LiteFold/PDB huggingface dataset:
PDB entry 7txu: Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 with ATP and 16x(Asp-Arg)
Classification: LIGASE
Source organism: Synechocystis sp. PCC 6714; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-02-09
Authors: Sharon, I., Grogg, M., Hilvert, D., Schmeing, T.M.
PDB entry 7txv: Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 E82Q with ATP and 16x(Asp-Arg)
Classification: LIGASE
Source organism: Synechocystis sp. PCC 6714; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-02-09
Authors: Sharon, I., Grogg, M., Hilvert, D., Schmeing, T.M.
PDB entry 7txw: Crystal structure of the complex of the malaria sexual stage protein and vaccine target Pfs25 with the Fab fragment of a transmission blocking antibody 1G2
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2022-02-10
Authors: Singh, K., Gittis, A.G., Garboczi, D.N.
PDB entry 7txx: Solution structure for Bartonella henselae BamE, a component of the beta-barrel assembly machinery complex. Seattle Structural Genomics Center for Infectious Disease target BaheA.17605.a
Classification: PROTEIN BINDING
Source organism: Bartonella henselae str. Houston-1
Experimental method: SOLUTION NMR
Deposited: 2022-02-10
Authors: Buchko, G.W., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7txy: Crystal structure of the 2-Aminophenol 1,6-dioxygenase from the ARO bacterial microcompartment of Micromonospora rosaria
Classification: OXIDOREDUCTASE
Source organism: Micromonospora rosaria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-02-10
Authors: Sutter, M., Doron, L., Kerfeld, C.A.
PDB entry 7txz: Nipah Virus attachment (G) glycoprotein ectodomain in complex with nAH1.3 neutralizing antibody Fab fragment (local refinement of the distal region)
Classification: VIRAL PROTEIN
Source organism: Mus sp.; Nipah henipavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-02-10
Authors: Wang, Z.Q., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 7ty0: Nipah Virus attachment (G) glycoprotein ectodomain in complex with nAH1.3 neutralizing antibody Fab fragment (local refinement of the stalk region)
Classification: VIRAL PROTEIN
Source organism: Mus sp.; Nipah henipavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-02-10
Authors: Wang, Z.Q., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 7ty1: Crystal structure of apo eosinophil cationic protein (ribonuclease 3) from Macaca fascicularis (MfECP)
Classification: HYDROLASE
Source organism: Macaca fascicularis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-02-11
Authors: Tran, T.T.Q., Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7ty2: Crystal Structure of SETD2 Bound to an Indole-based Inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.438 Å
Deposited: 2022-02-11
Authors: Farrow, N.A.
PDB entry 7ty3: Crystal Structure of SETD2 Bound to an Indole-based Inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-02-11
Authors: Farrow, N.A.
PDB entry 7ty4: Cryo-EM structure of human Anion Exchanger 1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2022-02-11
Authors: Capper, M.J., Mathiharan, Y.K., Yang, S., Stone, A.C., Wacker, D.
PDB entry 7ty6: Cryo-EM structure of human Anion Exchanger 1 bound to 4,4'-Diisothiocyanatodihydrostilbene-2,2'-Disulfonic Acid (H2DIDS)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2022-02-11
Authors: Capper, M.J., Mathiharan, Y.K., Yang, S., Stone, A.C., Wacker, D.
PDB entry 7ty7: Cryo-EM structure of human Anion Exchanger 1 bound to Bicarbonate
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2022-02-11
Authors: Capper, M.J., Mathiharan, Y.K., Yang, S., Stone, A.C., Wacker, D.
PDB entry 7ty8: Cryo-EM structure of human Anion Exchanger 1 bound to Niflumic Acid
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2022-02-11
Authors: Capper, M.J., Mathiharan, Y.K., Yang, S., Stone, A.C., Wacker, D.
PDB entry 7tya: Cryo-EM structure of human Anion Exchanger 1 modified with Diethyl Pyrocarbonate (DEPC)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2022-02-11
Authors: Capper, M.J., Mathiharan, Y.K., Yang, S., Stone, A.C., Wacker, D.
PDB entry 7tyb: Salicylate Adenylate PchD from Pseudomonas aeruginosa containing salicyl-AMS
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2022-02-11
Authors: Meneely, K.M., Shelton, C.L., Lamb, A.L.
PDB entry 7tyd: Crystal structure of FGFR4 domain 3 in complex with a de novo-designed mini-binder in P21 space group
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2022-02-12
Authors: Park, J.S., Lee, S.
PDB entry 7tye: The crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase mutant (G108S) from E. Coli
Classification: ISOMERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-02-12
Authors: Tan, K., Perkovich, P., Joachimiak, A.
PDB entry 7tyf: Human Amylin1 Receptor in complex with Gs and rat amylin peptide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2022-02-13
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7tyg: Structure of the human leucine rich repeat protein SHOC2, residues 80-582
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-02-13
Authors: Dhembi, A., Clark, K., King, D.A.
PDB entry 7tyh: Human Amylin2 Receptor in complex with Gs and human calcitonin peptide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-02-13
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7tyi: Calcitonin Receptor in complex with Gs and rat amylin peptide, CT-like state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-02-13
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7tyj: Cryo-EM Structure of insulin receptor-related receptor (IRR) in apo-state captured at pH 7. The 3D refinement was focused on one of two halves with C1 symmetry applied
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-02-13
Authors: Wang, L.W., Hall, C., Li, J., Choi, E., Bai, X.C.
PDB entry 7tyk: Cryo-EM Structure of insulin receptor-related receptor (IRR) in apo-state captured at pH 7. The 3D refinement was applied with C2 symmetry
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-02-13
Authors: Wang, L.W., Hall, C., Li, J., Choi, E., Bai, X.C.
PDB entry 7tyl: Calcitonin Receptor in complex with Gs and rat amylin peptide, bypass motif
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-02-13
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7tym: Cryo-EM Structure of insulin receptor-related receptor (IRR) in active-state captured at pH 9. The 3D refinement was applied with C2 symmetry
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-02-13
Authors: Wang, L.W., Hall, C., Li, J., Choi, E., Bai, X.C.
PDB entry 7tyn: Calcitonin Receptor in complex with Gs and salmon calcitonin peptide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-02-13
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7tyo: Calcitonin receptor in complex with Gs and human calcitonin peptide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-02-14
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7typ: TEAD2 bound to GNE-7883
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-02-14
Authors: Noland, C.L., Fong, R.
PDB entry 7tyq: TEAD2 bound to Compound 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-02-14
Authors: Noland, C.L., Fong, R.
PDB entry 7tyr: Cryo-EM structure of the basal state of the Artemis:DNA-PKcs complex (see COMPND 13/14)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2022-02-14
Authors: Watanabe, G., Lieber, M.R., Williams, D.R.
PDB entry 7tys: Cryo-EM structure of the pancreatic ATP-sensitive potassium channel bound to ATP and repaglinide with Kir6.2-CTD in the up conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2022-02-14
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7tyt: Cryo-EM structure of the pancreatic ATP-sensitive potassium channel bound to ATP and repaglinide with Kir6.2-CTD in the down conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-02-14
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7tyu: TEAD2 bound to Compound 2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-02-14
Authors: Noland, C.L., Fong, R.
PDB entry 7tyv: Structure of Lassa Virus glycoprotein (Josiah) bound to Fab 25.10C
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lassa virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-02-14
Authors: Enriquez, A.S., Hastie, K.M.
PDB entry 7tyw: Human Amylin1 Receptor in complex with Gs and salmon calcitonin peptide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-02-14
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7tyx: Human Amylin2 Receptor in complex with Gs and rat amylin peptide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2022-02-14
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7tyy: Human Amylin2 Receptor in complex with Gs and salmon calcitonin peptide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-02-14
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7tyz: Cryo-EM structure of SARS-CoV-2 spike in complex with FSR22, an anti-SARS-CoV-2 DARPin
Classification: VIRAL PROTEIN/ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2022-02-15
Authors: Kwon, Y.D., Gorman, J., Kwong, P.D.
PDB entry 7tz0: Cryo-EM structure of SARS-CoV-2 spike in complex with FSR22, an anti-SARS-CoV-2 DARPin (Local refinement of FSR22 and RBD)
Classification: VIRAL PROTEIN/ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2022-02-15
Authors: Kwon, Y.D., Gorman, J., Kwong, P.D.
PDB entry 7tz1: Crystal Structure of a Mycobacteriophage Cluster A2 Immunity Repressor:DNA Complex
Classification: GENE REGULATION/DNA
Source organism: Mycobacterium phage TipsytheTRex; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2022-02-15
Authors: McGinnis, R.J., Brambley, C.A., Stamey, B., Green, W.C., Gragg, K.N., Cafferty, E.R., Terwilliger, T.C., Hammel, M., Hollis, T.J., Miller, J.M., Gainey, M.D., Wallen, J.R.
PDB entry 7tz2: Structure of human Fibrinogen-like protein 1
Classification: IMMUNOSUPPRESSANT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-02-15
Authors: Ming, Q., Tran, T.H., Luca, V.C.
PDB entry 7tz3: Iturin from Bacillus subtilis ATCC 19659
Classification: SURFACTANT PROTEIN
Source organism: Bacillus subtilis
Experimental method: SOLUTION NMR
Deposited: 2022-02-15
Authors: Silva, B.M., de Magalhaes, M.T.Q., Rodrigues, J.T.
PDB entry 7tz4: Salicylate Adenylate PchD from Pseudomonas aeruginosa containing 4-cyanosalicyl-AMS
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-02-15
Authors: Shelton, C.L., Meneely, K.M., Lamb, A.L.
PDB entry 7tz5: Cryo-EM structure of antibody TJ5-5 bound to H3 COBRA TJ5 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2022-02-15
Authors: Abbadi, N.S., Mousa, J.J.
PDB entry 7tz6: Structure of mitochondrial bc1 in complex with ck-2-68
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2022-02-15
Authors: Xia, D., Esser, L., Zhou, F., Huang, R.
PDB entry 7tz7: PI3K alpha in complex with an inhibitor
Classification: transferase/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2022-02-15
Authors: Knapp, M.S., Tang, J.
PDB entry 7tz8: Solution NMR structure of the PBS linker polypeptide domain (fragment 254-400) of phycobilisome linker protein ApcE from Synechocystis sp. PCC 6803 refined with NH RDCs. Northeast Structural Genomics Consortium Target SgR209C
Classification: LYASE
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: SOLUTION NMR
Deposited: 2022-02-15
Authors: Ramelot, T.A., Tejero, R., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)
PDB entry 7tz9: Structure of PQS Response Protein PqsE(E182W) Variant
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2022-02-15
Authors: Jeffrey, P.D., Taylor, I.R., Bassler, B.L.
PDB entry 7tza: Structure of PQS Response Protein PqsE in complex with N-(4-(3-neopentylureido)phenyl)-1H-indazole-7-carboxamide
Classification: HYDROLASE/INHIBITOR
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-02-15
Authors: Jeffrey, P.D., Taylor, I.R., Bassler, B.L.
PDB entry 7tzb: Crystal structure of the human mitochondrial seryl-tRNA synthetase (mt SerRS) bound with a seryl-adenylate analogue
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2022-02-15
Authors: Kuhle, B., Hirschi, M., Doerfel, L., Lander, G., Schimmel, P.
PDB entry 7tzc: A drug and ATP binding site in type 1 ryanodine receptor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2022-02-15
Authors: Melville, Z., Dridi, H., Yuan, Q., Reiken, S., Anetta, W., Liu, Y., Clarke, O.B., Marks, A.R.
PDB entry 7tzd: Solution NMR of the specialized apo-acyl carrier protein (RPA2022) from Rhodopseudomonas palustris, refined without RDCs. Northeast Structural Genomics Consortium Target RpR324
Classification: TRANSFERASE
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Experimental method: SOLUTION NMR
Deposited: 2022-02-15
Authors: Ramelot, T.A., Tejero, R., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)
PDB entry 7tze: Structure of murine LAG3 domains 1-2
Classification: IMMUNOSUPPRESSANT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2022-02-15
Authors: Ming, Q., Tran, T.H., Luca, V.C.
PDB entry 7tzf: Human Amylin3 Receptor in complex with Gs and rat amylin peptide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-02-15
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M.
PDB entry 7tzg: Structure of human LAG3 in complex with antibody single-chain variable fragment
Classification: IMMUNOSUPPRESSANT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.71 Å
Deposited: 2022-02-15
Authors: Ming, Q., Tran, T.H., Luca, V.C.
PDB entry 7tzh: Structure of human LAG3 domains 3-4 in complex with antibody single chain-variable fragment
Classification: IMMUNOSUPPRESSANT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2022-02-15
Authors: Ming, Q., Tran, T.H., Luca, V.C.
PDB entry 7tzi: Structure of a pseudomurein peptide ligase type E from Methanothermobacter thermautotrophicus
Classification: LIGASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.911 Å
Deposited: 2022-02-15
Authors: Carbone, V., Schofield, L.R., Sutherland-Smith, A.J., Ronimus, R.S., Subedi, B.P.
PDB entry 7tzj: SARS CoV-2 PLpro in complex with inhibitor 3k
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2022-02-15
Authors: Calleja, D.J., Klemm, T., Lechtenberg, B.C., Kuchel, N.W., Lessene, G., Komander, D.
PDB entry 7tzk: EPS8 SH3 Domain with NleH1 PxxDY Motif
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2022-02-15
Authors: Grishin, A.M., Cygler, M.
PDB entry 7tzl: The DH dehydratase domain of AlnB
Classification: LYASE
Source organism: Streptomyces griseofuscus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-02-16
Authors: Swain, K., Blackson, W., Wang, B., Zhao, H., Nannenga, B.L.
PDB entry 7tzm: The crystal structure of WT CYP199A4 bound to 4-iodobenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.524 Å
Deposited: 2022-02-16
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 7tzn: The crystal structure of WT CYP199A4 bound to 4-fluorobenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.839 Å
Deposited: 2022-02-16
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 7tzo: The apo structure of human mTORC2 complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2022-02-16
Authors: Yu, Z., Chen, J., Pearce, D.
PDB entry 7tzp: Crystal Structure of Putataive Short-Chain Dehydrogenase/Reductase (FabG) from Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 in Complex with NADH
Classification: BIOSYNTHETIC PROTEIN
Source organism: Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-02-16
Authors: Minasov, G., Shuvalova, L., Dubrovska, I., Kiryukhina, O., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7tzr: Crystal structure of the E. coli thiM riboswitch bound to N-methyl-1-(quinoxalin-6-yl)methanamine (compound 16)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-02-16
Authors: Nuthanakanti, A., Serganov, A.
PDB entry 7tzs: Crystal structure of the E. coli thiM riboswitch in complex with quinoxalin-6-ylmethanamine (compound 17)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2022-02-16
Authors: Nuthanakanti, A., Serganov, A.
PDB entry 7tzt: Crystal structure of the E. coli thiM riboswitch in complex with N1,N1-dimethyl-N2-(quinoxalin-6-ylmethyl)ethane-1,2-diamine (linked compound 37)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2022-02-16
Authors: Nuthanakanti, A., Serganov, A.
PDB entry 7tzu: Crystal structure of the E. coli thiM riboswitch bound to 1-(4-(piperazin-1-yl)pyridin-3-yl)-N-(quinoxalin-6-ylmethyl)methanamine (linked compound 38)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2022-02-16
Authors: Nuthanakanti, A., Serganov, A.
PDB entry 7tzv: Structure of DriD C-domain bound to 9mer ssDNA
Classification: TRANSCRIPTION
Source organism: Caulobacter vibrioides; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-02-16
Authors: Schumacher, M.A., Laub, M.
PDB entry 7tzw: The crystal structure of WT CYP199A4 bound to 4-chlorobenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.462 Å
Deposited: 2022-02-16
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 7tzx: The crystal structure of WT CYP199A4 bound to 4-chloromethylbenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.414 Å
Deposited: 2022-02-16
Authors: Podgorski, M.N., Scaffidi-Muta, J., Bell, S.G.
PDB entry 7tzy: The crystal structure of WT CYP199A4 bound to 4-(2-bromoethyl)benzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.992 Å
Deposited: 2022-02-16
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 7tzz: Crystal structure of arabidopsis thaliana acetohydroxyacid synthase P197T mutant in complex with bispyribac-sodium
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2022-02-16
Authors: Guddat, L.W., Cheng, Y.
PDB entry 7u00: The crystal structure of WT CYP199A4 bound to 4-(2-chloroethyl)benzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.657 Å
Deposited: 2022-02-17
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 7u01: Structure of CD148 fibronectin type III domain 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29708 Å
Deposited: 2022-02-17
Authors: Zhou, D., Zhu, J.
PDB entry 7u02: Structure of the C. crescentus DriD C-domain bound to ssDNA
Classification: TRANSCRIPTION
Source organism: Caulobacter vibrioides (strain ATCC 19089 / CB15); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2022-02-17
Authors: Schumacher, M.A.
PDB entry 7u04: IOMA class antibody ACS101
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2022-02-17
Authors: Farokhi, E., Stanfield, R.L., Wilson, I.A.
PDB entry 7u05: Structure of the yeast TRAPPII-Rab11/Ypt32 complex in the closed/closed state (composite structure)
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-02-17
Authors: Bagde, S.R., Fromme, J.C.
PDB entry 7u06: Structure of the yeast TRAPPII-Rab11/Ypt32 complex in the closed/open state (composite structure)
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-02-17
Authors: Bagde, S.R., Fromme, J.C.
PDB entry 7u07: Crystal structure of queuine salvage enzyme DUF2419, apo form
Classification: HYDROLASE
Source organism: Sphaerobacter thermophilus (strain DSM 20745 / S 6022)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-02-17
Authors: Hung, S.-H., Swairjo, M.A.
PDB entry 7u08: Structure of CD148 fibronectin type III domain 1 and 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.30692 Å
Deposited: 2022-02-17
Authors: Zhou, D., Zhu, J.
PDB entry 7u09: Crystal Structure of C13B8 Fab in complex with SARS-CoV-2 S fusion peptide
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-02-17
Authors: Tortorici, M.A., Veesler, D.
PDB entry 7u0a: Crystal Structure of C77G12 Fab in complex with SARS-CoV-2 S fusion peptide
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-02-17
Authors: Tortorici, M.A., Veesler, D.
PDB entry 7u0b: Crystal structure of broadly neutralizing antibody HEPC3.1
Classification: ANTIVIRAL PROTEIN,IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2022-02-17
Authors: Flyak, A.I., Bjorkman, P.J.
PDB entry 7u0c: Crystal structure of broadly neutralizing antibody HEPC3.4
Classification: ANTIVIRAL PROTEIN,IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2022-02-17
Authors: Flyak, A.I., Bjorkman, P.J.
PDB entry 7u0d: Local refinement of cryo-EM structure of the interface of the Omicron RBD in complex with antibodies B-182.1 and A19-46.1
Classification: Vral Protein/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2022-02-17
Authors: Zhou, T., kwong, P.D.
PDB entry 7u0e: Crystal Structure of C13C9 Fab in complex with SARS-CoV-2 S fusion peptide
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-02-18
Authors: Tortorici, M.A., Veesler, D.
PDB entry 7u0f: HIV-1 Rev in complex with tubulin
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2022-02-18
Authors: Eren, E.
PDB entry 7u0g: structure of LIN28b nucleosome bound 3 OCT4
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli K-12; Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-02-18
Authors: Lian, T., Guan, R., Bai, Y.
PDB entry 7u0h: State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae BY4741
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2022-02-18
Authors: Cruz, V.E., Sekulski, K., Peddada, N., Erzberger, J.P.
PDB entry 7u0i: Structure of LIN28b nucleosome bound 2 OCT4
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli K-12; Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-02-18
Authors: Tengfei, L., Guan, R., Bai, Y.
PDB entry 7u0j: Structure of 162bp LIN28b nucleosome
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-02-18
Authors: Lian, T., Guan, R., Bai, Y.
PDB entry 7u0k: IOMA class antibody Fab ACS124
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-02-18
Authors: Farokhi, E., Stanfield, R.L., Wilson, I.A.
PDB entry 7u0l: Crystal structure of the CCoV-HuPn-2018 RBD (domain B) in complex with canine APN
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Canis lupus familiaris; Coronaviridae sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2022-02-18
Authors: Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u0m: Crystal structure of a enoyl-[acyl-carrier-protein] reductase (InhA) from Mycobacterium abscessus bound to NAD and NITD-916
Classification: OXIDOREDUCTASE
Source organism: Mycobacteroides abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-02-18
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u0n: Crystal structure of chimeric omicron RBD (strain BA.1) complexed with human ACE2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2022-02-18
Authors: Geng, Q., Shi, K., Ye, G., Zhang, W., Aihara, H., Li, F.
PDB entry 7u0o: Crystal structure of an enoyl-[acyl-carrier-protein] reductase InhA from Mycobacterium fortuitum bound to NAD and NITD-916
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium fortuitum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-02-18
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u0p: SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.76 Å
Deposited: 2022-02-18
Authors: Patel, A., Ortlund, E.
PDB entry 7u0q: SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-02
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2022-02-18
Authors: Patel, A., Ortlund, E.
PDB entry 7u0r: Crystal structure of Methanomethylophilus alvus PylRS(N166A/V168A) complexed with meta-trifluoromethyl-2-benzylmalonate and AMP-PNP
Classification: TRANSLATION/INHIBITOR
Source organism: Candidatus Methanomethylophilus alvus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-02-18
Authors: Swenson, C.V., Roe, L.T., Fricke, R.C.B., Smaga, S.S., Gee, C.L., Schepartz, A.
PDB entry 7u0s: Crystal Structure of FK506-binding protein 1A from Aspergillus fumigatus Bound to Ascomycin
Classification: ANTIFUNGAL PROTEIN
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-02-18
Authors: DeBouver, N.D., Fox III, D., Hoy, M.J., Heitman, J., Lorimer, D.D., Horanyi, P.S., Edwards, T.E., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u0t: Crystal Structure of a human Calcineurin A - Calcineurin B fusion bound to FKBP12 and FK-520
Classification: HYDROLASE/ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-02-18
Authors: Fox III, D., Mayclin, S.J., DeBouver, N.D., Hoy, M.J., Heitman, J., Lorimer, D.D., Horanyi, P.S., Edwards, T.E., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u0u: Crystal Structure of a Aspergillus fumigatus Calcineurin A - Calcineurin B fusion bound to FKBP12 and FK-506
Classification: ANTIFUNGAL PROTEIN
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-02-18
Authors: Fox III, D., Abendroth, J., DeBouver, N.D., Hoy, M.J., Heitman, J., Lorimer, D.D., Horanyi, P.S., Edwards, T.E., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u0v: Structure of myxoma virus M062 protein variant Lau
Classification: VIRAL PROTEIN
Source organism: Myxoma virus (strain Lausanne)Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-02-19
Authors: O'Byrne, P., Khan, A.R.
PDB entry 7u0w: Structure of myxoma virus M062 protein variant MAV
Classification: VIRAL PROTEIN
Source organism: Myxoma virus (strain Lausanne)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.205 Å
Deposited: 2022-02-19
Authors: O'Byrne, P., Khan, A.R.
PDB entry 7u0x: SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-13
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.82 Å
Deposited: 2022-02-19
Authors: Patel, A., Ortlund, E.
PDB entry 7u0y: Crystal structure of Pepper RNA aptamer in complex with HBC599 ligand and Fab BL3-6
Classification: IMMUNE SYSTEM/RNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2022-02-19
Authors: Rees, H.C., Piccirilli, J.A.
PDB entry 7u0z: High-resolution map of tau filament from progressive supranuclear palsy (PSP) case 1
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-02-19
Authors: FItzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u10: TMEM106B(120-254) protofilament from progressive supranuclear palsy (PSP) case 2
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-02-19
Authors: Fitzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u11: TMEM106B(120-254) protofilament from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 1)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-02-19
Authors: Fitzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u12: TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 2)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-02-19
Authors: Fitzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u13: TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 4)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-02-19
Authors: Fitzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u14: TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type C (case 8)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-02-19
Authors: Fitzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u15: TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type B case 2 (case 7).
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-02-19
Authors: Fitzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u16: TMEM106B(120-254) protofilament from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (all cases combined).
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-02-19
Authors: Fitzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u17: TMEM106B(120-254) T185S singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type B case 2 (case 7).
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-02-19
Authors: Fitzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u18: TMEM106B(120-254) T185S protofilament from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (all cases combined).
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-02-20
Authors: Fitzpatrick, A.W.P., Stowell, M.H.B., Chang, A., Xiang, X., Wang, J., Lee, C., Arakhamia, T., Simjanoska, M., Wang, C., Carlomagno, Y., Zhang, G., Dhingra, S., Thierry, M., Perneel, J., Heeman, B., Forgrave, L.M., DeTure, M., DeMarco, M.L., Cook, C.N., Rademakers, R., Dickson, D., Petrucelli, L., Mackenzie, I.R.A.
PDB entry 7u19: RFC:PCNA bound to nicked DNA
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-02-20
Authors: Liu, X., Gaubitz, C., Pajak, J., Kelch, B.A.
PDB entry 7u1a: RFC:PCNA bound to dsDNA with a ssDNA gap of six nucleotides
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-02-20
Authors: Liu, X., Gaubitz, C., Pajak, J., Kelch, B.A.
PDB entry 7u1b: Crystal structure of EstG in complex with tantalum cluster
Classification: HYDROLASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2022-02-20
Authors: Chen, Z., Gabelli, S.B.
PDB entry 7u1c: Structure of EstG crystalized with SO4 and Tris
Classification: HYDROLASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-02-20
Authors: Gabelli, S.B., Chen, Z.
PDB entry 7u1d: Crystal structure of arabidopsis thaliana acetohydroxyacid synthase P197T mutant in complex with chlorimuron-ethyl
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2022-02-21
Authors: Guddat, L.W., Cheng, Y.
PDB entry 7u1e: CryoEM structure of the pancreatic ATP-sensitive potassium channel bound to ATP with Kir6.2-CTD in the down conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.52 Å
Deposited: 2022-02-21
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7u1h: Crystal structure of Lens culinaris vicilin
Classification: ALLERGEN
Source organism: Lens culinaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-02-21
Authors: Robinson, K.A., Bakestani, I.D., Loewen, M.C.
PDB entry 7u1i: Crystal structure of Pisum sativum vicilin
Classification: ALLERGEN
Source organism: Pisum sativum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-02-21
Authors: Beavington, B.A.G., Bakestani, I.D., Robinson, K.A., Loewen, M.C.
PDB entry 7u1j: Crystal structure of Pisum sativum convicilin
Classification: ALLERGEN
Source organism: Pisum sativum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2022-02-21
Authors: Bakestani, I.D., Robinson, K.A., Loewen, M.C.
PDB entry 7u1m: Crystal structure of NTMT1 in complex with compound YD206
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.17 Å
Deposited: 2022-02-21
Authors: Yadav, R., Noinaj, N.
PDB entry 7u1n: Crystal structure of the Anopheles darlingi AD-118 long form D7 salivary protein
Classification: BLOOD CLOTTING
Source organism: Anopheles darlingi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-02-21
Authors: Alvarenga, P.H., Gittis, A.G., Garboczi, D.N., Andersen, J.F.
PDB entry 7u1o: Crystal structure of queuine salvage enzyme DUF2419 complexed with queuosine
Classification: HYDROLASE
Source organism: Sphaerobacter thermophilus DSM 20745
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-02-21
Authors: Hung, S.-H., Swairjo, M.A.
PDB entry 7u1p: RFC:PCNA bound to DNA with a ssDNA gap of five nucleotides
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-02-21
Authors: Liu, X., Gaubitz, C., Pajak, J., Kelch, B.A.
PDB entry 7u1q: Cryo-EM structure of the pancreatic ATP-sensitive potassium channel bound to ATP and repaglinide with SUR1-in conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-02-21
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7u1r: SARS-CoV-2 Spike-derived peptide S1185-1193 K1191N mutant (RLNEVANNL) presented by HLA-A*02:01
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-02-22
Authors: Szeto, C., Gras, S.
PDB entry 7u1s: Cryo-EM structure of the pancreatic ATP-sensitive potassium channel bound to ATP and repaglinide with SUR1-out conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-02-22
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7u1t: EBNA1 DNA binding domain (401-641) binds to half Dyad Symmetry element
Classification: VIRAL PROTEIN/DNA
Source organism: Human herpesvirus 4 strain B95-8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-02-22
Authors: Mei, Y., Lieberman, P.
PDB entry 7u1u: Crystal structure of arabidopsis thaliana acetohydroxyacid synthase W574L mutant
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.22 Å
Deposited: 2022-02-22
Authors: Guddat, L.W., Cheng, Y.
PDB entry 7u1v: Structure of SPAC806.04c protein from fission yeast covalently bound to BeF3
Classification: HYDROLASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-02-22
Authors: Jacewicz, A., Sanchez, A.M., Shuman, S.
PDB entry 7u1x: Structure of SPAC806.04c protein from fission yeast covalently bound to BeF3
Classification: HYDROLASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2022-02-22
Authors: Jacewicz, A., Sanchez, A.M., Shuman, S.
PDB entry 7u1y: Structure of SPAC806.04c protein from fission yeast bound to AlF4 and Co2+
Classification: HYDROLASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2022-02-22
Authors: Jacewicz, A., Sanchez, A.M., Shuman, S.
PDB entry 7u1z: Crystal structure of the DRBD and CROPs of TcdA
Classification: TOXIN
Source organism: Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å
Deposited: 2022-02-22
Authors: Baohua, C., Peng, C., Kay, P., Rongsheng, J.
PDB entry 7u20: Crystal structure of human METTL1 and WDR4 complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-02-22
Authors: Li, J., Nowak, R.P., Fischer, E.S., Gregory, R.
PDB entry 7u21: Human Class I MHC HLA-A2 in complex with AVGSYVYSV peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-02-22
Authors: Weiss, L.I., Baker, B.M.
PDB entry 7u22: Mycobacterium tuberculosis RNA polymerase sigma A holoenzyme open promoter complex containing UMN-7
Classification: ANTIBIOTIC
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.87 Å
Deposited: 2022-02-22
Authors: Molodtsov, V., Ebright, R.H.
PDB entry 7u23: Single-chain LCDV-1 viral insulin-like peptide bound to IGF-1R ectodomain, leucine-zippered form
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-02-22
Authors: Kirk, N.S., Lawrence, M.C.
PDB entry 7u24: Cryo-EM structure of the pancreatic ATP-sensitive potassium channel bound to ATP and glibenclamide with Kir6.2-CTD in the up conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2022-02-23
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7u25: Crystal structure of arabidopsis thaliana acetohydroxyacid synthase W574L mutant in complex with bispyribac-sodium
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2022-02-23
Authors: Guddat, L.W., Cheng, Y.