LiteFold/PDB huggingface dataset:
PDB entry 5czg: Crystal Structure Analysis of hypothetical bromodomain Tb427.10.7420 from Trypanosoma brucei in complex with bromosporine
Classification: GENE REGULATION
Source organism: Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.451 Å
Deposited: 2015-07-31
Authors: Jiang, D.Q., Tempel, W., Loppnau, P., Graslund, S., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Hui, R., Amani, M., Hou, C.F.D., Structural Genomics Consortium (SGC)
PDB entry 5czh: EGFR L858R MUTANT IN COMPLEX WITH AN OPTIMAL PEPTIDE SUBSTRATE
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-07-31
Authors: Yun, C.H., Eck, M.J.
PDB entry 5czi: EGFR L858R MUTANT IN COMPLEX WITH A SHC PEPTIDE SUBSTRATE
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-07-31
Authors: Yun, C.H., Eck, M.J.
PDB entry 5czj: Crystal structure of HypD, a 1-pyrroline-4-hydroxy-2-carboxylate deaminase from Sinorhizobium meliloti
Classification: HYDROLASE
Source organism: Rhizobium meliloti (strain 1021)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2015-07-31
Authors: Stogios, P.J., Xu, X., Savchenko, A.
PDB entry 5czk: Structure of E. coli beta-glucuronidase bound with a novel, potent inhibitor 1-((6,8-dimethyl-2-oxo-1,2-dihydroquinolin-3-yl)methyl)-1-(2-hydroxyethyl)-3-(4-hydroxyphenyl)thiourea
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2015-07-31
Authors: Roberts, A.R., Wallace, B.R., Redinbo, M.R.
PDB entry 5czl: Crystal structure of a novel GH8 endo-beta-1,4-glucanase from an Achatina fulica gut metagenomic library
Classification: HYDROLASE
Source organism: Raoultella ornithinolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.391 Å
Deposited: 2015-07-31
Authors: Scapin, S.M.N., Souza, F.H.M., Zanphorlin, L.M., Almeida, T.S., Sade, Y.B., Cardoso, A.M., Pinheiro, G.L., Murakami, M.T.
PDB entry 5czm: Crystal structure of a mutated catalytic domain of Human MMP12 in complex with RXP470
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.303 Å
Deposited: 2015-07-31
Authors: Rouanet-Mehouas, C., Roselia, L., Devel, L., Dive, V., Stura, E.A.
PDB entry 5czn: 2009 H1N1 PA endonuclease mutant E119D
Classification: HYDROLASE
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2015-07-31
Authors: Kumar, G., White, S.W.
PDB entry 5czo: Structure of S. cerevisiae Hrr25:Mam1 complex, form 2
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.894 Å
Deposited: 2015-07-31
Authors: Ye, Q., Corbett, K.D.
PDB entry 5czp: 70S termination complex containing E. coli RF2
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12); Escherichia coli str. K-12 substr. MG1655; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29996 Å
Deposited: 2015-07-31
Authors: Hoffer, E.D., Dunham, C.M.
PDB entry 5czr: Crystal Structure of Human Protocadherin-24 EC1-2
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-08-01
Authors: Johnson, Z.R., Sotomayor, M.
PDB entry 5czs: Neisseria meningitidis 3 dexy-D-arabino-heptulosonate 7-phosphate synthase Glu98Ala variant regulated
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2015-08-01
Authors: Heyes, L.C., Parker, E.J.
PDB entry 5czt: Neisseria meningitidis 3 dexy-D-arabino-heptulosonate 7-phosphate synthase Glu176Ala variant
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2015-08-01
Authors: Heyes, L.C., Parker, E.J.
PDB entry 5czu: Crystal structure of FeCat-Fn
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-08-01
Authors: Abe, S., Nakajima, H., Kondo, M., Nakane, T., Nakao, T., Ueno, T., Watanabe, Y.
PDB entry 5czv: Crystal structure of Notch3 NRR in complex with 20350 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2015-08-01
Authors: Hu, T., Fryer, C., Chopra, R., Clark, K.
PDB entry 5czw: Crystal structure of myroilysin
Classification: HYDROLASE
Source organism: Myroides profundi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-08-01
Authors: Zhou, J., Ran, T., Xu, D., Wang, W.
PDB entry 5czx: Crystal structure of Notch3 NRR in complex with 20358 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-08-01
Authors: Hu, T., Fryer, C., Chopra, R., Clark, K.
PDB entry 5czy: Crystal structure of LegAS4
Classification: TRANSFERASE
Source organism: Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-08-01
Authors: Son, J., Hwang, K.Y., Lee, W.C.
PDB entry 5czz: Crystal structure of Staphylococcus aureus Cas9 in complex with sgRNA and target DNA (TTGAAT PAM)
Classification: HYDROLASE/RNA/DNA
Source organism: Staphylococcus aureus subsp. aureus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-08-01
Authors: Nishimasu, H., Ishitani, R., Nureki, O.
PDB entry 5d00: Crystal structure of BshA from B. subtilis complexed with N-acetylglucosaminyl-malate and UMP
Classification: TRANSFERASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-08-01
Authors: Cook, P.D., Winchell, K.R.
PDB entry 5d01: Crystal structure of BshA from B. subtilis complexed with N-acetylglucosaminyl-malate
Classification: TRANSFERASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2015-08-02
Authors: Cook, P.D., Winchell, K.R.
PDB entry 5d02: Neisseria meningitidis 3 deoxy-D-arabino-heptulosonate 7-phosphate synthase Glu176Gln variant
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2015-08-02
Authors: Heyes, L.C.
PDB entry 5d03: Neisseria meningitidis 3 deoxy-D-arabino-heptulosonate 7-phosphate synthase Val223Ala variant
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2015-08-02
Authors: Heyes, L.C., Parker, E.J.
PDB entry 5d04: Neisseria meningitidis 3 deoxy-D-arabino-heptulosonate 7-phosphate synthase Val223Ala variant regulated
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-02
Authors: Heyes, L.C., Parker, E.J.
PDB entry 5d05: Neisseria meningitidis 3 deoxy-D-arabino-heptulosonate 7-phosphate synthase Lys107Ala variant regulated
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2015-08-02
Authors: Heyes, L.C., Parker, E.J.
PDB entry 5d06: Crystal Structure of the Candida Glabrata Glycogen Debranching Enzyme
Classification: SUGAR BINDING PROTEIN
Source organism: Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2015-08-02
Authors: Zhai, L., Xiang, S.
PDB entry 5d08: Crystal structure of selenomethionine-labeled epoxyqueuosine reductase
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.747 Å
Deposited: 2015-08-02
Authors: Dowling, D.P., Miles, Z.D., Kohrer, C., Bandarian, V., Drennan, C.L.
PDB entry 5d09: Neisseria meningitidis 3 deoxy-D-arabino-heptulosonate 7-phosphate synthase Phe211Ala variant
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2015-08-02
Authors: Heyes, L.C., Parker, E.J.
PDB entry 5d0a: Crystal structure of epoxyqueuosine reductase with cleaved RNA stem loop
Classification: oxidoreductase/RNA
Source organism: Bacillus subtilis (strain 168); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-08-03
Authors: Dowling, D.P., Miles, Z.D., Kohrer, C., Bandarian, V., Drennan, C.L.
PDB entry 5d0b: Crystal structure of epoxyqueuosine reductase with a tRNA-TYR epoxyqueuosine-modified tRNA stem loop
Classification: oxidoreductase/RNA
Source organism: Bacillus subtilis (strain 168); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.645 Å
Deposited: 2015-08-03
Authors: Dowling, D.P., Miles, Z.D., Kohrer, C., Bandarian, V., Drennan, C.L.
PDB entry 5d0c: Crystal Structure of the first bromodomain of human BRD4 in complex with benzo[cd]indol-2(1H)-one ligand
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2015-08-03
Authors: Zhang, Y., Song, M., Liu, Z., Xue, X., Xu, Y.
PDB entry 5d0e: Crystal Structure of an adenylyl cyclase Ma1120-Cat in complex with GTP and calcium from Mycobacterium avium
Classification: LYASE
Source organism: Mycobacterium avium subsp. avium 10-9275
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2015-08-03
Authors: Bharambe, N.G., Barathy, D.V., Suguna, K.
PDB entry 5d0f: Crystal Structure of the Candida Glabrata Glycogen Debranching Enzyme (E564Q) in complex with maltopentaose
Classification: SUGAR BINDING PROTEIN
Source organism: Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2015-08-03
Authors: Zhai, L., Xiang, S.
PDB entry 5d0g: Crystal structure of triple mutant (KDA to EGY) of adenylyl cyclase Ma1120 from Mycobacterium avium in complex with GTP and calcium ion
Classification: LYASE
Source organism: Mycobacterium avium subsp. avium 10-9275
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-08-03
Authors: Bharambe, N.G., Suguna, K.
PDB entry 5d0h: Crystal Structure of triple mutant (KDA to EGY) of an adenylyl cyclase Ma1120 from Mycobacterium avium in complex with ATP and calcium ion
Classification: LYASE
Source organism: Mycobacterium avium subsp. avium 10-9275
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-08-03
Authors: Bharambe, N.G., Suguna, K.
PDB entry 5d0i: Structure of RING finger protein 165
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-08-03
Authors: Wright, J.D., Day, C.L., Mace, P.D.
PDB entry 5d0j: Grb7 SH2 with inhibitor peptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-08-03
Authors: Gunzburg, M.J., Watson, G.M., Wilce, J.A., Wilce, M.C.J.
PDB entry 5d0k: Structure of UbE2D2:RNF165:Ub complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-08-03
Authors: Wright, J.D., Day, C.L., Mace, P.D.
PDB entry 5d0m: Structure of UbE2D2:RNF165:Ub complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.913 Å
Deposited: 2015-08-03
Authors: Wright, J.D., Day, C.L., Mace, P.D.
PDB entry 5d0n: Crystal structure of maize PDRP bound with AMP
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2015-08-03
Authors: Jiang, L., Chen, Z.
PDB entry 5d0o: BamABCDE complex, outer membrane beta barrel assembly machinery entire complex
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-08-03
Authors: Gu, Y., Paterson, N., Zeng, Y., Dong, H., Wang, W., Dong, C.
PDB entry 5d0q: BamACDE complex, outer membrane beta-barrel assembly machinery (BAM) complex
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli; Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2015-08-03
Authors: Gu, Y., Paterson, N., Zeng, Y., Dong, H., Wang, W., Dong, C.
PDB entry 5d0r: Crystal structure of human soluble Adenylyl Cyclase with the inhibitor bithionol
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2015-08-03
Authors: Kleinboelting, S., Steegborn, C.
PDB entry 5d0s: Yeast 20S proteasome beta5-D166N mutant in complex with Carfilzomib
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-08-03
Authors: Huber, E.M., Groll, M.
PDB entry 5d0t: Yeast 20S proteasome beta5-D166N mutant in complex with MG132
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-08-03
Authors: Huber, E.M., Groll, M.
PDB entry 5d0u: Crystal structure of the RNA-helicase Prp43 from Chaetomium thermophilum bound to ADP
Classification: HYDROLASE
Source organism: Chaetomium thermophilum var. thermophilum DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.919 Å
Deposited: 2015-08-03
Authors: Tauchert, M.J., Ficner, R.
PDB entry 5d0v: Yeast 20S proteasome beta5-T1C mutant in complex with Carfilzomib
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-08-03
Authors: Huber, E.M., Groll, M.
PDB entry 5d0w: Yeast 20S proteasome beta5-T1S mutant
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-08-03
Authors: Huber, E.M., Groll, M.
PDB entry 5d0x: Yeast 20S proteasome beta5-T1S mutant in complex with Bortezomib
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-08-03
Authors: Huber, E.M., Groll, M.
PDB entry 5d0y: Substrate bound S-component of folate ECF transporter
Classification: TRANSPORT PROTEIN
Source organism: Lactobacillus delbrueckii subsp. bulgaricus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.014 Å
Deposited: 2015-08-03
Authors: Swier, L.J.Y.M., Guskov, A., Slotboom, D.J.
PDB entry 5d0z: Yeast 20S proteasome beta5-T1S mutant in complex with Carfilzomib
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-08-03
Authors: Huber, E.M., Groll, M.
PDB entry 5d10: Kinase domain of cSrc in complex with RL236
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-08-03
Authors: Becker, C., Mayer-Wrangowski, S.C., Julian, E., Rauh, D.
PDB entry 5d11: Kinase domain of cSrc in complex with RL235
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-08-03
Authors: Becker, C., Gruetter, C., Engel, J., Rauh, D.
PDB entry 5d12: Kinase domain of cSrc in complex with RL40
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-08-03
Authors: Becker, C., Richters, A., Engel, J., Rauh, D.
PDB entry 5d13: Third PDZ domain (PDZ3) of PSD-95 complexed with CFMOC-KKETEV peptide
Classification: signaling protein/inhibitor
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.151 Å
Deposited: 2015-08-03
Authors: De, S., Spaller, M.R., Olson, R.
PDB entry 5d14: The atomic resolution crystal structure of human IL-8
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2015-08-03
Authors: Brzezinski, K., Pompeu, Y., Lu, S., Jakoncic, J., Ostrov, D.A.
PDB entry 5d15: Crystal structure of an adenylyl cyclase Ma1120 from Mycobacterium avium in complex with ATP and calcium ion
Classification: LYASE
Source organism: Mycobacterium avium subsp. avium 10-9275
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-08-03
Authors: Bharambe, N.G., Barathy, D.V., Suguna, K.
PDB entry 5d16: Structure of the C-terminal domain of TnsE double mutant - A453V/D523N
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2015-08-03
Authors: Guarne, A., Caron, J.J.
PDB entry 5d17: Structure of the C-terminal domain of TnsE at 2.85 resolution
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2015-08-03
Authors: Guarne, A., Caron, J.J.
PDB entry 5d18: Crystal structure of Mycobacterium tuberculosis Rv0302, form I
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2015-08-04
Authors: Chou, T.-H., Delmar, J., Su, C.-C., Yu, E.
PDB entry 5d19: Crystal structure of Mycobacterium tuberculosis Rv0302, form II
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.655 Å
Deposited: 2015-08-04
Authors: Chou, T.-H., Delmar, J., Su, C.-C., Yu, E.
PDB entry 5d1b: Crystal structure of G117E HDAC8 in complex with TSA
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-08-04
Authors: Decroos, C., Christianson, N.H., Gullett, L.E., Bowman, C.M., Christianson, K.E., Deardorff, M.A., Christianson, D.W.
PDB entry 5d1c: Crystal structure of D233G-Y306F HDAC8 in complex with a tetrapeptide substrate
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.422 Å
Deposited: 2015-08-04
Authors: Decroos, C., Christianson, N.H., Gullett, L.E., Bowman, C.M., Christianson, K.E., Deardorff, M.A., Christianson, D.W.
PDB entry 5d1d: Crystal structure of P91L-Y306F HDAC8 in complex with a tetrapeptide substrate
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.011 Å
Deposited: 2015-08-04
Authors: Decroos, C., Christianson, N.H., Gullett, L.E., Bowman, C.M., Christianson, K.E., Deardorff, M.A., Christianson, D.W.
PDB entry 5d1f: Crystal structure of maize PDRP bound with AMP and Hg2+
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2015-08-04
Authors: Jiang, L., Chen, Z.
PDB entry 5d1h: Crystal structure of the 16S rRNA (adenine(1408)-N(1))-methyltransferase W203A mutant from Catenulisporales acidiphilia
Classification: TRANSFERASE
Source organism: Catenulispora acidiphila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.803 Å
Deposited: 2015-08-04
Authors: Witek, M.A., Conn, G.L.
PDB entry 5d1i: Structure of Cyclic nucleotide-binding-like protein from Brucella abortus bv. 1 str. 9-941
Classification: UNKNOWN FUNCTION
Source organism: Brucella abortus biovar 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-08-04
Authors: He, Z., Dong, J., Li, X., Gao, Y.
PDB entry 5d1j: CRYSTAL STRUCTURE OF CYCLIN-DEPENDENT KINASE 2 (CDK2-WT) COMPLEX WITH N-[5-[[[5-(1,1-DIMETHYLETHYL)-2-OXAZOLYL] METHYL]THIO]-2-THIAZOLYL]-4-PIPERIDINECARBOXAMIDE (BMS-387032)
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-08-04
Authors: Sack, J.S.
PDB entry 5d1k: Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2015-08-04
Authors: Liang, Y.-H., Li, S., Weissman, A.M., Ji, X.
PDB entry 5d1l: Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7 (Y165A)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.618 Å
Deposited: 2015-08-04
Authors: Liang, Y.-H., Li, S., Weissman, A.M., Ji, X.
PDB entry 5d1m: Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7 (P199A)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.581 Å
Deposited: 2015-08-04
Authors: Liang, Y.-H., Li, S., Weissman, A.M., Ji, X.
PDB entry 5d1n: Crystal structure of the 16S rRNA (adenine(1408)-N(1))-methyltransferase with its reaction by-product SAH from Catenulisporales acidiphilia
Classification: TRANSFERASE
Source organism: Catenulispora acidiphila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.713 Å
Deposited: 2015-08-04
Authors: Witek, M.A., Conn, G.L.
PDB entry 5d1o: Archaeal ATP-dependent RNA ligase - form 1
Classification: LIGASE
Source organism: Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.648 Å
Deposited: 2015-08-04
Authors: Murakami, K.S.
PDB entry 5d1p: Archaeal ATP-dependent RNA ligase - form 2
Classification: LIGASE
Source organism: Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2015-08-04
Authors: Murakami, K.S.
PDB entry 5d1q: IsdB NEAT2 bound by clone D2-06
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus (strain bovine RF122 / ET3-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.22 Å
Deposited: 2015-08-04
Authors: Deng, X.
PDB entry 5d1r: Crystal structure of Mycobacterium tuberculosis Rv1816 transcriptional regulator.
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-08-04
Authors: Chou, T.-H., Delmar, J., Su, C.-C., Yu, E.
PDB entry 5d1s: Anthrax toxin lethal factor with hydroxamic acid inhibitor
Classification: Hydrolase/hydrolase inhibitor
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-08-04
Authors: Maize, K.M., Finzel, B.C.
PDB entry 5d1t: Anthrax toxin lethal factor with hydroxamic acid inhibitor
Classification: hydrolase/hydrolase inhibitor
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-08-04
Authors: Maize, K.M., Finzel, B.C.
PDB entry 5d1u: Anthrax toxin lethal factor with hydroxamic acid inhibitor
Classification: Hydrolase/hydrolase inhibitor
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8503 Å
Deposited: 2015-08-04
Authors: Maize, K.M., Finzel, B.C.
PDB entry 5d1v: Crystal Structure and Thermal Stability of Hemoglobin from Thermophilic Phototrophic Bacterium Chloroflexus aurantiacus
Classification: OXYGEN TRANSPORT
Source organism: Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2015-08-04
Authors: Fromme, R., Holl, M., Tang, J.K.
PDB entry 5d1w: Crystal structure of Mycobacterium tuberculosis Rv3249c transcriptional regulator.
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.59 Å
Deposited: 2015-08-04
Authors: Chou, T.-H., Delmar, J., Su, C.-C., Yu, E.
PDB entry 5d1x: IsdB NEAT2 bound by D4-30
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus (strain USA300)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2015-08-04
Authors: Deng, X.
PDB entry 5d1y: Low resolution crystal structure of human ribonucleotide reductase alpha6 hexamer in complex with dATP
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 9.005 Å
Deposited: 2015-08-04
Authors: Ando, N., Li, H., Brignole, E.J., Thompson, S., McLaughlin, M.I., Page, J., Asturias, F., Stubbe, J., Drennan, C.L.
PDB entry 5d1z: IsdB NEAT1 bound by clone D4-10
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus (strain MSSA476)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.17 Å
Deposited: 2015-08-04
Authors: Deng, X.
PDB entry 5d21: Multivalency Effects in Glycopeptide Dendrimer Inhibitors of Pseudomonas aeruginosa Biofilms Targeting Lectin LecA
Classification: SUGAR BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-08-05
Authors: Bergmann, M., Michaud, G., Visini, R., Jin, X., Stocker, A., Darbre, T., Reymond, J.-L.
PDB entry 5d22: Structure of ovine granulocyte-macrophage colony-stimulating factor
Classification: CYTOKINE
Source organism: Ovis aries
Experimental method: X-RAY DIFFRACTION
Resolution: 1.994 Å
Deposited: 2015-08-05
Authors: Felix, J., Savvides, S.N.
PDB entry 5d23: The crystal structure of STPR from Bombyx mori in complex with 13-bp DNA derived from the +290 site of fibroin gene
Classification: TRANSCRIPTION/DNA
Source organism: Bombyx mori; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-08-05
Authors: Cheng, W.
PDB entry 5d24: First bromodomain of BRD4 bound to inhibitor XD26
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-08-05
Authors: Wohlwend, D., Huegle, M., Gerhardt, S.
PDB entry 5d25: First bromodomain of BRD4 bound to inhibitor XD27
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-05
Authors: Wohlwend, D., Huegle, M., Gerhardt, S.
PDB entry 5d26: First bromodomain of BRD4 bound to inhibitor XD28
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2015-08-05
Authors: Wohlwend, D., Huegle, M.
PDB entry 5d27: Crystal Structure of the P-Rex1 PH domain
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2015-08-05
Authors: Cash, J.N., Tesmer, J.J.G.
PDB entry 5d28: Complex of GM-CSF/IL-2 inhibition factor with Granulocyte-macrophage colony-stimulating factor
Classification: VIRAL PROTEIN
Source organism: Orf virus; Ovis aries
Experimental method: X-RAY DIFFRACTION
Resolution: 2.845 Å
Deposited: 2015-08-05
Authors: Felix, J., Savvides, S.N.
PDB entry 5d29: X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a hydroxamate inhibitor JHU241
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-08-05
Authors: Barinka, C., Novakova, Z., Pavlicek, J.
PDB entry 5d2a: Bifunctional dendrimers
Classification: SUGAR BINDING PROTEIN
Source organism: Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.134 Å
Deposited: 2015-08-05
Authors: Michaud, G., Visini, R., Stocker, A., Darbre, T., Reymond, J.L.
PDB entry 5d2b: Crystal structure of a mutated catalytic domain of Human MMP12 in complex with an hydroxamate analogue of RXP470
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2015-08-05
Authors: Rouanet-Mehouas, C., Devel, L., Dive, V., Stura, E.A.
PDB entry 5d2c: Reaction of phosphorylated CheY with imidazole 1 of 3
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2015-08-05
Authors: Page, S., Silversmith, R.E., Bourret, R.B., Collins, E.J.
PDB entry 5d2d: Crystal structure of human 14-3-3 zeta in complex with CFTR R-domain peptide pS753-pS768
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-08-05
Authors: Stevers, L.M., Leysen, S.F.R., Ottmann, C.
PDB entry 5d2e: crystal structure of an N-terminal ketoreductase from macrolactin assembly line
Classification: OXIDOREDUCTASE
Source organism: Bacillus amyloliquefaciens subsp. plantarum (strain DSM 23117 / BGSC 10A6 / FZB42)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2015-08-05
Authors: Keatinge-clay, A.T., Zeng, J.
PDB entry 5d2f: 4-oxalocrotonate decarboxylase from Pseudomonas putida G7 - apo form
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.738 Å
Deposited: 2015-08-05
Authors: Guimaraes, S.L., Nagem, R.A.P.
PDB entry 5d2g: 4-oxalocrotonate decarboxylase from Pseudomonas putida G7 - complexed with magnesium
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.897 Å
Deposited: 2015-08-05
Authors: Guimaraes, S.L., Nagem, R.A.P.
PDB entry 5d2h: 4-oxalocrotonate decarboxylase from Pseudomonas putida G7 - complexed with magnesium and alpha-ketoglutarate
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.936 Å
Deposited: 2015-08-05
Authors: Guimaraes, S.L., Nagem, R.A.P.
PDB entry 5d2i: 4-oxalocrotonate decarboxylase from Pseudomonas putida G7 - complexed with calcium and acetate
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2015-08-05
Authors: Guimaraes, S.L., Nagem, R.A.P.
PDB entry 5d2j: 4-oxalocrotonate decarboxylase from Pseudomonas putida G7 - complexed with magnesium and adipate
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.718 Å
Deposited: 2015-08-05
Authors: Guimaraes, S.L., Nagem, R.A.P.
PDB entry 5d2k: 4-oxalocrotonate decarboxylase from Pseudomonas putida G7 - complexed with magnesium and 2-oxoadipate
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.571 Å
Deposited: 2015-08-05
Authors: Guimaraes, S.L., Nagem, R.A.P.
PDB entry 5d2l: Crystal structure of TCR C7 in complex with HCMV NLV epitope presented by HLA-A2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.511 Å
Deposited: 2015-08-05
Authors: Gao, M., Mariuzza, R.A.
PDB entry 5d2m: Complex between human SUMO2-RANGAP1, UBC9 and ZNF451
Classification: Ligase,Protein Binding
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-08-05
Authors: Cappadocia, L., Lima, C.D.
PDB entry 5d2n: Crystal structure of C25-NLV-HLA-A2 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.099 Å
Deposited: 2015-08-05
Authors: Mariuzza, R.A., Yang, X.
PDB entry 5d2o: 2009 H1N1 PA endonuclease mutant F105S
Classification: HYDROLASE
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-08-05
Authors: Kumar, G., White, S.W.
PDB entry 5d2q: Crystal structure of STPR from Bombyx Mori in complex with 20-bp DNA derived from +290 site of the fibroin gene
Classification: TRANSCRIPTION/DNA
Source organism: Bombyx mori; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-08-06
Authors: Cheng, W.
PDB entry 5d2r: Inhibitor Bound Cell Shape Determinant Protein Csd4 from Helicobacter pylori
Classification: hydrolase/hydrolase inhibitor
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-08-06
Authors: Chan, A.C., Murphy, M.E.
PDB entry 5d2s: Crystal structure of STPR from Bombyx mori in complex with 18-bp DNA containing four repetitive units of ATAC
Classification: TRANSCRIPTION/DNA
Source organism: Bombyx mori; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-08-06
Authors: Cheng, W.
PDB entry 5d2t: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 3 Wild Type
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d2u: Crystal structure of tPphA Variant - H39A
Classification: METAL BINDING PROTEIN
Source organism: Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-08-06
Authors: Su, J.
PDB entry 5d2v: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 4 Wild Type
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d2w: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 5 Wild Type
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d2x: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 6 Round5
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d2y: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 7 Round 5
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.984 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d30: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 9 Round 5
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d32: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 11 round 6
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d33: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 12 round 7
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d37: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 16 round 7
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d38: Directed evolutionary changes in Kemp Eliminase KE07 - Crystal 17 round 7-2
Classification: DE NOVO PROTEIN, LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.427 Å
Deposited: 2015-08-06
Authors: Jackson, C.J., Hong, N.-S., Carr, P.D.
PDB entry 5d39: Transcription factor-DNA complex
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2015-08-06
Authors: Li, J., Niu, F., Ouyang, S., Liu, Z.
PDB entry 5d3a: KIF21A regulatory coiled coil
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.495 Å
Deposited: 2015-08-06
Authors: Bianchi, S., Kraatz, S., Steinmetz, M.O., Kammerer, A.R.
PDB entry 5d3c: Crystal structure of a double mutant catalytic domain of Human MMP12 in complex with an hydroxamate analogue of RXP470
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.314 Å
Deposited: 2015-08-06
Authors: Rouanet-Mehouas, C., Devel, L., Dive, V., Stura, E.A.
PDB entry 5d3d: Crystal structure of Staphylococcal Superantigen-Like protein 3
Classification: IMMUNE SYSTEM
Source organism: Staphylococcus aureus (strain NCTC 8325)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-08-06
Authors: Feitsma, L.J., Huizinga, E.G.
PDB entry 5d3e: Crystal structure of human 14-3-3 gamma in complex with CFTR R-domain peptide pS768-pS795
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2015-08-06
Authors: Stevers, L.M., Leysen, S.F.R., Ottmann, C.
PDB entry 5d3f: Crystal structure of human 14-3-3 zeta in complex with CFTR R-domain peptide pS753-pS768 and stabilizer fusicoccin-A
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2015-08-06
Authors: Stevers, L.M., Leysen, S.F.R., Ottmann, C.
PDB entry 5d3g: Structure of HIV-1 Reverse Transcriptase Bound to a Novel 38-mer Hairpin Template-Primer DNA Aptamer
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-08-06
Authors: Miller, M.T., Tuske, S., Das, K., Arnold, E.
PDB entry 5d3h: First bromodomain of BRD4 bound to inhibitor XD29
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-06
Authors: Wohlwend, D., Huegle, M., Weitzel, G.
PDB entry 5d3i: Crystal structure of the SSL3-TLR2 complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Staphylococcus aureus (strain NCTC 8325)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2015-08-06
Authors: Feitsma, L.J., Huizinga, E.G.
PDB entry 5d3j: First bromodomain of BRD4 bound to inhibitor XD33
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-06
Authors: Wohlwend, D., Huegle, M.
PDB entry 5d3k: Crystal structure of the thioesterase domain of deoxyerythronolide B synthase
Classification: HYDROLASE
Source organism: Saccharopolyspora erythraea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-06
Authors: Bergeret, F., Argyropoulos, P., Boddy, C.N., Schmeing, T.M.
PDB entry 5d3l: First bromodomain of BRD4 bound to inhibitor XD35
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-08-06
Authors: Wohlwend, D., Huegle, M.
PDB entry 5d3m: Folate ECF transporter: AMPPNP bound state
Classification: TRANSPORT PROTEIN
Source organism: Lactobacillus delbrueckii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.303 Å
Deposited: 2015-08-06
Authors: Guskov, A., Swier, L.J.Y.M., Slotboom, D.J.
PDB entry 5d3n: First bromodomain of BRD4 bound to inhibitor XD40
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-08-06
Authors: Wohlwend, D., Huegle, M.
PDB entry 5d3o: Crystal structure of full length human glutaminase C expressed in E.coli
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.791 Å
Deposited: 2015-08-06
Authors: Huang, Q.
PDB entry 5d3p: First bromodomain of BRD4 bound to inhibitor XD41
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-08-06
Authors: Wohlwend, D., Huegle, M.
PDB entry 5d3q: Dynamin 1 GTPase-BSE fusion dimer complexed with GDP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-06
Authors: Anand, R., Eschenburg, S., Reubold, T.F.
PDB entry 5d3r: First bromodomain of BRD4 bound to inhibitor XD42
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-08-06
Authors: Wohlwend, D., Huegle, M.
PDB entry 5d3s: First bromodomain of BRD4 bound to inhibitor XD44
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2015-08-06
Authors: Wohlwend, D., Huegle, M.
PDB entry 5d3t: First bromodomain of BRD4 bound to inhibitor XD47
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2015-08-06
Authors: Wohlwend, D., Huegle, M.
PDB entry 5d3u: Crystal structure of the 5-selective H176F mutant of Cytochrome TxtE
Classification: OXIDOREDUCTASE
Source organism: Streptomyces scabies (strain 87.22)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2015-08-06
Authors: Cahn, J.K.B., Dodani, S.C., Arnold, F.H.
PDB entry 5d3v: Crystal Structure of the P-Rex1 PH domain with Citrate Bound
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.852 Å
Deposited: 2015-08-06
Authors: Cash, J.N., Tesmer, J.J.G.
PDB entry 5d3w: Crystal Structure of the P-Rex1 PH domain with Sulfate Bound
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.852 Å
Deposited: 2015-08-06
Authors: Cash, J.N., Tesmer, J.J.G.
PDB entry 5d3x: Crystal Structure of the P-Rex1 PH domain with Inositol-(1,3,4,5)-Tetrakisphosphate Bound
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2015-08-06
Authors: Cash, J.N., Tesmer, J.J.G.
PDB entry 5d3y: Crystal Structure of the P-Rex1 PH domain with Inositol-(1,3,4,5)-Tetrakisphosphate Bound
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-08-06
Authors: Cash, J.N., Tesmer, J.J.G.
PDB entry 5d3z: Crystal structure of the thioesterase domain of deoxyerythronolide B synthase in complex with a small phosphonate inhibitor
Classification: hydrolase/hydrolase inhibitor
Source organism: Saccharopolyspora erythraea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-08-06
Authors: Bergeret, F., Argyropoulos, P., Boddy, C.N., Schmeing, T.M.
PDB entry 5d40: Crystal structure of the 5-selective H176Y mutant of Cytochrome TxtE
Classification: OXIDOREDUCTASE
Source organism: Streptomyces scabies (strain 87.22)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2015-08-06
Authors: Cahn, J.K.B., Dodani, S.C., Arnold, F.H.
PDB entry 5d41: EGFR kinase domain in complex with mutant selective allosteric inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2015-08-07
Authors: Yun, C.-H., Park, E., Eck, M.J.
PDB entry 5d42: 2009 H1N1 PA endonuclease mutant F105S in complex with dTMP
Classification: HYDROLASE
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-08-07
Authors: Kumar, G., White, S.W.
PDB entry 5d43: crystal structrue of Mouse centrin 1 in calcium-saturated form
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2015-08-07
Authors: Park, J.H., Kim, S.Y., Kim, D.S.
PDB entry 5d45: Crystal Structure of FABP4 in complex with 3-(5-cyclopropyl-2,3-diphenyl-1H-indol-1-yl)propanoic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-08-07
Authors: Tagami, U., Takahashi, K., Igarashi, S., Ejima, C., Yoshida, T., Takeshita, S., Miyanaga, W., Sugiki, M., Tokumasu, M., Hatanaka, T., Kashiwagi, T., Ishikawa, K., Miyano, H., Mizukoshi, T.
PDB entry 5d46: Structural Basis for a New Templated Activity by Terminal Deoxynucleotidyl Transferase: Implications for V(D)J Recombination
Classification: TRANSFERASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-08-07
Authors: Loc'h, J., Rosario, S., Delarue, M.
PDB entry 5d47: Crystal Structure of FABP4 in complex with 3-[5-cyclopropyl-3-(3-methoxypyridin-4-yl)-2-phenyl-1H-indol-1-yl] propanoic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-07
Authors: Tagami, U., Takahashi, K., Igarashi, S., Ejima, C., Yoshida, T., Takeshita, S., Miyanaga, W., Sugiki, M., Tokumasu, M., Hatanaka, T., Kashiwagi, T., Ishikawa, K., Miyano, H., Mizukoshi, T.
PDB entry 5d48: Crystal Structure of FABP4 in complex with 3-{5-cyclopropyl-3-(3,5-dimethyl-1H-pyrazol-4-yl)-2-[3-(propan-2-yloxy) phenyl]-1H-indol-1-yl}propanoic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2015-08-07
Authors: Tagami, U., Takahashi, K., Igarashi, S., Ejima, C., Yoshida, T., Takeshita, S., Miyanaga, W., Sugiki, M., Tokumasu, M., Hatanaka, T., Kashiwagi, T., Ishikawa, K., Miyano, H., Mizukoshi, T.
PDB entry 5d49: Structural Basis for a New Templated Activity by Terminal Deoxynucleotidyl Transferase: Implications for V(D)J Recombination
Classification: TRANSFERASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2015-08-07
Authors: Loc'h, J., Rosario, S., Delarue, M.
PDB entry 5d4a: Crystal Structure of FABP4 in complex with 3-(2-phenyl-1H-indol-1-yl)propanoic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-07
Authors: Tagami, U., Takahashi, K., Igarashi, S., Ejima, C., Yoshida, T., Takeshita, S., Miyanaga, W., Sugiki, M., Tokumasu, M., Hatanaka, T., Kashiwagi, T., Ishikawa, K., Miyano, H., Mizukoshi, T.
PDB entry 5d4b: Structural Basis for a New Templated Activity by Terminal Deoxynucleotidyl Transferase: Implications for V(D)J Recombination
Classification: TRANSFERASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2015-08-07
Authors: Loc'h, J., Rosario, S., Delarue, M.
PDB entry 5d4c: Crystal structure of Thermus thermophilus product complex for transcription initiation with ATP and CTP
Classification: transcription/dna
Source organism: Thermus thermophilus; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2015-08-07
Authors: Zhang, Y., Ebright, R.H.
PDB entry 5d4d: Crystal structure of Thermus thermophilus product complex for transcription initiation with NAD and CTP
Classification: transcription/dna
Source organism: Thermus thermophilus; Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039); Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-08-07
Authors: Zhang, Y., Ebright, R.H.