LiteFold/PDB huggingface dataset:
PDB entry 5wyz: Crystal structure of human TLR8 in complex with CU-CPT9b
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-01-16
Authors: Tanji, H., Ohto, U., Shimizu, T.
PDB entry 5wz1: Crystal structure of Zika virus NS5 methyltransferase bound to S-adenosyl-L-methionine
Classification: TRANSFERASE
Source organism: Zika virus (strain Mr 766)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.507 Å
Deposited: 2017-01-16
Authors: Duan, W., Song, H., Qi, J., Shi, Y., Gao, G.F.
PDB entry 5wz2: Crystal structure of Zika virus NS5 methyltransferase bound to SAM and RNA analogue (m7GpppA)
Classification: TRANSFERASE
Source organism: Zika virus (strain Mr 766)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-01-16
Authors: Duan, W., Song, H., Qi, J., Shi, Y., Gao, G.F.
PDB entry 5wz3: Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase(RdRP)
Classification: TRANSFERASE
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.804 Å
Deposited: 2017-01-16
Authors: Duan, W., Song, H., Qi, J., Shi, Y., Gao, G.F.
PDB entry 5wz4: Crystal structure of Mycobacterium tuberculosis VapC20 (Rv2549c), Sarcin-Ricin loop cleaving toxin
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.775 Å
Deposited: 2017-01-17
Authors: Thakur, K.G., Deep, A.
PDB entry 5wze: The structure of Pseudomonas aeruginosa aminopeptidase PepP
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.783 Å
Deposited: 2017-01-17
Authors: Bao, R., Peng, C.T., Liu, L., He, L.H., Li, C.C., Li, T., Shen, Y.L., Zhu, Y.B., Song, Y.J.
PDB entry 5wzf: Crystal structure of Mycobacterium tuberculosis VapC20 (Rv2549c), Sarcin-Ricin loop cleaving toxin
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2017-01-17
Authors: Thakur, K.G., Deep, A.
PDB entry 5wzg: Structure of APUM23-GAAUUGACGG
Classification: RNA BINDING PROTEIN/RNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2017-01-18
Authors: Bao, H., Wang, N., Wang, C., Jiang, Y., Wu, J., Shi, Y.
PDB entry 5wzh: Structure of APUM23-GGAAUUGACGG
Classification: RNA BINDING PROTEIN/RNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.509 Å
Deposited: 2017-01-18
Authors: Bao, H., Wang, N., Wang, C., Jiang, Y., Wu, J., Shi, Y.
PDB entry 5wzi: Structure of APUM23-GGAGUUGACGG
Classification: RNA BINDING PROTEIN/RNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2017-01-18
Authors: Bao, H., Wang, N., Wang, C., Jiang, Y., Wu, J., Shi, Y.
PDB entry 5wzj: Structure of APUM23-GGAUUUGACGG
Classification: RNA BINDING PROTEIN/RNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.101 Å
Deposited: 2017-01-18
Authors: Bao, H., Wang, N., Wang, C., Jiang, Y., Wu, J., Shi, Y.
PDB entry 5wzk: Structure of APUM23-deletion-of-insert-region-GGAAUUGACGG
Classification: RNA BINDING PROTEIN/RNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-01-18
Authors: Bao, H., Wang, N., Wang, C., Jiang, Y., Wu, J., Shi, Y.
PDB entry 5wzm: Crystal structure of human secreted phospholipase A2 group IIE
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-01-18
Authors: Hou, S., Xu, J., Xu, T., Liu, J.
PDB entry 5wzn: Alpha-N-acetylgalactosaminidase NagBb from Bifidobacterium bifidum - GalNAc complex
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-01-18
Authors: Sato, M., Arakawa, T., Ashida, H., Fushinobu, S.
PDB entry 5wzo: Crystal structure of human secreted phospholipase A2 group IIE, crystallized with calcium
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-01-18
Authors: Hou, S., Xu, J., Xu, T., Liu, J.
PDB entry 5wzp: Alpha-N-acetylgalactosaminidase NagBb from Bifidobacterium bifidum - ligand free
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2017-01-18
Authors: Sato, M., Arakawa, T., Ashida, H., Fushinobu, S.
PDB entry 5wzq: Alpha-N-acetylgalactosaminidase NagBb from Bifidobacterium bifidum - quadruple mutant
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-01-18
Authors: Sato, M., Arakawa, T., Ashida, H., Fushinobu, S.
PDB entry 5wzr: Alpha-N-acetylgalactosaminidase NagBb from Bifidobacterium bifidum - Gal-NHAc-DNJ complex
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2017-01-18
Authors: Sato, M., Arakawa, T., Ashida, H., Fushinobu, S.
PDB entry 5wzs: Crystal structure of human secreted phospholipase A2 group IIE with Compound 8
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-01-18
Authors: Hou, S., Xu, J., Xu, T., Liu, J.
PDB entry 5wzt: Crystal structure of human secreted phospholipase A2 group IIE with Compound 14
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-01-18
Authors: Hou, S., Xu, J., Xu, T., Liu, J.
PDB entry 5wzu: Crystal structure of human secreted phospholipase A2 group IIE with Compound 24
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-01-18
Authors: Hou, S., Xu, J., Xu, T., Liu, J.
PDB entry 5wzv: Crystal structure of human secreted phospholipase A2 group IIE with Me-indoxam
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-01-18
Authors: Hou, S., Xu, J., Xu, T., Liu, J.
PDB entry 5wzw: Crystal structure of human secreted phospholipase A2 group IIE with LY311727
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-01-18
Authors: Hou, S., Xu, J., Xu, T., Liu, J.
PDB entry 5wzx: Structural basis for a pentacyclic oleanane-type triterpenoid as a ligand of FXR
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2017-01-19
Authors: Lu, Y., Li, Y.
PDB entry 5wzy: Crystal structure of the P2X4 receptor from zebrafish in the presence of CTP at 2.8 Angstroms
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.799 Å
Deposited: 2017-01-19
Authors: Kasuya, G., Hattori, M., Nureki, O.
PDB entry 5wzz: The SIAH E3 ubiquitin ligases promote Wnt/ beta-catenin signaling through mediating Wnt-induced Axin degradation
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.103 Å
Deposited: 2017-01-19
Authors: Ji, L., Jiang, B., Jiang, X., Charlat, O., Chen, A., Mickanin, C., Bauer, A., Xu, W., Yan, X.-X., Cong, F.
PDB entry 5x00: Nucleoside Diphosphate Kinase from Vibrio cholerae is a Thermolabile Type II tetramer
Classification: TRANSFERASE
Source organism: Vibrio cholerae serotype O1 (strain M66-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2017-01-19
Authors: Agnihotri, P., Mishra, A.K., Pratap, J.V.
PDB entry 5x02: Crystal structure of the FLT3 kinase domain bound to the inhibitor FF-10101
Classification: TRANSFERASE/TRANSFERASE INIHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.401 Å
Deposited: 2017-01-19
Authors: Fujikawa, N., Hirano, D., Takasaki, M., Terada, D., Hagiwara, S., Park, S.-Y., Sugiyama, K.
PDB entry 5x03: Crystal structure of the C-terminal domain of Bacillus subtilis GabR reveals a closed conformation by the binding of gamma-aminobutyric acid, inducing the transcriptional activation
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-01-19
Authors: Park, S.A., Lee, K.S.
PDB entry 5x04: 12:0-ACP thioesterase from Umbellularia californica
Classification: HYDROLASE
Source organism: Umbellularia californica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2017-01-19
Authors: Xue, S., Feng, Y.
PDB entry 5x06: DNA replication regulation protein
Classification: REPLICATION
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 3.237 Å
Deposited: 2017-01-20
Authors: Kim, J., Cho, Y.
PDB entry 5x07: Crystal structure of FOXA2 DNA binding domain bound to a full consensus DNA site
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.796 Å
Deposited: 2017-01-20
Authors: Li, J., Guo, M., Zhou, Z., Jiang, L., Chen, X., Qu, L., Wu, D., Chen, Z., Chen, L., Chen, Y.
PDB entry 5x08: Crystal structure of broadly neutralizing anti-HIV-1 antibody 4E10, mutant Npro, with peptide bound
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus type 1 (MAL ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2017-01-20
Authors: Caaveiro, J.M.M., Rujas, E., Nieva, J.L., Tsumoto, K.
PDB entry 5x09: Crystal structure of subunit A mutant P235A/S238C of the A-ATP synthase from pyrococcus horikoshii OT3
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2017-01-20
Authors: Dhirendra, S., Gruber, G.
PDB entry 5x0b: Free serine kinase in complex with AMP
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2017-01-20
Authors: Nagata, R., Fujihashi, M., Miki, K.
PDB entry 5x0e: Free serine kinase (E30A mutant) in complex with phosphoserine and AMP
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-01-20
Authors: Nagata, R., Fujihashi, M., Miki, K.
PDB entry 5x0f: Free serine kinase (E30A mutant) in complex with AMP
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2017-01-20
Authors: Nagata, R., Fujihashi, M., Miki, K.
PDB entry 5x0g: Free serine kinase (E30A mutant) in complex with ADP
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-01-20
Authors: Nagata, R., Fujihashi, M., Miki, K.
PDB entry 5x0i: Crystal structure of PKM2 R399E mutant complexed with FBP and serine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2017-01-20
Authors: Wang, W.C., Chen, T.J.
PDB entry 5x0j: Free serine kinase (E30Q mutant) in complex with phosphoserine and AMP
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2017-01-20
Authors: Nagata, R., Fujihashi, M., Miki, K.
PDB entry 5x0k: Free serine kinase (E30Q mutant) in complex with AMP
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2017-01-20
Authors: Nagata, R., Fujihashi, M., Miki, K.
PDB entry 5x0m: Structure of a eukaryotic voltage-gated sodium channel at near atomic resolution
Classification: MEMBRANE PROTEIN
Source organism: Periplaneta americana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2017-01-21
Authors: Shen, H., Zhou, Q., Pan, X., Li, Z., Wu, J., Yan, N.
PDB entry 5x0n: Regulatory domain of variant C227S AphB from Vibrio vulnificus
Classification: TRANSCRIPTION
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.993 Å
Deposited: 2017-01-22
Authors: Song, S., Park, N., Ha, N.-C.
PDB entry 5x0o: Regulatory domain of AphB treated with Cumene hydroperoxide from Vibrio vulnificus
Classification: TRANSCRIPTION
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2017-01-22
Authors: Song, S., Park, N., Ha, N.-C.
PDB entry 5x0q: OxyR2 E204G variant (Cl-bound) from Vibrio vulnificus
Classification: DNA BINDING PROTEIN
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2017-01-23
Authors: Jo, I., Ha, N.-C.
PDB entry 5x0r: Crystal Structure of PXR LBD Complexed with SJB7
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.665 Å
Deposited: 2017-01-23
Authors: Lv, L., Lin, W., Chai, S.C., Zhang, Q., Chen, T.
PDB entry 5x0s: Solution NMR structure of peptide toxin SsTx from Scolopendra subspinipes mutilans
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2017-01-23
Authors: Wu, F., Luo, L., Qu, D., Zhang, L., Tian, C., Lai, R.
PDB entry 5x0t: Crystal structure of CD147 C2 domain in complex with Fab of its monoclonal antibody 6H8
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-01-23
Authors: Lin, P., Zhang, M.-Y., Ye, S., Chen, X., Yu, X.-L., Zhang, R.-G., Zhu, P., Chen, Z.-N.
PDB entry 5x0v: Reduced form of regulatory domain of OxyR2 from Vibrio vulnificus
Classification: DNA BINDING PROTEIN
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-01-23
Authors: Jo, I., Ha, N.-C.
PDB entry 5x0w: Molecular mechanism for the binding between Sharpin and HOIP
Classification: LIGASE/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2017-01-23
Authors: Liu, J., Li, F., Cheng, X., Pan, L.
PDB entry 5x0x: Complex of Snf2-Nucleosome complex with Snf2 bound to position +6 of the nucleosome
Classification: STRUCTURAL PROTEIN/HYDROLASE/DNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.97 Å
Deposited: 2017-01-23
Authors: Li, M., Liu, X., Xia, X., Chen, Z., Li, X.
PDB entry 5x0y: Complex of Snf2-Nucleosome complex with Snf2 bound to SHL2 of the nucleosome
Classification: STRUCTURAL PROTEIN/HYDROLASE/DNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.69 Å
Deposited: 2017-01-23
Authors: Li, M., Liu, X., Xia, X., Chen, Z., Li, X.
PDB entry 5x0z: Crystal structure of FliM-SpeE complex from H. pylori
Classification: TRANSFERASE/MOTOR PROTEIN
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-01-23
Authors: Zhang, H., Au, S.W.N.
PDB entry 5x11: Crystal structure of Bacillus subtilis PadR in complex with operator DNA
Classification: TRANSCRIPTION/DNA
Source organism: Bacillus subtilis subsp. spizizenii strain W23; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2017-01-24
Authors: Park, S.C., Kwak, Y.M., Song, W.S., Hong, M., Yoon, S.I.
PDB entry 5x12: Crystal structure of Bacillus subtilis PadR
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis subsp. spizizenii strain W23
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-01-24
Authors: Park, S.C., Kwak, Y.M., Song, W.S., Hong, M., Yoon, S.I.
PDB entry 5x13: Crystal structure of Bacillus subtilis PadR in complex with p-coumaric acid
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis subsp. spizizenii strain W23
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-01-24
Authors: Park, S.C., Kwak, Y.M., Song, W.S., Hong, M., Yoon, S.I.
PDB entry 5x14: Crystal structure of Bacillus subtilis PadR in complex with ferulic acid
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis subsp. spizizenii strain W23
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2017-01-24
Authors: Park, S.C., Kwak, Y.M., Song, W.S., Hong, M., Yoon, S.I.
PDB entry 5x15: Crystal structure of Streptomyces coelicolor RraAS2, an unusual member of the RNase ES inhibitor RraA protein family
Classification: TRANSFERASE INHIBITOR
Source organism: Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.094 Å
Deposited: 2017-01-24
Authors: Park, N., Jo, I., Ha, N.-C.
PDB entry 5x16: Sirt6 apo structure
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2017-01-24
Authors: Zhang, J., Huang, Z., Song, K.
PDB entry 5x17: Crystal structure of murine CK1d in complex with ADP
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-01-25
Authors: Kikuchi, M., Shinohara, Y., Ueda, H.R., Umehara, T.
PDB entry 5x18: Crystal structure of Casein kinase I homolog 1
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-01-25
Authors: Kikuchi, M., Shinohara, Y., Ueda, H.R., Umehara, T.
PDB entry 5x19: CO bound cytochrome c oxidase at 100 micro sec after pump laser irradiation to release CO from O2 reduction center
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-01-25
Authors: Shimada, A., Kubo, M., Baba, S., Yamashita, K., Hirata, K., Ueno, G., Nomura, T., Kimura, T., Shinzawa-Itoh, K., Baba, J., Hatano, K., Eto, Y., Miyamoto, A., Murakami, H., Kumasaka, T., Owada, S., Tono, K., Yabashi, M., Yamaguchi, Y., Yanagisawa, S., Sakaguchi, M., Ogura, T., Komiya, R., Yan, J., Yamashita, E., Yamamoto, M., Ago, H., Yoshikawa, S., Tsukihara, T.
PDB entry 5x1a: Crystal Structure of Human CRMP-2
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.821 Å
Deposited: 2017-01-25
Authors: Nitta, R., Tomabechi, Y., Aoki, M., Shirouzu, M.
PDB entry 5x1b: CO bound cytochrome c oxidase at 20 nsec after pump laser irradiation to release CO from O2 reduction center
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-01-25
Authors: Shimada, A., Kubo, M., Baba, S., Yamashita, K., Hirata, K., Ueno, G., Nomura, T., Kimura, T., Shinzawa-Itoh, K., Baba, J., Hatano, K., Eto, Y., Miyamoto, A., Murakami, H., Kumasaka, T., Owada, S., Tono, K., Yabashi, M., Yamaguchi, Y., Yanagisawa, S., Sakaguchi, M., Ogura, T., Komiya, R., Yan, J., Yamashita, E., Yamamoto, M., Ago, H., Yoshikawa, S., Tsukihara, T.
PDB entry 5x1c: Crystal Structure of Human CRMP-2 without C-terminal Tail
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.101 Å
Deposited: 2017-01-25
Authors: Nitta, R., Tomabechi, Y., Aoki, M., Shirouzu, M.
PDB entry 5x1d: Crystal Structure of T246A-N247A Human CRMP-2 Mutant
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-01-25
Authors: Nitta, R., Tomabechi, Y., Aoki, M., Shirouzu, M.
PDB entry 5x1e: Structure of DotL(656-783)-IcmS-IcmW derived from Legionella pneumophila
Classification: PROTEIN TRANSPORT
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.999 Å
Deposited: 2017-01-25
Authors: Kim, J.D., Kwak, M.J., Oh, B.H.
PDB entry 5x1f: CO bound cytochrome c oxidase without pump laser irradiation at 278K
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-01-25
Authors: Shimada, A., Kubo, M., Baba, S., Yamashita, K., Hirata, K., Ueno, G., Nomura, T., Kimura, T., Shinzawa-Itoh, K., Baba, J., Hatano, K., Eto, Y., Miyamoto, A., Murakami, H., Kumasaka, T., Owada, S., Tono, K., Yabashi, M., Yamaguchi, Y., Yanagisawa, S., Sakaguchi, M., Ogura, T., Komiya, R., Yan, J., Yamashita, E., Yamamoto, M., Ago, H., Yoshikawa, S., Tsukihara, T.
PDB entry 5x1g: WHAMM's Microtubule binding motif
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2017-01-25
Authors: Liu, T., Wang, H.W.
PDB entry 5x1h: Structure of Legionella pneumophila DotN
Classification: PROTEIN TRANSPORT
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.005 Å
Deposited: 2017-01-26
Authors: Kwak, M.J., Oh, B.H.
PDB entry 5x1i: Vanillate/3-O-methylgallate O-demethylase, LigM, substrate free form
Classification: OXIDOREDUCTASE
Source organism: Sphingobium sp. SYK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-01-26
Authors: Harada, A., Senda, T.
PDB entry 5x1j: Vanillate/3-O-methylgallate O-demethylase, LigM, vanillate complex form
Classification: OXIDOREDUCTASE
Source organism: Sphingobium sp. SYK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-01-26
Authors: Harada, A., Senda, T.
PDB entry 5x1k: Vanillate/3-O-methylgallate O-demethylase, LigM, 3-O-methylgallate complex form
Classification: OXIDOREDUCTASE
Source organism: Sphingobium sp. SYK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2017-01-26
Authors: Harada, A., Senda, T.
PDB entry 5x1l: Vanillate/3-O-methylgallate O-demethylase, LigM, tetrahydrofolate complex form
Classification: OXIDOREDUCTASE
Source organism: Sphingobium sp. SYK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-01-26
Authors: Harada, A., Senda, T.
PDB entry 5x1m: Vanillate/3-O-methylgallate O-demethylase, LigM, protocatechuate-tetrahydrofolate complex form
Classification: OXIDOREDUCTASE
Source organism: Sphingobium sp. SYK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-01-26
Authors: Harada, A., Senda, T.
PDB entry 5x1n: Vanillate/3-O-methylgallate O-demethylase, LigM, protocatechuate-tetrahydrofolate complex form
Classification: OXIDOREDUCTASE
Source organism: Sphingobium sp. SYK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-01-26
Authors: Harada, A., Senda, T.
PDB entry 5x1o: PI(4,5)P2 lipid binding induced a reorientation of FGF2 molecules near membrane surface to facilitate the unconventional oligomerization-dependent secretion process as revealed by a combined FTIR/NMR/X-ray study
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-01-26
Authors: Tsao, Y.H.
PDB entry 5x1q: PpkA-294 with ATP and MnCl2
Classification: TRANSFERASE
Source organism: Serratia sp. FS14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.602 Å
Deposited: 2017-01-26
Authors: Li, P.P., Ran, T.T., Xu, D.Q., Wang, W.W.
PDB entry 5x1r: PpkA-294 apo form
Classification: TRANSFERASE
Source organism: Serratia sp. FS14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-01-26
Authors: Li, P.P., Ran, T.T., Xu, D.Q., Wang, W.W.
PDB entry 5x1s: PpkA-294 with Amppcp
Classification: TRANSFERASE
Source organism: Serratia sp. FS14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2017-01-26
Authors: Li, P.P., Ran, T.T., Xu, D.Q., Wang, W.W.
PDB entry 5x1t: PpkA-294
Classification: TRANSFERASE
Source organism: Serratia sp. FS14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2017-01-26
Authors: Li, P.P., Ran, T.T., Xu, D.Q., Wang, W.W.
PDB entry 5x1u: Structure of the cytosolic domain of DotM derived from Legionella pneumophila
Classification: PROTEIN TRANSPORT
Source organism: Legionella pneumophila (strain Lens)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-01-26
Authors: Kwak, M.J., Kim, Y.G., Oh, B.H.
PDB entry 5x1v: PKM2 in complex with compound 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-01-27
Authors: Matsui, Y., Hanzawa, H.
PDB entry 5x1w: PKM2 in complex with compound 5
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2017-01-27
Authors: Matsui, Y., Hanzawa, H.
PDB entry 5x1x: Solution NMR Structure of DNA Mismatch Repair Protein MutT (Family Nudix Hydrolase) from Methicillin Resistant Staphylococcus aureus 252
Classification: HYDROLASE
Source organism: Staphylococcus aureus subsp. aureus MN8
Experimental method: SOLUTION NMR
Deposited: 2017-01-27
Authors: Wahab, A., Durreshahwar, S., Schwalbe, H., Richter, C., Choudhary, M.I.
PDB entry 5x1y: Structure of mercuric reductase from Lysinibacillus sphaericus
Classification: OXIDOREDUCTASE
Source organism: Lysinibacillus sphaericus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.48 Å
Deposited: 2017-01-28
Authors: Khan, F., Suguna, K.
PDB entry 5x20: The ternary structure of D-mandelate dehydrogenase with NADH and anilino(oxo)acetate
Classification: OXIDOREDUCTASE
Source organism: Enterococcus faecium DO
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-01-29
Authors: Furukawa, N., Miyanaga, A., Nakajima, M., Taguchi, H.
PDB entry 5x21: Crystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridimycin (PUM)
Classification: TRANSFERASE/DNA
Source organism: Thermus thermophilus; Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039); Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.323 Å
Deposited: 2017-01-29
Authors: Zhang, Y., Ebright, R.
PDB entry 5x22: Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP
Classification: TRANSFERASE/DNA
Source organism: Thermus thermophilus; Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039); Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2017-01-29
Authors: Zhang, Y., Ebright, R.
PDB entry 5x23: Crystal structure of CYP2C9 genetic variant A477T (*30) in complex with multiple losartan molecules
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-01-30
Authors: Maekawa, K., Adachi, M., Shah, M.B.
PDB entry 5x24: Crystal structure of CYP2C9 genetic variant I359L (*3) in complex with multiple losartan molecules
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2017-01-30
Authors: Maekawa, K., Adachi, M., Shah, M.B.
PDB entry 5x26: Crystal structure of EGFR 696-1022 L858R in complex with SKLB(3)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.951 Å
Deposited: 2017-01-31
Authors: Yun, C.H.
PDB entry 5x27: Crystal structure of EGFR 696-1022 L858R in complex with SKLB(5)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.952 Å
Deposited: 2017-01-31
Authors: Yun, C.H.
PDB entry 5x28: Crystal structure of EGFR 696-1022 L858R in complex with SKLB(6)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.952 Å
Deposited: 2017-01-31
Authors: Yun, C.H.
PDB entry 5x29: NMR structure of the SARS Coronavirus E protein pentameric ion channel
Classification: VIRAL PROTEIN
Source organism: Human SARS coronavirus
Experimental method: SOLUTION NMR
Deposited: 2017-01-31
Authors: Torres, J., Surya, W., Li, Y.
PDB entry 5x2a: Crystal structure of EGFR 696-1022 T790M/V948R in complex with SKLB(3)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2017-01-31
Authors: Yun, C.H.
PDB entry 5x2b: Crystal structure of mouse sulfotransferase SULT7A1 complexed with PAP
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2017-01-31
Authors: Kanekiyo, M., Teramoto, T., Kakuta, Y.
PDB entry 5x2c: Crystal structure of EGFR 696-1022 T790M/V948R in complex with SKLB(5)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2017-01-31
Authors: Yun, C.H.
PDB entry 5x2d: Crystal structure of DLC like domain of CsTAL3 (83-177aa)
Classification: CELL ADHESION
Source organism: Clonorchis sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-01-31
Authors: Jo, C.H., Hwang, K.Y.
PDB entry 5x2e: Crystal structure of Calmodulin like domain of CsTAL3 (1-81aa)
Classification: CELL ADHESION
Source organism: Clonorchis sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.299 Å
Deposited: 2017-01-31
Authors: Jo, C.H., Hwang, K.Y.
PDB entry 5x2f: Crystal structure of EGFR 696-1022 T790M/V948R in complex with SKLB(6)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-01-31
Authors: Yun, C.H.
PDB entry 5x2g: Crystal structure of Campylobacter jejuni Cas9 in complex with sgRNA and target DNA (AGAAACC PAM)
Classification: HYDROLASE/RNA/DNA
Source organism: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-01-31
Authors: Yamada, M., Watanabe, Y., Hirano, H., Nakane, T., Ishitani, R., Nishimasu, H., Nureki, O.
PDB entry 5x2h: Crystal structure of Campylobacter jejuni Cas9 in complex with sgRNA and target DNA (AGAAACA PAM)
Classification: HYDROLASE/RNA/DNA
Source organism: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-01-31
Authors: Yamada, M., Watanabe, Y., Hirano, H., Nakane, T., Ishitani, R., Nishimasu, H., Nureki, O.
PDB entry 5x2i: Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide
Classification: LYASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2017-01-31
Authors: Zhao, W.X.
PDB entry 5x2j: Crystal structure of a recombinant hybrid manganese superoxide dismutase from Staphylococcus equorum and Staphylococcus saprophyticus
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus equorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2017-01-31
Authors: Retnoningrum, D.S., Yoshida, H., Arumsari, S., Kamitori, S., Ismaya, W.T.
PDB entry 5x2k: Crystal structure of EGFR 696-1022 T790M in complex with WZ4003
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.201 Å
Deposited: 2017-02-01
Authors: Zhu, S.J., Zhao, P., Yun, C.H.
PDB entry 5x2l: Crystal Structure of Human Serine Racemase
Classification: LYASE, ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.806 Å
Deposited: 2017-02-01
Authors: Obita, T., Matsumoto, K., Mori, H., Toyooka, N., Mizuguchi, M.
PDB entry 5x2m: Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-glutamine
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Oryzias latipes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.206 Å
Deposited: 2017-02-02
Authors: Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A.
PDB entry 5x2n: Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-alanine
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Oryzias latipes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-02-02
Authors: Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A.
PDB entry 5x2o: Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-arginine
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Oryzias latipes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-02-02
Authors: Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A.
PDB entry 5x2p: Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-glutamate
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Oryzias latipes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.608 Å
Deposited: 2017-02-02
Authors: Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A.
PDB entry 5x2q: Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with glycine
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Oryzias latipes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-02-02
Authors: Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A.
PDB entry 5x2r: Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 10 mM phosphate pH 6.9.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-02-02
Authors: Ohki, M., Park, S.-Y.
PDB entry 5x2s: Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 4 mM bezafibrate pH 6.5.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2017-02-02
Authors: Ohki, M., Park, S.-Y.
PDB entry 5x2t: Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 4 mM bezafibrate pH 7.2.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2017-02-02
Authors: Ohki, M., Park, S.-Y.
PDB entry 5x2u: Direct Observation of Conformational Population Shifts in Hemoglobin: Crystal Structure of Half-Liganded Hemoglobin after Adding 80 mM phosphate pH 6.7.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2017-02-02
Authors: Ohki, M., Park, S.-Y.
PDB entry 5x2v: Crystal structure of Pseudomonas putida methionine gamma-lyase wild type without sulfate ion
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-02-02
Authors: Shiba, T., Sato, D., Harada, S.
PDB entry 5x2w: Crystal structure of Pseudomonas putida methionine gamma-lyase wild type with L-methionine intermediates
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-02-02
Authors: Shiba, T., Sato, D., Harada, S.
PDB entry 5x2x: Crystal structure of Pseudomonas putida methionine gamma-lyase wild type with L-homocysteine intermediates
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-02-02
Authors: Shiba, T., Sato, D., Harada, S.
PDB entry 5x2y: Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant without sulfate ion
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2017-02-02
Authors: Shiba, T., Sato, D., Harada, S.
PDB entry 5x2z: Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant with L-methionine intermediates
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-02-02
Authors: Shiba, T., Sato, D., Harada, S.
PDB entry 5x30: Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant with L-homocysteine intermediates.
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-02-02
Authors: Shiba, T., Sato, D., Harada, S.
PDB entry 5x31: Pseudoazurin from Alcaligenes faecalis (space group P65)
Classification: ELECTRON TRANSPORT
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-02-03
Authors: Fukuda, Y., Mizohata, E., Inoue, T.
PDB entry 5x32: Crystal structure of D-mannose isomerase
Classification: ISOMERASE
Source organism: Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.586 Å
Deposited: 2017-02-03
Authors: Kato, K., Saburi, W., Yao, M.
PDB entry 5x33: Leukotriene B4 receptor BLT1 in complex with BIIL260
Classification: MEMBRANE PROTEIN
Source organism: Cavia porcellus; Enterobacteria phage RB55
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2017-02-03
Authors: Hori, T., Hirata, K., Yamashita, K., Kawano, Y., Yamamoto, M., Yokoyama, S.
PDB entry 5x34: Solution structure of the Family 1 carbohydrate-binding module, unglycosylated form
Classification: HYDROLASE
Experimental method: SOLUTION NMR
Deposited: 2017-02-04
Authors: Feng, Y., Tan, Z.
PDB entry 5x35: Solution structure of the Family 1 carbohydrate-binding module with mannosylated Thr1
Classification: HYDROLASE
Experimental method: SOLUTION NMR
Deposited: 2017-02-04
Authors: Feng, Y., Tan, Z.
PDB entry 5x36: Solution structure of the Family 1 carbohydrate-binding module with mannosylated Ser3
Classification: HYDROLASE
Experimental method: SOLUTION NMR
Deposited: 2017-02-04
Authors: Feng, Y., Tan, Z.
PDB entry 5x37: Solution structure of the Family 1 carbohydrate-binding module with mannosylated Ser14
Classification: HYDROLASE
Experimental method: SOLUTION NMR
Deposited: 2017-02-04
Authors: Feng, Y., Tan, Z.
PDB entry 5x38: Solution structure of the Family 1 carbohydrate-binding module with glucosylated Ser3
Classification: HYDROLASE
Experimental method: SOLUTION NMR
Deposited: 2017-02-04
Authors: Feng, Y., Tan, Z.
PDB entry 5x39: Solution structure of the Family 1 carbohydrate-binding module Q2A mutant with mannosylated Ser3
Classification: HYDROLASE
Experimental method: SOLUTION NMR
Deposited: 2017-02-04
Authors: Feng, Y., Tan, Z.
PDB entry 5x3c: Solution structure of the Family 1 carbohydrate-binding module Y5A mutant with mannosylated Ser3
Classification: HYDROLASE
Experimental method: SOLUTION NMR
Deposited: 2017-02-04
Authors: Feng, Y., Tan, Z.
PDB entry 5x3d: Crystal structure of HEP-CMP-bound form of cytidylyltransferase (CyTase) domain of Fom1 from Streptomyces wedmorensis
Classification: TRANSFERASE
Source organism: Streptomyces wedmorensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2017-02-04
Authors: Tomita, T., Cho, S.H., Kuzuyama, T., Nishiyama, M.
PDB entry 5x3e: kinesin 6
Classification: MOTOR PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2017-02-04
Authors: Chen, Z., Guan, R., Zhang, L.
PDB entry 5x3f: Crystal structure of the YgjG-Protein A-Zpa963-PKA catalytic domain
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12); Mus musculus; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.38 Å
Deposited: 2017-02-05
Authors: Youn, S.J., Kwon, N.Y., Lee, J.H., Kim, J.H., Lee, H., Lee, J.O.
PDB entry 5x3g: The WT UNG crystal structure from Nitratifractor salsuginis
Classification: DNA BINDING PROTEIN
Source organism: Nitratifractor salsuginis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.021 Å
Deposited: 2017-02-06
Authors: Xie, W., Cao, W., Chen, R., Zhang, Z.
PDB entry 5x3h: The Y81G mutant of the UNG crystal structure from Nitratifractor salsuginis
Classification: DNA BINDING PROTEIN
Source organism: Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-02-06
Authors: Xie, W., Chen, R., Cao, W., Zhang, Z.
PDB entry 5x3i: Kfla1895 D451A mutant
Classification: HYDROLASE
Source organism: Kribbella flavida DSM 17836
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-02-06
Authors: Tanaka, Y., Chen, M., Tagami, T., Yao, M., Kimura, A.
PDB entry 5x3j: Kfla1895 D451A mutant in complex with cyclobis-(1->6)-alpha-nigerosyl
Classification: HYDROLASE
Source organism: Kribbella flavida DSM 17836
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-02-06
Authors: Tanaka, Y., Chen, M., Tagami, T., Yao, M., Kimura, A.
PDB entry 5x3k: Kfla1895 D451A mutant in complex with isomaltose
Classification: HYDROLASE
Source organism: Kribbella flavida DSM 17836
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-02-06
Authors: Tanaka, Y., Chen, M., Tagami, T., Yao, M., Kimura, A.
PDB entry 5x3l: Solution structure of a novel antimicrobial peptide, P1, from jumper ant Myrmecia pilosula
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2017-02-06
Authors: Tseng, T.-S., Chen, C.
PDB entry 5x3m: crystal structure of p-Ub-S65-NH2
Classification: PROTEIN BINDING
Experimental method: X-RAY DIFFRACTION
Resolution: 1.818 Å
Deposited: 2017-02-06
Authors: Man, P., Shuai, G., Qian, Q., Lei, L.
PDB entry 5x3n: Crystal structure of DiUb-K6
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.649 Å
Deposited: 2017-02-06
Authors: Man, P., Shuai, G., Qian, Q., Lei, L.
PDB entry 5x3o: Crystal structure of p-DiUb-S65-COOH
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.194 Å
Deposited: 2017-02-06
Authors: Man, P., Shuai, G., Qian, Q., Lei, L.
PDB entry 5x3p: Crystal structure of the UBX domain of human UBXD7
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.999 Å
Deposited: 2017-02-06
Authors: Jiang, T., Li, Z., Wang, Y., Xu, M.
PDB entry 5x3r: Crystal structure of the SmcR complexed with QStatin
Classification: DNA BINDING PROTEIN
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-02-07
Authors: Jang, S.Y., Hwang, J., Kim, M.H.
PDB entry 5x3s: Crystal structure of mouse Plk1-PBD in complex with phosphopeptide from HEF1 (799-809)
Classification: TRANSFERASE/PEPTIDE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.899 Å
Deposited: 2017-02-07
Authors: Kim, J.H., Shin, S.C., Kim, E.E.
PDB entry 5x3t: VapBC from Mycobacterium tuberculosis
Classification: ANTITOXIN/TOXIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2017-02-07
Authors: Kang, S.M., Kim, D.H., Yoon, H.J., Lee, B.J.
PDB entry 5x3v: Structure of human SHMT2 protein mutant
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2017-02-09
Authors: Li, J., Sheng, J.
PDB entry 5x3x: 2.8A resolution structure of a cobalt energy-coupling factor transporter-CbiMQO
Classification: TRANSPORT PROTEIN
Source organism: Rhodobacter capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.788 Å
Deposited: 2017-02-09
Authors: Bao, Z., Qi, X., Wang, J., Zhang, P.
PDB entry 5x3y: Refined solution structure of musashi1 RBD2
Classification: RNA BINDING PROTEIN
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2017-02-09
Authors: Iwaoka, R., Nagata, T., Tsuda, K., Imai, T., Okano, H., Kobayashi, N., Katahira, M.
PDB entry 5x3z: Solution structure of musashi1 RBD2 in complex with RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2017-02-09
Authors: Iwaoka, R., Nagata, T., Tsuda, K., Imai, T., Okano, H., Kobayashi, N., Katahira, M.
PDB entry 5x40: Structure of a CbiO dimer bound with AMPPCP
Classification: TRANSPORT PROTEIN
Source organism: Rhodobacter capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2017-02-09
Authors: Bao, Z., Qi, X., Wang, J., Zhang, P.
PDB entry 5x41: 3.5A resolution structure of a cobalt energy-coupling factor transporter using LCP method-CbiMQO
Classification: TRANSPORT PROTEIN
Source organism: Rhodobacter capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.47 Å
Deposited: 2017-02-09
Authors: Bao, Z., Qi, X., Zhao, W., Li, D., Zhang, P.
PDB entry 5x42: Structure of DotL(590-659)-DotN derived from Legionella pneumophila
Classification: PROTEIN TRANSPORT
Source organism: Legionella pneumophila; Legionella pneumophila subsp. pneumophila; Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-02-09
Authors: Kwak, M.J., Kim, J.D., Oh, B.H.
PDB entry 5x45: Crystal structure of 2A protease from Human rhinovirus C15
Classification: VIRAL PROTEIN
Source organism: Rhinovirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 2.602 Å
Deposited: 2017-02-10
Authors: Ling, H., Yang, P., Shaw, N., Sun, Y., Wang, X.
PDB entry 5x47: Crystal structure of dehydroquinate dehydratase from Acinetobacter baumannii at 2.5 Angstrom resolution
Classification: LYASE
Source organism: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2017-02-10
Authors: Iqbal, N., Singh, P.K., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 5x49: Crystal Structure of Human mitochondrial X-prolyl Aminopeptidase (XPNPEP3)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2017-02-10
Authors: Singh, R., Kumar, A., Ghosh, B., Jamdar, S., Makde, R.D.
PDB entry 5x4a: SLL-2-Forssman antigen tetrasaccharides complex
Classification: SUGAR BINDING PROTEIN
Source organism: Sinularia lochmodes
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2017-02-11
Authors: Kita, A., Miki, K.
PDB entry 5x4b: Crystal Structure of N-terminal G-domain of EngA from Bacillus subtilis
Classification: HYDROLASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-02-11
Authors: Singh, V., Prakash, B.
PDB entry 5x4f: Solution Structure of the N-terminal Domain of TDP-43
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2017-02-13
Authors: Jiang, L.-L., Xue, W., Hu, H.-Y.
PDB entry 5x4g: Crystal structure of Fab fragment of anti-CD147 monoclonal antibody 6H8
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2017-02-13
Authors: Lin, P., Zhang, M.-Y., Chen, X., Ye, S., Yu, X.-L., Zhang, R.-G., Zhu, P., Chen, Z.-N.
PDB entry 5x4h: The crystal structure of Pyrococcus furiosus RecJ (wild-type)
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.801 Å
Deposited: 2017-02-13
Authors: Li, M.J., Yi, G.S., Yu, F., Zhou, H., Chen, J.N., Xu, C.Y., Wang, F.P., Xiao, X., He, J.H., Liu, X.P.
PDB entry 5x4i: Pyrococcus furiosus RecJ (D83A, Mn-soaking)
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.092 Å
Deposited: 2017-02-13
Authors: Li, M.J., Yi, G.S., Yu, F., Zhou, H., Chen, J.N., Xu, C.Y., Wang, F.P., Xiao, X., He, J.H., Liu, X.P.