LiteFold/PDB huggingface dataset:
PDB entry 8vzv: Human TDO (hTDO) in complex with LM10
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2024-02-12
Authors: Ishigami, I., Yeh, S.-R., Lewis-Ballester, A.
PDB entry 8vzw: Structure of humanized MS-Hu6 Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-02-12
Authors: Misra, A., Schuermann, J., Gupta, Y.K., Yuen, T., Zaidi, M.
PDB entry 8vzx: Q108K:K40L:T53A:R58F mutant of hCRBPII bound to synthetic fluorophore TD-1V
Classification: RETINOL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-02-13
Authors: Nossoni, Z., Bingham, C.R., Geiger, J.H.
PDB entry 8vzy: Q108K:K40L:T51V:T53S:R58Y mutant of hCRBPII bound to synthetic fluorophore TD-1V
Classification: RETINOL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2024-02-13
Authors: Nossoni, Z., Bingham, C.R., Geiger, J.H., Borhan, B.
PDB entry 8vzz: Q108K:K40L:T51V:T53S:Y19W:R58W mutant of hCRBPII bound to synthetic fluorophore TD-1V
Classification: RETINOL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2024-02-13
Authors: Nosssoni, Z., Bingham, C.R., Geiger, J.H., Borhan, B.
PDB entry 8w00: Q108K:K40L:T51V:T53S:Y19W:R58W:L117E mutant of hCRBPII bound to synthetic fluorophore TD-1V
Classification: RETINOL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2024-02-13
Authors: Nossoni, Z., Bingham, C.R., Geiger, J.H.
PDB entry 8w01: Crystal structure of DUF1735 domain-containing protein (GH18-like) from Bacteroides faecium at 2.7 A resolution (Space group C2)
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2024-02-13
Authors: Sastre, D.E., Navarro, M.V.A.S., Sultana, N., Sundberg, E.J.
PDB entry 8w02: Q108K:K40L:T51V:T53S:R58W mutant of hCRBPII bound to synthetic fluorophore TD-1V
Classification: RETINOL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.499 Å
Deposited: 2024-02-13
Authors: Ghanbarpour, A., Geiger, J.H., Borhan, B.
PDB entry 8w03: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with k-1154
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2024-02-13
Authors: Min, C.K., Nwachukwu, J.C., Hou, Y., Russo, R.J., Papa, A., Min, J., Peng, R., Kim, S.H., Ziegler, Y., Rangarajan, E.S., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 8w04: Crystal structure of DUF1735-domain containing protein (GH18-like) from Bacteroides faecium at 2.9 A resolution (Space group P21)
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2024-02-13
Authors: Sastre, D.E., Navarro, M.V.A.S., Sultana, N., Sundberg, E.J.
PDB entry 8w05: Crystal Structure of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood
Classification: ISOMERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2024-02-13
Authors: Perez-Nino, J.A., Rodriguez-Romero, A., Guerra-Borrego, Y., Fernandez-Velasco, D.A.
PDB entry 8w06: Crystal Structure of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood with PGH
Classification: ISOMERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-02-13
Authors: Perez-Nino, J.A., Rodriguez-Romero, A., Guerra-Borrego, Y., Fernandez-Velasco, D.A.
PDB entry 8w07: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with k-402
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-02-13
Authors: Min, C.K., Nwachukwu, J.C., Hou, Y., Russo, R.J., Papa, A., Min, J., Peng, R., Kim, S.H., Ziegler, Y., Rangarajan, E.S., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.K., Nettles, K.W.
PDB entry 8w08: Crystal Structure of the worst case reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood
Classification: ISOMERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-02-13
Authors: Perez-Nino, J.A., Rodriguez-Romero, A., Guerra-Borrego, Y., Fernandez-Velasco, D.A.
PDB entry 8w09: HIV-1 wild-type intasome core
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-02-13
Authors: Li, M., Craigie, R.
PDB entry 8w0a: Human DNA polymerase theta helicase domain in complex with ssDNA, dimer form
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-02-13
Authors: Ito, F., Li, Z., Chen, X.S.
PDB entry 8w0b: Crystal structure of Acetyl-CoA synthetase 2 from Candida albicans in complex with a cyclopropyl AMP ester inhibitor
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-02-13
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8w0c: Crystal structure of Acetyl-CoA synthetase 2 from Candida albicans in complex with a cyclopentyl ester AMP inhibitor
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-02-13
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8w0d: Crystal structure of Acetyl-CoA synthetase 2 from Candida albicans in complex with an isopropyl AMP ester inhibitor
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-02-13
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8w0e: Cryo-EM structure of a human MCM2-7 single hexamer on dsDNA
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-02-13
Authors: Hunker, O., Yang, R., Bleichert, F.
PDB entry 8w0f: Cryo-EM structure of a human MCM2-7 double hexamer on dsDNA
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-02-13
Authors: Hunker, O., Yang, R., Bleichert, F.
PDB entry 8w0g: Cryo-EM structure of a human MCM2-7 dimer
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-02-13
Authors: Yang, R., Hunker, O., Bleichert, F.
PDB entry 8w0h: Crystal structure of Acetyl-CoA synthetase 2 from Candida albicans in complex with an isopropyl AMP ester inhibitor (trigonal form)
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2024-02-13
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8w0i: Cryo-EM structure of the human MCM2-7 heterohexamer
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-02-13
Authors: Yang, R., Hunker, O., Bleichert, F.
PDB entry 8w0j: Crystal structure of Acetyl-CoA synthetase 2 from Candida albicans in complex with a propyne AMP ester inhibitor
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-02-13
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8w0k: Minimal PutA proline dehydrogenase domain (design #2) complexed with 1-hydroxyethane-1-sulfonate
Classification: OXIDOREDUCTASE
Source organism: Sinorhizobium meliloti SM11
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2024-02-13
Authors: Tanner, J.J., Meeks, K.R.
PDB entry 8w0l: Crystal structure of Acetyl-CoA synthetase 2 from Candida albicans in complex with a propyne AMP ester inhibitor and CoA
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-02-13
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8w0m: Crystal structure of Acetyl-CoA synthetase 2 from Candida albicans in complex with a Acetyl Sulfamate AMP ester inhibitor
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-02-13
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8w0n: IRED crystal structure
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2024-02-13
Authors: Peat, T.S., Newman, J.
PDB entry 8w0o: GDH-105 crystal structure
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-02-13
Authors: Peat, T.S., Newman, J.
PDB entry 8w0p: BsaXI -- Type IIB R-M system
Classification: ANTIMICROBIAL PROTEIN
Source organism: Geobacillus stearothermophilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2024-02-13
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 8w0q: Pembrolizumab CDR-H3 Loop Mimic
Classification: IMMUNE SYSTEM
Experimental method: SOLUTION NMR
Deposited: 2024-02-14
Authors: Feig, M., Roche, S.P.
PDB entry 8w0r: Human EBP complexed with compound 1
Classification: ISOMERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-02-14
Authors: Sun, D., Masureel, M.
PDB entry 8w0s: Human EBP complexed with compound 3a
Classification: ISOMERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-02-14
Authors: Sun, D., Masureel, M.
PDB entry 8w0t: Human LCAD
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-02-14
Authors: Xia, C., Kim, J.J.P.
PDB entry 8w0u: Human LCAD complexed with Acetoacetyl Coenzyme A
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-02-14
Authors: Xia, C., Kim, J.J.P.
PDB entry 8w0v: Crystal structure of broadly neutralizing antibody hcab55 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Hepacivirus hominis; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2024-02-14
Authors: Flyak, A.I., Wilcox, X.E.
PDB entry 8w0w: Crystal structure of broadly neutralizing antibody hcab64 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Hepacivirus hominis; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2024-02-14
Authors: Flyak, A.I., Wilcox, X.E.
PDB entry 8w0x: Crystal structure of broadly neutralizing antibody hcab40 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Hepacivirus hominis; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2024-02-14
Authors: Flyak, A.I., Wilcox, X.E.
PDB entry 8w0y: Crystal structure of broadly neutralizing antibody hcab17 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Hepacivirus hominis; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2024-02-14
Authors: Flyak, A.I., Wilcox, X.E.
PDB entry 8w0z: Human LCAD complexed with Lauric Acid
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-02-14
Authors: Xia, C., Kim, J.J.P.
PDB entry 8w10: Plasmodium vivax PMX-MK7602 inhibitor complex
Classification: HYDROLASE/Inhibitor
Source organism: Plasmodium vivax Sal-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2024-02-14
Authors: Hodder, A.N., Scally, S.W., Cowman, A.F.
PDB entry 8w11: Structure of human PIN1 covalently derivatized with SuFEx compound
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-02-14
Authors: Louie, G.V., Noel, J.P., Wang, W.-M., Kelly, J.W.
PDB entry 8w12: Cryo-EM structure of VP3-VP6 heterohexamer
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus (serotype 1 / isolate South Africa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-02-14
Authors: Xia, X., Sung, P.Y., Martynowycz, M.W., Gonen, T., Roy, P., Zhou, Z.H.
PDB entry 8w13: Crystal structure of MYST acetyltransferase domain in complex with N-(1-(5-bromo-2-methoxyphenyl)-1H-1,2,3-triazol-4-yl)-2-methoxybenzenesulfonamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-02-15
Authors: Chen, C., Dou, Y., Wang, M., Xu, C., Buesking, A.
PDB entry 8w14: Rhodanese-like domain from Acinetobacter baumannii 118362
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii 118362
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-02-15
Authors: Benisch, R., Giessen, T.W.
PDB entry 8w15: HTT in complex with HAP40 in the apo state.
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2024-02-15
Authors: Poweleit, N., Boudet, J., Doherty, E.
PDB entry 8w16: Pyroglutamaic acid position 1 synthetic analogue of RgIA
Classification: STRUCTURAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-02-15
Authors: Agwa, A.J.
PDB entry 8w17: Lactam bridge synthetic analogue of RgIA
Classification: STRUCTURAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-02-15
Authors: Agwa, A.J.
PDB entry 8w18: The crystal structure of the Michaelis-Menten complex of a C1s/C1-INH at 3.94 Angstroms
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.94 Å
Deposited: 2024-02-15
Authors: Garrigues, R.J., Garcia, B.L.
PDB entry 8w19: Cryo-EM structure of BTV star-subcore
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus (serotype 1 / isolate South Africa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2024-02-15
Authors: Xia, X., Sung, P.Y., Martynowycz, M.W., Gonen, T., Roy, P., Zhou, Z.H.
PDB entry 8w1a: Cryo-EM Structure of KSHV ORF74 Apo Dimer at 2.8A
Classification: VIRAL PROTEIN
Source organism: Human gammaherpesvirus 8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-02-15
Authors: Sahoo, B., Seo, H.D., Dai, X., Jung, J.
PDB entry 8w1c: Cryo-EM structure of BTV pre-subcore
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus (serotype 1 / isolate South Africa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-02-15
Authors: Xia, X., Sung, P.Y., Martynowycz, M.W., Gonen, T., Roy, P., Zhou, Z.H.
PDB entry 8w1d: CRYSTAL STRUCTURE OF DPS-LIKE PROTEIN PA4880 FROM PSEUDOMONAS AERUGINOSA (DIMERIC FORM)
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-02-15
Authors: Lovell, S., Battaile, K.P., Rivera, M.
PDB entry 8w1e: Crystal Structure of DPS-like protein PA4880 from Pseudomonas aeruginosa (dodecamer)
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-02-15
Authors: Lovell, S., Liu, L., Seibold, S., Battaile, K.P., Rivera, M.
PDB entry 8w1f: Crystal Structure of DPS-like protein PA4880 from Pseudomonas aeruginosa (dodecamer, Mg bound)
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-02-15
Authors: Lovell, S., Liu, L., Seibold, S., Battaile, K.P., Rivera, M.
PDB entry 8w1h: Crystal Structure of human Tryptophan 2,3-dioxygenase in complex with PYN3 inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-02-15
Authors: Geeraerts, Z., Yeh, S.-R.
PDB entry 8w1i: Cryo-EM structure of BTV subcore
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus (serotype 1 / isolate South Africa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2024-02-16
Authors: Xia, X., Sung, P.Y., Martynowycz, M.W., Gonen, T., Roy, P., Zhou, Z.H.
PDB entry 8w1j: Crystal Structure of a fatty acid decarboxylase from Corynebacterium lipophiloflavum in complex with palmitic acid
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium lipophiloflavum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-02-16
Authors: Generoso, W.C., Miyamoto, R.Y., Murakami, M.T., Zanphorlin, L.M.
PDB entry 8w1k: Crystal Structure of a fatty acid decarboxylase from Corynebacterium lipophiloflavum in complex with oleic acid
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium lipophiloflavum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-02-16
Authors: Generoso, W.C., Miyamoto, R.Y., Murakami, M.T., Zanphorlin, L.M.
PDB entry 8w1l: Structure of CSF1R kinase domain in complex with Cpd 32
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-02-16
Authors: Kothe, M., Chodaparambil, J.
PDB entry 8w1m: T.thermophilus DNAK nucleotide binding domain in complex with ADP
Classification: CHAPERONE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-02-16
Authors: Miller, D.J., Kalodimos, C.
PDB entry 8w1n: Structure of transthyretin pathogenic mutation A120S
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-02-16
Authors: Ferguson, J.A., Stanfield, R.L., Wright, P.E.
PDB entry 8w1o: Cryo-EM structure of BTV virion
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus (serotype 1 / isolate South Africa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-02-16
Authors: Xia, X., Sung, P.Y., Martynowycz, M.W., Gonen, T., Roy, P., Zhou, Z.H.
PDB entry 8w1p: Structure of Selenomonas sp. Cascade (SsCascade)
Classification: IMMUNE SYSTEM
Source organism: Selenomonas sp.; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-02-16
Authors: Hirano, S., Zhang, F.
PDB entry 8w1q: Aerobic crystal structure of iron-bound FlcD from Pseudomonas aeruginosa
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-02-17
Authors: Walker, M.E., Grove, T.L., Li, B., Redinbo, M.R.
PDB entry 8w1r: Cryo-EM structure of BTV core
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus (serotype 1 / isolate South Africa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-02-17
Authors: Xia, X., Sung, P.Y., Martynowycz, M.W., Gonen, T., Roy, P., Zhou, Z.H.
PDB entry 8w1s: Cryo-EM structure of BTV pre-core
Classification: VIRAL PROTEIN
Source organism: Bluetongue virus (serotype 1 / isolate South Africa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-17
Authors: Xia, X., Sung, P.Y., Martynowycz, M.W., Gonen, T., Roy, P., Zhou, Z.H.
PDB entry 8w1t: SARS-CoV-2 Main protease bound to a non-covalent non-peptidic HTS hit
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-02-18
Authors: Bian, X., Tang, S., Sacchettini, J.C.
PDB entry 8w1u: SARS-CoV-2 Main protease bound to non-covalent lead molecule NZ-804
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-18
Authors: Bian, X., Tang, S., Sacchettini, J.C.
PDB entry 8w1v: The beta2 adrenergic receptor bound to a bitopic ligand
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-02-19
Authors: Gaiser, B., Danielsen, M., Xu, X., Jorgensen, K., Fronik, P., Marcher-Rorsted, E., Wrobe, T., Hirata, K., Liu, X., Mathiesen, J., Pedersen, D.
PDB entry 8w1w: 2.03 angstrom resolution crystal structure of as-isolated KatG from Mycobacterium tuberculosis with an MYW-OOH cofactor
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.033 Å
Deposited: 2024-02-19
Authors: Liu, A., Li, J.
PDB entry 8w1x: 2.35-angstrom resolution intermediate crystal structure of KatG from Mycobacterium tuberculosis with an MYW-OOH cofactor soaked with peroxide for 5 minutes
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-02-19
Authors: Liu, A., Li, J.
PDB entry 8w1y: 2.30 angstrom resolution intermediate crystal structure of KatG from Mycobacterium tuberculosis with an MYW-OOH cofactor soaked with peroxide for 1 minute
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-02-19
Authors: Li, J., Duan, R., Liu, A.
PDB entry 8w1z: Structure of a LGR dimer from Caenorhabditis elegans in apo state
Classification: MEMBRANE PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2024-02-19
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8w20: Umb1 umbrella toxin particle
Classification: TOXIN
Source organism: Streptomyces coelicolor A3(2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-02-19
Authors: Park, Y.J., Zhao, Q., Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio, F., Mougous, J.D., Veesler, D.
PDB entry 8w21: Crystal Structure of Enolase from Chlamydia trachomatis (P43212 Form)
Classification: HYDROLASE
Source organism: Chlamydia trachomatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-02-19
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8w22: Umb1 umbrella toxin particle (local refinement of UmbB1 bound ALF of UmbC1 and UmbA1)
Classification: TOXIN
Source organism: Streptomyces coelicolor A3(2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-02-19
Authors: Park, Y.J., Zhao, Q., Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio, F., Mougous, J.D., Veesler, D.
PDB entry 8w23: Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, TDI-2804 (consensus map).
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.28 Å
Deposited: 2024-02-19
Authors: Malone, B.F., Zimmerman, J.L., Dow, L.E., Hite, R.K.
PDB entry 8w25: Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, TDI-2804 (focused refinement map).
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2024-02-20
Authors: Malone, B.F., Zimmerman, J.L., Dow, L.E., Hite, R.K.
PDB entry 8w26: X-ray crystal structure of the GAF-PHY domains of SyB-Cph1
Classification: GENE REGULATION
Source organism: Synechococcus sp. JA-2-3B'a(2-13)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-02-20
Authors: Burgie, E.S., Vierstra, R.D.
PDB entry 8w27: Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, XAV (consensus map).
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2024-02-20
Authors: Malone, B.F., Zimmerman, J.L., Dow, L.E., Hite, R.K.
PDB entry 8w28: Cryo-EM structure of human tankyrase 2 SAM-PARP filament bound to compound, XAV (focused refinement map).
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2024-02-20
Authors: Malone, B.F., Zimmerman, J.L., Dow, L.E., Hite, R.K.
PDB entry 8w2c: Thioesterase domain structure from Sulfazecin biosynthetic nonribosomal peptide synthetase SulM
Classification: HYDROLASE
Source organism: Paraburkholderia acidicola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-02-20
Authors: Patel, K.D., Gulick, A.M.
PDB entry 8w2d: holo-PCP-Thioesterase di-domain structure from the sulfazecin biosynthetic nonribosomal peptide synthetase, SulM
Classification: HYDROLASE
Source organism: Paraburkholderia acidicola
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-02-20
Authors: Patel, K.D., Gulick, A.M.
PDB entry 8w2e: SARS-CoV-2 M protein dimer in complex with JNJ-9676 and Fab-B
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; SARS-CoV-2 pseudovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-02-20
Authors: Yin, Y., Van Damme, E.
PDB entry 8w2f: Plasmodium falciparum 20S proteasome bound to an inhibitor
Classification: CYTOSOLIC PROTEIN/INHIBITOR
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-20
Authors: Han, Y., Deng, X., Ray, S., Chen, Z., Phillips, M.
PDB entry 8w2g: Human liver phosphofructokinase-1 in the R-state conformation
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-02-20
Authors: Lynch, E.M., Kollman, J.M., Webb, B.A.
PDB entry 8w2h: Human liver phosphofructokinase-1 in the T-state conformation
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-02-20
Authors: Lynch, E.M., Kollman, J.M., Webb, B.A.
PDB entry 8w2i: Human liver phosphofructokinase-1 filament in the R-state conformation
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-02-20
Authors: Lynch, E.M., Kollman, J.M., Webb, B.A.
PDB entry 8w2j: Human liver phosphofructokinase-1 filament in the T-state conformation
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-20
Authors: Lynch, E.M., Kollman, J.M., Webb, B.A.
PDB entry 8w2k: Crystal Structure of human Tryptophan 2,3-dioxygenase in complex with PAN3F inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-02-20
Authors: Geeraerts, Z., Yeh, S.-R.
PDB entry 8w2l: TRPM7 structure in complex with anticancer agent CCT128930 in closed state
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-02-20
Authors: Nadezhdin, K.D., Sobolevsky, A.I.
PDB entry 8w2n: E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-02-20
Authors: Kimbrough, E.M., Dunham, C.M., Nguyen, H.A.
PDB entry 8w2o: Yeast U1 snRNP with humanized U1C Zinc-Finger domain
Classification: SPLICING
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-02-20
Authors: Shi, S.S., Kuang, Z.L., Zhao, R.
PDB entry 8w2p: BsaXI-DNA complex I
Classification: DNA BINDING PROTEIN/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-02-20
Authors: Shen, B.W., Stoddard, B.L., Xu, S.
PDB entry 8w2q: BsaXI-DNA complex II
Classification: DNA BINDING PROTEIN/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-02-21
Authors: Shen, B.W., Stoddard, B.L., Xu, S.
PDB entry 8w2r: HIV-1 P5-IN intasome core
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-02-21
Authors: Li, M., Craigie, R.
PDB entry 8w2s: Cas9d Effector:sgRNA Binary Complex
Classification: IMMUNE SYSTEM/RNA
Source organism: Deltaproteobacteria
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-02-21
Authors: Fregoso Ocampo, R., Bravo, J.P.K., Taylor, D.W.
PDB entry 8w2t: Cryo-EM structure of human tankyrase 2 SAM-PARP filament - apo state (focused refinement map).
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2024-02-21
Authors: Malone, B.F., Zimmerman, J.L., Dow, L.E., Hite, R.K.
PDB entry 8w2u: Cryo-EM structure of human tankyrase 2 SAM-PARP filament -apo state (consensus map).
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2024-02-21
Authors: Malone, B.F., Zimmerman, J.L., Dow, L.E., Hite, R.K.
PDB entry 8w2v: Solution Structure of the CD28 hinge used in chimeric antigen receptor (CAR) T-cells
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-02-21
Authors: Folimonova, V., Chen, X., Walters, K.J.
PDB entry 8w2w: Structure of transthyretin synthetic mutation A120L
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-02-21
Authors: Yang, K., Sun, X., Ferguson, J.A., Stanfield, R.L., Wright, P.E.
PDB entry 8w2x: TAS-120 covalent structure with FGFR2
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2024-02-21
Authors: Hoffman, I.D., Nelson, K.J., Bensen, D.C., Bailey, J.B.
PDB entry 8w2y: Structure and interactions of HIV-1 gp41 CHR-NHR reverse hairpin constructs reveal molecular determinants of antiviral activity
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2024-02-21
Authors: McAndrew, R.P., Ralston, C.Y., Gochin, M.
PDB entry 8w2z: Cas9d 6bp R-loop Seed Complex
Classification: IMMUNE SYSTEM/RNA/DNA
Source organism: Deltaproteobacteria; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-02-21
Authors: Fregoso Ocampo, R., Bravo, J.P.K., Taylor, D.W.
PDB entry 8w30: Crystal structure of alpha-V beta-1 integrin headpiece in complex with TR01225179
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-02-21
Authors: Qin, L., Lane, W.
PDB entry 8w31: Crystal structure of parkin (R0RB):2pUb with activator compound
Classification: LIGASE
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-02-21
Authors: Sauve, V., Gehring, K.
PDB entry 8w32: Structure and interactions of HIV-1 gp41 CHR-NHR reverse hairpin constructs reveal molecular determinants of antiviral activity
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-02-21
Authors: McAndrew, R.P., Ralston, C.Y., Gochin, M.
PDB entry 8w33: Structure of McrD (methyl-coenzyme M reductase operon protein D) from Methanomassiliicoccus luminyensis
Classification: UNKNOWN FUNCTION
Source organism: Methanomassiliicoccus luminyensis B10
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-02-21
Authors: Sutherland-Smith, A.J., Carbone, V., Schofield, L.R., Ronimus, R.S.
PDB entry 8w34: HIV-1 intasome core assembled with wild-type integrase, 1F
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-02-21
Authors: Li, M., Craigie, R.
PDB entry 8w35: Aca2 from Pectobacterium phage ZF40 bound to RNA
Classification: RNA BINDING PROTEIN
Source organism: Pectobacterium phage ZF40; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-02-21
Authors: Wilkinson, M.E., Birkholz, N., Kimanius, D., Fineran, P.C.
PDB entry 8w36: rabbit actin in the absence of potassium
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.27 Å
Deposited: 2024-02-21
Authors: Volkmann, N.
PDB entry 8w37: Structure and interactions of HIV-1 gp41 CHR-NHR reverse hairpin constructs reveal molecular determinants of antiviral activity
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-02-22
Authors: McAndrew, R.P., Ralston, C.Y., Gochin, M.
PDB entry 8w38: TAS-120 covalent structure with FGFR2 molecular brake mutant
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-02-22
Authors: Hoffman, I.D., Nelson, K.J., Bensen, D.C., Bailey, J.B.
PDB entry 8w39: Vibrio vulnificus SmcR bound to the inhibitor PTSP
Classification: DNA BINDING PROTEIN
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-02-22
Authors: Paczkowski, J.E., Brockley, M.W., van Kessel, J.C.
PDB entry 8w3a: Crystal structure of Shewanella benthica Group 1 truncated hemoglobin C51S C71S variant with trans heme D
Classification: HEME-BINDING PROTEIN
Source organism: Shewanella benthica KT99
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-02-22
Authors: Lecomte, J.T.J., Schlessman, J.L., Schultz, T.D., Siegler, M.A.
PDB entry 8w3b: TAS-120 covalent structure with FGFR2 molecular brake mutant
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2024-02-22
Authors: Hoffman, I.D., Nelson, K.J., Bensen, D.C., Bailey, J.B.
PDB entry 8w3c: Crystal Structure of Enterovirus 68 3C Protease with AG7088 at 1.97 Angstroms
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: enterovirus D68
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2024-02-22
Authors: Azzolino, V.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 8w3d: TAS-120 covalent structure with FGFR2 molecular brake mutant
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-02-22
Authors: Hoffman, I.D., Nelson, K.J., Bensen, D.C., Bailey, J.B.
PDB entry 8w3e: Crystal structure of prefusion-stabilized RSV F protein UFCR1
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3f: Crystal structure of prefusion-stabilized RSV F protein UFCR1-P2-NQ
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3g: Crystal structure of prefusion-stabilized RSV F protein UFCR1(1TD0)
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3h: Crystal structure of prefusion-stabilized RSV F protein UFCR1-iSS
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3i: Crystal structure of prefusion-stabilized RSV F protein UFCR1-L2
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3j: Crystal structure of prefusion-stabilized RSV F protein UFCR2-iSS
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3k: Crystal structure of prefusion-stabilized RSV F protein UFCR2-iSS-NQ
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3l: Crystal structure of prefusion-stabilized RSV F protein UFCR2-iSS-P2-NQ
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3m: Crystal Structure of Enterovirus 68 3C Protease with AG7404 at 1.97 Angstroms
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: enterovirus D68
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2024-02-22
Authors: Azzolino, V.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 8w3n: Crystal structure of prefusion-stabilized RSV F protein UFCR3
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3o: Crystal structure of prefusion-stabilized RSV F protein UFCR3-GDQ
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3p: Crystal structure of prefusion-stabilized RSV F protein UFCR3-D(1TD0)
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3q: Crystal structure of prefusion-stabilized hMPV F protein UFCM1-P2-iSS
Classification: VIRAL PROTEIN
Source organism: human metapneumovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 5.99 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3r: Crystal structure of prefusion-stabilized RSV F protein UFCR2-iSS-P2-NQ in complex with A4 single-chain fragment variable
Classification: VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.02 Å
Deposited: 2024-02-22
Authors: Lee, Y.Z., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 8w3t: Crystal Structure of Enterovirus 68 3C Protease with GC376 at 1.98 Angstroms
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: enterovirus D68
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-02-22
Authors: Azzolino, V.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 8w3u: Structure of Epimerase Mth373 from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus
Classification: SUGAR BINDING PROTEIN
Source organism: Methanothermobacter thermautotrophicus str. Delta H
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-02-22
Authors: Carbone, V., Schofield, L.R., Sutherland-Smith, A.J., Ronimus, R.S.
PDB entry 8w3v: Crystal structure of human WDR41
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-02-22
Authors: Hutchinson, A., Dong, A., Li, Y., Seitova, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 8w3w: Crystal structure of IRAK4 in complex with compound 4
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.976 Å
Deposited: 2024-02-22
Authors: Han, S., Knafels, J.D.
PDB entry 8w3x: Crystal structure of IRAK4 in complex with compound 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.765 Å
Deposited: 2024-02-22
Authors: Han, S., Knafels, J.D.
PDB entry 8w3y: Crystal structure of a computationally designed metalloprotein containing the metal-chelating, fluorogenic, non-canonical amino acid 3-(8-hydroxyquinolin-3-yl)-L-alanine: apo form
Classification: FLUORESCENT PROTEIN, METAL BINDING PROTEIN
Source organism: Saccharolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-02-22
Authors: Kelly, P.I., Henderson, J.N., Mills, J.H.
PDB entry 8w3z: Crystal structure of a computationally designed metalloprotein containing the metal-chelating, fluorogenic, non-canonical amino acid 3-(8-hydroxyquinolin-3-yl)-L-alanine: magnesium-bound form
Classification: FLUORESCENT PROTEIN, METAL BINDING PROTEIN
Source organism: Saccharolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2024-02-22
Authors: Kelly, P.I., Henderson, J.N., Mills, J.H.
PDB entry 8w40: Crystal structure of a computationally designed metalloprotein containing the metal-chelating, fluorogenic, non-canonical amino acid 3-(8-hydroxyquinolin-3-yl)-L-alanine: zinc-bound form
Classification: FLUORESCENT PROTEIN, METAL BINDING PROTEIN
Source organism: Saccharolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-02-22
Authors: Kelly, P.I., Henderson, J.H., Mills, J.H.
PDB entry 8w41: Cryo-EM structure of Myosin VI in the autoinhibited state
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2023-08-23
Authors: Niu, F., Wei, Z.
PDB entry 8w42: X-ray crystal structure of V30M-TTR in complex with resveratrol
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-08-23
Authors: Yokoyama, T.
PDB entry 8w43: X-ray crystal structure of V30M-TTR in complex with piceatannol
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.302 Å
Deposited: 2023-08-23
Authors: Yokoyama, T.
PDB entry 8w44: X-ray crystal structure of V30M-TTR in complex with oxyresveratrol
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.399 Å
Deposited: 2023-08-23
Authors: Yokoyama, T.
PDB entry 8w45: X-ray crystal structure of V30M-TTR in complex with pinostilbene
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-08-23
Authors: Yokoyama, T.
PDB entry 8w46: X-ray crystal structure of V30M-TTR in complex with pterostilbene
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-08-23
Authors: Yokoyama, T.
PDB entry 8w47: X-ray crystal structure of V30M-TTR in complex with isorhapontigenin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-08-23
Authors: Yokoyama, T.
PDB entry 8w48: Neutron and X-ray joint structure of WT-TTR in complex with piceatannol
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2023-08-23
Authors: Yokoyama, T., Kusaka, K., Fujiwara, S.
PDB entry 8w49: mouse isocitrate dehydrogenase with isocitrate and magnesium
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-08-23
Authors: Kang, B.S., Cho, H.Y.
PDB entry 8w4a: membrane proteins
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2023-08-23
Authors: Yu, J., Ge, J.P., Xu, R.S.
PDB entry 8w4b: The sigma-1 receptor from Xenopus laevis in complex with progesterone by co-crystallization
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.152 Å
Deposited: 2023-08-23
Authors: Xiao, Y., Fu, C., Sun, Z., Zhou, X.
PDB entry 8w4c: The sigma-1 receptor from Xenopus laevis in complex with progesterone by soaking
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.676 Å
Deposited: 2023-08-23
Authors: Xiao, Y., Fu, C., Sun, Z., Zhou, X.
PDB entry 8w4d: Crystal structure of the sigma-1 receptor from Xenopus laevis in the absence of known ligands
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.173 Å
Deposited: 2023-08-23
Authors: Xiao, Y., Fu, C., Sun, Z., Zhou, X.
PDB entry 8w4e: Crystal structure of the sigma-1 receptor from Xenopus laevis in the absence of known ligands (C2 form)
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.805 Å
Deposited: 2023-08-23
Authors: Xiao, Y., Fu, C., Sun, Z., Zhou, X.
PDB entry 8w4f: SARS-CoV-2 spike protein in complex with a trivalent nanobody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-08-24
Authors: Jiang, X.Y., Qian, J.Q., Zhu, H.X., Qin, Q., Huang, Q.
PDB entry 8w4g: Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105
Classification: HYDROLASE
Source organism: Streptococcus equi subsp. zooepidemicus Sz105
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-08-24
Authors: Guan, H.H., Lin, C.C., Hsieh, Y.C., Chen, C.J.
PDB entry 8w4i: Crystal structure of EndoSz mutant D234M in space group P21
Classification: HYDROLASE
Source organism: Streptococcus equi subsp. zooepidemicus Sz105
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-08-24
Authors: Guan, H.H., Lin, C.C., Hsieh, Y.C., Chen, C.J.
PDB entry 8w4j: Cryo-EM structure of the KLHL22 E3 ligase bound to human glutamate dehydrogenase I
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2023-08-24
Authors: Su, M.-Y., Su, M.-Y.