LiteFold/PDB huggingface dataset:
PDB entry 3dxa: Crystal Structure of the DM1 TCR in complex with HLA-B*4405 and decamer EBV antigen
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2008-07-23
Authors: Archbold, J.K., Macdonald, W.A., Gras, S., Rossjohn, J.
PDB entry 3dxb: Structure of the UHM domain of Puf60 fused to thioredoxin
Classification: SPLICING, TRANSCRIPTION
Source organism: Escherichia coli O157:H7; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-24
Authors: Corsini, L., Hothorn, M., Scheffzek, K., Stier, G., Sattler, M.
PDB entry 3dxc: Crystal structure of the intracellular domain of human APP in complex with Fe65-PTB2
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-24
Authors: Radzimanowski, J., Sinning, I., Wild, K.
PDB entry 3dxd: Crystal structure of the intracellular domain of human APP (T668E mutant) in complex with Fe65-PTB2
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-24
Authors: Radzimanowski, J., Sinning, I., Wild, K.
PDB entry 3dxe: Crystal structure of the intracellular domain of human APP (T668A mutant) in complex with Fe65-PTB2
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-07-24
Authors: Radzimanowski, J., Sinning, I., Wild, K.
PDB entry 3dxf: Crystal structure of the HSCARG R37A mutant
Classification: NADPH-BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-24
Authors: Li, Y., Meng, G., Dai, X., Luo, M., Zheng, X.
PDB entry 3dxg: Ribonuclease A- uridine 5' phosphate complex
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2008-07-24
Authors: Tsirkone, V.G., Dossi, K., Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G., Kontou, M.
PDB entry 3dxh: Ribonuclease A uridine 5' diphosphate complex
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-07-24
Authors: Tsirkone, V.G., Dossi, K., Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G., Kontou, M.
PDB entry 3dxi: Crystal structure of the N-terminal domain of a putative aldolase (BVU_2661) from Bacteroides vulgatus
Classification: structural genomics, unknown function
Source organism: Bacteroides vulgatus ATCC 8482
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2008-07-24
Authors: Eswaramoorthy, S., Pabalan, A.A., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3dxj: Crystal structure of thermus thermophilus rna polymerase holoenzyme in complex with the antibiotic myxopyronin
Classification: TRANSCRIPTION,TRANSFERASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-07-24
Authors: Das, K., Arnold, E.
PDB entry 3dxk: Structure of Bos Taurus Arp2/3 Complex with Bound Inhibitor CK0944636
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-07-24
Authors: Nolen, B.J., Tomasevic, N., Russell, A., Pierce, D.W., Jia, Z., Hartman, J., Sakowicz, R., Pollard, T.D.
PDB entry 3dxl: Crystal structure of AeD7 from Aedes Aegypti
Classification: odorant-binding protein
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-07-24
Authors: Andersen, J.F., Calvo, E., Mans, B.J., Ribeiro, J.M.
PDB entry 3dxm: Structure of Bos taurus Arp2/3 Complex with Bound Inhibitor CK0993548
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2008-07-24
Authors: Nolen, B.J., Tomasevic, N., Russell, A., Pierce, D.W., Jia, Z., Hartman, J., Sakowicz, R., Pollard, T.D.
PDB entry 3dxn: Crystal structure of the calcium-dependent kinase from toxoplasma gondii, 541.m00134, kinase domain.
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2008-07-24
Authors: Wernimont, A.K., Lew, J., Kozieradzki, I., Cossar, D., Wasney, G., Lin, Y.H., Hassani, A., Ali, A., Schapira, M., Bochkarev, A., Arrowsmith, C.H., Bountra, C., Wikstrom, M., Edwards, A.M., Hui, R., Artz, J.D., Amani, M., Structural Genomics Consortium (SGC)
PDB entry 3dxo: CRYSTAL STRUCTURE OF A PUTATIVE ISOMERASE OF THE SNOAL-LIKE FAMILY (ATU_0744) FROM AGROBACTERIUM TUMEFACIENS STR. C58 AT 2.70 A RESOLUTION
Classification: ISOMERASE
Source organism: Agrobacterium tumefaciens str. C58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-07-24
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dxp: Crystal structure of a putative aminoglycoside phosphotransferase (reut_a1007) from ralstonia eutropha jmp134 at 2.32 A resolution
Classification: TRANSFERASE
Source organism: Ralstonia eutropha JMP134
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2008-07-24
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dxq: Crystal structure of choline/ethanolamine kinase family protein (NP_106042.1) from MESORHIZOBIUM LOTI at 2.55 A resolution
Classification: TRANSFERASE
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-07-24
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dxr: Crystal structure of the yeast inter-membrane space chaperone assembly TIM9.10
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-24
Authors: Webb, C.T., Gulbis, J.M.
PDB entry 3dxs: Crystal structure of a copper binding domain from HMA7, a P-type ATPase
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-25
Authors: Zimmermann, M., Xiao, Z., Clarke, O.B., Gulbis, J.M., Wedd, A.G.
PDB entry 3dxt: Crystal structure of the catalytic core domain of JMJD2D
Classification: OXIDOREDUCTASE, NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-25
Authors: Chen, Z., Zhang, G.
PDB entry 3dxu: The crystal structure of core JMJD2D complexed with FE and N-oxalylglycine
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-25
Authors: Chen, Z., Zhang, G.
PDB entry 3dxv: The crystal structure of alpha-amino-epsilon-caprolactam racemase from Achromobacter obae
Classification: ISOMERASE
Source organism: Achromobacter obae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2008-07-25
Authors: Okazaki, S., Suzuki, A., Komeda, H., Asano, Y., Yamane, T.
PDB entry 3dxw: The crystal structure of alpha-amino-epsilon-caprolactam racemase from Achromobacter obae complexed with epsilon caprolactam
Classification: ISOMERASE
Source organism: Achromobacter obae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2008-07-25
Authors: Okazaki, S., Suzuki, A., Komeda, H., Asano, Y., Yamane, T.
PDB entry 3dxx: Crystal structure of EcTrmB
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-07-25
Authors: Zhou, H.H., Liu, Q., Gao, Y.X., Teng, M.K., Niu, L.W.
PDB entry 3dxy: Crystal structure of EcTrmB in complex with SAM
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-07-25
Authors: Zhou, H.H., Liu, Q., Gao, Y.X., Teng, M.K., Niu, L.W.
PDB entry 3dxz: Crystal structure of EcTrmB in complex with SAH
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2008-07-25
Authors: Zhou, H.H., Liu, Q., Gao, Y.X., Teng, M.K., Niu, L.W.
PDB entry 3dy0: Crystal Structure of Cleaved PCI Bound to Heparin
Classification: BLOOD CLOTTING, HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-07-25
Authors: Li, W., Huntington, J.A.
PDB entry 3dy3: Crystal structure of yeast 20S proteasome in complex with the epimer form of spirolactacystin
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2008-07-25
Authors: Groll, M., Balskus, E., Jacobsen, E.
PDB entry 3dy4: Crystal structure of yeast 20S proteasome in complex with spirolactacystin
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-07-25
Authors: Groll, M., Balskus, E., Jacobsen, E.
PDB entry 3dy5: Allene oxide synthase 8R-lipoxygenase from Plexaura homomalla
Classification: LYASE, OXIDOREDUCTASE
Source organism: Plexaura homomalla
Experimental method: X-RAY DIFFRACTION
Resolution: 3.51 Å
Deposited: 2008-07-25
Authors: Gilbert, N.C., Niebuhr, M., Tsuruta, H., Newcomer, M.E.
PDB entry 3dy6: PPARdelta complexed with an anthranilic acid partial agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-07-25
Authors: Lambert, M.L., Xu, R., Shearer, B.G., Wilson, T.M.
PDB entry 3dy7: X-ray structure of the human mitogen-activated protein kinase kinase 1 (MEK1) in a complex with ligand and MgATP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-07-25
Authors: Ohren, J.F., Pavlovsky, A., Zhang, E.
PDB entry 3dy8: Human Phosphodiesterase 9 in complex with product 5'-GMP (E+P complex)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-07-25
Authors: Liu, S., Mansour, M.N., Dillman, K., Perez, J., Danley, D., Menniti, F.
PDB entry 3dy9: Crystal structure of AeD7 potassium bromide soak
Classification: odorant-binding protein
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-25
Authors: Andersen, J.F., Calvo, E., Mans, B.J., Ribeiro, J.M.
PDB entry 3dya: HIV-1 RT with non-nucleoside inhibitor annulated Pyrazole 1
Classification: TRANSFERASE
Source organism: HIV-1 M:B_HXB2R
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-25
Authors: Harris, S.F., Villasenor, A.
PDB entry 3dyb: proteinase K- digalacturonic acid complex
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2008-07-25
Authors: Larson, S.B., Day, J.S., McPherson, A., Cudney, R., Nguyen, C., Center for High-Throughput Structural Biology (CHTSB)
PDB entry 3dyc: Structure of E322Y Alkaline Phosphatase in Complex with Inorganic Phosphate
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.303 Å
Deposited: 2008-07-25
Authors: Zalatan, J.G., Fenn, T.D., Herschlag, D.
PDB entry 3dyd: Human Tyrosine Aminotransferase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-27
Authors: Karlberg, T., Moche, M., Andersson, J., Arrowsmith, C.H., Berglund, H., Collins, R., Dahlgren, L.G., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Kotenyova, T., Lehtio, L., Nilsson, M.E., Nordlund, P., Nyman, T., Olesen, K., Persson, C., Sagemark, J., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Weigelt, J., Welin, M., Wikstrom, M., Wisniewska, M., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3dye: Crystal structure of AED7-norepineprhine complex
Classification: odorant-binding protein
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-07-27
Authors: Andersen, J.F., Calvo, E., Mans, B.J., Ribeiro, J.M.
PDB entry 3dyf: T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-461 and Isopentyl Diphosphate
Classification: TRANSFERASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-07-27
Authors: Cao, R., Gao, Y., Robinson, H., Goddard, A., Oldfield, E.
PDB entry 3dyg: T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-461
Classification: TRANSFERASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-27
Authors: Cao, R., Gao, Y., Robinson, H., Goddard, A., Oldfield, E.
PDB entry 3dyh: T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-721
Classification: TRANSFERASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2008-07-27
Authors: Cao, R., Gao, Y., Robinson, H., Goddard, A., Oldfield, E.
PDB entry 3dyi: Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
Classification: HYDROLASE
Source organism: Lactobacillus rhamnosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2008-07-28
Authors: Bennett, M.D., Delabre, M.-L., Holland, R., Norris, G.E.
PDB entry 3dyj: Crystal Structure of the R11R12 Domains of Talin
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-07-28
Authors: Gingras, A.R., Joyce, M.G., Critchley, D.R., Emsley, J.
PDB entry 3dyl: human phosphdiesterase 9 substrate complex (ES complex)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-07-28
Authors: Liu, S., Mansour, M.N., Dillman, K., Perez, J., Danley, D., Menniti, F.
PDB entry 3dym: E. coli (lacZ) beta-galactosidase (H418E)
Classification: HYDROLASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-07-28
Authors: Juers, D.H., Huber, R.E., Matthews, B.W.
PDB entry 3dyn: human phosphodiestrase 9 in complex with cGMP (Zn inhibited)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-28
Authors: Liu, S., Mansour, M.N., Dillman, K., Perez, J., Danley, D., Menniti, F.
PDB entry 3dyo: E. coli (lacZ) beta-galactosidase (H418N) in complex with IPTG
Classification: HYDROLASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-28
Authors: Juers, D.H., Huber, R.E., Matthews, B.W.
PDB entry 3dyp: E. coli (lacZ) beta-galactosidase (H418N)
Classification: HYDROLASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-07-28
Authors: Juers, D.H., Huber, R.E., Matthews, B.W.
PDB entry 3dyq: human phosphodiestrase 9 (inhibited by omitting divalent cation) in complex with cGMP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-28
Authors: Liu, S., Mansour, M.N., Dillman, K., Perez, J., Danley, D., Menniti, F.
PDB entry 3dyr: Crystal structure of E. coli thioredoxin mutant I76T in its oxidized form
Classification: ELECTRON TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-07-28
Authors: Ren, G., Bardwell, J.C.A., Xu, Z.
PDB entry 3dys: human phosphodiestrase-5'GMP complex (EP), produced by soaking with 20mM cGMP+20 mM MnCl2+20 mM MgCl2 for 2 hours, and flash-cooled to liquid nitrogen temperature when substrate was still abudant.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-28
Authors: Liu, S., Mansour, M.N., Dillman, K., Perez, J., Danley, D., Menniti, F.
PDB entry 3dyt: Crystal structure of Snx9PX-BAR (230-595), C2221
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2008-07-28
Authors: Wang, Q., Kaan, H.Y.K., Sondermann, H.
PDB entry 3dyu: Crystal structure of Snx9PX-BAR (230-595), H32
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.1 Å
Deposited: 2008-07-28
Authors: Wang, Q., Kaan, H.Y.K., Sondermann, H.
PDB entry 3dyv: Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
Classification: HYDROLASE
Source organism: Lactobacillus rhamnosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2008-07-28
Authors: Bennett, M.D., Delabre, M.-L., Holland, R., Norris, G.E.
PDB entry 3dz1: Crystal structure of Dihydrodipicolinate Synthase from Rhodopseudomonas palustris at 1.87A resolution
Classification: LYASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2008-07-29
Authors: Satyanarayana, L., Eswaramoorthy, S., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3dz2: Human AdoMetDC with 5'-[(3-aminopropyl)methylamino]-5'deoxy-8-methyladenosine
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2008-07-29
Authors: Bale, S., McCloskey, D.E., Pegg, A.E., Secrist III, J.A., Guida, W.C., Ealick, S.E.
PDB entry 3dz3: Human AdoMetDC F223A mutant with covalently bound S-Adenosylmethionine methyl ester
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2008-07-29
Authors: Bale, S., McCloskey, D.E., Pegg, A.E., Secrist III, J.A., Guida, W.C., Ealick, S.E.
PDB entry 3dz4: Human AdoMetDC with 5'-[(2-carboxamidoethyl)methylamino]-5'-deoxy-8-methyladenosine
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2008-07-29
Authors: Bale, S., McCloskey, D.E., Pegg, A.E., Secrist III, J.A., Guida, W.C., Ealick, S.E.
PDB entry 3dz5: Human AdoMetDC with covalently bound 5'-[(2-aminooxyethyl)methylamino]-5'-deoxy-8-methyladenosine
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2008-07-29
Authors: Bale, S., McCloskey, D.E., Pegg, A.E., Secrist III, J.A., Guida, W.C., Ealick, S.E.
PDB entry 3dz6: Human AdoMetDC with 5'-[(4-aminooxybutyl)methylamino]-5'deoxy-8-ethyladenosine
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2008-07-29
Authors: Bale, S., McCloskey, D.E., Pegg, A.E., Secrist III, J.A., Guida, W.C., Ealick, S.E.
PDB entry 3dz7: Human AdoMetDC with 5'-[(carboxamidomethyl)methylamino]-5'-deoxy-8-methyladenosine
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2008-07-29
Authors: Bale, S., McCloskey, D.E., Pegg, A.E., Secrist III, J.A., Guida, W.C., Ealick, S.E.
PDB entry 3dz8: Crystal structure of human Rab3B GTPase bound with GDP
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-29
Authors: Shen, Y., Tong, Y., Sukumar, D., Tempel, W., Loppnau, P., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Wilkstrom, M., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3dza: Crystal structure of a putative membrane protein of unknown function (yfdx) from klebsiella pneumoniae subsp. at 1.65 A resolution
Classification: UNKNOWN FUNCTION
Source organism: Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-07-29
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dzb: Crystal structure of Prephenate dehydrogenase from Streptococcus thermophilus
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptococcus thermophilus LMG 18311
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2008-07-29
Authors: Zhang, Z., Eswaramoorthy, S., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3dzc: 2.35 Angstrom resolution structure of WecB (VC0917), a UDP-N-acetylglucosamine 2-epimerase from Vibrio cholerae.
Classification: ISOMERASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-07-29
Authors: Minasov, G., Shuvalova, L., Dubrovska, I., Winsor, J., Papazisi, L., Kwon, K., Hasseman, J., Peterson, S.N., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3dzd: Crystal structure of sigma54 activator NTRC4 in the inactive state
Classification: TRANSCRIPTION REGULATOR
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-07-29
Authors: Batchelor, J.D., Doucleff, M., Lee, C.-J., Matsubara, K., De Carlo, S., Heideker, J., Lamers, M.M., Pelton, J.G., Wemmer, D.E.
PDB entry 3dze: Crystal structure of bovine coupling Factor B bound with cadmium
Classification: ELECTRON TRANSPORT
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2008-07-29
Authors: Lee, J.K., Stroud, R.M., Belogrudov, G.I.
PDB entry 3dzf: Crystal structure of human CD38 extracellular domain complexed with a covalent intermediate, ara-F-ribose-5'-phosphate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2008-07-29
Authors: Liu, Q., Kriksunov, I.A., Jiang, H., Graeff, R., Lin, H., Lee, H.C., Hao, Q.
PDB entry 3dzg: Crystal structure of human CD38 extracellular domain, ara-F-ribose-5'-phosphate/nicotinamide complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-07-29
Authors: Liu, Q., Kriksunov, I.A., Jiang, H., Graeff, R., Lin, H., Lee, H.C., Hao, Q.
PDB entry 3dzh: Crystal structure of human CD38 extracellular domain, GTP complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-07-29
Authors: Liu, Q., Kriksunov, I.A., Jiang, H., Graeff, R., Lin, H., Lee, H.C., Hao, Q.
PDB entry 3dzi: Crystal structure of human CD38 extracellular domain, ribose-5'-phosphate intermediate/GTP complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2008-07-29
Authors: Liu, Q., Kriksunov, I.A., Jiang, H., Graeff, R., Lin, H., Lee, H.C., Hao, Q.
PDB entry 3dzj: Crystal structure of human CD38 extracellular domain E226Q mutant, NMN complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-29
Authors: Liu, Q., Kriksunov, I.A., Jiang, H., Graeff, R., Lin, H., Lee, H.C., Hao, Q.
PDB entry 3dzk: Crystal structure of human CD38 extracellular domain, NMN complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2008-07-29
Authors: Liu, Q., Kriksunov, I.A., Jiang, H., Graeff, R., Lin, H., Lee, H.C., Hao, Q.
PDB entry 3dzl: Crystal structure of PhzA/B from Burkholderia cepacia R18194 in complex with (R)-3-oxocyclohexanecarboxylic acid
Classification: BIOSYNTHETIC PROTEIN
Source organism: Burkholderia sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-07-30
Authors: Ahuja, E.G., Mentel, M., Graebsch, A., Breinbauer, R., Blankenfeldt, W.
PDB entry 3dzm: Crystal structure of a major outer membrane protein from Thermus thermophilus HB27
Classification: UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.801 Å
Deposited: 2008-07-30
Authors: Brosig, A., Diederichs, K.
PDB entry 3dzn: Thaumatin by LB nanotemplate method before high X-Ray dose on ESRF ID29 beamline
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2008-07-30
Authors: Tripathi, S., Pechkova, E., Nicolini, C.
PDB entry 3dzo: Crystal structure of a rhoptry kinase from toxoplasma gondii
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-30
Authors: Wernimont, A.K., Lam, A., Ali, A., Lin, Y.H., Ni, S., Ravichandran, M., Wasney, G., Vedadi, M., Kozieradzki, I., Schapira, M., Bochkarev, A., Wilkstrom, M., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Sibley, D., Hui, R., Qiu, W., Structural Genomics Consortium (SGC)
PDB entry 3dzp: Thaumatin by LB nanotemplate method after high X-Ray dose on ESRF ID29 beamline
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2008-07-30
Authors: Tripathi, S., Pechkova, E., Nicolini, C.
PDB entry 3dzq: Human EphA3 kinase domain in complex with inhibitor AWL-II-38.3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-07-30
Authors: Walker, J.R., Syeda, F., Gray, N., Mansoor, W., Mackenzie, F., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 3dzr: Thaumatin by Classical hanging drop method before high X-Ray dose on ESRF ID29 beamline
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2008-07-30
Authors: Tripathi, S., Pechkova, E., Nicolini, C.
PDB entry 3dzt: AeD7-leukotriene E4 complex
Classification: Odorant-binding protein
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-30
Authors: Andersen, J.F., Calvo, E., Mans, B.J., Ribeiro, J.M.
PDB entry 3dzu: Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with BVT.13, 9-cis Retinoic Acid and NCOA2 Peptide
Classification: Transcription/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-07-30
Authors: Chandra, V., Huang, P., Hamuro, Y., Raghuram, S., Wang, Y., Burris, T.P., Rastinejad, F.
PDB entry 3dzv: Crystal structure of 4-methyl-5-(beta-hydroxyethyl)thiazole kinase (NP_816404.1) from ENTEROCOCCUS FAECALIS V583 at 2.57 A resolution
Classification: TRANSFERASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2008-07-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dzw: Structure of Narcissus pseudonarcissus lectin complex with Mannobiose at 1.7 A resolution, form II
Classification: SUGAR BINDING PROTEIN
Source organism: Narcissus pseudonarcissus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-30
Authors: Rizkallah, P.J., Ozbey, S., Sauerborn, M.K.
PDB entry 3dzy: Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with Rosiglitazone, 9-cis Retinoic Acid and NCOA2 Peptide
Classification: Transcription/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-07-30
Authors: Chandra, V., Huang, P., Hamuro, Y., Raghuram, S., Wang, Y., Burris, T.P., Rastinejad, F.
PDB entry 3dzz: CRYSTAL STRUCTURE OF A PUTATIVE PLP-DEPENDENT AMINOTRANSFERASE (LBUL_1103) FROM LACTOBACILLUS DELBRUECKII SUBSP. AT 1.61 A RESOLUTION
Classification: TRANSFERASE
Source organism: Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2008-07-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3e00: Intact PPAR gamma - RXR alpha Nuclear Receptor Complex on DNA bound with GW9662, 9-cis Retinoic Acid and NCOA2 Peptide
Classification: Transcription/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-07-30
Authors: Chandra, V., Huang, P., Hamuro, Y., Raghuram, S., Wang, Y., Burris, T.P., Rastinejad, F.
PDB entry 3e01: HIV-RT with non-nucleoside inhibitor annulated pyrazole 2
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-07-30
Authors: Harris, S.F., Villasenor, A.
PDB entry 3e02: Crystal structure of a duf849 family protein (bxe_c0271) from burkholderia xenovorans lb400 at 1.90 A resolution
Classification: METAL BINDING PROTEIN
Source organism: Burkholderia xenovorans LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3e03: Crystal structure of a putative dehydrogenase from Xanthomonas campestris
Classification: OXIDOREDUCTASE
Source organism: Xanthomonas campestris pv. campestris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2008-07-30
Authors: Sampathkumar, P., Wasserman, S., Rutter, M., Hu, S., Bain, K., Rodgers, L., Atwell, S., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3e04: Crystal structure of human fumarate hydratase
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-07-30
Authors: Kavanagh, K.L., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 3e05: CRYSTAL STRUCTURE OF Precorrin-6y C5,15-methyltransferase FROM Geobacter metallireducens GS-15
Classification: TRANSFERASE
Source organism: Geobacter metallireducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-30
Authors: Patskovsky, Y., Ramagopal, U.A., Toro, R., Dickey, M., Hu, S., Maletic, M., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3e07: Crystal structure of spatzle cystine knot
Classification: CYTOKINE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-07-31
Authors: Hoffmann, A., Funkner, A., Neumann, P., Juhnke, S., Walther, M., Schierhorn, A., Weininger, U., Balbach, J., Reuter, G., Stubbs, M.T.
PDB entry 3e08: H55S mutant Xanthomonas campestris tryptophan 2,3-dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Xanthomonas campestris pv. campestris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-31
Authors: Mowat, C.G., Campbell, L.P.
PDB entry 3e0a: Thaumatin by Classical hanging drop method after high X-Ray dose on ESRF ID29 beamline
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2008-07-31
Authors: Tripathi, S., Pechkova, E., Nicolini, C.
PDB entry 3e0b: Bacillus anthracis Dihydrofolate Reductase complexed with NADPH and 2,4-diamino-5-(3-(2,5-dimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120B)
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-07-31
Authors: Anderson, A.C., Beierlein, J.M., Frey, K.M.
PDB entry 3e0c: Crystal Structure of DNA Damage-Binding protein 1(DDB1)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2008-07-31
Authors: Amaya, M.F., Xu, L., Hao, H., Bountra, C., Wickstroem, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Min, J., Structural Genomics Consortium (SGC)
PDB entry 3e0d: Insights into the Replisome from the Crystral Structure of the Ternary Complex of the Eubacterial DNA Polymerase III alpha-subunit
Classification: TRANSFERASE/DNA
Source organism: Thermus aquaticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.6 Å
Deposited: 2008-07-31
Authors: Wing, R.A., Bailey, S., Steitz, T.A.
PDB entry 3e0e: Crystal structure of a domain of replication protein A from Methanococcus maripaludis. NorthEast Structural Genomics targe MrR110B
Classification: REPLICATION
Source organism: Methanococcus maripaludis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-07-31
Authors: Seetharaman, J., Chen, Y., Wang, H., Janjua, H., Foote, E.L., Xiao, R., Nair, R., Everett, J.K., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3e0f: Crystal structure of a putative metal-dependent phosphoesterase (bad_1165) from bifidobacterium adolescentis atcc 15703 at 2.40 A resolution
Classification: HYDROLASE
Source organism: Bifidobacterium adolescentis ATCC 15703
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-07-31
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3e0g: Structure of the Leukemia Inhibitory Factor Receptor (LIF-R) domains D1-D5
Classification: SIGNALING PROTEIN/CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-07-31
Authors: Lupardus, P.J., Garcia, K.C.
PDB entry 3e0h: Crystal structure of an uncharacterized protein from Chlorobium tepidum. NorthEast Structural Genomics target CtR107.
Classification: structural genomics, unknown function
Source organism: Chlorobaculum tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2008-07-31
Authors: Seetharaman, J., Chen, Y., Wang, H., Janjua, H., Foote, E.L., Xiao, R., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3e0i: Cu2+ substituted Aquifex aeolicus KDO8PS in complex with PEP
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.703 Å
Deposited: 2008-07-31
Authors: Gatti, D.L.
PDB entry 3e0j: X-ray structure of the complex of regulatory subunits of human DNA polymerase delta
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-07-31
Authors: Baranovskiy, A.G., Babayeva, N.D., Pavlov, Y.I., Vassylyev, D.G., Tahirov, T.H.
PDB entry 3e0k: Crystal structure of C-termianl domain of N-acetylglutamate synthase from Vibrio parahaemolyticus
Classification: TRANSFERASE
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2008-07-31
Authors: Chang, C., Shackelford, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3e0l: Computationally Designed Ammelide Deaminase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2008-07-31
Authors: Murphy, P.M., Bolduc, J.M., Gallaher, J.L., Stoddard, B.L., Baker, D.
PDB entry 3e0m: Crystal structure of fusion protein of MsrA and MsrB
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-07-31
Authors: Kim, Y.K., Hwang, K.Y.
PDB entry 3e0n: The X-ray structure of Human Prostasin in complex with DFFR-chloromethyl ketone inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-31
Authors: Spraggon, G., Hornsby, M., Shipway, A., Harris, J.L., Lesley, S.A.
PDB entry 3e0o: Crystal structure of MsrB
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-07-31
Authors: Park, A.K., Shin, Y.J., Kim, Y.K., Chi, Y.M., Hwang, K.Y.
PDB entry 3e0p: The X-ray structure of Human Prostasin in complex with a covalent benzoxazole inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-31
Authors: Spraggon, G., Hornsby, M., Shipway, A., Harris, J.L., Lesley, S.A.
PDB entry 3e0q: Crystal structure of Schistosoma mansoni purine nucleoside phosphorylase complexed with a novel monocyclic inhibitor
Classification: TRANSFERASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-31
Authors: Pereira, H.M., Berdini, V., Ferri, M.R., Cleasby, A., Garratt, R.C.
PDB entry 3e0r: Crystal structure of cppA protein from Streptococcus pneumoniae TIGR4
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-31
Authors: Nocek, B., Mulligan, R., Abdullah, J., Otwinowski, Z., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3e0s: Crystal structure of an uncharacterized protein from Chlorobium tepidum
Classification: structural genomics, unknown function
Source organism: Chlorobaculum tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2008-07-31
Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Powell, A., Ozyurt, S., Smith, D., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3e0u: Crystal structure of T. cruzi GPX1
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-08-01
Authors: Patel, S.H., Hussain, S., Harris, R., Driscoll, P., Djordjevic, S.
PDB entry 3e0v: Crystal structure of pyruvate kinase from Leishmania mexicana in complex with sulphate ions
Classification: TRANSFERASE
Source organism: Leishmania mexicana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-08-01
Authors: Tulloch, L.B., Gillmore, L.A., Walkinshaw, M.D.
PDB entry 3e0w: Crystal structure of pyruvate kinase from Leishmania mexicana
Classification: TRANSFERASE
Source organism: Leishmania mexicana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-08-01
Authors: Tulloch, L.B., Gillmore, L.A., Walkinshaw, M.D.
PDB entry 3e0x: The crystal structure of a Lipase-esterase related protein from Clostridium acetobutylicum ATCC 824
Classification: structural genomics, unknown function
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-08-01
Authors: Tan, K., Sather, A., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3e0y: The crystal structure of a conserved domain from a protein of Geobacter sulfurreducens PCA
Classification: structural genomics, unknown function
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-08-01
Authors: Tan, K., Bigelow, L., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3e0z: Crystal structure of a putative imidazole glycerol phosphate synthase homolog (eubrec_1070) from eubacterium rectale at 1.75 A resolution
Classification: UNKNOWN FUNCTION
Source organism: Eubacterium rectale
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-08-01
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3e10: Crystal structure of Putative NADH Oxidase (NP_348178.1) from CLOSTRIDIUM ACETOBUTYLICUM at 1.40 A resolution
Classification: OXIDOREDUCTASE
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-08-01
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3e11: Crystal structure of a predicted zincin-like metalloprotease (acel_2062) from acidothermus cellulolyticus 11b at 1.80 A resolution
Classification: UNKNOWN FUNCTION
Source organism: Acidothermus cellulolyticus 11B
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-08-01
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3e12: Cu2+ substituted Aquifex aeolicus KDO8PS in complex with KDO8P
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-08-01
Authors: Gatti, D.L.
PDB entry 3e13: Iron reconstituted ferric binding protein from Campylobacter jejuni
Classification: METAL BINDING PROTEIN
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-08-01
Authors: Murphy, M.E.P., Tom-Yew, S.A.L., Bekker, E.G.
PDB entry 3e15: 6-phosphogluconolactonase from Plasmodium vivax
Classification: HYDROLASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-08-01
Authors: Arakaki, T.L., Merritt, E.A.
PDB entry 3e16: X-ray structure of human prostasin in complex with Benzoxazole warhead peptidomimic, lysine in P3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-08-01
Authors: Spraggon, G., Hornsby, M., Shipway, A., Harris, J.L., Lesley, S.A.
PDB entry 3e17: Crystal structure of the second PDZ domain from human Zona Occludens-2
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-08-01
Authors: Chen, H., Tong, S.L., Teng, M.K., Niu, L.W.
PDB entry 3e18: CRYSTAL STRUCTURE OF NAD-BINDING PROTEIN FROM Listeria innocua
Classification: OXIDOREDUCTASE
Source organism: Listeria innocua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-08-02
Authors: Patskovsky, Y., Ramagopal, U.A., Toro, R., Rutter, M., Hu, S., Groshong, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3e19: Crystal Structure of Iron Uptake Regulatory Protein (FeoA) Solved by Sulfur SAD in a Monoclinic Space Group
Classification: TRANSCRIPTION REGULATOR, METAL BINDING PROTEIN
Source organism: Thermococcus thioreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-08-02
Authors: Hughes, R.C., Li, Y., Wang, B.-C., Liu, Z.-J., Ng, J.D.
PDB entry 3e1e: Crystal structure of a Thioesterase family protein from Silicibacter pomeroyi. NorthEast Structural Genomics target SiR180A
Classification: HYDROLASE
Source organism: Silicibacter pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-08-04
Authors: Seetharaman, J., Abashidze, M., Wang, H., Janjua, H., Foote, E.L., Xiao, R., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3e1f: E.Coli (lacZ) beta-galactosidase (H418E) in complex with galactose
Classification: HYDROLASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-08-04
Authors: Huber, R.E., Dugdale, M.L.
PDB entry 3e1g: Snapshots of esterase D from lactobacillus rhamnosus: Insights into a rotation driven catalytic mechanism
Classification: HYDROLASE
Source organism: Lactobacillus rhamnosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-08-04
Authors: Bennett, M.D., Delabre, M.-L., Holland, R., Norris, G.E.
PDB entry 3e1h: Crystal structure of a type III polyketide synthase PKSIIINc from Neurospora crassa
Classification: TRANSFERASE
Source organism: Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2008-08-04
Authors: Goyal, A., Rahman, A., Sankaranarayanan, R.
PDB entry 3e1i: Crystal Structure of BbetaD432A Variant Fibrinogen Fragment D with the Peptide Ligand Gly-His-Arg-Pro-amide
Classification: BLOOD CLOTTING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-08-04
Authors: Bowley, S.R., Lord, S.T.
PDB entry 3e1j: Crystal structure of E. coli Bacterioferritin (BFR) with an unoccupied ferroxidase centre (APO-BFR).
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-08-04
Authors: Crow, A., Lawson, T., Lewin, A., Moore, G.R., Le Brun, N.
PDB entry 3e1k: Crystal structure of Kluyveromyces lactis Gal80p in complex with the acidic activation domain of Gal4p
Classification: TRANSCRIPTION
Source organism: Kluyveromyces lactis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-08-04
Authors: Thoden, J.B., Holden, H.M.
PDB entry 3e1l: Crystal structure of E. coli Bacterioferritin (BFR) soaked in phosphate with an alternative conformation of the unoccupied Ferroxidase centre (APO-BFR II).
Classification: METAL BINDING PROTEIN
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-08-04
Authors: Crow, A., Lawson, T., Lewin, A., Moore, G.R., Le Brun, N.
PDB entry 3e1m: Crystal structure of E. coli Bacterioferritin (BFR) obtained after soaking APO-BFR crystals for 2.5 minutes in FE2+ (2.5M FE(II)-BFR)
Classification: METAL BINDING PROTEIN
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-08-04
Authors: Crow, A., Lawson, T., Lewin, A., Moore, G.R., Le Brun, N.
PDB entry 3e1n: Crystal structure of E. coli Bacterioferritin (BFR) after a 65 minute (aerobic) exposure to FE(II) revealing a possible MU-OXO bridge/MU-Hydroxy bridged DIIRON intermediate at the ferroxidase centre. (FE(III)-O-FE(III)-BFR).
Classification: METAL BINDING PROTEIN
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-08-04
Authors: Crow, A., Lawson, T., Lewin, A., Moore, G.R., Le Brun, N.
PDB entry 3e1o: Crystal structure of E. coli Bacterioferritin (BFR) with two ZN(II) ION sites at the Ferroxidase centre (ZN-BFR).
Classification: METAL BINDING PROTEIN
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-08-04
Authors: Crow, A., Lawson, T., Lewin, A., Moore, G.R., Le Brun, N.
PDB entry 3e1p: Crystal structure of E. coli Bacterioferritin (BFR) in which the Ferroxidase centre is inhibited with ZN(II) and high occupancy iron is bound within the cavity.
Classification: METAL BINDING PROTEIN
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-08-04
Authors: Crow, A., Lawson, T., Lewin, A., Moore, G.R., Le Brun, N.
PDB entry 3e1q: Crystal structure of W133F variant E. coli Bacterioferritn with iron.
Classification: METAL BINDING PROTEIN
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-08-04
Authors: Crow, A., Lawson, T.L., Lewin, A., Moore, G.R., Le Brun, N.E.
PDB entry 3e1r: Midbody targeting of the ESCRT machinery by a non-canonical coiled-coil in CEP55
Classification: Cell cycle/Transport Protein
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-08-04
Authors: Lee, H.H., Elia, N., Ghirlando, R., Lippincott-Schwartz, J., Hurley, J.H.
PDB entry 3e1s: Structure of an N-terminal truncation of Deinococcus radiodurans RecD2
Classification: HYDROLASE
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-08-04
Authors: Saikrishnan, K., Griffiths, S.P., Cook, N., Court, R., Wigley, D.B.
PDB entry 3e1t: Structure and action of the myxobacterial chondrochloren halogenase CndH, a new variant of FAD-dependent halogenases
Classification: FLAVOPROTEIN
Source organism: Chondromyces crocatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-08-04
Authors: Buedenbender, S., Rachid, S., Mueller, R., Schulz, G.E.
PDB entry 3e1u: The Crystal Structure of the Anti-Viral APOBEC3G Catalytic Domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-08-04
Authors: Holden, L., Prochnow, C., Chang, Y.P., Bransteitter, R., Chelico, L., Sen, U., Stevens, R.C., Goodman, R.F., Chen, X.S.
PDB entry 3e1v: H. influenzae beta-carbonic anhydrase, variant D44N
Classification: LYASE
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-08-04
Authors: Rowlett, R.S., Chapnick, D.A., Shah, S.