LiteFold/PDB huggingface dataset:
PDB entry 6yg2: Crystal structure of MKK7 (MAP2K7) in complex with ibrutnib, with covalent and allosteric binding modes
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-03-27
Authors: Chaikuad, A., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yg3: Crystal structure of MKK7 (MAP2K7) covalently bound with CPT1-70-1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-03-27
Authors: Chaikuad, A., Tan, L., Wang, J., Liang, Y., Gray, N.S., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yg4: Crystal structure of MKK7 (MAP2K7) in complex with K00007
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-03-27
Authors: Chaikuad, A., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yg5: Crystal structure of MKK7 (MAP2K7) in complex with ASC69
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-03-27
Authors: Chaikuad, A., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yg6: Crystal structure of MKK7 (MAP2K7) covalently bound with type-II inhibitor TL10-105
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-03-27
Authors: Chaikuad, A., Tan, L., Wang, J., Liang, Y., Gray, N.S., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yg7: Crystal structure of MKK7 (MAP2K7) covalently bound with type-II inhibitor SB1-G-23
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-03-27
Authors: Chaikuad, A., Tan, L., Wang, J., Liang, Y., Gray, N.S., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yg8: Cryo-EM structure of a BcsB pentamer in the context of an assembled Bcs macrocomplex
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-03-27
Authors: Zouhir, S., Krasteva, P.V.
PDB entry 6yg9: CRYSTAL STRUCTURE OF HUMAN SERUM ALBUMIN (HSA) IN COMPLEX WITH GN-07.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2020-03-27
Authors: Schreuder, H.A., Liesum, A.
PDB entry 6yga: Crystal structure of the apo NatC complex
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.397 Å
Deposited: 2020-03-27
Authors: Grunwald, S., Hopf, L., Bock-Bierbaum, T., Lally, C.C., Spahn, C.M.T., Daumke, O.
PDB entry 6ygb: Crystal structure of the NatC complex bound to CoA
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.451 Å
Deposited: 2020-03-27
Authors: Grunwald, S., Hopf, L., Bock-Bierbaum, T., Lally, C.C., Spahn, C.M.T., Daumke, O.
PDB entry 6ygc: Crystal structure of the NatC complex bound to Arl3 peptide and CoA
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.994 Å
Deposited: 2020-03-27
Authors: Grunwald, S., Hopf, L., Bock-Bierbaum, T., Lally, C.C., Spahn, C.M.T., Daumke, O.
PDB entry 6ygd: Crystal structure of the NatC complex bound to Gag peptide and CoA
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.752 Å
Deposited: 2020-03-27
Authors: Grunwald, S., Hopf, L., Bock-Bierbaum, T., Lally, C.C., Spahn, C.M.T., Daumke, O.
PDB entry 6yge: NADase from Aspergillus fumigatus
Classification: HYDROLASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-03-27
Authors: Stromland, O., Ziegler, M., Kallio, J.P.
PDB entry 6ygf: NADase from Aspergillus fumigatus with trapped reaction products
Classification: HYDROLASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-03-27
Authors: Stromland, O., Ziegler, M., Kallio, J.P.
PDB entry 6ygg: NADase from Aspergillus fumigatus complexed with a substrate anologue
Classification: HYDROLASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-03-27
Authors: Stromland, O., Ziegler, M., Kallio, J.P.
PDB entry 6ygh: Duck hepatitis B virus capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Hepatitis B virus duck/DHBV-16
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-03-27
Authors: Makbul, C., Bottcher, B.
PDB entry 6ygi: Duck hepatitis B virus capsid Mutant R124E_delta78-122
Classification: VIRUS LIKE PARTICLE
Source organism: Hepatitis B virus duck/DHBV-16
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-03-27
Authors: Makbul, C., Bottcher, B.
PDB entry 6ygj: small-molecule stabilizer of 14-3-3 and the Carbohydrate Response Element Binding Protein (ChREBP) protein-protein interaction
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2020-03-27
Authors: Ottmann, C., Visser, E.J.
PDB entry 6ygk: TGT Y330F mutant crystallised at pH 8.5
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygl: TGT W326F mutant labelled mit 5F-Trp crystallised at pH 5.5
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygm: TGT W95F mutant labelled mit 5F-Trp crystallised at pH 5.5
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygn: Titin kinase and its flanking domains
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-03-27
Authors: Fleming, J.R., Franke, B., Bogomolovas, J., Mayans, O.
PDB entry 6ygo: TGT W95F mutant labelled mit 5F-Trp crystallised at pH 8.5
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygp: TGT WT labelled mit 5F-Trp crystallised at pH 5.5
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygq: EclA N-terminal domain; PllA-like lectin
Classification: SUGAR BINDING PROTEIN
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-03-27
Authors: Koehnke, J., Sikandar, A.
PDB entry 6ygr: tRNA-guanine Transglycosylase (TGT) in co-crystallized complex with 6-Amino-4-(2-phenylethyl)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygs: tRNA-guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-(methylamino)-4-(4-(trifluoromethyl)phenethyl)-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygt: Crystal structure of variant T52P of the intracellular chorismate mutase from Mycobacterium tuberculosis
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.635 Å
Deposited: 2020-03-27
Authors: Khatanbaatar, T., Thorbjornsrud, H.V., Cordara, G., Krengel, U.
PDB entry 6ygu: Crystal structure of the minimal Mtr4-Red1 complex (single chain) from Chaetomium thermophilum
Classification: RNA BINDING PROTEIN
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2020-03-27
Authors: Dobrev, N., Ahmed, Y.L., Sinning, I.
PDB entry 6ygv: tRNA-Guanine Transglycosylase (TGT) in co-crystallized complex with (E)-N-ethyl-4-oxo-4-phenylbut-2-enamide
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heyder, L., Heine, A., Diederich, W., Klebe, G.
PDB entry 6ygw: TGT W178F mutant labelled mit 5F-Trp crystallised at pH 5.5
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygx: tRNA-guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 6-amino-2-(methylamino)-4-(2-((2R,3R,4S,5R,6S)-3,4,5,6-tetramethoxytetrahydro-2H-pyran-2-yl)ethyl)-1H-imidazo[4,5-g]quinazolin-8(7H)-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2020-03-27
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygy: tRNA-Guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 6-Amino-4-[2-(4-methylphenyl)ethyl]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2020-03-28
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6ygz: tRNA Guanine Transglycosylase (TGT) labelled with 5-fluoro-tryptophan in co-crystallized complex with 6-Amino-4-(2-phenylethyl)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2020-03-28
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6yh0: Marasmius oreades agglutinin (MOA) in complex with the truncated PVPRAHS synthetic substrate
Classification: TOXIN
Source organism: Marasmius oreades; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2020-03-28
Authors: Cordara, G., Manna, D., Krengel, U.
PDB entry 6yh1: tRNA-guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 6-amino-2-(methylamino)-4-(4-(trifluoromethyl)phenethyl)-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-03-28
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6yh2: tRNA-guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2020-03-28
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6yh3: tRNA-Guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-(methylamino)-4-phenethyl-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2020-03-28
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6yh4: Crystal structure of chimeric carbonic anhydrase XII with 2,3,5,6-Tetrafluoro-4-(propylthio)benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-03-28
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6yh5: Crystal structure of chimeric carbonic anhydrase XII with 2-Chloro-4-[(pyrimidin-2-ylsulfanyl)acetyl]benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-03-28
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6yh6: Crystal structure of chimeric carbonic anhydrase XII with 2-(Cyclooctylamino)-3,5,6-trifluorobenzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-03-28
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6yh7: Crystal structure of chimeric carbonic anhydrase XII with 3-[(1S)-2,3-Dihydro-1H-inden-1-ylamino]-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2020-03-28
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6yh8: Crystal structure of chimeric carbonic anhydrase XII with 2-[(1S)-1,2,3,4-Tetrahydronapthalen-1-ylamino)-3,5,6-trifluorobenzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-03-28
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6yh9: Crystal structure of chimeric carbonic anhydrase XII with 2,3,6-trifluoro-5-{[(1R,2S)-2-hydroxy-1,2-diphenylethyl]amino}-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-03-28
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6yha: Crystal structure of chimeric carbonic anhydrase XII with 2,3,5,6-Tetrafluoro-4-(propylthio)benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-03-28
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6yhb: Crystal structure of chimeric carbonic anhydrase XII with 4-[(4,6-dimethylpyrimidin-2-yl)thio]-2,3,5,6-tetrafluorobenzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-03-28
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6yhc: Crystal structure of chimeric carbonic anhydrase XII with 3-(benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2020-03-28
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6yhd: tRNA-guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 6-amino-4-(2-((2R,3S,4R,5R)-3,4-dihydroxy-5-methoxytetrahydrofuran-2-yl)ethyl)-2-(methylamino)-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-03-28
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6yhe: tRNA-Guanine Transglycosylase (TGT) labeled with 5-fluorotryptophan in co-crystallized complex with 6-amino-4-(2-((3aR,4R,6R,6aR)-6-methoxy-2,2-dimethyltetrahydrofuro[3,4-d][1,3]dioxol-4-yl)ethyl)-2-(methylamino)-1H-imidazo[4,5-g]quinazolin-8(7H)-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2020-03-29
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6yhf: Solution NMR Structure of APP TMD
Classification: MEMBRANE PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-03-29
Authors: Silber, M., Muhle-Goll, C.
PDB entry 6yhg: Thrombin in complex with D-Phe-Pro-m-methoxybenzylamide derivative (16a)
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2020-03-29
Authors: Sandner, A., Heine, A., Klebe, G., Collins, C.
PDB entry 6yhh: X-ray Structure of Flavobacterium johnsoniae chitobiase (FjGH20)
Classification: HYDROLASE
Source organism: Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-03-30
Authors: Mazurkewich, S., Helland, R., MacKenzie, A., Eijsink, V.G.H., Pope, P.B., Branden, G., Larsbrink, J.
PDB entry 6yhi: Solution NMR Structure of APP G38L mutant TMD
Classification: MEMBRANE PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-03-30
Authors: Silber, M., Muhle-Goll, C.
PDB entry 6yhj: Thrombin in complex with D-Phe-Pro-2-chlorothiophen derivative (16e)
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2020-03-30
Authors: Sandner, A., Heine, A., Klebe, G., Collins, C.
PDB entry 6yhk: Crystal structure of full-length CNFy (C866S) from Yersinia pseudotuberculosis
Classification: TOXIN
Source organism: Yersinia pseudotuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-03-30
Authors: Lukat, P., Gazdag, E.M., Heidler, T.V., Blankenfeldt, W.
PDB entry 6yhl: Crystal structure of CNFy from Yersinia pseudotuberculosis - N-terminal fragment comprising residues 1-704
Classification: TOXIN
Source organism: Yersinia pseudotuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.277 Å
Deposited: 2020-03-30
Authors: Lukat, P., Gazdag, E.M., Heidler, T.V., Blankenfeldt, W.
PDB entry 6yhm: Crystal structure of the C-terminal domain of CNFy from Yersinia pseudotuberculosis
Classification: TOXIN
Source organism: Yersinia pseudotuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2020-03-30
Authors: Lukat, P., Gazdag, E.M., Heidler, T.V., Blankenfeldt, W.
PDB entry 6yhn: Crystal structure of domains 4-5 of CNFy from Yersinia pseudotuberculosis
Classification: TOXIN
Source organism: Yersinia pseudotuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-03-30
Authors: Lukat, P., Gazdag, E.M., Heidler, T.V., Blankenfeldt, W.
PDB entry 6yho: Solution NMR Structure of APP G38P mutant TM
Classification: MEMBRANE PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-03-30
Authors: Silber, M., Muhle-Goll, C.
PDB entry 6yhp: Solution NMR Structure of APP V44M mutant TMD
Classification: MEMBRANE PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-03-30
Authors: Silber, M., Muhle-Goll, C.
PDB entry 6yhq: Crystal Structure of Fab F5.18.6, anti-Plasmodium vivax AMA1
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2020-03-30
Authors: Bentley, G.A., Saul, F.A., Vulliez-le Normand, B.
PDB entry 6yhr: Crystal structure of Werner syndrome helicase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-03-30
Authors: Newman, J.A., Gavard, A.E., Savitsky, P., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Gileadi, O.
PDB entry 6yhs: Acinetobacter baumannii ribosome-amikacin complex - 50S subunit
Classification: RIBOSOME
Source organism: Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-03-30
Authors: Nicholson, D., Edwards, T.A., O'Neill, A.J., Ranson, N.A.
PDB entry 6yht: A lid blocking mechanism of a cone snail toxin revealed at the atomic level
Classification: TOXIN
Source organism: Conus cocceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-03-31
Authors: Saikia, C., Altman-Gueta, H., Dym, O., Frolow, F., Gurevitz, M., Gordon, D., Reuveny, E., Karbat, I.
PDB entry 6yhu: Crystal structure of the nsp7-nsp8 complex of SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-03-31
Authors: Konkolova, E., Klima, M., Boura, E.
PDB entry 6yhv: Structural insights into Pseudomonas aeruginosa Type six secretion system exported effector 8: unliganded Tse8
Classification: TOXIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.893 Å
Deposited: 2020-03-31
Authors: Sainz-Polo, M.A., Capuni, R., Pretre, G., Gonzalez-Magana, A., Lucas, M., Altuna, J., Montanchez, I., Fucini, P., Albesa-Jove, D.
PDB entry 6yhw: Co-crystals in the P212121 space group, of a beta-cyclodextrin spacered by triazole heptyl from alpha-D-mannose, with FimH lectin at 2.00 A resolution.
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.962 Å
Deposited: 2020-03-31
Authors: de Ruyck, J., Bouckaert, J.
PDB entry 6yhx: Solution NMR Structure of APP I45T mutant TMD
Classification: MEMBRANE PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-03-31
Authors: Silber, M., Muhle-Goll, C.
PDB entry 6yhy: A lid blocking mechanism of a cone snail toxin revealed at the atomic level
Classification: TOXIN
Source organism: Conus consors
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-03-31
Authors: Saikia, C., Altman-Gueta, H., Dym, O., Frolow, F., Gurevitz, M., Gordon, D., Reuveny, E., Karbat, I.
PDB entry 6yhz: UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain.
Classification: PROTEIN BINDING
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 2020-03-31
Authors: Kawale, A.A., Burmann, B.B.
PDB entry 6yi0: Human histidine triad nucleotide-binding protein 2 (hHINT2) refined to 1.65 A in P41212 space group
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-03-31
Authors: Dolot, R.D., Wlodarczyk, A., Bujacz, G.D., Nawrot, B.C.
PDB entry 6yi1: Crystal structure of human glutaminyl cyclase in complex with Glu(gamma-hydrazide)-Phe-Ala
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2020-03-31
Authors: Kupski, O., Sautner, V., Tittmann, K.
PDB entry 6yi2: UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain.
Classification: PROTEIN BINDING
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 2020-03-31
Authors: Kawale, A.A., Burmann, B.B.
PDB entry 6yi3: The N-terminal RNA-binding domain of the SARS-CoV-2 nucleocapsid phosphoprotein
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: SOLUTION NMR
Deposited: 2020-03-31
Authors: Veverka, V., Boura, E.
PDB entry 6yi4: Structure of IMP-13 metallo-beta-lactamase complexed with citrate anion
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-03-31
Authors: Zak, K.M., Zhou, R.X., Softley, C.A., Bostock, M.J., Sattler, M., Popowicz, G.M.
PDB entry 6yi5: In-situ structure of the trimeric HEF from influenza C by flexible fitting into a cryo-ET map.
Classification: VIRAL PROTEIN
Source organism: Influenza C virus (strain C/Johannesburg/1/1966)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.1 Å
Deposited: 2020-03-31
Authors: Halldorsson, S., Rosenthal, P.B.
PDB entry 6yi6: Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2020-04-01
Authors: Kljajic, M., Heine, A., Klebe, G.
PDB entry 6yi7: Structure of cathepsin B1 from Schistosoma mansoni (SmCB1) in complex with an azanitrile inhibitor
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2020-04-01
Authors: Jilkova, A., Rezacova, P., Pachl, P., Fanfrlik, J., Rubesova, P., Guetschow, M., Mares, M.
PDB entry 6yi8: HUMAN FGFR4 KINASE DOMAIN (447-753) IN COMPLEX WITH ROBLITINIB
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2020-04-01
Authors: Ostermann, N.
PDB entry 6yi9: Crystal structure of the rat cytosolic PCK1, acetylated on Lys244
Classification: LYASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-04-01
Authors: Latorre-Muro, P., Baeza, J., Hurtado-Guerrero, R., Hicks, T., Delso, I., Hernandez-Ruiz, C., Velazquez-Campoy, A., Lawton, A.J., Angulo, J., Denu, J.M., Carrodeguas, J.A.
PDB entry 6yia: 14-3-3 sigma in complex with SMAD2 pS465 peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-04-01
Authors: Kiehstaller, S., Graf, S., Hennig, S.
PDB entry 6yib: 14-3-3 sigma in complex with SMAD3 pS423 peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-01
Authors: Kiehstaller, S., Graf, S., Hennig, S.
PDB entry 6yic: 14-3-3 sigma in complex with SMAD4 pS403 peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-01
Authors: Kiehstaller, S., Graf, S., Hennig, S.
PDB entry 6yid: Crystal structure of ULK2 in complex with SBI-0206965
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-04-01
Authors: Chaikuad, A., Ren, H., Bakas, N.A., Lambert, L.J., Cosford, N.D.P., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yie: Structure of a Borealin-INCENP-Survivin complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.49 Å
Deposited: 2020-04-01
Authors: Serena, M., Elliott, P.R., Barr, F.A.
PDB entry 6yif: Structure of Chromosomal Passenger Complex (CPC) bound to phosphorylated Histone 3 peptide at 1.8 A.
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2020-04-01
Authors: Serena, M., Elliott, P.R., Barr, F.A.
PDB entry 6yig: Crystal structure of the N-terminal EF-hand domain of Arabidopsis thaliana AtEH1/Pan1
Classification: ENDOCYTOSIS
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-04-01
Authors: Yperman, K., Merceron, R., De Munck, S., Bloch, Y., Savvides, S.N., Pleskot, R., Van Damme, D.
PDB entry 6yih: Structure of Chromosomal Passenger Complex (CPC) bound to phosphorylated Histone 3 peptide at 2.6 A.
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-04-01
Authors: Serena, M., Elliott, P.R., Barr, F.A.
PDB entry 6yii: Crystal structure of a Class III adenylyl cyclase-like ATP-binding protein from Pseudomonas aeruginosa
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2020-04-01
Authors: Moniot, S., Steegborn, C.
PDB entry 6yij: Crystal structure of the CREBBP bromodomain in complex with a benzo-diazepine ligand
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-04-01
Authors: Picaud, S., Brand, M., Tobias, K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Conway, S., Filippakopoulos, P.
PDB entry 6yik: Crystal structure of the CREBBP bromodomain in complex with a tetrahydroquinoxaline ligand
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-01
Authors: Picaud, S., Brand, M., Tobias, K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Conway, S., Filippakopoulos, P.
PDB entry 6yil: Crystal structure of the CREBBP bromodomain in complex with a tetrahydroquinoxaline ligand
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2020-04-01
Authors: Picaud, S., Brand, M., Tobias, K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Conway, S., Filippakopoulos, P.
PDB entry 6yim: Crystal structure of the CREBBP bromodomain in complex with a benzo-diazepine ligand
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2020-04-01
Authors: Picaud, S., Brand, M., Tobias, K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Conway, S., Filippakopoulos, P.
PDB entry 6yin: Crystal structure of the first bromodomain of BRD4 in complex with a benzo-diazepine ligand
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2020-04-01
Authors: Picaud, S., Brand, M., Tobias, K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Conway, S., Filippakopoulos, P.
PDB entry 6yio: CRYSTAL STRUCTURE OF FAB RG6292 IN COMPLEX WITH CD25 ECD
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-04-01
Authors: Benz, J., Koll, H., Leibrock, L.
PDB entry 6yip: Structure of MKLP2 coiled coil
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2020-04-01
Authors: Serena, M., Elliott, P.R., Barr, F.A.
PDB entry 6yiq: tRNA-Guanine Transglycosylase (TGT) in co-crystallized complex (P2) with 6-amino-2-(methylamino)-4-phenethyl-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-04-01
Authors: Nguyen, A., Heine, A., Klebe, G.
PDB entry 6yir: Crystal structure of Bacillus subtilis MsmX ATPase
Classification: HYDROLASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2020-04-01
Authors: Leisico, F., Santos-Silva, T., Romao, M.J.
PDB entry 6yis: Trypsin inhibitor in complex with bovine trypsin
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2020-04-01
Authors: Badran, M.J., Heine, A., Klebe, G.
PDB entry 6yit: Trypsin inhibitor in complex with bovine trypsin
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-04-01
Authors: Badran, M.J., Heine, A., Klebe, G.
PDB entry 6yiu: Trypsin inhibitor in complex with bovine trypsin
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2020-04-01
Authors: Badran, M.J., Heine, A., Klebe, G.
PDB entry 6yiv: Trypsin inhibitor in complex with bovine trypsin
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2020-04-01
Authors: Badran, M.J., Heine, A., Klebe, G.
PDB entry 6yiw: Trypsin inhibitor in complex with bovine trypsin
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2020-04-01
Authors: Badran, M.J., Heine, A., Klebe, G.
PDB entry 6yix: Trypsin inhibitor in complex with bovine trypsin
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2020-04-01
Authors: Badran, M.J., Heine, A., Klebe, G.
PDB entry 6yiy: Trypsin inhibitor in complex with bovine trypsin
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2020-04-01
Authors: Badran, M.J., Heine, A., Klebe, G.
PDB entry 6yiz: Crystal structure of PqsR (MvfR) ligand-binding domain in complex with triazolo-pyridine inverse agonist A
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.163 Å
Deposited: 2020-04-01
Authors: Schmelz, S., Blankenfeldt, W.
PDB entry 6yj0: Solution NMR structure of titin N2A region Ig domain I83
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2020-04-02
Authors: Pfuhl, M., Gage, M.
PDB entry 6yj1: The M23 peptidase domain of the Staphylococcal phage 2638A endolysin
Classification: VIRAL PROTEIN
Source organism: Staphylococcus phage 2638A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-04-02
Authors: Dunne, M., Ernst, P., Sobieraj, A., Pluckthun, A., Loessner, M.J.
PDB entry 6yj2: Structural and DNA binding studies of the transcriptional repressor Rv2506 (BkaR) from Mycobacterium tuberculosis supports a role in L-Leucine catabolism
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-02
Authors: Keep, N.H., Pritchard, J.E., Sula, A., Cole, A.R., Kendall, S.L.
PDB entry 6yj3: Metala-Carborane di-propyl-sulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-04-02
Authors: Brynda, J., Rezacova, P., Pospisilova, K., Kugler, M.
PDB entry 6yj4: Structure of Yarrowia lipolytica complex I at 2.7 A
Classification: MEMBRANE PROTEIN
Source organism: Yarrowia lipolytica; Yarrowia lipolytica (strain CLIB 122 / E 150)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-04-02
Authors: Hirst, J., Grba, D.
PDB entry 6yj5: Focused refinement cryo-EM structure of the yeast mitochondrial complex I sub-stoichiometric sulfur transferase subunit
Classification: TRANSFERASE
Source organism: Yarrowia lipolytica
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-04-02
Authors: Hirst, J., Grba, D.
PDB entry 6yj6: Structure of the TFIIIC subcomplex tauA
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-02
Authors: Vorlaender, M.K., Muller, C.W.
PDB entry 6yj7: DarB fom B. subtilis in complex with AMP
Classification: UNKNOWN FUNCTION
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-04-02
Authors: Heidemann, J.L., Neumann, P., Ficner, R.
PDB entry 6yj8: DarB-APO
Classification: UNKNOWN FUNCTION
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-04-02
Authors: Heidemann, J.L., Neumann, P., Ficner, R.
PDB entry 6yj9: DarB in complex with 3'3'cGAMP
Classification: UNKNOWN FUNCTION
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-02
Authors: Heidemann, J.L., Neumann, P., Ficner, R.
PDB entry 6yja: DarB fom B. subtilis in complex with c-di-AMP
Classification: UNKNOWN FUNCTION
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-02
Authors: Heidemann, J.L., Neumann, P., Ficner, R.
PDB entry 6yjb: VcaM4I restriction endonuclease 5hmC-ssDNA complex
Classification: HYDROLASE
Source organism: synthetic construct; Vibrio campbellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-04-02
Authors: Pastor, M., Czapinska, H., Lutz, T., Helbrecht, I., Xu, S., Bochtler, M.
PDB entry 6yjc: Crystal structure of p38alpha in complex with SR154
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74101 Å
Deposited: 2020-04-02
Authors: Joerger, A.C., Schroeder, M., Roehm, S., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yjd: Lamin A coil2 dimer stabilized by N-terminal capping
Classification: NUCLEAR PROTEIN
Source organism: Bacillus phage phi29; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-04-03
Authors: Lilina, A.V., Stalmans, G., Strelkov, S.V.
PDB entry 6yje: Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from PEG3350 and ammonium acetate at pH 5.5
Classification: BIOSYNTHETIC PROTEIN
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2020-04-03
Authors: Blaszczyk, B.K., Hyvonen, M.
PDB entry 6yjf: Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from PEGSmear at pH 6.5
Classification: BIOSYNTHETIC PROTEIN
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-04-03
Authors: Hyvonen, M., Brear, P., Blaszczyk, B.K.
PDB entry 6yjg: Crystal structure of MINDY1 mutant-Y114F
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2020-04-03
Authors: Abdul Rehman, S.A., Kulathu, Y.
PDB entry 6yjh: Crystal structure of Imidazole Glycerol Phosphate Dehydratase from Mycobacterium tuberculosis at 1.61 A resolution
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2020-04-03
Authors: Timofeev, V.I., Abramchik, Y.A., Skvortsov, T.A., Azhikina, T.L., Muravieva, T.I., Kostromina, M.A., Esipov, R.S., Kuranova, I.P.
PDB entry 6yji: Structure of FgCelDH7C
Classification: OXIDOREDUCTASE
Source organism: Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-04-03
Authors: Haddad Momeni, M., Fredslund, F., Berrin, J.G., Abou Hachem, M., Welner, D.H.
PDB entry 6yjj: Structure of CYRI-B (FAM49B) from Rhincodon typus (selenomethionine derivative)
Classification: CYTOSOLIC PROTEIN
Source organism: Rhincodon typus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-04-03
Authors: Kaplan, E.
PDB entry 6yjk: Structure of CYRI-B (FAM49B) from Rhincodon typus
Classification: CYTOSOLIC PROTEIN
Source organism: Rhincodon typus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2020-04-03
Authors: Kaplan, E.
PDB entry 6yjl: Solution NMR structure of the C-terminal arm of RSV nucleoprotein
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A (strain A2)
Experimental method: SOLUTION NMR
Deposited: 2020-04-03
Authors: Cardone, C., Eleouet, J.-F., Galloux, M., Sizun, C.
PDB entry 6yjm: Crystal Structure of the Catalytic Domain of ADAMTS-5 in Complex with the Inhibitor GLPG1972
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-04-03
Authors: Goepfert, A., Leonard, P., Triballeau, N., Fleury, D., Mollat, P., Lamers, M.
PDB entry 6yjn: Crystal structure of beta carbonic anhydrase from the pathogenic bacterium Burkholderia pseudomallei.
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-04-03
Authors: Angeli, A., Ferraroni, M.
PDB entry 6yjo: Structure of FgChi7B
Classification: OXIDOREDUCTASE
Source organism: Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2020-04-04
Authors: Haddad Momeni, M., Fredslund, F., Berrin, J.G., Abou Hachem, M., Welner, D.H.
PDB entry 6yjp: Crystal structure of a complex between glycosylated NKp30 and its deglycosylated tumour ligand B7-H6
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2020-04-04
Authors: Skalova, T., Dohnalek, J., Skorepa, O., Kalouskova, B., Pazicky, S., Blaha, J., Vanek, O.
PDB entry 6yjq: Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-04-04
Authors: Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.
PDB entry 6yjr: Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2020-04-04
Authors: Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.
PDB entry 6yjs: Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with biantennary pentasaccharide M592
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-04
Authors: Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.
PDB entry 6yjt: Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-04
Authors: Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.
PDB entry 6yju: Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP and biantennary pentasaccharide M592
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2020-04-04
Authors: Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.
PDB entry 6yjv: Crystal structure of unliganded MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with UDP-2-deoxy-2-fluoroglucose and biantennary pentasaccharide M592
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-04
Authors: Wu, L., Darby, J.F., Gilio, A.K., Davies, G.J.
PDB entry 6yjw: Structure of Fragaria ananassa O-methyltransferase crystallized with PAS polypeptide
Classification: TRANSFERASE
Source organism: Fragaria ananassa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-04-05
Authors: Schiefner, A., Skerra, A.
PDB entry 6yjx: Structure of Hen egg-white lysozyme crystallized with PAS polypeptide
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-04-05
Authors: Schiefner, A., Skerra, A.
PDB entry 6yjy: Crystal structure of human glutaminyl cyclase in complex with neurotensin 1-5
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2020-04-05
Authors: Funk, L.M., Sautner, V., Tittmann, K.
PDB entry 6yjz: Crystal structure of mouse pyridoxal kinase in apo form
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2020-04-05
Authors: Kasaragod, V.B., Schindelin, H.
PDB entry 6yk0: Crystal structure of mouse pyridoxal kinase in complex with ATP-gamma-S
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-04-05
Authors: Kasaragod, V.B., Schindelin, H.
PDB entry 6yk1: Crystal structure of mouse pyridoxal kinase in complex with ATP-gamma-S and artesunate
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-04-05
Authors: Kasaragod, V.B., Schindelin, H.
PDB entry 6yk2: Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound (S)-1-[2'-Amino-2'-carboxyethyl]-5,7-dihydrothieno[3,4-d]pyrimidin- 2,4(1H,3H)-dione at resolution 1.60A
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.612 Å
Deposited: 2020-04-05
Authors: Frydenvang, K., Kastrup, J.S.
PDB entry 6yk3: Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound ( S) - 1- [2'-Amino-2'-carboxyethyl]-5 ,7- dihydropyrrolo[3,4-d]pyrimidin-2,4(1H,3H)-dione at resolution 1.20A
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-04-05
Authors: Frydenvang, K., Kastrup, J.S.
PDB entry 6yk4: Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound ( S) - 1- [2'-Amino-2'-carboxyethyl]-6-methyl-5 ,7- dihydropyrrolo[3,4-d]pyrimidin-2,4(1H,3H)-dione at resolution 1.00A
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.999 Å
Deposited: 2020-04-05
Authors: Frydenvang, K., Kastrup, J.S.
PDB entry 6yk5: Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound (S)-1-(2'-Amino-2'-carboxyethyl)-5,7-dihydrofuro[3,4-d]- pyrimidine-2,4(1H,3H)-dione at resolution 1.15A
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2020-04-05
Authors: Frydenvang, K., Kastrup, J.S.
PDB entry 6yk6: Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound (S)-1-(2'-Amino-2'-carboxyethyl)furo[3,4-d]pyrimidin-2,4-dione at resolution 1.47A
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.469 Å
Deposited: 2020-04-05
Authors: Frydenvang, K., Kastrup, J.S.
PDB entry 6yk7: Crystal structure of p38 in complex with SR43
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-04-05
Authors: Chaikuad, A., Roehm, S., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6yk8: OTU-like deubiquitinase from Legionella -Lpg2529
Classification: CELL INVASION
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2020-04-05
Authors: Shin, D., Dikic, I.
PDB entry 6yk9: [Fe]-hydrogenase from Methanolacinia paynteri with bound guanylylpyridinol at 1.7-A resolution
Classification: OXIDOREDUCTASE
Source organism: Methanolacinia paynteri G-2000
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-06
Authors: Wagner, T., Huang, G., Arriaza-Gallardo, F.J., Shima, S.
PDB entry 6yka: Asymmetric [Fe]-hydrogenase from Methanolacinia paynteri apo and in complex with FeGP at 2.1-A resolution
Classification: OXIDOREDUCTASE
Source organism: Methanolacinia paynteri G-2000
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-04-06
Authors: Wagner, T., Huang, G., Arriaza-Gallardo, F.J., Shima, S.
PDB entry 6ykb: [Fe]-hydrogenase from Methanolacinia paynteri in complex with GMP at 1.55-A resolution
Classification: OXIDOREDUCTASE
Source organism: Methanolacinia paynteri G-2000
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-04-06
Authors: Wagner, T., Huang, G., Arriaza-Gallardo, F.J., Shima, S.