LiteFold/PDB huggingface dataset:
PDB entry 9qop: Binary complex of human Importin-9 with one homodimer of Akirin-2
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-03-26
Authors: Brunner, H.L., Grundmann, L., David, H.
PDB entry 9qor: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qos: APH(3')-IIb with an inhibitor
Classification: ANTIBIOTIC
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qot: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qou: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qov: Crystal structure of [2Fe-2S]b D4A-FNR of A. fischeri
Classification: TRANSCRIPTION
Source organism: Aliivibrio fischeri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2025-03-26
Authors: Volbeda, A., Fontecilla-Camps, J.C., Rohac, R.
PDB entry 9qow: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qox: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qoy: Pseudomonas aeruginosa APH(3"")-IIb - Wild Type
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.792 Å
Deposited: 2025-03-26
Authors: Kowalewski, J., Tomaszczyk, M., Guichou, J.F., Gelin, M., Labesse, G., Lionne, C.
PDB entry 9qoz: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qp0: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qp1: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qp2: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qp3: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qp5: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qp6: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qp7: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qp8: Diels Alderase Cyc15b
Classification: LIGASE
Source organism: Streptomyces sp. NL15-2K
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-03-26
Authors: Yang, S., Kisa, D., Basle, A., Race, P.R.
PDB entry 9qp9: APH(2'')-IVa with a fragment
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qpa: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qpb: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2025-03-26
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qpc: DNA polymerase with inhibitor
Classification: DNA BINDING PROTEIN
Source organism: Enterococcus faecium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-03-26
Authors: Lamers, M.H., Urem, M., Smits, W.K.
PDB entry 9qpd: APH(2'')-IVa with a fragment
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-03-27
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qpe: Hcp3-Tce1 complex from the Pseudomonas aeruginosa Type VI Secretion System
Classification: PROTEIN TRANSPORT
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-03-27
Authors: Paracuellos, P., Bexter, A., Patkowski, J.B., Omelchenko, O., Mace, K., Ilangovan, A., Filloux, A., Costa, T.R.D.
PDB entry 9qpf: Solution structure of Sox2 DBD
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2025-03-27
Authors: Orsetti, A., van Ingen, H.
PDB entry 9qpg: Isopenicillin N synthase in complex with Fe and IPN
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2025-03-27
Authors: Rabe, P., Schofield, C.J.
PDB entry 9qph: Isopenicillin N synthase in complex with Fe and IPN using tr-SFX
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-03-27
Authors: Rabe, P., Schofield, C.J., Stead, A.
PDB entry 9qpi: Isopenicillin N synthase in complex with Fe and ACV
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-03-27
Authors: Rabe, P., Schofield, C.J., Stead, A.
PDB entry 9qpj: Isopenicillin N synthase in complex with Fe and IPN using tr-SSX
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-03-27
Authors: Rabe, P., Schofield, C.J., Stead, A.
PDB entry 9qpk: E.coli TalB mutant E96Q, F178Y, R300E
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2025-03-27
Authors: Soderholm, A., Roos, A., Widersten, M.
PDB entry 9qpl: APH(2'')-IVa with an inhibitor
Classification: ANTIBIOTIC
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2025-03-27
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qpm: BtuJ1 (BT_1491) bound to cyanocobalamin
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2025-03-27
Authors: Abellon-Ruiz, J., van den Berg, B.
PDB entry 9qpn: BtuJ1 (BT_1491) bound to dicyanocobinamide
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2025-03-27
Authors: Abellon-Ruiz, J., van den Berg, B.
PDB entry 9qpo: CryoEM structure of human MATa2 in complex with MATBv2 at 2.6 A resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-03-27
Authors: Khaja, F., Antonyuk, S.V., Muench, S.P., Hasnain, S.S.
PDB entry 9qpp: CryoEM structure of human MATa2 in complex with MAT2B isoform v1 at 2.6 A resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-03-27
Authors: Khaja, F., Antonyuk, S.V., Muench, S.P., Hasnain, S.S.
PDB entry 9qpq: The structure of the COPI leaf bound to GOLPH3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2025-03-28
Authors: Taylor, R.J., Tagiltsev, G., Ciazynska, K.A., Briggs, J.A.G.
PDB entry 9qpr: Single particle cryo-EM structure of the multidrug efflux pump MdtF from Escherichia coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2025-03-28
Authors: Lawrence, R., Adams, C., Sousa, J.S., Ahdash, Z., Reading, E.
PDB entry 9qps: Single particle cryo-EM structure of MdtF V610F
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2025-03-28
Authors: Lawrence, R., Adams, C., Sousa, J.S., Ahdash, Z., Reading, E.
PDB entry 9qpt: Single particle cryo-EM structure of MdtF V610F with bound Rhodamine 6G
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-03-28
Authors: Lawrence, R., Adams, C., Sousa, J.S., Ahdash, Z., Reading, E.
PDB entry 9qpu: Structure of human butyrylcholinesterase inhibited by the Ellman's reaction product, 2-[(3-carboxy-4-nitrophenyl)disulfanyl]ethyl-trimethylazanium
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-03-29
Authors: Brazzolotto, X., Stojan, J.
PDB entry 9qpv: Pseudomonas aeruginosa Ptx2 toxin
Classification: TOXIN
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-03-29
Authors: Shatskiy, D., Belyy, A.
PDB entry 9qpw: GluA4, resting state, structure of TMD/LBD
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-03-29
Authors: Vega-Gutierrez, C., Herguedas, B.
PDB entry 9qpx: BRCA1 BRCT tandem repeat with RNA polymerase II pSer5-CTD peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-03-30
Authors: Houser, J., Klapstova, V., Sebesta, M.
PDB entry 9qpy: Structure of the Complement classical and lectin pathway C3 convertase
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2025-03-31
Authors: De la O Becerra, K.I., Brondijk, T.H.C., Gros, P.
PDB entry 9qpz: KRAS-WT(1-169) - GDP IN COMPLEX WITH compound (R)-1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.312 Å
Deposited: 2025-03-31
Authors: Ostermann, N.
PDB entry 9qq0: KRAS-G12D(1-169) - GDP IN covalent COMPLEX WITH compound (3R,4R)-3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.546 Å
Deposited: 2025-03-31
Authors: Ostermann, N.
PDB entry 9qq1: KRAS-G12D(1-169) - GDP IN covalent COMPLEX with compound (3S,4R)-8
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-03-31
Authors: Ostermann, N.
PDB entry 9qq2: Crystal structure of human carbonic anhydrase VII in complex with a benzenesulfonamide derivative containing the duloxetine moiety.
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2025-03-31
Authors: Di Fiore, A., D'Ambrosio, K., De Simone, G.
PDB entry 9qq3: Crystal structure of human carbonic anhydrase VII in complex with a benzenesufonamide derivative containing the duloxetine moiety
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-03-31
Authors: D'Ambrosio, K., Di Fiore, A., De Simone, G.
PDB entry 9qq4: Mini-bacterioferritin from Candidatus Methanoperedens species BLZ2 as isolated form at 1.07-A resolution
Classification: OXIDOREDUCTASE
Source organism: Candidatus Methanoperedens sp. BLZ2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2025-03-31
Authors: Wissink, M., Wagner, T.
PDB entry 9qq5: Mini-bacterioferritin from Candidatus Methanoperedens species BLZ2 in a partially oxidized state
Classification: OXIDOREDUCTASE
Source organism: Candidatus Methanoperedens sp. BLZ2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2025-03-31
Authors: Wissink, M., Wagner, T.
PDB entry 9qq6: Structure of the Azotobacter vinelandii NifL-NifA complex
Classification: GENE REGULATION
Source organism: Azotobacter vinelandii DJ
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.45 Å
Deposited: 2025-03-31
Authors: Bueno Batista, M., Richardson, J., Webster, M.W., Ghilarov, D., Peters, J.W., Lawson, D.M., Dixon, R.
PDB entry 9qq7: Crystal structure of the relaxase domain of RelpLS20, Se-Met derivative
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-03-31
Authors: Crespo, I., Boer, D.R.
PDB entry 9qq8: Crystal structure of the catalytic N-terminal domain of the relaxase of plasmid pLS20 in complex with the core region
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis subsp. natto; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2025-03-31
Authors: Crespo, I., Boer, D.R.
PDB entry 9qq9: Crystal structure of the relaxase domain of RelpLS20, prototype of MobL family of relaxases
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis subsp. natto
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2025-03-31
Authors: Crespo, I., Boer, D.R.
PDB entry 9qqa: Ternary complex of translating ribosome, NAC and NMT1
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-03-31
Authors: Echeverria, B., Jaskolowski, M., Scaiola, A., Ban, N.
PDB entry 9qqb: Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2025-03-31
Authors: Echeverria, B., Jaskolowski, M., Scaiola, A., Ban, N.
PDB entry 9qqc: Acoustofluidic Sample Delivery System for Serial Crystallography, Thaumatin with acoustic ON
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-03-31
Authors: Bjelcic, M., Sellberg, J., Rajendran, K.V., Casadei, C., Viklund, T.E.
PDB entry 9qqd: cryoEM structure of Bovine Serum Albumin
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-03-31
Authors: Manikandan, K., Jason, V.R.
PDB entry 9qqe: Cryo-EM structure of the SN230G6 Fab - HLA-A*02:01 human alloantibody-HLA complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2025-03-31
Authors: Zampieri, V., Priddey, A., Schneider, S., Heidt, S., Kosmoliaptsis, V., Marquez, J.A.
PDB entry 9qqf: Cryo-EM structure of the WIM8E5 Fab - HLA-A*11:01 human alloantibody-HLA complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2025-03-31
Authors: Zampieri, V., Priddey, A., Humm, A.S., Pellegrini, E., Heidt, S., Kosmoliaptsis, V., Marquez, J.A.
PDB entry 9qqg: Acoustofluidic Sample Delivery System for Serial Crystallography, Thaumatin with acoustic OFF
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-03-31
Authors: Bjelcic, M., Sellberg, J., Rajendran, K.V., Casadei, C., Viklund, T.E.
PDB entry 9qqh: Mini-bacterioferritin from Candidatus Methanoperedens species BLZ2 oxidized then chemically reduced
Classification: OXIDOREDUCTASE
Source organism: Candidatus Methanoperedens sp. BLZ2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2025-03-31
Authors: Wissink, M., Wagner, T.
PDB entry 9qqi: Mini-bacterioferritin from Candidatus Methanoperedens species BLZ2 untreated control of a redox cycling experiment
Classification: OXIDOREDUCTASE
Source organism: Candidatus Methanoperedens sp. BLZ2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2025-03-31
Authors: Wissink, M., Wagner, T.
PDB entry 9qqj: ERK2 with an inhibitor
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2025-04-01
Authors: Guichou, J.F., Gelin, M., Tomaszczyk, M., Kowalewski, J., Lionne, C.
PDB entry 9qqk: GH161 phosphorylase in complex with beta-1,3 glucooligosaccharide
Classification: CYTOSOLIC PROTEIN
Source organism: gut metagenome
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2025-04-01
Authors: Cooper, N., Cioci, G., Ladeveze, S., Potocki-Veronese, G., Moulis, C., Remaud-Simeon, M.
PDB entry 9qql: Mouse RPS15 P131 Mutant Ribosome POST translocation state
Classification: RIBOSOME
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2025-04-01
Authors: Santo, P.E., Astier, A., Plisson-Chastang, C.
PDB entry 9qqm: Auxin transporter-like protein 3 (LAX3) in the inward open state, apo
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2025-04-01
Authors: Amsinck, B.L., Ung, K.L., Stokes, D.L., Pedersen, B.P.
PDB entry 9qqn: Junin virus GP1-GP2 heterodimer in complex with Fab of JUN1
Classification: VIRAL PROTEIN
Source organism: Mammarenavirus juninense; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2025-04-01
Authors: Bowden, T.A., Paesen, G.C.
PDB entry 9qqo: Crystal structure of a beta-glycosidase from Prevotella sp.
Classification: HYDROLASE
Source organism: Prevotella
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-01
Authors: Schwartz, M., Neiers, F.
PDB entry 9qqp: Mouse Ribosome rotated-2 PRE state
Classification: RIBOSOME
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-04-01
Authors: Santo, P.E., Astier, A., Plisson-Chastang, C.
PDB entry 9qqq: Cryo-EM structure of SKM-70S ribosomal stalled complex in the major state (vacant A-site, canon)
Classification: RIBOSOME
Source organism: Escherichia coli B; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.26 Å
Deposited: 2025-04-01
Authors: Morici, M., Corazza, M., Safdari, H.A., Wilson, D.N.
PDB entry 9qqr: S.aureus ClpC decameric resting state
Classification: CHAPERONE
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2025-04-02
Authors: Engelhardt, L., Carroni, M.
PDB entry 9qqt: Methyl-coenzyme M reductase of ANME-2d Candidatus Methanoperedens Vercelli Strain 1 from a bioreactor enrichment culture
Classification: TRANSFERASE
Source organism: Candidatus Methanoperedens sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 0.98 Å
Deposited: 2025-04-02
Authors: Mueller, M.-C., Wagner, T.
PDB entry 9qqu: Crystal structure of an engineered TPR domain in complex with the HSP90 peptide MEEVD
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2025-04-02
Authors: Pinotis, N., Bell, R., Williams, M.A.
PDB entry 9qqv: Structure of the F13 protein of Vaccinia virus in complex with G243-1720
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2025-04-02
Authors: Vernuccio, R., Guardado-Calvo, P.
PDB entry 9qqw: EM structure of Rec-controlled histidine kinase LvrB, BeF3-activated
Classification: SIGNALING PROTEIN
Source organism: Leptospira interrogans serovar Copenhageni
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.92 Å
Deposited: 2025-04-02
Authors: Agustoni, E., Mechaly, A., Rizza, J.D., Beriashvili, D., Pluhackova, K., Isaikina, P., Trajtenberg, F., Muntener, T., Wunder, E., Ko, A., Schirmer, T., Buschiazzo, A., Hiller, S.
PDB entry 9qqx: Crystal Structure of 54k bound to CK2a
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-04-02
Authors: Brear, P., Glossop, P., Pandey, S., Hyvonen, M., Spring, D., Butt, R., Cawkill, D.
PDB entry 9qqy: Dye-decolourising peroxidase DtpB XRPP experiment (1000 kGy)-PUMP
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-02
Authors: Lucic, M., Worrall, J.A.R., Hough, M.A., Maly, M., Owen, R.L.
PDB entry 9qr1: Methyl-coenzyme M reductase of ANME-2d Candidatus Methanoperedens sp. BLZ2 from a bioreactor enrichment culture
Classification: TRANSFERASE
Source organism: Candidatus Methanoperedens sp. BLZ2
Experimental method: X-RAY DIFFRACTION
Resolution: 0.98 Å
Deposited: 2025-04-02
Authors: Mueller, M.-C., Wagner, T.
PDB entry 9qr2: EM structure of Rec-controlled histidine kinase LvrB
Classification: SIGNALING PROTEIN
Source organism: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.24 Å
Deposited: 2025-04-02
Authors: Agustino, E., Buschiazzo, A., Hiller, S., Beriashvili, D.
PDB entry 9qr3: Methyl-coenzyme M reductase of an ANME-2c from a microbial enrichment
Classification: TRANSFERASE
Source organism: Candidatus Methanogasteraceae archaeon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2025-04-02
Authors: Mueller, M.-C., Wagner, T.
PDB entry 9qr4: InlB392_T336Y: T336Y variant of Listeria monocytogenes InlB (internalin B) residues 36-392
Classification: CELL INVASION
Source organism: Listeria monocytogenes EGD-e
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-04-03
Authors: Geerds, C., Niemann, H.H.
PDB entry 9qr5: InlB392_V333E: V333E variant of Listeria monocytogenes InlB (internalin B) residues 36-392
Classification: CELL INVASION
Source organism: Listeria monocytogenes EGD-e
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-04-03
Authors: Geerds, C., Niemann, H.H.
PDB entry 9qr6: CryoEM structure of the tetrahedral M42 aminopeptidase from M. jannaschii
Classification: CYTOSOLIC PROTEIN
Source organism: Methanocaldococcus jannaschii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2025-04-03
Authors: Atalah, J., Basbous, H., Girard, E., Effantin, E., Schoehn, G., Franzetti, B.
PDB entry 9qr7: Structural characterization of a N-acetylmuramic acid-binding site in human RNase2
Classification: PROTEIN BINDING
Source organism: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2025-04-03
Authors: Xincheng, K., Jiarui, L., Prats-Ejarque, G., Boix, E.
PDB entry 9qr8: Gliadin degrading prolyl endopeptidase Celiacase (neprosin C334V)
Classification: HYDROLASE
Source organism: Nepenthes alata x Nepenthes ventricosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-03
Authors: Rodriguez-Banqueri, A., Eckhard, U., Gomis-Ruth, F.X.
PDB entry 9qra: SARS-CoV-2 nsp14 with 1-(4-methylphenyl)-2-(2-methylsulfanyl-4,5-dihydroimidazol-1-yl)ethanone
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2025-04-03
Authors: Shi, X., Kozielski, F., Wang, Q., Dong, D.
PDB entry 9qrb: SARS-CoV-2 nsp14 with 2,5-dichlorothiophene-3-sulfonamide
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2025-04-03
Authors: Shi, X., Kozielski, F., Wang, Q., Dong, D.
PDB entry 9qrc: SARS-CoV-2 nsp14 with 6-methyl-2-[(4-methylphenyl)methyl]pyridazin-3-one
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-04-03
Authors: Shi, X., Kozielski, F., Wang, Q., Dong, D.
PDB entry 9qrd: SARS-CoV-2 nsp14 with ethyl 2-(1H-indol-3-yl)acetate
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2025-04-03
Authors: Shi, X., Kozielski, F., Wang, Q., Dong, D.
PDB entry 9qre: SARS-CoV-2 nsp14 with 2,5-dimethylpyrazol-3-amine
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-04-03
Authors: Shi, X., Kozielski, F., Wang, Q., Dong, D.
PDB entry 9qrf: Ancestral protein of diDNase
Classification: DE NOVO PROTEIN
Source organism: Synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-04-03
Authors: Mortensen, S., Burnim, A., Dufault-Thompson, K., Jiang, X., Lipka, A.E., Sondermann, H.
PDB entry 9qrg: Crystal structure of mutant NtA622L in complex with NADP+ and Nicotinamide
Classification: PLANT PROTEIN
Source organism: Nicotiana tabacum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-04-03
Authors: Mokos, D., Daniel, B.
PDB entry 9qrh: Protein Kinase CK2 and bivalent inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2025-04-03
Authors: Krimm, I., Gelin, M., Guichou, J.F., Grenier, D.
PDB entry 9qri: Protein Kinase CK2 and bivalent inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-04-03
Authors: Krimm, I., Gelin, M., Guichou, J.F., Grenier, D.
PDB entry 9qrj: Protein Kinase CK2 and bivalent inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2025-04-03
Authors: Krimm, I., Gelin, M., Guichou, J.F., Grenier, D.
PDB entry 9qrk: Structure of BromoCatch: Brd2BD2 L383A,D434C in complex with MR116.
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-04-03
Authors: Rodriguez-Rios, M., Nakasone, M., Ciulli, A.
PDB entry 9qrl: DNA polymerase with inhibitor #2
Classification: DNA BINDING PROTEIN
Source organism: Enterococcus faecium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-03
Authors: Lamers, M.H., Urem, M., Smits, W.K.
PDB entry 9qrm: X-ray structure of Kp32gp38 in complex with K21 pyr5
Classification: VIRAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-03
Authors: Napolitano, V., Squeglia, F., Privitera, M., Berisio, R.
PDB entry 9qrn: DNA polymerase without DNA or inhibitor
Classification: DNA BINDING PROTEIN
Source organism: Enterococcus faecium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-03
Authors: Lamers, M.H., Urem, M., Smits, W.K.
PDB entry 9qrp: Thermus thermophilus seryl-tRNA synthetase bound to tRNA(ser)(GGA) and seryl-adenylate analogue.
Classification: RNA BINDING PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-04-04
Authors: Cusack, S.
PDB entry 9qrs: Crystal structure of CERK6 extracellular domain
Classification: PLANT PROTEIN
Source organism: Lotus japonicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2025-04-04
Authors: Cheng, J.X.J., Gysel, K., Stougaard, J., Andersen, K.R.
PDB entry 9qrt: FSP1 (tetrapod ancestor; L323A mutant) bound to FAD and NAD+ and compound 2
Classification: OXIDOREDUCTASE
Source organism: Mammalia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-04-04
Authors: Cecchini, D., Mattevi, A.
PDB entry 9qrv: Crystal Structure of an anti-VWF CK Domain Fab in Complex with the C-Terminal CK Domain of Cynomolgus Monkey von Willebrand Factor.
Classification: BLOOD CLOTTING
Source organism: Macaca fascicularis; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-04
Authors: Bak-Thomsen, T., Hager, M., Carnbring Deemand, A., Gluver Norgaard, H., Kempf-Amkaer, L., Anthonsen, A., Nielsen, R., Naretto, A., Kelpsas, V., Sabljic, I., Rose, N., Ostergaard, H., Gandhi, P., Walse, B.
PDB entry 9qrw: S.aureus ClpC dodecameric resting state
Classification: CHAPERONE
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2025-04-04
Authors: Engelhardt, L., Carroni, M.
PDB entry 9qs1: Tetrapodal ancestor of L-amino acid oxidases
Classification: OXIDOREDUCTASE
Source organism: Tetrapoda
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-04
Authors: Massari, M., Mattevi, A.
PDB entry 9qs2: Crystal structure of Zika Virus NS2B-NS3 protease in complex with Z100582766
Classification: VIRAL PROTEIN
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-04-04
Authors: Benz, L.S., Becker, F., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qs5: SARS-CoV-2 nsp14 with 5-(thiophen-2-ylmethylamino)-3H-1,3,4-thiadiazole-2-thione
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-04-04
Authors: Shi, X., Kozielski, F., Wang, Q., Dong, D.
PDB entry 9qs7: AcuB,Acetoin utilization protein
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2025-04-04
Authors: Zheng, L.J., Bange, G.
PDB entry 9qs8: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z2997505083
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2025-04-04
Authors: Becker, F., Benz, L.S., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qs9: Structure and mechanism of the broad spectrum CRISPR-associated ring nuclease Crn4
Classification: CELL INVASION
Source organism: Actinomyces procaprae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.441 Å
Deposited: 2025-04-04
Authors: McMahon, S.A., Chi, H., Hoikkala, V., Gloster, T.M., White, M.F.
PDB entry 9qsa: Mouse Ribosome rotated-1 PRE state
Classification: RIBOSOME
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-04-04
Authors: Santo, P.E., Astier, A., Plisson-Chastang, C.
PDB entry 9qsc: apPol-DNA-nucleotide complex consensus refinement
Classification: REPLICATION
Source organism: DNA molecule; Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-04
Authors: Lahiri, I., Kumari, A.
PDB entry 9qsd: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z854627136
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2025-04-04
Authors: Becker, F., Benz, L.S., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qse: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z30008604
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2025-04-04
Authors: Becker, F., Benz, L.S., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qsf: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z2858787682
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-04
Authors: Becker, F., Benz, L.S., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qsg: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z1280094148
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2025-04-04
Authors: Becker, F., Benz, L.S., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qsi: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z166687084
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2025-04-04
Authors: Becker, F., Benz, L.S., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qsj: Cryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.
Classification: RIBOSOME
Source organism: Escherichia coli B; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2025-04-05
Authors: Morici, M., Corazza, M., Safdari, H.A., Wilson, D.N.
PDB entry 9qsk: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z741560256
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2025-04-05
Authors: Becker, F., Benz, L.S., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qsl: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z4666192264
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2025-04-05
Authors: Becker, F., Benz, L.S., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qsm: small molecule inhibitor in complex with PD-L1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-04-05
Authors: Muszak, D., Kocik-Krol, J., Zaber, J., Kruc, O., Palej, U., Fijolkowska, K., Maslanka, A., Magiera-Mularz, K., Plewka, J., Stec, M., Siedlar, M., Musielak, B., Kitel, R., Skalniak, L., Surmiak, E.
PDB entry 9qsn: Tetrapodal ancestor of L-amino acid oxidases co-crystallized with indole-3-acetic acid
Classification: OXIDOREDUCTASE
Source organism: Tetrapoda
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2025-04-06
Authors: Massari, M., Mattevi, A.
PDB entry 9qso: Tetrapodal ancestor of L-amino acid oxidases co-crystallised with indole-3-pyruvate
Classification: OXIDOREDUCTASE
Source organism: Tetrapoda
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2025-04-06
Authors: Massari, M., Mattevi, A.
PDB entry 9qsp: Crystal structure of Zika Virus NS2B-NS3 protease in complex with Z2242050769
Classification: VIRAL PROTEIN
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2025-04-06
Authors: Benz, L.S., Becker, F., Janssen, P., Fuesser, F.T., Weiss, M.S., Kuemmel, D., Koch, O.
PDB entry 9qsq: Mn(III)-substituted Wells-Dawson binding to Hen Egg-White Lysozyme (HEWL)
Classification: PROTEIN BINDING
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2025-04-07
Authors: Moussawi, M.A.
PDB entry 9qsr: Protein Kinase CK2 and bivalent inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2025-04-07
Authors: Krimm, I., Gelin, M., Guichou, J.F., Grenier, D.
PDB entry 9qss: Protein Kinase CK2 and bivalent inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2025-04-07
Authors: Krimm, I., Gelin, M., Guichou, J.F., Grenier, D.
PDB entry 9qst: Protein Kinase CK2 and bivalent inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-04-07
Authors: Krimm, I., Gelin, M., Guichou, J.F., Grenier, D.
PDB entry 9qsu: Protein Kinase CK2 and bivalent inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2025-04-07
Authors: Krimm, I., Gelin, M., Guichou, J.F., Grenier, D.
PDB entry 9qsv: Protein Kinase CK2 and bivalent inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2025-04-07
Authors: Krimm, I., Gelin, M., Guichou, J.F., Grenier, D.
PDB entry 9qsw: Crystal structure of an NtA622L variant in complex with NADP+ and Nicotinic acid
Classification: PLANT PROTEIN
Source organism: Nicotiana tabacum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2025-04-07
Authors: Mokos, D., Daniel, B.
PDB entry 9qsx: Cryo-EM structure of aquaporin 3 at pH 8.0
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-07
Authors: Huang, P., Venskutonyte, R., Lindkvist-Petersson, K.
PDB entry 9qsy: Cryo-EM structure of aquaporin 3 at pH 5.5
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-07
Authors: Huang, P., Venskutonyte, R., Lindkvist-Petersson, K.
PDB entry 9qsz: Cryo-EM structure of aquaporin 3 at pH 8.0 with hydrogen peroxide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-04-07
Authors: Huang, P., Venskutonyte, R., Lindkvist-Petersson, K.
PDB entry 9qt0: DNA-binding bacterial histone HLp from Leptospira perolatii
Classification: DNA BINDING PROTEIN
Source organism: Leptospira perolatii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-04-07
Authors: Hu, Y., Albrecht, R., Hartmann, M.D.
PDB entry 9qt1: Bacterial histone HLp from Leptospira perolatii bound to DNA
Classification: DNA BINDING PROTEIN
Source organism: DNA molecule; Leptospira perolatii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-07
Authors: Hu, Y., Albrecht, R., Hartmann, M.D.
PDB entry 9qt2: Bacterial histone HLp from Leptospira perolatii bound to DNA
Classification: DNA BINDING PROTEIN
Source organism: Leptospira perolatii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-07
Authors: Hu, Y., Albrecht, R., Hartmann, M.D.
PDB entry 9qt3: Structure of vaccinia virus A26 (residues 1-397) in complex with Fab 8M2110
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Lama glama; Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2025-04-07
Authors: Guardado-Calvo, P., Battini, L.
PDB entry 9qt4: CryoEM structure of Arabidopsis TIR-NLR WRR4A tetramer in complex with effector CCG40 (focused refinement)
Classification: PLANT PROTEIN
Source organism: Albugo candida; Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2025-04-07
Authors: Zhao, H., Lukoyanova, N., Selvaraj, M., Jones, J.
PDB entry 9qt5: Structure of the 50S ribosomal subunit from the antibiotic-producing bacterium Streptomyces fradiae
Classification: RIBOSOME
Source organism: Streptomyces fradiae ATCC 10745 = DSM 40063
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2025-04-07
Authors: Ekemezie, C.L., Melnikov, S.V.
PDB entry 9qt6: Crystal structure of HPK1 T165E/S171E in complex with pyrazine carboxamide inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2025-04-08
Authors: Schimpl, M.
PDB entry 9qt7: Crystal structure of affitin C10 fused to a coiled-coil domain in complex with a quinoline oligoamide foldamer
Classification: DE NOVO PROTEIN
Source organism: Mus musculus; Sulfolobus acidocaldarius; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-04-08
Authors: Morozov, V., Wang, L., Kwon, S., Douat, C., Huc, I.
PDB entry 9qt9: Cryo-EM structure of the core of the Arabidopsis thaliana UBR4/DI19/CALM1 complex
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2025-04-08
Authors: Grabarczyk, D.B., Clausen, T.
PDB entry 9qtb: Apo form of the L protein from Rift Valley Fever Virus
Classification: VIRAL PROTEIN
Source organism: Rift valley fever virus (STRAIN ZH-548 M12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-04-08
Authors: Kral, M., Das, A.R., Kotacka, T., Blahosova, A., Hodek, J., Konvalinka, J., Demo, G., Kozisek, M.
PDB entry 9qte: Simkania negevensis CE-clan virulence factor SnCE1 wildtype
Classification: HYDROLASE
Source organism: Simkania negevensis Z
Experimental method: X-RAY DIFFRACTION
Resolution: 2.821 Å
Deposited: 2025-04-08
Authors: Schmoeker, O., Girbardt, B., Palm, G.J., Hoppen, J., Schulze, S., Lammers, M.
PDB entry 9qtf: Simkania negevensis CE-clan virulence factor SnCE1 C256A catalytically inactive mutant
Classification: HYDROLASE
Source organism: Simkania negevensis Z
Experimental method: X-RAY DIFFRACTION
Resolution: 2.205 Å
Deposited: 2025-04-08
Authors: Schmoeker, O., Girbardt, B., Palm, G.J., Hoppen, J., Schulze, S., Lammers, M.
PDB entry 9qtg: Simkania negevensis CE-clan virulence factor SnCE1 in complex with hsSUMO1
Classification: HYDROLASE
Source organism: Homo sapiens; Simkania negevensis Z
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2025-04-08
Authors: Schmoeker, O., Girbardt, B., Palm, G.J., Hoppen, J., Schulze, S., Lammers, M.
PDB entry 9qth: Inquilinus NrnC
Classification: HYDROLASE
Source organism: Inquilinus limosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-08
Authors: Mortensen, S., Burnim, A., Dufault-Thompson, K., Jiang, X., Lipka, A.E., Sondermann, H.
PDB entry 9qtj: Structure of Oceanobacillus iheyensis group II intron domains D1-D6
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2025-04-09
Authors: Jadhav, S.S., Nigro, M., Marcia, M.
PDB entry 9qtl: SFX crystal structure of hen egg-white lysozyme (HEWL) using a guanosine derivative hydrogel as crystal matrix
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-04-09
Authors: Rios-Santacruz, R., De Zitter, E., Coquelle, N., Colletier, J.P., Schiro, G., Weik, M.
PDB entry 9qtn: Human alpha7 nicotinic receptor in complex with the F1 nanobody
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.28 Å
Deposited: 2025-04-09
Authors: Barilone, N., Vangelatou, M., Marouf, F.Z., Dejean de la Batie, G., Ayme, G., Lafaye, P., Corringer, P.-J., Prevost, M.S.
PDB entry 9qto: Human alpha7 nicotinic receptor in complex with the E6 nanobody
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.16 Å
Deposited: 2025-04-09
Authors: Barilone, N., Vangelatou, M., Marouf, F.Z., Dejean de la Batie, G., Ayme, G., Lafaye, P., Corringer, P.-J., Prevost, M.S.
PDB entry 9qtp: Structure of the energy converting methyltransferase (Mtr) of Methanosarcina mazei in complex with a novel protein binder
Classification: MEMBRANE PROTEIN
Source organism: Methanosarcina mazei Go1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-09
Authors: Reif-Trauttmansdorff, T., Herdering, E., Bohn, S., Pascoa, T.C., Kumar, A., Zimmer, E., Schmitz, R.A., Schuller, J.M.
PDB entry 9qtq: Structure of the energy converting methyltransferase (Mtr) of Methanosarcina mazei in complex with a novel protein binder
Classification: MEMBRANE PROTEIN
Source organism: Methanosarcina mazei Go1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2025-04-09
Authors: Reif-Trauttmansdorff, T., Herdering, E., Bohn, S., Pascoa, T.C., Kumar, A., Zimmer, E., Schmitz, R.A., Schuller, J.M.
PDB entry 9qtr: Structure of the energy converting methyltransferase (Mtr) of Methanosarcina mazei in complex with a novel protein binder
Classification: MEMBRANE PROTEIN
Source organism: Methanosarcina mazei Go1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-04-09
Authors: Reif-Trauttmansdorff, T., Herdering, E., Bohn, S., Pascoa, T.C., Kumar, A., Zimmer, E., Schmitz, R.A., Schuller, J.M.
PDB entry 9qts: Structure of the energy converting methyltransferase (Mtr) of Methanosarcina mazei in complex with a novel protein binder
Classification: MEMBRANE PROTEIN
Source organism: Methanosarcina mazei Go1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2025-04-09
Authors: Reif-Trauttmansdorff, T., Herdering, E., Bohn, S., Pascoa, T.C., Kumar, A., Zimmer, E., Schmitz, R.A., Schuller, J.M.
PDB entry 9qtu: human PAN2-PAN3 deadenylase complex in the apo state
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2025-04-09
Authors: Albrecht, J.C., Reitinger, T., Basquin, J., Schuessler, S., Schaefer, I.B., Conti, E.
PDB entry 9qu1: Crystal structure of the human RalGAPA2 N-terminal domain with human kappaB-Ras1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2025-04-09
Authors: Rasche, R., Kuemmel, D.
PDB entry 9qu3: Cryo-EM structure of the human choline transporter-like protein hCTL1 in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-10
Authors: Driller, J.H., Nel, L., Pedersen, B.P.
PDB entry 9qu4: Cryo-EM structure of the inward-open choline-bound state of choline/ethanolamine transporter FLVCR2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2025-04-10
Authors: Driller, J.H., Nel, L., Pedersen, B.P.
PDB entry 9qu6: Cryo-EM structure of Oceanobacillus iheyensis group II intron domains D1-D5
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-10
Authors: Jadhav, S.S., Maiorca, M., Mulvaney, T., Topf, M., Marcia, M.