (PV3 SC8) in complex with GSH and Pleconaril
Classification: VIRUS LIKE PARTICLE
Source organism: Human poliovirus 3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-09-04
Authors: Bahar, M.W., Fry, E.E., Stuart, D.I.
PDB entry 8ayz: Poliovirus type 2 (strain MEF-1) virus-like particle in complex with capsid binder compound 17
Classification: VIRUS LIKE PARTICLE
Source organism: Human poliovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.88 Å
Deposited: 2022-09-04
Authors: Bahar, M.W., Fry, E.E., Stuart, D.I.
PDB entry 8az0: IAPP S20G growth-phase fibril polymorph 2PF-L
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-09-05
Authors: Wilkinson, M., Xu, Y., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8az1: IAPP S20G growth-phase fibril polymorph 2PF-C
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-09-05
Authors: Wilkinson, M., Xu, Y., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8az2: IAPP S20G growth-phase fibril polymorph 3PF-CU
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-09-05
Authors: Wilkinson, M., Xu, Y., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8az3: IAPP S20G growth-phase fibril polymorph 4PF-CU
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-09-05
Authors: Wilkinson, M., Xu, Y., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8az4: IAPP S20G plateau-phase fibril polymorph 2PF-L
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2022-09-05
Authors: Wilkinson, M., Xu, Y., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8az5: IAPP S20G plateau-phase fibril polymorph 4PF-CU
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-09-05
Authors: Wilkinson, M., Xu, Y., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8az6: IAPP S20G plateau-phase fibril polymorph 4PF-LU
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-09-05
Authors: Wilkinson, M., Xu, Y., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8az7: IAPP S20G plateau-phase fibril polymorph 4PF-LJ
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-09-05
Authors: Wilkinson, M., Xu, Y., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8az8: SARS-CoV-2 non-structural protein-1 (nsp1) in complex with 2-(benzylamino)ethan-1-ol
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2022-09-05
Authors: Ma, S., Damfo, S., Pinotsis, N., Bowler, M.W., Kozielski, F.
PDB entry 8aza: Structure of RIP2K dimer bound to the XIAP BIR2 domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2022-09-05
Authors: Pellegrini, E., Cusack, S.
PDB entry 8azb: Crystal Structure of the peptide binding protein DppE from Bacillus subtilis in the unliganded state
Classification: TRANSPORT PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-09-05
Authors: Hughes, A.M., Dodson, E.J., Wilkinson, A.J.
PDB entry 8azc: Structure of SARS-CoV-2 NSP3 macrodomain in the apo form
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2022-09-05
Authors: Sander, S., Tidow, H., Fliegert, R., Sandmann, M.
PDB entry 8azd: Structure of SARS-CoV-2 NSP3 macrodomain in complex with ADPR
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-09-05
Authors: Sander, S., Tidow, H., Fliegert, R., Sandmann, M.
PDB entry 8aze: Small molecule stabilizer for ERalpha and 14-3-3 (1075306)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-06
Authors: Konstantinidou, M., Visser, E.J., Vandenboorn, E.M.F., Sheng, C., Jaishankar, P., Overmans, M.J.A.M., Dutta, S., Neitz, J., Renslo, A., Ottmann, C., Brunsveld, L., Arkin, M.
PDB entry 8azf: Crystal structure of K449E variant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa in complex with adenosine
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2022-09-06
Authors: Arning, A., Malecki, P., Wozniak, K., Brzezinski, K.
PDB entry 8azg: Crystal structure of MreB from Geobacillus stearothermophilus ATCC7953 in complex with ATP
Classification: STRUCTURAL PROTEIN
Source organism: Geobacillus stearothermophilus ATCC 7953
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-09-06
Authors: Li de la Sierra-Gallay, I., Mao, W.
PDB entry 8azi: Structure of SARS-CoV-2 NSP3 macrodomain in complex with 2'-deoxy-ADPR
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-09-06
Authors: Sander, S., Tidow, H., Fliegert, R., Sandmann, M.
PDB entry 8azk: Bovine 20S proteasome, untreated
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-09-06
Authors: Szenkier, N., Arie, M., Matzov, D., Sertchook, R., Carmeli, R., Cascio, P., Stanhill, A., Shalev Benami, M., Navon, A.
PDB entry 8azl: Structure of SARS-CoV-2 NSP3 macrodomain in complex with 2'-deoxy-2'-fluoro-ADPR
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-09-06
Authors: Sander, S., Tidow, H., Fliegert, R., Sandmann, M.
PDB entry 8azm: Structure of SARS-CoV-2 NSP3 macrodomain in complex with 8Br-ADPR
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-09-06
Authors: Sander, S., Tidow, H., Fliegert, R., Sandmann, M.
PDB entry 8azn: Structure of SARS-CoV-2 NSP3 macrodomain in complex with alpha-1-O-Me-ADPR
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-06
Authors: Sander, S., Tidow, H., Fliegert, R., Sandmann, M.
PDB entry 8azo: Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-ethyl-ADP
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-09-06
Authors: Sander, S., Tidow, H., Fliegert, R., Sandmann, M.
PDB entry 8azp: Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-methyl-ADP
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-06
Authors: Sander, S., Tidow, H., Fliegert, R., Sandmann, M.
PDB entry 8azr: KRAS in complex with precursor 1
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-06
Authors: Boettcher, J., Herdeis, L.
PDB entry 8azs: Type I amyloid-beta 42 filaments from high-spin supernatants of aqueous extracts from Alzheimer's disease brains | ABeta42
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-09-06
Authors: Yang, Y., Stern, M.A., Meunier, L.A., Liu, W., Cai, Y.Q., Ericsson, M., Liu, L., Selkoe, J.D., Goedert, M., Scheres, H.W.S.
PDB entry 8azt: Type II amyloid-beta 42 filaments from high-spin supernatants of aqueous extracts from Alzheimer's disease brains | ABeta42
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-09-06
Authors: Yang, Y., Stern, M.A., Meunier, L.A., Liu, W., Cai, Y.Q., Ericsson, M., Liu, L., Selkoe, J.D., Goedert, M., Scheres, H.W.S.
PDB entry 8azu: Paired helical tau filaments from high-spin supernatants of aqueous extracts from Alzheimer's disease brains | PHF Tau
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-09-06
Authors: Yang, Y., Stern, M.A., Meunier, L.A., Liu, W., Cai, Y.Q., Ericsson, M., Liu, L., Selkoe, J.D., Goedert, M., Scheres, H.W.S.
PDB entry 8azv: KRAS in complex with BI-2865
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2022-09-06
Authors: Boettcher, J., Herdeis, L.
PDB entry 8azw: Cryo-EM structure of the plant 60S subunit
Classification: RIBOSOME
Source organism: Nicotiana tabacum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.14 Å
Deposited: 2022-09-06
Authors: Smirnova, J., Loerke, J., Kleinau, G., Schmidt, A., Buerger, J., Meyer, E.H., Mielke, T., Scheerer, P., Bock, R., Spahn, C.M.T., Zoschke, R.
PDB entry 8azx: KRAS-G12C in complex with BI-2865
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2022-09-06
Authors: Boettcher, J., Herdeis, L.
PDB entry 8azy: KRAS-G12D in complex with BI-2865
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2022-09-06
Authors: Boettcher, J., Herdeis, L.
PDB entry 8azz: KRAS-G12V in complex with BI-2865
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2022-09-06
Authors: Boettcher, J., Herdeis, L.
PDB entry 8b00: KRAS-G13D in complex with BI-2865
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2022-09-06
Authors: Boettcher, J., Herdeis, L.
PDB entry 8b01: Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in a nanodisc
Classification: TRANSPORT PROTEIN
Source organism: Helicobacter pylori; Photobacterium profundum SS9; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2022-09-06
Authors: Davies, J.S., North, R.A., Dobson, R.C.J.
PDB entry 8b02: Crystal structure of the dsRBD domain of tRNA-dihydrouridine(20) synthase from Amphimedon queenslandica
Classification: RNA BINDING PROTEIN
Source organism: Amphimedon queenslandica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.676 Å
Deposited: 2022-09-07
Authors: Pecqueur, L., Faivre, B., Hamdane, D.
PDB entry 8b03: TRYPTOPHAN SYNTHASE - Cryo-trapping by the spitrobot crystal plunger after 0 sec
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-09-07
Authors: Mehrabi, P., Sung, S., von Stetten, D., Prester, A., Hatton, C.E., Kleine-Dopke, S., Berkes, A., Gore, G., Leimkohl, J.P., Schikora, H., Kollewe, M., Rohde, H., Wilmanns, M., Tellkamp, F., Schulz, E.C.
PDB entry 8b04: STRUCTURE OF PORCINE PANCREATIC ELASTASE BOUND TO A FRAGMENT OF AN ISOXAZOLONE INHIBITOR
Classification: LYASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-07
Authors: Ferraroni, M., Giovannoni, P., Masini, V.
PDB entry 8b05: TRYPTOPHAN SYNTHASE - Cryo-trapping by the spitrobot crystal plunger after 20 sec
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-09-07
Authors: Mehrabi, P., Sung, S., von Stetten, D., Prester, A., Hatton, C.E., Kleine-Dopke, S., Berkes, A., Gore, G., Leimkohl, J.P., Schikora, H., Kollewe, M., Rohde, H., Wilmanns, M., Tellkamp, F., Schulz, E.C.
PDB entry 8b06: TRYPTOPHAN SYNTHASE - Cryo-trapping by the spitrobot crystal plunger after 25 sec
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2022-09-07
Authors: Mehrabi, P., Sung, S., von Stetten, D., Prester, A., Hatton, C.E., Kleine-Dopke, S., Berkes, A., Gore, G., Leimkohl, J.P., Schikora, H., Kollewe, M., Rohde, H., Wilmanns, M., Tellkamp, F., Schulz, E.C.
PDB entry 8b07: Crystal structure of monkeypox virus methyltransferase VP39 in complex with sinefungin
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-09-07
Authors: Silhan, J., Klima, M., Boura, E.
PDB entry 8b08: TRYPTOPHAN SYNTHASE - Cryo-trapping by the spitrobot crystal plunger after 30 sec
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-09-07
Authors: Mehrabi, P., Sung, S., von Stetten, D., Prester, A., Hatton, C.E., Kleine-Dopke, S., Berkes, A., Gore, G., Leimkohl, J.P., Schikora, H., Kollewe, M., Rohde, H., Wilmanns, M., Tellkamp, F., Schulz, E.C.
PDB entry 8b0a: Cryo-EM structure of ALC1 bound to an asymmetric, site-specifically PARylated nucleosome
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-09-07
Authors: Bacic, L., Gaullier, G., Deindl, S.
PDB entry 8b0b: Crystal structure of human heparanase in complex with covalent inhibitor VB151
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-09-07
Authors: Armstrong, Z., Davies, G.J.
PDB entry 8b0c: Crystal structure of human heparanase in complex with covalent inhibitor VB158
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-09-07
Authors: Armstrong, Z., Davies, G.
PDB entry 8b0d: Crystal structure of beta-glucuronidase from Acidobacterium capsulatum in complex with covalent inhibitor VB151
Classification: HYDROLASE
Source organism: Acidobacterium capsulatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2022-09-07
Authors: Armstrong, Z., Davies, G.J.
PDB entry 8b0e: Crystal structure of beta-glucuronidase from Acidobacterium capsulatum in complex with covalent inhibitor VB158
Classification: HYDROLASE
Source organism: Acidobacterium capsulatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-09-07
Authors: Armstrong, Z., Davies, G.J.
PDB entry 8b0f: CryoEM structure of C5b8-CD59
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-09-07
Authors: Bubeck, D., Couves, E.C., Gardner, S.
PDB entry 8b0g: 2C9, C5b9-CD59 structure
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-09-07
Authors: Couves, E.C., Gardner, S., Bubeck, D.
PDB entry 8b0h: 2C9, C5b9-CD59 cryoEM structure
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-09-07
Authors: Couves, E.C., Gardner, S., Bubeck, D.
PDB entry 8b0i: CryoEM structure of bacterial RapZ.GlmZ complex central to the control of cell envelope biogenesis
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.28 Å
Deposited: 2022-09-07
Authors: Islam, M.S., Hardwick, H.W., Chirgadze, D.Y., Luisi, B.F.
PDB entry 8b0j: CryoEM structure of bacterial RNaseE.RapZ.GlmZ complex central to the control of cell envelope biogenesis
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.99 Å
Deposited: 2022-09-07
Authors: Islam, M.S., Hardwick, H.W., Chirgadze, D.Y., Luisi, B.F.
PDB entry 8b0k: Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli (Apo form)
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-09-07
Authors: Degtjarik, O., Smithers, L., Boland, C., Caffrey, M., Shalev Benami, M.
PDB entry 8b0l: Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with PE
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2022-09-07
Authors: Degtjarik, O., Smithers, L., Boland, C., Caffrey, M., Shalev Benami, M.
PDB entry 8b0m: Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with PE (C387S mutant)
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2022-09-07
Authors: Degtjarik, O., Smithers, L., Boland, C., Caffrey, M., Shalev Benami, M.
PDB entry 8b0n: Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with Lyso-PE
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2022-09-07
Authors: Degtjarik, O., Smithers, L., Boland, C., Caffrey, M., Shalev Benami, M.
PDB entry 8b0o: Cryo-EM structure apolipoprotein N-acyltransferase Lnt from E.coli in complex with FP3
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2022-09-07
Authors: Degtjarik, O., Smithers, L., Boland, C., Caffrey, M., Shalev Benami, M.
PDB entry 8b0p: Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with Pam3
Classification: TRANSFERASE
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2022-09-07
Authors: Degtjarik, O., Smithers, L., Boland, C., Caffrey, M., Shalev Benami, M.
PDB entry 8b0q: Deinococcus radiodurans UvrC C-terminal half
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-09-08
Authors: Timmins, J., Stelter, M.
PDB entry 8b0r: Structure of the CalpL/cA4 complex
Classification: HYDROLASE
Source organism: Sulfurihydrogenibium; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-09-08
Authors: Schneberger, N., Hagelueken, G.
PDB entry 8b0s: SARS-COV-2 Main Protease adduct with Au(NHC)Cl
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2022-09-08
Authors: Massai, L., Grifagni, D., Desantis, A., Geri, A., Calderone, V., Cantini, F., Messori, L., Banci, L.
PDB entry 8b0t: SARS-CoV-2 Main Protease adduct with Au(PEt3)Br
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-09-08
Authors: Massai, L., Grifagni, D., De Santis, A., Geri, A., Calderone, V., Cantini, F., Banci, L., Messori, L.
PDB entry 8b0u: Structure of the CalpL/T10 complex
Classification: HYDROLASE
Source organism: Sulfurihydrogenibium
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2022-09-08
Authors: Schneberger, N., Hagelueken, G.
PDB entry 8b0v: Crystal structure of C-terminal domain of Pseudomonas aeruginosa LexA G91D mutant
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-09-08
Authors: Vascon, F., De Felice, S., Chinellato, M., Maso, L., Cendron, L.
PDB entry 8b0w: Galectin-1 in Complex with Ligand MG49
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2022-09-08
Authors: Grimm, C., Mut, J., Seibel, J.
PDB entry 8b0x: Translating 70S ribosome in the unrotated state (P and E, tRNAs)
Classification: RIBOSOME
Source organism: Escherichia coli B; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.55 Å
Deposited: 2022-09-08
Authors: Fromm, S.A., O'Connor, K.M., Purdy, M., Bhatt, P.R., Loughran, G., Atkins, J.F., Jomaa, A., Mattei, S.
PDB entry 8b0y: cryo-EM structure of carboxysomal mini-shell: icosahedral assembly from CsoS4A/1A co-expression (T = 3)
Classification: STRUCTURAL PROTEIN
Source organism: Halothiobacillus neapolitanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2022-09-08
Authors: Ni, T., Jiang, Q., Liu, L.N., Zhang, P.
PDB entry 8b0z: Galectin-1 in Complex with Ligand JM171
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2022-09-08
Authors: Grimm, C., Mut, J., Seibel, J.
PDB entry 8b10: Crystal Structure of Shank2-SAM mutant domain - L1800W
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-09-08
Authors: Bento, I., Gracia Alai, M., Kreienkamp, J.-H.
PDB entry 8b11: cryo-EM structure of carboxysomal mini-shell: icosahedral assembly from CsoS4A/1A and CsoS2 co-expression (T = 4)
Classification: STRUCTURAL PROTEIN
Source organism: Halothiobacillus neapolitanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2022-09-08
Authors: Ni, T., Jiang, Q., Liu, L.N., Zhang, P.
PDB entry 8b12: cryo-EM structure of carboxysomal mini-shell: icosahedral assembly from CsoS4A/1A and CsoS2 co-expression (T = 9)
Classification: STRUCTURAL PROTEIN
Source organism: Halothiobacillus neapolitanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.86 Å
Deposited: 2022-09-09
Authors: Ni, T., Jiang, Q., Liu, L.N., Zhang, P.
PDB entry 8b14: T5 Receptor Binding Protein pb5 in complex with its E. coli receptor FhuA
Classification: VIRAL PROTEIN
Source organism: Escherichia coli; Escherichia phage T5
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-09-09
Authors: Degroux, S., Effantin, G., Linares, R., Schoehn, G., Breyton, C.
PDB entry 8b15: A pentameric barrel state of a de novo coiled-coil assembly: CC-Pent2-I10Q
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-09-09
Authors: Martin, F.J.O., Dawson, W.M., Woolfson, D.N.
PDB entry 8b16: A hexameric barrel state of a de novo coiled-coil assembly: CC-Pent2-I17Q
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-09-09
Authors: Martin, F.J.O., Dawson, W.M., Woolfson, D.N.
PDB entry 8b17: DtpB-Nb132-AWA
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b18: DtpB-Nb132-AF
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b19: DtpB-Nb132-AFA
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1a: DtpB-Nb132-AI
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1b: DtpB-Nb132-AL
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1c: DtpB-Nb132-ALA
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1d: DtpB-Nb132-APF
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1e: DtpB-Nb132-AQ
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1f: DtpB-Nb132-AV
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1g: DtpB-Nb132-AW
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1h: DtpB-Nb132-KV
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1i: DtpB-Nb132-MS
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1j: DtpB-Nb132-SL
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1k: DtpB-Nb132-NV
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-09-09
Authors: Killer, M., Finocchio, G., Lei, J., Jungnickel, K., Kotov, V., Steinke, J., Bartels, K., Strauss, J., Dupeux, F., Humm, A.S., Cornaciu, I., Marquez, J., Pardon, E., Steyeart, J., Loew, C.
PDB entry 8b1l: NMR structure of the antimicrobial peptide Of-Pis1 in DPC micelles
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-09-10
Authors: Alaimo, N., Bischetti, M., Gallo, M., Cicero, D.O.
PDB entry 8b1n: Crystal structure of TrmD-Tm1570 from Calditerrivibrio nitroreducens in complex with S-adenosyl-L-methionine
Classification: TRANSFERASE
Source organism: Calditerrivibrio nitroreducens DSM 19672
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-09-10
Authors: Kluza, A., Lewandowska, I., Augustyniak, R., Sulkowska, J.
PDB entry 8b1o: Crystal structure of SUDV VP40 C314S mutant
Classification: VIRAL PROTEIN
Source organism: Sudan ebolavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-09-11
Authors: Werner, A.-D., Becker, S.
PDB entry 8b1p: Crystal structure of SUDV VP40 CCS mutant
Classification: VIRAL PROTEIN
Source organism: Sudan ebolavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-09-11
Authors: Werner, A.-D., Becker, S.
PDB entry 8b1r: RecBCD in complex with the phage protein gp5.9
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli; Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-09-12
Authors: Wilkinson, M., Wilkinson, O.J., Feyerherm, C., Fletcher, E.E., Wigley, D.B., Dillingham, M.S.