LiteFold/PDB huggingface dataset:
PDB entry 6xow: CryoEM structure of human presequence protease in partial close state 2, induced by presequence of citrate synthase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2020-07-07
Authors: Liang, W.G., Tang, W.
PDB entry 6xox: cryo-EM of human GLP-1R bound to non-peptide agonist LY3502970
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-07-07
Authors: Sun, B., Kobilka, B.K., Sloop, K.W., Feng, D., Kobilka, T.S.
PDB entry 6xoy: Salmonella typhimurium tryptophan synthase complexed with D-tryptophan and D-glycerol-3-phosphate
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-07-07
Authors: Phillips, R.S.
PDB entry 6xoz: Structure of human PYCR1 complexed with L-tetrahydro-2-furoic acid
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-07-07
Authors: Tanner, J.J., Christensen, E.M.
PDB entry 6xp0: Structure of human PYCR1 complexed with N-formyl L-proline
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-07-07
Authors: Tanner, J.J., Christensen, E.M.
PDB entry 6xp1: Structure of human PYCR1 complexed with L-thiazolidine-2-carboxylate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-07-07
Authors: Tanner, J.J., Christensen, E.M.
PDB entry 6xp2: Structure of human PYCR1 complexed with L-thiazolidine-4-carboxylate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-07
Authors: Tanner, J.J., Christensen, E.M.
PDB entry 6xp3: Structure of human PYCR1 complexed with cyclopentanecarboxylic acid
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2020-07-07
Authors: Tanner, J.J., Bogner, A.N.
PDB entry 6xp4: Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-07-07
Authors: Nguyen, S., Bruning, J.B.
PDB entry 6xp5: Head-Middle module of Mediator
Classification: TRANSCRIPTION
Source organism: Chaetomium thermophilum; Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-07-08
Authors: Zhang, H.Q., Chen, D.C., Kornberg, R.D.
PDB entry 6xp6: 3C11-DQ2-glia-a2 complex
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; Triticum aestivum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-07-08
Authors: Petersen, J., Rossjohn, J.
PDB entry 6xp7: Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to ADP
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-07-08
Authors: Nguyen, S., Bruning, J.B.
PDB entry 6xp8: The crystal structure of TfuA involved in peptide backbone thioamidation from Methanosarcina acetivorans
Classification: BIOSYNTHETIC PROTEIN
Source organism: Methanosarcina acetivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-07-08
Authors: Dong, S.-H., Nair, S.K.
PDB entry 6xp9: STRUCTURE OF HUMAN PREGNANE X RECEPTOR LIGAND BINDING DOMAIN BOUND TETHERED WITH SRC co-activator peptide IN COMPLEX WITH (S,S)-1
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2020-07-08
Authors: Khan, J.A.
PDB entry 6xpa: ScoE with oxovanadium and the CABA substrate bound and His299 and Arg157 flipped out
Classification: OXIDOREDUCTASE
Source organism: Streptomyces coeruleorubidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-07-08
Authors: Jonnalagadda, R., Drennan, C.L.
PDB entry 6xpb: Structure of human GGT1 in complex with 2-amino-4-(((1-((carboxymethyl)amino)-1-oxobutan-2-yl)oxy)(phenoxy)phosphoryl)butanoic acid (ACPB) molecule
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2020-07-08
Authors: Terzyan, S.S., Hanigan, M.H.
PDB entry 6xpc: Structure of human GGT1 in complex with full GSH molecule
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2020-07-08
Authors: Terzyan, S.S., Hanigan, M.
PDB entry 6xpd: Cryo-EM structure of human ZnT8 double mutant - D110N and D224N, determined in outward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-07-08
Authors: Bai, X.C., Xue, J., Jiang, Y.X.
PDB entry 6xpe: Cryo-EM structure of human ZnT8 WT, in the presence of zinc, determined in outward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-07-08
Authors: Bai, X.C., Xue, J., Jiang, Y.X.
PDB entry 6xpf: Cryo-EM structure of human ZnT8 WT, in the absence of zinc, determined in heterogeneous conformations- one subunit in an inward-facing and the other in an outward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.9 Å
Deposited: 2020-07-08
Authors: Bai, X.C., Xue, J., Jiang, Y.X.
PDB entry 6xpg: Crystal Structure of Sialate O-acetylesterase from Bacteroides vulgatus by Serial Crystallography
Classification: HYDROLASE
Source organism: Bacteroides vulgatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-07-08
Authors: Kim, Y., Sherrell, D.A., Owen, R., Axford, D., Ebrahim, A., Johnson, J., Welk, L., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 6xph: CutR dimer with domain swap
Classification: STRUCTURAL PROTEIN
Source organism: Streptococcus intermedius SK54 = ATCC 27335
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-07-08
Authors: Ochoa, J.M., Sawaya, M.R., Nguyen, V.N., Duilio, C., Yeates, T.O., Nie, M.
PDB entry 6xpi: CutR flat hexamer, form 1
Classification: STRUCTURAL PROTEIN
Source organism: Streptococcus intermedius SK54 = ATCC 27335
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-07-08
Authors: Ochoa, J.M., Sawaya, M.R., Nguyen, V.N., Duilio, C., Yeates, T.O.
PDB entry 6xpj: CutR flat hexamer, form 2
Classification: STRUCTURAL PROTEIN
Source organism: Streptococcus intermedius SK54 = ATCC 27335
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-07-08
Authors: Ochoa, J.M., Sawaya, M.R., Nguyen, V.N., Duilio, C., Yeates, T.O.
PDB entry 6xpk: CutR Screw, form 1 with 41.9 angstrom pitch
Classification: STRUCTURAL PROTEIN
Source organism: Streptococcus intermedius SK54 = ATCC 27335
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-07-08
Authors: Ochoa, J.M., Sawaya, M.R., Nguyen, V.N., Duilio, C., Yeates, T.O.
PDB entry 6xpl: CutR Screw, form 2 with 33.8 angstrom pitch
Classification: STRUCTURAL PROTEIN
Source organism: Streptococcus intermedius SK54 = ATCC 27335
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2020-07-08
Authors: Ochoa, J.M., Sawaya, M.R., Nguyen, V.N., Duilio, C., Yeates, T.O.
PDB entry 6xpm: Crystal Structure of Sialate O-acetylesterase from Bacteroides vulgatus with microfluidics crystals at room temperature
Classification: HYDROLASE
Source organism: Bacteroides vulgatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-08
Authors: Kim, Y., Johnson, J., Welk, L., Endres, M., Levens, A., Sherrell, D.A., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 6xpn: Z-loop Deletion Mutant of AztC from Paracoccus denitrificans
Classification: METAL BINDING PROTEIN
Source organism: Paracoccus denitrificans (strain Pd 1222)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2020-07-08
Authors: Yukl, E.T.
PDB entry 6xpo: Influenza hemagglutinin A/Bangkok/01/1979(H3N2)
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Bangkok/1/1979 H3N2)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-07-08
Authors: McCarthy, K.R., Harrison, S.C.
PDB entry 6xpp: Crystal structure of itaconate modified Mycobaterium tuberculosis isocitrate lyase
Classification: LYASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-07-08
Authors: Kwai, B.X.C., Bashiri, G., Leung, I.K.H.
PDB entry 6xpq: Human antibody D1 H1-17/H3-14 in complex with the influenza hemagglutinin head domain of A/Texas/50/2012(H3N2)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Texas/50/2012(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 4.2 Å
Deposited: 2020-07-08
Authors: McCarthy, K.R., Harrison, S.C.
PDB entry 6xpr: Human antibody D2 H1-1/H3-1 H3 in complex with the influenza hemagglutinin head domain of A/Texas/50/2012(H3N2)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Texas/50/2012(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 4.092 Å
Deposited: 2020-07-08
Authors: McCarthy, K.R., Harrison, S.C., Lee, J.
PDB entry 6xps: Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to GDP
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.644 Å
Deposited: 2020-07-08
Authors: Nguyen, S., Bruning, J.B.
PDB entry 6xpt: Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to UDP
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-09
Authors: Nguyen, S., Bruning, J.B.
PDB entry 6xpu: Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to IDP
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-07-09
Authors: Nguyen, S., Bruning, J.B.
PDB entry 6xpv: Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to dTDP
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-09
Authors: Nguyen, S., Bruning, J.B.
PDB entry 6xpw: Nucleoside Diphosphate Kinase from Aspergillus fumgiatus Af293 bound to CDP
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus Af293
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-07-09
Authors: Nguyen, S., Bruning, J.B.
PDB entry 6xpx: Human antibody S1V2-51 in complex with the influenza hemagglutinin head domain of A/Aichi/2/1968 (X-31)(H3N2)
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.598 Å
Deposited: 2020-07-09
Authors: McCarthy, K.R., Harrison, S.C.
PDB entry 6xpy: Human antibody S1V2-58 in complex with the influenza hemagglutinin head domain of A/Texas/50/2012(H3N2)
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.603 Å
Deposited: 2020-07-09
Authors: McCarthy, K.R., Harrison, S.C.
PDB entry 6xpz: Human antibody S1V2-83 in complex with the influenza hemagglutinin head domain of A/Moscow/10/1999(H3N2)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Moscow/10/1999(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2020-07-09
Authors: McCarthy, K.R., Harrison, S.C.
PDB entry 6xq0: Human antibody S8V2-18 in complex with the influenza hemagglutinin head domain of A/California/7/2009(NYMC-X181)(H1N1)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/reassortant/NYMC X-181A(A/NYMC X-157 x California/07/2009)(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-09
Authors: McCarthy, K.R., Harrison, S.C.
PDB entry 6xq1: Receptor for Advanced Glycation End Products VC1 domain in complex with 3-(3-((4-(4-carboxyphenoxy)benzyl)oxy)phenyl)-1H-indole-2-carboxylic acid
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2020-07-09
Authors: Salay, L.E., Kozlyuk, N., Gilston, B.A., Gogliotti, R.D., Christov, P.P., Kim, K., Ovee, M., Waterson, A.G., Chazin, W.J.
PDB entry 6xq2: Human antibody S8V2-37 in complex with the influenza hemagglutinin head domain of A/Texas/50/2012(H3N2)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Texas/50/2012(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 3.002 Å
Deposited: 2020-07-09
Authors: McCarthy, K.R., Harrison, S.C.
PDB entry 6xq3: Receptor for Advanced Glycation End Products VC1 domain in complex with 3-(3-(((3-(4-Carboxyphenoxy)benzyl)oxy)methyl)phenyl)-1H-indole-2-carboxylic acid
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2020-07-09
Authors: Salay, L.E., Kozlyuk, N., Gilston, B.A., Gogliotti, R.D., Christov, P.P., Kim, K., Ovee, M., Waterson, A.G., Chazin, W.J.
PDB entry 6xq4: Human antibody S8V2-47 in complex with the influenza hemagglutinin head domain of A/Beijing/262/1995(H1N1)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Beijing/262/1995(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 3.347 Å
Deposited: 2020-07-09
Authors: McCarthy, K.R., Harrison, S.C.
PDB entry 6xq5: Receptor for Advanced Glycation End Products VC1 domain in complex with Fragment 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-07-09
Authors: Salay, L.E., Kozlyuk, N., Gilston, B.A., Gogliotti, R.D., Christov, P.P., Kim, K., Ovee, M., Waterson, A.G., Chazin, W.J.
PDB entry 6xq6: Receptor for Advanced Glycation End Products VC1 domain in complex with Fragment 11
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-07-09
Authors: Salay, L.E., Kozlyuk, N., Gilston, B.A., Gogliotti, R.D., Christov, P.P., Kim, K., Ovee, M., Waterson, A.G., Chazin, W.J.
PDB entry 6xq7: Receptor for Advanced Glycation End Products VC1 domain in complex with Fragment 5
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-07-09
Authors: Salay, L.E., Kozlyuk, N., Gilston, B.A., Gogliotti, R.D., Christov, P.P., Kim, K., Ovee, M., Waterson, A.G., Chazin, W.J.
PDB entry 6xq8: Receptor for Advanced Glycation End Products VC1 domain in complex with Fragments 1 & 11
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2020-07-09
Authors: Salay, L.E., Kozlyuk, N., Gilston, B.A., Gogliotti, R.D., Christov, P.P., Kim, K., Ovee, M., Waterson, A.G., Chazin, W.J.
PDB entry 6xq9: Receptor for Advanced Glycation End Products VC1 domain in complex with Fragments 1 & 13
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-09
Authors: Salay, L.E., Kozlyuk, N., Gilston, B.A., Gogliotti, R.D., Christov, P.P., Kim, K., Ovee, M., Waterson, A.G., Chazin, W.J.
PDB entry 6xqa: Crystal Structure of HLA A*2402 in complex with TYQWVLKNL, an 9-mer epitope from Influenza B virus
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2020-07-09
Authors: Nguyen, A.T., Szeto, C., Gras, S.
PDB entry 6xqb: SARS-CoV-2 RdRp/RNA complex
Classification: VIRAL PROTEIN, TRANSFERASE/HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-07-09
Authors: Liu, B., Shi, W., Yang, Y.
PDB entry 6xqc: UbKEKS
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-07-09
Authors: Delattre, P., Letourneau, D., Lavigne, P., Roucou, X., Boisvert, F.M.
PDB entry 6xqd: Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-07-09
Authors: Batool, Z., Lomakin, I.B., Bunick, C.G., Polikanov, Y.S.
PDB entry 6xqe: Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-07-09
Authors: Batool, Z., Lomakin, I.B., Bunick, C.G., Polikanov, Y.S.
PDB entry 6xqf: Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with 1,3-beta-D-cellotriosyl-glucose, presenting a 1,3-beta-D-cellobiosyl-glucose at active site
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-07-09
Authors: Liberato, M.V., Squina, F.
PDB entry 6xqg: Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with 1,3-beta-D-cellobiosyl-cellobiose, presenting a 1,3-beta-D-cellobiosyl-glucose at active site
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-07-09
Authors: Liberato, M.V., Squina, F.
PDB entry 6xqh: Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with cellotriose, presenting a 1,3-beta-D-cellobiosyl-glucose and a cellobiose at active site
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2020-07-09
Authors: Liberato, M.V., Squina, F.
PDB entry 6xqi: Structure of HIV-1 Vpr in complex with the human nucleotide excision repair protein hHR23A
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2020-07-09
Authors: Calero, G.C., Wu, Y., Weiss, S.C.
PDB entry 6xqj: Structure of HIV-1 Vpr in complex with the human nucleotide excision repair protein hHR23A
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
Experimental method: SOLUTION NMR
Deposited: 2020-07-09
Authors: Byeon, I.-J.L., Calero, G., Wu, Y., Byeon, C.H., Gronenborn, A.M.
PDB entry 6xqk: Crystal structure of the D/D domain of PKA from S. cerevisiae
Classification: SIGNALING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2020-07-09
Authors: Larrieux, N., Gonzalez Bardeci, N., Trajtenberg, F., Buschiazzo, A.
PDB entry 6xql: Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with cellohexaose, presenting a 1,3-beta-D-cellobiosyl-glucose at active site
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2020-07-09
Authors: Liberato, M.V., Squina, F.
PDB entry 6xqm: Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with laminarihexaose, presenting a laminaribiose and a glucose at active site
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-07-09
Authors: Liberato, M.V., Squina, F.
PDB entry 6xqn: Structure of a mitochondrial calcium uniporter holocomplex (MICU1, MICU2, MCU, EMRE) in low Ca2+
Classification: TRANSPORT PROTEIN/CALCIUM BINDING PROTEIN
Source organism: Homo sapiens; Tribolium castaneum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-07-09
Authors: Long, S.B., Wang, C., Baradaran, R., Jacewicz, A., Delgado, B.
PDB entry 6xqo: Structure of the human MICU1-MICU2 heterodimer, calcium bound, in association with a lipid nanodisc
Classification: CALCIUM BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-07-09
Authors: Long, S.B., Wang, C., Baradaran, R., Jacewicz, A., Delgado, B.
PDB entry 6xqp: Structure of human D462-E4 TCR in complex with human MR1-5-OP-RU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-07-10
Authors: Awad, W., Rossjohn, J.
PDB entry 6xqq: Structure of human D462-E4 TCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2020-07-10
Authors: Awad, W., Rossjohn, J.
PDB entry 6xqr: OXA-48 bound by Compound 2.2
Classification: HYDROLASE/INHIBITOR
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-07-10
Authors: Taylor, D.M., Hu, L., Prasad, B.V.V., Palzkill, T.
PDB entry 6xqs: Room-temperature X-ray Crystal structure of SARS-CoV-2 main protease in complex with Telaprevir
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-07-10
Authors: Kneller, D.W., Kovalevsky, A., Coates, L.
PDB entry 6xqt: Room-temperature X-ray Crystal structure of SARS-CoV-2 main protease in complex with Narlaprevir
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-10
Authors: Kneller, D.W., Kovalevsky, A., Coates, L.
PDB entry 6xqu: Room-temperature X-ray Crystal structure of SARS-CoV-2 main protease in complex with Boceprevir
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-07-10
Authors: Kneller, D.W., Kovalevsky, A., Coates, L.
PDB entry 6xqv: Crystal structure of the catalytic domain of PBP2 S310A from Neisseria gonorrhoeae in a pre-acylation complex with ceftriaxone
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-07-10
Authors: Fenton, B.A., Zhou, P., Davies, C.
PDB entry 6xqw: Crystal Structure of MaliM03 Fab in complex with Pfmsp1-19
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.991 Å
Deposited: 2020-07-10
Authors: Singh, S., Pancera, M.
PDB entry 6xqx: Crystal structure of the catalytic domain of PBP2 S310A from Neisseria gonorrhoeae with the H514A mutation at pH 7.5
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-07-10
Authors: Fenton, B.A., Zhou, P., Davies, C.
PDB entry 6xqy: Crystal structure of the catalytic domain of PBP2 S310A from Neisseria gonorrhoeae at pH 9.5
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-07-10
Authors: Fenton, B.A., Zhou, P., Davies, C.
PDB entry 6xqz: Crystal structure of the catalytic domain of PBP2 S310A from Neisseria gonorrhoeae at pH 7.5
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2020-07-10
Authors: Fenton, B.A., Zhou, P., Davies, C.
PDB entry 6xr0: Crystal Structure of Human Melanotransferrin in complex with SC57.32 Fab
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.064 Å
Deposited: 2020-07-10
Authors: Hayashi, K., Longenecker, K.L., Vivona, S.
PDB entry 6xr1: Computationally designed right-handed alpha/alpha single-chain toroid with 9 repeats
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-07-10
Authors: Hallinan, J.P., Doyle, L., Bradley, P., Stoddard, B.L.
PDB entry 6xr2: Computationally designed right-handed alpha/alpha homotrimeric toroid with 3 repeats per subunit
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-07-10
Authors: Hallinan, J.P., Doyle, L., Bradley, P., Stoddard, B.L.
PDB entry 6xr3: X-ray Structure of SARS-CoV-2 main protease bound to GRL-024-20 at 1.45 A
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-07-10
Authors: Anson, B., Ghosh, A.K., Mesecar, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6xr4: Integrative in situ structure of Parkinsons disease-linked human LRRK2
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 14 Å
Deposited: 2020-07-10
Authors: Villa, E., Lasker, K., Audagnotto, M.
PDB entry 6xr5: Crystal Structure of Diphosphomevalonate decarboxylase (MVD1) Cryptococcus neoformans var. grubii serotype A
Classification: LYASE
Source organism: Cryptococcus neoformans var. grubii H99
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-07-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6xr6: Abl 1b isoform active state
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-07-11
Authors: Xie, T., Saleh, T., Rossi, P., Kalodimos, C.G.
PDB entry 6xr7: Abl isoform 1b inactive1 state
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-07-11
Authors: Xie, T., Saleh, T., Rossi, P., Kalodimos, C.G.
PDB entry 6xr8: Distinct conformational states of SARS-CoV-2 spike protein
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-07-11
Authors: Zhang, J., Cai, Y.F., Xiao, T.S., Peng, H.Q., Sterling, S.M., Walsh Jr, R.M., Rawson, S., Volloch, S.R., Chen, B.
PDB entry 6xra: Distinct conformational states of SARS-CoV-2 spike protein
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-07-11
Authors: Zhang, J., Cai, Y.F., Xiao, T.S., Peng, H.Q., Sterling, S.M., Walsh Jr, R.M., Rawson, S., Rits-Volloch, S., Chen, B.
PDB entry 6xrb: Crystal structure of SciW from Salmonella typhimurium
Classification: CHAPERONE
Source organism: Salmonella typhimurium (strain SL1344)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2020-07-11
Authors: Sachar, K., Ahmad, S., Whitney, J.C., Prehna, G.
PDB entry 6xrc: Apo NIS synthetase DesD variant R306Q
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2020-07-11
Authors: Hoffmann, K.M.
PDB entry 6xre: Structure of the p53/RNA polymerase II assembly
Classification: TRANSCRIPTION, TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2020-07-12
Authors: Liou, S.-H., Singh, S., Singer, R.H., Coleman, R.A., Liu, W.
PDB entry 6xrf: EagT6 Tse6 NT complex
Classification: CHAPERONE
Source organism: Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2020-07-12
Authors: Sachar, K., Ahmad, S., Whitney, J.C., Prehna, G.
PDB entry 6xrg: Abl 1b isoform inactive2 state
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-07-12
Authors: Xie, T., Saleh, T., Rossi, P., Kalodimos, C.G.
PDB entry 6xrh: Salmonella typhimurium tryptophan synthase complexed with oxindolyl-L-alanine and D-glycerol-3-phosphate
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2020-07-12
Authors: Phillips, R.S.
PDB entry 6xri: MSMEG_2027 domain-swapped dimer
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2020-07-13
Authors: Jackson, C.J., Antoney, J.P., Ahmed, F.H.
PDB entry 6xrj: Crystal structure of the disulfide linked DH717.1 Fab dimer, derived from a macaque HIV-1 vaccine-induced Env glycan-reactive neutralizing antibody B cell lineage
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2020-07-13
Authors: Manne, K., Nicely, N.I., Acharya, P.
PDB entry 6xrk: GH5-4 broad specificity endoglucanase from an uncultured bovine rumen ciliate
Classification: HYDROLASE
Source organism: uncultured bovine rumen ciliate
Experimental method: X-RAY DIFFRACTION
Resolution: 1.419 Å
Deposited: 2020-07-13
Authors: Bingman, C.A., Smith, R.W., Glasgow, E.M., Fox, B.G.
PDB entry 6xrl: Crystal structure of human PI3K-gamma in complex with inhibitor IPI-549
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2020-07-13
Authors: Walker, N.P., Jeffrey, J.L.
PDB entry 6xrm: Crystal structure of human PI3K-gamma in complex with Compound 4
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2020-07-13
Authors: Walker, N.P., Jeffrey, J.L.
PDB entry 6xrn: Crystal structure of human PI3K-gamma in complex with Compound 17
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2020-07-13
Authors: Walker, N.P., Jeffrey, J.L.
PDB entry 6xro: Crystal structure of GlpG in complex with peptide boronate inhibitor, Ac-KRFRSMQYSA-B(OH)2
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-13
Authors: Urban, S., Cho, S.
PDB entry 6xrp: Crystal structure of GlpG in complex with peptide ketoamide inhibitor, Ac-RVWHA-ketoamide-phenylbutyl
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-07-13
Authors: Urban, S., Cho, S.
PDB entry 6xrq: Structural descriptions of ligand interactions to DNA and RNA quadruplexes folded from the non-coding region of Pseudorabies virus
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2020-07-13
Authors: Zhang, Y.S., Parkinson, G.N., Wei, D.G.
PDB entry 6xrr: Structure of SciW bound to the Rhs1 Transmembrane Domain from Salmonella typhimurium
Classification: CHAPERONE
Source organism: Salmonella typhimurium; Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-07-13
Authors: Sachar, K., Ahmad, S., Whitney, J.C., Prehna, G.
PDB entry 6xrs: Crystal structure of a GTP-binding protein EngA (Der homolog) from Neisseria gonorrhoeae bound to GDP
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae (strain NCCP11945)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-07-13
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6xrt: Cryo-EM structure of SHIV-elicited RHA1.V2.01 in complex with HIV-1 Env BG505 DS-SOSIP.664
Classification: IMMUNE SYSTEM/Viral Protein
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-07-13
Authors: Gorman, J., Kwong, P.D.
PDB entry 6xru: GTP-specific succinyl-CoA synthetase complexed with desulfo-coenzyme A, magnesium ions and succinates
Classification: LIGASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-07-13
Authors: Huang, J., Fraser, M.E.
PDB entry 6xrv: X-ray structure of the monoclinic crystal form at 1.43 A resolution of lipase from Thermomyces (Humicola) lanuginosa at 173 K
Classification: LIPID BINDING PROTEIN
Source organism: Thermomyces lanuginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2020-07-13
Authors: McPherson, A.
PDB entry 6xrw: Chromosomal ParDE TA system from P. aeruginosa
Classification: TOXIN/ANTITOXIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-07-13
Authors: Bourne, C.R., Snead, K.J., Thomas, L.M.
PDB entry 6xrx: Crystal structure of the mosquito protein AZ1 as an MBP fusion
Classification: LIPID BINDING PROTEIN
Source organism: Aedes aegypti; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-07-14
Authors: Pedersen, L.C., Mueller, G.A., Foo, A.C.Y.
PDB entry 6xry: Intrinsically disordered bacterial polar organizing protein Z, PopZ, interacts with protein binding partners through an N-terminal Molecular Recognition Feature
Classification: PROTEIN BINDING
Source organism: Caulobacter vibrioides (strain ATCC 19089 / CB15)
Experimental method: SOLUTION NMR
Deposited: 2020-07-14
Authors: Nordyke, C.T., Ahmed, Y.M., Puterbaugh, R.Z., Bowman, G.R., Varga, K.
PDB entry 6xrz: The 28-kDa Frameshift Stimulation Element from the SARS-CoV-2 RNA Genome
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.9 Å
Deposited: 2020-07-14
Authors: Zhang, K., Zheludev, I., Hagey, R., Wu, M., Haslecker, R., Hou, Y., Kretsch, R., Pintilie, G., Rangan, R., Kladwang, W., Li, S., Pham, E., Souibgui, C., Baric, R., Sheahan, T., Souza, V., Glenn, J., Chiu, W., Das, R.
PDB entry 6xs3: X-ray structure of the monoclinic crystal form at 2.48 A resolution of lipase from Thermomyces (Humicola) lanuginosa at 298 K
Classification: LIPID BINDING PROTEIN
Source organism: Thermomyces lanuginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2020-07-14
Authors: McPherson, A.
PDB entry 6xs4: Crystal structure of glycyl radical enzyme ECL_02896 from Enterobacter cloacae subsp. cloacae
Classification: LYASE
Source organism: Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2020-07-14
Authors: Valleau, D., Evdokimova, E., Stogios, P.J., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6xs5: Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-D1
Classification: PROTEIN TRANSPORT/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2020-07-15
Authors: Chen, K.-E., Guo, Q., Collins, B.M.
PDB entry 6xs6: SARS-CoV-2 Spike D614G variant, minus RBD
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-07-15
Authors: Wang, X., Egri, S.B., Dudkina, N., Luban, J., Shen, K.
PDB entry 6xs7: Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-D2
Classification: PROTEIN TRANSPORT/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-07-15
Authors: Chen, K.-E., Guo, Q., Collins, B.M.
PDB entry 6xs8: Crystal structure of Chaetomium thermophilum Vps29 complexed with RaPID-derived cyclic peptide RT-D3
Classification: PROTEIN TRANSPORT/INHIBITOR
Source organism: Chaetomium thermophilum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9501 Å
Deposited: 2020-07-15
Authors: Chen, K.-E., Guo, Q., Collins, B.M.
PDB entry 6xs9: Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-L1
Classification: PROTEIN TRANSPORT/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2020-07-15
Authors: Chen, K.-E., Guo, Q., Collins, B.M.
PDB entry 6xsa: Crystal structure of human Vps29 complexed with RaPID-derived cyclic peptide RT-L2
Classification: PROTEIN TRANSPORT/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-07-15
Authors: Chen, K.-E., Guo, Q., Collins, B.M.
PDB entry 6xsb: Crystal structure of Staphylococcal nuclease variant Delta+PHS A132S at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-07-15
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 6xsc: Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-07-15
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 6xsd: Patient-derived B2GPI
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2020-07-15
Authors: Klenotic, P.A., Yu, E.W.Y.
PDB entry 6xse: Crystal structure of Staphylococcal nuclease variant Delta+PHS F34Y at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-07-15
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 6xsf: Crystal structure of Staphylococcal nuclease variant Delta+PHS T41V at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-07-15
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B., Poblete, M.K.
PDB entry 6xsg: Crystal structure of Staphylococcal nuclease variant Delta+PHS V66T at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-07-15
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B., Sorenson, J.L.
PDB entry 6xsh: Crystal structure of Staphylococcal nuclease variant Delta+PHS T62V at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-07-15
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 6xsi: Crystal structure of Staphylococcal nuclease variant Delta+PHS V104T at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-07-15
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 6xsj: X-ray structure of a monoclinic form of alpha amylase from Aspergillus at 1.4 A resolution
Classification: SUGAR BINDING PROTEIN
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-07-15
Authors: McPherson, A.
PDB entry 6xsk: Cryo-EM Structure of Vaccine-Elicited Rhesus Antibody 789-203-3C12 in Complex with Stabilized SI06 (A/Solomon Islands/3/06) Influenza Hemagglutinin Trimer
Classification: IMMUNE SYSTEM/Viral Protein
Source organism: Influenza A virus (A/Solomon Islands/3/2006(H1N1)); Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2020-07-15
Authors: Cerutti, G., Gorman, J., Kwong, P.D., Shapiro, L.
PDB entry 6xsn: Crystal structure of NHP VD20.5A4 Fab in complex with 16055 V1V2 1FD6 scaffold
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2020-07-15
Authors: Aljedani, S., Pancera, M.
PDB entry 6xso: GH5-4 broad specificity endoglucanase from an uncultured bacterium
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-07-15
Authors: Bingman, C.A., Smith, R.W., Glasgow, E.M., Fox, B.G.
PDB entry 6xsp: Crystal structure of E.coli DsbA in complex with 2-(2,6-bis(3-methoxyphenyl)benzofuran-3-yl)acetic acid
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-15
Authors: Wang, G., Heras, B.
PDB entry 6xsq: Crystal structure of E.coli DsbA in complex with 2-(6-(3-methoxyphenyl)-2-(4-methoxyphenyl)benzofuran-3-yl)acetic acid
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-16
Authors: Wang, G., Heras, B.
PDB entry 6xsr: Crystal structure of GluA2 AMPA receptor in complex with trans-4-butylcyclohexane carboxylic acid (4-BCCA) inhibitor
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.25 Å
Deposited: 2020-07-16
Authors: Yelshanskaya, M.V., Singh, A.K., Sobolevsky, A.I.
PDB entry 6xss: CryoEM structure of designed helical fusion protein C4_nat_HFuse-7900
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-07-16
Authors: Redler, R.L., Edman, N.I., Baker, D., Ekiert, D., Bhabha, G.
PDB entry 6xst: Recombinant Beta-2-Glycoprotein I with putative membrane insertion loop
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2020-07-16
Authors: Klenotic, P.A., Yu, E.W.Y.
PDB entry 6xsu: GH5-4 broad specificity endoglucanase from Ruminococcus flavefaciens
Classification: HYDROLASE
Source organism: Ruminococcus flavefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2020-07-16
Authors: Bingman, C.A., Smith, R.W., Glasgow, E.M., Fox, B.G.
PDB entry 6xsv: X-ray structure of a tetragonal crystal form of alpha amylase from Aspergillus oryzae (Tala-Amylase) at 1.65 A resolution
Classification: SUGAR BINDING PROTEIN
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-07-16
Authors: McPherson, A.
PDB entry 6xsw: Structure of the Notch3 NRR in complex with an antibody Fab Fragment
Classification: SIGNALING PROTEIN/Immune System
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2020-07-16
Authors: Bard, J.
PDB entry 6xsx: The structure of the catalytic module of the metalloprotease ZmpA from Clostridium perfringens
Classification: HYDROLASE
Source organism: Clostridium perfringens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-07-16
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 6xsy: The external aldimine crystal structure of Salmonella typhimurium Tryptophan Synthase mutant beta-S377A with inhibitor 2-({[4-(trifluoromethoxy)phenyl]sulfonyl}amino)ethyl dihydrogen phosphate (F9F) at the alpha-site, Cesium ion at the metal coordination site, and (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serine (KOU) at the beta-site
Classification: LYASE/LYASE INHIBITOR
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-07-16
Authors: Hilario, E., Mueller, L.J., Dunn, M.F.
PDB entry 6xsz: The structure of the M60 catalytic domain from Clostridium perfringens ZmpC
Classification: HYDROLASE
Source organism: Clostridium perfringens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-07-16
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 6xt0: Salmonella typhimurium tryptophan synthase complexed with dioxindolyl-L-alanine and D-glycerol-3-phosphate
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2020-07-16
Authors: Phillips, R.S.
PDB entry 6xt1: The structure of the M60 catalytic domain from Clostridium perfringens ZmpC in complex the sialyl T antigen
Classification: HYDROLASE
Source organism: Clostridium perfringens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2020-07-16
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 6xt2: EQADH-NADH-HEPTAFLUOROBUTANOL, P21
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-07-16
Authors: Plapp, B.V., Ramaswamy, S.
PDB entry 6xt3: Crystal structure of E.coli DsbA in complex with 3-(3-(carboxymethyl)-6-(3-methoxyphenyl)benzofuran-2-yl)benzoic acid
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2020-07-17
Authors: Wang, G., Heras, B.
PDB entry 6xt4: C3_HD-1069 (1BH-69) - fusion protein of helical bundle and repeat protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-07-17
Authors: Bick, M.J., Hsia, Y., Sankaran, B., Baker, D.
PDB entry 6xt5: Jack bean asparaginyl endopeptidase
Classification: PLANT PROTEIN, Hydrolase
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2020-07-17
Authors: Nonis, S.G., Haywood, J., Schmidberger, J.W., Bond, C.S.
PDB entry 6xt6: pro-concanavalin A: Precursor of circularly permuted concanavalin A
Classification: PLANT PROTEIN
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.103 Å
Deposited: 2020-07-17
Authors: Nonis, S.G., Haywood, J., Schmidberger, J.W., Bond, C.S.
PDB entry 6xt7: Tel25 Hybrid Four-quartet G-quadruplex with K+
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2020-07-17
Authors: Yatsunyk, L.A., McCarthy, S.E.
PDB entry 6xt8: Crystal structure of haloalkane dehalogenase variant DhaA115 domain-swapped dimer type-2
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-01-15
Authors: Markova, K., Damborsky, J., Marek, M.
PDB entry 6xt9: Subunits BBS 1,4,8,9,18 of the human BBSome complex
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-01-15
Authors: Klink, B.U., Raunser, S., Gatsogiannis, C.
PDB entry 6xta: Recombinant human butyrylcholinesterase in complex with (2S)-N-[2-(1-benzylazepan-4-yl)ethyl]-2-(butylamino)-3-(1H-indol-3-yl)propanamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-01-15
Authors: Brazzolotto, X., Nachon, F., Meden, A., Knez, D., Gobec, S.