LiteFold/PDB huggingface dataset:
PDB entry 8ela: CTX-M-14 beta-lactamase mutant - N132A w MES
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-09-23
Authors: Lu, S., Palzkill, T., Hu, L., Prasad, B.V.V.
PDB entry 8elb: CTX-M-14 beta-lactamase mutant- N132A
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-09-23
Authors: Lu, S., Neetu, N., Palzkill, T.
PDB entry 8elc: Human JNK2 bound to covalent inhibitor YL2056
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.072 Å
Deposited: 2022-09-23
Authors: Li, L., Gurbani, D., Westover, K.D.
PDB entry 8eld: Bacteriophage HRP29 Icosohedral Reconstruction
Classification: VIRUS
Source organism: Shigella phage Buco
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-09-23
Authors: Subramanian, S., Bergland Drarvik, S.M., Parent, K.N.
PDB entry 8ele: Co-crystal structure of Chaetomium glucosidase with compound 16
Classification: HYDROLASE/INHIBITOR
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-09-23
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8elf: Structure of Get3d, a homolog of Get3, from Arabidopsis thaliana
Classification: CHAPERONE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-09-23
Authors: Manu, M.S., Barlow, A.N., Clemons Jr., W.M., Ramasamy, S.
PDB entry 8elg: Crystal Structure of HLA-B*15:01 in complex with spike derived peptide NQKLIANAF from OC43 virus
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-09-24
Authors: Murdolo, L.D., Gras, S.
PDB entry 8elh: Crystal Structure of HLA-B*15:01 in complex with spike derived peptide NQKLIANQF from SARS-CoV-2 virus
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-09-24
Authors: Murdolo, L.D., Gras, S.
PDB entry 8eli: Broadly neutralizing antibody VRC34-combo.1 in complex with HIV fusion peptide (residue 512-519)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-09-24
Authors: Xu, K., Kwong, P.D.
PDB entry 8elj: SARS-CoV-2 spike glycoprotein in complex with the ICO-hu23 neutralizing antibody Fab fragment
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-09-24
Authors: Yee, A.W., Morizumi, T., Kim, K., Kuo, A., Ernst, O.P.
PDB entry 8elk: HRAS R97F Crystal Form 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-09-26
Authors: Johnson, C.W., Mattos, C.
PDB entry 8ell: Apo human biliverdin reductase beta (cryogenic)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2022-09-26
Authors: McLeod, M.J., Eisenmesser, E.Z., Lee, E., Thorne, R.E.
PDB entry 8elm: Apo human biliverdin reductase beta (293K)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-09-26
Authors: McLeod, M.J., Eisenmesser, E.Z., Lee, E., Thorne, R.E.
PDB entry 8eln: Crystal Structure of Nanobody VHH222 Bound to Its Antigen PA14 Cif
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas aeruginosa PA14; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-09-26
Authors: Simard, A.R., Madden, D.R.
PDB entry 8elo: Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-225
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2022-09-26
Authors: Liu, H., Wilson, I.A.
PDB entry 8elp: Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-240
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2022-09-26
Authors: Liu, H., Wilson, I.A.
PDB entry 8elq: Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with antibody CC12.1 Fab and nanobody Nb-C4-255
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2022-09-26
Authors: Liu, H., Wilson, I.A.
PDB entry 8elr: HRAS R97F Crystal Form 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-09-26
Authors: Johnson, C.W., Mattos, C.
PDB entry 8els: HRAS R97A Crystal Form 1 R-state
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.267 Å
Deposited: 2022-09-26
Authors: Davis, D., Johnson, C.W., Mattos, C.
PDB entry 8elt: HRAS R97G Crystal Form 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2022-09-26
Authors: Johnson, C.W., Mattos, C.
PDB entry 8elu: HRAS R97G Crystal form 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2022-09-26
Authors: Johnson, C.W., Rodrigues, J.A., Mattos, C.
PDB entry 8elv: HRAS R97I Crystal Form 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.153 Å
Deposited: 2022-09-26
Authors: Johnson, C.W., Mattos, C.
PDB entry 8elw: HRAS R97A Crystal Form 1 T-State
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.699 Å
Deposited: 2022-09-26
Authors: Davis, K., Johnson, C.W., Mattos, C.
PDB entry 8elx: HRAS R97I Crystal Form 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.975 Å
Deposited: 2022-09-26
Authors: Johnson, C.W., Mattos, C.
PDB entry 8ely: HRAS R97M Crystal Form 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-09-26
Authors: Johnson, C.W., Mattos, C.
PDB entry 8elz: HRAS R97M Crystal Form 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.961 Å
Deposited: 2022-09-26
Authors: Johnson, C.W., Mattos, C.
PDB entry 8em0: HRAS R97V Crystal Form 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.109 Å
Deposited: 2022-09-26
Authors: Johnson, C.W., Mattos, C.
PDB entry 8em1: Type IIS Restriction Endonuclease PaqCI, DNA Unbound
Classification: DNA BINDING PROTEIN
Source organism: Paucibacter aquatile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-09-26
Authors: Kennedy, M.A., Stoddard, B.L.
PDB entry 8em2: Cryo-EM structure of the human GDH/6PGL endoplasmic bifunctional protein
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2022-09-26
Authors: Su, C.C.
PDB entry 8em3: Carbonic Anhydrase II in complex with the diaryl urea molecule J2
Classification: METAL BINDING PROTEIN, Lyase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2022-09-26
Authors: Combs, J., McKenna, R.
PDB entry 8em4: Cryo-EM structure of LRP2 at pH 7.5
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2022-09-26
Authors: Beenken, A., Cerutti, G., Brasch, J., Fitzpatrick, A.W., Barasch, J., Shapiro, L.
PDB entry 8em5: Mycobacterium thermoresistible MmpS5
Classification: PROTEIN BINDING
Source organism: Mycolicibacterium thermoresistibile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-09-26
Authors: Cuthbert, B.J., Goulding, C.W.
PDB entry 8em6: Bacteriophage HRP29 Procapsid Icosohedral Reconstruction
Classification: VIRUS
Source organism: Shigella phage Buco
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-09-26
Authors: Subramanian, S., Bergland Drarvik, S.M., Parent, K.N.
PDB entry 8em7: Cryo-EM structure of LRP2 at pH 5.2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2022-09-27
Authors: Beenken, A., Cerutti, G., Fitzpatrick, A.W., Barasch, J., Shapiro, L.
PDB entry 8em8: Co-crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium falciparum in complex with RY-1-165
Classification: TRANSFERASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2022-09-27
Authors: Hutchinson, A., Dong, A., Seitova, A., Bhanot, P., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 8em9: Human PU.1 ETS-Domain (165-270) Bound to d(AATAGGAGAAGTAGGG)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.341 Å
Deposited: 2022-09-27
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 8ema: mouse full length B cell receptor
Classification: IMMUNE SYSTEM
Source organism: Aliivibrio fischeri; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.2 Å
Deposited: 2022-09-27
Authors: Ying, D., Xiong, P., Michael, R.
PDB entry 8emb: X-ray crystal structure of Thermosynechococcus elongatus Si3 domain of RNA polymerase RpoC2 subunit
Classification: TRANSCRIPTION
Source organism: Thermosynechococcus vestitus BP-1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2022-09-27
Authors: Murakami, K.S., Imashimizu, M., Qayyum, M.Z., Vishwakarma, R.K., Yuzenkova, Y.
PDB entry 8emc: CryoEM characterization of BrxL -- a unique AAA+ phage restriction Factor.
Classification: ANTIMICROBIAL PROTEIN
Source organism: Acinetobacter sp. NEB 394
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-09-27
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 8emd: Human PU.1 ETS-Domain (165-270) Q226E Mutant Bound to d(AATAAGCGGAAGTGGG)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-09-27
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 8eme: EGFR(T790M/V948R) in complex with ZNL-0056
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2022-09-27
Authors: Beyett, T.S., Eck, M.J.
PDB entry 8emf: Crystal structure of a HLA-B*35:01-NP6 epitope from 1977 H1N1 influenza strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.80482 Å
Deposited: 2022-09-27
Authors: Littler, D.R., Rossjohn, J.
PDB entry 8emg: Crystal structure of a HLA-B*35:01-NP7 epitope from 2002 H2N1 influenza strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83001 Å
Deposited: 2022-09-27
Authors: Littler, D.R., Rossjohn, J.
PDB entry 8emh: CryoEM characterization of a unique AAA+ BrxL phage restriction factor
Classification: ANTIMICROBIAL PROTEIN
Source organism: Acinetobacter sp. NEB 394; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2022-09-27
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 8emi: Crystal structure of a HLA-B*35:01-NP8 epitope from 2005 H1N1 influenza strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57302 Å
Deposited: 2022-09-27
Authors: Littler, D.R., Rossjohn, J.
PDB entry 8emj: Crystal structure of HLA-B*35:01-NP9 epitope from 2006 H1N1 influenza strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75003 Å
Deposited: 2022-09-27
Authors: Littler, D.R., Rossjohn, J.
PDB entry 8emk: Crystal structure of HLA-B*35:01-NP3 epitope from 1957 H2N2 influenza strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66523 Å
Deposited: 2022-09-27
Authors: Littler, D.R., Rossjohn, J.
PDB entry 8eml: Crystal Structure of Gsx2 Homeodomain in Complex with DNA
Classification: TRANSCRIPTION/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2022-09-28
Authors: Webb, J.A., Kovall, R.A.
PDB entry 8emm: Composite 70S ribosome structure for ""Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2022-09-28
Authors: Watson, Z.L., Cate, J.H.D.
PDB entry 8emq: Mouse apoferritin heavy chain with zinc determined using single-particle cryo-EM with Apollo camera.
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.66 Å
Deposited: 2022-09-28
Authors: Peng, R., Fu, X., Mendez, J.H., Randolph, P.H., Bammes, B., Stagg, S.M.
PDB entry 8emr: Cryo-EM structure of human liver glucosidase II
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2022-09-28
Authors: Su, C., Lyu, M., Zhang, Z., Yu, E.W.
PDB entry 8ems: Cryo-EM structure of human liver glycogen phosphorylase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2022-09-28
Authors: Su, C., Lyu, M., Zhang, Z., Yu, E.W.
PDB entry 8emt: Cryo-EM analysis of the human aldehyde oxidase from liver
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2022-09-28
Authors: Su, C., Lyu, M., Zhang, Z., Yu, E.W.
PDB entry 8emu: Human Carbonic Anhydrase II Heterobifunctional Degraders
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2022-09-28
Authors: Kohlbrand, A.J., O'Herin, C.B.
PDB entry 8emv: Phospholipase C beta 3 (PLCb3) in solution
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-09-28
Authors: Falzone, M.E., MacKinnon, R.
PDB entry 8emw: Phospholipase C beta 3 (PLCb3) in complex with Gbg on liposomes
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-09-28
Authors: Falzone, M.E., MacKinnon, R.
PDB entry 8emx: Phospholipase C beta 3 (PLCb3) in complex with Gbg on lipid nanodiscs
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-09-28
Authors: Falzone, M.E., MacKinnon, R.
PDB entry 8emy: Structure of GII.4 norovirus in complex with Nanobody 82
Classification: VIRAL PROTEIN
Source organism: Norovirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-09-28
Authors: Kher, G., Sabin, C., Pancera, M., Koromyslova, A., Hansman, G.
PDB entry 8emz: Structure of GII.17 norovirus in complex with Nanobody 2
Classification: VIRAL PROTEIN
Source organism: Norovirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-09-28
Authors: Kher, G., Sabin, C., Pancera, M., Koromyslova, A., Hansman, G.
PDB entry 8en0: Structure of GII.17 norovirus in complex with Nanobody 7
Classification: VIRAL PROTEIN
Source organism: Norovirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2022-09-28
Authors: Kher, G., Sabin, C., Koromyslova, A., Pancera, M., Hansman, G.
PDB entry 8en1: Structure of GII.4 norovirus in complex with Nanobody 30
Classification: VIRAL PROTEIN
Source organism: Norovirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-09-28
Authors: Kher, G., Sabin, C., Pancera, M., Koromyslova, A., Hansman, G.
PDB entry 8en2: Structure of GII.10 norovirus in complex with Nanobody 34
Classification: VIRAL PROTEIN
Source organism: Norovirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-09-28
Authors: Kher, G., Sabin, C., Koromyslova, A., Pancera, M., Hansman, G.
PDB entry 8en3: Structure of GII.17 norovirus in complex with Nanobody 45
Classification: VIRAL PROTEIN
Source organism: Norovirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-09-28
Authors: Kher, G., Sabin, C., Pancera, M., Koromyslova, A., Hansman, G.
PDB entry 8en4: Structure of GII.4 norovirus in complex with Nanobody 53
Classification: VIRAL PROTEIN
Source organism: Norovirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-09-28
Authors: Kher, G., Sabin, C., Koromyslova, A., Pancera, M., Hansman, G.
PDB entry 8en5: Structure of GII.4 norovirus in complex with Nanobody 56
Classification: VIRAL PROTEIN
Source organism: Norovirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-28
Authors: Kher, G., Sabin, C., Pancera, M., Koromyslova, A., Hansman, G.
PDB entry 8en6: Structure of GII.4 norovirus in complex with Nanobody 76
Classification: VIRAL PROTEIN
Source organism: Norovirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-28
Authors: Kher, G., Sabin, C., Pancera, M., Koromyslova, A., Hansman, G.
PDB entry 8en7: Mouse apoferritin heavy chain without zinc determined using single-particle cryo-EM with Apollo camera.
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.68 Å
Deposited: 2022-09-28
Authors: Peng, R., Fu, X., Mendez, J.H., Randolph, P.H., Bammes, B., Stagg, S.M.
PDB entry 8en8: Cross-reactive 3180 TCR recognition of HLA-B*35:01-NP4 epitope from 1972 influenza strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.70001 Å
Deposited: 2022-09-29
Authors: Littler, D.R., Rossjohn, J.
PDB entry 8en9: TehA native-SAD structure determined at 5 keV with a helium environment
Classification: MEMBRANE PROTEIN
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-09-29
Authors: Karasawa, A., Andi, B., Ruchs, M.R., Shi, W., McSweeney, S., Hendrickson, W.A., Liu, Q.
PDB entry 8ena: Thaumatin native-SAD structure determined at 5 keV with a helium environmet
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-09-29
Authors: Karasawa, A., Andi, B., Ruchs, M.R., Shi, W., McSweeney, S., Hendrickson, W.A., Liu, Q.
PDB entry 8enb: Crystal structure of LGR ligand alpha2/beta5 from C. elegans in crystal form 2
Classification: STRUCTURAL PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-09-29
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8enc: Helical reconstruction of the human cardiac actin-tropomyosin-myosin loop 4 7G mutant complex
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-09-29
Authors: Doran, M.H., Lehman, W., Rynkiewicz, M.J.
PDB entry 8end: Crystal structure of LGR ligand alpha2/beta5 from C. elegans in crystal form 1 (SeMet)
Classification: STRUCTURAL PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.54 Å
Deposited: 2022-09-29
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8ene: Aldehyde dehydrogenase 1 family member A1 from human liver
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2022-09-29
Authors: Zhang, Z.
PDB entry 8enf: Crystal structure of LGR ligand alpha2/beta5 from C. elegans in crystal form 1 (native)
Classification: STRUCTURAL PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2022-09-29
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8eng: Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG) with Hemi-methylated CpG (forward strand)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-09-29
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 8enh: Cross-reactive 3180 TCR recognition of HLA-B*35:01-NP7 epitope from 2002 H3N2 influenza strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.50003 Å
Deposited: 2022-09-30
Authors: Littler, D.R., Rossjohn, J.
PDB entry 8eni: Crystal structure of Staphylococcus aureus biotin protein ligase in complex with inhibitor
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-09-30
Authors: Wilce, M.C.J., Cini, D.A.
PDB entry 8enj: Design, synthesis, biological evaluation, and X-ray crystallography of diarylpyrazole derivatives possessing terminal arylsulfonamide moieties as anti-proliferative agents targeting c-Jun N-terminal kinase (JNK)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2022-09-30
Authors: Park, H., Mersal, K.I.
PDB entry 8enk: Crystal structure of UAP56 in complex with Tho1, the yeast homolog of human SARNP
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-09-30
Authors: Xie, Y., Ren, Y.
PDB entry 8enl: CryoEM structure of the high pH turnover-inactivated nitrogenase MoFe-protein
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2022-09-30
Authors: Warmack, R.A., Maggiolo, A.O., Rees, D.C.
PDB entry 8enm: CryoEM structure of the high pH nitrogenase MoFe-protein under non-turnover conditions
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.14 Å
Deposited: 2022-09-30
Authors: Warmack, R.A., Maggiolo, A.O., Rees, D.C.
PDB entry 8enn: Homocitrate-deficient nitrogenase MoFe-protein from Azotobacter vinelandii nifV knockout
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii DJ
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2022-09-30
Authors: Warmack, R.A., Maggiolo, A.O., Rees, D.C.
PDB entry 8eno: Homocitrate-deficient nitrogenase MoFe-protein from A. vinelandii nifV knockout in complex with NafT
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii DJ
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2022-09-30
Authors: Warmack, R.A., Maggiolo, A.O., Rees, D.C.
PDB entry 8enp: UBE3A isoform 3 AZUL
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-09-30
Authors: Bregnard, T.A., Bezsonova, I.
PDB entry 8enq: E. coli CsgA fibril (218-pixel box size)
Classification: PROTEIN FIBRIL
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-09-30
Authors: Bu, F., Liu, B.
PDB entry 8enr: Cryo-EM structure of E. coli CsgA fibril (260 pixel box size)
Classification: PROTEIN FIBRIL
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-09-30
Authors: Bu, F., Liu, B.
PDB entry 8ens: Crystal structure of beta'-COPI-WD40 domain in complex with SARS-CoV-2 spike tail hepta-peptide
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-09-30
Authors: Dey, D., Hasan, S.S.
PDB entry 8ent: Interleukin-21 signaling complex with IL-21R and IL-2Rg
Classification: CYTOKINE/CYTOKINE RECEPTOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2022-09-30
Authors: Abhiraman, G.C., Jude, K.M., Garcia, K.C.
PDB entry 8enu: Structure of the C3bB proconvertase in complex with lufaxin
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lutzomyia longipalpis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2022-09-30
Authors: Andersen, J.F., Lei, H.
PDB entry 8env: In situ cryo-EM structure of Pseudomonas phage E217 tail baseplate in C6 map
Classification: VIRUS
Source organism: Pseudomonas phage vB_PaeM_E217
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2022-09-30
Authors: Li, F., Cingolani, G., Hou, C.
PDB entry 8enw: Crystal structure of beta'-COPI-WD40 domain in complex with SARS-CoV-2 clientized spike tail heptapeptide.
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-09-30
Authors: Dey, D., Hasan, S.S.
PDB entry 8enx: Crystal structure of beta'-COPI-WD40 domain Y33A mutant in complex with SARS-CoV-2 clientized spike tail heptapeptide.
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-09-30
Authors: Dey, D., Hasan, S.S.
PDB entry 8eny: Crystal structure of alpha-COPI-WD40 domain R13A mutant.
Classification: PROTEIN TRANSPORT
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-09-30
Authors: Dey, D., Hasan, S.S.
PDB entry 8enz: Crystal structure of alpha-COPI-WD40 domain K15A mutant.
Classification: PROTEIN TRANSPORT
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-09-30
Authors: Dey, D., Hasan, S.S.
PDB entry 8eo0: Crystal structure of alpha-COPI WD40 domain R300A mutant.
Classification: PROTEIN TRANSPORT
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-01
Authors: Dey, D., Hasan, S.S.
PDB entry 8eo1: Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG) with Hemi-methylated CpG (reverse strand)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2022-10-01
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 8eo2: Lufaxin a bifunctional inhibitor of complement and coagulation
Classification: BLOOD CLOTTING
Source organism: Lutzomyia longipalpis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2022-10-01
Authors: Andersen, J.F., Strayer, E.C.
PDB entry 8eo4: Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG) with Di-methylated CpG sites
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2022-10-02
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 8eo5: Crystal structure of the class A beta-lactamase precursor LRA-5 from an Alaskan soil metagenome at 1.8 Angstrom resolution
Classification: ANTIMICROBIAL PROTEIN
Source organism: uncultured soil bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-02
Authors: Power, P., D'Amico Gonzalez, G., Centron, D., Gutkind, G., Handelsman, J., Klinke, S.
PDB entry 8eo6: Crystal structure of metagenomic class A beta-lactamase precursor LRA-5 in complex with ceftazidime at 2.35 Angstrom resolution
Classification: ANTIMICROBIAL PROTEIN
Source organism: uncultured soil bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-10-02
Authors: Power, P., D'Amico Gonzalez, G., Centron, D., Gutkind, G., Handelsman, J., Klinke, S.
PDB entry 8eo7: Crystal structure of metagenomic beta-lactamase LRA-5 Y69Q/V166E mutant at 2.15 Angstrom resolution
Classification: ANTIMICROBIAL PROTEIN
Source organism: uncultured soil bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-02
Authors: Power, P., D'Amico Gonzalez, G., Centron, D., Gutkind, G., Handelsman, J., Klinke, S.
PDB entry 8eo8: Cross-reactive 3180 TCR recognition of HLA-B*35:01-NP8 epitope from 2005 H1N1 influenza strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-02
Authors: Littler, D.R., Rossjohn, J.
PDB entry 8eo9: The solution structure of abxF, an enzyme catalyzing the formation of chiral spiroketal of an antibiotics, (-)-ABX
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces sp.
Experimental method: SOLUTION NMR
Deposited: 2022-10-02
Authors: Jia, X., Yan, X., Mobli, M., Qu, X.
PDB entry 8eoa: Cryo-EM structure of human HSP90B-AIPL1 complex
Classification: CHAPERONE
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-10-02
Authors: Srivastava, D., Artemyev, N.O.
PDB entry 8eob: Cryo-EM structure of human HSP90B in the closed state
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-02
Authors: Srivastava, D., Artemyev, N.O.
PDB entry 8eoc: Crystal structure of E.coli DsbA mutant E24A/K58A
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2022-10-03
Authors: Wang, G., Heras, B.
PDB entry 8eod: EEVD:Sis1-81 (J domain) bound conformation
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae S288C
Experimental method: SOLUTION NMR
Deposited: 2022-10-03
Authors: Matos, C.O., Pinheiro, G.M.S., Ramos, C.H.I., Almeida, F.C.L.
PDB entry 8eoe: Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_LG)
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis subsp. subtilis str. 168; Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-10-03
Authors: Vishwakarm, R.K., Murakami, K.S.
PDB entry 8eof: Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_PG)
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis subsp. subtilis str. 168; Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-10-03
Authors: Vishwakarm, R.K., Murakami, K.S.
PDB entry 8eog: Structure of the human L-type voltage-gated calcium channel Cav1.2 complexed with L-leucine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-10-03
Authors: Chen, Z., Mondal, A., Abderemane-Ali, F., Minor, D.L.
PDB entry 8eoh: crystal structure of human Cytochrome P450 8B1 in complex with a C12-Pyridine Containing Steroid
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-10-03
Authors: Liu, J., Scott, E.E.
PDB entry 8eoi: Structure of a human EMC:human Cav1.2 channel complex in GDN detergent
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-10-03
Authors: Chen, Z., Mondal, A., Abderemane-Ali, F., Minor, D.L.
PDB entry 8eoj: Microsomal triglyceride transfer protein
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2022-10-03
Authors: Zhang, Z.
PDB entry 8eok: Structure of the C3bB proconvertase in complex with lufaxin and factor Xa
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lutzomyia longipalpis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2022-10-03
Authors: Andersen, J.F., Lei, H.
PDB entry 8eol: CRYSTAL STRUCTURE OF NAGB-II PHOSPHOSUGAR ISOMERASE FROM SHEWANELLA DENITRIFICANS OS217 AT 2.17 A RESOLUTION
Classification: ISOMERASE
Source organism: Shewanella denitrificans OS217
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2022-10-03
Authors: Rodriguez-Hernandez, A., Marcos-Viquez, J., Rodriguez-Romero, A., Bustos-Jaimes, I.
PDB entry 8eom: TUDOR DOMAIN OF TUMOR SUPPRESSOR P53BP1 WITH MFP-5973
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-10-03
Authors: The, J., Hong, Z., Headey, S., Gunzburg, M., Doak, B., James, L.I., Arrowsmith, C.H., Edwards, A.M., Brown, P.J., Structural Genomics Consortium (SGC)
PDB entry 8eon: Pseudomonas phage E217 baseplate complex
Classification: VIRUS
Source organism: Pseudomonas phage vB_PaeM_E217
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-10-03
Authors: Li, F., Cingolani, G., Hou, C.
PDB entry 8eoo: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibodies WRAIR-2063 and WRAIR-2151
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2022-10-03
Authors: Jensen, J.L., Sankhala, R.S., Joyce, M.G.
PDB entry 8eop: Cryo-EM Structure of Nanodisc reconstituted human ABCA7 EQ mutant in ATP bound closed state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-10-04
Authors: Alam, A., Le, L.T.M., Thompson, J.R.
PDB entry 8eor: Liver carboxylesterase 1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2022-10-04
Authors: Zhang, Z., Yu, E.
PDB entry 8eos: M. tuberculosis RNAP elongation complex with NusG and CMPCPP
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-04
Authors: Vishwakarma, R.K., Murakami, K.S.
PDB entry 8eot: M. tuberculosis RNAP elongation complex with NusG
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-10-04
Authors: Vishwakarma, R.K., Murakami, K.S.
PDB entry 8eov: Precisely patterned nanofibers made from extendable protein multiplexes
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2022-10-04
Authors: Bera, A.K., Bethel, N.P.
PDB entry 8eow: Eag Kv channel with voltage sensor in the up conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-10-04
Authors: Mandala, V.S., MacKinnon, R.
PDB entry 8eox: Precisely patterned nanofibers made from extendable protein multiplexes
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2022-10-04
Authors: Bera, A.K., Bethel, N.P.
PDB entry 8eoy: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI37
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2022-10-04
Authors: Yang, K.S., Liu, W.R.
PDB entry 8eoz: Precisely patterned nanofibers made from extendable protein multiplexes
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-10-04
Authors: Bera, A.K., Bethel, N.P., Kang, A.
PDB entry 8ep0: Eag Kv channel with voltage sensor in the intermediate conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2022-10-04
Authors: Mandala, V.S., MacKinnon, R.
PDB entry 8ep1: Eag Kv channel with voltage sensor in the down conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.4 Å
Deposited: 2022-10-04
Authors: Mandala, V.S., MacKinnon, R.
PDB entry 8ep2: The capsid structure of Aleutian Mink Disease Virus
Classification: VIRUS LIKE PARTICLE
Source organism: Aleutian mink disease virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2022-10-04
Authors: Mietzsch, M., McKenna, R.
PDB entry 8ep4: Structure of Bacple_01703
Classification: HYDROLASE
Source organism: Phocaeicola plebeius DSM 17135
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-10-05
Authors: Ulaganathan, T., Cygler, M.
PDB entry 8ep5: Solution NMR structure of a computationally designed mastoparan-like peptide, mastoparan-R1
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-10-05
Authors: Freitas, C.D.P., Oshiro, K.G.N., Macedo, M.L.R., Cardoso, M.H., Franco, O.L., Liao, L.M.
PDB entry 8ep6: Crystal Structure of the Beta-lactamase Class D from Chitinophaga pinensis in complex with Avibactam
Classification: HYDROLASE/INHIBITOR
Source organism: Chitinophaga pinensis DSM 2588
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-10-05
Authors: Maltseva, N., Kim, Y., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8ep7: Crystal Structure of the Ketol-acid Reductoisomerase from Bacillus anthracis in complex with NADP
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis str. 'Ames Ancestor'
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-10-05
Authors: Kim, Y., Maltseva, N., Osipiuk, J., Gu, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8ep8: Engineering Crystals with Tunable Symmetries from 14- or 16-Base-Long DNA Strands
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-10-05
Authors: Zhang, C., Zhao, J., Lu, B., Sha, R., Seeman, N.C., Noinaj, N., Mao, C.
PDB entry 8ep9: The capsid structure of Human Parvovirus 4
Classification: VIRUS LIKE PARTICLE
Source organism: Human parvovirus 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2022-10-05
Authors: Mietzsch, M., McKenna, R.
PDB entry 8epa: Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-10-05
Authors: Franklin, M.C., Romero Hernandez, A.
PDB entry 8epb: Engineering Crystals with Tunable Symmetries from 14- or 16-Base-Long DNA Strands
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2022-10-05
Authors: Zhang, C., Zhao, J., Lu, B., Sha, R., Seeman, N.C., Noinaj, N., Mao, C.
PDB entry 8epc: Crystal structure of human coagulation factor IXa (S195A), apo-form
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2022-10-05
Authors: Kolyadko, V.N., Krishnaswamy, S.
PDB entry 8epd: Engineering Crystals with Tunable Symmetries from 14- or 16-Base-Long DNA Strands
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2022-10-05
Authors: Zhang, C., Zhao, J., Lu, B., Sha, R., Seeman, N.C., Noinaj, N., Mao, C.
PDB entry 8epe: Engineering Crystals with Tunable Symmetries from 14- or 16-Base-Long DNA Strands
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-10-05
Authors: Zhang, C., Zhao, J., Lu, B., Sha, R., Seeman, N.C., Noinaj, N., Mao, C.
PDB entry 8epf: Engineering Crystals with Tunable Symmetries from 14- or 16-Base-Long DNA Strands
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2022-10-05
Authors: Zhang, C., Zhao, J., Lu, B., Sha, R., Seeman, N.C., Noinaj, N., Mao, C.
PDB entry 8epg: Engineering Crystals with Tunable Symmetries from 14- or 16-Base-Long DNA Strands
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-05
Authors: Zhang, C., Zhao, J., Lu, B., Sha, R., Seeman, N.C., Noinaj, N., Mao, C.
PDB entry 8eph: Crystal structure of human coagulation factor IXa (S195A), apo-form, DES-GLA
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-10-05
Authors: Kolyadko, V.N., Krishnaswamy, S.
PDB entry 8epi: Engineering Crystals with Tunable Symmetries from 14- or 16-Base-Long DNA Strands
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-10-05
Authors: Zhang, C., Zhao, J., Lu, B., Sha, R., Seeman, N.C., Noinaj, N., Mao, C.
PDB entry 8epj: Co-crystal structure of Chaetomium glucosidase with compound 17
Classification: HYDROLASE/INHIBITOR
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-05
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8epk: Complex of anticoagulant RNA aptamer and human coagulation factor IXa (S195A)
Classification: BLOOD CLOTTING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-10-05
Authors: Kolyadko, V.N., Krishnaswamy, S.
PDB entry 8epl: Human R-type voltage-gated calcium channel Cav2.3 at 3.1 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-06
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8epm: Human R-type voltage-gated calcium channel Cav2.3 CH2II-deleted mutant at 3.1 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-06
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8epn: Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 in the 3-RBD Down conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-10-06
Authors: Williams, J.A., Harshbarger, W.
PDB entry 8epo: Co-crystal structure of Chaetomium glucosidase with compound 18
Classification: HYDROLASE/INHIBITOR
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-10-06
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8epp: Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 with two RBDs in the open conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-06
Authors: Williams, J.A., Harshbarger, W.
PDB entry 8epq: Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 with two RBDs exposed
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-10-06
Authors: Williams, J.A., Harshbarger, W.
PDB entry 8epr: Co-crystal structure of Chaetomium glucosidase with compound 19
Classification: HYDROLASE/INHIBITOR
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2022-10-06
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8eps: Crystal Structure of Acetyl-CoA synthetase in complex with an allyl ester AMP inhibitor from Cryptococcus neoformans H99
Classification: LIGASE
Source organism: Cryptococcus neoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-10-06
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8ept: UBE3A isoform 2 AZUL domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-10-06
Authors: Bregnard, T.A., Bezsonova, I.
PDB entry 8epu: 1.6 A crystal structure of the lipocalin dog allergen Can f 1 with the C118S mutation
Classification: ALLERGEN
Source organism: Canis lupus familiaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-06
Authors: Min, J., Pedersen, L.C., Geoffrey, M.A.
PDB entry 8epv: 2.2 A crystal structure of the lipocalin cat allergen Fel d 7
Classification: ALLERGEN
Source organism: Felis catus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-10-06
Authors: Min, J., Pedersen, L.C., Geoffrey, M.A.
PDB entry 8epw: Crystal Structure of KRAS4b-G13D (GMPPNP-bound) in complex with RAS-binding domain (RBD) of RAF1/CRAF
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-06
Authors: Tran, T.H., Chan, A.H., Dharmaiah, S., Simanshu, D.K.
PDB entry 8epx: Type IIS Restriction Endonuclease PaqCI, DNA bound
Classification: DNA BINDING PROTEIN
Source organism: Paucibacter aquatile; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2022-10-06
Authors: Kennedy, M.A., Stoddard, B.L.
PDB entry 8epy: The solution structure of abxF in complex with its product (-)-ABX, an enzyme catalyzing the formation of the chiral spiroketal of an anthrabenzoxocinone antibiotic, (-)-ABX
Classification: BIOSYNTHETIC PROTEIN/ANTIBIOTIC
Source organism: Streptomyces sp.
Experimental method: SOLUTION NMR
Deposited: 2022-10-06
Authors: Jia, X., Yan, X., Qu, X., Mobli, M.
PDB entry 8epz: Crystal structure of Fe-S cluster-dependent dehydratase from Paralcaligenes ureilyticus in complex with Mn
Classification: LYASE
Source organism: Paralcaligenes ureilyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-10-07
Authors: Bayaraa, T., Lonhienne, T., Guddat, L.W.
PDB entry 8eq0: Escherichia coli pyruvate kinase G381A
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2022-10-07
Authors: Donovan, K.A., Coombes, D., Dobson, R.C.J., Cooper, T.F.
PDB entry 8eq1: Escherichia coli pyruvate kinase D127N
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-10-07
Authors: Donovan, K.A., Coombes, D., Dobson, R.C.J., Cooper, T.F.
PDB entry 8eq3: Escherichia coli pyruvate kinase A301T
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2022-10-07
Authors: Donovan, K.A., Coombes, D., Dobson, R.C.J., Cooper, T.F.
PDB entry 8eq4: Human PAC in nanodisc at pH 4.0 with PI(4,5)P2 diC8
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2022-10-07
Authors: Ruan, Z., Lu, W.