LiteFold/PDB huggingface dataset:
PDB entry 3gvu: The crystal structure of human ABL2 in complex with GLEEVEC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-03-31
Authors: Ugochukwu, E., Salah, E., Barr, A., Mahajan, P., Shrestha, B., Savitsky, P., Chaikuad, A., Filippakopoulos, P., Roos, A., Pike, A.C.W., von Delft, F., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3gvv: Single-chain UROD Y164G (GY) mutation
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-03-31
Authors: Hill, C.P., Phillips, J.D., Whitby, F.G., Warby, C., Kushner, J.P.
PDB entry 3gvw: Single-chain UROD F217Y (YF) mutation
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-03-31
Authors: Hill, C.P., Phillips, J.D., Whitby, F.G., Warby, C., Kushner, J.P.
PDB entry 3gvx: Crystal structure of Glycerate dehydrogenase related protein from Thermoplasma acidophilum
Classification: OXIDOREDUCTASE
Source organism: Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-03-31
Authors: Syed Ibrahim, B., Kumaran, D., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gvy: Crystal structure of bacterioferritin from R.sphaeroides
Classification: METAL BINDING PROTEIN
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-03-31
Authors: Hwang, K.Y., Nam, K.H.
PDB entry 3gvz: Crystal structure of the protein CV2077 from Chromobacterium violaceum. Northeast Structural Genomics Consortium Target CvR62
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Chromobacterium violaceum ATCC 12472
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-03-31
Authors: Forouhar, F., Neely, H., Seetharaman, J., Fang, F., Xiao, R., Cunningham, K., Maglaqui, M., Owens, L., Chen, C.X., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3gw0: UROD mutant G318R
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-03-31
Authors: Hill, C.P., Phillips, J.D., Whitby, F.G., Warby, C., Kushner, J.P.
PDB entry 3gw1: The structure of the Caulobacter crescentus CLPs protease adaptor protein in complex with FGG tripeptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Caulobacter vibrioides; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2009-03-31
Authors: Baker, T.A., Roman-Hernandez, G., Sauer, R.T., Grant, R.A.
PDB entry 3gw2: Crystal structure of possible transcriptional regulatory protein (fragment 1-100) from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR242E.
Classification: TRANSCRIPTION REGULATOR
Source organism: Mycobacterium bovis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-03-31
Authors: Kuzin, A.P., Su, M., Seetharaman, J., Mao, M., Xiao, R., Ciccosanti, C., Wang, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3gw3: human UROD mutant K297N
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-03-31
Authors: Hill, C.P., Phillips, J.D., Whitby, F.G., Warby, C., Kushner, J.P.
PDB entry 3gw4: Crystal structure of uncharacterized protein from Deinococcus radiodurans. Northeast Structural Genomics Consortium Target DrR162B.
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2009-03-31
Authors: Kuzin, A.P., Abashidze, M., Seetharaman, J., Sahdev, S., Xiao, R., Foote, E.L., Ciccosanti, C., Wang, H., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3gw5: Crystal structure of human renin complexed with a novel inhibitor
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-03-31
Authors: Wu, Z., McKeever, B.M.
PDB entry 3gw6: Intramolecular Chaperone
Classification: CHAPERONE
Source organism: Enterobacteria phage K1F
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-03-31
Authors: Schulz, E.C., Dickmanns, A., Ficner, R.
PDB entry 3gw7: Crystal structure of a metal-dependent phosphohydrolase with conserved HD domain (yedJ) from Escherichia coli in complex with nickel ions. Northeast Structural Genomics Consortium Target ER63
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2009-03-31
Authors: Forouhar, F., Abashidze, M., Seetharaman, J., Janjua, J., Xiao, R., Cunningham, K., Ma, L., Zhao, L., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3gw8: Crystal structure of phosphoglyceromutase from Burkholderia pseudomallei with vanadate and glycerol
Classification: ISOMERASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2009-03-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3gw9: Crystal structure of sterol 14-alpha demethylase (CYP51) from Trypanosoma brucei bound to an inhibitor N-(1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxaziazol-2-yl)benzamide
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2009-03-31
Authors: Lepesheva, G.I., Hargrove, T.Y., Harp, J., Wawrzak, Z., Waterman, M.R.
PDB entry 3gwa: 1.6 Angstrom crystal structure of 3-oxoacyl-(acyl-carrier-protein) synthase III
Classification: TRANSFERASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-03-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3gwb: Crystal structure of peptidase M16 inactive domain from Pseudomonas fluorescens. Northeast Structural Genomics target PlR293L
Classification: HYDROLASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-03-31
Authors: Seetharaman, J., Chen, Y., Fang, F., Xiao, R., Everett, J.K., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3gwc: Crystal structure of Mycobacterium tuberculosis thymidylate synthase X bound to FdUMP and FAD
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-03-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3gwd: Closed crystal structure of cyclohexanone monooxygenase
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-03-31
Authors: Mirza, I.A., Yachnin, B.J., Berghuis, A.M.
PDB entry 3gwe: 2.1 Angstrom crystal structure of 3-oxoacyl-(acyl-carrier-protein) synthase III
Classification: TRANSFERASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-03-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3gwf: Open crystal structure of cyclohexanone monooxygenase
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-01
Authors: Mirza, I.A., Yachnin, B.J., Berghuis, A.M.
PDB entry 3gwg: Crystal structure of CheY of Helicobacter pylori
Classification: SIGNALING PROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-04-01
Authors: Lam, K.H., Ling, T.K., Au, S.W.
PDB entry 3gwh: Crystallographic Ab Initio protein solution far below atomic resolution
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-04-01
Authors: Rodriguez, D.D., Grosse, C., Himmel, S., Gonzalez, C., Becker, S., Sheldrick, G.M., Uson, I.
PDB entry 3gwi: Crystal Structure of Mg-ATPase Nucleotide binding domain
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-04-01
Authors: Hakansson, K.O.
PDB entry 3gwj: Crystal structure of Antheraea pernyi arylphorin
Classification: OXYGEN TRANSPORT
Source organism: Antheraea pernyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2009-04-01
Authors: Ryu, K.S., Lee, J.O., Kwon, T.H., Kim, S.
PDB entry 3gwk: Structure of the homodimeric WXG-100 family protein from Streptococcus agalactiae
Classification: VIRAL PROTEIN
Source organism: Streptococcus agalactiae serogroup V
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-04-01
Authors: Poulsen, C., Gries, F., Wilmanns, M., Song, Y.H.
PDB entry 3gwl: Crystal structure of ASFV pB119L, a viral sulfhydryl oxidase
Classification: OXIDOREDUCTASE
Source organism: African swine fever virus BA71V
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-01
Authors: Hakim, M., Fass, D.
PDB entry 3gwm: Crystal structure of the holo-[Acyl-Carrier-Protein] Synthase (ACPS) from Mycobacterium smegmatis
Classification: TRANSFERASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-04-01
Authors: Poulsen, C., Wilmanns, M., Song, Y.H.
PDB entry 3gwn: Crystal structure of the FAD binding domain from mimivirus sulfhydryl oxidase R596
Classification: OXIDOREDUCTASE
Source organism: Acanthamoeba polyphaga mimivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2009-04-01
Authors: Hakim, M., Fass, D.
PDB entry 3gwo: Structure of the C-terminal Domain of a Putative HIV-1 gp41 Fusion Intermediate
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 lw12.3 isolate
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-04-01
Authors: Liu, J.
PDB entry 3gwp: Crystal structure of carbon-sulfur lyase involved in aluminum resistance (YP_878183.1) from CLOSTRIDIUM NOVYI NT at 2.90 A resolution
Classification: LYASE
Source organism: Clostridium novyi NT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-04-01
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gwq: Crystal structure of a putative d-serine deaminase (bxe_a4060) from burkholderia xenovorans lb400 at 2.00 A resolution
Classification: LYASE
Source organism: Burkholderia xenovorans LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-01
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gwr: Crystal structure of Putative calcium/calmodulin-dependent protein kinase type II association domain (YP_315894.1) from THIOBACILLUS DENITRIFICANS ATCC 25259 at 2.00 A resolution
Classification: PROTEIN BINDING
Source organism: Thiobacillus denitrificans ATCC 25259
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2009-04-01
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gws: Crystal Structure of T3-Bound Thyroid Hormone Receptor
Classification: Hormone activator
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-01
Authors: Nascimento, A.S., Dias, S.M.G., Nunes, F.M., Aparicio, R., Polikarpov, I., Baxter, J.D., Webb, P.
PDB entry 3gwt: Catalytic domain of human phosphodiesterase 4B2B in complex with a quinoline inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-04-01
Authors: Somers, D.O., Neu, M.
PDB entry 3gwu: Leucine transporter LeuT in complex with sertraline
Classification: TRANSPORT PROTEIN
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2009-04-01
Authors: Zhou, Z., Zhen, J., Karpowich, N.K., Law, C.J., Reith, M.E.A., Wang, D.N.
PDB entry 3gwv: Leucine transporter LeuT in complex with R-fluoxetine
Classification: TRANSPORT PROTEIN
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-04-01
Authors: Zhou, Z., Zhen, J., Karpowich, N.K., Law, C.J., Reith, M.E.A., Wang, D.N.
PDB entry 3gww: Leucine transporter LeuT in complex with S-fluoxetine
Classification: TRANSPORT PROTEIN
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2009-04-01
Authors: Zhou, Z., Zhen, J., Karpowich, N.K., Law, C.J., Reith, M.E.A., Wang, D.N.
PDB entry 3gwx: MOLECULAR RECOGNITION OF FATTY ACIDS BY PEROXISOME PROLIFERATOR-ACTIVATED RECEPTORS
Classification: TRANSCRIPTION REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 1999-04-26
Authors: Xu, H.E., Lambert, M.H., Montana, V.G., Parks, D.J., Blanchard, S.G., Brown, P.J., Sternbach, D.D., Lehmann, J.M., Wisely, G.B., Willson, T.M., Kliewer, S.A., Milburn, M.V.
PDB entry 3gwy: Crystal structure of putative CTP pyrophosphohydrolase from Bacteroides fragilis
Classification: HYDROLASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-01
Authors: Patskovsky, Y., Romero, R., Gilmore, M., Do, J., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gwz: Structure of the Mitomycin 7-O-methyltransferase MmcR
Classification: TRANSFERASE
Source organism: Streptomyces lavendulae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2009-04-01
Authors: Singh, S., Chang, A., Bingman, C.A., Phillips Jr., G.N., Thorson, J.S.
PDB entry 3gx0: Crystal Structure of GSH-dependent Disulfide bond Oxidoreductase
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-01
Authors: Ladner, J.E., Harp, J.M., Wadington, M.C., Armstrong, R.N.
PDB entry 3gx1: Crystal structure of a domain of lin1832 from Listeria innocua
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Listeria innocua Clip11262
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-01
Authors: Tan, K., Rakowski, E., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3gx2: TteSAM-I riboswitch variant A94GU34C bound to sinefungin
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-04-01
Authors: Montange, R.K., Batey, R.T.
PDB entry 3gx3: Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAH
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-04-01
Authors: Montange, R.K., Batey, R.T.
PDB entry 3gx4: Crystal Structure Analysis of S. Pombe ATL in complex with DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Schizosaccharomyces pombe; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-04-01
Authors: Tubbs, J.L., Arvai, A.S., Tainer, J.A.
PDB entry 3gx5: Crystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAM
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2009-04-01
Authors: Montange, R.K., Batey, R.T.
PDB entry 3gx6: Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAM in manganese chloride
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-04-01
Authors: Montange, R.K., Batey, R.T.
PDB entry 3gx7: Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G mutant A6C/U7G/A87C/U88G bound with SAM
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2009-04-01
Authors: Montange, R.K., Batey, R.T.
PDB entry 3gx8: Structural and biochemical characterization of yeast monothiol glutaredoxin Grx5
Classification: ELECTRON TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.673 Å
Deposited: 2009-04-01
Authors: Wang, Y., He, Y.X., Yu, J., Xiong, Y., Chen, Y., Zhou, C.Z.
PDB entry 3gx9: Structure of morphinone reductase N189A mutant in complex with tetrahydroNAD
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2009-04-02
Authors: Lafite, P., Scrutton, N.S., Leys, D.
PDB entry 3gxa: Crystal structure of GNA1946
Classification: PROTEIN BINDING
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-04-02
Authors: Yang, X., Shen, Y.
PDB entry 3gxb: Crystal structure of VWF A2 domain
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-02
Authors: Zhou, Y.F., Springer, T.A.
PDB entry 3gxd: Crystal structure of Apo acid-beta-glucosidase pH 4.5
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-02
Authors: Lieberman, R.L.
PDB entry 3gxe: Complex of a Low Affinity Collagen Site with the Fibronectin 8-9FnI Domain Pair
Classification: CELL ADHESION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-04-02
Authors: Sladek, B., Campbell, I.D., Vakonakis, I.
PDB entry 3gxf: Crystal structure of acid-beta-glucosidase with isofagomine at neutral pH
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-02
Authors: Lieberman, R.L.
PDB entry 3gxg: Crystal structure of Putative phosphatase (DUF442) (YP_001181608.1) from SHEWANELLA PUTREFACIENS CN-32 at 1.60 A resolution
Classification: HYDROLASE
Source organism: Shewanella putrefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-04-02
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gxh: Crystal structure of Putative phosphatase (DUF442) (YP_001181608.1) from SHEWANELLA PUTREFACIENS CN-32 at 1.40 A resolution
Classification: HYDROLASE
Source organism: Shewanella putrefaciens CN-32
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-04-02
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gxi: Crystal structure of acid-beta-glucosidase at pH 5.5
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2009-04-02
Authors: Lieberman, R.L.
PDB entry 3gxk: The crystal structure of g-type lysozyme from Atlantic cod (Gadus morhua L.) in complex with NAG oligomers sheds new light on substrate binding and the catalytic mechanism. Native structure to 1.9
Classification: HYDROLASE
Source organism: Gadus morhua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-02
Authors: Helland, R., Larsen, R.L., Finstad, S., Kyomuhendo, P., Larsen, A.N.
PDB entry 3gxl: ALK-5 kinase complex with GW857175
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-04-02
Authors: Smith, W., Janson, C.
PDB entry 3gxm: Crystal structure of acid-beta-glucosidase at pH 4.5, phosphate crystallization condition
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-02
Authors: Lieberman, R.L.
PDB entry 3gxn: Crystal structure of apo alpha-galactosidase A at pH 4.5
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2009-04-02
Authors: Lieberman, R.L.
PDB entry 3gxo: Structure of the Mitomycin 7-O-methyltransferase MmcR with bound Mitomycin A
Classification: TRANSFERASE
Source organism: Streptomyces lavendulae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-02
Authors: Singh, S., Chang, A., Bingman, C.A., Phillips Jr., G.N., Thorson, J.S.
PDB entry 3gxp: Crystal structure of acid-alpha-galactosidase A complexed with galactose at pH 4.5
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-02
Authors: Lieberman, R.L.
PDB entry 3gxq: Structure of ArtA and DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Staphylococcus aureus subsp. aureus USA300; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-04-02
Authors: Ni, L., Firth, N., Schumacher, M.A.
PDB entry 3gxr: The crystal structure of g-type lysozyme from Atlantic cod (Gadus morhua L.) in complex with NAG oligomers sheds new light on substrate binding and the catalytic mechanism. Structure with NAG to 1.7
Classification: HYDROLASE
Source organism: Gadus morhua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-04-02
Authors: Helland, R., Larsen, R.L., Finstad, S., Kyomuhendo, P., Larsen, A.N.
PDB entry 3gxt: Crystal structure of alpha-galactosidase A at pH 4.5 complexed with 1-deoxygalactonijirimycin
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-04-02
Authors: Lieberman, R.L.
PDB entry 3gxu: Crystal structure of Eph receptor and ephrin complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-03
Authors: Qin, H.N., Song, J.X.
PDB entry 3gxv: Three-dimensional structure of N-terminal domain of DnaB Helicase from Helicobacter pylori and its interactions with primase
Classification: HYDROLASE/REPLICATION
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-03
Authors: Kashav, T., Nitharwal, R., Syed, A.A., Gabdoulkhakov, A., Saenger, W., Dhar, K.S., Gourinath, S.
PDB entry 3gxw: Structure of the SH2 domain of the Candida glabrata transcription elongation factor Spt6, crystal form A
Classification: TRANSCRIPTION
Source organism: Candida glabrata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-03
Authors: Dengl, S., Mayer, A., Sun, M., Cramer, P.
PDB entry 3gxx: Structure of the SH2 domain of the Candida glabrata transcription elongation factor Spt6, crystal form B
Classification: TRANSCRIPTION
Source organism: Candida glabrata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-03
Authors: Dengl, S., Mayer, A., Sun, M., Cramer, P.
PDB entry 3gxy: Crystal structure of cyanovirin-n complexed to a synthetic hexamannoside
Classification: ANTIVIRAL PROTEIN
Source organism: Nostoc ellipsosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-03
Authors: Botos, I., O'Keefe, B.R., Shenoy, S.R., Seeberger, P.H., Boyd, M.R., Wlodawer, A.
PDB entry 3gxz: Crystal structure of cyanovirin-n complexed to oligomannose-9 (man-9)
Classification: ANTIVIRAL PROTEIN
Source organism: Nostoc ellipsosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-03
Authors: Botos, I., O'Keefe, B.R., Shenoy, S.R., Seeberger, P.H., Boyd, M.R., Wlodawer, A.
PDB entry 3gy0: Crystal structure of putatitve short chain dehydrogenase FROM SHIGELLA FLEXNERI 2A STR. 301 complexed with NADP
Classification: OXIDOREDUCTASE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-04-03
Authors: Malashkevich, V.N., Toro, R., Morano, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gy1: CRYSTAL STRUCTURE OF putative mandelate racemase/muconate lactonizing protein from Clostridium beijerinckii NCIMB 8052
Classification: ISOMERASE
Source organism: Clostridium beijerinckii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-04-03
Authors: Malashkevich, V.N., Toro, R., Morano, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gy2: A comparative study on the inhibition of bovine beta-trypsin by bis-benzamidines diminazene and pentamidine by X-ray crystallography and ITC
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2009-04-03
Authors: Perilo, C.S., Pereira, M.T., Santoro, M.M., Nagem, R.A.P.
PDB entry 3gy3: A comparative study on the inhibition of bovine beta-trypsin by bis-benzamidines diminazene and pentamidine by X-ray crystallography and ITC
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-04-03
Authors: Perilo, C.S., Pereira, M.T., Santoro, M.M., Nagem, R.A.P.
PDB entry 3gy4: A comparative study on the inhibition of bovine beta-trypsin by bis-benzamidines diminazene and pentamidine by X-ray crystallography and ITC
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-04-03
Authors: Perilo, C.S., Pereira, M.T., Santoro, M.M., Nagem, R.A.P.
PDB entry 3gy5: A comparative study on the inhibition of bovine beta-trypsin by bis-benzamidines diminazene and pentamidine by X-ray crystallography and ITC
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2009-04-03
Authors: Perilo, C.S., Pereira, M.T., Santoro, M.M., Nagem, R.A.P.
PDB entry 3gy6: A comparative study on the inhibition of bovine beta-trypsin by the bis-benzamidines diminazene and pentamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-04-03
Authors: Perilo, C.S., Pereira, M.T., Santoro, M.M., Nagem, R.A.P.
PDB entry 3gy7: A comparative study on the inhibition of bovine beta-trypsin by bis-benzamidines diminazene and pentamidine by X-ray crystallography and ITC
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-04-03
Authors: Perilo, C.S., Pereira, M.T., Santoro, M.M., Nagem, R.A.P.
PDB entry 3gy8: A comparative study on the inhibition of bovine beta-trypsin by bis-benzamidines diminazene and pentamidine by X-ray crystallography and ITC
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-04-03
Authors: Perilo, C.S., Pereira, M.T., Santoro, M.M., Nagem, R.A.P.
PDB entry 3gy9: Crystal structure of putative acetyltransferase (YP_001815201.1) from EXIGUOBACTERIUM SP. 255-15 at 1.52 A resolution
Classification: TRANSFERASE
Source organism: Exiguobacterium sibiricum 255-15
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2009-04-03
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gya: Crystal structure of putative acetyltransferase (YP_001815201.1) from EXIGUOBACTERIUM SP. 255-15 at 1.62 A resolution
Classification: TRANSFERASE
Source organism: Exiguobacterium sibiricum 255-15
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2009-04-03
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gyb: Crystal structure of a LacI-family transcriptional regulatory protein from Corynebacterium glutamicum
Classification: transcription regulator
Source organism: Corynebacterium glutamicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-04-03
Authors: Palani, K., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gyc: Crystal structure of putative glycoside hydrolase (YP_001304622.1) from Parabacteroides distasonis ATCC 8503 at 1.85 A resolution
Classification: HYDROLASE
Source organism: Parabacteroides distasonis ATCC 8503
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-04-03
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gyd: Crystal structure of a cyclic nucleotide-binding domain (mfla_1926) from methylobacillus flagellatus kt at 1.79 A resolution
Classification: DNA BINDING PROTEIN
Source organism: Methylobacillus flagellatus KT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2009-04-03
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gye: Didydroorotate dehydrogenase from Leishmania major
Classification: OXIDOREDUCTASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-03
Authors: Cordeiro, A.T., Feliciano, P.R., Nonato, M.C.
PDB entry 3gyf: Human DHFR with Z-isomer in Orthorhombic lattice
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-04-03
Authors: Cody, V.
PDB entry 3gyg: Crystal structure of yhjK (haloacid dehalogenase-like hydrolase protein) from Bacillus subtilis
Classification: HYDROLASE
Source organism: Bacillus subtilis subsp. subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2009-04-03
Authors: Nocek, B., Stein, A., Wu, R., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3gyh: Crystal Structure Analysis of S. Pombe ATL in complex with damaged DNA containing POB
Classification: DNA BINDING PROTEIN/DNA
Source organism: Schizosaccharomyces pombe; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-04-03
Authors: Tubbs, J.L., Arvai, A.S., Tainer, J.A., Shin, D.S.
PDB entry 3gyi: Cholesterol oxidase from Streptomyces sp. N485D mutant (1.0A)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2009-04-03
Authors: Lyubimov, A.Y., Vrielink, A.
PDB entry 3gyj: Cholesterol oxidase from Streptomyces sp. N485L mutant (0.92A)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 0.92 Å
Deposited: 2009-04-03
Authors: Lyubimov, A.Y., Vrielink, A.
PDB entry 3gyk: The crystal structure of a thioredoxin-like oxidoreductase from Silicibacter pomeroyi DSS-3
Classification: OXIDOREDUCTASE
Source organism: Silicibacter pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2009-04-03
Authors: Fan, Y., Marshall, N., Keigher, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3gyl: Structure of Prostasin at 1.3 Angstroms resolution in complex with a Calcium Ion.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-04-03
Authors: Spraggon, G., Hornsby, M., Shipway, A., Harris, J.L., Lesley, S.A.
PDB entry 3gym: Structure of Prostasin in Complex with Aprotinin
Classification: HYDROLASE/INHIBITOR
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-04-03
Authors: Spraggon, G., Hornsby, M., Shipway, A., Harris, J.L., Lesley, S.A.
PDB entry 3gyn: Crystal structure of HCV NS5B polymerase with a novel monocyclic dihydropyridinone inhibitor
Classification: TRANSFERASE
Source organism: Hepatitis C virus (isolate BK)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-04-04
Authors: Zhao, Q., Showalter, R.E., Han, Q., Kissinger, C.R.
PDB entry 3gyo: Se-Met Rtt106p
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-04-04
Authors: Liu, Y., Huang, H., Shi, Y., Teng, M.
PDB entry 3gyp: Rtt106p
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.406 Å
Deposited: 2009-04-04
Authors: Liu, Y., Huang, H., Shi, Y., Teng, M.
PDB entry 3gyq: Structure of the Thiostrepton-Resistance Methyltransferase S-adenosyl-L-methionine Complex
Classification: TRANSFERASE
Source organism: Streptomyces cyaneus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2009-04-04
Authors: Dunstan, M.S., Conn, G.L.
PDB entry 3gyr: Structure of Phenoxazinone synthase from Streptomyces antibioticus reveals a new type 2 copper center.
Classification: OXIDOREDUCTASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-05
Authors: Smith, A.W., Camara-Artigas, A., Wang, M., Francisco, W.A., Allen, J.P.
PDB entry 3gys: Crystal structure determination of cat (Felis silvestris catus) hemoglobin at 2.9 angstrom resolution
Classification: Oxygen storage, Oxygen transport
Source organism: Felis silvestris catus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-04-05
Authors: Balasubramanian, M., Sathya Moorthy, P., Neelagandan, K., Ponnuswamy, M.N.
PDB entry 3gyt: Nuclear receptor DAF-12 from parasitic nematode Strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 4
Classification: TRANSCRIPTION
Source organism: Strongyloides stercoralis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-05
Authors: Zhou, X.E., Wang, Z., Suino-Powell, K., Motola, D.L., Conneely, A., Ogata, C., Sharma, K.K., Auchus, R.J., Kliewer, S.A., Xu, H.E., Mangelsdorf, D.J.
PDB entry 3gyu: Nuclear receptor DAF-12 from parasitic nematode Strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 7
Classification: TRANSCRIPTION
Source organism: Strongyloides stercoralis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-05
Authors: Zhou, X.E., Wang, Z., Suino-Powell, K., Motola, D.L., Conneely, A., Ogata, C., Sharma, K.K., Auchus, R.J., Kliewer, S.A., Xu, H.E., Mangelsdorf, D.J.
PDB entry 3gyv: Crystal structure of nucleosome assembly protein from Plasmodium falciparum
Classification: CHAPERONE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-04-06
Authors: Yogavel, M., Gill, J., Sharma, A.
PDB entry 3gyw: Crystal structure of nucleosome assembly protein from Plasmodium falciparum at 2.4 A resolution
Classification: CHAPERONE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-06
Authors: Yogavel, M., Gill, J., Sharma, A.
PDB entry 3gyx: Crystal structure of adenylylsulfate reductase from Desulfovibrio gigas
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio gigas
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-04-06
Authors: Chiang, Y.-L., Hsieh, Y.-C., Liu, E.-H., Liu, M.-Y., Chen, C.-J.
PDB entry 3gyy: The ectoine binding protein of the TeaABC TRAP transporter TeaA in the Apo-State
Classification: TRANSPORT PROTEIN
Source organism: Halomonas elongata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-06
Authors: Kuhlmann, S.I., Terwisscha Van Scheltinga, A.C., Ziegler, C.
PDB entry 3gyz: Crystal structure of IpgC from Shigella flexneri
Classification: CHAPERONE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-04-06
Authors: Lunelli, M., Lokareddy, R.K., Zychlinsky, A., Kolbe, M.
PDB entry 3gz0: Apo-human carbonic anhydrase II revisited: Implications of the loss of a metal in protein structure, stability and solvent network
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2009-04-06
Authors: Avvaru, B.S., McKenna, R.
PDB entry 3gz1: Crystal structure of IpgC in complex with the chaperone binding region of IpaB
Classification: CHAPERONE
Source organism: Shigella flexneri; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-04-06
Authors: Lunelli, M., Lokareddy, R.K., Zychlinsky, A., Kolbe, M.
PDB entry 3gz2: Crystal structure of IpgC in complex with an IpaB peptide
Classification: CHAPERONE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2009-04-06
Authors: Lokareddy, R.K., Lunelli, M., Kolbe, M.
PDB entry 3gz3: Leishmania major Dihydroorotate Dehydrogenase in complex with orotate
Classification: OXIDOREDUCTASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-06
Authors: Cordeiro, A.T., Feliciano, P.R., Nonato, M.C.
PDB entry 3gz4: Crystal structure of putative short chain dehydrogenase FROM ESCHERICHIA COLI CFT073 complexed with NADPH
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli O6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-06
Authors: Malashkevich, V.N., Toro, R., Morano, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gz5: Crystal structure of Shewanella oneidensis NrtR
Classification: DNA BINDING PROTEIN
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-06
Authors: Huang, N., Zhang, H.
PDB entry 3gz6: Crystal structure of Shewanella oneidensis NrtR complexed with a 27mer DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Shewanella oneidensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.901 Å
Deposited: 2009-04-06
Authors: Huang, N., Zhang, H.
PDB entry 3gz7: Crystal structure of Putative antibiotic biosynthesis monooxygenase (NP_888398.1) from BORDETELLA BRONCHISEPTICA at 2.15 A resolution
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bordetella bronchiseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-04-06
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gz8: Cocrystal structure of NUDIX domain of Shewanella oneidensis NrtR complexed with ADP ribose
Classification: DNA BINDING PROTEIN
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2009-04-06
Authors: Huang, N., Zhang, H.
PDB entry 3gz9: Crystal Structure of Peroxisome Proliferator-Activated Receptor Delta (PPARd) in Complex with a Full Agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-06
Authors: Wang, Z., Sudom, A., Walker, N.P.
PDB entry 3gza: Crystal structure of putative alpha-L-fucosidase (NP_812709.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.60 A resolution
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-04-06
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gzb: Crystal structure of putative SnoaL-like polyketide cyclase (YP_001182657.1) from Shewanella putrefaciens CN-32 at 1.44 A resolution
Classification: LYASE
Source organism: Shewanella putrefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2009-04-06
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gzc: Structure of human selenocysteine lyase
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-07
Authors: Collins, R., Hogbom, M., Arrowsmith, C., Berglund, H., Edwards, A., Ehn, M., Flodin, S., Flores, A., Graslund, S., Hallberg, B.M., Hammarstrom, M., Karlberg, T., Kotenyova, T., Nilsson-Ehle, P., Nordlund, P., Nyman, T., Ogg, D., Persson, C., Sagemark, J., Stenmark, P., Sundstrom, M., Thorsell, A.G., Uppenberg, J., Van Den Berg, S., Weigelt, J., Holmberg-Schiavone, L., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3gzd: Human selenocysteine lyase, P1 crystal form
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-04-07
Authors: Karlberg, T., Hogbom, M., Arrowsmith, C.H., Berglund, H., Bountra, C., Collins, R., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Kotenyova, T., Moche, M., Nordlund, P., Nyman, T., Persson, C., Sagemark, J., Schutz, P., Siponen, M.I., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Weigelt, J., Welin, M., Wisniewska, M., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3gze: Algal prolyl 4-hydroxylase complexed with zinc and (Ser-Pro)5 peptide substrate
Classification: HYDROLASE
Source organism: Chlamydomonas reinhardtii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2009-04-07
Authors: Koski, M.K., Wierenga, R.K.
PDB entry 3gzf: Structure of the C-terminal domain of nsp4 from Feline Coronavirus
Classification: VIRAL PROTEIN
Source organism: Feline coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.756 Å
Deposited: 2009-04-07
Authors: Manolaridis, I., Wojdyla, J.A., Panjikar, S., Snijder, E.J., Gorbalenya, A.E., Coutard, B., Tucker, P.A.
PDB entry 3gzg: Crystal structure of the Xanthomonas axonopodis pv. citri molybdate-binding protein (ModA) mutant (K127S)
Classification: METAL BINDING PROTEIN
Source organism: Xanthomonas axonopodis pv. citri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-04-07
Authors: Santacruz-Perez, C., Pegos, V.R., Balan, A., Barbosa, J.A.R.G.
PDB entry 3gzh: Crystal structure of phosphate-bound adenylosuccinate lyase from E. coli
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-07
Authors: Kozlov, G., Gehring, K., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
PDB entry 3gzi: CRYSTAL STRUCTURE OF a transcriptional regulator of the tetR family (SHEW_3567) FROM SHEWANELLA LOIHICA PV-4 AT 2.05 A RESOLUTION
Classification: TRANSCRIPTION
Source organism: Shewanella loihica PV-4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-04-07
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gzj: Crystal Structure of Polyneuridine Aldehyde Esterase Complexed with 16-epi-Vellosimine
Classification: HYDROLASE
Source organism: Rauvolfia serpentina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2009-04-07
Authors: Yang, L., Hill, M., Wang, M., Panjikar, S., Stoeckigt, J.
PDB entry 3gzk: Structure of A. Acidocaldarius Cellulase CelA
Classification: HYDROLASE
Source organism: Alicyclobacillus acidocaldarius subsp. acidocaldarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-04-07
Authors: Morera, S., Eckert, K., Vigouroux, A.
PDB entry 3gzl: Crystal Structure of holo PfACP Disulfide-Linked Dimer
Classification: BIOSYNTHETIC PROTEIN
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2009-04-07
Authors: Gallagher, J.R., Prigge, S.T.
PDB entry 3gzm: Crystal Structure of holo PfACP Reduced Monomer
Classification: BIOSYNTHETIC PROTEIN
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-04-07
Authors: Gallagher, J.R., Prigge, S.T.
PDB entry 3gzn: Structure of NEDD8-activating enzyme in complex with NEDD8 and MLN4924
Classification: PROTEIN BINDING/Ligase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-04-07
Authors: Sintchak, M.D.
PDB entry 3gzo: HUMAN SOD1 G93A Variant
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-07
Authors: Galaleldeen, A., Taylor, A.B., Narayana, N., Whitson, L.J., Hart, P.J.
PDB entry 3gzp: HUMAN SOD1 G93A Metal-free Variant
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-04-07
Authors: Galaleldeen, A., Taylor, A.B., Whitson, L.J., Hart, P.J.
PDB entry 3gzq: HUMAN SOD1 A4V Metal-free Variant
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.401 Å
Deposited: 2009-04-07
Authors: Galaleldeen, A., Taylor, A.B., Whitson, L.J., Hart, P.J.
PDB entry 3gzr: CRYSTAL STRUCTURE OF AN UNCHARACTERIZED PROTEIN WITH A CYSTATIN-LIKE FOLD (CC_2572) FROM CAULOBACTER VIBRIOIDES AT 1.40 A RESOLUTION
Classification: UNKNOWN FUNCTION
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-04-07
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gzs: Crystal structure of a susd superfamily protein (bf3413) from bacteroides fragilis nctc 9343 at 2.10 A resolution
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2009-04-07
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gzt: VP7 recoated rotavirus DLP
Classification: VIRUS
Source organism: Rhesus rotavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2009-04-07
Authors: Chen, J.Z., Settembre, E.C., Harrison, S.C., Grigorieff, N.
PDB entry 3gzu: VP7 recoated rotavirus DLP
Classification: VIRUS
Source organism: Rhesus Rotavirus; Rotavirus A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2009-04-07
Authors: Chen, J.Z., Settembre, E.C., Harrison, S.C., Grigorieff, N.
PDB entry 3gzx: Crystal Structure of the Biphenyl Dioxygenase in complex with Biphenyl from Comamonas testosteroni Sp. Strain B-356
Classification: OXIDOREDUCTASE
Source organism: Comamonas testosteroni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2009-04-08
Authors: Kumar, P., Colbert, C.L., Bolin, J.T.
PDB entry 3gzy: Crystal Structure of the Biphenyl Dioxygenase from Comamonas testosteroni Sp. Strain B-356
Classification: OXIDOREDUCTASE
Source organism: Comamonas testosteroni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2009-04-08
Authors: Kumar, P., Colbert, C.L., Bolin, J.T.
PDB entry 3h00: Structure of the C-terminal Domain of a Putative HIV-1 gp41 Fusion Intermediate
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 lw12.3 isolate
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-08
Authors: Liu, J.
PDB entry 3h01: Structure of the C-terminal Domain of a Putative HIV-1 gp41 Fusion Intermediate
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 lw12.3 isolate
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-04-08
Authors: Liu, J.
PDB entry 3h02: 2.15 Angstrom Resolution Crystal Structure of Naphthoate Synthase from Salmonella typhimurium.
Classification: LYASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-04-08
Authors: Minasov, G., Wawrzak, Z., Skarina, T., Onopriyenko, O., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3h03: Crystal structure of the binding domain of the AMPA subunit GluR2 bound to UBP277
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-08
Authors: Ahmed, A.H., Oswald, R.E.
PDB entry 3h04: The crystal structure of the protein with unknown function from Staphylococcus aureus subsp. aureus Mu50
Classification: structural genomics, unknown function
Source organism: Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-08
Authors: Zhang, R., Tesar, C., Sather, A., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3h05: The Crystal Structure of a Putative Nicotinate-nucleotide Adenylyltransferase from Vibrio parahaemolyticus
Classification: structural genomics, unknown function
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-04-08
Authors: Stein, A.J., Cuff, M.E., Sather, A., Shackelford, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)