LiteFold/PDB huggingface dataset:
PDB entry 3t94: Crystal structure of 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP) II complexed with 5'-deoxy-5'-methylthioadenosine and sulfate
Classification: TRANSFERASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.452 Å
Deposited: 2011-08-02
Authors: Zhang, Y., Ealick, S.E.
PDB entry 3t95: Crystal structure of LsrB from Yersinia pestis complexed with autoinducer-2
Classification: SIGNALING PROTEIN
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2011-08-02
Authors: Kavanaugh, J.S., Gakhar, L., Horswill, A.R.
PDB entry 3t96: Iodowillardiine bound to a double cysteine mutant (A452C/S652C) of the ligand binding domain of GluA2
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.872 Å
Deposited: 2011-08-02
Authors: Ahmed, A.H., Wang, S., Chuang, H.H., Oswald, R.E.
PDB entry 3t97: Molecular Architecture of the Transport Channel of the Nuclear Pore Complex: Nup62/Nup54
Classification: PROTEIN TRANSPORT
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2011-08-02
Authors: Chauhan, R., Blobel, G., Melcak, I.
PDB entry 3t98: Molecular Architecture of the Transport Channel of the Nuclear Pore Complex: Nup54/Nup58
Classification: PROTEIN TRANSPORT
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-08-02
Authors: Solmaz, S.R., Blobel, G., Melcak, I.
PDB entry 3t99: Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP and in the absence of cadmium at pH 7.0
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-08-02
Authors: Wang, H., Falck, J., Hall, T.M.T., Shears, S.B.
PDB entry 3t9a: Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with AMPPNP at pH 7.0
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-08-02
Authors: Wang, H., Falck, J., Hall, T.M.T., Shears, S.B.
PDB entry 3t9b: Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with AMPPNP at pH 5.2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2011-08-02
Authors: Wang, H., Falck, J., Hall, T.M.T., Shears, S.B.
PDB entry 3t9c: Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with AMPPNP and inositol hexakisphosphate (IP6)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-08-02
Authors: Wang, H., Falck, J., Hall, T.M.T., Shears, S.B.
PDB entry 3t9d: Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with AMPPNP and 5-(PP)-IP5 (5-IP7)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2011-08-02
Authors: Wang, H., Falck, J., Hall, T.M.T., Shears, S.B.
PDB entry 3t9e: Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP, 5-(PP)-IP5 (5-IP7) and MgF3 (transition state mimic)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-08-02
Authors: Wang, H., Falck, J., Hall, T.M.T., Shears, S.B.
PDB entry 3t9f: Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with ADP and 1,5-(PP)2-IP4 (1,5-IP8)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-02
Authors: Wang, H., Falck, J., Hall, T.M.T., Shears, S.B.
PDB entry 3t9g: The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii
Classification: LYASE
Source organism: Caldicellulosiruptor bescii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2011-08-02
Authors: Alahuhta, P.M., Lunin, V.V.
PDB entry 3t9h: Kainate bound to a double cysteine mutant (A452C/S652C) of the ligand binding domain of GluA2
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.015 Å
Deposited: 2011-08-02
Authors: Ahmed, A.H., Wang, S., Chuang, H.H., Oswald, R.E.
PDB entry 3t9i: Pim1 complexed with a novel 3,6-disubstituted indole at 2.6 Ang Resolution
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-08-02
Authors: Bellamacina, C., Shu, W., Le, V., Nishiguchi, G., Bussiere, D.
PDB entry 3t9j: Crystal structure HP-NAP from strain YS39 in apo form
Classification: METAL TRANSPORT
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-08-03
Authors: Tsuruta, O., Yokoyama, H., Fujii, S.
PDB entry 3t9k: Crystal Structure of ACAP1 C-portion mutant S554D fused with integrin beta1 peptide
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-03
Authors: Sun, F., Pang, X., Zhang, K., Ma, J., Zhou, Q.
PDB entry 3t9l: Structure of N-terminal DUSP-UBL domains of human USP15
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2011-08-03
Authors: Harper, S., Besong, T.M.D., Emsley, J., Scott, D.J., Dreveny, I.
PDB entry 3t9m: Crystal structure of Mutant C221D of Carbapenemase CphA from Aeromonas Hydrophila
Classification: HYDROLASE
Source organism: Aeromonas hydrophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2011-08-03
Authors: Delbruck, H., Hoffmann, K.M.V.
PDB entry 3t9n: Crystal structure of a membrane protein
Classification: MEMBRANE PROTEIN
Source organism: Thermoanaerobacter tengcongensis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.456 Å
Deposited: 2011-08-03
Authors: Yang, M., Zhang, X., Ge, J., Wang, J.
PDB entry 3t9o: Regulatory CZB domain of DgcZ
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-08-03
Authors: Zaehringer, F., Schirmer, T.
PDB entry 3t9p: Crystal structure of a putative mandelate racemase/muconate lactonizing enzyme family protein from Roseovarius
Classification: ISOMERASE
Source organism: Roseovarius sp. TM1035
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2011-08-03
Authors: Agarwal, R., Chamala, S., Evans, B., Foti, R., Gizzi, A., Hillerich, B., Kar, A., LaFleur, J., Seidel, R., Villigas, G., Zencheck, W., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 3t9q: Structure of the Phosphatase Domain of the Cell Fate Determinant SpoIIE from Bacillus subtilis (Mn presoaked)
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2011-08-03
Authors: Levdikov, V.M., Blagova, E.V., Wilkinson, A.J.
PDB entry 3t9t: Crystal structure of BTK mutant (F435T,K596R) complexed with Imidazo[1,5-a]quinoxaline
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2011-08-03
Authors: Han, S., Caspers, N.
PDB entry 3t9u: CNQX bound to an oxidized double cysteine mutant (A452C/S652C) of the ligand binding domain of GluA2
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2011-08-03
Authors: Ahmed, A.H., Oswald, R.E.
PDB entry 3t9v: CNQX bound to a reduced double cysteine mutant (A452C/S652C) of the ligand binding domain of GluA2
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.975 Å
Deposited: 2011-08-03
Authors: Ahmed, A.H., Oswald, R.E.
PDB entry 3t9w: Small laccase from Amycolatopsis sp. ATCC 39116
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis sp. ATCC 39116
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2011-08-03
Authors: Lukk, T., Majumdar, S., Gerlt, J.A., Nair, S.K.
PDB entry 3t9x: Glutamate bound to a double cysteine mutant (V484C/E657C) of the ligand binding domain of GluA2
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.823 Å
Deposited: 2011-08-03
Authors: Ahmed, A.H., Oswald, R.E.
PDB entry 3t9y: Crystal structure of GNAT family acetyltransferase Staphylococcus aureus subsp. aureus USA300_TCH1516
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-03
Authors: Chang, C., Tesar, C., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3t9z: A. fulgidus GlnK3, ligand-free
Classification: SIGNALING PROTEIN
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2011-08-03
Authors: Maier, S., Schleberger, P., Lue, W., Wacker, T., Pflueger, T., Litz, C., Andrade, S.L.A.
PDB entry 3ta0: A. fulgidus GlnK3, MgATP complex
Classification: SIGNALING PROTEIN
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-03
Authors: Maier, S., Schleberger, P., Lue, W., Wacker, T., Pflueger, T., Litz, C., Andrade, S.L.A.
PDB entry 3ta1: A. fulgidus GlnK3, MgADP complex
Classification: SIGNALING PROTEIN
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-08-03
Authors: Maier, S., Schleberger, P., Lue, W., Wacker, T., Pflueger, T., Litz, C., Andrade, S.L.A.
PDB entry 3ta2: A. fulgidus GlnK3, MgATP/2-OG complex
Classification: SIGNALING PROTEIN
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-08-03
Authors: Maier, S., Schleberger, P., Lue, W., Wacker, T., Pflueger, T., Litz, C., Andrade, S.L.A.
PDB entry 3ta3: Structure of the mouse CD1d-Glc-DAG-s2-iNKT TCR complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Mus musculus, Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-08-03
Authors: Girardi, E., Yu, E.D., Zajonc, D.M.
PDB entry 3ta4: Small laccase from Amycolatopsis sp. ATCC 39116 complexed with 1-(3,4-dimethoxyphenyl)-2-(2-methoxyphenoxy)-1,3-dihydroxypropane
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis sp. ATCC 39116
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2011-08-03
Authors: Lukk, T., Majumdar, S., Gerlt, J.A., Nair, S.K.
PDB entry 3ta5: Cobalt bound structure of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family
Classification: HYDROLASE
Source organism: Candidatus Korarchaeum cryptofilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2011-08-03
Authors: Das, U., Smith, P., Shuman, S.
PDB entry 3ta6: Structure of Mycobacterium tuberculosis triosephosphate isomerase
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2011-08-03
Authors: Connor, S.E., Capodagli, G.C., Deaton, M.K., Pegan, S.D.
PDB entry 3ta7: Zinc bound structure of an archaeal member of the LigD 3'-phosphoesterase DNA repair enzyme family
Classification: HYDROLASE
Source organism: Candidatus Korarchaeum cryptofilum OPF8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2011-08-03
Authors: Das, U., Smith, P., Shuman, S.
PDB entry 3ta8: Crystal structure HP-NAP from strain YS39 iron loaded (cocrystallization 5mM)
Classification: METAL TRANSPORT
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-08-03
Authors: Tsuruta, O., Yokoyama, H., Fujii, S.
PDB entry 3ta9: beta-Glucosidase A from the halothermophile H. orenii
Classification: HYDROLASE
Source organism: Halothermothrix orenii
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2011-08-03
Authors: Hofmann, A., Wang, C.K., Kori, L.D., Patel, B.K.
PDB entry 3tab: 5-hydroxycytosine paired with dGMP in RB69 gp43
Classification: Transferase/DNA
Source organism: Enterobacteria phage RB69; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2011-08-03
Authors: Zahn, K.E.
PDB entry 3tac: Crystal Structure of the Liprin-alpha/CASK complex
Classification: TRANSFERASE/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-08-03
Authors: Wei, Z., Zheng, S., Yu, C., Zhang, M.
PDB entry 3tad: Crystal Structure of the Liprin-alpha/Liprin-beta complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2011-08-04
Authors: Wei, Z., Zheng, S., Yu, C., Zhang, M.
PDB entry 3tae: 5-hydroxycytosine paired with dAMP in RB69 gp43
Classification: Transferase/DNA
Source organism: Enterobacteria phage RB69; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2011-08-04
Authors: Zahn, K.E.
PDB entry 3taf: 5-fluorocytosine paired with ddGMP in RB69 gp43
Classification: Transferase/DNA
Source organism: Escherichia phage RB69; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2011-08-04
Authors: Zahn, K.E.
PDB entry 3tag: 5-fluorocytosine paired with dAMP in RB69 gp43
Classification: Transferase/DNA
Source organism: Escherichia phage RB69; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2011-08-04
Authors: Zahn, K.E.
PDB entry 3tah: Crystal structure of an S. thermophilus NFeoB N11A mutant bound to mGDP
Classification: METAL TRANSPORT
Source organism: Streptococcus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2011-08-04
Authors: Ash, M.R., Maher, M.J., Guss, J.M., Jormakka, M.
PDB entry 3tai: Crystal structure of NurA
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2011-08-04
Authors: Chae, J., Kim, Y.C., Cho, Y.
PDB entry 3taj: Crystal structure of C-lobe of bovine lactoferrin complexed with Nabumetone at 1.7A resolution
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-08-04
Authors: Yamini, S., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 3tak: Crystal structure of the complex of DHDPS from Acinetobacter baumannii with Pyruvate at 1.4 A resolution
Classification: LYASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2011-08-04
Authors: Singh, A., Kaushik, S., Sinha, M., Tewari, R., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 3tal: Crystal structure of NurA with manganese
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2011-08-04
Authors: Chae, J., Kim, Y.C., Cho, Y.
PDB entry 3tam: Crystal structure of HIV-1 reverse transcriptase (K103N mutant) in complex with inhibitor M06
Classification: Transferase/transferase Inhibitor
Source organism: HIV-1 M:B_HXB2R
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2011-08-04
Authors: Yan, Y.
PDB entry 3tan: Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to Duplex DNA with Cytosine-Adenine Mismatch at (n-1) Position
Classification: TRANSFERASE/DNA
Source organism: Geobacillus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2011-08-04
Authors: Wang, W., Beese, L.S.
PDB entry 3tao: Structure of Mycobacterium tuberculosis triosephosphate isomerase bound to phosphoglycolohydroxamate
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2011-08-04
Authors: Connor, S.E., Capodagli, G.C., Deaton, M.K., Pegan, S.D.
PDB entry 3tap: Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to Duplex DNA with Cytosine-Adenine Mismatch at (n-3) Position
Classification: TRANSFERASE/DNA
Source organism: Geobacillus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.655 Å
Deposited: 2011-08-04
Authors: Wang, W., Beese, L.S.
PDB entry 3taq: Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to Duplex DNA with Cytosine-Adenine Mismatch at (n-4) Position
Classification: TRANSFERASE/DNA
Source organism: Geobacillus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2011-08-04
Authors: Wang, W., Beese, L.S.
PDB entry 3tar: Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to Duplex DNA with Cytosine-Adenine Mismatch at (n-6) Position
Classification: TRANSFERASE/DNA
Source organism: Geobacillus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2011-08-04
Authors: Wang, W., Beese, L.S.
PDB entry 3tas: Small laccase from Streptomyces viridosporus T7A
Classification: OXIDOREDUCTASE
Source organism: Streptomyces viridosporus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-04
Authors: Lukk, T., Majumdar, S., Gerlt, J.A., Nair, S.K.
PDB entry 3tat: TYROSINE AMINOTRANSFERASE FROM E. COLI
Classification: AMINOTRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 1998-08-12
Authors: Ko, T.P., Yang, W.Z., Wu, S.P., Tsai, H., Yuan, H.S.
PDB entry 3tau: Crystal Structure of a Putative Guanylate Monophosphaste Kinase from Listeria monocytogenes EGD-e
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2011-08-04
Authors: Brunzelle, J.S., Wawrzak, Z., Onopriyenko, O., Kwok, J., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3tav: Crystal structure of a Methionine Aminopeptidase from Mycobacterium abscessus
Classification: HYDROLASE
Source organism: Mycobacterium abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2011-08-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3taw: Crystal structure of a putative glycoside hydrolase (BDI_3141) from Parabacteroides distasonis ATCC 8503 at 1.70 A resolution
Classification: HYDROLASE
Source organism: Parabacteroides distasonis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-08-04
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3tax: A Neutral Diphosphate Mimic Crosslinks the Active Site of Human O-GlcNAc Transferase
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2011-08-04
Authors: Lazarus, M.B., Jiang, J., Pasquina, L., Sliz, P., Walker, S.
PDB entry 3tay: Crystal structure of porcine rotavirus CRW-8 VP8* in complex with N-glycolylneuraminic acid
Classification: SUGAR BINDING PROTEIN, VIRAL PROTEIN
Source organism: Porcine rotavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2011-08-04
Authors: Yu, X., Blanchard, H.
PDB entry 3taz: Crystal structure of NurA bound to dAMP and manganese
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2011-08-04
Authors: Chae, J., Kim, Y.C., Cho, Y.
PDB entry 3tb0: Crystal structure of Rhesus Rotavirus VP8* in complex with N-Glycolylneuraminic acid
Classification: SUGAR BINDING PROTEIN, VIRAL PROTEIN
Source organism: Rhesus rotavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-04
Authors: Yu, X., Blanchard, H.
PDB entry 3tb2: 1-Cys peroxidoxin from Plasmodium Yoelli
Classification: STRUCTURAL GENOMICS,UNKNOWN FUNCTION
Source organism: Plasmodium yoelii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-04
Authors: Qiu, W., Artz, J.D., Vedadi, M., Sharma, S., Houston, S., Lew, J., Wasney, G., Amani, M., Xu, X., Bray, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Hui, R., Bochkarev, A., Structural Genomics Consortium (SGC)
PDB entry 3tb3: Crystal structure of the UCH domain of UCH-L5 with 6 residues deleted
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-05
Authors: Zhou, Z.R., Zha, M., Zhou, J., Hu, H.Y.
PDB entry 3tb4: Crystal structure of the ISC domain of VibB
Classification: HYDROLASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2011-08-05
Authors: Liu, S., Zhang, C., Niu, B., Li, N., Liu, M., Wei, T., Zhu, D., Xu, S., Gu, L.
PDB entry 3tb5: Crystal Structure of the Enterococcus faecalis Methionine aminopeptidase apo form
Classification: HYDROLASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-05
Authors: Kishor, C., Gumpena, R., Reddi, R., Addlagatta, A.
PDB entry 3tb6: Structure of the effector-binding domain of arabinose repressor AraR from Bacillus subtilis
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2011-08-05
Authors: Rezacova, P., Prochazkova, K.
PDB entry 3tb7: The type I crystal structure of Streptococcus agalactiae sortase C1
Classification: HYDROLASE
Source organism: Streptococcus agalactiae serogroup V
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2011-08-05
Authors: Khare, B.
PDB entry 3tb8: Crystal structure of full-length myristoylated HIV-1 Nef
Classification: APOPTOSIS
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.71 Å
Deposited: 2011-08-05
Authors: Dennis, C.A., Harris, M., Jaeger, J.
PDB entry 3tb9: Structure of Yeast Ribonucleotide Reductase 1 Q288A with AMPPNP and CDP
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2011-08-05
Authors: Ahmad, M.F., Kaushal, P.S., Wan, Q., Wijeratna, S.R., Huang, M., Dealwis, C.D.
PDB entry 3tba: Structure of Yeast Ribonucleotide Reductase 1 Q288A with dGTP and ADP
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2011-08-05
Authors: Ahmad, M.F., Kaushal, P.S., Wan, Q., Wijeratna, S.R., Huang, M., Dealwis, C.
PDB entry 3tbb: Small laccase from Streptomyces viridosporus T7A; alternate crystal form.
Classification: OXIDOREDUCTASE
Source organism: Streptomyces viridosporus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-05
Authors: Lukk, T., Majumdar, S., Gerlt, J.A., Nair, S.K.
PDB entry 3tbc: Small laccase from Streptomyces viridosporus T7A; alternate crystal form complexed with acetovanillone.
Classification: OXIDOREDUCTASE
Source organism: Streptomyces viridosporus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-08-05
Authors: Lukk, T., Majumdar, S., Gerlt, J.A., Nair, S.K.
PDB entry 3tbd: Crystal Structure of domain VI and LE1 of human Netrin-G2
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-08-05
Authors: Brasch, J., Liu, Q., Shapiro, L.
PDB entry 3tbe: The crystal structure of the complex of Streptococcus agalactiae sortase C1 and MTSET
Classification: HYDROLASE
Source organism: Streptococcus agalactiae serogroup V
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2011-08-05
Authors: Khare, B.
PDB entry 3tbf: C-terminal domain of glucosamine-fructose-6-phosphate aminotransferase from Francisella tularensis.
Classification: TRANSFERASE
Source organism: Francisella tularensis subsp. tularensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2011-08-05
Authors: Osipiuk, J., Zhou, M., Maltseva, N., Kim, Y., Papazisi, L., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3tbg: Human cytochrome P450 2D6 with two thioridazines bound in active site
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-08-05
Authors: Wang, A., Stout, C.D., Johnson, E.F.
PDB entry 3tbh: Crystal structure of O-Acetyl Serine Sulfhydrylase in complex with octapeptide derived from Serine Acetyl Transferase of Leishmania donovani
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Leishmania donovani; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2011-08-06
Authors: Raj, I., Gourinath, S.
PDB entry 3tbi: Crystal structure of T4 gp33 bound to E. coli RNAP beta-flap domain
Classification: TRANSCRIPTION
Source organism: Enterobacteria phage T4; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2011-08-06
Authors: Twist, K.A.F., Campbell, E.A., Darst, S.A.
PDB entry 3tbj: The 1.7A crystal structure of Actibind a T2 ribonucleases as antitumorigenic agents
Classification: HYDROLASE
Source organism: Aspergillus niger
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-08-07
Authors: Almog, O., Gonzalez, A.
PDB entry 3tbk: Mouse RIG-I ATPase Domain
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2011-08-07
Authors: Civril, F., Bennett, M.D., Hopfner, K.-P.
PDB entry 3tbl: Structure of Mono-ubiquitinated PCNA: Implications for DNA Polymerase Switching and Okazaki Fragment Maturation
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.903 Å
Deposited: 2011-08-07
Authors: Zhang, Z., Lee, M., Lee, E., Zhang, S.
PDB entry 3tbm: Crystal structure of a type 4 CDGSH iron-sulfur protein.
Classification: METAL BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.797 Å
Deposited: 2011-08-07
Authors: Lin, J., Zhang, L., Ye, K.
PDB entry 3tbn: Crystal structure of a miner2 homolog: a type 6 CDGSH iron-sulfur protein.
Classification: METAL BINDING PROTEIN
Source organism: Magnetospirillum magneticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2011-08-07
Authors: Lin, J., Zhang, L., Ye, K.
PDB entry 3tbo: Crystal structure of a type 3 CDGSH iron-sulfur protein.
Classification: METAL BINDING PROTEIN
Source organism: Pyrobaculum calidifontis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2011-08-07
Authors: Lin, J., Zhang, L., Ye, K.
PDB entry 3tbs: CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX THE WITH LCMV-DERIVED GP33 ALTERED PEPTIDE ligand (V3P,Y4A)
Classification: Immune system/agonist
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2011-08-08
Authors: Duru, A.D., Allerbring, E.B., Uchtenhagen, H., Mazumdar, P.A., Badia-Martinez, D., Madhurantakam, C., Sandalova, T., Nygren, P., Achour, A.
PDB entry 3tbt: CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH THE LCMV-DERIVED GP33 ALTERED PEPTIDE ligand (V3P, Y4S)
Classification: Immune system/agonist
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-08
Authors: Duru, A.D., Allerbring, E.B., Uchtenhagen, H., Mazumdar, P.A., Badia-Martinez, D., Madhurantakam, C., Sandalova, T., Nygren, P., Achour, A.
PDB entry 3tbv: CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH THE LCMV-DERIVED GP33 ALTERED PEPTIDE ligand (A2G,V3P,Y4A)
Classification: Immune system/agonist
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-08-08
Authors: Duru, A.D., Allerbring, E.B., Uchtenhagen, H., Mazumdar, P.A., Badia-Martinez, D., Madhurantakam, C., Sandalova, T., Nygren, P., Achour, A.
PDB entry 3tbw: CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH THE LCMV-DERIVED GP33 ALTERED PEPTIDE ligand (A2G, V3P, Y4S)
Classification: Immune system/agonist
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2011-08-08
Authors: Duru, A.D., Allerbring, E.B., Uchtenhagen, H., Mazumdar, P.A., Badia-Martinez, D., Madhurantakam, C., Sandalova, T., Nygren, P., Achour, A.
PDB entry 3tby: CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH THE LCMV-DERIVED GP33 ALTERED PEPTIDE ligand (V3P, Y4F)
Classification: Immune system/agonist
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-08-08
Authors: Duru, A.D., Allerbring, E.B., Uchtenhagen, H., Mazumdar, P.A., Badia-Martinez, D., Madhurantakam, C., Sandalova, T., Nygren, P., Achour, A.
PDB entry 3tc1: Crystal Structure of Octaprenyl Pyrophosphate Synthase from Helicobacter pylori
Classification: TRANSFERASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-08
Authors: Zhang, J.Y., Zhang, X.L., Li, D.F., Zou, Q.M., Wang, D.C.
PDB entry 3tc2: Crystal structure of potato serine protease inhibitor.
Classification: Hydrolase Inhibitor
Source organism: Solanum tuberosum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2011-08-08
Authors: Meulenbroek, E.M., Thomassen, E.A.J., Pannu, N.S.
PDB entry 3tc3: Crystal Structure of SacUVDE
Classification: HYDROLASE
Source organism: Sulfolobus acidocaldarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2011-08-08
Authors: Meulenbroek, E.M., Jala, I., Moolenaar, G.F., Goosen, N., Pannu, N.S.
PDB entry 3tc5: Selective targeting of disease-relevant protein binding domains by O-phosphorylated natural product derivatives
Classification: ISOMERASE/ISOMERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2011-08-08
Authors: Graeber, M., Janczyk, W., Sperl, B., Elumalai, N., Kozany, C., Hausch, F., Holak, T.A., Berg, T.
PDB entry 3tc6: Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR63.
Classification: LYASE
Source organism: Sulfolobus solfataricus P2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2011-08-08
Authors: Vorobiev, S., Su, M., Bjelic, S., Kipnis, Y., Wang, L., Seetharaman, J., Sahdev, S., Xiao, R., Ciccosanti, C., Baker, D., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3tc7: Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR62.
Classification: LYASE
Source organism: Sulfolobus solfataricus P2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2011-08-08
Authors: Vorobiev, S., Su, M., Bjelic, S., Kipnis, Y., Wang, L., Seetharaman, J., Sahdev, S., Xiao, R., Ciccosanti, C., Baker, D., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3tc8: Crystal structure of a Zn-dependent exopeptidase (BDI_3547) from Parabacteroides distasonis ATCC 8503 at 1.06 A resolution
Classification: HYDROLASE
Source organism: Parabacteroides distasonis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2011-08-08
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3tc9: Crystal structure of an auxiliary nutrient binding protein (BT_3476) from Bacteroides thetaiotaomicron VPI-5482 at 2.23 A resolution
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2011-08-08
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3tca: Crystal structure of the Ras-associating and pleckstrin-homology domains of RIAM
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2011-08-08
Authors: Wu, J., Hubbard, S.R.
PDB entry 3tce: Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 5-Hydroxylysine at 2.6 A resolution
Classification: LYASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-08-09
Authors: Shukla, P.K., Kaushik, S., Sinha, M., Kaur, P., Tewari, R., Sharma, S., Singh, T.P.
PDB entry 3tcf: Crystal structure of E. coli OppA complexed with endogenous ligands
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-09
Authors: Klepsch, M.M., Kovermann, M., Low, C., Balbach, J., de Gier, J.W., Slotboom, D.J., Berntsson, R.P.-A.
PDB entry 3tcg: Crystal structure of E. coli OppA complexed with the tripeptide KGE
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-09
Authors: Klepsch, M.M., Kovermann, M., Low, C., Balbach, J., de Gier, J.W., Slotboom, D.J., Berntsson, R.P.-A.
PDB entry 3tch: Crystal structure of E. coli OppA in an open conformation
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2011-08-09
Authors: Klepsch, M.M., Kovermann, M., Low, C., Balbach, J., de Gier, J.W., Slotboom, D.J., Berntsson, R.P.-A.
PDB entry 3tci: Crystal structure of the decameric sequence d(CGGGCGCCCG) as Z type duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.421 Å
Deposited: 2011-08-09
Authors: Venkadesh, S., Mandal, P.K., Gautham, N.
PDB entry 3tcj: CcdB dimer from V. fisheri in complex with one C-terminal domain of F-plasmid CcdA
Classification: TOXIN/ANTITOXIN
Source organism: Aliivibrio fischeri; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2011-08-09
Authors: De Jonge, N., Loris, R.
PDB entry 3tck: Crystal structure of Peptidyl-tRNA hydrolase from Mycobacterium tuberculosis - Form 4
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-09
Authors: Selvaraj, M., Ahmad, R., Varshney, U., Vijayan, M.
PDB entry 3tcl: Crystal Structure of HIV-1 Neutralizing Antibody CH04
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.906 Å
Deposited: 2011-08-09
Authors: Louder, R.K., McLellan, J.S., Pancera, M., Yang, Y., Zhang, B., Bonsignori, M., Kwong, P.D.
PDB entry 3tcm: Crystal Structure of Alanine Aminotransferase from Hordeum vulgare
Classification: TRANSFERASE
Source organism: Hordeum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2011-08-09
Authors: Rydel, T.J., Sturman, E.J., Halls, C., Chen, S., Zeng, J., Evdokimov, A., Duff, S.M.G.
PDB entry 3tcn: Crystal structures of Peptidyl-tRNA hydrolase from Mycobacterium tuberculosis - Form 2 grown in presence of Pentaglycine
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-09
Authors: Selvaraj, M., Ahmad, R., Varshney, U., Vijayan, M.
PDB entry 3tco: Crystallographic and spectroscopic characterization of Sulfolobus solfataricus TrxA1 provide insights into the determinants of thioredoxin fold stability
Classification: OXIDOREDUCTASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-08-09
Authors: Esposito, L., Ruggiero, A., Masullo, M., Ruocco, M.R., Lamberti, A., Arcari, P., Zagari, A., Vitagliano, L.
PDB entry 3tcp: Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC569
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2011-08-09
Authors: Liu, J., Yang, C., Simpson, C., DeRyckere, D., Van Deusen, A., Miley, M., Kireev, D.B., Norris-Drouin, J., Sather, S., Hunter, D., Patel, H.S., Janzen, W.P., Machius, M., Johnson, G., Earp, H.S., Graham, D.K., Frye, S., Wang, X.
PDB entry 3tcq: Crystal Structure of matrix protein VP40 from Ebola virus Sudan
Classification: VIRAL PROTEIN
Source organism: Sudan ebolavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2011-08-09
Authors: Clifton, M.C., Edwards, T.E., Anderson, V., Atkins, K., Raymond, A., Saphire, E.O., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3tcr: Crystal structure of a molybdopterin biosynthesis protein from Mycobacterium abscessus
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-09
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3tcs: Crystal structure of a putative racemase from Roseobacter denitrificans
Classification: METAL BINDING PROTEIN
Source organism: Roseobacter denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2011-08-09
Authors: Eswaramoorthy, S., Chamala, S., Evans, B., Foti, R., Gizzi, A., Hillerich, B., Kar, A., LaFleur, J., Seidel, R., Villigas, G., Zencheck, W., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 3tct: Structure of wild-type TTR in complex with tafamidis
Classification: HORMONE, BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2011-08-09
Authors: Connelly, S., Kelly, J.W., Wilson, I.A.
PDB entry 3tcu: Crystal Structure of NaK2K Channel D68E Mutant
Classification: MEMBRANE PROTEIN
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2011-08-09
Authors: Sauer, D.B., Zeng, W., Raghunathan, S., Jiang, Y.
PDB entry 3tcv: Crystal structure of a GCN5-related N-acetyltransferase from Brucella melitensis
Classification: TRANSFERASE
Source organism: Brucella melitensis biovar Abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2011-08-09
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3tcx: Structure of Engineered Single Domain ICAM-1 D1 with High-Affinity aL Integrin I Domain of Native C-Terminal Helix Conformation
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2011-08-09
Authors: Kang, S., Kim, C.U., Gu, X., Owens, R.M., van Rijn, S.J., Boonyaleepun, V., Mao, Y., Springer, T.A., Jin, M.M.
PDB entry 3tcy: Crystallographic structure of phenylalanine hydroxylase from Chromobacterium violaceum (cPAH) bound to phenylalanine in a site distal to the active site
Classification: OXIDOREDUCTASE
Source organism: Chromobacterium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2011-08-09
Authors: Ronau, J.A., Abu-Omar, M.M., Das, C.
PDB entry 3tcz: Human Pin1 bound to cis peptidomimetic inhibitor
Classification: ISOMERASE/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-08-09
Authors: Zhang, M., Zhang, Y.
PDB entry 3td0: Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2011-08-10
Authors: Kondo, J.
PDB entry 3td1: Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticin
Classification: RNA/ANTIBIOTIC
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-08-10
Authors: Kondo, J.
PDB entry 3td2: Crystal structures of Peptidyl-tRNA hydrolase from Mycobacterium tuberculosis - Form 5
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-08-10
Authors: Selvaraj, M., Ahmad, R., Varshney, U., Vijayan, M.
PDB entry 3td3: Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with glycine
Classification: MEMBRANE PROTEIN,PEPTIDE BINDING PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2011-08-10
Authors: Park, J.S., Lee, W.C., Song, J.H., Kim, H.Y.
PDB entry 3td4: Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with diaminopimelate
Classification: MEMBRANE PROTEIN,PEPTIDE BINDING PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2011-08-10
Authors: Park, J.S., Lee, W.C., Song, J.H., Kim, H.Y.
PDB entry 3td5: Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala
Classification: MEMBRANE PROTEIN/PEPTIDE BINDING PROTEIN
Source organism: Acinetobacter baumannii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-10
Authors: Park, J.S., Lee, W.C., Song, J.H., Kim, H.Y.
PDB entry 3td6: Peptidyl-tRNA hydrolase from Mycobacterium tuberculosis from trigonal partially dehydrated crystal
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2011-08-10
Authors: Selvaraj, M., Ahmad, R., Varshney, U., Vijayan, M.
PDB entry 3td7: Crysal structure of the mimivirus sulfhydryl oxidase R596
Classification: OXIDOREDUCTASE
Source organism: Acanthamoeba polyphaga mimivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2011-08-10
Authors: Hakim, M., Fass, D.
PDB entry 3td8: Structural Analysis of Pneumocystis carinii Dihydrofolate Reductase Complex with NADPH and 2,4-diamino-5-methyl-6-[2'-(4-carboxy-1-pentynyl)-5'-methoxybenzyl]pyrido[2,3-d]pyrimidine
Classification: OXIDOREDUCTASE
Source organism: Pneumocystis carinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-08-10
Authors: Cody, V., Pace, J., Stewart, E.
PDB entry 3td9: Crystal structure of a Leucine binding protein LivK (TM1135) from Thermotoga maritima MSB8 at 1.90 A resolution
Classification: TRANSPORT PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-08-10
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3tda: Competitive replacement of thioridazine by prinomastat in crystals of cytochrome P450 2D6
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2011-08-10
Authors: Wang, A., Stout, C.D., Johnson, E.F.
PDB entry 3tdb: Human Pin1 bound to trans peptidomimetic inhibitor
Classification: ISOMERASE/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.267 Å
Deposited: 2011-08-10
Authors: Zhang, M., Zhang, Y.
PDB entry 3tdc: Crystal Structure of Human Acetyl-CoA carboxylase 2
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2011-08-10
Authors: Dougan, D.R., Mol, C.D.
PDB entry 3tdd: Crystal structure of yeast CP in complex with Belactosin C
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-08-10
Authors: Korotkov, V.S., Ludwig, A., Larionov, O.V., Lygin, A.V., Groll, M., de Meijere, A.
PDB entry 3tde: Crystal structure of S-adenosylmethionine synthetase Rv1392 from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2011-08-10
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3tdf: Crystal structure of the complex of Dihydrodipicolinate synthase from Acinetobacter baumannii with 2-Ketobutanoic acid at 1.99 A resolution
Classification: LYASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2011-08-11
Authors: Kumar, M., Kaushik, S., Sinha, M., Kaur, P., Tewari, R., Sharma, S., Singh, T.P.
PDB entry 3tdg: Structural and functional characterization of Helicobacter pylori DsbG
Classification: OXIDOREDUCTASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-08-11
Authors: Yoon, J.Y., Kim, J., Lee, S.J., Kim, H.S., Im, H.N., Yoon, H., Kim, K.H., Kim, S., Han, B.W., Suh, S.W.
PDB entry 3tdh: Structure of the regulatory fragment of sccharomyces cerevisiae AMPK in complex with AMP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-11
Authors: Mayer, F.V., Heath, R., Underwood, E., Sanders, M.J., Carmena, D., McCartney, R., Leiper, F.C., Xiao, B., Jing, C., Walker, P.A., Haire, L.F., Ogrodowicz, R., Martin, S.R., Schmidt, M.C., Gamblin, S.J., Carling, D.
PDB entry 3tdi: yeast Cul1WHB-Dcn1P acetylated Ubc12N complex
Classification: Ligase/protein binding
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-11
Authors: Scott, D.C., Monda, J.K., Bennett, E.J., Harper, J.W., Schulman, B.A.
PDB entry 3tdj: Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM-97 at 1.95 A resolution
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2011-08-11
Authors: Krintel, C., Frydenvang, K., Gajhede, M., Kastrup, J.S.
PDB entry 3tdk: Crystal Structure of Human UDP-Glucose Dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2011-08-11
Authors: Rajakannan, V., Han, C., Robinson, R.
PDB entry 3tdl: Structure of human serum albumin in complex with DAUDA
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-08-11
Authors: Wang, Y., Luo, Z., Shi, X., Wang, H., Nie, L.
PDB entry 3tdm: Computationally designed TIM-barrel protein, HalfFLR
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2011-08-11
Authors: Harp, J.M., Fortenberry, C., Bowman, E., Profitt, W., Dorr, B., Mizoue, L.
PDB entry 3tdn: Computationally designed two-fold symmetric Tim-barrel protein, FLR
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2011-08-11
Authors: Harp, J.M., Fortenberry, C., Bowman, E., Profitt, W., Dorr, B., Mizoue, L., Meiler, J.
PDB entry 3tdo: Crystal structure of HSC at pH 9.0
Classification: MEMBRANE PROTEIN
Source organism: Peptoclostridium difficile (strain 630)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.197 Å
Deposited: 2011-08-11
Authors: Czyzewski, B.K., Wang, D.-N.
PDB entry 3tdp: Crystal structure of HSC at pH 4.5
Classification: MEMBRANE PROTEIN
Source organism: Clostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2011-08-11
Authors: Czyzewski, B.K., Wang, D.-N.
PDB entry 3tdq: Crystal structure of a fimbrial biogenesis protein PilY2 (PilY2_PA4555) from Pseudomonas aeruginosa PAO1 at 2.10 A resolution
Classification: CELL ADHESION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-08-11
Authors: Joint Center for Structural Genomics (JCSG)