LiteFold/PDB huggingface dataset:
PDB entry 8zkr: Structure of Polycystin-1/Polycystin-2 complex with phosphatidic acid bound
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-17
Authors: Chen, M.Y., Su, Q., Shi, Y.G.
PDB entry 8zks: Structure of Polycystin-1/Polycystin-2 complex with GOF mutation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-05-17
Authors: Chen, M.Y., Su, Q., Shi, Y.G.
PDB entry 8zkt: Structure of Polycystin-1/Polycystin-2 complex with GOF mutations
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2024-05-17
Authors: Chen, M.Y., Su, Q., Shi, Y.G.
PDB entry 8zku: Structure of Polycystin-1/Polycystin-2 complex with GOF mutations
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2024-05-17
Authors: Chen, M.Y., Su, Q., Shi, Y.G.
PDB entry 8zkv: Crystal structure of mutant catalytic domains of threonine deaminase in complex with PLP
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2024-05-17
Authors: Khodi, S.
PDB entry 8zkw: Cryo-EM structure of the Drosophila INDY (apo-asymmetric, pH 6)
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2024-05-17
Authors: Kim, S., Park, J.G., Choi, S.H., Kim, J.W., Jin, M.S.
PDB entry 8zkz: Cryo-EM structure of the Drosophila INDY (apo-asymmetric, pH8)
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-05-17
Authors: Kim, S., Park, J.G., Choi, S.H., Kim, J.W., Jin, M.S.
PDB entry 8zl1: Cryo-EM structure of the Drosophila INDY (apo outward-open, pH 6)
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2024-05-17
Authors: Kim, S., Park, J.G., Choi, S.H., Kim, J.W., Jin, M.S.
PDB entry 8zl2: Cryo-EM structure of the Drosophila INDY (DIDS-bound asymmetric, pH 6)
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-17
Authors: Kim, S., Park, J.G., Choi, S.H., Kim, J.W., Jin, M.S.
PDB entry 8zl3: Cryo-EM structure of the Drosophila INDY (DIDS-bound outward-open, pH 6)
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-17
Authors: Kim, S., Park, J.G., Choi, S.H., Kim, J.W., Jin, M.S.
PDB entry 8zl4: Cryo-EM structure of the Drosophila INDY (citrate-bound inward-occluded, pH 6)
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-05-17
Authors: Kim, S., Park, J.G., Choi, S.H., Kim, J.W., Jin, M.S.
PDB entry 8zl6: Cryo-EM structure of the Drosophila INDY (apo inward-open, pH 8)
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-17
Authors: Kim, S., Park, J.G., Choi, S.H., Kim, J.W., Jin, M.S.
PDB entry 8zl8: Structure of Polycystin-1/Polycystin-2 complex with 7b,27-DHC
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2024-05-17
Authors: Chen, M.Y., Su, Q., Shi, Y.G.
PDB entry 8zl9: ASFV p72 in complex with Fab G6
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: African swine fever virus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.36 Å
Deposited: 2024-05-17
Authors: Wang, X., Fu, W., Yu, Q.
PDB entry 8zla: Crystal Structure of monomeric Rag-like small GTPase from Asgard Lokiarchaeota (LokiRagM) in complex with GDP
Classification: HYDROLASE
Source organism: Candidatus Prometheoarchaeum syntrophicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-05-17
Authors: Alsheikh, F.B., Robinson, R.C.
PDB entry 8zlb: EB bound state of hPAC
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2024-05-18
Authors: Su, N., Chen, X.
PDB entry 8zlc: Crystal Structure of Ankyrin Repeat Protein from Plasmodium falciparum
Classification: STRUCTURAL PROTEIN
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2024-05-18
Authors: Kumari, P., Gautam, A.K., Gourinath, S., Malhotra, P.
PDB entry 8zld: Crystal structure of PfHO from Plasmodium falciparum at 2.78 A
Classification: DNA BINDING PROTEIN
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2024-05-18
Authors: Caaveiro, J.M.M., Senoo, A.
PDB entry 8zle: hAE3NTD2TMD with PT5,CLR, and Y01
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-05-19
Authors: Jian, L., Zhang, Q., Yao, D., Wang, Q., Xia, Y., Qin, A., Cao, Y.
PDB entry 8zlf: Crystal structure of DH domain of FYVE Domain containing protein(FP10) from Entamoeba histolytica
Classification: SIGNALING PROTEIN
Source organism: Entamoeba histolytica HM-1:IMSS-A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-05-19
Authors: Gautam, A.K., Umarao, P., Gourinath, S.
PDB entry 8zlg: Crystal structure of a beta-1,4-endoglucanase from Bispora sp. MEY-1
Classification: HYDROLASE
Source organism: Bispora sp. MEY-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-05-20
Authors: Zheng, J., Luo, H.
PDB entry 8zlh: The crystal structure of CcmS.
Classification: STRUCTURAL PROTEIN
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-05-20
Authors: Cheng, J., Li, C.L.
PDB entry 8zli: BTA-2-bound E46K alpha-synuclein fibrils
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-05-20
Authors: Liu, K.E., Tao, Y.Q., Li, D., Liu, C.
PDB entry 8zlk: PWWP domain from human DNMT3B
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2024-05-20
Authors: Cho, C.-C., Yuan, H.S.
PDB entry 8zll: The apo state of hPAC with endogenous cholesterol
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-05-20
Authors: Zhang, H., Chen, X.
PDB entry 8zlo: F0502B-bound E46K alpha-synuclein fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-20
Authors: Liu, K.E., Tao, Y.Q., Li, D., Liu, C.
PDB entry 8zlp: apo WT polymorph 5a alpha-synuclein fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-05-20
Authors: Liu, K.E., Tao, Y.Q., Li, D., Liu, C.
PDB entry 8zlq: Proenzyme of Triticum aestivum papain-like cysteine protease Triticain-alpha inactive mutant lacking granulin domain
Classification: HYDROLASE
Source organism: Triticum aestivum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.46 Å
Deposited: 2024-05-21
Authors: Petushkova, A.I., Zalevsky, A.O., Gorokhovets, N.V., Makarov, V.A., Maslova, V.D., Fedorov, V.A., Savvateeva, L.V., Zernii, E.Y., Soond, S.M., Golovin, A.V., Zamyatnin Jr., A.A.
PDB entry 8zlr: SFX structure of CraCRY in the semiquinone state
Classification: FLAVOPROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-05-21
Authors: Maestre-Reyna, M., Hosokawa, Y., Wang, P.-H., Saft, M., Caramello, N., Engilberge, S., Franz-Badur, S., Ngura Putu, E.P.G., Nakamura, M., Wu, W.-J., Wu, H.-Y., Lee, C.-C., Huang, W.-C., Huang, K.-F., Chang, Y.-K., Yang, C.-H., Lin, W.-T., Yang, K.-C., Ban, Y., Imura, T., Kazuoka, A., Tanida, E., Owada, S., Joti, Y., Tanaka, R., Tanaka, T., Luo, F., Tono, K., Kiontke, S., Korf, L., Umena, Y., Tosha, T., Bessho, Y., Nango, E., Iwata, S., Royant, A., Tsai, M.-D., Yamamoto, J., Essen, L.-O.
PDB entry 8zls: Apo structure of BBE-like oxidative cyclase MaDS1
Classification: PLANT PROTEIN
Source organism: Morus alba
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2024-05-21
Authors: Guo, N., Fan, J., Yang, J., Lei, X.
PDB entry 8zlt: Co-crystal structure of MaDS1 with diene
Classification: PLANT PROTEIN
Source organism: Morus alba
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2024-05-21
Authors: Guo, N., Yang, J., Fan, J., Lei, X.
PDB entry 8zlu: Cryo-EM strcuture of Cas5-HNH Cascade,Conf1
Classification: IMMUNE SYSTEM
Source organism: Candidatus Cloacimonetes bacterium ADurb.Bin088; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2024-05-21
Authors: Liu, Y.N., Wang, L., Zhang, H., Zhu, H.
PDB entry 8zlw: Crystal Structure of RDGC IQ motif/dCaM Complex
Classification: PROTEIN BINDING
Source organism: Drosophila melanogaster; Escherichia coli #1/H766
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-05-21
Authors: Liu, J., Ding, Y.Z., Li, J.C., Liu, W.
PDB entry 8zlx: Crystal Structure of mPPEF2 IQ motif/apo-CaM Complex
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-21
Authors: Liu, J., Ding, Y.Z., Li, J.C., Liu, W.
PDB entry 8zly: Crystal structure of Streptococcus pneumoniae pyruvate kinase in complex with oxalate and fructose 1,6-bisphosphate and UDP
Classification: TRANSFERASE
Source organism: Streptococcus pneumoniae R6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-05-21
Authors: Nakashima, R., Taguchi, A.
PDB entry 8zlz: The complex crystal structure of CcmS and C-terminus of CcmK1.
Classification: STRUCTURAL PROTEIN
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-05-21
Authors: Cheng, J., Li, C.Y.
PDB entry 8zm0: A self-assembled nanofiber
Classification: DE NOVO PROTEIN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-21
Authors: Shi, J.H., Fang, Y., Ma, D., Wang, H.M.
PDB entry 8zm1: Structure of human pyruvate dehydrogenase kinase 2 complexed with compound 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-05-22
Authors: Akai, S., Orita, T., Nomura, A., Adachi, T.
PDB entry 8zm2: Structure of human pyruvate dehydrogenase kinase 2 complexed with compound 16
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-05-22
Authors: Akai, S., Orita, T., Nomura, A., Adachi, T.
PDB entry 8zm3: Cryo-EM strcuture of Cas5-HNH Cascade,apo-Conf2
Classification: IMMUNE SYSTEM/RNA
Source organism: Candidatus Cloacimonetes bacterium ADurb.Bin088
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-22
Authors: Liu, Y.N., Wang, L., Zhang, H., Zhu, H.
PDB entry 8zm4: Crystal structure of Thermolysin (Dose I)
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-05-22
Authors: Nam, K.H.
PDB entry 8zm5: Crystal structure of Thermolysin (Dose II)
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-05-22
Authors: Nam, K.H.
PDB entry 8zm6: Crystal structure of Thermolysin (Dose III)
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-05-22
Authors: Nam, K.H.
PDB entry 8zm7: Engineering omega-amine transaminase for extending substrate scope by ancestral sequence reconstruction
Classification: TRANSFERASE
Source organism: Aspergillus terreus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-22
Authors: Huang, J., Li, N., Cai, T.
PDB entry 8zm8: Crystal Structure of the first bromodomain of human BRD4 BD1 in complex with the inhibitor Y13221
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-05-22
Authors: Li, J., Hu, Q., Xu, H., Zhao, X., Zhang, C., Zhu, R., Wu, X., Zhang, Y., Xu, Y.
PDB entry 8zmb: Crystal Structure of the first bromodomain of human BRD4 BD1 in complex with the inhibitor Y13195
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2024-05-22
Authors: Li, J., Hu, Q., Xu, H., Zhao, X., Zhang, C., Zhu, R., Wu, X., Zhang, Y., Xu, Y.
PDB entry 8zmc: Dengue 3 NS5 methyltransferase bound to S-Adenosyl-L-homocysteine and Herbacetin
Classification: TRANSFERASE
Source organism: dengue virus type 3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-23
Authors: Bhutkar, M., Verma, S., Tomar, S., Kumar, P.
PDB entry 8zmd: Protease-activated receptor-2 (PAR2)/Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2024-05-23
Authors: He, Y., Zhu, X.
PDB entry 8zme: Protease-activated receptor-2 (PAR2)/miniG13 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-05-23
Authors: He, Y., Zhu, X.
PDB entry 8zmf: Crystal structure of an inverse agonist antipsychotic drug derivative-bound 5-HT2C
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2024-05-23
Authors: Oguma, T., Asada, H., Sekiguchi, Y., Imono, M., Iwata, S., Kusakabe, K.
PDB entry 8zmg: Crystal structure of an inverse agonist antipsychotic drug pimavanserin-bound 5-HT2A
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2024-05-23
Authors: Oguma, T., Asada, H., Sekiguchi, Y., Imono, M., Iwata, S., Kusakabe, K.
PDB entry 8zmh: Cryo-EM structure of Unbound BMV TLS
Classification: RNA
Source organism: Brome mosaic virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2024-05-23
Authors: Yang, W., Li, S., Zhang, K.
PDB entry 8zmi: Cryo-EM structure of BMV TLS-TyrRS-ATP(Pre-1a state)
Classification: LIGASE/RNA
Source organism: Brome mosaic virus; Phaseolus vulgaris
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-05-23
Authors: Zhang, K., Li, S., Yang, W.
PDB entry 8zmj: Cryo-EM structure of BMV TLS-TyrRS-YMP(post-1a state)
Classification: LIGASE/RNA
Source organism: Brome mosaic virus; Phaseolus vulgaris
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2024-05-23
Authors: Zhang, K., Li, S., Yang, W.
PDB entry 8zmk: Cryo-EM structure of BMV TLS-TyrRS (Catalysis state)
Classification: LIGASE/RNA
Source organism: Brome mosaic virus; Phaseolus vulgaris
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2024-05-23
Authors: Yang, W., Li, S., Zhang, K.
PDB entry 8zml: Structure of TNIK with inhibitor
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.489 Å
Deposited: 2024-05-23
Authors: Fan, Y.
PDB entry 8zmm: Structure of a triple-helix region of human Collagen type IV from Trautec
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-05-23
Authors: Chu, Y., Zhai, Y., Fan, X., Fu, S., Li, J., Wu, X., Cai, H., Wang, X., Li, D., Feng, P., Cao, K., Qian, S.
PDB entry 8zmn: Crystal structure of ANTXR1
Classification: TOXIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2024-05-23
Authors: Zheng, H., Hu, J., Fu, L., Chen, R.
PDB entry 8zmo: Structure of a triple-helix region of human Collagen type XVII from Trautec
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-05-23
Authors: Chu, Y., Zhai, Y., Fan, X., Fu, S., Li, J., Wu, X., Cai, H., Le, H., Li, D., Feng, P., Cao, K., Qian, S.
PDB entry 8zmp: Cryo-EM structure of the spike glycoprotein from Bat SARS-like coronavirus (Bat SL-CoV) WIV1 in locked state
Classification: VIRAL PROTEIN
Source organism: Bat SARS-like coronavirus WIV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2024-05-23
Authors: Liu, C., Beck, F., Nagy, I., Bohn, S., Plitzko, J., Baumeister, W., Zhang, X., Zinzula, L.
PDB entry 8zmq: Crystal Structure of the second bromodomain of human BRD4 BD2 in complex with the inhibitor Y13190
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-05-23
Authors: Li, J., Hu, Q., Xu, H., Zhao, X., Zhang, C., Zhu, R., Wu, X., Zhang, Y., Xu, Y.
PDB entry 8zmr: Vesamicol-bound VAChT
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12); Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-05-23
Authors: Zhang, Z., Zhang, Y., Dai, F., Zhang, Y.X., Lee, C.-H.
PDB entry 8zms: Acetylcholine-bound VAChT
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12); Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-05-23
Authors: Zhang, Z., Zhang, Y., Dai, F., Zhang, Y.X., Lee, C.-H.
PDB entry 8zmt: Cryo-EM structure of Saccharomyces cerevisiae bc1 complex in Metyltetraprole-bound state
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2024-05-23
Authors: Ye, Y., Li, Z.W., Yang, G.F.
PDB entry 8zmu: GLUTAMATE DEHYDROGENASE (W89F-MUTANT) FROM THERMOCOCCUS PROFUNDUS IN THE UNLIGANDED STATE
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.028 Å
Deposited: 2024-05-23
Authors: Wakabayashi, T., Matsui, Y., Masayoshi, M.
PDB entry 8zmv: Structure of a triple-helix region of human Collagen type XVII from Trautec
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-05-24
Authors: Chu, Y., Zhai, Y., Fan, X., Fu, S., Li, J., Wu, X., Cai, H., Tang, D., Li, D., Feng, P., Cao, K., Qian, S.
PDB entry 8zmw: Structure of a triple-helix region of human Collagen type VII from Trautec
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-05-24
Authors: Chu, Y., Zhai, Y., Fan, X., Fu, S., Li, J., Wang, L., Li, J., Wang, H., Li, D., Feng, P., Cao, K., Qian, S.
PDB entry 8zmx: Crystal Structures of meso-diaminopimelate dehydrogenase from Bacillus thermozeamaize
Classification: OXIDOREDUCTASE
Source organism: Bacillus thermozeamaize
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2024-05-24
Authors: Geng, Q., Wei, Y., Zhang, Z.J.
PDB entry 8zmy: F0502B-bound WT polymorph 5a alpha-synuclein fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-24
Authors: Liu, K.E., Tao, Y.Q., Li, D., Liu, C.
PDB entry 8zmz: Cryo-EM structure of R-eLACCO2 in the lactate-bound state
Classification: FLUORESCENT PROTEIN
Source organism: Discosoma sp.; Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-05-24
Authors: Kamijo, Y., Kusakizako, T., Nureki, O., Campbell, R.E., Nasu, Y.
PDB entry 8zn0: The Crystal Structure of an Atypical N-methyltransferasea PaOMT9 in P. amurense
Classification: TRANSFERASE
Source organism: Phellodendron amurense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-25
Authors: Xu, Z.C., Tian, Y.
PDB entry 8zn1: Structure of erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii at 3.00 A resolution
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-05-25
Authors: Viswanathan, V., Kumari, A., Singh, A., Kumar, A., Sharma, P., Chopra, S., Sharma, S., Raje, C.I., Singh, T.P.
PDB entry 8zn2: Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter sp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.65 A resolution.
Classification: TRANSFERASE
Source organism: Enterobacter sp. 638
Experimental method: X-RAY DIFFRACTION
Resolution: 2.651 Å
Deposited: 2024-05-25
Authors: Ahmad, N., Sharma, P., Bhushan, A., Sharma, S., Singh, T.P.
PDB entry 8zn3: Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter sp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.41 A resolution.
Classification: TRANSFERASE
Source organism: Enterobacter sp. 638
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2024-05-25
Authors: Ahmad, N., Sharma, P., Bhushan, A., Sharma, S., Singh, T.P.
PDB entry 8zn4: Crystal structure of Poly(ethylene glycol) stabilized erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii at 2.30 A resolution
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-25
Authors: Viswanathan, V., Kumari, A., Singh, A., Kumar, A., Sharma, P., Chopra, S., Sharma, S., Raje, C.I., Singh, T.P.
PDB entry 8zn5: Crystal Structure of Designed Clock Protein KaiC
Classification: TRANSFERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-05-26
Authors: Furuike, Y., Akiyama, S.
PDB entry 8zn6: Crystal Structure of Designed Clock Protein KaiC
Classification: TRANSFERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2024-05-26
Authors: Furuike, Y., Akiyama, S.
PDB entry 8zn7: Crystal Structure of Designed Clock Protein KaiC
Classification: TRANSFERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-05-26
Authors: Furuike, Y., Akiyama, S.
PDB entry 8zn8: MjF-3C-CdS QDs
Classification: METAL BINDING PROTEIN
Source organism: Penaeus japonicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-05-26
Authors: Duan, M.P., Zhang, T.
PDB entry 8zn9: A vast marine sulfonate-based carbon cycle fueled by novel sulfoquinovosidases
Classification: PROTEIN BINDING
Source organism: Roseobacter denitrificans OCh 114
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-26
Authors: Tang, K., Ma, X.
PDB entry 8zna: Myxococcus xanthus RomX
Classification: SIGNALING PROTEIN
Source organism: Myxococcus xanthus DK 1622
Experimental method: X-RAY DIFFRACTION
Resolution: 1.888 Å
Deposited: 2024-05-26
Authors: Chakraborty, S., Gayathri, P.
PDB entry 8znb: Cryo-EM structure of W89F mutated Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2024-05-26
Authors: Wakabayashi, T., Nakasako, M.
PDB entry 8znc: Cryo-EM structure of W89F mutated Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH, AKG in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2024-05-26
Authors: Wakabayashi, T., Nakasako, M.
PDB entry 8znd: Cryo-EM structure of W89F mutated Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH and a substrate in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2024-05-26
Authors: Wakabayashi, T., Nakasako, M.
PDB entry 8zne: Cryo-EM structure of W89F mutated Glutamate dehydrogenase from Thermococcus profundus in complex with NADP and GLU in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-05-26
Authors: Wakabayashi, T., Nakasako, M.
PDB entry 8zng: Cryo-EM structure of W89F mutated Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH and AKG in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-26
Authors: Wakabayashi, T., Nakasako, M.
PDB entry 8zni: Structure of Epstein-Barr virus major glycoprotein gp350 in complex with the receptor CR2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; human gammaherpesvirus 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-05-27
Authors: Fang, X.Y., Sun, C., Liu, Z., Zeng, M.S.
PDB entry 8znj: Cryo-EM structure of a short prokaryotic Argonaute system from archaeon Suldolobus islandicus
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Saccharolobus islandicus M.16.4; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-27
Authors: Dai, Z.K., Guan, Z.Y., Han, W.Y., Zou, T.T.
PDB entry 8znk: chromone glycosyltransferase (UGT93BB1,SdUGT2)
Classification: PLANT PROTEIN
Source organism: Saposhnikovia divaricata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-05-27
Authors: Zou, J.L., Li, H.Y., Wang, Z.L., Ye, M.
PDB entry 8znl: PD-L1 de novo designed binder with picomolar binding affinity
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-05-27
Authors: Zhao, L.
PDB entry 8znm: CRYSTAL STRUCTURE OF DI-C-GLYCOSYLTRANSFERASE GGCGT MUTANT IN COMPLEX WITH UDP-GLC
Classification: TRANSFERASE
Source organism: Glycyrrhiza glabra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2024-05-27
Authors: Feng, X.D., Liu, X.H.
PDB entry 8znn: X-ray structure of human PPAR delta ligand binding domain in complex with a synthetic agonist 16a
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-05-27
Authors: Dai, L., Sun, H., Feng, Z.
PDB entry 8zno: Cryo-EM structure of Arachis hypogaea bc1 complex
Classification: PLANT PROTEIN
Source organism: Arachis hypogaea
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-05-27
Authors: Ye, Y., Dong, J.Q., Yang, G.F.
PDB entry 8znq: Solution structure of the complex of naphthyridine-azaquinolone and an RNA with ACG/AUA motif
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2024-05-27
Authors: Fujiwara, A., Chen, Q., Nakatani, K., Murata, A., Kawai, G.
PDB entry 8znr: Cryo-EM structure of Cas8-HNH system at ssDNA-bound state
Classification: ANTIVIRAL PROTEIN
Source organism: Selenomonas sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-28
Authors: Zhang, H., Zhu, H., Li, X., Liu, Y.
PDB entry 8zns: Type I-C CRISPR-associated protein, Cas3
Classification: IMMUNE SYSTEM
Source organism: Neisseria lactamica ATCC 23970
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-05-28
Authors: Kim, D.Y., Park, H.H.
PDB entry 8znt: Catalytic antibody T99_C220A
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2024-05-28
Authors: Kobayashi, J., Yoshida, H., Tsuyuguchi, M., Kato, R.
PDB entry 8znu: Catalytic antibody T99_C220A_dP95
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-28
Authors: Kobayashi, J., Yoshida, H., Tsuyuguchi, M., Kato, R.
PDB entry 8znv: Crystal structure of beta-glucosidase Cba3 from Cellulomonas biazotea
Classification: HYDROLASE
Source organism: Cellulomonas biazotea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-28
Authors: Kim, D., Kim, I.J., Nam, K.H.
PDB entry 8znw: Crystal structure of beta-glucosidase Cba3 from Cellulomonas biazotea in complex with glucose
Classification: HYDROLASE
Source organism: Cellulomonas biazotea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-05-28
Authors: Kim, D., Kim, I.J., Nam, K.H.
PDB entry 8zny: Small GTPase RhoA Y42C mutant in complex with GDP
Classification: CELL INVASION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-05-28
Authors: Wu, H., Jiang, H.
PDB entry 8znz: CD73 bound with HB0045
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-05-28
Authors: Xu, J., Wan, L., He, Y.
PDB entry 8zo0: Samll GTPase RhoA Y42C mutant in complex with GTP analogue
Classification: CELL INVASION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2024-05-28
Authors: Jiang, H., Wu, H.
PDB entry 8zo3: The crystal structures of MurK in complex with N-acetylglucosamine from Clostridium acetobutylicum
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-05-28
Authors: Yang, X.Y., Liu, X.H.
PDB entry 8zo4: Crystal structure of Tfh TCR ectodomain thermostable mutant
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-05-28
Authors: Mori, S., Nagae, M., Yamasaki, S.
PDB entry 8zo8: Respirasome open state 3 in presence of metformin (SC-MetO3)
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2024-05-28
Authors: Teng, F., He, Z.X., Hu, Y.Q., Xu, C.Y., Guo, R.Y., Zhou, L.
PDB entry 8zo9: Structure of the wild-type PSI-9VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8zoa: Structure of the wild-type PSI-8VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8zob: Structure of the wild-type PSI-5VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8zoc: Structure of the canthaxanthin mutant PSI-9VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8zod: Structure of the canthaxanthin mutant PSI-5VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8zoe: Structure of the canthaxanthin mutant PSI-4VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8zof: Structure of the canthaxanthin mutant PSI-3VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8zog: Structure of the astaxanthin mutant PSI-9VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Shen, J.R., Wang, W.D.
PDB entry 8zoh: Structure of the astaxanthin mutant PSI-7VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Shen, J.R., Wang, W.D.
PDB entry 8zoi: Structure of the astaxanthin mutant PSI-5VCPI supercomplex in Nannochloropsis oceanica
Classification: PHOTOSYNTHESIS
Source organism: Nannochloropsis oceanica strain IMET1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-05-28
Authors: Shen, L.L., Shen, J.R., Wang, W.D.
PDB entry 8zoj: The crystal structure of YegTK267A from the Nucleoside: H+ Symporter Family
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.913 Å
Deposited: 2024-05-28
Authors: Xiao, Q.J., Deng, D.
PDB entry 8zok: EcGPR tetramer with catalytic intermediates
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2024-05-28
Authors: Zhang, T., Leng, Q., Liu, L.J.
PDB entry 8zol: Cryo-EM strcuture of Cas5-HNH Cascade,Conf3
Classification: IMMUNE SYSTEM/RNA
Source organism: Candidatus Cloacimonetes bacterium ADurb.Bin088; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-05-28
Authors: Liu, Y.N., Wang, L., Zhang, H., Zhu, H.
PDB entry 8zom: Cryo-EM structure of pyraclostrobin-bound Arachis hypogaea bc1 complex
Classification: PLANT PROTEIN
Source organism: Arachis hypogaea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2024-05-28
Authors: Cui, G.R., Wang, Y.X., Yang, G.F.
PDB entry 8zon: EcGPR at close conformation.
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-05-28
Authors: Zhang, T., Leng, Q., Liu, L.J.
PDB entry 8zoo: EcGPR at open conformation
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-05-29
Authors: Zhang, T., Leng, Q., Liu, L.J.
PDB entry 8zop: Structure of FasV in complex with FAD
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-05-29
Authors: Ma, X.Y., Chen, Q.Q.
PDB entry 8zor: Cryo-EM structure of bicarbonate transporter SbtA in complex with PII-like signaling protein SbtB (T-loop truncation) from Synechocystis sp. PCC 6803
Classification: TRANSPORT PROTEIN
Source organism: Synechocystis sp. PCC 6803 substr. Kazusa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-29
Authors: Hou, W.T., Zhou, C.Z.
PDB entry 8zos: Cryo-EM structure of pyraclostrobin-bound porcine bc1 complex
Classification: PROTEIN BINDING
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2024-05-29
Authors: Wang, Y.X., Sun, J.Y., Li, Z.W., Cui, G.R., Yang, G.F.
PDB entry 8zou: Respirasome open state 2 in presence of metformin (SC-MetO2)
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2024-05-29
Authors: Teng, F., He, Z.X., Hu, Y.Q., Xu, C.Y., Guo, R.Y., Zhou, L.
PDB entry 8zov: The crystal structures of MurK in complex with glucose from Clostridium acetobutylicum
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2024-05-29
Authors: Yang, X.Y., Liu, X.H.
PDB entry 8zow: Cryo-EM structure of Metyltetraprole-bound porcine bc1 complex
Classification: PROTEIN BINDING
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2024-05-29
Authors: Wang, Y.X., Sun, J.Y., Cui, G.R., Yang, G.F.
PDB entry 8zox: 3D structure of Y-50 TCR-TMM-CD1b ternary complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-05-29
Authors: Asa, M., Hirose, M., Nagae, M., Yamasaki, S., Kato, T.
PDB entry 8zoy: Cryo-EM structure of human norepinephrine transporter NET bound with norepinephrine in an inward open state at a resolution of 2.5 angstrom
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-29
Authors: Song, A.L., Wu, X.D.
PDB entry 8zoz: Crystal structure of the complex of glyceraldehyde-3-phosphate dehydrogenase of type B from Acinetobacter baumannii with Adenosine monophosphate at 3.20 A resolution.
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-05-29
Authors: Pahuja, P., Viswanathan, V., Kumari, A., Singh, A., Kumar, A., Sharma, P., Chopra, S., Sharma, S., Raje, C.I., Singh, T.P.
PDB entry 8zp0: Cryo-EM structure of YF23694-bound porcine bc1 complex
Classification: PROTEIN BINDING
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.44 Å
Deposited: 2024-05-29
Authors: Wang, Y.X., Sun, J.Y., Cui, G.R., Yang, G.F.
PDB entry 8zp1: Cryo-EM structure of human norepinephrine transporter NET bound with reboxetine in an outward-open state at a resolution of 2.5 angstrom
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-29
Authors: Song, A.L., Wu, X.D.
PDB entry 8zp2: Cryo-EM structure of human norepinephrine transporter NET bound with atomoxetine in an outward-open state at a resolution of 2.4 angstrom
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-05-29
Authors: Song, A.L., Wu, X.D.
PDB entry 8zp3: Human Keratin 19 head domain S35E phosphomimetic mutant segment Y6-G38 in solution
Classification: CYTOSOLIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-05-29
Authors: Jeong, M., Ji, Y., Kim, J., Lee, C.H.
PDB entry 8zp4: Cryo-EM structure of origin recognition complex (Orc1 to 5) with ARS1 DNA bound
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2024-05-29
Authors: Lam, W.H., Yu, D., Dang, S., Zhai, Y.
PDB entry 8zp5: Cryo-EM structure of origin recognition complex (Orc5 basic patch mutations) with ARS1 DNA bound
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-05-29
Authors: Lam, W.H., Yu, D., Dang, S., Zhai, Y.
PDB entry 8zp6: Crystal structure of Epoxide hydrolase MdEH (Mycobacterium dioxanotrophicus)
Classification: HYDROLASE
Source organism: Mycobacterium dioxanotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.10007 Å
Deposited: 2024-05-29
Authors: Zhou, Y., Lan, D.M., Wang, Y.H.
PDB entry 8zp7: Cryo-EM structure of Cas5-HNH Cascade bound with sDNA, Conf1
Classification: IMMUNE SYSTEM
Source organism: Candidatus Cloacimonetes bacterium ADurb.Bin088; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-29
Authors: Liu, Y.N., Wang, L., Zhang, H., Zhu, H.
PDB entry 8zp8: Respirasome open state 1 in presence of metformin(SC-MetO1)
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-05-29
Authors: Teng, F., He, Z.X., Hu, Y.Q., Xu, C.Y., Guo, R.Y., Zhou, L.
PDB entry 8zp9: Cryo-EM structure of Cas5-HNH Cascade bound with sDNA, Conf2
Classification: IMMUNE SYSTEM/DNA/RNA
Source organism: Candidatus Cloacimonetes bacterium ADurb.Bin088; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-29
Authors: Liu, Y.N., Wang, L., Zhang, H., Zhu, H.
PDB entry 8zpa: Crystal structure of a HSA/probe complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2024-05-29
Authors: Youn, S.Y., Cha, S.S.
PDB entry 8zpb: Cryo-EM structure of human norepinephrine transporter NET bound with norepinephrine in an occluded state at a resolution of 2.6 angstrom
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-05-29
Authors: Song, A.L., Wu, X.D.
PDB entry 8zpc: Acinetobacter baumannii Penicillin-Binding Protein 2
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.313 Å
Deposited: 2024-05-29
Authors: Jang, H.S., Park, H.H.
PDB entry 8zpe: SFX structure of the alanine racemase from Bacillus subtilis
Classification: ISOMERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-30
Authors: Kim, J., Nam, K.H., Cho, Y.
PDB entry 8zpf: SFX reaction state structure (0-20min) of alanine racemase
Classification: ISOMERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-30
Authors: Kim, J., Nam, K.H., Cho, Y.
PDB entry 8zpg: SFX reaction state structure (20-40min) of alanine racemase
Classification: ISOMERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-30
Authors: Kim, J., Nam, K.H., Cho, Y.
PDB entry 8zph: SFX reaction state structure (40-60min) of alanine racemase
Classification: ISOMERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-30
Authors: Kim, J., Nam, K.H., Cho, Y.
PDB entry 8zpi: The cryoEM structure of a daminobutyrate--2-oxoglutarate transaminase EctB
Classification: TRANSFERASE
Source organism: Parageobacillus caldoxylosilyticus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2024-05-30
Authors: Jiang, W.X., Cheng, X.Q., Ma, L.X., Xing, Q.
PDB entry 8zpj: EcGK bundle at APO state.
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-05-30
Authors: Zhang, T., Leng, Q., Liu, L.J.
PDB entry 8zpk: Cryo-EM structure of origin recognition complex (Orc6 with residues 1 to 270 deleted) with ARS1 DNA bound
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-05-30
Authors: Lam, W.H., Yu, D., Dang, S., Zhai, Y.
PDB entry 8zpl: Cryo-EM strucutre of CXCR4 complexed with antagonist HF51116
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2024-05-30
Authors: Jiao, H.Z., Hu, H.L.
PDB entry 8zpm: Cryo-EM strucutre of CXCR4 complexed with antagonist AMD070
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-05-30
Authors: Jiao, H.Z., Hu, H.L.
PDB entry 8zpn: Cryo-EM strucutre of CXCR4 complexed with antagonist AMD3100
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-05-30
Authors: Jiao, H.Z., Hu, H.L.
PDB entry 8zpo: The crystal structures of MurK in complex with N-acetylmuramic acid (MurNAc) from Clostridium acetobutylicum
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2024-05-30
Authors: Yang, X.Y., Liu, X.H.
PDB entry 8zpp: Local CryoEM structure of the SARS-CoV-2 BA.5 in complex with ORB10 Fab
Classification: VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-30
Authors: Cao, S., Leng, C., Hu, H.
PDB entry 8zpq: Crystal structure of SARS-Cov-2-BQ1.1-RBD and 70fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-05-31
Authors: Wu, Y., Gao, F.
PDB entry 8zpr: EcGK filament complexed with proline.
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2024-05-31
Authors: Zhang, T., Leng, Q., Liu, L.J.
PDB entry 8zps: Cryo-EM structure of prolactin-releasing peptide recognition with Gi
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-05-31
Authors: Zhao, L., Li, Y., Yuan, Q., Xu, H.E.
PDB entry 8zpt: Cryo-EM structure of prolactin-releasing peptide recognition with Gq
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-05-31
Authors: Zhao, L., Li, Y., Yuan, Q., Xu, H.E.
PDB entry 8zpu: Crystal structure of the anti-phosphorylated peptide C7 scFv antibody with peptide bound
Classification: IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-31
Authors: Caaveiro, J.M.M., Kawade, R., Tsumoto, K.
PDB entry 8zpv: Nipah virus polymerase complex
Classification: TRANSCRIPTION
Source organism: Henipavirus nipahense
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-31
Authors: Wang, Y.R., Zhang, H.Q.
PDB entry 8zpw: Cryo-EM structure of the yeast Htm1/Pdi1 complex at a resolution of 3.0 angstrom
Classification: PEPTIDE BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-31
Authors: Wu, X.W., Zhao, D., Rapoport, T.A.
PDB entry 8zpx: Structure of the wild-type Arabidopsis ABCB1 in the apo state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-05-31
Authors: Ying, W., Wei, H., Liu, X., Sun, L.
PDB entry 8zpy: Crystal structure of prefusion F of RSV
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T6; human respiratory syncytial virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2024-05-31
Authors: Huang, Q., Lang, Q., Han, X., Yan, J.
PDB entry 8zpz: Structure of the wild-type Arabidopsis ABCB1 in the brassinolide-bound state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-05-31
Authors: Ying, W., Wei, H., Liu, X., Sun, L.