LiteFold/PDB huggingface dataset:
PDB entry 6a5n: Crystal structure of Arabidopsis thaliana SUVH6 in complex with methylated DNA
Classification: GENE REGULATION/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-06-24
Authors: Li, X., Du, J.
PDB entry 6a5o: RNA polymerase II elongation complex stalled at SHL(-6) of the nucleosome
Classification: TRANSCRIPTION/RNA/DNA
Source organism: Homo sapiens; Komagataella phaffii (strain GS115 / ATCC 20864); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.9 Å
Deposited: 2018-06-25
Authors: Kujirai, T., Ehara, H., Fujino, Y., Shirouzu, M., Sekine, S., Kurumizaka, H.
PDB entry 6a5p: RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome
Classification: TRANSCRIPTION/RNA/DNA
Source organism: Homo sapiens; Komagataella phaffii (strain GS115 / ATCC 20864); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2018-06-25
Authors: Kujirai, T., Ehara, H., Fujino, Y., Shirouzu, M., Sekine, S., Kurumizaka, H.
PDB entry 6a5q: Structure of 14-3-3 beta in complex with TFEB 14-3-3 binding motif
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-06-25
Authors: Xu, Y., Ren, J.Q., Feng, W.
PDB entry 6a5r: RNA polymerase II elongation complex stalled at SHL(-2) of the nucleosome
Classification: TRANSCRIPTION/RNA/DNA
Source organism: Homo sapiens; Komagataella phaffii (strain GS115 / ATCC 20864); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.7 Å
Deposited: 2018-06-25
Authors: Kujirai, T., Ehara, H., Fujino, Y., Shirouzu, M., Sekine, S., Kurumizaka, H.
PDB entry 6a5s: Structure of 14-3-3 gamma in complex with TFEB 14-3-3 binding motif
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.099 Å
Deposited: 2018-06-25
Authors: Xu, Y., Ren, J.Q., Feng, W.
PDB entry 6a5t: RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome
Classification: TRANSCRIPTION/RNA/DNA
Source organism: Homo sapiens; Komagataella phaffii (strain GS115 / ATCC 20864); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2018-06-25
Authors: Kujirai, T., Ehara, H., Fujino, Y., Shirouzu, M., Sekine, S., Kurumizaka, H.
PDB entry 6a5u: RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA, tilt conformation
Classification: TRANSCRIPTION/RNA/DNA
Source organism: Homo sapiens; Komagataella phaffii (strain GS115 / ATCC 20864); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.6 Å
Deposited: 2018-06-25
Authors: Kujirai, T., Ehara, H., Fujino, Y., Shirouzu, M., Sekine, S., Kurumizaka, H.
PDB entry 6a5w: FXR-LBD with HNC143 and SRC1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2018-06-25
Authors: Wang, N., Liu, J.
PDB entry 6a5x: FXR-LBD with HNC180 and SRC1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-06-25
Authors: Wang, N., Liu, J.
PDB entry 6a5y: Crystal structure of human FXR/RXR-LBD heterodimer bound to HNC143 and 9cRA and SRC1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-06-25
Authors: Wang, N., Liu, J.
PDB entry 6a5z: Crystal structure of human FXR/RXR-LBD heterodimer bound to HNC180 and 9cRA and SRC1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2018-06-25
Authors: Wang, N., Liu, J.
PDB entry 6a60: Crystal structure of human FXR/RXR-LBD heterodimer bound to GW4064 and 9cRA and SRC1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2018-06-25
Authors: Wang, N., Liu, J.
PDB entry 6a62: Placental protein 13/galectin-13 variant R53HH57RD33G with Lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2018-06-26
Authors: Su, J.
PDB entry 6a63: Placental protein 13/galectin-13 variant R53HH57R with Lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2018-06-26
Authors: Su, J.
PDB entry 6a64: Placental protein 13/galectin-13 variant R53HR55NH57RD33G with Lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2018-06-26
Authors: Su, J.
PDB entry 6a65: Placental protein 13/galectin-13 variant R53HR55N with Tris
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.771 Å
Deposited: 2018-06-26
Authors: Su, J.
PDB entry 6a66: Placental protein 13/galectin-13 variant R53H with Tris
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2018-06-26
Authors: Su, J.Y.
PDB entry 6a67: Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody FLD21.140
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Thailand/1(KAN-1)/2004(H5N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2018-06-26
Authors: Wang, P., Zuo, Y., Sun, J., Zhang, L., Wang, X.
PDB entry 6a68: the crystal structure of rat calcium-dependent activator protein for secretion (CAPS) DAMH domain
Classification: EXOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.901 Å
Deposited: 2018-06-26
Authors: Zhou, H., Wei, Z.Q., Yao, D.Q., Zhang, R.G., Ma, C.
PDB entry 6a69: Cryo-EM structure of a P-type ATPase
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.11 Å
Deposited: 2018-06-27
Authors: Gong, D.S., Chi, X.M., Ren, K., Huang, G.X.Y., Zhou, G.W., Yan, N., Lei, J.L., Zhou, Q.
PDB entry 6a6a: VanYB in complex with D-Alanine
Classification: HYDROLASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2018-06-27
Authors: Kim, H.S., Hahn, H.
PDB entry 6a6b: cryo-em structure of alpha-synuclein fiber
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2018-06-27
Authors: Li, Y.W., Zhao, C.Y., Luo, F., Liu, Z., Gui, X., Luo, Z., Zhang, X., Li, D., Liu, C., Li, X.
PDB entry 6a6c: Crystal structure of carbohydrate-binding module family 56 beta-1,3-glucan binding domain
Classification: SUGAR BINDING PROTEIN
Source organism: Paenibacillus barengoltzii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-06-27
Authors: Qin, Z., Lin, S.
PDB entry 6a6d: Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Dephospho Coenzyme A at 2.90A resolution
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii (strain ACICU)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-06-27
Authors: Singh, P.K., Gupta, A., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 6a6e: Crystal structure of thermostable Cysteine desulfurase (FiSufS) from thermophilic Fervidobacterium Islandicum AW-1
Classification: TRANSFERASE
Source organism: Fervidobacterium islandicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2018-06-27
Authors: Dhanasingh, I., Jin, H.S., Lee, D.W., Lee, S.H.
PDB entry 6a6f: Crystal structure of Putative iron-sulfur cluster assembly scaffold protein for SUF system (FiSufU) from thermophilic Fervidobacterium Islandicum AW-1
Classification: BIOSYNTHETIC PROTEIN
Source organism: Fervidobacterium islandicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-06-27
Authors: Dhanasingh, I., Jin, H.S., Lee, D.W., Lee, S.H.
PDB entry 6a6g: Crystal structure of thermostable FiSufS-SufU complex from thermophilic Fervidobacterium Islandicum AW-1
Classification: TRANSFERASE
Source organism: Fervidobacterium islandicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2018-06-27
Authors: Dhanasingh, I., Jin, H.S., Lee, D.W., Lee, S.H.
PDB entry 6a6h: Crystal Structure of Swine Major Histocompatibility Complex Class I SLA-2*040202 For 2.3 Angstrom
Classification: IMMUNE SYSTEM
Source organism: Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2018-06-28
Authors: Ning, S., Wang, Z.B.
PDB entry 6a6i: Crystal structure of the winged-helix domain of Cockayne syndrome group B protein in complex with ubiquitin
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-06-28
Authors: Takahashi, T.S., Sato, Y., Fukai, S.
PDB entry 6a6j: Crystal structure of Zebra fish Y-box protein1 (YB-1) Cold-shock domain in complex with 6mer m5C RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.255 Å
Deposited: 2018-06-28
Authors: Zhang, M.M., Wu, B.X., Huang, Y., Ma, J.B.
PDB entry 6a6k: Crystal structure of Estrogen-related Receptor-3 (ERR-gamma) ligand binding domain with DN201000
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-06-28
Authors: Yoon, H., Kim, J., Chin, J., Cho, S.J., Song, J.
PDB entry 6a6l: Crystal structure of the cold shock domain of YB-1 in complex with m5C RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2018-06-28
Authors: Huang, Y.
PDB entry 6a6m: Crystal structure of an outward-open nucleotide-bound state of the eukaryotic ABC multidrug transporter CmABCB1
Classification: TRANSPORT PROTEIN
Source organism: Cyanidioschyzon merolae strain 10D
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-06-28
Authors: Kato, H., Nakatsu, T., Kodan, A.
PDB entry 6a6n: Crystal structure of an inward-open apo state of the eukaryotic ABC multidrug transporter CmABCB1
Classification: TRANSPORT PROTEIN
Source organism: Cyanidioschyzon merolae strain 10D
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2018-06-28
Authors: Kato, H., Nakatsu, T., Kodan, A.
PDB entry 6a6o: Crystal structure of acetyl ester-xyloside bifunctional hydrolase from Caldicellulosiruptor lactoaceticus
Classification: HYDROLASE
Source organism: Caldicellulosiruptor lactoaceticus 6A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-06-28
Authors: Cao, H., Huang, Y., Sun, L.C., Liu, X., Liu, T.F., Wang, F.Z., Xin, F.J.
PDB entry 6a6p: Crystal Structure of Peroxisome Proliferator-Activated Receptor Delta (PPARd)LBD in Complex with DN003316
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-06-29
Authors: Chin, J.W., Cho, S.J., Song, J.Y., Ha, J.H.
PDB entry 6a6q: Crystal structure of a lignin peroxidase isozyme H8 variant that is stable at very acidic pH
Classification: OXIDOREDUCTASE
Source organism: Phanerochaete chrysosporium RP-78
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2018-06-29
Authors: Seo, H., Kim, K.-J., Pham, L.T.M.
PDB entry 6a6r: Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans, Seleno-methionine Derivative
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.609 Å
Deposited: 2018-06-29
Authors: Ogawa, N., Maruyama, Y., Itoh, T., Hashimoto, W., Murata, K.
PDB entry 6a6s: Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans in complex with FSA, Seleno-methionine Derivative
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.851 Å
Deposited: 2018-06-29
Authors: Ogawa, N., Maruyama, Y., Itoh, T., Hashimoto, W., Murata, K.
PDB entry 6a6t: Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans with R61G mutation
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2018-06-29
Authors: Ogawa, N., Maruyama, Y., Itoh, T., Hashimoto, W., Murata, K.
PDB entry 6a6u: Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans with R61G mutation, in complex with FSA
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.945 Å
Deposited: 2018-06-29
Authors: Ogawa, N., Maruyama, Y., Itoh, T., Hashimoto, W., Murata, K.
PDB entry 6a6v: Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans with 7 additional mutations, in complex with FSA
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-06-29
Authors: Ogawa, N., Maruyama, Y., Itoh, T., Hashimoto, W., Murata, K.
PDB entry 6a6w: Crystal structure of fission yeast inner membrane protein Bqt4 in complex with Sad1
Classification: MEMBRANE PROTEIN
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2018-06-29
Authors: Chen, Y., Hu, C.
PDB entry 6a6x: The crystal structure of the Mtb MazE-MazF-mt9 complex
Classification: TOXIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-06-29
Authors: Xie, W., Chen, R., Tu, J.
PDB entry 6a6y: Crystal Structure of Asf1 from Plasmodium falciparum
Classification: CHAPERONE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.491 Å
Deposited: 2018-06-29
Authors: Srivastava, D.K., Roy, S.
PDB entry 6a70: Structure of the human PKD1/PKD2 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2018-06-29
Authors: Su, Q., Hu, F., Ge, X., Lei, J., Yu, S., Wang, T., Zhou, Q., Mei, C., Shi, Y.
PDB entry 6a71: Crystal Structure of Human ATP7B and TM Complex
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-06-30
Authors: Chen, W.B.
PDB entry 6a72: Copper transporter protein
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-07-01
Authors: Chen, W.B.
PDB entry 6a73: Complex structure of CSN2 with IP6
Classification: SIGNALING PROTEIN
Source organism: Enterobacteria phage RB59; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.447 Å
Deposited: 2018-07-02
Authors: Liu, L., Li, D., Rao, F., Wang, T.
PDB entry 6a75: Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Dephospho Coenzyme A at 2.75 A resolution
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii (strain ACICU)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2018-07-02
Authors: Singh, P.K., Gupta, A., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 6a76: Crystal structure of the Fab fragment of B5209B, a murine monoclonal antibody specific for the fifth immunoglobulin domain (Ig5) of human ROBO1
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-07-02
Authors: Mizohata, E., Nakayama, T., Kado, Y., Inoue, T.
PDB entry 6a77: Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the Fab fragment of murine monoclonal antibody B5209B
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-07-02
Authors: Mizohata, E., Nakayama, T., Kado, Y., Inoue, T.
PDB entry 6a78: Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the scFv fragment of murine monoclonal antibody B5209B
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-07-02
Authors: Mizohata, E., Nakayama, T., Kado, Y., Inoue, T.
PDB entry 6a79: Crystal structure of the fifth immunoglobulin domain (Ig5) of human Robo1 in complex with the mutant scFv fragment (P103A) of murine monoclonal antibody B5209B
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2018-07-02
Authors: Mizohata, E., Nakayama, T., Kado, Y., Yokota, Y., Inoue, T.
PDB entry 6a7a: AKR1C1 complexed with new inhibitor with novel scaffold
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2018-07-02
Authors: Zheng, X., Zhao, Y., Zhang, H., Chen, Y.
PDB entry 6a7b: AKR1C3 complexed with new inhibitor with novel scaffold
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2018-07-02
Authors: Zheng, X., Zhao, Y., Zhang, H., Chen, Y.
PDB entry 6a7c: Human dihydrofolate reductase complexed with NADPH and BT1
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2018-07-02
Authors: Vanichtanankul, J., Tarnchompoo, B., Chitnumsub, P., Kamchonwongpaisan, S., Yuthavong, Y.
PDB entry 6a7d: Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Dephospho Coenzyme A at 2.74 A resolution
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii (strain ACICU)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2018-07-02
Authors: Singh, P.K., Gupta, A., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 6a7e: Human dihydrofolate reductase complexed with NADPH and BT2
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-07-02
Authors: Vanichtanankul, J., Tarnchompoo, B., Chitnumsub, P., Kamchonwongpaisan, S., Yuthavong, Y.
PDB entry 6a7f: The cryo-EM structure of filamentous bacteriophage IKe major coat protein p8 shell assembly.
Classification: VIRAL PROTEIN
Source organism: Filamentous phage
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2018-07-03
Authors: Xu, J.W., Dayan, N., Goldbourt, A., Xiang, Y.
PDB entry 6a7h: Bacterial protein toxins
Classification: TOXIN
Source organism: Vibrio vulnificus CMCP6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2018-07-03
Authors: Kim, M.H., Hwang, J., Jang, S.Y.
PDB entry 6a7i: CYP154C4 from Streptomyces sp. W2061
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. JS01
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2018-07-03
Authors: Lee, C.W., Lee, J.H.
PDB entry 6a7j: Testerone bound CYP154C4 from Streptomyces sp. ATCC 11861
Classification: OXIDOREDUCTASE
Source organism: Streptomyces violaceoruber
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2018-07-03
Authors: Lee, C.W., Lee, J.H.
PDB entry 6a7k: X-ray structure of NdhS from T. elongatus
Classification: ELECTRON TRANSPORT
Source organism: Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-07-03
Authors: Umeno, K., Misumi, Y., Tanaka, H., Kurisu, G.
PDB entry 6a7p: Human serum albumin complexed with aripiprazole
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2018-07-03
Authors: Kawai, A., Yamasaki, K., Otagiri, M.
PDB entry 6a7s: Ca2+-independent C-type lectin SPL-2 from Saxidomus purpuratus
Classification: SUGAR BINDING PROTEIN
Source organism: Saxidomus purpuratus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-07-04
Authors: Unno, H., Hatakeyama, T.
PDB entry 6a7t: Ca2+-independent C-type lectin SPL-1 from Saxidomus purpuratus
Classification: SUGAR BINDING PROTEIN
Source organism: Saxidomus purpuratus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-07-04
Authors: Unno, H., Hatakeyama, T.
PDB entry 6a7u: Crystal structure of histone H2A.Bbd-H2B dimer
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-07-04
Authors: Dai, L., Zhou, Z.
PDB entry 6a7v: Crystal structure of Mycobacterium tuberculosis VapBC11 toxin-antitoxin complex
Classification: TOXIN/ANTITOXIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2018-07-04
Authors: Deep, A., Thakur, K.G.
PDB entry 6a7w: Structure of a catalytic domain of the colistin resistance enzyme
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.988 Å
Deposited: 2018-07-04
Authors: Wang, X.D., Chai, Y., Qi, J.X., Gao, G.F.
PDB entry 6a7x: Rat Xanthine oxidoreductase, D428A variant, NAD bound form
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-07-05
Authors: Okamoto, K., Kawaguchi, Y.
PDB entry 6a7y: Solution structure of an intermolecular leaped V-shape G-quadruplex
Classification: DNA
Source organism: Sterkiella nova
Experimental method: SOLUTION NMR
Deposited: 2018-07-05
Authors: Wan, C.J., Zhang, N.
PDB entry 6a80: Crystal Structure of putative amino acid binding periplasmic ABC transporter protein from Candidatus Liberibacter asiaticus in complex with cystine
Classification: TRANSPORT PROTEIN
Source organism: Liberibacter asiaticus (strain psy62)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2018-07-05
Authors: Kumar, P., Kesari, P., Ghosh, D.K., Kumar, P., Sharma, A.K.
PDB entry 6a82: Crystal structure of the C-terminal periplasmic domain of EcEptC from Escherichia coli
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-07-06
Authors: Zhao, Y.Q., Gu, Y.J., Cheng, W.
PDB entry 6a83: Crystal structure of the C-terminal periplasmic domain of EcEptC from Escherichia coli complex with Zn
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.602 Å
Deposited: 2018-07-06
Authors: Zhao, Y.Q., Gu, Y.J., Cheng, W.
PDB entry 6a84: Tankyrase-2 in complex with compound 15d
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2018-07-06
Authors: Niwa, H., Shirai, F., Sato, S., Yoshimoto, N., Tsumura, T., Okue, M., Shirouzu, M., Seimiya, H., Umehara, T.
PDB entry 6a85: Crystal structure of a novel DNA quadruplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2018-07-06
Authors: Liu, H.H., Gan, J.H.
PDB entry 6a86: Pholiota squarrosa lectin
Classification: SUGAR BINDING PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-07-06
Authors: Yamasaki, K., Yamasaki, T., Kubota, T.
PDB entry 6a87: Pholiota squarrosa lectin (PhoSL) in complex with fucose(alpha1-6)GlcNAc
Classification: SUGAR BINDING PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2018-07-06
Authors: Yamasaki, K., Yamasaki, T., Kubota, T.
PDB entry 6a88: Crystal Structure of T. gondii prolyl tRNA synthetase with Febrifugine and ATP Analog
Classification: TRANSLATION
Source organism: Toxoplasma gondii ME49
Experimental method: X-RAY DIFFRACTION
Resolution: 2.596 Å
Deposited: 2018-07-06
Authors: Kumari, S., Mishra, S., Yogavel, M., Sharma, A.
PDB entry 6a89: Crystal structure of the ternary complex of peptidoglycan recognition protein (PGRP-S) with Tartaric acid, Ribose and 2,6-DIAMINOPIMELIC ACID at 2.11 A resolution
Classification: IMMUNE SYSTEM
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2018-07-06
Authors: Bairagya, H.R., Shokeen, A., Sharma, P., Singh, P.K., Sharma, S., Singh, T.P.
PDB entry 6a8a: Ribokinase from Leishmania donovani with ATP
Classification: TRANSFERASE
Source organism: Leishmania donovani BPK282A1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-07-06
Authors: Gatreddi, S., Qureshi, I.A.
PDB entry 6a8b: Ribokinase from Leishmania donovani with AMPPCP
Classification: TRANSFERASE
Source organism: Leishmania donovani
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2018-07-06
Authors: Gatreddi, S., Pillalamarri, V., Qureshi, I.A.
PDB entry 6a8c: Ribokinase from Leishmania donovani with ADP
Classification: TRANSFERASE
Source organism: Leishmania donovani BPK282A1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2018-07-06
Authors: Gatreddi, S., Vasudevan, D., Qureshi, I.A.
PDB entry 6a8d: Crystal Structure of Chlamydomonas reinhardtii ARF
Classification: PROTEIN TRANSPORT
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2018-07-06
Authors: Kumari, S., Goel, M., Kateriya, S., Sharma, P.
PDB entry 6a8g: The crystal structure of muPAin-1-IG in complex with muPA-SPD at pH8.5
Classification: HYDROLASE INHIBITOR/HYDROLASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2018-07-08
Authors: Wang, D., Yang, Y.S., Jiang, L.G., Huang, M.D., Li, J.Y., Andreasen, P.A., Xu, P., Chen, Z.
PDB entry 6a8h: Crystal structure of endo-arabinanase ABN-TS D27A mutant in complex with arabinotriose
Classification: HYDROLASE
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2018-07-09
Authors: Yamaguchi, A., Tada, T.
PDB entry 6a8i: Crystal structure of endo-arabinanase ABN-TS D147N mutant in complex with arabinohexaose
Classification: HYDROLASE
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-07-09
Authors: Yamaguchi, A., Tada, T.
PDB entry 6a8j: Crystal structure of bacterial protein toxins
Classification: TOXIN
Source organism: Vibrio vulnificus CMCP6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.711 Å
Deposited: 2018-07-09
Authors: Kim, M.H., Hwang, J., Jang, S.Y.
PDB entry 6a8k: Crystal structure of Ice-binding Protein from a Sea-Ice Microalga
Classification: ANTIFREEZE PROTEIN
Source organism: Fragilariopsis cylindrus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2018-07-09
Authors: Kondo, H., Bayer-Giraldi, M.
PDB entry 6a8l: Crystal structure of nicotinamidase/ pyrazinamidase PncA from Bacillus subtilis
Classification: METAL BINDING PROTEIN
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-07-09
Authors: Shang, F., Chen, J., Wang, L., Xu, Y.
PDB entry 6a8m: N-terminal domain of FACT complex subunit SPT16 from Eremothecium gossypii (Ashbya gossypii)
Classification: DNA BINDING PROTEIN
Source organism: Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-07-09
Authors: Gaur, N.K., Are, V.N., Durani, V., Ghosh, B., Kumar, A., Kulkarni, K., Makde, R.D.
PDB entry 6a8n: The crystal structure of muPAin-1-IG-2 in complex with muPA-SPD at pH8.5
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.489 Å
Deposited: 2018-07-09
Authors: Wang, D., Yang, Y.S., Jiang, L.G., Huang, M.D., Li, J.Y., Andreasen, P.A., Xu, P., Chen, Z.
PDB entry 6a8o: Crystal structures of the serine protease domain of murine plasma kallikrein with peptide inhibitor mupain-1-16
Classification: HYDROLASE
Source organism: Mus musculus; Synthemiopsis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2018-07-09
Authors: Xu, M., Jiang, L., Huang, M.
PDB entry 6a8p: Transglutaminase 2 mutant G224V in complex with GTP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.537 Å
Deposited: 2018-07-09
Authors: Park, H.H., Ha, H.J., Kwon, S.
PDB entry 6a8q: R207A mutant of highly active EfBSH
Classification: HYDROLASE
Source organism: Enterococcus faecalis T2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-07-10
Authors: Ramasamy, S., Yadav, Y.
PDB entry 6a8r: Crystal structure of DUX4 HD2 domain associated with ERG DNA binding site
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-07-10
Authors: Dong, X., Zhang, H., Cheng, N., Meng, G.
PDB entry 6a8s: Crystal Structure of the putative amino acid-binding periplasmic ABC transporter protein from Candidatus Liberibacter asiaticus in complex with Cysteine
Classification: TRANSPORT PROTEIN
Source organism: Liberibacter asiaticus (strain psy62)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-07-10
Authors: Kumar, P., Kesari, P., Ghosh, D.K., Kumar, P., Sharma, A.K.
PDB entry 6a8t: E269A mutant of highly active EfBSH
Classification: HYDROLASE
Source organism: Enterococcus faecalis T2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-07-10
Authors: Ramasamy, S., Yadav, Y.
PDB entry 6a8u: PhoQ sensor domain (wild type): analysis of internal cavity
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.848 Å
Deposited: 2018-07-10
Authors: Yoshitani, K., Ishii, E., Taniguchi, K., Sugimoto, H., Shiro, Y., Mori, H., Akiyama, Y., Kato, A., Utsumi, R., Eguchi, Y.
PDB entry 6a8v: PhoQ sensor domain (D179R mutant): analysis of internal cavity
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-07-10
Authors: Yoshitani, K., Ishii, E., Taniguchi, K., Sugimoto, H., Shiro, Y., Mori, H., Akiyama, Y., Kato, A., Utsumi, R., Eguchi, Y.
PDB entry 6a8w: Crystal structure of the FHA domain of Far9
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.844 Å
Deposited: 2018-07-10
Authors: Chen, M., Zhang, W.Q., Zhou, Z.C.
PDB entry 6a8x: Crystal structure of a apo form cyclase from Fischerella sp.
Classification: TRANSPORT PROTEIN
Source organism: Fischerella ambigua
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2018-07-11
Authors: Hu, X.Y., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 6a8y: YR26_SDS
Classification: ANTIMICROBIAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2018-07-11
Authors: Sinha, S., Bhattacharjya, S.
PDB entry 6a8z: Crystal structure of M1 zinc metallopeptidase from Deinococcus radiodurans
Classification: HYDROLASE
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.045 Å
Deposited: 2018-07-11
Authors: Agrawal, R., Kumar, A., Makde, R.D.
PDB entry 6a90: Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana and Dc1a
Classification: MEMBRANE PROTEIN/TOXIN
Source organism: Diguetia canities; Periplaneta americana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2018-07-11
Authors: Shen, H.Z., li, Z.Q., Jiang, Y., Pan, X.J., Wu, J.P., Cristofori-Armstrong, B., Smith, J.J., Chin, Y.K.Y., Lei, J.L., Zhou, Q., King, G.F., Yan, N.
PDB entry 6a91: Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with saxitoxin and Dc1a
Classification: MEMBRANE PROTEIN/TOXIN
Source organism: Diguetia canities; Periplaneta americana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2018-07-11
Authors: Shen, H.Z., li, Z.Q., Jiang, Y., Pan, X.J., Wu, J.P., Cristofori-Armstrong, B., Smith, J.J., Chin, Y.K.Y., Lei, J.L., Zhou, Q., King, G.F., Yan, N.
PDB entry 6a92: Crystal structure of a cyclase Filc1 from Fischerella sp.
Classification: TRANSFERASE
Source organism: Fischerella
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2018-07-11
Authors: Hu, X.Y., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 6a93: Crystal structure of 5-HT2AR in complex with risperidone
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2018-07-11
Authors: Kimura, T.K., Asada, H., Inoue, A., Kadji, F.M.N., Im, D., Mori, C., Arakawa, T., Hirata, K., Nomura, Y., Nomura, N., Aoki, J., Iwata, S., Shimamura, T.
PDB entry 6a94: Crystal structure of 5-HT2AR in complex with zotepine
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-07-11
Authors: Kimura, T.K., Asada, H., Inoue, A., Kadji, F.M.N., Im, D., Mori, C., Arakawa, T., Hirata, K., Nomura, Y., Nomura, N., Aoki, J., Iwata, S., Shimamura, T.
PDB entry 6a95: Complex of voltage-gated sodium channel NavPaS from American cockroach Periplaneta americana bound with tetrodotoxin and Dc1a
Classification: MEMBRANE PROTEIN/TOXIN
Source organism: Diguetia canities; Periplaneta americana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2018-07-11
Authors: Shen, H.Z., li, Z.Q., Jiang, Y., Pan, X.J., Wu, J.P., Cristofori-Armstrong, B., Smith, J.J., Chin, Y.K.Y., Lei, J.L., Zhou, Q., King, G.F., Yan, N.
PDB entry 6a96: Cryo-EM structure of the human alpha5beta3 GABAA receptor in complex with GABA and Nb25
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2018-07-11
Authors: Liu, S., Xu, L., Guan, F., Liu, Y.T., Cui, Y., Zhang, Q., Bi, G.Q., Zhou, Z.H., Zhang, X., Ye, S.
PDB entry 6a97: Crystal structure of MHC-like MILL2
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.148 Å
Deposited: 2018-07-11
Authors: Kajikawa, M., Ose, T., Maenaka, K.
PDB entry 6a98: Crystal structure of a cyclase from Fischerella sp. TAU
Classification: TRANSFERASE
Source organism: Fischerella ambigua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2018-07-12
Authors: Hu, X.Y., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 6a99: Crystal structure of a Stig cyclases Fisc from Fischerella sp. TAU in complex with (3Z)-3-(1-methyl-2-pyrrolidinylidene)-3H-indole
Classification: TRANSFERASE
Source organism: Fischerella sp. UTEX 'LB 1931'
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2018-07-12
Authors: Hu, X.Y., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 6a9a: Ternary complex crystal structure of dCH with dCMP and THF
Classification: TRANSFERASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-07-12
Authors: Park, S.H., Song, H.K.
PDB entry 6a9b: T4 dCMP hydroxymethylase structure solved by I-SAD using a home source
Classification: TRANSFERASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2018-07-12
Authors: Park, S.H., Song, H.K.
PDB entry 6a9c: Crystal Structure c-terminal SH3 domain of Myosin IB from Entamoeba histolytica bound to EhFP10(GEF) peptide.
Classification: CONTRACTILE PROTEIN
Source organism: Entamoeba histolytica; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2018-07-13
Authors: Gautam, G., Gourinath, S.
PDB entry 6a9d: Crystal structure of the strigolactone receptor ShHTL7 from Striga hermonthica
Classification: PLANT PROTEIN
Source organism: Striga hermonthica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.302 Å
Deposited: 2018-07-13
Authors: Zhang, Y.Y., Xi, Z., Wang, D.W.
PDB entry 6a9e: Crystal structure of the N-terminal domain of Atg2
Classification: LIPID TRANSPORT
Source organism: Enterobacteria phage RB59; Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.205 Å
Deposited: 2018-07-13
Authors: Osawa, T., Noda, N.N.
PDB entry 6a9f: Crystal structure of a cyclase from Fischerella sp. TAU in complex with 4-(1H-Indol-3-yl)butan-2-one
Classification: TRANSFERASE
Source organism: Mastigocladus laminosus UTEX LB 1931
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-07-13
Authors: Hu, X.Y., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 6a9j: Crystal structure of the PE-bound N-terminal domain of Atg2
Classification: LIPID TRANSPORT
Source organism: Enterobacteria phage RB59; Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-07-13
Authors: Osawa, T., Noda, N.N.
PDB entry 6a9k: Crystal structure of the complex of the hydrolytic antibody Fab 9C10 with a transition-state analog
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-07-13
Authors: Tsuchiya, Y., Fujii, I., Tada, T., Yamaguchi, A., Tsumuraya, T., Kumon, A.
PDB entry 6a9n: Crystal structure of KAS III from Propionibacterium acnes
Classification: TRANSFERASE
Source organism: Cutibacterium acnes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.099 Å
Deposited: 2018-07-14
Authors: Lee, W.C., Cheon, D., Kim, Y.
PDB entry 6a9o: Rational discovery of a SOD1 tryptophan oxidation inhibitor with therapeutic potential for amyotrophic lateral sclerosis
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-07-14
Authors: Manjula, R., Padmanabhan, B.
PDB entry 6a9p: Crystal structure of the human glial fibrillary acidic protein 1B domain
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2018-07-14
Authors: Jin, M.S., Kim, B., Kim, S.
PDB entry 6a9s: The crystal structure of vaccinia virus A26 (residues 1-397)
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus (strain Western Reserve)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2018-07-16
Authors: Wang, H.C., Ko, T.Z., Luo, Y.C., Liao, Y.T., Chang, W.
PDB entry 6a9t: Crystal structure of Icp55 from Saccharomyces cerevisiae (N-terminal 58 residues deletion)
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-07-16
Authors: Singh, R., Kumar, A., Goyal, V.D., Makde, R.D.
PDB entry 6a9u: Crystal strcture of Icp55 from Saccharomyces cerevisiae bound to apstatin inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Saccharomyces cerevisiae S288c; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-07-16
Authors: Singh, R., Kumar, A., Goyal, V.D., Makde, R.D.
PDB entry 6a9v: Crystal structure of Icp55 from Saccharomyces cerevisiae (N-terminal 42 residues deletion)
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-07-16
Authors: Singh, R., Kumar, A., Goyal, V.D., Makde, R.D.
PDB entry 6a9w: Structure of the bifunctional DNA primase-polymerase from phage NrS-1
Classification: REPLICATION
Source organism: Nitratiruptor phage NrS-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-07-16
Authors: Guo, H.J., Li, M.J., Wang, T.L., Wu, H., Zhou, H., Xu, C.Y., Liu, X.P., Yu, F., He, J.H.
PDB entry 6a9x: Crystal Structure of AnkG/GABARAP Complex
Classification: PROTEIN BINDING
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.202 Å
Deposited: 2018-07-16
Authors: Wang, C., Li, J., Chen, K., Zhang, M.
PDB entry 6a9y: The crystal structure of Mu homology domain of SGIP1
Classification: ENDOCYTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-07-16
Authors: Feng, Y., Liu, X.
PDB entry 6aa0: Crystal Structure of Toxoplasma gondii Prolyl tRNA Synthetase (TgPRS) in Apo Form
Classification: TRANSLATION
Source organism: Toxoplasma gondii ME49
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-07-16
Authors: Mishra, S., Kumari, S., Sharma, A., Yogavel, M.
PDB entry 6aa1: Crystal structure of putative amino acid binding periplasmic ABC transporter protein from Candidatus Liberibacter asiaticus bound with citrate
Classification: TRANSPORT PROTEIN
Source organism: Liberibacter asiaticus (strain psy62)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2018-07-16
Authors: Kumar, P., Kesari, P., Ghosh, D.K., Kumar, P., Sharma, A.K.
PDB entry 6aa2: X-ray structure of ReQy1 (oxidized form)
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-07-17
Authors: Sugiura, K., Yasuda, A., Tabushi, N., Tanaka, H., Kurisu, G., Hisabori, T.
PDB entry 6aa3: Crystal structure of MTH1 in apo form (cocktail No. 1)
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2018-07-17
Authors: Yokoyama, T., Kitakami, R., Mizuguchi, M.
PDB entry 6aa4: Crystal structure of MTH1 in complex with alpha-mangostin (cocktail No. 9)
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-07-17
Authors: Yokoyama, T., Kitakami, R., Mizuguchi, M.
PDB entry 6aa5: Crystal structure of MTH1 in complex with 3-isomangostin
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2018-07-17
Authors: Yokoyama, T., Kitakami, R., Mizuguchi, M.
PDB entry 6aa6: X-ray structure of ReQy1 (reduced form)
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2018-07-17
Authors: Kurisu, G., Yasuda, A., Tabushi, N., Tanaka, H.
PDB entry 6aa7: Fluorescent protein from Acropora digitifera
Classification: FLUORESCENT PROTEIN
Source organism: Acropora digitifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-07-17
Authors: Kim, S.E., Hwang, K.Y., Nam, K.H.
PDB entry 6aa8: Crystal structure of (S)-3-hydroxybutyryl-coenzymeA dehydrogenase from Clostridium acetobutylicum complexed with NAD+
Classification: OXIDOREDUCTASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-07-17
Authors: Takenoya, M., Taguchi, S., Yajima, S.
PDB entry 6aa9: T166A mutant of D-Serine deaminase from Salmonella typhimurium
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-07-17
Authors: Deka, G., Bharath, S.R., Shavithri, H.S., Murthy, M.R.N.
PDB entry 6aaa: Structure of a blue-shifted Luciferase from Amydetes vivianii
Classification: LUMINESCENT PROTEIN
Source organism: Amydetes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-07-18
Authors: Carrasco-Lopez, C., Naumov, P., Rabeh, W.
PDB entry 6aab: Thanatin in presence of DPC
Classification: ANTIBIOTIC
Experimental method: SOLUTION NMR
Deposited: 2018-07-18
Authors: Sinha, S., Bhattacharjya, S.
PDB entry 6aac: Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with mAzZLys
Classification: TRANSLATION
Source organism: Methanosarcina mazei JCM 9314
Experimental method: X-RAY DIFFRACTION
Resolution: 1.479 Å
Deposited: 2018-07-18
Authors: Yanagisawa, T., Kuratani, M., Yokoyama, S.
PDB entry 6aad: Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with mTmdZLys
Classification: TRANSLATION
Source organism: Methanosarcina mazei JCM 9314
Experimental method: X-RAY DIFFRACTION
Resolution: 1.444 Å
Deposited: 2018-07-18
Authors: Yanagisawa, T., Kuratani, M., Yokoyama, S.
PDB entry 6aae: Crystal structure of Chloramphenicol-Metabolizaing Enzyme EstDL136
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.641 Å
Deposited: 2018-07-18
Authors: Kim, S.H., Kang, P.A., Han, K.T., Lee, S.W., Rhee, S.K.
PDB entry 6aaf: Crystal structure of fission yeast Atg8 complexed with the helical AIM of Hfl1.
Classification: MEMBRANE PROTEIN
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.197 Å
Deposited: 2018-07-18
Authors: Yamasaki, A., Noda, N.N.
PDB entry 6aag: Crystal structure of budding yeast Atg8 complexed with the helical AIM of Hfl1.
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Saccharomyces cerevisiae (strain YJM789)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.445 Å
Deposited: 2018-07-18
Authors: Yamasaki, A., Noda, N.N.
PDB entry 6aah: Crystal structure of JAK1 in complex with peficitinib
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-07-18
Authors: Amano, Y.
PDB entry 6aaj: Crystal structure of JAK2 in complex with peficitinib
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2018-07-18
Authors: Amano, Y., Tateishi, Y.
PDB entry 6aak: Crystal structure of JAK3 in complex with peficitinib
Classification: TRANSFERASE/INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2018-07-18
Authors: Amano, Y.
PDB entry 6aal: Crystal Structure of putative amino acid binding periplasmic ABC transporter protein from Candidatus Liberibacter asiaticus in complex with Arginine
Classification: TRANSPORT PROTEIN
Source organism: Liberibacter asiaticus (strain psy62)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-07-18
Authors: Kumar, P., Kesari, P., Ghosh, D.K., Kumar, P., Sharma, A.K.
PDB entry 6aam: Crystal structure of TYK2 in complex with peficitinib
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2018-07-18
Authors: Nomura, N., Tomimoto, Y.
PDB entry 6aan: Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with mEtZLys
Classification: TRANSLATION
Source organism: Methanosarcina mazei JCM 9314
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2018-07-18
Authors: Yanagisawa, T., Kuratani, M., Yokoyama, S.
PDB entry 6aao: Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with TCO*Lys
Classification: TRANSLATION
Source organism: Methanosarcina mazei JCM 9314
Experimental method: X-RAY DIFFRACTION
Resolution: 1.403 Å
Deposited: 2018-07-18
Authors: Yanagisawa, T., Kuratani, M., Yokoyama, S.
PDB entry 6aap: Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with ZaeSeCys
Classification: TRANSLATION
Source organism: Methanosarcina mazei JCM 9314
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-07-18
Authors: Yanagisawa, T., Kuratani, M., Yokoyama, S.
PDB entry 6aaq: Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with BCNLys
Classification: TRANSLATION
Source organism: Methanosarcina mazei JCM 9314
Experimental method: X-RAY DIFFRACTION
Resolution: 1.551 Å
Deposited: 2018-07-18
Authors: Yanagisawa, T., Kuratani, M., Yokoyama, S.