LiteFold/PDB huggingface dataset:
PDB entry 4yp0: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 5-aminoisoquinoline (Chem 79)
Classification: Ligase/Ligase Inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-03-12
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yp1: Misting with CDA
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-03-12
Authors: Chin, K.H., Chen, C.K., Tu, Z.I., Chou, S.H.
PDB entry 4yp2: Cleavage of nicotinamide adenine dinucleotides by the ribosome inactivating protein from Momordica charantia
Classification: HYDROLASE
Source organism: Momordica charantia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2015-03-12
Authors: Vinkovic, M., Hussain, J., Wood, G.E., Gill, R., Wood, S.P.
PDB entry 4yp3: Mutant Human DNA Polymerase Eta Q38A/R61A Inserting dCTP Opposite an 8-Oxoguanine Lesion
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2015-03-12
Authors: Su, Y., Patra, A., Harp, J.M., Egli, M., Guengerich, F.P.
PDB entry 4yp5: Crystal structure of Methanobacterium thermoautotrophicum NMNAT in complex with NADP
Classification: TRANSFERASE
Source organism: Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2015-03-12
Authors: Pfoh, R., Christendat, D., Pai, E.F., Saridakis, V.
PDB entry 4yp6: Crystal structure of Methanobacterium thermoautotrophicum NMNAT in complex with NADP
Classification: TRANSFERASE
Source organism: Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-03-12
Authors: Pfoh, R., Christendat, D., Pai, E.F., Saridakis, V.
PDB entry 4yp7: Crystal structure of Methanobacterium thermoautotrophicum NMNAT in complex with NADP
Classification: TRANSFERASE
Source organism: Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-03-12
Authors: Pfoh, R., Christendat, D., Pai, E.F., Saridakis, V.
PDB entry 4yp8: Irak4-inhibitor co-structure
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.641 Å
Deposited: 2015-03-12
Authors: Fischmann, T.O.
PDB entry 4yp9: Crystal Structure of LuxP In Complex With a Formose Derived AI-2 Analogue
Classification: PROTEIN BINDING
Source organism: Vibrio harveyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-03-12
Authors: McDonough, M.A., Sattin, S., Gardner, P.M., Liu, C., Davis, B.G.
PDB entry 4ypa: ASH1L SET domain Q2265A mutant in complex with S-adenosyl methionine (SAM)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-03-12
Authors: Rogawski, D.S., Ndoj, J., Cho, H.J., Maillard, I., Grembecka, J., Cierpicki, T.
PDB entry 4ypb: Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codon
Classification: RIBOSOME
Source organism: Escherichia coli; Proteus vulgaris; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2015-03-12
Authors: Schureck, M.A., Dunkle, J.A., Maehigashi, T., Dunham, C.M.
PDB entry 4ypc: Trimeric crystal structure of vimentin coil1B fragment
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2015-03-12
Authors: Chernyatina, A.A., Strelkov, S.V.
PDB entry 4ypd: Crystal Structure of DAPK1 catalytic domain in complex with the hinge binding fragment 4-methylpyridazine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2015-03-12
Authors: Grum-Tokars, V.L., Minasov, G., Roy, S.M., Anderson, W.F., Watterson, D.M.
PDB entry 4ype: ASH1L SET domain H2193F mutant in complex with S-adenosyl methionine (SAM)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-12
Authors: Rogawski, D.S., Ndoj, J., Cho, H.J., Maillard, I., Grembecka, J., Cierpicki, T.
PDB entry 4ypf: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with quinolin-3-amine (Chem 84)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-12
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4ypg: Structural Insights Into the Neutralization Properties of a Human Anti-Interferon Monoclonal Antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-03-12
Authors: Oganesyan, V., Dall'Acqua, W.F.
PDB entry 4yph: Crystal Structure of MutY bound to its anti-substrate with the disulfide cross-linker reduced
Classification: Hydrolase/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2015-03-12
Authors: Wang, L., Lee, S., Verdine, G.L.
PDB entry 4ypi: Structure of Ebola virus nucleoprotein N-terminal fragment bound to a peptide derived from Ebola VP35
Classification: RNA BINDING PROTEIN
Source organism: Zaire ebolavirus (strain Mayinga-76); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.71 Å
Deposited: 2015-03-13
Authors: Leung, D.W., Borek, D.M., Binning, J.M., Otwinowski, Z., Amarasinghe, G.K., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4ypj: X-ray Structure of The Mutant of Glycoside Hydrolase
Classification: HYDROLASE
Source organism: Bacillus circulans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-03-13
Authors: Ishikawa, K., Kataoka, M., Yanamoto, T., Nakabayashi, M., Watanabe, M.
PDB entry 4ypl: Crystal structure of a hexameric LonA protease bound to three ADPs
Classification: HYDROLASE
Source organism: Meiothermus taiwanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2015-03-13
Authors: Lin, C.-C., Chang, C.-I.
PDB entry 4ypm: Crystal structure of a LonA protease domain in complex with bortezomib
Classification: HYDROLASE
Source organism: Meiothermus taiwanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-03-13
Authors: Lin, C.-C., Chang, C.-I.
PDB entry 4ypn: Crystal structure of a LonA fragment containing the 3-helix bundle and the AAA-alpha/beta domain
Classification: HYDROLASE
Source organism: Meiothermus taiwanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2015-03-13
Authors: Chang, C.-I., Lin, C.-C.
PDB entry 4ypo: Crystal structure of Mycobacterium tuberculosis ketol-acid reductoisomerase in complex with Mg2+
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.001 Å
Deposited: 2015-03-13
Authors: Lv, Y., Guddat, L.W.
PDB entry 4ypq: Crystal structure of the ROR(gamma)t ligand binding domain in complex with 4-(1-(2-chloro-6-(trifluoromethyl)benzoyl)-1H-indazol-3-yl)benzoic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2015-03-13
Authors: Leysen, S., Scheepstra, M., van Almen, G.C., Ottmann, C., Brunsveld, L.
PDB entry 4ypr: Crystal Structure of D144N MutY bound to its anti-substrate
Classification: Hydrolase/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2015-03-13
Authors: Wang, L., Lee, S., Verdine, G.L.
PDB entry 4yps: (R)-2-Phenylpyrrolidine Substitute Imidazopyridazines: a New Class of Potent and Selective Pan-TRK Inhibitors
Classification: Transfease/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1012 Å
Deposited: 2015-03-13
Authors: Kreusch, A., Rucker, P., Molteni, V., Loren, J.
PDB entry 4ypt: X-ray structural of three tandemly linked domains of nsp3 from murine hepatitis virus at 2.60 Angstroms resolution
Classification: HYDROLASE
Source organism: Murine coronavirus (strain A59)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6009 Å
Deposited: 2015-03-13
Authors: Chen, Y., Savinov, S.N., Mielech, A.M., Cao, T., Baker, S.C., Mesecar, A.D.
PDB entry 4ypu: ASH1L SET domain K2264L mutant in complex with S-adenosyl methionine (SAM)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-03-13
Authors: Rogawski, D.S., Ndoj, J., Cho, H.J., Maillard, I., Grembecka, J., Cierpicki, T.
PDB entry 4ypv: High-resolution structure of a metagenome-derived esterase Est8
Classification: HYDROLASE
Source organism: Parvibaculum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-03-13
Authors: Pereira, M.R., Maester, C.T., Macedo Lemos, E., Hyvonen, M., Balan, A.
PDB entry 4ypw: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.311 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4ypx: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4ypy: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4ypz: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yq0: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yq1: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P., Stuckey, J.A.
PDB entry 4yq2: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G.
PDB entry 4yq3: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yq4: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yq5: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yq6: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G.
PDB entry 4yq7: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G.
PDB entry 4yq8: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P., Stuckey, J.A.
PDB entry 4yq9: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yqa: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yqb: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yqc: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yqd: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P.
PDB entry 4yqe: Crystal structure of E. coli WrbA in complex with benzoquinone
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2015-03-13
Authors: Degtjarik, O., Brynda, J., Ettrichova, O., Carey, J., Kuta Smatanova, I., Ettrich, R.
PDB entry 4yqf: GTPase domain of Human Septin 9
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2015-03-13
Authors: Matos, S.O., Leonardo, D.A., Macedo, J.N., Pereira, H.M., Araujo, A.P.U., Garratt, R.C.
PDB entry 4yqg: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.858 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Williams, S.P., Stuckey, J.A.
PDB entry 4yqh: 2-[2-(4-Phenyl-1H-imidazol-2-yl)ethyl]quinoxaline (Sunovion Compound 14) co-crystallized with PDE10A
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.308 Å
Deposited: 2015-03-13
Authors: Burdi, D., Herman, L., Wang, T.
PDB entry 4yqi: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P., Stuckey, J.A.
PDB entry 4yqj: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yqk: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P., Stuckey, J.A.
PDB entry 4yql: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.401 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P.
PDB entry 4yqm: Glutathione S-transferase Omega 1 bound to covalent inhibitor C1-27
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2015-03-13
Authors: Stuckey, J.A.
PDB entry 4yqn: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P.
PDB entry 4yqo: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P.
PDB entry 4yqp: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P.
PDB entry 4yqq: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yqr: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yqs: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.902 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G., Stuckey, J.A.
PDB entry 4yqt: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: transferase/transferase inhibitor
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-03-13
Authors: Elkins, P.A., Bonnette, W.G.
PDB entry 4yqu: Glutathione S-transferase Omega 1 bound to covalent inhibitor C1-31
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-03-13
Authors: Stuckey, J.A.
PDB entry 4yqv: Glutathione S-transferase Omega 1 bound to covalent inhibitor C4-10
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2015-03-13
Authors: Stuckey, J.A.
PDB entry 4yqw: Mutant Human DNA Polymerase Eta Q38A/R61A Inserting dCTP Opposite Template G
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.064 Å
Deposited: 2015-03-13
Authors: Su, Y., Patra, A., Harp, J.M., Egli, M., Guengerich, F.P.
PDB entry 4yqx: Mouse IL-2 Bound to JES6-1 scFv Fragment
Classification: CYTOKINE/IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.826 Å
Deposited: 2015-03-13
Authors: Spangler, J.B., Luca, V.C., Jude, K.M., Garcia, K.C.
PDB entry 4yqy: Crystal Structure of a putative Dehydrogenase from Sulfitobacter sp. (COG1028) (TARGET EFI-513936) in its APO form
Classification: OXIDOREDUCTASE
Source organism: Sulfitobacter sp. NAS-14.1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.381 Å
Deposited: 2015-03-13
Authors: Yadava, U., Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Koss, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4yqz: Crystal Structure of a putative oxidoreductase from Thermus Thermophilus HB27 (TT_P0034, TARGET EFI-513932) in its APO form
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.807 Å
Deposited: 2015-03-13
Authors: Yadava, U., Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Koss, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4yr0: Mutant Human DNA Polymerase Eta R61M Inserting dCTP Opposite an 8-Oxoguanine Lesion
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2015-03-13
Authors: Su, Y., Patra, A., Harp, J.M., Egli, M., Guengerich, F.P.
PDB entry 4yr1: Crystal Structure of E. Coli Alkaline Phosphatase D101A/D153A in complex with inorganic phosphate
Classification: HYDROLASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2015-03-13
Authors: Peck, A., Herschlag, D.
PDB entry 4yr2: Mutant Human DNA Polymerase Eta R61M Inserting dATP Opposite an 8-Oxoguanine Lesion
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-03-14
Authors: Su, Y., Patra, A., Harp, J.M., Egli, M., Guengerich, F.P.
PDB entry 4yr3: Mutant Human DNA Polymerase Eta R61M Inserting dCTP Opposite Template G
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-03-14
Authors: Su, Y., Patra, A., Harp, J.M., Egli, M., Guengerich, F.P.
PDB entry 4yr6: Fab fragment of 5G6 in complex with epitope peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2015-03-14
Authors: Tao, Y., Mo, X., Li, R.
PDB entry 4yr7: Structure of LuxP In Complex With 1-deoxy-alpha-L-xylulofuranose-1,2-borate
Classification: SIGNALING PROTEIN
Source organism: Vibrio harveyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.533 Å
Deposited: 2015-03-14
Authors: McDonough, M.A., Sattin, S., Davis, B.G.
PDB entry 4yr8: Crystal structure of JNK in complex with a regulator protein
Classification: TRANSFERASE/HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-03-14
Authors: Liu, X., Wang, J., Wu, J.W., Wang, Z.X.
PDB entry 4yr9: mouse TDH with NAD+ bound
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-03-14
Authors: He, C., Li, F.
PDB entry 4yra: mouse TDH in the apo form
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-03-14
Authors: He, C., Li, F.
PDB entry 4yrb: mouse TDH mutant R180K with NAD+ bound
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2015-03-14
Authors: He, C., Li, F.
PDB entry 4yrc: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 2-aminoquinolin-8-ol (Chem 89)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrd: Crystal structure of CapF with inhibitor 3-isopropenyl-tropolone
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Staphylococcus aureus (strain Mu50 / ATCC 700699)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2015-03-15
Authors: Nakano, K., Chigira, T., Miyafusa, T., Nagatoishi, S., Caaveiro, J.M.M., Tsumoto, K.
PDB entry 4yre: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with (2-bromophenyl)methanol (Chem 145)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrf: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 5-bromopyridin-2(1H)-one (Chem 148)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrg: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with (6-bromopyridin-2-yl)methanol (Chem 149)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrh: p21 isoform of MEC-17 from Danio Rerio
Classification: TRANSFERASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.861 Å
Deposited: 2015-03-15
Authors: Xue, T.
PDB entry 4yri: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 1-(3-bromophenyl)methanamine (Chem 166)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrj: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 4-chlorobenzene-1,2-diamine (Chem 256)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrk: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with (4-chlorophenyl)methanol (Chem 260)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrl: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 4-(methylsulfanyl)aniline (Chem 262)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrm: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 3-methoxypyridine (Chem 443)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrn: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 6-bromopyridin-3-amine (Chem 475)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yro: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 5-bromo-6-methylpyridin-2-amine (Chem 491)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrp: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 1-(4-BROMOPHENYL)METHANAMINE (Chem 707)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrq: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 6-amino-2H-chromen-2-one (Chem 744)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrr: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with N-(quinolin-3-yl)acetamide (Chem 1691)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrs: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with N-(quinolin-3-yl)propanamide (Chem 1698)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yrt: Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with N-(5-hydroxynaphthalen-2-yl)propanamide (Chem 1781)
Classification: Ligase/Ligase inhibitor
Source organism: Trypanosoma cruzi (strain CL Brener)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-03-15
Authors: Koh, C.-Y., Hol, W.G.J.
PDB entry 4yru: Crystal structure of C-terminally truncated Neuronal Calcium Sensor (NCS-1) from Rattus norvegicus
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-03-15
Authors: Pandalaneni, S., Karrupiah, V., Mayans, O., Derrick, J.P., Lian, L.Y.
PDB entry 4yrv: Crystal structure of Anabaena transcription factor HetR complexed with 21-bp DNA from hetP promoter
Classification: TRANSCRIPTION/DNA
Source organism: Nostoc sp. PCC 7120; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-03-16
Authors: Hu, H.X., Jiang, Y.L., Zhao, M.X., Zhang, C.C., Chen, Y., Zhou, C.Z.
PDB entry 4yrw: rat xanthine oxidoreductase, C-terminal deletion protein variant
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2015-03-16
Authors: Okamoto, K.
PDB entry 4yry: Insights into flavin-based electron bifurcation via the NADH-dependent reduced ferredoxin-NADP oxidoreductase structure
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-03-16
Authors: Ermler, U., Thauer, R.K., Demmer, J.K., Huang, H., Wang, S., Demmer, U.
PDB entry 4yrz: Crystal Structure of LuxP In Complex With L-xylulofuranose-1,2-borate
Classification: SIGNALING PROTEIN
Source organism: Vibrio harveyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.571 Å
Deposited: 2015-03-16
Authors: McDonough, M.A., Sattin, S., Gardner, P.M., Liu, C., Davis, B.G.
PDB entry 4ys0: Conformational changes of the clamp of the protein translocation ATPase SecA from Thermotoga maritima
Classification: PROTEIN TRANSPORT
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.897 Å
Deposited: 2015-03-16
Authors: Chen, Y., Rapoport, T.A.
PDB entry 4ys1: Human Aldose Reductase complexed with a ligand with an IDD structure (2) at 1.07 A.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2015-03-16
Authors: Rechlin, C., Heine, A., Klebe, G.
PDB entry 4ys2: RCK domain with CDA
Classification: IMMUNE SYSTEM
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.968 Å
Deposited: 2015-03-16
Authors: Chin, K.H., Chou, S.H.
PDB entry 4ys3: Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-03-16
Authors: Dechassa, M.L., Luger, K., Chatterjee, N., North, J.A., Manohar, M., Prasad, R., Ottessen, J.J., Poirier, M.G., Bartholomew, B.
PDB entry 4ys4: Crystal structure of Pf41 tandem 6-cys domains from Plasmodium falciparum
Classification: IMMUNE SYSTEM
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2015-03-16
Authors: Parker, M.L., Peng, F., Boulanger, M.J.
PDB entry 4ys5: DNA sequence containing 2'-Se-dC modification
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-03-16
Authors: Kong, C., Zhang, W., Salon, J., Huang, Z.
PDB entry 4ys6: CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTANS (Cphy_1585, TARGET EFI-511156) WITH BOUND BETA-D-GLUCOSE
Classification: SOLUTE-BINDING PROTEIN
Source organism: Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2015-03-16
Authors: Vetting, M.W., Patskovsky, Y., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Koss, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4ys7: Co-crystal structure of 2-[2-(5,8-dimethyl[1,2,4]triazolo[1,5-a]pyrazin-2-yl)ethyl]-3-methyl-3H-imidazo[4,5-f]quinoline (compound 39) with PDE10A
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.502 Å
Deposited: 2015-03-16
Authors: Burdi, D.F., Herman, L., Wang, T.
PDB entry 4ys8: Crystal Structure of 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (IspD) from Burkholderia thailandensis
Classification: TRANSFERASE
Source organism: Burkholderia thailandensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2015-03-16
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4ys9: Ataxin-3 Carboxy-Terminal Region - Crystal C1 (tetragonal)
Classification: TRANSCRIPTION
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-03-16
Authors: Zhemkov, V.A., Kim, M.
PDB entry 4ysa: Completely oxidized structure of copper nitrite reductase from Geobacillus thermodenitrificans
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4ysb: Crystal structure of ETHE1 from Myxococcus xanthus
Classification: HYDROLASE
Source organism: Myxococcus xanthus (strain DK 1622)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5015 Å
Deposited: 2015-03-17
Authors: Sattler, S.A., Wang, X., DeHan, P.J., Xun, L., Kang, C.
PDB entry 4ysc: Completely oxidized structure of copper nitrite reductase from Alcaligenes faecalis
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4ysd: Room temperature structure of copper nitrite reductase from Geobacillus thermodenitrificans
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4yse: High resolution synchrotron structure of copper nitrite reductase from Alcaligenes faecalis
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4ysf: Resting state of rat cysteine dioxygenase H155N variant
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-03-17
Authors: Fellner, M., Tchesnokov, E.P., Jameson, G.N.L., Wilbanks, S.M.
PDB entry 4ysh: Crystal structure of glycine oxidase from Geobacillus kaustophilus
Classification: OXIDOREDUCTASE
Source organism: Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-17
Authors: Shiono, T., Nomura, T., Arai, R.
PDB entry 4ysi: Structure of USP7 with a novel viral protein
Classification: HYDROLASE/Peptide
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2015-03-17
Authors: Chavoshi, S., Saridakis, V.
PDB entry 4ysj: Calcium-Dependent Protein Kinase from Eimeria tenella in complex with ADP
Classification: TRANSFERASE
Source organism: Eimeria tenella
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-03-17
Authors: Merritt, E.A.
PDB entry 4ysk: Crystal structure of apo-form SdoA from Pseudomonas putida
Classification: HYDROLASE
Source organism: Pseudomonas putida (strain F1 / ATCC 700007)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.466 Å
Deposited: 2015-03-17
Authors: Sattler, S.A., Wang, X., DeHan, P.J., Xun, L., Kang, C.
PDB entry 4ysl: Crystal structure of SdoA from Pseudomonas putida in complex with glutathione
Classification: HYDROLASE
Source organism: Pseudomonas putida (strain F1 / ATCC 700007)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4618 Å
Deposited: 2015-03-17
Authors: Sattler, S.A., Wang, X., DeHan, P.J., Xun, L., Kang, C.
PDB entry 4ysm: Calcium-Dependent Protein Kinase from Eimeria tenella
Classification: TRANSFERASE
Source organism: Eimeria tenella
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2015-03-17
Authors: Merritt, E.A.
PDB entry 4ysn: Structure of aminoacid racemase in complex with PLP
Classification: ISOMERASE
Source organism: Lactobacillus buchneri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-03-17
Authors: Sakuraba, H., Mutaguchi, Y., Hayashi, J., Ohshima, T.
PDB entry 4yso: Copper nitrite reductase from Geobacillus thermodenitrificans - 0.064 MGy
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4ysp: Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 8.32 MGy
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diedrichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4ysq: Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 8.38 MGy
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4ysr: Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 16.6 MGy
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4yss: Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 16.7 MGy
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diedrichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4yst: Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 24.9 MGy
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4ysu: Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 25.0 MGy
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-03-17
Authors: Fukuda, Y., Tse, K.M., Suzuki, M., Diederichs, K., Hirata, K., Nakane, T., Sugahara, M., Nango, E., Tono, K., Joti, Y., Kameshima, T., Song, C., Hatsui, T., Yabashi, M., Nureki, O., Matsumura, H., Inoue, T., Iwata, S., Mizohata, E.
PDB entry 4ysv: Structure of aminoacid racemase in apo-form
Classification: ISOMERASE
Source organism: Lactobacillus buchneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2015-03-17
Authors: Sakuraba, H., Mutaguchi, Y., Hayashi, J., Ohshima, T.
PDB entry 4ysw: Structure of rat xanthine oxidoreductase, C-terminal deletion protein variant, NADH bound form
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2015-03-17
Authors: Nishino, T., Okamoto, K., Kawaguchi, Y., Matsumura, T., Eger, B.T., Pai, E.F.
PDB entry 4ysx: Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with the specific inhibitor NN23
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Ascaris suum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-03-17
Authors: Harada, S., Shiba, T., Sato, D., Yamamoto, A., Nagahama, M., Yone, A., Inaoka, D.K., Sakamoto, K., Inoue, M., Honma, T., Kita, K.
PDB entry 4ysy: Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with N-[(2,4-dichlorophenyl)methyl]-2-(trifluoromethyl)benzamide
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Ascaris suum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2015-03-17
Authors: Harada, S., Shiba, T., Sato, D., Yamamoto, A., Nagahama, M., Yone, A., Inaoka, D.K., Sakamoto, K., Inoue, M., Honma, T., Kita, K.
PDB entry 4ysz: Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with 2-iodo-N-[3-(1-methylethoxy)phenyl]benzamide
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Ascaris suum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2015-03-17
Authors: Harada, S., Shiba, T., Sato, D., Yamamoto, A., Nagahama, M., Yone, A., Inaoka, D.K., Sakamoto, K., Inoue, M., Honma, T., Kita, K.
PDB entry 4yt0: Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with 2-methyl-N-[3-(1-methylethoxy)phenyl]benzamide.
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Ascaris suum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.66 Å
Deposited: 2015-03-17
Authors: Harada, S., Shiba, T., Sato, D., Yamamoto, A., Nagahama, M., Yone, A., Inaoka, D.K., Sakamoto, K., Inoue, M., Honma, T., Kita, K.
PDB entry 4yt1: Human PPAR Gamma Ligand Binding Domain in complex with a Gammma Selective Synthetic Partial Agonist MEKT76
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-17
Authors: Oyama, T., Ohashi, M., Miyachi, H., Kusunoki, M.
PDB entry 4yt2: Hmd II from Methanocaldococcus jannaschii
Classification: METAL BINDING PROTEIN
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-03-17
Authors: Fujishiro, T., Ermler, U., Shima, S.