LiteFold/PDB huggingface dataset:
PDB entry 8bfp: Jumbo Phage phi-kp24 empty capsid pentamer hexamers
Classification: VIRUS
Source organism: Klebsiella phage vB_KpM_FBKp24
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-10-26
Authors: Ouyang, R.
PDB entry 8bfq: Structure of the apo form of Mpro from SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.863 Å
Deposited: 2022-10-26
Authors: Medrano, F.J., Romero, A.
PDB entry 8bfr: The E. coli TrpD2 protein YbiB at 1.3 A resolution
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-10-26
Authors: Deckers, B., Galicia, C., Versees, W.
PDB entry 8bfs: Crystal structure of human calmodulin-dependent protein kinase 1D (CAMK1D) in complex with FZ326
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-10-26
Authors: Kraemer, A., Zhu, W.F., Hernandez-Olmos, V., Proschak, E., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8bft: The E. coli TrpD2 protein YbiB in complex with a C-terminal peptide from ObgE
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2022-10-26
Authors: Deckers, B., Galicia, C., Versees, W.
PDB entry 8bfu: Crystal structure of the apo p110alpha catalytic subunit from homo sapiens
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2022-10-26
Authors: Gong, G.Q., Bellini, D., Vanhaesebroeck, B., Williams, R.L.
PDB entry 8bfw: The structures of Ace2 in complex with bicyclic peptide inhibitor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2022-10-27
Authors: Brear, P., Lulla, A., Harman, M., Dods, R., Chen, L., Bezerra, G., Demydchuk, Y., Stanway, S., Hyvonen, M.
PDB entry 8bfy: ABC transporter binding protein CebE from Streptomyces scabiei in complex with cellotriose
Classification: CARBOHYDRATE
Source organism: Streptomyces scabiei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-10-27
Authors: Rigali, S., Jourdan, S., Kerff, F.
PDB entry 8bfz: Amyloid-beta 42 filaments extracted from the human brain with Arctic mutation (E22G) of Alzheimer's disease | ABeta42
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-10-27
Authors: Yang, Y., Zhang, W.J., Murzin, A.G., Schweighauser, M., Huang, M., Lovestam, S.K.A., Peak-Chew, S.Y., Macdonald, J., Lavenir, I., Ghetti, B., Graff, C., Kumar, A., Nordberg, A., Goedert, M., Scheres, S.H.W.
PDB entry 8bg0: Amyloid-beta tetrameric filaments with the Arctic mutation (E22G) from Alzheimer's disease brains | ABeta40
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.99 Å
Deposited: 2022-10-27
Authors: Yang, Y., Zhang, W.J., Murzin, A.G., Schweighauser, M., Huang, M., Lovestam, S.K.A., Peak-Chew, S.Y., Macdonald, J., Lavenir, I., Ghetti, B., Graff, C., Kumar, A., Nordber, A., Goedert, M., Scheres, S.H.W.
PDB entry 8bg1: Crystal structure of the SARS-CoV-2 S RBD in complex with pT1511 scFV
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2022-10-27
Authors: Hansen, G., Ssebyatika, G.L., Krey, T.
PDB entry 8bg2: Crystal structure of the SARS-CoV-2 S RBD in complex with pT1580 scFV
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-10-27
Authors: Hansen, G., Ssebyatika, G.L., Krey, T.
PDB entry 8bg3: Crystal structure of the SARS-CoV-2 S RBD in complex with pT1610 scFV
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-27
Authors: Hansen, G., Ssebyatika, G.L., Krey, T.
PDB entry 8bg4: Crystal structure of the SARS-CoV-2 S RBD in complex with pT1611 scFV
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-27
Authors: Hansen, G., Ssebyatika, G.L., Krey, T.
PDB entry 8bg5: Crystal structure of the SARS-CoV-2 S RBD in complex with pT1631 scFV
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-10-27
Authors: Hansen, G., Ssebyatika, G.L., Krey, T.
PDB entry 8bg6: SARS-CoV-2 S protein in complex with pT1644 Fab
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.11 Å
Deposited: 2022-10-27
Authors: Stroeh, L., Hansen, G., Vollmer, B., Krey, T., Benecke, T., Gruenewald, K.
PDB entry 8bg8: SARS-CoV-2 S protein in complex with pT1696 Fab
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2022-10-27
Authors: Hansen, G., Benecke, T., Vollmer, B., Gruenewald, K., Krey, T.
PDB entry 8bg9: Murine amyloid-beta filaments with the Arctic mutation (E22G) from APP(NL-G-F) mouse brains | ABeta
Classification: PROTEIN FIBRIL
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-10-27
Authors: Yang, Y., Zhang, W.J., Murzin, A.G., Schweighauser, M., Huang, M., Lovestam, S.K.A., Peak-Chew, S.Y., Macdonald, J., Lavenir, I., Ghetti, B., Graff, C., Kumar, A., Nordber, A., Goedert, M., Scheres, S.H.W.
PDB entry 8bga: Structure of Mpro in complex with FGA146
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.982 Å
Deposited: 2022-10-27
Authors: Medrano, F.J., Romero, A.
PDB entry 8bgb: Structure of the citrate-bound extracytoplasmic PAS domain of histidine kinase CitA from Geobacillus thermodenitrificans
Classification: SIGNALING PROTEIN
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-10-27
Authors: Becker, S.
PDB entry 8bgc: Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with compound 2 (AA-CS-9-003)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-10-27
Authors: Kraemer, A., Axtman, A.D., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8bgd: Structure of Mpro from SARS-CoV-2 in complex with FGA147
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.621 Å
Deposited: 2022-10-27
Authors: Medrano, F.J., Romero, A.
PDB entry 8bge: Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.11 Å
Deposited: 2022-10-27
Authors: Koziej, L., Glatt, S.
PDB entry 8bgf: NMR solution structure of the N-terminal RRM and flanking linker regions of Polypyrimidine tract binding protein 1 using the CYANA CONSENSUS method.
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-10-27
Authors: Damberger, F.D., Beusch, I., Allain, F.H.-T.
PDB entry 8bgg: Cryo-EM structure of SARS-CoV-2 spike (Omicron BA.1 variant) in complex with nanobody W25 (map 5, focus refinement on RBD, W25 and adjacent NTD)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.04 Å
Deposited: 2022-10-27
Authors: Modhiran, N., Lauer, S., Spahn, C.M.T., Watterson, D., Schwefel, D.
PDB entry 8bgh: Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2022-10-27
Authors: Koziej, L., Glatt, S.
PDB entry 8bgi: GABA-A receptor a5 homomer - a5V1 - Flumazenil
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2022-10-27
Authors: Miller, P.S., Malinauskas, T.M., Omari, K.E., Aricescu, A.R.
PDB entry 8bgj: Crystal structure of Reverse Transcriptase domain from Caloramator australicus CART-CAPP
Classification: TRANSFERASE
Source organism: Caloramator australicus RC3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-10-27
Authors: Li, A.W.H., Doherty, A.J.
PDB entry 8bgk: NMR Structure of Big-defensin 5 from oyster Crassostrea gigas
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-10-27
Authors: Loth, K., Asokan, A.
PDB entry 8bgl: Structure of the dimeric rsCherryRev1.4
Classification: FLUORESCENT PROTEIN
Source organism: Discosoma sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-28
Authors: Bui, T.Y.H., Van Meervelt, L.
PDB entry 8bgm: Crystal structure of the OrfX1-OrfX3 complex from the PMP1 neurotoxin gene cluster
Classification: TOXIN
Source organism: Paraclostridium bifermentans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-10-28
Authors: Kosenina, S., Stenmark, P.
PDB entry 8bgn: N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus
Classification: HYDROLASE
Source organism: Thermococcus chitonophagus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2022-10-28
Authors: Rypniewski, W., Bejger, M., Biniek-Antosiak, K.
PDB entry 8bgo: N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus with substrate N,N-diacetylchitobiose
Classification: HYDROLASE
Source organism: Thermococcus chitonophagus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2022-10-28
Authors: Rypniewski, W., Bejger, M., Biniek-Antosiak, K.
PDB entry 8bgp: N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus anomalous data
Classification: HYDROLASE
Source organism: Thermococcus chitonophagus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2022-10-28
Authors: Rypniewski, W., Biniek-Antosiak, K., Bejger, M.
PDB entry 8bgr: FAD-independent Methylene-Tetrahydrofolate Reductase from Mycobacterium hassiacum
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium hassiacum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-28
Authors: Gehl, M., Ermler, U., Shima, S.
PDB entry 8bgs: Tau Paired Helical Filament from Extracellular Vesicles from Alzheimer's disease brain
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2022-10-28
Authors: Behr, T.S., Ryskeldi-Falcon, B.
PDB entry 8bgt: O-Methyltransferase Plu4890 in complex with SAM
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-28
Authors: Huber, E.M., Groll, M.
PDB entry 8bgu: human MDM2-5S RNP
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-10-28
Authors: Castillo, N., Thoms, M., Flemming, D., Hammaren, H.M., Buschauer, R., Ameismeier, M., Bassler, J., Beck, M., Beckmann, R., Hurt, E.
PDB entry 8bgv: Tau Paired Helical Filament from Cellular Fraction of Alzheimer's disease brain
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2022-10-28
Authors: Behr, T.S., Ryskeldi-Falcon, B.
PDB entry 8bgw: CryoEM structure of quinol-dependent Nitric Oxide Reductase (qNOR) from Alcaligenes xylosoxidans at 2.2 A resolution
Classification: MEMBRANE PROTEIN
Source organism: Achromobacter xylosoxidans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2022-10-28
Authors: Flynn, A., Antonyuk, S.V., Eady, R.R., Muench, S.P., Hasnain, S.S.
PDB entry 8bgx: O-Methyltransferase Plu4890 in complex with SAH and AQ-270a
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-28
Authors: Huber, E.M., Groll, M.
PDB entry 8bgy: O-Methyltransferase Plu4890 in complex with SAH and AQ-284a
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-10-28
Authors: Huber, E.M., Groll, M.
PDB entry 8bgz: O-Methyltransferase Plu4890 (mutant H229N) in complex with SAH and AQ-256
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-28
Authors: Huber, E.M., Groll, M.
PDB entry 8bh0: O-Methyltransferase Plu4890 in complex with SAH and AQ-270b
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-10-28
Authors: Huber, E.M., Groll, M.
PDB entry 8bh1: Core divisome complex FtsWIQBL from Pseudomonas aeruginosa
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-10-28
Authors: Kaeshammer, L., van den Ent, F., Jeffery, M., Lowe, J.
PDB entry 8bh3: DNA-PK Ku80 mediated dimer bound to PAXX
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.55 Å
Deposited: 2022-10-28
Authors: Hardwick, S.W., Chaplin, A.K.
PDB entry 8bh4: Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2022-10-29
Authors: Koziej, L., Glatt, S.
PDB entry 8bh5: SARS-CoV-2 BA.2.12.1 RBD in complex with Beta-27 Fab and C1 nanobody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-10-29
Authors: Huo, J., Zhou, D., Ren, J., Stuart, D.I.
PDB entry 8bh6: Mature 30S ribosomal subunit from Staphylococcus aureus
Classification: TRANSLATION
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-10-30
Authors: Garaeva, N., Fatkhullin, B., Jenner, L., Soufari, H., Yusupov, M., Usachev, K.
PDB entry 8bh7: The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus
Classification: TRANSLATION
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.23 Å
Deposited: 2022-10-30
Authors: Garaeva, N., Fatkhullin, B., Jenner, L., Soufari, H., Yusupov, M., Usachev, K.
PDB entry 8bh8: Structure of Est1 from Candida Tropicalis in complex with TLC1 telomerase RNA fragment 444-456
Classification: RNA BINDING PROTEIN
Source organism: Candida tropicalis MYA-3404; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2022-10-30
Authors: Rety, S., Chen, W.F., Xi, X.G.
PDB entry 8bh9: Structure of Est1 from Candida Tropicalis in complex with TLC1 telomerase RNA fragment 427-435 / 496-504
Classification: RNA BINDING PROTEIN
Source organism: Candida tropicalis MYA-3404; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-10-30
Authors: Rety, S., Chen, W.F., Xi, X.G.
PDB entry 8bha: GABA-A receptor a5 homomer - a5V3 - Basmisanil - HR
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2022-10-30
Authors: Malinauskas, T.M., Wahid, A.A., Hardwick, S.W., Chirgadze, D.Y., Miller, P.S.
PDB entry 8bhb: GABA-A receptor a5 homomer - a5V3 - RO154513
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2022-10-30
Authors: Miller, P.S., Malinauskas, T.M., Hardwick, S.W., Chirgadze, D.Y., Wahid, A.A.
PDB entry 8bhc: K141H and S142H double mutant of hGSTA1-1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-10-31
Authors: Papageorgiou, A.C., Poudel, N.
PDB entry 8bhd: N-terminal domain of Plasmodium berghei glutamyl-tRNA synthetase (Tbxo4 derivative crystal structure)
Classification: RNA BINDING PROTEIN
Source organism: Plasmodium berghei ANKA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.17 Å
Deposited: 2022-10-31
Authors: Benas, P., Jaramillo Ponce, J.R., Legrand, P., Frugier, M., Sauter, C.
PDB entry 8bhe: K141H and S142H double mutant of hGSTA1-1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2022-10-31
Authors: Papageorgiou, A.C., Poudel, N.
PDB entry 8bhf: Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-31
Authors: Absmeier, E., Chandrasekaran, V., O'Reilly, F.J., Stowell, J.A.W., Rappsilber, J., Passmore, L.A.
PDB entry 8bhg: GABA-A receptor a5 heteromer - a5V2 - Bretazenil
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2022-10-31
Authors: Miller, P.S., Malinauskas, T.M., Omari, K.E., Aricescu, A.R.
PDB entry 8bhh: The crystal structure of a feruloyl esterase C from Fusarium oxysporum in complex with p-coumaric acid
Classification: HYDROLASE
Source organism: Fusarium oxysporum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-10-31
Authors: Dimarogona, M., Topakas, E., Kosinas, C., Ferousi, C., Nikolaivits, E.
PDB entry 8bhi: GABA-A receptor a5 homomer - a5V3 - RO5211223
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2022-10-31
Authors: Miller, P.S., Malinauskas, T.M., Hardwick, S.W., Chirgadze, D.Y.
PDB entry 8bhj: Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2022-10-31
Authors: Koziej, L., Glatt, S.
PDB entry 8bhk: GABA-A receptor a5 homomer - a5V3 - Diazepam
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-10-31
Authors: Miller, P.S., Malinauskas, T.M., Kasaragod, V.B., Chirgadze, D.Y.
PDB entry 8bhl: Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2022-10-31
Authors: Koziej, L., Glatt, S.
PDB entry 8bhm: GABA-A receptor a5 homomer - a5V3 - DMCM
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2022-10-31
Authors: Miller, P.S., Malinauskas, T.M., Hardwick, S.W., Chirgadze, D.Y.
PDB entry 8bhn: Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2022-10-31
Authors: Koziej, L., Glatt, S.
PDB entry 8bho: GABA-A receptor a5 homomer - a5V3 - L655708
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2022-10-31
Authors: Miller, P.S., Malinauskas, T.M., Hardwick, S.W., Chirgadze, D.Y.
PDB entry 8bhp: Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2022-10-31
Authors: Koziej, L., Glatt, S.
PDB entry 8bhq: GABA-A receptor a5 homomer - a5V3 - RO7172670
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-10-31
Authors: Miller, P.S., Malinauskas, T.M., Hardwick, S.W., Kasaragod, V.B.
PDB entry 8bhr: GABA-A receptor a5 homomer - a5V3 - RO7015738
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2022-10-31
Authors: Miller, P.S., Malinauskas, T.M., Kasaragod, V.B.
PDB entry 8bhs: GABA-A receptor a5 homomer - a5V3 - RO4938581
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2022-10-31
Authors: Miller, P.S., Malinauskas, T.M., Hardwick, S.W., Chirgadze, D.Y.
PDB entry 8bht: ABCG2 turnover-1 state with tariquidar bound
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-31
Authors: Yu, Q., Kowal, J., Tajkhorshid, E., Locher, K.P.
PDB entry 8bhu: Crystal Structure of SilF (Ag(I) form
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-01
Authors: Lithgo, R.M., Carr, S.B., Quigley, A.M., Scott, D.J.
PDB entry 8bhv: DNA-PK XLF mediated dimer bound to PAXX
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.51 Å
Deposited: 2022-11-01
Authors: Hardwick, S.W., Chaplin, A.K.
PDB entry 8bhw: Full-length bacterial polysaccharide co-polymerase WzzE from E. coli. C4 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-01
Authors: Wiseman, B., Hogbom, M.
PDB entry 8bhx: High resolution structure of the iron Superoxide Dismutase from Thermobifida fusca
Classification: ELECTRON TRANSPORT
Source organism: Thermobifida fusca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-11-01
Authors: Leiros, H.-K.S., Sorlie, M.
PDB entry 8bhy: DNA-PK Ku80 mediated dimer bound to PAXX and XLF
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.33 Å
Deposited: 2022-11-01
Authors: Hardwick, S.W., Chaplin, A.K.
PDB entry 8bhz: The apo-crystal structure of a variant form of the 28-kDa Schistosoma bovis glutathione transferase in orthorhombic form
Classification: TRANSFERASE
Source organism: Schistosoma bovis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-01
Authors: Pandian, R., Mfeka, S.M., Onisuru, O., Sayed, Y., Achilonu, I.A.
PDB entry 8bi0: ABCG2 turnover-2 state with tariquidar bound
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-01
Authors: Yu, Q., Kowal, J., Tajkhorshid, E., Locher, K.P.
PDB entry 8bi2: Syk kinase domain in complex with macrocyclic inhibitor 20a
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.508 Å
Deposited: 2022-11-01
Authors: Read, J.A., Patel, J.
PDB entry 8bi3: Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200W (crystal M200W#1)
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.452 Å
Deposited: 2022-11-01
Authors: Sciuk, A., Ruszkowski, M., Jaskolski, M., Loch, J.I.
PDB entry 8bi4: Helical shell of CCMV capsid protein on DNA origami 6HB-2k
Classification: VIRUS LIKE PARTICLE
Source organism: Cowpea chlorotic mottle virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2022-11-01
Authors: Kumpula, E.-P., Seitz, I., Kostiainen, M.A., Huiskonen, J.T.
PDB entry 8bi5: Crystal structure of human Choline Kinase A in complex with UNC0737
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-11-01
Authors: Diaz-Saez, L., Ward, J., Kennedy, E., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Huber, K., Structural Genomics Consortium (SGC)
PDB entry 8bi6: Crystal structure of human Choline Kinase A in complex with UNC0638
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-01
Authors: Diaz-Saez, L., Ward, J., Kennedy, E., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Huber, K., Structural Genomics Consortium (SGC)
PDB entry 8bi7: Binary structure of 14-3-3s and PKR phosphopeptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-01
Authors: Somsen, B.A., Ottmann, C.
PDB entry 8bi8: Structure of a cyclic beta-hairpin peptide derived from neuronal nitric oxide synthase
Classification: PROTEIN BINDING
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2022-11-01
Authors: Balboa, J.R., Ostergaard, S., Stromgaard, K., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8bi9: Structure of a cyclic beta-hairpin peptide derived from neuronal nitric oxide synthase (T112W/T116E variant)
Classification: PROTEIN BINDING
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2022-11-01
Authors: Balboa, J.R., Ostergaard, S., Stromgaard, K., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8bia: Crystal structure of Scribble PDZ1 with PTHR
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-02
Authors: Stewart, B.Z., Kvansakul, M.
PDB entry 8bib: O-Methyltransferase Plu4890 in complex with SAH and AQ-256
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8bic: O-Methyltransferase Plu4891 in complex with SAH
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8bid: O-Methyltransferase Plu4890 (mutant H229N) in complex with SAH and AQ-270a
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8bie: O-Methyltransferase Plu4894 in complex with SAH
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8bif: O-Methyltransferase Plu4892 in complex with SAH
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8big: O-Methyltransferase Plu4895 in complex with SAH
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8bih: O-Methyltransferase Plu4890 in complex with SAH and AQ-284b
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8bii: O-Methyltransferase Plu4895 (mutant H229N) in complex with SAH
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8bij: O-Methyltransferase Plu4894 (mutant I88M, W91L, C97Y, S142L, G146V, Y258M, L270F, S309Y) in complex with SAH
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8bik: Crystal structure of human AMPK heterotrimer in complex with allosteric activator C455
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-11-02
Authors: Schimpl, M., Mather, K.M., Boland, M.L., Rivers, E.L., Srivastava, A., Hemsley, P., Robinson, J., Wan, P.T., Hansen, J., Read, J.A., Trevaskis, J.L., Smith, D.M.
PDB entry 8bil: Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.04 Å
Deposited: 2022-11-02
Authors: Koziej, L., Glatt, S.
PDB entry 8bim: Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.04 Å
Deposited: 2022-11-02
Authors: Koziej, L., Glatt, S.
PDB entry 8bin: Crystal structure of human Ephrin type-A receptor 2 (EPHA2) Kinase domain in complex with MR21
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-11-02
Authors: Zhubi, R., Rak, M., Knapp, S., Kraemer, A., Structural Genomics Consortium (SGC)
PDB entry 8bio: Crystal structure of human Ephrin type-A receptor 2 (EPHA2) Kinase domain in complex with MRAL5
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-11-02
Authors: Zhubi, R., Rak, M., Lucic, A., Knapp, S., Kraemer, A., Structural Genomics Consortium (SGC)
PDB entry 8bip: Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-11-02
Authors: Knorr, A.G., Mackens-Kiani, T., Musial, J., Berninghausen, O., Becker, T., Beatrix, B., Beckmann, R.
PDB entry 8biq: Crystal structure of acyl-COA synthetase from Metallosphaera sedula in complex with acetyl-AMP
Classification: LIGASE
Source organism: Metallosphaera sedula DSM 5348
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-11-02
Authors: Capra, N., Thunnissen, A.M.W.H., Janssen, D.B.
PDB entry 8bir: O-Methyltransferase Plu4895 in complex with SAH and AQ-256
Classification: TRANSFERASE
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-02
Authors: Huber, E.M., Groll, M.
PDB entry 8bis: Crystal structure of cystathionine gamma-lyase from Toxoplasma gondii in complex with DL-propargylglycine
Classification: CYTOSOLIC PROTEIN
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.266 Å
Deposited: 2022-11-02
Authors: Fernandez-Rodriguez, C., Conter, C., Oyenarte, I., Favretto, F., Quintana, I., Martinez-Chantar, M.L., Astegno, A., Martinez-Cruz, L.A.
PDB entry 8bit: Crystal structure of acyl-CoA synthetase from Metallosphaera sedula in complex with Coenzyme A and acetyl-AMP
Classification: LIGASE
Source organism: Metallosphaera sedula DSM 5348
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-11-02
Authors: Capra, N., Thunnissen, A.M.W.H., Janssen, D.B.
PDB entry 8biu: Cystathionine gamma-lyase in complex with cystathionine
Classification: CYTOSOLIC PROTEIN
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.899 Å
Deposited: 2022-11-02
Authors: Fernandez-Rodriguez, C., Conter, C., Oyenarte, I., Favretto, F., Quintana, I., Martinez-Chantar, M.L., Astegno, A., Martinez-Cruz, L.A.
PDB entry 8biv: Cystathionine gamma-lyase N360S mutant from Toxoplasma gondii
Classification: CYTOSOLIC PROTEIN
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-11-02
Authors: Fernandez-Rodriguez, C., Conter, C., Oyenarte, I., Favretto, F., Quintana, I., Martinez-Chantar, M.L., Astegno, A., Martinez-Cruz, L.A.
PDB entry 8biw: Cystathionine gamma-lyase N360S mutant in complex with DL-propargylglycine
Classification: CYTOSOLIC PROTEIN
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.981 Å
Deposited: 2022-11-02
Authors: Fernandez-Rodriguez, C., Conter, C., Oyenarte, I., Favretto, F., Quintana, I., Martinez-Chantar, M.L., Astegno, A., Martinez-Cruz, L.A.
PDB entry 8bix: Cystathionine gamma-lyase N360S mutant from Toxoplasma gondii in complex with cystathionine
Classification: CYTOSOLIC PROTEIN
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2022-11-02
Authors: Fernandez-Rodriguez, C., Conter, C., Oyenarte, I., Favretto, F., Quintana, I., Martinez-Chantar, M.L., Astegno, A., Martinez-Cruz, L.A.
PDB entry 8biy: Citrate-free extracytoplasmic PAS domain mutant R93A of sensor histidine kinase CitA from Geobacillus thermodenitrificans
Classification: SIGNALING PROTEIN
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2022-11-02
Authors: Becker, S.
PDB entry 8biz: Cystathionine gamma-lyase from Toxoplasma gondii in complex with cysteine
Classification: CYTOSOLIC PROTEIN
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.891 Å
Deposited: 2022-11-02
Authors: Fernandez-Rodriguez, C., Conter, C., Oyenarte, I., Favretto, F., Quintana, I., Martinez-Chantar, M.L., Astegno, A., Martinez-Cruz, L.A.
PDB entry 8bj0: Crystal structure of Scribble PDZ1 with PTHR
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-11-03
Authors: Stewart, B.Z., Kvansakul, M.
PDB entry 8bj1: Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in the open state
Classification: TRANSFERASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-11-03
Authors: Rutkiewicz, M., Ruszkowski, M.
PDB entry 8bj2: Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in the closed state
Classification: TRANSFERASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-03
Authors: Rutkiewicz, M., Ruszkowski, M.
PDB entry 8bj3: Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in complex with histidinol-phosphate
Classification: TRANSFERASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2022-11-03
Authors: Rutkiewicz, M., Ruszkowski, M.
PDB entry 8bj4: Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in apo form
Classification: TRANSFERASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-11-03
Authors: Rutkiewicz, M., Witek, W., Ruszkowski, M.
PDB entry 8bj5: Imine Reductase IR007 from Amycolatopsis azurea
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis azurea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2022-11-03
Authors: Gilio, A.K., Steflik, J., Grogan, G.
PDB entry 8bj6: Crystal structure of YopR
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-11-03
Authors: Gallego del Sol, F., Marina, A.
PDB entry 8bj7: Nitratidesulfovibrio vulgaris FeFe Hydrogenase C178A mutant in Hinact-like state
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2022-11-03
Authors: Bikbaev, K., Span, I.
PDB entry 8bj8: Nitratidesulfovibrio vulgaris FeFe Hydrogenase C178A mutant in Htrans-like state
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2022-11-03
Authors: Bikbaev, K., Span, I.
PDB entry 8bj9: X-ray structure of the CeuE Homologue from Parageobacillus thermoglucosidasius - 5LICAM complex.
Classification: METAL TRANSPORT
Source organism: Parageobacillus thermoglucosidasius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.069 Å
Deposited: 2022-11-03
Authors: Blagova, E.V., Bennett, M., Booth, R., Dodson, E.J., Duhme-KLair, A.-K., Wilson, K.S.
PDB entry 8bja: Structure of the human UBR5 Dimer.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-03
Authors: Hodakova, Z., Grishkovskaya, I., Haselbach, D.
PDB entry 8bjc: Full length structure of the apo-state LpMIP.
Classification: STRUCTURAL PROTEIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2022-11-03
Authors: Whittaker, J.J., Guskov, A., Goretzki, B., Hellmich, U.A.
PDB entry 8bjd: Full length structure of LpMIP with bound inhibitor JK095
Classification: STRUCTURAL PROTEIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-04
Authors: Whittaker, J.J., Guskov, A., Goretzki, B., Hellmich, U.A.
PDB entry 8bje: A structure of the truncated LpMIP with bound inhibitor JK236.
Classification: STRUCTURAL PROTEIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-11-04
Authors: Whittaker, J.J., Guskov, A., Goretzki, B., Hellmich, U.A.
PDB entry 8bjf: Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (inward-facing conformation)
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-04
Authors: Raj, I., Bloch, M., Pape, T.H., Taylor, N.M.I.
PDB entry 8bjg: Ternary structure of 14-3-3s, ERRg phosphopeptide and dual-reactive compound 8
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-04
Authors: Somsen, B.A., Ottmann, C.
PDB entry 8bjh: chimera of the inactive ExoY Nucleotidyl Cyclase domain from Vibrio nigripulchritudo MARTX toxin, with the double mutation K3528M and K3535I, fused to a proline-Rich-Domain (PRD) and profilin, bound to Latrunculin B-ADP-Mg-actin
Classification: TOXIN
Source organism: Homo sapiens; Oryctolagus cuniculus; Vibrio nigripulchritudo
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-11-04
Authors: Teixeira-Nunes, M., Renault, L., Retailleau, P.
PDB entry 8bji: chimera of ExoY Nucleotidyl Cyclase domain from Vibrio nigripulchritudo fused to a proline-Rich-Domain (PRD) and profilin, bound to ADP-Mg-actin and a sulfate ion
Classification: TOXIN
Source organism: Homo sapiens; Oryctolagus cuniculus; Vibrio nigripulchritudo
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-11-04
Authors: Teixeira-Nunes, M., Renault, L., Retailleau, P.
PDB entry 8bjj: ExoY Nucleotidyl Cyclase domain from Vibrio nigripulchritudo MARTX toxin, bound to ATP-Mg-actin, human profilin 1 and a sulfate ion
Classification: TOXIN
Source organism: Homo sapiens; Oryctolagus cuniculus; Vibrio nigripulchritudo
Experimental method: X-RAY DIFFRACTION
Resolution: 1.699 Å
Deposited: 2022-11-04
Authors: Teixeira-Nunes, M., Renault, L., Retailleau, P.
PDB entry 8bjk: X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with an inhibitor CPD11352
Classification: HYDROLASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-11-04
Authors: Barinka, C., Motlova, L., Pavlicek, J.
PDB entry 8bjl: Human Aldose Reductase in Complex with a Ligand with a Fluoro-Indol-Acetic-Acid Structure (Schl44172)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2022-11-04
Authors: Hubert, L.-S., Heine, A., Klebe, G.
PDB entry 8bjm: Human full length RAD52 undecamer.
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2022-11-04
Authors: Marotta, R., Balboni, B., Girotto, S., Cavalli, A.
PDB entry 8bjn: Ternary structure of 14-3-3s, ERRg phosphopeptide and dual-reactive compound 6
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-04
Authors: Somsen, B.A., Ottmann, C.
PDB entry 8bjo: Crystal structure of Paradendryphiella salina PL7C alginate lyase mutant Y220F in complex with hexa-mannuronic acid
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2022-11-04
Authors: Wilkens, C., Morth, J.P.
PDB entry 8bjp: The N288D mutant cytoplasmic PAS domain of Geobacillus thermodenitrificans histidine kinase CitA
Classification: SIGNALING PROTEIN
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-04
Authors: Becker, S.
PDB entry 8bjq: Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-11-05
Authors: Knorr, A.G., Mackens-Kiani, T., Musial, J., Berninghausen, O., Becker, T., Beatrix, B., Beckmann, R.
PDB entry 8bjr: Crystal structure of Paradendryphiella salina PL7C alginate lyase
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-11-06
Authors: Fredslund, F., Welner, D.H., Wilkens, C.
PDB entry 8bjs: Apo KIF20A[55-510] crystal structure
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2022-11-06
Authors: Ranaivoson, F.M., Kikuti, C., Crozet, V., Sirkia, M.E., Houdusse, A.
PDB entry 8bjt: Structure of human PLK1 in complex with 2-Allyl-1-[6-(1-hydroxy-1-methyl-ethyl)-pyridin-2-yl]-6-[4-(4-methyl-piperazin-1-yl)-phenylamino]-1,2-dihydro-pyrazolo[3,4-d]pyrimidin-3-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.188 Å
Deposited: 2022-11-06
Authors: Musil, D., Liu-Bujalski, L.
PDB entry 8bju: HUMAN WEE1 KINASE IN COMPLEX WITH INHIBITOR 1-[6-(1-Hydroxy-1-methyl-ethyl)-pyridin-2-yl]-2-(2-methoxy-phenyl)-6-[4-(4-methyl-piperazin-1-yl)-phenylamino]-1,2-dihydro-pyrazolo[3,4-d]pyrimidin-3-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2022-11-06
Authors: Musil, D., Lan, R.
PDB entry 8bjv: Crystal structure of YopR
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-11-08
Authors: Gallego del Sol, F., Marina, A.
PDB entry 8bjw: Structure of Tupaia Paramyxovirus C protein
Classification: VIRAL PROTEIN
Source organism: Tupaia paramyxovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2022-11-08
Authors: Bourhis, J.M., Jamin, M.
PDB entry 8bjx: Crystal structure of human Carbonic anhydrase II in complex with (R)-4-(3-(1-(6-nitropyridin-2-yl)pyrrolidin-3-yl)thioureido)benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.283 Å
Deposited: 2022-11-08
Authors: Angeli, A., Ferraroni, M.
PDB entry 8bjy: Engineered Fructosyl Peptide Oxidase - X02B mutant
Classification: OXIDOREDUCTASE
Source organism: Parastagonospora nodorum SN15
Experimental method: X-RAY DIFFRACTION
Resolution: 1.475 Å
Deposited: 2022-11-08
Authors: Estiri, H., Bhattacharya, S., Rodriguez-Buitrago, J.A., Parisini, E.
PDB entry 8bjz: crystal structure of antibody Fab with SiaLac-amidine-Lys
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-11-08
Authors: Moynie, L., Naismith, J.H.
PDB entry 8bk0: Crystal structure of human Ephrin type-A receptor 2 (EPHA2) Kinase domain in complex with LDN-211904
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-08
Authors: Zhubi, R., Gerninghaus, J., Knapp, S., Kraemer, A., Structural Genomics Consortium (SGC)
PDB entry 8bk1: Mutant Imine Reductase IR007-143 from Amycolatopsis azurea, E120A, M197W, M206S, A213P, D238G, I240L
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis azurea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-08
Authors: Gilio, A.K., Grogan, G.J.
PDB entry 8bk2: X-ray structure of meningococcal factor H binding protein variant 2 in complex with a specific and bactericidal human monoclonal antibody 1B1
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Neisseria meningitidis serogroup B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2022-11-08
Authors: Veggi, D., Bottomley, J.M.
PDB entry 8bk3: Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with diepoxide ketone 1
Classification: ANTIMICROBIAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-11-08
Authors: de Munnik, M., Schofield, C.J.
PDB entry 8bk4: Full length structure of the apo-state LpMIP.
Classification: STRUCTURAL PROTEIN
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2022-11-08
Authors: Whittaker, J.J., Guskov, A., Goretzki, B., Hellmich, U.A.
PDB entry 8bk5: A structure of the truncated LpMIP with bound inhibitor JK095.
Classification: STRUCTURAL PROTEIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2022-11-08
Authors: Whittaker, J.J., Guskov, A., Goretzki, B., Hellmich, U.A.
PDB entry 8bk6: A truncated structure of LpMIP with bound inhibitor JK095.
Classification: STRUCTURAL PROTEIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.263 Å
Deposited: 2022-11-08
Authors: Whittaker, J.J., Guskov, A., Hellmich, A.U., Goretzki, B.
PDB entry 8bk7: Cryo-EM structure of beta-galactosidase at 3.3 A resolution plunged 5 ms after mixing with apoferritin
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-11-08
Authors: Torino, S., Dhurandhar, M., Efremov, R.