LiteFold/PDB huggingface dataset:
PDB entry 7tki: Yeast ATP synthase State 2catalytic(c) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkj: Yeast ATP synthase State 2catalytic(d) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkk: Yeast ATP synthase State 2catalytic(e) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.3 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkl: Yeast ATP synthase State 3binding(a) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.4 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkm: Yeast ATP synthase State 3binding(b) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkn: Yeast ATP synthase State 3binding(c) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tko: Yeast ATP synthase State 3catalytic(a) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkp: Yeast ATP synthase State 3catalytic(b) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkq: Yeast ATP synthase State 3catalytic(c) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkr: Yeast ATP synthase State 3catalytic(d) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tks: Yeast ATP synthase State 3catalytic(e) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkt: SthK closed state, cAMP-bound in the presence of detergent
Classification: TRANSPORT PROTEIN
Source organism: Spirochaeta thermophila DSM 6578
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-01-17
Authors: Rheinberger, J., Schmidpeter, P.A., Nimigean, C.M.
PDB entry 7tku: Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Proliferating Cell Nuclear Antigen PCNA)
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-01-17
Authors: Gaubitz, C., Liu, X., Pajak, J., Stone, N., Hayes, J., Demo, G., Kelch, B.A.
PDB entry 7tkv: Crystal Structure of the Thioredox_DsbH Domain-Containing Uncharacterized Protein Bab1_2064 from Brucella abortus
Classification: UNKNOWN FUNCTION
Source organism: Brucella abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-01-17
Authors: Kim, Y., Crawford, M., Endres, M., Babnigg, G., Crosson, S., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7tkw: Crystal structure of R14A human Galectin-7 mutant
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-01-17
Authors: Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7tkx: Crystal structure of R14A human Galectin-7 mutant in presence of 4-O-beta-D-Galactopyranosyl-D-glucose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-01-17
Authors: Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7tky: Crystal structure of D94A human Galectin-7 mutant
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2022-01-17
Authors: Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7tkz: Crystal structure of D94A human Galectin-7 mutant in presence of lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-01-17
Authors: Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7tl0: Cryo-EM structure of hMPV preF bound by Fabs MPE8 and SAN32-2
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human metapneumovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2022-01-17
Authors: Rush, S.A., Hsieh, C.-L., McLellan, J.S.
PDB entry 7tl1: SARS-CoV-2 Omicron 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-01-18
Authors: Stalls, V., Acharya, P.
PDB entry 7tl2: Crystal Structure of Yeast p58C Multi-Tyrosine Mutant 5YF412
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.529 Å
Deposited: 2022-01-18
Authors: Blee, A.M., Salay, L.E., Chazin, W.J.
PDB entry 7tl3: Crystal Structure of Yeast p58C Multi-Tyrosine Mutant 5YF431
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.066 Å
Deposited: 2022-01-18
Authors: Blee, A.M., Salay, L.E., Chazin, W.J.
PDB entry 7tl4: Crystal Structure of Yeast p58C Multi-Tyrosine Mutant 6YF
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.805 Å
Deposited: 2022-01-18
Authors: Blee, A.M., Salay, L.E., Chazin, W.J.
PDB entry 7tl5: Crystal structure of putative hydrolase yjcS from Klebsiella pneumoniae.
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2022-01-18
Authors: Chang, C., Endres, M., Wu, R., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7tl6: Murine meteorin N-terminal CUB domain
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-01-18
Authors: Quan, C., Arndt, J.W., Pepinsky, B., Gong, B.J., Dolnikova, J.
PDB entry 7tl7: 1.90A resolution structure of independent phosphoglycerate mutase from C. elegans in complex with a macrocyclic peptide inhibitor (Sa-D2)
Classification: ISOMERASE/Inhibitor
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-01-18
Authors: Liu, L., Lovell, S., Battaile, K.P., Dranchak, P., Queme, B., Aitha, M., van Neer, R.H.P., Kimura, H., Katho, T., Suga, H., Inglese, J.
PDB entry 7tl8: 1.95A resolution structure of independent phosphoglycerate mutase from S. aureus in complex with a macrocyclic peptide inhibitor (Sa-D3)
Classification: ISOMERASE/Inhibitor
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-01-18
Authors: Liu, L., Lovell, S., Battaile, K.P., Dranchak, P., Queme, B., Aitha, M., van Neer, R.H.P., Kimura, H., Katho, T., Suga, H., Inglese, J.
PDB entry 7tl9: SARS-CoV-2 Omicron 1-RBD up Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-01-18
Authors: Stalls, V., Acharya, P.
PDB entry 7tla: Down-state locked rS2d SARS-CoV-2 spike ectodomain in the RBD-down conformation, State 1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2022-01-18
Authors: Henderson, R., Acharya, P.
PDB entry 7tlb: Down-state locked rS2d SARS-CoV-2 spike ectodomain in the RBD-down conformation, State 2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2022-01-18
Authors: Henderson, R., Acharya, P.
PDB entry 7tlc: Down-state locked, S2 stabilized rS2d-HexaPro SARS-CoV-2 spike ectodomain in the RBD-down conformation, State 1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2022-01-18
Authors: Henderson, R., Acharya, P.
PDB entry 7tld: Down-state locked, S2 stabilized rS2d-HexaPro SARS-CoV-2 spike ectodomain in the RBD-down conformation, State 2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2022-01-18
Authors: Henderson, R., Acharya, P.
PDB entry 7tle: Crystal Structure of small molecule beta-lactone 1 covalently bound to K-Ras(G12S)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98717 Å
Deposited: 2022-01-18
Authors: Ziyang, Z., Guiley, K.Z., Shokat, K.M.
PDB entry 7tlf: Structure of the photoacclimated Light Harvesting Complex PE545 from Proteomonas sulcata
Classification: PHOTOSYNTHESIS
Source organism: Proteomonas sulcata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-01-18
Authors: Jeffrey, P.D., Spangler, L.C., Scholes, G.D.
PDB entry 7tlg: Crystal Structure of small molecule beta-lactone 5 covalently bound to K-Ras(G12S)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.80001 Å
Deposited: 2022-01-18
Authors: Ziyang, Z., Guiley, K.Z., Shokat, K.M.
PDB entry 7tlh: Murine meteorin C-terminal NTR domain
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2022-01-18
Authors: Quan, C., Arndt, J.W.
PDB entry 7tli: THERMOLYSIN (90% ISOPROPANOL SOAKED CRYSTALS)
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 1998-10-30
Authors: English, A.C., Done, S.H., Groom, C.R., Hubbard, R.E.
PDB entry 7tlj: Rhodobacter sphaeroides Mitochondrial respiratory chain complex
Classification: OXIDOREDUCTASE
Source organism: Cereibacter sphaeroides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2022-01-18
Authors: Xia, D., Zhou, F., Esser, L., Huang, R.
PDB entry 7tlk: Crystal Structure of K-Ras(G12S)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71102 Å
Deposited: 2022-01-18
Authors: Ziyang, Z., Guiley, K.Z., Shokat, K.M.
PDB entry 7tll: Structure of SARS-CoV-2 Mpro Omicron P132H in complex with Nirmatrelvir (PF-07321332)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-01-18
Authors: Greasley, S.E., Ferre, R.A., Plotnikova, O., Liu, W., Stewart, A.E.
PDB entry 7tlm: Structure of Atopobium parvulum SufS
Classification: TRANSFERASE
Source organism: Lancefieldella parvula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-01-18
Authors: Karunakaran, G., Couture, J.F.
PDB entry 7tln: STRUCTURAL ANALYSIS OF THE INHIBITION OF THERMOLYSIN BY AN ACTIVE-SITE-DIRECTED IRREVERSIBLE INHIBITOR
Classification: HYDROLASE (METALLOPROTEINASE)
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1983-01-27
Authors: Matthews, B.W., Holmes, M.A., Tronrud, D.E.
PDB entry 7tlo: X-ray crystal structure of substrate free cytochrome P450 CYP142A3 from Mycobacterium Marinum
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium marinum ATCC BAA-535
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-01-18
Authors: Ghith, A., Bruning, J.B., Bell, S.G.
PDB entry 7tlp: Structure of Atopobium parvulum SufS K235R
Classification: TRANSFERASE
Source organism: Lancefieldella parvula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2022-01-18
Authors: Karunakaran, G., Couture, J.F.
PDB entry 7tlq: Structure of Atopobium parvulum SufS C375S
Classification: TRANSFERASE
Source organism: Lancefieldella parvula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-01-18
Authors: Karunakaran, G., Couture, J.F.
PDB entry 7tlr: Structure of Atopobium parvulum SufS A34Y mutant
Classification: TRANSFERASE
Source organism: Lancefieldella parvula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-01-18
Authors: Karunakaran, G., Couture, J.F.
PDB entry 7tls: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.73 Å
Deposited: 2022-01-18
Authors: Nguyen, A.I.
PDB entry 7tlt: SARS-CoV-2 Spike-derived peptide S489-497 (YFPLQSYGF) presented by HLA-A*29:02
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-01-18
Authors: Murdolo, L.D., Szeto, C., Gras, S.
PDB entry 7tlu: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.79 Å
Deposited: 2022-01-18
Authors: Nguyen, A.I.
PDB entry 7tlv: Structure of Neisseria gonorrhoeae peptidoglycan O-acetyltransferase B (PatB) substituted with selenomethionine
Classification: TRANSFERASE
Source organism: Neisseria gonorrhoeae FA 1090
Experimental method: X-RAY DIFFRACTION
Resolution: 1.50001 Å
Deposited: 2022-01-18
Authors: Brott, A.S., Stangherlin, S., Clarke, A.J.
PDB entry 7tlw: Murine Meteorin-like C-terminal NTR domain
Classification: HORMONE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-01-19
Authors: Quan, C., Arndt, J.W.
PDB entry 7tlx: Crystal Structure of cytochrome c from Pseudomonas putida S16
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida S16
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-01-19
Authors: Wu, K., Dulchavsky, M., Stull, F., Bardwell, J.C.A.
PDB entry 7tly: SARS-CoV-2 S B.1.1.529 Omicron variant (RBD + S309 Local Refinement)
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-01-19
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tlz: SARS-CoV-2 S NTD B.1.1.529 Omicron variant + S309 Local Refinement
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-01-19
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tm0: SARS-CoV-2 S B.1.1.529 Omicron variant + S309 + S2L20 Global Refinement
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-01-19
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tm1: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-01-19
Authors: Nguyen, A.I.
PDB entry 7tm2: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.88 Å
Deposited: 2022-01-19
Authors: Nguyen, A.I.
PDB entry 7tm3: Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon
Classification: RIBOSOME
Source organism: Canis lupus; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-01-19
Authors: Kim, M.K., Lewis, A.J.O., Keenan, R.J., Hegde, R.S.
PDB entry 7tm4: Crystal structure of apo 3-phosphoshikimate 1-carboxyvinyltransferase from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tm5: Crystal structure of shikimate-3-phosphate bound 3-phosphoshikimate 1-carboxyvinyltransferase from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tm6: Crystal structure of shikimate-3-phosphate and glyphosate bound 3-phosphoshikimate 1-carboxyvinyltransferase from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tm7: Crystal structure of Alpha-1,4 glucan phosphorylase from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tm8: Crystal structure of Bifunctional adenosylcobalamin biosynthesis protein from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tm9: Crystal structure of Bacterial alkaline phosphatase from Klebsiella pneumoniae
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tma: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2022-01-19
Authors: Nguyen, A.I.
PDB entry 7tmb: Crystal Structure of N-ethylmaleimide reductase from Klebsiella pneumoniae
Classification: OXIDOREDUCTASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tmc: TMEM106B singlet filament extracted from MSTD neurodegenerative human brain
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-01-19
Authors: Hoq, M.R., Bharath, S.R., Jiang, W.
PDB entry 7tmd: Crystal structure of Ornithine carbamoyltransferase from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tme: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.8 Å
Deposited: 2022-01-19
Authors: Nguyen, A.I.
PDB entry 7tmf: Crystal Structure of NAD(P)H nitroreductase from Klebsiella pneumoniae (short b-axis)
Classification: OXIDOREDUCTASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tmg: Crystal Structure of NAD(P)H nitroreductase from Klebsiella pneumoniae (long b-axis)
Classification: OXIDOREDUCTASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tmh: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.8 Å
Deposited: 2022-01-19
Authors: Nguyen, A.I.
PDB entry 7tmi: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.8 Å
Deposited: 2022-01-19
Authors: Nguyen, A.I.
PDB entry 7tmj: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2022-01-19
Authors: Nguyen, A.I.
PDB entry 7tmk: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.83 Å
Deposited: 2022-01-19
Authors: Nguyen, A.I.
PDB entry 7tml: Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2022-01-19
Authors: Nguyen, A.I.
PDB entry 7tmm: Complete V1 Complex from Saccharomyces cerevisiae
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-01-19
Authors: Vasanthakumar, T., Keon, K.A., Bueler, S.A., Jaskolka, M.C., Rubinstein, J.L.
PDB entry 7tmo: V1 complex lacking subunit C from Saccharomyces cerevisiae, State 1
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-01-19
Authors: Vasanthakumar, T., Keon, K.A., Bueler, S.A., Jaskolka, M.C., Rubinstein, J.L.
PDB entry 7tmp: V1 complex lacking subunit C from Saccharomyces cerevisiae, State 2
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-01-19
Authors: Vasanthakumar, T., Keon, K.A., Bueler, S.A., Jaskolka, M.C., Rubinstein, J.L.
PDB entry 7tmq: V1 complex lacking subunit C from Saccharomyces cerevisiae, State 3
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-01-19
Authors: Vasanthakumar, T., Keon, K.A., Bueler, S.A., Jaskolka, M.C., Rubinstein, J.L.
PDB entry 7tmr: V-ATPase from Saccharomyces cerevisiae, State 1
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-01-19
Authors: Vasanthakumar, T., Keon, K.A., Bueler, S.A., Jaskolka, M.C., Rubinstein, J.L.
PDB entry 7tms: V-ATPase from Saccharomyces cerevisiae, State 2
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-01-20
Authors: Vasanthakumar, T., Keon, K.A., Bueler, S.A., Jaskolka, M.C., Rubinstein, J.L.
PDB entry 7tmt: V-ATPase from Saccharomyces cerevisiae, State 3
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-01-20
Authors: Vasanthakumar, T., Keon, K.A., Bueler, S.A., Jaskolka, M.C., Rubinstein, J.L.
PDB entry 7tmu: Crystal Structure of the Protein of Unknown Function YPO0625 from Yersinia pestis
Classification: UNKNOWN FUNCTION
Source organism: Yersinia pestis CO92
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-01-20
Authors: Kim, Y., Chhor, G., Endres, M., Babnigg, G., Schneewind, O., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7tmv: Crystal structure of a Putative structural protein from Klebsiella pneumoniae
Classification: METAL BINDING PROTEIN
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-01-20
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tmw: Cryo-EM structure of the relaxin receptor RXFP1 in complex with heterotrimeric Gs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-01-20
Authors: Erlandson, S.C., Rawson, S., Kruse, A.C.
PDB entry 7tmx: Structure of Mouse Importin alpha NEIL1 NLS Peptide Complex
Classification: NUCLEAR PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-01-20
Authors: Moraes, I.R., de Oliveira, H.C., Fontes, M.R.M.
PDB entry 7tmy: Structure of Mouse Importin alpha NEIL3 NLS Peptide Complex
Classification: NUCLEAR PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2022-01-20
Authors: Moraes, I.R., de Oliveira, H.C., Fontes, M.R.M.
PDB entry 7tmz: Integrin alpha IIB beta3 complex with BMS compound 4
Classification: BLOOD CLOTTING/INHIBITOR
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.20002 Å
Deposited: 2022-01-20
Authors: Zhu, J., Lin, F.-Y., Zhu, J., Springer, T.A.
PDB entry 7tn0: SARS-CoV-2 Omicron RBD in complex with human ACE2 and S304 Fab and S309 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-01-20
Authors: McCallum, M., Czudnochowski, N., Nix, J.C., Croll, T.I., SSGCID, Dillen, J.R., Snell, G., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tn1: Multistate design to stabilize viral class I fusion proteins
Classification: VIRAL PROTEIN
Source organism: Respiratory syncytial virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-01-20
Authors: Huang, J., Banerjee, A., Gonzalez, K., Mousa, J., Strauch, E.
PDB entry 7tn2: Composite model of a Chd1-nucleosome complex in the nucleotide-free state derived from 2.3A and 2.7A Cryo-EM maps
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-01-20
Authors: Nodelman, I.M., Bowman, G.D., Armache, J.-P.
PDB entry 7tn3: Crystal structure of Zea mays Inositol-tetrakisphosphate Kinase 1 mutant (ZmITPK1-F189A/H192A)
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-01-20
Authors: Zong, G., Wang, H., Shears, S.B.
PDB entry 7tn4: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 3-diphosphoinositol 1,2,4,5-tetrakisphosphate (3-PP-IP4), Mg and Fluoride ion
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-01-20
Authors: Zong, G., Wang, H., Shears, S.B.
PDB entry 7tn5: Crystal structure of Zea mays Inositol-tetrakisphosphate Kinase 1 (ITPK1)
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-01-20
Authors: Zong, G., Wang, H., Shears, S.B.
PDB entry 7tn6: Crystal structure of Zea mays Inositol-tetrakisphosphate Kinase 1 mutant (ZmITPK1-H192A)
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-01-20
Authors: Zong, G., Wang, H., Shears, S.B.
PDB entry 7tn7: Crystal structure of Zea mays Inositol-tetrakisphosphate Kinase 1 mutant (ZmITPK1 residues 18-218-Gly-Ser-Gly-Ser-Gly-248-328)
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-01-20
Authors: Zong, G., Wang, H., Shears, S.B.
PDB entry 7tn8: Crystal structure of Zea mays Inositol-tetrakisphosphate Kinase 1 mutant (ZmITPK1-H192A) in complex with InsP6
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-01-20
Authors: Zong, G., Wang, H., Shears, S.B.
PDB entry 7tn9: Structure of the Inmazeb cocktail and resistance to escape against Ebola virus
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Ebola virus - Mayinga, Zaire, 1976; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-01-20
Authors: Rayaprolu, V., Fulton, B., Rafique, A., Arturo, E., Williams, D., Hariharan, C., Callaway, H., Parvate, A., Schendel, S.L., Parekh, D., Hui, S., Shaffer, K., Pascal, K.E., Wloga, E., Giordano, S., Copin, R., Franklin, M., Boytz, R.M., Donahue, C., Davey, R., Baum, A., Kyratsous, C.A., Saphire, E.O.
PDB entry 7tnb: Caulobacter segnis arene reductase (CSAR) - WT
Classification: OXIDOREDUCTASE
Source organism: Caulobacter segnis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2022-01-20
Authors: Garfinkle, S.E., Jeffrey, P., Hyster, T.K.
PDB entry 7tnc: M13F/G116F Pseudomonas aeruginosa azurin
Classification: ELECTRON TRANSPORT
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2022-01-20
Authors: Liu, Y., Lu, Y.
PDB entry 7tnd: The crystal structure of CYP199A4 bound to 4-phenoxybenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.825 Å
Deposited: 2022-01-20
Authors: Podgorski, M., Bell, S.G.
PDB entry 7tne: Selenium-incorporated nitrogenase Fe protein (Av2-Se) from A. vinelandii (22 mM KSeCN)
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2022-01-20
Authors: Buscagan, T.M., Kaiser, J.T., Rees, D.C.
PDB entry 7tnf: The crystal structure of F298V CYP199A4 bound to 4-phenylbenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.539 Å
Deposited: 2022-01-21
Authors: Podgorski, M., Bell, S.G.
PDB entry 7tng: Kringle domain of human Receptor Tyrosine Kinase-Like Orphan Receptor 1 (ROR1)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-01-21
Authors: Guarino, S.R., Di Bello, A., Palamini, M., Forneris, F.
PDB entry 7tnh: Crystal structure of CSF1R kinase domain in complex with DP-6233
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-01-21
Authors: Edwards, T.E., Arakaki, T.L., Chun, L., Flynn, D.L.
PDB entry 7tni: Structure of EC12 Y1392W variant of BT-R1 from Manduca sexta, a Cry1A toxin binding domain
Classification: CELL ADHESION
Source organism: Manduca sexta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-01-21
Authors: Fisher, A.J., Wilcox, X.E.
PDB entry 7tnj: Complex NNNN of AMPA-subtype iGluR GluA2 in complex with auxiliary subunit gamma2 (Stargazin) at low glutamate concentration (20 uM) in the presence of cyclothiazide (100 uM)
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.02 Å
Deposited: 2022-01-21
Authors: Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 7tnk: Complex GNNN of AMPA-subtype iGluR GluA2 in complex with auxiliary subunit gamma2 (Stargazin) at low glutamate concentration (20 uM) in the presence of cyclothiazide (100 uM)
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-01-21
Authors: Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 7tnl: Complex GNGN1 of AMPA-subtype iGluR GluA2 in complex with auxiliary subunit gamma2 (Stargazin) at low glutamate concentration (20 uM) in the presence of cyclothiazide (100 uM)
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2022-01-21
Authors: Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 7tnm: Complex GNGN2 of AMPA-subtype iGluR GluA2 in complex with auxiliary subunit gamma2 (Stargazin) at low glutamate concentration (20 uM) in the presence of cyclothiazide (100 uM)
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.74 Å
Deposited: 2022-01-21
Authors: Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 7tnn: Complex GGNN of AMPA-subtype iGluR GluA2 in complex with auxiliary subunit gamma2 (Stargazin) at low glutamate concentration (20 uM) in the presence of cyclothiazide (100 uM)
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.91 Å
Deposited: 2022-01-21
Authors: Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 7tno: Complex GGGN of AMPA-subtype iGluR GluA2 in complex with auxiliary subunit gamma2 (Stargazin) at low glutamate concentration (20 uM) in the presence of cyclothiazide (100 uM)
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.02 Å
Deposited: 2022-01-21
Authors: Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 7tnp: Complex GGGG of AMPA-subtype iGluR GluA2 in complex with auxiliary subunit gamma2 (Stargazin) at low glutamate concentration (20 uM) in the presence of cyclothiazide (100 uM)
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2022-01-21
Authors: Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 7tnq: The symmetry-released subpellicular microtubule map from detergent-extracted Toxoplasma cells
Classification: CELL INVASION
Source organism: Toxoplasma gondii
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.4 Å
Deposited: 2022-01-21
Authors: Sun, S.Y., Pintilie, G.D., Chen, M.
PDB entry 7tns: Subpellicular microtubule from detergent-extract Toxoplasma gondii cells
Classification: CELL INVASION
Source organism: Toxoplasma gondii
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2022-01-21
Authors: Sun, S.Y., Pintilie, G.D., Chen, M., Chiu, W.
PDB entry 7tnt: The tubulin-based conoid from detergent-extract Toxoplasma gondii cells
Classification: CELL INVASION
Source organism: Toxoplasma gondii
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2022-01-21
Authors: Sun, S.Y., Pintilie, G.D., Chen, M., Chiu, W.
PDB entry 7tnu: The crystal structure of F298V CYP199A4 bound to 4-cyclohexylbenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.584 Å
Deposited: 2022-01-21
Authors: Podgorski, M., Bell, S.G.
PDB entry 7tnv: Crystal Structure Of Human NADH-Cytochrome B5 Reductase T117S Mutant
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2022-01-21
Authors: Zheng, A., Thibodeau, P.H.
PDB entry 7tnw: Structural and functional impact by SARS-CoV-2 Omicron spike mutations
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-01-21
Authors: Zhang, J., Xiao, T.S., Cai, Y.F., Peng, H.Q., Volloch, S.R., Chen, B.
PDB entry 7tnx: Cryo-EM structure of RIG-I in complex with p3dsRNA
Classification: IMMUNE SYSTEM/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2022-01-22
Authors: Wang, W., Pyle, A.M.
PDB entry 7tny: Cryo-EM structure of RIG-I in complex with p2dsRNA
Classification: IMMUNE SYSTEM/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-01-22
Authors: Wang, W., Pyle, A.M.
PDB entry 7tnz: Cryo-EM structure of RIG-I in complex with p1dsRNA
Classification: IMMUNE SYSTEM/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2022-01-22
Authors: Wang, W., Pyle, A.M.
PDB entry 7to0: Cryo-EM structure of RIG-I in complex with OHdsRNA
Classification: IMMUNE SYSTEM/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-01-22
Authors: Wang, W., Pyle, A.M.
PDB entry 7to1: Cryo-EM structure of RIG-I bound to the end of p3SLR30 (+ATP)
Classification: IMMUNE SYSTEM/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2022-01-22
Authors: Wang, W., Pyle, A.M.
PDB entry 7to2: Cryo-EM structure of RIG-I bound to the internal sites of p3SLR30 (+ATP)
Classification: IMMUNE SYSTEM/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-01-22
Authors: Wang, W., Pyle, A.M.
PDB entry 7to3: Structure of Enterobacter cloacae Cap2-CdnD02 2:2 complex
Classification: TRANSFERASE
Source organism: Enterobacter cloacae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2022-01-22
Authors: Gu, Y., Ye, Q., Ledvina, H.E., Quan, Y., Lau, R.K., Zhou, H., Whiteley, A.T., Corbett, K.D.
PDB entry 7to4: Structural and functional impact by SARS-CoV-2 Omicron spike mutations
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-01-22
Authors: Zhang, J., Xiao, T.S., Cai, Y.F., Peng, H.Q., Volloch, S.R., Chen, B.
PDB entry 7to5: HIV-1 wild type protease with GRL-05816A, with C-4 substituted cyclohexane-fused bis-tetrahydrofuran (Chf-THF) derivatives as P2-ligand [diastereomer 1]
Classification: ANTIVIRAL PROTEIN/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2022-01-23
Authors: Wang, Y.-F., Agniswamy, J., Ghosh, A.K., Weber, I.T.
PDB entry 7to6: HIV-1 wild type protease with GRL-01717A, with C-4 substituted cyclohexane-fused bis-tetrahydrofuran (Chf-THF) derivatives as P2-ligand [diastereomer 2]
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2022-01-23
Authors: Wang, Y.-F., Agniswamy, J., Ghosh, A.K., Weber, I.T.
PDB entry 7to7: BRD3-BD1 in complex with RaPID linear peptide 1xAcK.4XE (monoAcK.4xE)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2022-01-23
Authors: Mackay, J.P., Low, J.K.K., Patel, K.
PDB entry 7to8: BRD3-BD1 in complex with RaPID linear peptide 2xAcK.1 (diAcK.1)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-01-23
Authors: Patel, K., Low, J.K.K., Mackay, J.P.
PDB entry 7to9: BRD3-BD1 in complex with RaPID linear peptide 2xAcK.4xE (diAcK.4xE)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-01-23
Authors: Mackay, J.P., Low, J.K.K., Patel, K.
PDB entry 7toa: BRD3-BD1 in complex with RaPID linear peptide 3xAcK.1 (triAcK.1)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2022-01-23
Authors: Patel, K., Low, J.K.K., Mackay, J.P.
PDB entry 7tob: Crystal structure of the SARS-CoV-2 Omicron main protease (Mpro) in complex with inhibitor GC376
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-01-24
Authors: Sacco, M.D., Wang, J., Chen, Y.
PDB entry 7toc: Crystal Structure of the Mitochondrial Ketol-acid Reductoisomerase IlvC from Candida auris
Classification: ISOMERASE
Source organism: [Candida] auris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2022-01-24
Authors: Kim, Y., Evdokimova, E., Di, R., Stogios, P., Savchenko, S., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7tod: Solution structure of the phosphatidylinositol 3-phosphate binding domain from the Legionella effector SetA
Classification: LIPID BINDING PROTEIN
Source organism: Legionella pneumophila
Experimental method: SOLUTION NMR
Deposited: 2022-01-24
Authors: Beck, W.H.J., Enoki, T.A., Feigenson, G.W., Nicholson, L., Oswald, R., Mao, Y.
PDB entry 7toe: Structure of G6PD-WT tetramer with no symmetry imposed
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-01-24
Authors: Wei, X., Marmorstein, R.
PDB entry 7tof: Structure of G6PD-WT dimer with no symmetry applied
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-01-24
Authors: Wei, X., Marmorstein, R.
PDB entry 7tog: Crystal structure of carbohydrate esterase PbeAcXE, apoenzyme
Classification: HYDROLASE
Source organism: Prolixibacter bellariivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-01-24
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Jurak, E., Master, E.
PDB entry 7toh: Crystal structure of carbohydrate esterase PbeAcXE, in complex with MeGlcpA-Xylp
Classification: HYDROLASE
Source organism: Prolixibacter bellariivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2022-01-24
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Jurak, E., Master, E.
PDB entry 7toi: Crystal structure of carbohydrate esterase PbeAcXE, in complex with acetate
Classification: HYDROLASE
Source organism: Prolixibacter bellariivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2022-01-24
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Jurak, E., Master, E.
PDB entry 7toj: Crystal structure of carbohydrate esterase CspAcXE, apoenzyme
Classification: HYDROLASE
Source organism: Chryseobacterium sp. YR480
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-01-24
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Jurak, E., Master, E.
PDB entry 7tok: Crystal structure of the CBM domain of carbohydrate esterase FjoAcXE
Classification: HYDROLASE
Source organism: Flavobacterium johnsoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-01-24
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Jurak, E., Master, E.
PDB entry 7tol: X-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (GDGT-MAS) from Methanocaldococcus jannaschii with archaeal lipid, 5'deoxyadenosine, and methionine bound
Classification: OXIDOREDUCTASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2022-01-24
Authors: Lloyd, C.T., Booker, S.J., Boal, A.K.
PDB entry 7tom: X-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (GDGT-MAS) from Methanocaldococcus jannaschii with bacterial lipid substrate analog, 5'deoxyadenosine, and methionine bound
Classification: OXIDOREDUCTASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-01-24
Authors: Lloyd, C.T., Booker, S.J., Boal, A.K.
PDB entry 7too: Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
Classification: RIBOSOME
Source organism: Escherichia coli; Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-01-24
Authors: Loveland, A.B., Svidritskiy, E., Susorov, D., Lee, S., Park, A., Zvornicanin, S., Demo, G., Gao, F.B., Korostelev, A.A.
PDB entry 7top: Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20
Classification: RIBOSOME
Source organism: Escherichia coli; Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-01-24
Authors: Loveland, A.B., Svidritskiy, E., Susorov, D., Lee, S., Park, A., Zvornicanin, S., Demo, G., Gao, F.B., Korostelev, A.A.
PDB entry 7toq: Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-01-24
Authors: Loveland, A.B., Svidritskiy, E., Susorov, D., Lee, S., Park, A., Zvornicanin, S., Demo, G., Gao, F.B., Korostelev, A.A.
PDB entry 7tor: Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-01-24
Authors: Loveland, A.B., Svidritskiy, E., Susorov, D., Lee, S., Park, A., Zvornicanin, S., Demo, G., Gao, F.B., Korostelev, A.A.
PDB entry 7tos: E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-01-24
Authors: Loveland, A.B., Svidritskiy, E., Susorov, D., Lee, S., Park, A., Zvornicanin, S., Demo, G., Gao, F.B., Korostelev, A.A.
PDB entry 7tot: Crystal Structure of pantothenate synthetase from Bartonella henselae
Classification: LIGASE
Source organism: Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-01-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tou: Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 3-RBD-down conformation; consensus state D1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2022-01-24
Authors: Gobeil, S., Acharya, P.
PDB entry 7tov: Delta (B.1.617.2) SARS-CoV-2 variant spike protein (S-GSAS-Delta) in the 1-RBD-up conformation; consensus state D2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2022-01-24
Authors: Gobeil, S., Acharya, P.
PDB entry 7tow: Antibody DH1058 Fab fragment bound to SARS-CoV-2 fusion peptide
Classification: IMMUNE SYSTEM/Viral Protein
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-01-24
Authors: Gobeil, S., Acharya, P.