LiteFold/PDB huggingface dataset:
PDB entry 7ucd: Transcription factor FosB/JunD bZIP domain covalently modified with the cysteine-targeting alpha-haloketone compound Z2159931480
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2022-03-16
Authors: Kumar, A., Machius, M.C., Rudenko, G.
PDB entry 7uce: Structure of the anti-HIV-1 neutralizing antibody BG24 Fab fragment
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-03-16
Authors: Barnes, C.O., Bjorkman, P.J.
PDB entry 7ucf: Structure of the BG505 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2022-03-16
Authors: Barnes, C.O., Bjorkman, P.J.
PDB entry 7ucg: Structure of the DU422 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-03-16
Authors: Barnes, C.O., Bjorkman, P.J.
PDB entry 7uch: AprA Methyltransferase 1 - GNAT in complex with Mn2+ , SAM, and Di-methyl-malonate
Classification: TRANSFERASE
Source organism: Moorena bouillonii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-03-16
Authors: Skiba, M.A., Lao, Y., Smith, J.L.
PDB entry 7uci: SxtA Methyltransferase and decarboxylase didomain in complex with Mn2+ and SAH
Classification: TRANSFERASE
Source organism: Cylindrospermopsis raciborskii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-03-16
Authors: Lao, Y., Skiba, M.A., Smith, J.L.
PDB entry 7ucj: Mammalian 80S translation initiation complex with mRNA and Harringtonine
Classification: RIBOSOME/INHIBITOR
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-16
Authors: Yang, R., Arango, D., Sturgill, D., Oberdoerffer, S.
PDB entry 7uck: 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
Classification: RIBOSOME/INHIBITOR
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-03-16
Authors: Yang, R., Arango, D., Sturgill, D., Oberdoerffer, S.
PDB entry 7ucl: SxtA Methyltransferase variant F458H in complex with Mn2+ and malonate
Classification: TRANSFERASE
Source organism: Cylindrospermopsis raciborskii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-03-16
Authors: Lao, Y., Smith, J.L.
PDB entry 7ucn: The Crystal Structure of Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57:H:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 1.96 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-03-16
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 7ucp: computationally designed macrocycle
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.85 Å
Deposited: 2022-03-17
Authors: Bhardwaj, G., Baker, D., Rettie, S., Glynn, C., Sawaya, M.
PDB entry 7ucq: Pfs230 D1 domain in complex with 230AS-18
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-17
Authors: Tang, W.K., Tolia, N.H.
PDB entry 7ucr: Joint X-ray/neutron structure of the Sarcin-Ricin loop RNA
Classification: RNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2022-03-17
Authors: Harp, J.M., Egli, M.E., Pallan, P.S., Coates, L.
PDB entry 7ucs: The Crystal Structure of Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57:H:H:H:R58 Mutant of hCRBPII with Histidine Insertion in the Hinge Loop Region at 1.92 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2022-03-17
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 7uct: The Crystal Structure of Apo Domain-Swapped Dimer F57:H:H:H:H:H:H:R58 Mutant of HCRBPII with Histidine Insertion in the Hinge Loop Region at 2.5 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2022-03-17
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 7ucu: Horse liver alcohol dehydrogenase with NAD and trifluoroethanol at 85K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-03-17
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7ucv: The Crystal Structure of Apo Domain-Swapped Dimer Q108K:T51D:A28CL36C R58:H:H:H:N59 HCRBPII with Histidine Insertion in the Hinge Loop Region at 2.19 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-03-17
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 7ucw: Structure of mouse Decr1 in complex with 2'-5' oligoadenylate
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-03-17
Authors: Govande, A.A., Kranzusch, P.J.
PDB entry 7ucx: LRP8 11H1 Fab complexed to a cyclized CR1 peptide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2022-03-17
Authors: Argiriadi, M.A., Deng, K., Egan, D., Gao, L., Gizatullin, F., Harlan, J., Karaoglu, D., Qiu, W., Goodearl, A.
PDB entry 7ucy: Integrin alpha IIB beta3 complex with gantofiban
Classification: CELL ADHESION/INHIBITOR
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34996 Å
Deposited: 2022-03-17
Authors: Lin, F.-Y., Zhu, J., Zhu, J., Springer, T.A.
PDB entry 7ucz: The Crystal Structure of Apo Monomer F57:H:H:H:H:H:H:R58 Mutant of HCRBPII with Histidine Insertion in the Hinge Loop Region at 1.1 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2022-03-17
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 7ud0: Room Temperature Drosophila Cryptochrome
Classification: CIRCADIAN CLOCK PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2022-03-17
Authors: Schneps, C.M., Crane, B.R.
PDB entry 7ud1: The Crystal Structure of Apo Monomer F57:H:H:H:R58 HCRBPII with Histidine Insertion in the Hinge Loop Region at 1.3 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2022-03-17
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 7ud3: The Crystal Structure of Domain-Swapped Dimer Q108K:T51D:A28C:L36C:F57:W:W:W:R58 Mutant of hCRBPII with a Histidine Insertion in the Hinge Loop Region at 2.36 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2022-03-17
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 7ud4: Cryo-EM structure of AAV-PHP.eB
Classification: VIRUS
Source organism: Adeno-associated virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.24 Å
Deposited: 2022-03-18
Authors: Jang, S., Shen, H.K., Ding, X., Miles, T.F., Gradinaru, V.
PDB entry 7ud5: Complex between MLL1-WRAD and an H2B-ubiquitinated nucleosome
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.25 Å
Deposited: 2022-03-18
Authors: Niklas, H.A., Rahman, S., Worden, E.J., Wolberger, C.
PDB entry 7ud6: Designed Enzyme SH3-588 (Catechol O-methyltransferase catalytic domain and Src homology 3 binding domain fusion)
Classification: TRANSFERASE
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2022-03-18
Authors: Ongpipattanakul, C., Nair, S.K.
PDB entry 7ud7: Crystal structure of deoxygenated hemoglobin in complex with 5HMF-NO at 1.8 Angstrom
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-18
Authors: Donkor, A.K., Musayev, F.N., Safo, M.K.
PDB entry 7ud8: Crystal structure of carbon monoxy Hemoglobin in complex with 5HMF at 1.8 Angstrom
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-18
Authors: Donkor, A.K., Musayev, F.N., Safo, M.S.
PDB entry 7uda: Structure of the EstG
Classification: HYDROLASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2022-03-18
Authors: Chen, Z., Gabelli, S.B.
PDB entry 7udb: Cryo-EM structure of a synaptobrevin-Munc18-1-syntaxin-1 complex class 2
Classification: EXOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-03-18
Authors: Rizo, J., Bai, X., Stepien, K.P., Xu, J., Zhang, X.
PDB entry 7udc: cryo-EM structures of a synaptobrevin-Munc18-1-syntaxin-1 complex class1
Classification: EXOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-03-18
Authors: Rizo, J., Bai, X., Stepien, K.P., Xu, J., Zhang, X.
PDB entry 7udd: Horse liver alcohol dehydrogenase complexed with NAD+ and 2,2,2-trifluoroethanol at 150 K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-03-18
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7ude: Horse liver alcohol dehydrogenase with NAD and trifluoroethanol at 125 K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-03-18
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7udf: The crystal structure of F298V CYP199A4 bound to 4-n-propylbenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-03-18
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 7udg: Integrin alpha IIB beta3 complex with lotrafiban
Classification: CELL ADHESION/INHIBITOR
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.80007 Å
Deposited: 2022-03-19
Authors: Lin, F.-Y., Zhu, J., Zhu, J., Springer, T.A.
PDB entry 7udh: Integrin alpha IIB beta3 complex with BMS4-3
Classification: CELL ADHESION/INHIBITOR
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99999 Å
Deposited: 2022-03-19
Authors: Lin, F.-Y., Zhu, J., Zhu, J., Springer, T.A.
PDB entry 7udi: Full-length dimer of DNA-Damage Response Protein C from Deinococcus radiodurans
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2022-03-19
Authors: Szabla, R., Li, M.C., Junop, M.S.
PDB entry 7udj: Crystal structure of designed helical repeat protein RPB_PEW3_R4 bound to PAWx4 peptide
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-03-20
Authors: Redler, R.L., Chang, Y., Bhabha, G., Ekiert, D.
PDB entry 7udk: Crystal structure of designed helical repeat protein RPB_LRP2_R4 bound to LRPx4 peptide
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å
Deposited: 2022-03-20
Authors: Chang, Y., Redler, R.L., Bhabha, G., Ekiert, D.C.
PDB entry 7udl: Crystal structure of designed helical repeat protein RPB_PLP1_R6 bound to PLPx6 peptide
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-03-20
Authors: Chang, Y., Redler, R.L., Bhabha, G., Ekiert, D.C.
PDB entry 7udm: Crystal structure of designed helical repeat protein RPB_PLP1_R6 in alternative conformation 1 (with peptide)
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-03-20
Authors: Chang, Y., Redler, R.L., Bhabha, G., Ekiert, D.C.
PDB entry 7udn: Crystal structure of designed helical repeat protein RPB_PLP1_R6 in alternative conformation 2
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-03-20
Authors: Chang, Y., Redler, R.L., Bhabha, G., Ekiert, D.C.
PDB entry 7udo: Crystal structure of designed helical repeat protein RPB_LRP2_R4 (proteolysis fragment?), forming pseudopolymeric filaments
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-20
Authors: Redler, R.L., Chang, Y., Bhabha, G., Ekiert, D.C.
PDB entry 7udp: Crystal structure of COQ8A-CA157 inhibitor complex in space group C2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2022-03-20
Authors: Bingman, C.A., Murray, N., Smith, R.W., Pagliarini, D.J.
PDB entry 7udq: Crystal structure of COQ8A-CA157 inhibitor complex in space group P1
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-20
Authors: Bingman, C.A., Murray, N., Smith, R.W., Pagliarini, D.J.
PDB entry 7udr: Horse liver alcohol dehydrogenase with NAD and pentafluorobenzyl alcohol at 25 K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-03-20
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7uds: Structure of lineage I (Pinneo) Lassa virus glycoprotein bound to Fab 25.10C
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lassa mammarenavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-20
Authors: Buck, T.K., Enriquez, A.E., Hastie, K.M.
PDB entry 7udt: cryo-EM structure of the rigor state wild type myosin-15-F-actin complex (symmetry expansion and re-centering)
Classification: MOTOR PROTEIN
Source organism: Gallus gallus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2022-03-20
Authors: Gong, R., Reynolds, M.J., Alushin, G.M.
PDB entry 7udu: cryo-EM structure of the ADP state wild type myosin-15-F-actin complex (symmetry expansion and re-centering)
Classification: MOTOR PROTEIN
Source organism: Gallus gallus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.15 Å
Deposited: 2022-03-20
Authors: Gong, R., Reynolds, M.J., Alushin, G.M.
PDB entry 7udv: Designed pentameric proton channel LLQL
Classification: MEMBRANE PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-03-20
Authors: Kratochvil, H.T., Thomaston, J.L., Liu, L., DeGrado, W.F.
PDB entry 7udw: Designed pentameric proton channel QQLL
Classification: MEMBRANE PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-03-20
Authors: Kratochvil, H.T., Thomaston, J.L., Mravic, M., Nicoludis, J., Liu, L., DeGrado, W.F.
PDB entry 7udx: Designed pentameric proton channel QLQL
Classification: MEMBRANE PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2022-03-20
Authors: Kratochvil, H.T., Thomaston, J.L., Liu, L., DeGrado, W.F.
PDB entry 7udy: Designed pentameric channel QLLL
Classification: MEMBRANE PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-03-20
Authors: Kratochvil, H.T., Thomaston, J.L., Liu, L., DeGrado, W.F.
PDB entry 7udz: Designed pentameric proton channel LQLL
Classification: MEMBRANE PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2022-03-20
Authors: Kratochvil, H.T., Thomaston, J.L., Mravic, M., Nicoludis, J.M., Liu, L., DeGrado, W.F.
PDB entry 7ue0: Integrin alpha IIB beta3 complex with fradafiban
Classification: CELL ADHESION/INHIBITOR
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74196 Å
Deposited: 2022-03-20
Authors: Lin, F.-Y., Zhu, J., Zhu, J., Springer, T.A.
PDB entry 7ue1: HIV-1 Integrase Catalytic Core Domain Mutant (KGD) in Complex with Inhibitor GRL-142
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-03-21
Authors: Aoki, M., Aoki-Ogata, H., Bulut, H., Hayashi, H., Davis, D., Hasegawa, K., Yarchoan, R., Ghosh, A.K., Pau, A.K., Mitsuya, H.
PDB entry 7ue2: Crystal structure of designed helical repeat protein RPB_PLP3_R6 bound to PLPx6 peptide
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2022-03-21
Authors: Chang, Y., Ekiert, D.C., Bhabha, G.
PDB entry 7ue3: PANK3 complex structure with compound PZ-3804
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-03-21
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7ue4: PANK3 complex structure with compound PZ-3855
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-03-21
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7ue5: PANK3 complex structure with compound PZ-3741
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-03-21
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7ue6: PANK3 complex structure with compound PZ-3802
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2022-03-21
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7ue7: PANK3 complex structure with compound PZ-3883
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-03-21
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7ue8: PANK3 complex structure with compound PZ-3890
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2022-03-21
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7ue9: Structure of anti-C3d Fab(3d8b) in complex with C3d
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-03-21
Authors: Olland, A.M., White, A., Suto, R.K.
PDB entry 7uea: Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO1)
Classification: PHOTOSYNTHESIS
Source organism: Chlorobaculum tepidum TLS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2022-03-21
Authors: Puskar, R., Truong, C.D., Swain, K., Li, S., Cheng, K.-W., Wang, T.Y., Poh, Y.-P., Liu, H., Chou, T.-F., Nannenga, B., Chiu, P.-L.
PDB entry 7ueb: Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO2)
Classification: PHOTOSYNTHESIS
Source organism: Chlorobaculum tepidum TLS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2022-03-21
Authors: Puskar, R., Truong, C.D., Swain, K., Li, S., Cheng, K.-W., Wang, T.Y., Poh, Y.-P., Liu, H., Chou, T.-F., Nannenga, B., Chiu, P.-L.
PDB entry 7uec: Horse liver alcohol dehydrogenase with NAD and pentafluorobenzyl alcohol at 50 K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-03-21
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7ued: Crystal structure of full length mesothelin bound with MORAb-009 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-03-21
Authors: Zhan, J., Esser, L., Lin, D., Tang, W.K., Xia, D.
PDB entry 7uee: Horse liver alcohol dehydrogenase with NAD and pentafluorobenzyl alcohol at 75 K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-03-21
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7uef: Horse liver alcohol dehydrogenase with NAD and pentafluorobenzyl alcohol at 85 K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-03-21
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7ueg: Cryo-EM of bundling pili from Pyrobaculum calidifontis
Classification: PROTEIN FIBRIL
Source organism: Pyrobaculum calidifontis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-03-21
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7ueh: Pyruvate kinase from Zymomonas mobilis
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-03-21
Authors: McFarlane, J.S., Meneely, K.M., Lamb, A.L.
PDB entry 7uei: Horse liver alcohol dehydrogenase with NAD and pentafluorobenzyl alcohol at 100 K, 1.2 A, crystal 16
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-03-21
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7uej: horse liver alcohol dehydrogenase with NAD and pentafluorobenzyl alcohol at 150 K
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-03-21
Authors: Plapp, B.V., Gakhar, L.
PDB entry 7uek: Crystal structure of a de novo designed ovoid TIM barrel OT3
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-21
Authors: Chu, A.E., Fernandez, D., Huang, P.-S.
PDB entry 7uel: Genetic and structural basis for the human anti-alpha-galactosyl antibody response
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-22
Authors: Langley, D.B., Christ, D.
PDB entry 7uem: Genomic and structural basis for the human anti-alpha-galactosyl antibody response
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.314 Å
Deposited: 2022-03-22
Authors: Langley, D.B., Christ, D.
PDB entry 7uen: Genetic and structural basis of the human anti-alpha-galactosyl antibody response
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-03-22
Authors: Langley, D.B., Christ, D.
PDB entry 7ueo: PANK3 complex structure with compound PZ-3977
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7uep: PANK3 complex structure with compound PZ-3860
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7ueq: PANK3 complex structure with compound PZ-4061
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7uer: PANK3 complex structure with compound PZ-4071
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7ues: PANK3 complex structure with compound PZ-4202
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7uet: PANK3 complex structure with compound PZ-4140
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7ueu: PANK3 complex structure with compound PZ-4215
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7uev: PANK3 complex structure with compound PZ-4200
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7uex: PANK3 complex structure with compound PZ-4127
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7uey: PANK3 complex structure with compound PZ-4128
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-03-22
Authors: White, S.W., Yun, M., Lee, R.E.
PDB entry 7uez: Apo RibB from Vibrio cholera
Classification: LYASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2022-03-22
Authors: Kenjic, N., Meneely, K.M., Lamb, A.L.
PDB entry 7uf0: RibB from Vibrio cholera bound with D-ribulose-5-phosphate (D-Ru5P)
Classification: LYASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-22
Authors: Kenjic, N., Meneely, K.M., Lamb, A.L.
PDB entry 7uf1: RibB from Vibrio cholera bound with D-Ribose-5-phosphate (D-R5P) and manganese
Classification: LYASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-03-22
Authors: Kenjic, N., Meneely, K.M., Lamb, A.L.
PDB entry 7uf2: RibB from Vibrio cholera bound with D-xylulose-5-phosphate (D-Xy5P) and manganese
Classification: LYASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-22
Authors: Kenjic, N., Meneely, K.M., Lamb, A.L.
PDB entry 7uf3: RibB from Vibrio cholera bound with L-xylulose-5-phosphate (L-Xy5P) and manganese
Classification: LYASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-22
Authors: Kenjic, N., Meneely, K.M., Lamb, A.L.
PDB entry 7uf4: RibB from Vibrio cholera bound with intermediate 1 of the reaction cycle and D-ribulose-5-phosphate (D-Ru5P)
Classification: LYASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-03-22
Authors: Kenjic, N., Meneely, K.M., Lamb, A.L.
PDB entry 7uf5: RibB from Vibrio cholera bound with intermediate 2 in the reaction cycle and the products DHBP and formate
Classification: LYASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-22
Authors: Kenjic, N., Meneely, K.M., Lamb, A.L.
PDB entry 7uf6: Crystal structure of liganded Hb with the 5-HMF analog, MMA509
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-22
Authors: Donkor, A.K., Musayev, F.N., Safo, M.K.
PDB entry 7uf7: Crystal structure of liganded Hb with the 5-HMF analog, MMA503
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-22
Authors: Donkor, A.K., Musayev, F.N., Safo, M.K.
PDB entry 7uf8: Structure of CtdP in complex with penicimutamide E and NADP+
Classification: OXIDOREDUCTASE
Source organism: Penicillium citrinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-22
Authors: Rivera, S., Liu, Z., Newmister, S.A., Gao, X., Sherman, D.H.
PDB entry 7uf9: CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-03-22
Authors: Sevrioukova, I.
PDB entry 7ufa: CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-22
Authors: Sevrioukova, I.
PDB entry 7ufb: CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-03-22
Authors: Sevrioukova, I.
PDB entry 7ufc: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-03-22
Authors: Sevrioukova, I.F.
PDB entry 7ufd: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-03-22
Authors: Sevrioukova, I.F.
PDB entry 7ufe: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-03-22
Authors: Sevrioukova, I.F.
PDB entry 7uff: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-03-22
Authors: Sevrioukova, I.F.
PDB entry 7ufg: Cryo-EM structure of PAPP-A in complex with IGFBP5
Classification: HYDROLASE/Hormone
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2022-03-22
Authors: Judge, R.A., Jain, R., Hao, Q., Ouch, C., Sridar, J., Smith, C.L., Wang, J.C.K., Eaton, D.
PDB entry 7ufh: Integrin alpha IIB beta3 complex with fradafiban (Mn/Ca)
Classification: CELL ADHESION/INHIBITOR
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99768 Å
Deposited: 2022-03-22
Authors: Lin, F.-Y., Zhu, J., Zhu, J., Springer, T.A.
PDB entry 7ufi: VchTnsC AAA+ ATPase with DNA, single heptamer
Classification: DNA BINDING PROTEIN/DNA
Source organism: Vibrio cholerae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-03-22
Authors: Fernandez, I.S., Sternberg, S.H.
PDB entry 7ufj: Structure of human MR1-ethylvanillin in complex with human MAIT A-F7 TCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-22
Authors: Wang, C.J., Rossjohn, J., Le Nours, J.
PDB entry 7ufk: Crystal structure of chimeric omicron RBD (strain BA.2) complexed with human ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-03-22
Authors: Zhang, W., Shi, K., Geng, Q., Ye, G., Aihara, H., Li, F.
PDB entry 7ufl: Crystal structure of chimeric omicron RBD (strain BA.2) complexed with chimeric mouse ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2022-03-22
Authors: Zhang, W., Shi, K., Geng, Q., Ye, G., Aihara, H., Li, F.
PDB entry 7ufm: VchTnsC AAA+ with DNA (double heptamer)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Vibrio cholerae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-03-22
Authors: Fernandez, I.S., Sternberg, S.H.
PDB entry 7ufn: Structure of PfCSP peptide 21 with antibody P3-21
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-03-22
Authors: Tripathi, P., Kwong, P.D.
PDB entry 7ufo: Structure of PfCSP peptide 21 with antibody P3-42
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-23
Authors: Tripathi, P., Kwong, P.D.
PDB entry 7ufp: Structure of a pseudomurein peptide ligase type E from Methanothermus fervidus
Classification: LIGASE
Source organism: Methanothermus fervidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-23
Authors: Carbone, V., Schofield, L.R., Sutherland-Smith, A.J., Ronimus, R.S., Subedi, B.P.
PDB entry 7ufq: Structure of PfCSP peptide 21 with antibody P3-43
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-03-23
Authors: Tripathi, P., Kwong, P.D.
PDB entry 7ufr: Cryo-EM Structure of Bl_Man38A at 2.7 A
Classification: HYDROLASE
Source organism: Bifidobacterium longum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-03-23
Authors: Santos, C.R., Cordeiro, R.L., Domingues, M.N., Borges, A.C., de Farias, M.A., Van Heel, M., Murakami, M.T., Portugal, R.V.
PDB entry 7ufs: Cryo-EM Structure of Bl_Man38B at 3.4 A
Classification: HYDROLASE
Source organism: Bifidobacterium longum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-03-23
Authors: Santos, C.R., Cordeiro, R.L., Domingues, M.N., Borges, A.C., de Farias, M.A., Van Heel, M., Murakami, M.T., Portugal, R.V.
PDB entry 7uft: Cryo-EM Structure of Bl_Man38C at 2.9 A
Classification: HYDROLASE
Source organism: Bifidobacterium longum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-03-23
Authors: Santos, C.R., Cordeiro, R.L., Domingues, M.N., Borges, A.C., de Farias, M.A., Van Heel, M., Murakami, M.T., Portugal, R.V.
PDB entry 7ufu: Cryo-EM Structure of Bl_Man38A nucleophile mutant in complex with mannose at 2.7 A
Classification: HYDROLASE
Source organism: Bifidobacterium longum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-03-23
Authors: Santos, C.R., Cordeiro, R.L., Domingues, M.N., Borges, A.C., de Farias, M.A., Van Heel, M., Murakami, M.T., Portugal, R.V.
PDB entry 7ufv: Crystal structure of the WDR domain of human DCAF1 in complex with OICR-6766
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-23
Authors: Kimani, S., Li, A., Li, Y., Dong, A., Hutchinson, A., Seitova, A., Wilson, B., Al-Awar, R., Vedadi, M., Brown, P., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 7ufw: Pfs230 D1D2 in complex with LMIV230-01
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-23
Authors: Tang, W.K., Tolia, N.H.
PDB entry 7ufx: Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold-insert duplexes (21mer and 10mer) containing the cognate REPE54 sequence and an additional G-C rich sequence, respectively.
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-03-23
Authors: Ward, A.R., Shields, E.T., Snow, C.D.
PDB entry 7ufy: Crystal structure of TDP1 complexed with compound XZ766
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.584 Å
Deposited: 2022-03-23
Authors: Lountos, G.T., Zhao, X.Z., Wang, W., Tropea, J.E., Needle, D., Pommier, Y., Burke, T.R.
PDB entry 7ufz: Crystal structure of TDP1 complexed with compound XZ768
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.559 Å
Deposited: 2022-03-23
Authors: Lountos, G.T., Zhao, X.Z., Wang, W., Tropea, J.E., Needle, D., Pommier, Y., Burke, T.R.
PDB entry 7ug0: TBOA-bound GltPh RSMR mutant in IFS state
Classification: MEMBRANE PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2022-03-23
Authors: Huang, Y., Boudker, O.
PDB entry 7ug1: CDK2 liganded with para chloro ANS
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2022-03-23
Authors: Schonbrunn, E., Martin, M.
PDB entry 7ug2: Crystal structure of the coiled-coil domain of TRIM75
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.052 Å
Deposited: 2022-03-23
Authors: Lou, X.H., Ma, B.B., Zhuang, Y., Li, X.C.
PDB entry 7ug3: Crystal structure of adenosylmethionie-8-amino-7-oxononanoate aminotransferase from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-23
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7ug5: Second bromodomain of BRD3 liganded with BMS-536924
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-23
Authors: Schonbrunn, E., Bikowitz, M.
PDB entry 7ug6: Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-03-24
Authors: Yelland, J.N., Bravo, J.P.K., Black, J.J.B., Taylor, D.W., Johnson, A.W.
PDB entry 7ug7: 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Classification: RIBOSOME
Source organism: Actinoplanes sp.; Escherichia coli; Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2022-03-24
Authors: Rundlet, E.J., Wieland, M., Holm, M., Koller, T.O., Blanchard, S.C., Wilson, D.N.
PDB entry 7ug8: Crystal structure of a solute receptor from Synechococcus CC9311 in complex with alpha-ketovaleric and calcium
Classification: TRANSPORT PROTEIN
Source organism: Synechococcus sp. (strain CC9311)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.796 Å
Deposited: 2022-03-24
Authors: Shah, B.S., Mikolajek, H., Orr, C.M., Mykhaylyk, V., Owens, R.J., Paulsen, I.T.
PDB entry 7ug9: Crystal structure of RNase AM PHP domain
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-03-24
Authors: Doamekpor, S.K., Tong, L.
PDB entry 7uga: Solution structure of NPSL2
Classification: RNA
Source organism: Homo sapiens
Experimental method: SOLUTION NMR, SOLUTION SCATTERING
Deposited: 2022-03-24
Authors: Liu, Y., Keane, S.C.
PDB entry 7ugb: Crystal structure of rat ERK2 complexed with docking peptide from ISG20
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-24
Authors: Torres Robles, J., Stiegler, A.L., Boggon, T.J., Turk, B.E.
PDB entry 7ugc: Structure of the N-terminal domain of ViaA
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 2022-03-24
Authors: Lemak, A., Reichheld, S., Bhandari, V., Houliston, S., Arrowsmith, C.H., Sharpe, S., Houry, W.A.
PDB entry 7ugd: Asp-bound GltPh RSMR mutant in IFS-A1 state
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2022-03-24
Authors: Huang, Y., Boudker, O.
PDB entry 7uge: Bromodomain of CBP liganded with BMS-536924
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.004 Å
Deposited: 2022-03-24
Authors: Schonbrunn, E., Bikowitz, M.
PDB entry 7ugf: First bromodomain of BRD4 liganded with BMS-536924
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-03-24
Authors: Schonbrunn, E., Bikowitz, M.
PDB entry 7ugg: Cryo-EM structure of TRPV3 in complex with the anesthetic dyclonine
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2022-03-24
Authors: Neuberger, A., Nadezhdin, K.D., Sobolevsky, A.I.
PDB entry 7ugh: Crystal Structure of enolase family protein from Naegleria fowleri with bound 2-phosphoglyceric acid
Classification: LYASE
Source organism: Naegleria fowleri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-03-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7ugi: Bromodomain of EP300 liganded with BMS-536924
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-24
Authors: Schonbrunn, E., Bikowitz, M.
PDB entry 7ugj: TBOA-bound GltPh RSMR mutant in OFS state
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2022-03-24
Authors: Huang, Y., Boudker, O.
PDB entry 7ugk: Crystal structure of the human queuine salvage enzyme DUF2419, wild-type apo form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-03-24
Authors: Hung, S.-H., Swairjo, M.A.
PDB entry 7ugl: Bromodomain of CBP liganded with BMS-536924 and SGC-CBP30
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-03-24
Authors: Schonbrunn, E., Bikowitz, M.
PDB entry 7ugm: Crystal Structure of BG24-iGL CDR3mat Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-03-25
Authors: Dam, K.A., Barnes, C.O., Bjorkman, P.J.
PDB entry 7ugn: Cryo-EM structure of BG24 inferred germline Fabs with germline CDR3s and 10-1074 Fabs in complex with HIV-1 Env immunogen BG505-SOSIPv4.1-GT1 - Class 1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-03-25
Authors: Dam, K.A., Bjorkman, P.J.
PDB entry 7ugo: Cryo-EM structure of BG24 inferred germline Fabs with mature CDR3s and 10-1074 Fabs in complex with HIV-1 Env immunogen BG505-SOSIPv4.1-GT1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-03-25
Authors: Dam, K.A., Bjorkman, P.J.
PDB entry 7ugp: Cryo-EM structure of BG24 Fabs with an inferred germline light chain and 10-1074 Fabs in complex with HIV-1 Env immunogen BG505-SOSIPv4.1-GT1 containing the N276 gp120 glycan- Class 1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-03-25
Authors: Dam, K.A., Bjorkman, P.J.
PDB entry 7ugq: Cryo-EM structure of BG24 Fabs with an inferred germline CDRL1 and 10-1074 Fabs in complex with HIV-1 Env 6405-SOSIP.664
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-03-25
Authors: Dam, K.A., Bjorkman, P.J.
PDB entry 7ugr: Crystal structure of hyperfolder YFP
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2022-03-25
Authors: Campbell, B.C., Liu, C.F., Petsko, G.A.
PDB entry 7ugs: Crystal structure of monomeric hyperfolder YFP (K206V mutant)
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-03-25
Authors: Campbell, B.C., Liu, C.F., Petsko, G.A.
PDB entry 7ugt: Crystal structure of hyperfolder fluorescent protein FOLD6
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2022-03-25
Authors: Campbell, B.C., Liu, C.F., Petsko, G.A.
PDB entry 7ugu: Structure of enolase from streptococcus pyogenes
Classification: LYASE
Source organism: Streptococcus pyogenes
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-03-25
Authors: Tjia-Fleck, S., Readnour, B., Castellino, F.J.
PDB entry 7ugv: Asp-bound GltPh RSMR mutant in IFS-A2 state
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2022-03-25
Authors: Huang, Y., Boudker, O.
PDB entry 7ugw: M. tuberculosis DNA gyrase cleavage core bound to DNA and evybactin
Classification: ISOMERASE/ANTIBIOTIC/DNA
Source organism: Mycobacterium tuberculosis H37Rv; Photorhabdus noenieputensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-03-25
Authors: Hauk, G., Imai, Y., Lewis, K., Berger, J.M.
PDB entry 7ugx: Asp-bound GltPh RSMR mutant in IFS-B1 state
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2022-03-25
Authors: Huang, Y., Boudker, O.
PDB entry 7uh3: Asp-bound GltPh RSMR mutant in iOFS state
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2022-03-25
Authors: Huang, Y., Boudker, O.
PDB entry 7uh4: LXG-associated alpha-helical protein D2 (LapD2)
Classification: PROTEIN BINDING
Source organism: Streptococcus intermedius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-03-25
Authors: Klein, T.A., Grebenc, D.W., Shah, P.Y., McArthur, O.D., Surette, M.G., Kim, Y., Whitney, J.C.
PDB entry 7uh6: Asp-bound GltPh RSMR mutant in IFS-B2 state
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2022-03-25
Authors: Huang, Y., Boudker, O.
PDB entry 7uh8: Integrin alpha IIB beta3 complex with roxifiban (Mn/Ca)
Classification: CELL ADHESION/INHIBITOR
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75002 Å
Deposited: 2022-03-25
Authors: Lin, F.-Y., Zhu, J., Zhu, J., Springer, T.A.
PDB entry 7uh9: NMR structure of the cNTnC-cTnI chimera bound to W8
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-03-26
Authors: Cai, F., Kampourakis, T., Cockburn, K.T., Sykes, B.D.
PDB entry 7uha: NMR structure of the cNTnC-cTnI chimera bound to W6
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-03-26
Authors: Cai, F., Kampourakis, T., Cockburn, K.T., Sykes, B.D.
PDB entry 7uhb: SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-03-26
Authors: Park, Y.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 7uhc: SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-26
Authors: Park, Y.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 7uhe: Taf14 ET domain in complex with C-terminal tail of Taf2
Classification: TRANSCRIPTION
Source organism: Saccharomyces; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2022-03-26
Authors: Klein, B.J., Kutateladze, T.G.