LiteFold/PDB huggingface dataset:
PDB entry 3icv: Structural Consequences of a Circular Permutation on Lipase B from Candida Antartica
Classification: HYDROLASE
Source organism: Candida antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2009-07-18
Authors: Horton, J.R., Qian, Z., Jia, D., Lutz, S., Cheng, X.
PDB entry 3icw: Structure of a Circular Permutation on Lipase B from Candida Antartica with Bound Suicide Inhibitor
Classification: HYDROLASE
Source organism: Candida antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2009-07-18
Authors: Horton, J.R., Qian, Z., Jia, D., Lutz, S.A., Cheng, X.
PDB entry 3icx: Crystal structure of Sulfolobus solfataricus Nop5 (135-380)
Classification: RNA BINDING PROTEIN
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-07-19
Authors: Ye, K.
PDB entry 3icy: The crystal structure of sensory box histidine kinase/response regulator domain from Chlorobium tepidum TLS
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Chlorobaculum tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.684 Å
Deposited: 2009-07-19
Authors: Wu, R., Shonda, C., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3icz: Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with 1-(2,2-Bis-phosphono-ethyl)-3-butyl-pyridinium and isopentenyl pyrophosphate
Classification: TRANSFERASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-07-19
Authors: Amzel, L.M., Huang, C.H., Gabelli, S.B., Oldfield, E.
PDB entry 3id0: Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with 3-Fluoro-1-(2-hydroxy-2,2-bisphosphono-ethyl)pyridinium
Classification: TRANSFERASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2009-07-19
Authors: Amzel, L.M., Huang, C.H., Gabelli, S.B., Oldfield, E.
PDB entry 3id1: Crystal Structure of RseP PDZ1 domain
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2009-07-20
Authors: Li, X., Wang, B., Feng, L., Wang, J., Shi, Y.
PDB entry 3id2: Crystal Structure of RseP PDZ2 domain
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.089 Å
Deposited: 2009-07-20
Authors: Li, X., Wang, B., Feng, L., Wang, J., Shi, Y.
PDB entry 3id3: Crystal Structure of RseP PDZ2 I304A domain
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2009-07-20
Authors: Li, X., Wang, B., Feng, L., Wang, J., Shi, Y.
PDB entry 3id4: Crystal Structure of RseP PDZ2 domain fused GKASPV peptide
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.604 Å
Deposited: 2009-07-20
Authors: Li, X., Wang, B., Feng, L., Wang, J., Shi, Y.
PDB entry 3id5: Crystal structure of Sulfolobus solfataricus C/D RNP assembled with Nop5, fibrillarin, L7Ae and a split half C/D RNA
Classification: TRANSFERASE/RIBOSOMAL PROTEIN/RNA
Source organism: Sulfolobus solfataricus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.01 Å
Deposited: 2009-07-20
Authors: Ye, K.
PDB entry 3id6: Crystal structure of Sulfolobus solfataricus Nop5 (1-262) and fibrillarin complex
Classification: TRANSFERASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-20
Authors: Ye, K.
PDB entry 3id7: Crystal structure of renal dipeptidase from Streptomyces coelicolor A3(2)
Classification: HYDROLASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-07-20
Authors: Fedorov, A.A., Fedorov, E.V., Cummings, J., Raushel, F.M., Almo, S.C.
PDB entry 3id8: Ternary complex of human pancreatic glucokinase crystallized with activator, glucose and AMP-PNP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-20
Authors: Petit, P., Gluais, L., Lagarde, A., Boutin, J.A., Ferry, G., Vuillard, L.
PDB entry 3id9: Crystal structure of a MutT/NUDIX family protein from Bacillus thuringiensis
Classification: HYDROLASE
Source organism: Bacillus thuringiensis str. Al Hakam
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2009-07-20
Authors: Palani, K., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ida: Thermostable Cocaine Esterase with mutations L169K and G173Q, bound to DTT adduct
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-07-20
Authors: Tesmer, J.J.G., Nance, M.R.
PDB entry 3idb: Crystal structure of (108-268)RIIb:C holoenzyme of cAMP-dependent protein kinase
Classification: TRANSFERASE
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2009-07-20
Authors: Brown, S.H.J., Wu, J., Kim, C., Alberto, K., Taylor, S.S.
PDB entry 3idc: Crystal structure of (102-265)RIIb:C holoenzyme of cAMP-dependent protein kinase
Classification: TRANSFERASE
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-07-20
Authors: Brown, S.H.J., Wu, J., Kim, C., Alberto, K., Taylor, S.S.
PDB entry 3idd: Cofactor-Independent Phosphoglycerate Mutase from Thermoplasma acidophilum DSM 1728
Classification: ISOMERASE
Source organism: Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-20
Authors: Joachimiak, A., Duke, N.E.C., Marshall, N., Buck, K., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ide: Structure of IPNV subviral particle
Classification: VIRUS LIKE PARTICLE
Source organism: Infectious pancreatic necrosis virus -
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2009-07-21
Authors: Coulibaly, F., Chevalier, C., Delmas, B., Rey, F.A.
PDB entry 3idf: The Crystal Structure of a USP-like protein from Wolinella succinogenes to 2.0A
Classification: structural genomics, unknown function
Source organism: Wolinella succinogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-21
Authors: Stein, A.J., Sather, A., Shackelford, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3idg: Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ALDKWD
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2009-07-21
Authors: Julien, J.P., Bryson, S., Pai, E.F.
PDB entry 3idh: Human pancreatic glucokinase in complex with glucose
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2009-07-21
Authors: Petit, P., Gluais, L., Lagarde, A., Boutin, J.A., Ferry, G., Vuillard, L.
PDB entry 3idi: Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 Fab' fragment in complex with gp41 Peptide ALDKWNQ
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-21
Authors: Julien, J.-P., Bryson, S., Pai, E.F.
PDB entry 3idj: Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 Fab' fragment in complex with gp41 Peptide analog ELD(Orn)WAS
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2009-07-21
Authors: Julien, J.-P., Bryson, S., Pai, E.F.
PDB entry 3idm: Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 Fab' fragment in complex with gp41 Peptide analog ELD(Nrg)WAS
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2009-07-21
Authors: Julien, J.-P., Bryson, S., Pai, E.F.
PDB entry 3idn: Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 Fab' fragment in complex with gp41 Peptide analog ELD(Paf)WAS
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-07-21
Authors: Julien, J.-P., Bryson, S., Pai, E.F.
PDB entry 3ido: Crystal structure of protein tyrosine phosphatase from Entamoeba histolytica with a phosphotyrosine crude mimic HEPES molecule in the active site
Classification: HYDROLASE
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-21
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3idp: B-Raf V600E kinase domain in complex with an aminoisoquinoline inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-07-21
Authors: Whittington, D.A., Epstein, L.F.
PDB entry 3idq: Crystal structure of S. cerevisiae Get3 at 3.7 Angstrom resolution
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.701 Å
Deposited: 2009-07-21
Authors: Suloway, C.J.M., Chartron, J.W., Zaslaver, M., Clemons Jr., W.M.
PDB entry 3ids: Structure of Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase from Trypanosoma cruzi in complex with the irreversible iodoacetamide inhibitor
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-21
Authors: Balliano, T.L., Guido, R.V.C., Andricopulo, A.D., Oliva, G.
PDB entry 3idu: Crystal Structure of the CARDB domain of the PF1109 protein in complex with di-metal ions from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfR193A
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-21
Authors: Forouhar, F., Neely, H., Seetharaman, J., Mao, M., Xiao, R., Ciccosanti, C., Lee, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3idv: Crystal structure of the a0a fragment of ERp72
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-07-21
Authors: Kozlov, G., Gehring, K.
PDB entry 3idw: Crystal structure of Sla1 homology domain 2
Classification: ENDOCYTOSIS
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-07-21
Authors: Di Pietro, S.M., Cascio, D., Bowie, J.U., Payne, G.S.
PDB entry 3idx: Crystal structure of HIV-gp120 core in complex with CD4-binding site antibody b13, space group C222
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-22
Authors: Chen, L., Kwon, Y.D., Zhou, T., Wu, X., O'Dell, S., Cavacini, L., Hessell, A.J., Pancera, M., Tang, M., Xu, L., Yang, Z.Y., Zhang, M.Y., Arthos, J., Burton, D.R., Dimitrov, D.S., Nabel, G.J., Posner, M., Sodroski, J., Wyatt, R., Mascola, J.R., Kwong, P.D.
PDB entry 3idy: Crystal structure of HIV-gp120 core in complex with CD4-binding site antibody b13, space group C2221
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-07-22
Authors: Chen, L., Kwon, Y.D., Zhou, T., Wu, X., O'Dell, S., Cavacini, L., Hessell, A.J., Pancera, M., Tang, M., Xu, L., Yang, Z.Y., Zhang, M.Y., Arthos, J., Burton, D.R., Dimitrov, D.S., Nabel, G.J., Posner, M., Sodroski, J., Wyatt, R., Mascola, J.R., Kwong, P.D.
PDB entry 3idz: Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-22
Authors: Ishikawa, H., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 3ie0: Crystal Structure of S378Y mutant TTHA0252 from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2009-07-22
Authors: Ishikawa, H., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 3ie1: Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNA
Classification: HYDROLASE/RNA
Source organism: Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2009-07-22
Authors: Ishikawa, H., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 3ie2: Crystal Structure of H400V mutant TTHA0252 from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-22
Authors: Ishikawa, H., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 3ie3: Structural basis for the binding of the anti-cancer compound 6-(7-Nitro-2,1,3-benzoxadiazol-4-ylthio)hexanol (NBDHEX) to human glutathione S-transferases
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-22
Authors: Federici, L., Lo Sterzo, C., Di Matteo, A., Scaloni, F., Federici, G., Caccuri, A.M.
PDB entry 3ie4: b-glucan binding domain of Drosophila GNBP3 defines a novel family of pattern recognition receptor
Classification: IMMUNE SYSTEM
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2009-07-22
Authors: Mishima, Y., Coste, F., Kellenberger, C., Roussel, A.
PDB entry 3ie5: Crystal structure of Hyp-1 protein from Hypericum perforatum (St John's wort) involved in hypericin biosynthesis
Classification: Plant Protein, BIOSYNTHETIC PROTEIN
Source organism: Hypericum perforatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.688 Å
Deposited: 2009-07-22
Authors: Michalska, K., Fernandes, H., Sikorski, M.M., Jaskolski, M.
PDB entry 3ie7: The crystal structure of phosphofructokinase (lin2199) from Listeria innocua in complex with ATP at 1.6A
Classification: TRANSFERASE
Source organism: Listeria innocua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-07-22
Authors: Satyanarayana, L., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ie9: Structure of oxidized M98L mutant of amicyanin
Classification: ELECTRON TRANSPORT
Source organism: Paracoccus denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-22
Authors: Sukumar, N., Davidson, V.L.
PDB entry 3iea: Structure of reduced M98L mutant of amicyanin
Classification: ELECTRON TRANSPORT
Source organism: Paracoccus denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-22
Authors: Sukumar, N., Davidson, V.L.
PDB entry 3ieb: Crystal structure of 3-keto-L-gulonate-6-phosphate decarboxylase from Vibrio cholerae O1 biovar El Tor str. N16961
Classification: BIOSYNTHETIC PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-22
Authors: Nocek, B., Maltseva, N., Osipiuk, J., Stam, J., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3iec: Helicobacter pylori CagA Inhibits PAR1/MARK Family Kinases by Mimicking Host Substrates
Classification: SIGNALING PROTEIN/TOXIN
Source organism: Helicobacter pylori; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-22
Authors: Stebbins, C.E., Nesic, D., Miller, M.
PDB entry 3ied: Crystal structure of N-terminal domain of Plasmodium falciparum Hsp90 (PF14_0417) in complex with AMPPN
Classification: CHAPERONE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2009-07-22
Authors: Pizarro, J.C., Wernimont, A.K., Lew, J., Hutchinson, A., Artz, J.D., Amaya, M.F., Plotnikova, O., Vedadi, M., Kozieradzki, I., Weigelt, J., Edwards, A.M., Arrowsmith, C.H., Bountra, C., Botchkarev, A., Hui, R., Hills, T., Structural Genomics Consortium (SGC)
PDB entry 3iee: Crystal structure of an alpha helical protein (BF3319) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacteroides fragilis NCTC 9343
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-22
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ief: Crystal structure of tRNA guanine-n1-methyltransferase from Bartonella henselae using MPCS.
Classification: TRANSFERASE, RNA BINDING PROTEIN
Source organism: Bartonella henselae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-22
Authors: Edwards, T.E., Stahl, G., Gerdts, C.J., Staker, B.L., Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3ieg: Crystal Structure of P58(IPK) TPR Domain at 2.5 A
Classification: CHAPERONE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2009-07-22
Authors: Tao, J., Sha, B.
PDB entry 3ieh: Crystal structure of Putative metallopeptidase (YP_001051774.1) from SHEWANELLA BALTICA OS155 at 2.45 A resolution
Classification: HYDROLASE
Source organism: Shewanella baltica OS155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2009-07-22
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3iei: Crystal structure of human leucine carboxylmethyltransferase-1 in complex with S-adenosyl homocysteine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-22
Authors: Xing, Y., Jeffry, P.D.
PDB entry 3iej: Pyrazole-based Cathepsin S Inhibitors with Arylalkynes as P1 Binding Elements
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2009-07-22
Authors: Bembenek, S.
PDB entry 3iek: Crystal Structure of native TTHA0252 from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-07-22
Authors: Ishikawa, H., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R.
PDB entry 3iel: Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with UMP
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-07-23
Authors: Ishikawa, H., Nakagawa, N., Kuramitsu, S., Yokoyama, S., Masui, R.
PDB entry 3iem: Crystal Structure of TTHA0252 from Thermus thermophilus HB8 complexed with RNA analog
Classification: HYDROLASE/RNA
Source organism: Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-23
Authors: Ishikawa, H., Nakagawa, N., Kuramitus, S., Yokoyama, S., Masui, R.
PDB entry 3ieo: The coumarin-binding site in carbonic anhydrase: the antiepileptic lacosamide as an example
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-23
Authors: Temperini, C., Innocenti, A., Scozzafava, A., Parkkila, S., Supuran, C.T.
PDB entry 3iep: Firefly luciferase apo structure (P41 form)
Classification: OXIDOREDUCTASE
Source organism: Photinus pyralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-23
Authors: Lovell, S., Battaile, K.P., Auld, D.S., Thorne, N., Lea, W.A., Maloney, D.J., Shen, M., Raj, G., Thomas, C.J., Simeonov, A., Hanzlik, R.P., Inglese, J.
PDB entry 3ieq: Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei with cytidine
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-23
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3ier: Firefly luciferase apo structure (P41 form) with PEG 400 bound
Classification: OXIDOREDUCTASE
Source organism: Photinus pyralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-07-23
Authors: Lovell, S., Battaile, K.P., Auld, D.S., Thorne, N., Lea, W.A., Maloney, D.J., Shen, M., Raj, G., Thomas, C.J., Simeonov, A., Hanzlik, R.P., Inglese, J.
PDB entry 3ies: Firefly luciferase inhibitor complex
Classification: OXIDOREDUCTASE
Source organism: Photinus pyralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-23
Authors: Lovell, S., Battaile, K.P., Auld, D.S., Thorne, N., Lea, W.A., Maloney, D.J., Shen, M., Raj, G., Thomas, C.J., Simeonov, A., Hanzlik, R.P., Inglese, J.
PDB entry 3iet: Crystal Structure of 237mAb with antigen
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-23
Authors: Brooks, C.L., Evans, S.V., Borisova, S.N.
PDB entry 3ieu: Crystal Structure of ERA in Complex with GDP
Classification: Nucleotide binding protein
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-23
Authors: Tu, C., Ji, X.
PDB entry 3iev: Crystal Structure of ERA in Complex with MgGNP and the 3' End of 16S rRNA
Classification: Nucleotide binding protein/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-23
Authors: Tu, C., Ji, X.
PDB entry 3iew: Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei with bound CTP and CDP
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-23
Authors: Staker, B.L., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3iex: Schistosoma Purine nucleoside phosphorylase in complex with guanosine
Classification: TRANSFERASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-07-23
Authors: Castilho, M.S., Pereira, H.M., Oliva, G., Andricopulo, A.D.
PDB entry 3iey: Crystal Structure of the functional Nanoarchaeum equitans tRNA splicing endonuclease
Classification: Hydrolase/RNA binding protein
Source organism: Nanoarchaeum equitans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2009-07-23
Authors: Mitchell, M., Li, H.
PDB entry 3iez: Crystal structure of the RasGAP C-terminal (RGC) domain of IQGAP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-07-23
Authors: Nedyalkova, L., Tempel, W., Tong, Y., Zhong, N., Crombet, L., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3if0: Crystal Structure of the Nanoarchaeum equitans tRNA splicing endonuclease structural subunit
Classification: HYDROLASE
Source organism: Nanoarchaeum equitans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-23
Authors: Mitchell, M., Li, H.
PDB entry 3if1: Crystal structure of 237mAb in complex with a GalNAc
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2009-07-23
Authors: Brooks, C.L., Evans, S.V., Borisova, S.N.
PDB entry 3if2: Crystal structure of Putative amino-acid aminotransferase (YP_265399.1) from Psychrobacter arcticum 273-4 at 2.50 A resolution
Classification: TRANSFERASE
Source organism: Psychrobacter arcticus 273-4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-23
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3if4: Structure from the mobile metagenome of North West Arm Sewage Outfall: Integron Cassette Protein Hfx_Cass5
Classification: structural genomics, unknown function
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 2.181 Å
Deposited: 2009-07-24
Authors: Sureshan, V., Deshpande, C.N., Harrop, S.J., Evdokimova, E., Kudrytska, M., Koenig, J.E., Osipiuk, J., Edwards, A., Savchenko, A., Joachimiak, A., Doolittle, W.F., Stokes, H.W., Curmi, P.M.G., Mabbutt, B.C., Midwest Center for Structural Genomics (MCSG)
PDB entry 3if5: Crystal Structure Analysis of Mglu
Classification: HYDROLASE
Source organism: Micrococcus luteus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2009-07-24
Authors: Yoshimune, K., Shirakihara, Y.
PDB entry 3if6: Crystal structure of OXA-46 beta-lactamase from P. aeruginosa
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-24
Authors: Docquier, J.D., Benvenuti, M., Calderone, V., Giuliani, F., Kapetis, D., De Luca, F., Rossolini, G.M., Mangani, S.
PDB entry 3if7: Structure of Calmodulin complexed with its first endogenous inhibitor, sphingosylphosphorylcholine
Classification: CALCIUM BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-07-24
Authors: Kovacs, E., Harmat, V., Toth, J., Vertessy, B.G., Modos, K., Kardos, J., Liliom, K.
PDB entry 3if8: Crystal Structure of ZWILCH, a member of the RZZ kinetochore complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2009-07-24
Authors: Wehenkel, A., Civril, F., Musacchio, A.
PDB entry 3if9: Crystal structure of Glycine Oxidase G51S/A54R/H244A mutant in complex with inhibitor glycolate
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-24
Authors: Pedotti, M., Rosini, E., Molla, G., Moschetti, T., Vallone, B., Savino, C., Pollegioni, L.
PDB entry 3ifa: Human muscle fructose-1,6-bisphosphatase E69Q mutant in complex with AMP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2009-07-24
Authors: Kolodziejczyk, R., Zarzycki, M., Jaskolski, M., Dzugaj, A.
PDB entry 3ifb: NMR STUDY OF HUMAN INTESTINAL FATTY ACID BINDING PROTEIN
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 1998-10-16
Authors: Zhang, F., Luecke, C., Baier, L.J., Sacchettini, J.C., Hamilton, J.A.
PDB entry 3ifc: Human muscle fructose-1,6-bisphosphatase E69Q mutant in complex with AMP and alpha fructose-6-phosphate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2009-07-24
Authors: Kolodziejczyk, R., Zarzycki, M., Jaskolski, M., Dzugaj, A.
PDB entry 3ifd: Human synthetic monocyte chemoattractant protein 1 (MCP-1)
Classification: CYTOKINE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-24
Authors: Teplyakov, A., Obmolova, G., Gilliland, G.L.
PDB entry 3ife: 1.55 Angstrom Resolution Crystal Structure of Peptidase T (pepT-1) from Bacillus anthracis str. 'Ames Ancestor'.
Classification: HYDROLASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-07-24
Authors: Minasov, G., Halavaty, A., Shuvalova, L., Dubrovska, I., Winsor, J., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3iff: 2'-SeMe-A modified DNA decamer
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-07-24
Authors: Sheng, J., Gan, J., Salon, J., Huang, Z.
PDB entry 3ifi: 2'-SeMe-dG modified octamer DNA
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2009-07-24
Authors: Sheng, J., Gan, J., Salon, J., Huang, Z.
PDB entry 3ifj: Crystal structure of Mtu recA intein, splicing domain
Classification: SPLICING
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-24
Authors: Van Roey, P., Belfort, M.
PDB entry 3ifk: Crystal Structure Of Calcium-Saturated Calmodulin N-terminal Domain Fragment, Residues 1-90
Classification: METAL BINDING PROTEIN
Source organism: RATTUS NORVEGICUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2009-07-24
Authors: Witt, T.J., Newman, R.A., Shea, M.A.
PDB entry 3ifl: X-ray structure of amyloid beta peptide:antibody (Abeta1-7:12A11) complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-07-24
Authors: Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D.
PDB entry 3ifm: PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA
Classification: VIRUS
Source organism: Pseudomonas phage Pf1
Experimental method: FIBER DIFFRACTION
Resolution: 3.3 Å
Deposited: 1994-01-16
Authors: Marvin, D.A.
PDB entry 3ifn: X-ray structure of amyloid beta peptide:antibody (Abeta1-40:12A11) complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-07-24
Authors: Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D.
PDB entry 3ifo: X-ray structure of amyloid beta peptide:antibody (Abeta1-7:10D5) complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-07-24
Authors: Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D.
PDB entry 3ifp: X-ray structure of amyloid beta peptide:antibody (Abeta1-7:12B4) complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2009-07-24
Authors: Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D.
PDB entry 3ifq: Interction of plakoglobin and beta-catenin with desmosomal cadherins
Classification: CELL ADHESION
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-24
Authors: Choi, H.-J., Gross, J.C., Pokutta, S., Weis, W.I.
PDB entry 3ifr: The crystal structure of xylulose kinase from Rhodospirillum rubrum
Classification: TRANSFERASE
Source organism: Rhodospirillum rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-24
Authors: Zhang, Z., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ifs: 2.0 Angstrom Resolution Crystal Structure of Glucose-6-phosphate Isomerase (pgi) from Bacillus anthracis.
Classification: ISOMERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.004 Å
Deposited: 2009-07-24
Authors: Minasov, G., Wawrzak, Z., Onopriyenko, O., Gordon, E., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3ift: Crystal structure of glycine cleavage system protein H from Mycobacterium tuberculosis, using X-rays from the Compact Light Source.
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-25
Authors: Edwards, T.E., Abendroth, J., Staker, B., Mayer, C., Phan, I., Kelley, A., Analau, E., Leibly, D., Rifkin, J., Loewen, R., Ruth, R.D., Stewart, L.J., Accelerated Technologies Center for Gene to 3D Structure (ATCG3D)
PDB entry 3ifu: The Crystal Structure of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) Leader Protease Nsp1
Classification: TRANSCRIPTION
Source organism: Porcine reproductive and respiratory syndrome virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2009-07-26
Authors: Sun, Y., Xue, F., Guo, Y., Ma, M., Lou, Z., Rao, Z.
PDB entry 3ifv: Crystal structure of the Haloferax volcanii proliferating cell nuclear antigen
Classification: REPLICATION
Source organism: Haloferax volcanii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-26
Authors: Winter, J.A., Christofi, P., Morroll, S., Bunting, K.A.
PDB entry 3ifw: Crystal structure of the S18Y variant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin vinylmethylester.
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-26
Authors: Das, C., Boudreaux, D., Maiti, T.
PDB entry 3ifx: Crystal structure of the Spin-labeled KcsA mutant V48R1
Classification: MEMBRANE PROTEIN
Source organism: Streptomyces lividans
Experimental method: X-RAY DIFFRACTION, EPR
Resolution: 3.56 Å
Deposited: 2009-07-26
Authors: Cieslak, J.A., Focia, P.J., Gross, A.
PDB entry 3ifz: crystal structure of the first part of the Mycobacterium tuberculosis DNA gyrase reaction core: the breakage and reunion domain at 2.7 A resolution
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-07-27
Authors: Piton, J., Aubry, A., Delarue, M., Mayer, C.
PDB entry 3ig0: crystal structure of the second part of the Mycobacterium tuberculosis DNA gyrase reaction core: the TOPRIM domain at 2.1 A resolution
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-27
Authors: Piton, J., Aubry, A., Delarue, M., Mayer, C.
PDB entry 3ig1: HIV-1 Reverse Transcriptase with the Inhibitor beta-Thujaplicinol Bound at the RNase H Active Site
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus type 1 BH10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-27
Authors: Himmel, D.M., Maegley, K.A., Pauly, T.A., Arnold, E.
PDB entry 3ig2: The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A
Classification: LIGASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2009-07-27
Authors: Stein, A.J., Sather, A., Hendricks, R., Keigher, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ig3: Crystal structure of mouse Plexin A3 intracellular domain
Classification: SIGNALING PROTEIN, MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2009-07-27
Authors: He, H., Zhang, X.
PDB entry 3ig4: Structure of a putative aminopeptidase P from Bacillus anthracis
Classification: HYDROLASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2009-07-27
Authors: Anderson, S.M., Wawrzak, Z., Skarina, T., Onopriyenko, O., Kwon, K., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3ig5: Saccharomyces cerevisiae glutamate cysteine ligase in complex with Mg2+ and L-glutamate
Classification: LIGASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-27
Authors: Biterova, E., Barycki, J.J.
PDB entry 3ig6: Low molecular weigth human Urokinase type Plasminogen activator 2-[6-(3'-Aminomethyl-biphenyl-3-yloxy)-4-(3-dimethylamino-pyrrolidin-1-yl)-3,5-difluoro-pyridin-2-yloxy]-4-dimethylamino-benzoic acid complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2009-07-27
Authors: Adler, M., Whitlow, M.
PDB entry 3ig7: Novel CDK-5 inhibitors - crystal structure of inhibitor EFP with CDK-2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-27
Authors: Pandit, J.
PDB entry 3ig8: Saccharomyces cerevisiae glutamate cysteine ligase in complex with Mg2+, L-glutamate and ADP
Classification: LIGASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2009-07-27
Authors: Biterova, E., Barycki, J.J.
PDB entry 3ig9: Small outer capsid protein (SOC) of bacteriophage RB69
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage RB69
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-27
Authors: Li, Q., Fokine, A., O'Donnell, E., Rao, V.B., Rossmann, M.G.
PDB entry 3iga: Potassium Channel KcsA-Fab complex in Li+ and K+
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2009-07-27
Authors: Thompson, A.N., Ilsoo, K., Panosian, T.D., Iverson, T.M., Allen, T.W., Nimigean, C.M.
PDB entry 3igb: Bace-1 with Compound 3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.238 Å
Deposited: 2009-07-27
Authors: Olland, A.M.
PDB entry 3igc: Smallpox virus topoisomerase-DNA transition state
Classification: Isomerase/DNA
Source organism: Variola virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-27
Authors: Perry, K., Hwang, Y., Bushman, F.D., Van Duyne, G.D.
PDB entry 3igd: Crystal structure of Mtu recA intein, splicing domain
Classification: SPLICING
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-27
Authors: Van Roey, P., Belfort, M.
PDB entry 3ige: Small outer capsid protein (Soc) from bacteriophage RB69
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage RB69
Experimental method: X-RAY DIFFRACTION
Resolution: 2.254 Å
Deposited: 2009-07-27
Authors: Li, Q., Fokine, A., O'Donnell, E., Rao, V.B., Rossmann, M.G.
PDB entry 3igf: Crystal Structure of the All4481 protein from Nostoc sp. PCC 7120, Northeast Structural Genomics Consortium Target NsR300
Classification: ATP binding protein
Source organism: Nostoc sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-27
Authors: Forouhar, F., Abashidze, M., Seetharaman, J., Mao, M., Xiao, R., Ciccosanti, C., Maglaqui, M., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3igg: Novel CDK-5 inhibitors - crystal structure of inhibitor EFQ with CDK-2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-27
Authors: Pandit, J.
PDB entry 3igh: Crystal structure of an uncharacterized metal-dependent hydrolase from pyrococcus horikoshii ot3
Classification: HYDROLASE
Source organism: PYROCOCCUS HORIKOSHII
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-07-27
Authors: Patskovsky, Y., Toro, R., Freeman, J., Miller, S., Sauder, J.M., Raushel, F.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3igi: Tertiary Architecture of the Oceanobacillus Iheyensis Group II Intron
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.125 Å
Deposited: 2009-07-27
Authors: Toor, N., Keating, K.S., Fedorova, O., Rajashankar, K., Wang, J., Pyle, A.M.
PDB entry 3igj: Crystal Structure of Maltose O-acetyltransferase Complexed with Acetyl Coenzyme A from Bacillus anthracis
Classification: TRANSFERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-27
Authors: Maltseva, N., Kim, Y., Papazisi, L., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3igk: Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs (p53-DNA complex 2)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-28
Authors: Suad, O., Rabinovich, D., Rozenberg, H., Shakked, Z.
PDB entry 3igl: Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs (p53-DNA complex 1)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-28
Authors: Kitayner, M., Suad, O., Rozenberg, H., Shakked, Z.
PDB entry 3igm: A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA
Classification: Transcription/DNA
Source organism: Plasmodium falciparum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-28
Authors: Lindner, S.E., De Silva, E., Keck, J.L., Llinas, M.
PDB entry 3ign: Crystal Structure of the GGDEF domain from Marinobacter aquaeolei diguanylate cyclase complexed with c-di-GMP - Northeast Structural Genomics Consortium Target MqR89a
Classification: TRANSFERASE
Source organism: Marinobacter aquaeolei VT8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2009-07-28
Authors: Vorobiev, S., Neely, H., Seetharaman, J., Wang, H., Foote, E.L., Ciccosanti, C., Sahdev, S., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3igo: Crystal structure of Cryptosporidium parvum CDPK1, cgd3_920
Classification: TRANSFERASE
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-07-28
Authors: Wernimont, A.K., Artz, J.D., Finnerty, P., Amani, M., Allali-Hassanali, A., Vedadi, M., Tempel, W., MacKenzie, F., Edwards, A.M., Arrowsmith, C.H., Bountra, C., Weigelt, J., Bochkarev, A., Hui, R., Lin, Y.H., Structural Genomics Consortium (SGC)
PDB entry 3igp: Structure of inhibitor binding to Carbonic Anhydrase II
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-07-28
Authors: Gitto, R., Agnello, S., Brynda, J., Mader, P., Supuran, C.T., Chimirri, A.
PDB entry 3igq: Crystal structure of the extracellular domain of a bacterial pentameric ligand-gated ion channel
Classification: MEMBRANE PROTEIN, TRANSPORT PROTEIN
Source organism: Gloeobacter violaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-28
Authors: Nury, H., Delarue, M.
PDB entry 3igr: The Crystal Structure of Ribosomal-protein-S5-alanine Acetyltransferase from Vibrio fischeri to 2.0A
Classification: TRANSFERASE
Source organism: Vibrio fischeri
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-28
Authors: Stein, A.J., Sather, A., Shackelford, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3igs: Structure of the Salmonella enterica N-acetylmannosamine-6-phosphate 2-epimerase
Classification: ISOMERASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-07-28
Authors: Anderson, S.M., Wawrzak, Z., Gordon, E., Skarina, T., Papazisi, L., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3igt: A rare nucleotide base tautomer in the structure of an asymmetric DNA junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-28
Authors: Khuu, P., Ho, P.S.
PDB entry 3igu: Crystal structure of human alpha-N-acetylgalactosaminidase, covalent intermediate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-07-28
Authors: Clark, N.E., Garman, S.C.
PDB entry 3igv: Crystal structure of HCV NS5B polymerase with a novel monocyclic dihydro-pyridinone inhibitor
Classification: TRANSFERASE
Source organism: Hepatitis C virus (isolate BK)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-28
Authors: Zhao, Q., Showalter, R.E., Han, Q., Kissinger, C.R.
PDB entry 3igx: 1.85 Angstrom Resolution Crystal Structure of Transaldolase B (talA) from Francisella tularensis.
Classification: TRANSFERASE
Source organism: Francisella tularensis subsp. tularensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-07-29
Authors: Minasov, G., Wawrzak, Z., Skarina, T., Gordon, E., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3igy: Crystal structures of Leishmania mexicana phosphoglycerate mutase at high cobalt concentrations
Classification: ISOMERASE
Source organism: Leishmania mexicana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.003 Å
Deposited: 2009-07-29
Authors: Nowicki, M.W., Kuaprasert, B., McNae, I.W., Morgan, H.P., Harding, M.M., Michels, P.A., Fothergill-Gilmore, L.A., Walkinshaw, M.D.
PDB entry 3igz: Crystal structures of Leishmania mexicana phosphoglycerate mutase at low cobalt concentration
Classification: ISOMERASE
Source organism: Leishmania mexicana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-29
Authors: Nowicki, M.W., Kuaprasert, B., McNae, I.W., Morgan, H.P., Harding, M.M., Michels, P.A., Fothergill-Gilmore, L.A., Walkinshaw, M.D.
PDB entry 3ih0: Crystal structure of an uncharacterized sugar kinase PH1459 from Pyrococcus horikoshii in complex with AMP-PNP
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-29
Authors: Kumar, G., Eswaramoorthy, S., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ih2: TM1030 crystallized at 323K
Classification: transcription regulator
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-29
Authors: Koclega, K.D., Chruszcz, M., Bujacz, G., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ih3: TM1030 crystallized at 310K
Classification: transcription regulator
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-07-29
Authors: Koclega, K.D., Chruszcz, M., Bujacz, G., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ih4: TM1030 crystallized at 277K
Classification: transcription regulator
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-29
Authors: Koclega, K.D., Chruszcz, M., Bujacz, G., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ih5: Crystal Structure of Electron Transfer Flavoprotein alpha-subunit from Bacteroides thetaiotaomicron
Classification: ELECTRON TRANSPORT
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-29
Authors: Kim, Y., Sather, A., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ih6: Crystal structure of putative zinc protease from Bordetella pertussis Tohama I
Classification: HYDROLASE
Source organism: Bordetella pertussis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-07-29
Authors: Chang, C., Chhor, G., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ih7: Crystal structure of catalytically active human 8-oxoguanine glycosylase distally crosslinked to guanine-containing DNA
Classification: (HYDROLASE,LYASE)/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-07-29
Authors: Verdine, G.L., Crenshaw, C.M., Oo, K.S., Kutchukian, P.S.
PDB entry 3ih8: Crystal Structure Analysis of Mglu in its native form
Classification: HYDROLASE
Source organism: Micrococcus luteus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-29
Authors: Yoshimune, K., Shirakihara, Y.