LiteFold/PDB huggingface dataset:
PDB entry 7r4a: PARP15 catalytic domain in complex with OUL188
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-02-08
Authors: Murthy, S., Maksimainen, M.M., Lehtio, L.
PDB entry 7r4b: The Bacillus pumilus chorismate mutase
Classification: ISOMERASE
Source organism: Bacillus pumilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-02-08
Authors: Lund, B.A.
PDB entry 7r4c: Bovine complex I in the presence of IM1761092, deactive class v (Composite map)
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-02-08
Authors: Bridges, H.R., Blaza, J.N., Yin, Z., Chung, I., Hirst, J.
PDB entry 7r4d: Bovine complex I in the presence of IM1761092, deactive class vi (Composite map)
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-02-08
Authors: Bridges, H.R., Blaza, J.N., Yin, Z., Chung, I., Hirst, J.
PDB entry 7r4e: RVX-inhibited acetylcholinesterase in complex with 2-((hydroxyimino)methyl)-1-(5-(4-methyl-3-nitrobenzamido)pentyl)pyridinium
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.00001 Å
Deposited: 2022-02-08
Authors: Forsgren, N., Lindgren, C., Edvinsson, L., Linusson, A., Ekstrom, F.
PDB entry 7r4f: Bovine complex I in the presence of IM1761092, slack class i (Composite map)
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-02-08
Authors: Bridges, H.R., Blaza, J.N., Yin, Z., Chung, I., Hirst, J.
PDB entry 7r4g: Bovine complex I in the presence of IM1761092, slack class ii (Composite map)
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-02-08
Authors: Bridges, H.R., Blaza, J.N., Yin, Z., Chung, I., Hirst, J.
PDB entry 7r4h: phospho-STING binding to adaptor protein complex-1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.34 Å
Deposited: 2022-02-08
Authors: Xu, P., Ablasser, A.
PDB entry 7r4i: The SARS-CoV-2 spike in complex with the 2.15 neutralizing nanobody
Classification: VIRAL PROTEIN
Source organism: Camelus dromedarius; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-02-08
Authors: Casasnovas, J.M., Melero, R., Arranz, R., Fernandez, L.A.
PDB entry 7r4j: Crystal structure of human mitochondrial NAD kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2022-02-08
Authors: Labesse, G., Mary, C., Gelin, M., Lionne, C.
PDB entry 7r4k: Crystal structure of human mitochondrial NAD kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.33 Å
Deposited: 2022-02-08
Authors: Labesse, G., Mary, C., Gelin, M., Lionne, C.
PDB entry 7r4l: Crystal structure of human mitochondrial NAD kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-02-08
Authors: Labesse, G., Mary, C., Gelin, M., Lionne, C.
PDB entry 7r4m: Crystal structure of mitochondrial NAD kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-02-08
Authors: Labesse, G., Mary, C., Gelin, M., Lionne, C.
PDB entry 7r4n: Structure of human hydroxyacid oxidase 1 bound with 5-bromo-N-methyl-1H-indazole-3-carboxamide
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-02-08
Authors: Mackinnon, S., Bezerra, G.A., Krojer, T., Bradley, A.R., Talon, R., Brandeo-Neto, J., Douangamath, A., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Oppermann, U., Brennan, P.E., Yue, W.W.
PDB entry 7r4o: Structure of human hydroxyacid oxidase 1 bound with 2-((4H-1,2,4-triazol-3-yl)thio)-1-(4-(3-chlorophenyl)piperazin-1-yl)ethan-1-one
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-02-08
Authors: Mackinnon, S., Bezerra, G.A., Krojer, T., Bradley, A.R., Talon, R., Brandeo-Neto, J., Douangamath, A., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Oppermann, U., Brennan, P.E., Yue, W.W.
PDB entry 7r4p: Structure of human hydroxyacid oxidase 1 bound with 6-amino-1-benzyl-5-(methylamino)pyrimidine-2,4(1H,3H)-dione
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2022-02-09
Authors: Mackinnon, S., Bezerra, G.A., Krojer, T., Bradley, A.R., Talon, R., Brandeo-Neto, J., Douangamath, A., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Oppermann, U., Brennan, P.E., Yue, W.W.
PDB entry 7r4q: The SARS-CoV-2 spike in complex with the 1.29 neutralizing nanobody
Classification: VIRAL PROTEIN
Source organism: Camelus dromedarius; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-02-09
Authors: Casasnovas, J.M., Melero, R., Arranz, R., Fernandez, L.A.
PDB entry 7r4r: The SARS-CoV-2 spike in complex with the 1.10 neutralizing nanobody
Classification: VIRAL PROTEIN
Source organism: Camelus dromedarius; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-02-09
Authors: Casasnovas, J.M., Melero, R., Arranz, R., Fernandez, L.A.
PDB entry 7r4s: Crystal structure of PpSB1-LOV-I48T mutant (dark state)
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-02-09
Authors: Granzin, J., Batra-Safferling, R.
PDB entry 7r4t: In vitro assembled 266/297 - 391 tau filaments with NaHCO3 and NaCl (16a)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2022-02-09
Authors: Lovestam, S., Scheres, S.H.W.
PDB entry 7r4u: Apoform of FtrA/P19 from Rubrivivax gelatinosus
Classification: TRANSPORT PROTEIN
Source organism: Rubrivivax gelatinosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2022-02-09
Authors: Morera, S., Vigouroux, A., Plancqueel, S.
PDB entry 7r4v: Strep-tag FtrA-P19 from Rubrivivax gelatinosus in complex with an endogenous CU1
Classification: TRANSPORT PROTEIN
Source organism: Rubrivivax gelatinosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-02-09
Authors: Morera, S., Vigouroux, A.
PDB entry 7r4w: Single stranded DNA binding protein SSB M5 from Fervidobacterium gondwanense
Classification: DNA BINDING PROTEIN
Source organism: Fervidobacterium gondwanense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-02-09
Authors: Hakansson, M., Svensson, L.A., Werbowy, O., Al-Karadaghi, S., Kaczorowski, T., Kaczorowska, A.K., Dorawa, S.
PDB entry 7r4x: Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.15 Å
Deposited: 2022-02-09
Authors: Pellegrino, S., Dent, K.C., Spikes, T., Warren, A.J.
PDB entry 7r4z: Strep-tag FtrA-P19 from Rubrivivax gelatinosus in complex with iron and copper
Classification: TRANSPORT PROTEIN
Source organism: Rubrivivax gelatinosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-02-09
Authors: Morera, S., Vigouroux, A.
PDB entry 7r50: Crystal structure of GMP reductase from mycobacterium smegmatis in complex with GMP.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-02-09
Authors: Dolezal, M., Klima, M., Pichova, I.
PDB entry 7r51: Structure of P. gingivalis DPP11 in complex with the dipeptide Arg-Asp
Classification: HYDROLASE
Source organism: Porphyromonas gingivalis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.808 Å
Deposited: 2022-02-09
Authors: Tham, C.T., Coker, J.A., Foster, W.R., Ohara-Nemoto, Y., Nemoto, T.K., Yue, W.W., Bountra, C., Bezerra, G.A.
PDB entry 7r52: Crystal structure of human TLR8 in complex with Compound 2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.943 Å
Deposited: 2022-02-10
Authors: Faller, M., Zink, F.
PDB entry 7r53: Crystal structure of human TLR8 in complex with Compound 15
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.121 Å
Deposited: 2022-02-10
Authors: Faller, M., Zink, F.
PDB entry 7r54: Crystal structure of human TLR8 in complex with Compound 4
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.836 Å
Deposited: 2022-02-10
Authors: Faller, M., Zink, F.
PDB entry 7r55: B-trefoil lectin from Salpingoeca rosetta in complex with Gb3
Classification: SUGAR BINDING PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2022-02-10
Authors: Notova, S., Varrot, A.
PDB entry 7r56: Crystal structure of PpSB1-LOV-I48T mutant (light state)
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-02-10
Authors: Granzin, J., Batra-Safferling, R.
PDB entry 7r57: Escherichia coli type II Asparaginase N24S mutant in its apo form
Classification: ANTITUMOR PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-02-10
Authors: Maggi, M., Scotti, C.
PDB entry 7r58: Crystal structure of the GPVI-glenzocimab complex
Classification: BLOOD CLOTTING
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.902 Å
Deposited: 2022-02-10
Authors: Jandrot-Perrus, M., Lebozec, K., Rose, N., Welin, M., Billiald, P.
PDB entry 7r59: PARP2 catalytic domain in complex with OUL245
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-02-10
Authors: Galera-Prat, A., Maksimainen, M.M., Lehtio, L.
PDB entry 7r5a: Vibrio cholera ParD2:ParE2 antitoxin:toxin complex
Classification: TOXIN
Source organism: Vibrio cholerae O1 biovar El Tor str. N16961
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2022-02-10
Authors: Garcia-Rodriguez, G., Loris, R.
PDB entry 7r5b: Crystal structure of BRD4(1) in complex with the inhibitor MPM2
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2022-02-10
Authors: Huegle, M.
PDB entry 7r5c: Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-29 (G206C, R207S, D210L, S211V)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-02-10
Authors: Barciszewski, J., Imiolczyk, B., Loch, J.I., Jaskolski, M.
PDB entry 7r5d: PARP15 catalytic domain in complex with OUL234
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-02-10
Authors: Maksimainen, M.M., Lehtio, L.
PDB entry 7r5e: FtrA-P19 from Rubrivivax gelatinosus in complex with copper and magnesium (X1)
Classification: TRANSPORT PROTEIN
Source organism: Rubrivivax gelatinosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-02-10
Authors: Morera, S., Vigouroux, A.
PDB entry 7r5f: Crystal structure of YTHDF2 with compound YLI_DF_012
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-02-10
Authors: Nai, F., Li, Y., Caflisch, A.
PDB entry 7r5g: FtrA-P19 from Rubrivivax gelatinosus in complex with copper and magnesium (X2)
Classification: TRANSPORT PROTEIN
Source organism: Rubrivivax gelatinosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-02-10
Authors: Morera, S., Vigouroux, A.
PDB entry 7r5h: In vitro assembled 266/297 - 391 tau filaments with KCl (10b)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2022-02-10
Authors: Lovestam, S., Scheres, S.H.W.
PDB entry 7r5i: High resolution Crystal structure of ExsFA, a Bacillus cereus spore exosporium protein
Classification: STRUCTURAL PROTEIN
Source organism: Bacillus cereus; unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2022-02-10
Authors: Brear, P., Schack, S., Christie, G.
PDB entry 7r5j: Human nuclear pore complex (dilated)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 50 Å
Deposited: 2022-02-10
Authors: Mosalaganti, S., Obarska-Kosinska, A., Siggel, M., Taniguchi, R., Turonova, B., Zimmerli, C.E., Buczak, K., Schmidt, F.H., Margiotta, E., Mackmull, M.T., Hagen, W.J.H., Hummer, G., Kosinski, J., Beck, M.
PDB entry 7r5k: Human nuclear pore complex (constricted)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 12 Å
Deposited: 2022-02-10
Authors: Mosalaganti, S., Obarska-Kosinska, A., Siggel, M., Taniguchi, R., Turonova, B., Zimmerli, C.E., Buczak, K., Schmidt, F.H., Margiotta, E., Mackmull, M.T., Hagen, W.J.H., Hummer, G., Kosinski, J., Beck, M.
PDB entry 7r5l: Crystal structure of YTHDF2 with compound YLI_DC1_015
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-02-10
Authors: Nachawati, R., Nai, F., Li, Y., Caflisch, A.
PDB entry 7r5m: Core-binding domain of fungal E3-binding domain bound to the pyruvate dehydrogenase E2 core
Classification: TRANSFERASE
Source organism: Neurospora crassa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-02-11
Authors: Forsberg, B.O.
PDB entry 7r5n: Crystal structure of the full-length short LOV protein PF5-LOV from Pseudomonas fluorescens (dark state)
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2022-02-11
Authors: Arinkin, V., Batra-Safferling, R., Granzin, J.
PDB entry 7r5o: 1.58 A STRUCTURE OF HUMAN APOFERRITIN OBTAINED FROM TITAN KRIOS 2 AT eBIC, DLS UNDER COMMISSIONING SESSION CM26464-2
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.58 Å
Deposited: 2022-02-11
Authors: Clare, D.K.
PDB entry 7r5p: Strep-tag FtrA-P19 from Rubrivivax gelatinosus in complex with copper and magnesium
Classification: TRANSPORT PROTEIN
Source organism: Rubrivivax gelatinosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2022-02-11
Authors: Morera, S., Vigouroux, A.
PDB entry 7r5q: Escherichia coli type II Asparaginase N24S mutant in complex with GLU
Classification: ANTITUMOR PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-02-11
Authors: Maggi, M., Scotti, C.
PDB entry 7r5r: Structure of the human CCAN CENP-A alpha-satellite complex
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.44 Å
Deposited: 2022-02-11
Authors: Yatskevich, S., Muir, K.W., Bellini, D., Zhang, Z., Yang, J., Tischer, T., Predin, M., Dendooven, T., McLaughlin, S.H., Barford, D.
PDB entry 7r5s: Structure of the human CCAN bound to alpha satellite DNA
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2022-02-11
Authors: Yatskevich, S., Muir, K.W., Bellini, D., Zhang, Z., Yang, J., Tischer, T., Predin, M., Dendooven, T., McLaughlin, S.H., Barford, D.
PDB entry 7r5t: CRYSTAL STRUCTURE OF E.coli ALCOHOL DEHYDROGENASE - FucO MUTANT F254I COMPLEXED WITH FE, NADH, AND GLYCEROL
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli str. K-12 substr. MG1655
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-02-11
Authors: Sridhar, S., Kiema, T.R., Wierenga, R., Widersten, M.
PDB entry 7r5v: Structure of the human CCAN CENP-A alpha-satellite complex
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.55 Å
Deposited: 2022-02-11
Authors: Yatskevich, S., Muir, K.W., Bellini, D., Zhang, Z., Yang, J., Tischer, T., Predin, M., Dendooven, T., McLaughlin, S.H., Barford, D.
PDB entry 7r5w: Crystal structure of YTHDF2 with compound YLI_DF_029
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-02-11
Authors: Nai, F., Li, Y., Caflisch, A.
PDB entry 7r5x: Tankyrase 2 in complex with an inhibitor (OUL211)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.052 Å
Deposited: 2022-02-11
Authors: Sowa, S.T., Lehtio, L.
PDB entry 7r5y: Crystal Structure of Prevotella sp. CAG:617 Multiple Inositol Polyphosphate Phosphatase, complex with myo-inositol hexakissulfate
Classification: HYDROLASE
Source organism: Prevotella sp. CAG:617
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-02-12
Authors: Acquistapace, I.M., Brearley, C.A., Hemmings, A.M.
PDB entry 7r5z: Monocot chimeric jacalin JAC1 from Oryza sativa: dirigent domain (crystal form 1)
Classification: PLANT PROTEIN
Source organism: Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-02-12
Authors: Huwa, N., Classen, T., Weiergraeber, O.H.
PDB entry 7r60: BTK in complex with 18A
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2021-06-22
Authors: Gardberg, A.
PDB entry 7r61: BTK in complex with 25A
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2021-06-22
Authors: Gardberg, A.
PDB entry 7r62: Estrogen Receptor Alpha Ligand Binding Domain in Complex with a Desmethyl ICI164,384 Derivative
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-06-22
Authors: Diennet, M., El Ezzy, M., Thiombane, K., Cotnoir-White, D., Poupart, J., Gao, Z., Mendoza Sanchez, R., Marinier, A., Gleason, J., Greene, G.L., Mader, S.C., Fanning, S.W.
PDB entry 7r63: Nb82, a nanobody against voltage gated sodium channels Nav1.4 and Nav1.5
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-22
Authors: Srinivasan, L., Gabelli, S.B.
PDB entry 7r65: Crystal structure of a bacterial cyclic UMP synthase from Burkholderia cepacia LK29
Classification: TRANSFERASE
Source organism: Burkholderia cepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-06-22
Authors: Morehouse, B.R., Kranzusch, P.J.
PDB entry 7r66: Structure of Pfp1 protease from Thermococcus thioreducens: large unit cell at 1.44 A resolution
Classification: HYDROLASE
Source organism: Thermococcus thioreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2021-06-22
Authors: McPherson, A.
PDB entry 7r67: Human obscurin Ig13
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-06-22
Authors: Moncure, G.E., Wright, N.T.
PDB entry 7r68: Human obscurin Ig12
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-06-22
Authors: Mauriello, G.E., Wright, N.T.
PDB entry 7r69: Crystal structure of mutant R43D/C273S of L-Asparaginase I from Yersinia pestis
Classification: HYDROLASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-06-22
Authors: Strzelczyk, P., Wlodawer, A., Lubkowski, J.
PDB entry 7r6a: Crystal structure of mutant L124D/R125A/C273S of L-Asparaginase I from Yersinia pestis
Classification: HYDROLASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2021-06-22
Authors: Strzelczyk, P., Wlodawer, A., Lubkowski, J.
PDB entry 7r6b: Crystal structure of mutant R43D/L124D/R125A/C273S of L-Asparaginase I from Yersinia pestis
Classification: HYDROLASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2021-06-22
Authors: Strzelczyk, P., Wlodawer, A., Lubkowski, J.
PDB entry 7r6g: Crystal structure of DfrA5 dihydrofolate reductase in complex with TRIMETHOPRIM and NADPH
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2021-06-22
Authors: Estrada, A., Wright, D., Krucinska, J., Erlandsen, H.
PDB entry 7r6h: RHCC in complex with o-carborane
Classification: TRANSPORT PROTEIN
Source organism: Staphylothermus marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-06-22
Authors: Heide, F., McDougall, M., Stetefeld, J.
PDB entry 7r6j: Co-crystal structure of Chaetomium glucosidase with compound 1
Classification: HYDROLASE/INHIBITOR
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.905 Å
Deposited: 2021-06-22
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 7r6k: State E2 nucleolar 60S ribosomal intermediate - Model for Noc2/Noc3 region
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae BY4741
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2021-06-22
Authors: Cruz, V.E., Sekulski, K., Peddada, N., Erzberger, J.P.
PDB entry 7r6l: 5 prime exon-free pre-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2021-06-22
Authors: Thelot, F., Liu, D., Liao, M., Yin, P.
PDB entry 7r6m: Post-2S intermediate of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic dimeric construct
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2021-06-22
Authors: Thelot, F., Liu, D., Liao, M., Yin, P.
PDB entry 7r6n: Exon-free state of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic trimeric construct
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-06-22
Authors: Thelot, F., Liu, D., Liao, M., Yin, P.
PDB entry 7r6o: Pyrrolysyl-tRNA synthetase from methanogenic archaeon ISO4-G1 (G1PylRS)
Classification: TRANSLATION
Source organism: methanogenic archaeon mixed culture ISO4-G1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-06-23
Authors: Frkic, R.L., Huber, T., Jackson, C.J.
PDB entry 7r6p: Solution structure of peptide toxin MIITX2-Mg1a from the venom of the Australian giant red bull ant Myrmecia gulosa
Classification: TOXIN
Source organism: Myrmecia gulosa
Experimental method: SOLUTION NMR
Deposited: 2021-06-23
Authors: Chin, Y.K., Eagle, D., Bankala, K., Robinson, S.D.
PDB entry 7r6q: State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region model
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae BY4741
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2021-06-23
Authors: Cruz, V.E., Sekulski, K., Peddada, N., Erzberger, J.P.
PDB entry 7r6r: Crystal Structure of a Mycobacteriophage Cluster A2 Immunity Repressor:DNA Complex
Classification: GENE REGULATION/DNA
Source organism: Mycobacterium phage TipsytheTRex; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.13 Å
Deposited: 2021-06-23
Authors: McGinnis, R.J., Brambley, C.A., Stamey, B., Green, W.C., Gragg, K.N., Cafferty, E.R., Terwilliger, T.C., Hammel, M., Hollis, T.J., Miller, J.M., Gainey, M.D., Wallen, J.R.
PDB entry 7r6s: Crystal Structure of the Putative Bacteriophage Protein from Stenotrophomonas maltophilia
Classification: UNKNOWN FUNCTION
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-06-23
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Brunzelle, J.S., Wiersum, G., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 7r6t: Human EXOG complexed with dRP-containing DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-06-23
Authors: Szymanski, M.R., Yin, Y.W.
PDB entry 7r6u: Paracoccidioides americana Pb03 Calcium Binding Protein 1 (Cbp1)
Classification: TOXIN
Source organism: Paracoccidioides brasiliensis (strain Pb03)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-06-23
Authors: Herrera, N., Azimova, D., Sil, A., Rosenberg, O.S.
PDB entry 7r6v: Human EXOG complexed with dRP-containing DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2021-06-23
Authors: Szymanski, M.R., Yin, Y.W.
PDB entry 7r6w: SARS-CoV-2 spike receptor-binding domain (RBD) in complex with S2X35 Fab and S309 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2021-06-23
Authors: Snell, G., Czudnochowski, N., Hernandez, P., Nix, J.C., Croll, T.I., Corti, D., Cameroni, E., Pinto, D., Beltramello, M.
PDB entry 7r6x: SARS-CoV-2 spike receptor-binding domain (RBD) in complex with S2E12 Fab, S309 Fab, and S304 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2021-06-23
Authors: Snell, G., Czudnochowski, N., Croll, T.I., Nix, J.C., Corti, D., Cameroni, E., Pinto, D., Beltramello, M.
PDB entry 7r6y: E117K mutant pyruvate kinase from rabbit muscle
Classification: TRANSFERASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-06-24
Authors: Rodriguez-Romero, A., Rodriguez-Hernandez, A.
PDB entry 7r6z: OXA-48 bound by Compound 3.3
Classification: HYDROLASE/INHIBITOR
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-06-24
Authors: Taylor, D.M., Hu, L., Prasad, B.V.V., Sankaran, B., Palzkill, T.
PDB entry 7r70: Crystal Structure of the UbArk2C fusion protein
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.499 Å
Deposited: 2021-06-24
Authors: Paluda, A., Middleton, A.J., Mace, P.D., Day, C.L.
PDB entry 7r71: Crystal Structure of the UbArk2C-UbcH5b~Ub complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-06-24
Authors: Paluda, A., Middleton, A.J., Mace, P.D., Day, C.L.
PDB entry 7r72: State E1 nucleolar 60S ribosome biogenesis intermediate - Spb4 local model
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae BY4741
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2021-06-24
Authors: Cruz, V.E., Sekulski, K., Peddada, N., Erzberger, J.P.
PDB entry 7r73: Crystal structure of llama VHH antibody D7 in complex with HIV-1 gp120 core
Classification: IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2021-06-24
Authors: Zhou, T., Kwong, P.D.
PDB entry 7r74: Crystal structure of llama VHH antibody in complex with HIV-1 HXBC2 gp120 core
Classification: IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2021-06-24
Authors: Zhou, T., Kwong, P.D.
PDB entry 7r75: Structure of human SHP2 in complex with compound 16
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2021-06-24
Authors: Leonard, P.G., Cross, J.
PDB entry 7r76: Cryo-EM structure of DNMT5 in apo state
Classification: TRANSFERASE
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-06-24
Authors: Wang, J., Patel, D.J.
PDB entry 7r77: Cryo-EM structure of DNMT5 binary complex with hemimethylated DNA
Classification: TRANSFERASE/DNA
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-06-24
Authors: Wang, J., Patel, D.J.
PDB entry 7r78: cryo-EM structure of DNMT5 quaternary complex with hemimethylated DNA, AMP-PNP and SAH
Classification: TRANSFERASE/DNA
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-06-24
Authors: Wang, J., Patel, D.J.
PDB entry 7r79: Histoplasma capsulatum H88 Calcium Binding Protein 1 (Cbp1)
Classification: TOXIN
Source organism: Ajellomyces capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-06-24
Authors: Herrera, N., Azimova, D., Sil, A., Rosenberg, O.S.
PDB entry 7r7a: State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae BY4741
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2021-06-24
Authors: Cruz, V.E., Sekulski, K., Peddada, N., Erzberger, J.P.
PDB entry 7r7b: 1.50 Angstroem Crystal Structure of FeoA from Bacteroides fragilis
Classification: METAL TRANSPORT
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-06-24
Authors: Sestok, A.E., Smith, A.T.
PDB entry 7r7c: State E2 nucleolar 60S ribosomal biogenesis intermediate - L1 stalk local model
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae BY4741
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2021-06-24
Authors: Cruz, V.E., Sekulski, K., Peddada, N., Erzberger, J.P.
PDB entry 7r7d: Structure of human SHP2 in complex with compound 22
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-06-24
Authors: Leonard, P.G., Cross, J.
PDB entry 7r7e: Synechococcus Olefin Synthase FAAL domain in complex with AMP and pyrophosphate
Classification: LIGASE
Source organism: Synechococcus sp. PCC 7002
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-06-24
Authors: Sikkema, A.P., Strugis, R.M., Smith, J.L.
PDB entry 7r7f: Synechococcus Olefin Synthase FAAL domain R336A in complex with stearoyl adenylate and pyrophosphate
Classification: LIGASE
Source organism: Synechococcus sp. PCC 7002
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2021-06-24
Authors: Sikkema, A.P., Strugis, R.M., Smith, J.L.
PDB entry 7r7g: Synechococcus Olefin Synthase FAAL domain A229I/R336A in complex with palmitoyl adenylate and pyrophosphate
Classification: LIGASE
Source organism: Synechococcus sp. PCC 7002
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-06-24
Authors: Sikkema, A.P., Strugis, R.M., Smith, J.L.
PDB entry 7r7h: Peptidomimetic nitrile warheads as SARS-CoV-2 3CL protease inhibitors
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-06-24
Authors: Khan, M.B., Lu, J., Young, H.S., Lemieux, M.J.
PDB entry 7r7i: Structure of human SHP2 in complex with compound 27
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-06-24
Authors: Leonard, P.G., Cross, J.
PDB entry 7r7j: Crystal structure of RadD with ADP
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2021-06-24
Authors: Osorio Garcia, M.A., Satyshur, K.A., Keck, J.L., Cox, M.M.
PDB entry 7r7k: Structure of Human Anaplastic Lymphoma Kinase Domain in complex with (4-[6-amino-5-[(1~{R})-1-[5-fluoro-2-(triazol-2-yl)phenyl]ethoxy]-3-pyridyl]isoindolin-1-one)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.831 Å
Deposited: 2021-06-24
Authors: McTigue, M.
PDB entry 7r7l: Structure of human SHP2 in complex with compound 30
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-06-24
Authors: Leonard, P.G., Cross, J.
PDB entry 7r7m: Crystal structure of Triosephosphate isomerase from Candidate division Katanobacteria (WWE3) bacterium
Classification: ISOMERASE
Source organism: candidate division WWE3 bacterium RAAC2_WWE3_1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-24
Authors: Vickers, C.J., Patrick, W.M., Fraga, D.
PDB entry 7r7n: SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment (local refinement of the RBD and S2D106)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2021-06-25
Authors: Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7r7o: Structure of methyltransferase domain of Spb1 boudn to SAM
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2021-06-25
Authors: Cruz, V.E., Sekulski, K., Peddada, N., Erzberger, J.P.
PDB entry 7r7p: Immature HIV-1 CACTD-SP1 lattice with Bevirimat (BVM) and Inositol hexakisphosphate (IP6)
Classification: PROTEIN BINDING
Source organism: Human immunodeficiency virus 1
Experimental method: SOLID-STATE NMR
Deposited: 2021-06-25
Authors: Sarkar, S., Zadrozny, K.K., Zadorozhnyi, R., Russell, R.W., Quinn, C.M., Kleinpeter, A., Ablan, S., Meshkin, H., Perilla, J.R., Ganser-Pornillos, B.K., Pornillos, O., Freed, E.O., Gronenborn, A.M., Polenova, T.
PDB entry 7r7q: Immature HIV-1 CACTD-SP1 lattice with Inositol hexakisphosphate (IP6)
Classification: PROTEIN BINDING
Source organism: Human immunodeficiency virus 1
Experimental method: SOLID-STATE NMR
Deposited: 2021-06-25
Authors: Sarkar, S., Zadrozny, K.K., Zadorozhnyi, R., Russell, R.W., Quinn, C.M., Kleinpeter, A., Ablan, S., Meshkin, H., Perilla, J.R., Ganser-Pornillos, B.K., Pornillos, O., Freed, E.O., Gronenborn, A.M., Polenova, T.
PDB entry 7r7r: Structure of Human Anaplastic Lymphoma Kinase Domain in complex with ((2~{R})-2-[5-[6-amino-5-[(1~{R})-1-[5-fluoro-2-(triazol-2-yl)phenyl]ethoxy]-3-pyridyl]-4-methyl-thiazol-2-yl]propane-1,2-diol)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.935 Å
Deposited: 2021-06-25
Authors: McTigue, M.
PDB entry 7r7s: p47-bound p97-R155H mutant with ATPgammaS
Classification: HYDROLASE/Lipid Binding Protein
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.23 Å
Deposited: 2021-06-25
Authors: Nandi, P., Li, S., Coulmbres, R.C.A., Wang, F., Williams, D.R., Malyutin, A.G., Poh, Y.-P., Chou, T.-F., Chiu, P.-L.
PDB entry 7r7t: p47-bound p97-R155H mutant with ADP
Classification: HYDROLASE/Lipid Binding Protein
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2021-06-25
Authors: Nandi, P., Li, S., Coulmbres, R.C.A., Wang, F., Williams, D.R., Malyutin, A.G., Poh, Y.-P., Chou, T.-F., Chiu, P.-L.
PDB entry 7r7u: D1 and D2 domain structure of the p97(R155H)-p47 complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-06-25
Authors: Nandi, P., Li, S., Coulmbres, R.C.A., Wang, F., Williams, D.R., Poh, Y.-P., Chou, T.-F., Chiu, P.-L.
PDB entry 7r7v: Crystal structure of HLA-B*5301 complex with an HIV-1 Gag-derived epitope QW9
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-06-25
Authors: Li, X.L., Tan, K.M., Walker, B.D., Wang, J.H.
PDB entry 7r7w: Crystal structure of HLA-B*5301 complex with an HIV-1 Gag-derived epitope QW9 S3T variant
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2021-06-25
Authors: Li, X.L., Tan, K.M., Walker, B.D., Wang, J.H.
PDB entry 7r7x: Crystal structure of HLA-B*5701 complex with an HIV-1 Gag-derived epitope QW9
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.099 Å
Deposited: 2021-06-25
Authors: Li, X.L., Tan, K.M., Walker, B.D., Wang, J.H.
PDB entry 7r7y: Crystal structure of HLA-B*5701 complex with an HIV-1 Gag-derived epitope QW9 S3T variant
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.601 Å
Deposited: 2021-06-25
Authors: Li, X.L., Ng, R., Tan, K.M., Walker, B.D., Wang, J.H.
PDB entry 7r7z: Crystal structure of QW9-HLA-B*5301 specific T Cell Receptor, C3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.286 Å
Deposited: 2021-06-25
Authors: Li, X.L., Tan, K.M., Xu, S.T., Ng, R., Walker, B.D., Wang, J.H.
PDB entry 7r80: Crystal structure of C3 TCR complex with QW9-bound HLA-B*5301
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-06-25
Authors: Li, X.L., Tan, K.M., Walker, B.D., Wang, J.H.
PDB entry 7r81: Structure of the translating Neurospora crassa ribosome arrested by cycloheximide
Classification: TRANSLATION
Source organism: Neurospora crassa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-06-25
Authors: Shen, L., Su, Z., Yang, K., Wu, C., Becker, T., Bell-Pedersen, D., Zhang, J., Sachs, M.S.
PDB entry 7r84: Structure of mouse BAI1 (ADGRB1) TSR3 domain in P21 space group
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.336 Å
Deposited: 2021-06-26
Authors: Miao, Y., Jude, K.M., Garcia, K.C.
PDB entry 7r85: Structure of mouse Bai1 (ADGRB1) TSR3 domain
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-06-26
Authors: Miao, Y., Jude, K.M., Garcia, K.C.
PDB entry 7r86: Structure of mouse BAI1 (ADGRB1) in complex with mouse Nogo receptor (RTN4R)
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-06-26
Authors: Miao, Y., Jude, K.M., Garcia, K.C.
PDB entry 7r87: The structure of human ABCG5-WT/ABCG8-I419E
Classification: LIPID TRANSPORT/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-06-26
Authors: Sun, Y., Li, X., Long, T.
PDB entry 7r88: The structure of human ABCG5-I529W/ABCG8-WT
Classification: LIPID TRANSPORT/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-06-26
Authors: Sun, Y., Li, X., Long, T.
PDB entry 7r89: The structure of human ABCG5/ABCG8 purified from yeast
Classification: LIPID TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-06-26
Authors: Sun, Y., Li, X., Long, T.
PDB entry 7r8a: The structure of human ABCG5/ABCG8 purified from mammalian cells
Classification: LIPID TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-06-26
Authors: Sun, Y., Li, X., Long, T.
PDB entry 7r8b: The structure of human ABCG5/ABCG8 supplemented with cholesterol
Classification: LIPID TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-06-26
Authors: Sun, Y., Li, X., Long, T.
PDB entry 7r8c: The structure of human ABCG1
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-06-26
Authors: Sun, Y., Li, X., Long, T.
PDB entry 7r8d: The structure of human ABCG1 E242Q with cholesterol
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-06-26
Authors: Sun, Y., Li, X., Long, T.
PDB entry 7r8e: The structure of human ABCG1 E242Q complexed with ATP
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-06-26
Authors: Sun, Y., Li, X., Long, T.
PDB entry 7r8f: Crystal structure of Pseudooceanicola lipolyticus Argonaute
Classification: HYDROLASE
Source organism: Pseudooceanicola lipolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2021-06-26
Authors: Shin, Y., Murakami, K.S.
PDB entry 7r8g: Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' OH guide DNA
Classification: HYDROLASE/DNA
Source organism: Pseudooceanicola lipolyticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-06-26
Authors: Shin, Y., Murakami, K.S.
PDB entry 7r8h: Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' p guide DNA
Classification: HYDROLASE/DNA
Source organism: Pseudooceanicola lipolyticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2021-06-26
Authors: Shin, Y., Murakami, K.S.
PDB entry 7r8i: Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' OH guide DNA in the presence of Mg2+
Classification: HYDROLASE/DNA
Source organism: Pseudooceanicola lipolyticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-06-26
Authors: Shin, Y., Murakami, K.S.
PDB entry 7r8j: Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' p guide DNA in the presence of Mg2+
Classification: HYDROLASE/DNA
Source organism: Pseudooceanicola lipolyticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-06-26
Authors: Shin, Y., Murakami, K.S.
PDB entry 7r8k: Crystal structure of Pseudooceanicola lipolyticus Argonaute (SeMet labeled protein)
Classification: HYDROLASE
Source organism: Pseudooceanicola lipolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2021-06-26
Authors: Shin, Y., Murakami, K.S.
PDB entry 7r8l: Structure of the SARS-CoV-2 RBD in complex with neutralizing antibody C099 and CR3022
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-06-26
Authors: Barnes, C.O., Bjorkman, P.J.
PDB entry 7r8m: Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C032
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-06-26
Authors: DeLaitsch, A.T., Barnes, C.O., Bjorkman, P.J.
PDB entry 7r8n: Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C051
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2021-06-26
Authors: Barnes, C.O., Bjorkman, P.J.
PDB entry 7r8o: Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C548
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-06-26
Authors: DeLaitsch, A.T., Barnes, C.O., Bjorkman, P.J.
PDB entry 7r8p: Open form of SAOUHSC_02373 in complex with ADP, Mg2+ and Na+
Classification: LIGASE
Source organism: Staphylococcus aureus (strain NCTC 8325 / PS 47)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2021-06-27
Authors: Pederick, J.L., Bruning, J.B.
PDB entry 7r8q: Closed form of SAOUHSC_02373 in complex with ADP, citrate, Mg2+ and Na+
Classification: LIGASE
Source organism: Staphylococcus aureus (strain NCTC 8325 / PS 47)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-27
Authors: Pederick, J.L., Bruning, J.B.
PDB entry 7r8r: Physachenolide C with Bromodomain (BRD3-BD1)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-06-27
Authors: Fromme, R., Sivinski, J., Zerio, C., Gunatilaka, A.A.L., Chapman, E.
PDB entry 7r8s: The crystal structure of CYP199A4 bound to 4-n-propylbenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris (strain HaA2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.366 Å
Deposited: 2021-06-27
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 7r8t: High-resolution crystal structure of CYP199A4 bound to 4-ethylbenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris (strain HaA2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.366 Å
Deposited: 2021-06-27
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 7r8u: LOX-1 - Structural and Functional Studies of a Receptor Implicated in Atherosclerosis
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2021-06-27
Authors: Oganesyan, V., van Dyk, N.
PDB entry 7r8v: Cryo-EM structure of the ADP state actin filament
Classification: CELL ADHESION
Source organism: Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2021-06-27
Authors: Gong, R., Espinosa de los Reyes, S., Reynolds, M.J., Gurel, P., Alushin, G.M.
PDB entry 7r8w: Crystal Structure of the LNK SH2 Domain in Complex with a JAK2 pY813 Phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-06-27
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 7r8x: Crystal Structure of the LNK SH2 Domain in Complex with an EPOR pY454 Phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-06-27
Authors: Morris, R., Kershaw, N.J., Babon, J.J.
PDB entry 7r8y: Ancestral protein AncThEn of Phosphomethylpyrimidine kinases family
Classification: TRANSFERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-06-27
Authors: Munoz, S., Maturana, P., Gonzalez-Ordenes, F., Cea, P., Castro-Fernandez, V.
PDB entry 7r8z: Ancestral protein AncEn of Phosphomethylpyrimidine kinases family
Classification: TRANSFERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-06-27
Authors: Munoz, S., Fuentes-Ugarte, N., Maturana, P., Gonzalez-Ordenes, F., Cea, P., Castro-Fernandez, V.