LiteFold/PDB huggingface dataset:
PDB entry 3ewz: human orotidyl-5'-monophosphate decarboxylase in complex with 5-cyano-UMP
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-10-16
Authors: Heinrich, D., Diederichsen, U., Rudolph, M.
PDB entry 3ex1: human orotidyl-5'-monophosphate decarboxylase soaked with 6-cyano-UMP, converted to UMP
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-10-16
Authors: Heinrich, D., Diederichsen, U., Rudolph, M.
PDB entry 3ex2: human orotidyl-5'-monophosphate decarboxylase in complex with 6-cyano-UMP
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-10-16
Authors: Heinrich, D., Diederichsen, U., Rudolph, M.
PDB entry 3ex3: human orotidyl-5'-monophosphate decarboxylase in complex with 6-azido-UMP, covalent adduct
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-10-16
Authors: Heinrich, D., Diederichsen, U., Rudolph, M.
PDB entry 3ex4: human orotidyl-5'-monophosphate decarboxylase in complex with BMP
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2008-10-16
Authors: Heinrich, D., Diederichsen, U., Rudolph, M.
PDB entry 3ex6: D312N mutant of human orotidyl-5'-monophosphate decarboxylase in complex with 6-azido-UMP, covalent adduct
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-10-16
Authors: Heinrich, D., Diederichsen, U., Rudolph, M.
PDB entry 3ex7: The crystal structure of EJC in its transition state
Classification: hydrolase/RNA binding protein/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2008-10-16
Authors: Andersen, G.R., Nielsen, K.H.
PDB entry 3ex8: Complex structure of bacillus subtilis RibG reduction mechanism in riboflavin biosynthesis
Classification: HYDROLASE, OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2008-10-16
Authors: Chen, S.C., Lin, Y.H., Yu, H.C., Liaw, S.H.
PDB entry 3ex9: Crystal structure of PhzA/B from Burkholderia cepacia R18194 crystallized in C2221
Classification: BIOSYNTHETIC PROTEIN
Source organism: Burkholderia sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-10-16
Authors: Ahuja, E.G., Blankenfeldt, W.
PDB entry 3exa: Crystal structure of the full-length tRNA isopentenylpyrophosphate transferase (BH2366) from Bacillus halodurans, Northeast Structural Genomics Consortium target BhR41.
Classification: TRANSFERASE
Source organism: Bacillus halodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-10-16
Authors: Forouhar, F., Abashidze, M., Neely, H., Seetharaman, J., Shastry, R., Janjua, H., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3exb: Crystal structure of Cytochrome C Peroxidase with a Proposed Electron Pathway Excised in a Complex with a Peptide Wire
Classification: OXIDOREDUCTASE/PEPTIDE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-10-16
Authors: Putnam, A.-M.A., Lee, Y.-T., Goodin, D.B.
PDB entry 3exc: Structure of the RNA'se SSO8090 from Sulfolobus solfataricus
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-10-16
Authors: Singer, A.U., Skarina, T., Tan, K., Kagan, O., Onopriyenko, O., Edwards, A.M., Joachimiak, A., Yakunin, A.F., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3exd: Sulfur-SAD phased HEWL Crystal
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2008-10-16
Authors: Nascimento, A.S., Liberato, M.V., Polikarpov, I.
PDB entry 3exe: Crystal structure of the pyruvate dehydrogenase (E1p) component of human pyruvate dehydrogenase complex
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.979 Å
Deposited: 2008-10-16
Authors: Kato, M., Wynn, R.M., Chuang, J.L., Tso, S.-C., Machius, M., Li, J., Chuang, D.T.
PDB entry 3exf: Crystal structure of the pyruvate dehydrogenase (E1p) component of human pyruvate dehydrogenase complex
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.998 Å
Deposited: 2008-10-16
Authors: Kato, M., Wynn, R.M., Chuang, J.L., Tso, S.-C., Machius, M., Li, J., Chuang, D.T.
PDB entry 3exg: Crystal structure of the pyruvate dehydrogenase (E1p) component of human pyruvate dehydrogenase complex
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.011 Å
Deposited: 2008-10-16
Authors: Kato, M., Wynn, R.M., Chuang, J.L., Tso, S.-C., Machius, M., Li, J., Chuang, D.T.
PDB entry 3exh: Crystal structure of the pyruvate dehydrogenase (E1p) component of human pyruvate dehydrogenase complex
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.444 Å
Deposited: 2008-10-16
Authors: Kato, M., Wynn, R.M., Chuang, J.L., Tso, S.-C., Machius, M., Li, J., Chuang, D.T.
PDB entry 3exi: Crystal structure of the pyruvate dehydrogenase (E1p) component of human pyruvate dehydrogenase complex with the subunit-binding domain (SBD) of E2p, but SBD cannot be modeled into the electron density
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-10-16
Authors: Kato, M., Wynn, R.M., Chuang, J.L., Tso, S.-C., Machius, M., Li, J., Chuang, D.T.
PDB entry 3exj: Crystal Structure of a p53 Core Tetramer Bound to DNA
Classification: TRANSCRIPTION/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-16
Authors: Malecka, K.A.
PDB entry 3exl: Crystal Structure of a p53 Core Tetramer Bound to DNA
Classification: TRANSCRIPTION/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-10-16
Authors: Malecka, K.A.
PDB entry 3exm: Crystal structure of the phosphatase SC4828 with the non-hydrolyzable nucleotide GPCP
Classification: HYDROLASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-10-16
Authors: Singer, A.U., Xu, X., Zheng, H., Joachimiak, A., Edwards, A.M., Savchenko, A., Yakunin, A.F., Midwest Center for Structural Genomics (MCSG)
PDB entry 3exn: Crystal structure of acetyltransferase from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-10-16
Authors: Nocek, B., Hatzos, C., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3exo: Crystal structure of BACE1 bound to inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-10-16
Authors: Allison, T.J.
PDB entry 3exq: Crystal structure of a NUDIX family hydrolase from Lactobacillus brevis
Classification: HYDROLASE
Source organism: Lactobacillus brevis ATCC 367
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-16
Authors: Palani, K., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3exr: Crystal structure of KGPDC from Streptococcus mutans
Classification: LYASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-10-16
Authors: Li, G.L., Liu, X., Li, L.F., Su, X.D.
PDB entry 3exs: Crystal structure of KGPDC from Streptococcus mutans in complex with D-R5P
Classification: LYASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-10-17
Authors: Li, G.L., Liu, X., Wang, K.T., Li, L.F., Su, X.D.
PDB entry 3ext: Crystal structure of KGPDC from Streptococcus mutans
Classification: LYASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-17
Authors: Liu, X., Li, G.L., Li, L.F., Su, X.D.
PDB entry 3exu: A glycoside hydrolase family 11 xylanase with an extended thumb region
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2008-10-17
Authors: Vandermarliere, E., Pollet, A., Strelkov, S.V., Delcour, J.A., Courtin, C.M.
PDB entry 3exv: Crystal structure of the human Adenovirus type 11 fiber knob
Classification: VIRAL PROTEIN
Source organism: Human adenovirus B
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-10-17
Authors: Persson, B.D., Reiter, D.M., Arnberg, N., Stehle, T.
PDB entry 3exw: Crystal structure of the human Adenovirus type 7 fiber knob
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-10-17
Authors: Persson, B.D., Reiter, D.M., Arnberg, N., Stehle, T.
PDB entry 3exx: Structure of the T6 human insulin derivative with nickel at 1.35 A resolution
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2008-10-17
Authors: Prugovecki, B., Matkovic-Calogovic, D.
PDB entry 3exy: Crystal structure of the 2[4Fe-4S] ferredoxin V13G variant from allochromatium vinosum
Classification: ELECTRON TRANSPORT
Source organism: Allochromatium vinosum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2008-10-17
Authors: Giastas, P., Saridakis, E., Mavridis, I.M.
PDB entry 3exz: Crystal structure of the MaoC-like dehydratase from Rhodospirillum rubrum. Northeast Structural Genomics Consortium target RrR103a.
Classification: LYASE
Source organism: Rhodospirillum rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-10-17
Authors: Vorobiev, S.M., Su, M., Seetharaman, J., Wang, H., Foote, E.L., Ciccosanti, C., Janjua, H., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3ey0: A new form of DNA-drug interaction in the minor groove of a coiled coil
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2008-10-17
Authors: Pous, J., Moreno, T., Subirana, J.A., Campos, J.L.
PDB entry 3ey1: A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High Resolution
Classification: HYDROLASE/DNA
Source organism: Bacillus halodurans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-10-17
Authors: Egli, M., Pallan, P.S.
PDB entry 3ey2: A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High Resolution
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2008-10-17
Authors: Egli, M., Pallan, P.S.
PDB entry 3ey3: A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High Resolution
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2008-10-17
Authors: Egli, M., Pallan, P.S.
PDB entry 3ey4: Further studies with the 2-amino-1,3-thiazol-4(5H)-one class of 11-hydroxysteroid dehydrogenase type 1 (11-HSD1) inhibitors: Reducing pregnane X receptor (PXR) activity and exploring activity in a monkey pharmacodynamic model
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-10-17
Authors: Zhang, J.D., Jordan, S.R., Li, V.
PDB entry 3ey5: Putative acetyltransferase from GNAT family from Bacteroides thetaiotaomicron.
Classification: TRANSFERASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-10-17
Authors: Osipiuk, J., Bigelow, L., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ey6: Crystal structure of the FK506-binding domain of human FKBP38
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2008-10-19
Authors: Parthier, C., Maestre-Martinez, M., Neumann, P., Edlich, F., Fischer, G., Luecke, C., Stubbs, M.T.
PDB entry 3ey7: Structure from the mobile metagenome of V. Cholerae. Integron cassette protein VCH_CASS1
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-10-20
Authors: Harrop, S.J., Deshpande, C.N., Sureshan, V., Boucher, Y., Xu, X., Cui, H., Chang, C., Edwards, A., Joachimiak, A., Savchenko, A., Curmi, P.M.G., Mabbutt, B.C., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ey8: Structure from the mobile metagenome of V. Pseudocholerae. VPC_CASS1
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-10-20
Authors: Harrop, S.J., Deshpande, C.N., Sureshan, V., Boucher, Y., Xu, X., Cui, H., Chang, C., Edwards, A., Joachimiak, A., Savchenko, A., Curmi, P.M.G., Mabbutt, B.C., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ey9: Structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from Escherichia coli
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-10-20
Authors: Neumann, P., Weidner, A., Pech, A., Stubbs, M.T., Tittmann, K.
PDB entry 3eya: Structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from Escherichia coli
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-10-20
Authors: Neumann, P., Weidner, A., Pech, A., Stubbs, M.T., Tittmann, K.
PDB entry 3eyb: Structural and functional insights into the ligand binding domain of a non-duplicated RXR from the invertebrate chordate amphioxus
Classification: TRANSCRIPTION
Source organism: Branchiostoma floridae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2008-10-20
Authors: Tocchini-Valentini, G.D., Rochel, N., Moras, D., Structural Proteomics in Europe (SPINE)
PDB entry 3eyc: New crystal structure of human tear lipocalin in complex with 1,4-butanediol in space group P21
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-10-20
Authors: Breustedt, D.A., Keil, L., Skerra, A.
PDB entry 3eyd: Structure of HCV NS3-4A Protease with an Inhibitor Derived from a Boronic Acid
Classification: VIRAL PROTEIN
Source organism: Hepatitis C virus subtype 1a; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-10-20
Authors: Venkatraman, S., Wu, W., Prongay, A.J., Girijavallabhan, V., Njoroge, F.G.
PDB entry 3eye: Crystal structure of PTS system N-acetylgalactosamine-specific IIB component 1 from Escherichia coli
Classification: TRANSFERASE
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-10-20
Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Do, J., Sampathkumar, P., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3eyf: Crystal structure of anti-human cytomegalovirus antibody 8f9 plus gB peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-10-20
Authors: Thomson, C.A., Bryson, S., McLean, G.R., Creagh, A.L., Pai, E.F., Schrader, J.W.
PDB entry 3eyg: Crystal structures of JAK1 and JAK2 inhibitor complexes
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-10-20
Authors: Williams, N.K., Bamert, R.S., Patell, O., Wang, C., Walden, P.M., Fantino, E.
PDB entry 3eyh: Crystal structures of JAK1 and JAK2 inhibitor complexes
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-20
Authors: Williams, N.K., Bamert, R.S., Patell, O., Wang, C., Walden, P.M., Fantino, E.
PDB entry 3eyi: The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA
Classification: DNA Binding Protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-10-21
Authors: Ha, S.C., Kim, K.K.
PDB entry 3eyj: Structure of Influenza Haemagglutinin in complex with an inhibitor of membrane fusion
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-10-21
Authors: Russell, R.J., Kerry, P.S., Stevens, D.J., Steinahuer, D.A., Martin, S.R., Gamblin, S.J., Skehel, J.J.
PDB entry 3eyk: Structure of Influenza Haemagglutinin in complex with an inhibitor of membrane fusion
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-10-21
Authors: Russell, R.J., Kerry, P.S., Stevens, D.J., Steinhauer, D.A., Martin, S.R., Gamblin, S.J., Skehel, J.J.
PDB entry 3eyl: Crystal structure of XIAP BIR3 domain in complex with a Smac-mimetic compound
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-10-21
Authors: Cossu, F., Milani, M., Mastrangelo, E., Bolognesi, M.
PDB entry 3eym: Structure of Influenza Haemagglutinin in complex with an inhibitor of membrane fusion
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-10-21
Authors: Russell, R.J., Kerry, P.S., Stevens, D.A., Steinhauer, D.A., Martin, S.R., Gamblin, S.J., Skehel, J.J.
PDB entry 3eyo: Crystal structure of anti-human cytomegalovirus antibody 8F9
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-10-21
Authors: Thomson, C.A., Bryson, S., McLean, G.R., Creagh, A.L., Pai, E.F., Schrader, J.W.
PDB entry 3eyp: Crystal structure of putative alpha-L-fucosidase from Bacteroides thetaiotaomicron
Classification: structural genomics, unknown function
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-10-21
Authors: Bonanno, J.B., Freeman, J., Bain, K.T., Hu, S., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3eyq: Crystal structure of MJ5 Fab, a germline antibody variant of anti-human cytomegalovirus antibody 8f9
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-10-21
Authors: Thomson, C.A., Bryson, S., McLean, G.R., Creagh, A.L., Pai, E.F., Schrader, J.W.
PDB entry 3eys: PFA1 Fab fragment complexed with pyro-Glu3-A-Beta (3-8)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-10-21
Authors: Gardberg, A.S., Dealwis, C.G.
PDB entry 3eyt: Crystal structure of Thioredoxin-like superfamily protein SPOA0173
Classification: structural genomics, unknown function
Source organism: Silicibacter pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-10-21
Authors: Chang, C., Marshall, N., Freeman, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3eyu: PFA1 Fab fragment complexed with Ror2(518-525)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2008-10-21
Authors: Gardberg, A.S., Dealwis, C.G.
PDB entry 3eyv: Anti-Lewis Y Fab fragment with Lewis Y antigen in the presence of zinc ions
Classification: IMMUNE SYSTEM
Source organism: MUS MUSCULUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-10-22
Authors: Farrugia, W., Scott, A.M., Ramsland, P.A.
PDB entry 3eyw: Crystal structure of the C-terminal domain of E. coli KefC in complex with KefF
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-10-22
Authors: Roosild, T.P.
PDB entry 3eyx: Crystal structure of Carbonic Anhydrase Nce103 from Saccharomyces cerevisiae
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2008-10-22
Authors: Teng, Y.B., Jiang, Y.L., Chen, Y., Zhou, C.Z.
PDB entry 3eyy: Structural basis for the specialization of Nur, a nickel-specific Fur homologue, in metal sensing and DNA recognition
Classification: TRANSPORT
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-10-22
Authors: Cha, S.-S., An, Y.J.
PDB entry 3eyz: Cocrystal structure of Bacillus fragment DNA polymerase I with duplex DNA (open form)
Classification: TRANSFERASE/DNA
Source organism: Bacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-10-22
Authors: Warren, J.J., Wu, E.Y., Golosov, A.A., Karplus, M., Beese, L.S.
PDB entry 3ez0: Crystal structure of protein of unknown function with ferritin-like fold (YP_832262.1) from Arthrobacter sp. FB24 at 2.33 A resolution
Classification: structural genomics, unknown function
Source organism: Arthrobacter sp. FB24
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2008-10-22
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ez1: Crystal structure of putative aminotransferase (MocR family) (YP_604413.1) from DEINOCOCCUS GEOTHERMALIS DSM 11300 at 2.60 A resolution
Classification: TRANSFERASE
Source organism: Deinococcus geothermalis DSM 11300
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-10-22
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ez2: Partition protein-ADP complex
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-10-22
Authors: Schumacher, M.A., Dunham, T.D., Xu, W., Funnell, B.
PDB entry 3ez3: Crystal Structure of Plasmodium vivax geranylgeranylpyrophosphate synthase PVX_092040 with zoledronate and IPP bound
Classification: LYASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 2.304 Å
Deposited: 2008-10-22
Authors: Wernimont, A.K., Lew, J., Zhao, Y., Kozieradzki, I., Cossar, D., Schapira, M., Bochkarev, A., Arrowsmith, C.H., Bountra, C., Weigelt, J., Edwards, A.M., Hui, R., Artz, J.D., Structural Genomics Consortium (SGC)
PDB entry 3ez4: Crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase from Burkholderia pseudomallei
Classification: TRANSFERASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-10-22
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3ez5: Cocrystal structure of Bacillus fragment DNA polymerase I with duplex DNA , dCTP, and zinc (closed form).
Classification: TRANSFERASE/DNA
Source organism: Bacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-10-22
Authors: Warren, J.J., Wu, E.Y., Golosov, A.A., Karplus, M., Beese, L.S.
PDB entry 3ez6: Structure of parA-ADP complex:tetragonal form
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2008-10-22
Authors: Schumacher, M.A.
PDB entry 3ez7: Partition Protein Apo form in space group I4122
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2008-10-22
Authors: Schumacher, M.A.
PDB entry 3ez8: Crystal Structure of endoglucanase Cel9A from the thermoacidophilic Alicyclobacillus acidocaldarius
Classification: HYDROLASE
Source organism: Alicyclobacillus acidocaldarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.302 Å
Deposited: 2008-10-22
Authors: Pereira, J.H., Sapra, R., Simmons, B., Adams, P.D.
PDB entry 3ez9: Partition Protein
Classification: BIOSYNTHETIC PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Newport str. SL317
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-10-22
Authors: Schumacher, M.A.
PDB entry 3eza: COMPLEX OF THE AMINO TERMINAL DOMAIN OF ENZYME I AND THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR FROM ESCHERICHIA COLI NMR, RESTRAINED REGULARIZED MEAN STRUCTURE
Classification: COMPLEX (TRANSFERASE/PHOSPHOCARRIER)
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 1998-11-03
Authors: Clore, G.M., Garrett, D.S., Gronenborn, A.M.
PDB entry 3ezb: COMPLEX OF THE AMINO TERMINAL DOMAIN OF ENZYME I AND THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR FROM ESCHERICHIA COLI
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 1998-11-03
Authors: Clore, G.M., Garrett, D.S., Gronenborn, A.M.
PDB entry 3eze: COMPLEX OF THE AMINO TERMINAL DOMAIN OF ENZYME I AND THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR FROM ESCHERICHIA COLI NMR, RESTRAINED REGULARIZED MEAN STRUCTURE
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 1998-11-04
Authors: Clore, G.M., Garrett, D.S., Gronenborn, A.M.
PDB entry 3ezf: Partition Protein
Classification: BIOSYNTHETIC PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Newport str. SL317
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-10-22
Authors: Schumacher, M.A.
PDB entry 3ezg: Crystal structure of E18Q DJ-1 with oxidized C106
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2008-10-22
Authors: Lakshminarasimhan, M., Wilson, M.A.
PDB entry 3ezh: Crystal Structure of the E. coli Histidine Kinase NarX Sensor Domain in Complex with Nitrate
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-10-22
Authors: Cheung, J., Hendrickson, W.A.
PDB entry 3ezi: Crystal Structure of the E. coli Histidine Kinase NarX Sensor Domain without Ligand
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-10-22
Authors: Cheung, J., Hendrickson, W.A.
PDB entry 3ezj: Crystal structure of the N-terminal domain of the secretin GspD from ETEC determined with the assistance of a nanobody
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli; LAMA GLAMA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-10-22
Authors: Korotkov, K.V., Pardon, E., Steyaert, J., Hol, W.G.
PDB entry 3ezk: Bacteriophage T4 gp17 motor assembly based on crystal structures and cryo-EM reconstructions
Classification: HYDROLASE
Source organism: Bacteriophage T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 34 Å
Deposited: 2008-10-23
Authors: Sun, S., Rossmann, M.G.
PDB entry 3ezl: Crystal Structure of Acetoacetyl-CoA Reductase from Burkholderia Pseudomallei 1710b
Classification: OXIDOREDUCTASE
Source organism: Burkholderia pseudomallei 1710b
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-10-23
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3ezm: CYANOVIRIN-N
Classification: IMMUNE SYSTEM
Source organism: Nostoc ellipsosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 1998-12-15
Authors: Yang, F., Wlodawer, A.
PDB entry 3ezn: Crystal structure of phosphoglyceromutase from burkholderia pseudomallei 1710b
Classification: ISOMERASE
Source organism: Burkholderia pseudomallei 1710b
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-10-23
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3ezo: Crystal structure of acyl-carrier-protein s-malonyltransferase from burkholderia pseudomallei 1710b
Classification: TRANSFERASE
Source organism: Burkholderia pseudomallei 1710b
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-10-23
Authors: SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3ezp: Crystal Structure Analysis of human HDAC8 D101N variant
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-10-23
Authors: Dowling, D.P., Gantt, S.L., Gattis, S.G., Fierke, C.A., Christianson, D.W.
PDB entry 3ezq: Crystal Structure of the Fas/FADD Death Domain Complex
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2008-10-23
Authors: Schwarzenbacher, R., Robinson, H., Stec, B., Riedl, S.J.
PDB entry 3ezr: CDK-2 with indazole inhibitor 17 bound at its active site
Classification: TRANSFERASE/Transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-10-23
Authors: Kiefer, J.R., Day, J.E., Caspers, N.L., Mathis, K.J., Kretzmer, K.K., Weinberg, R.A., Reitz, B.A., Stegeman, R.A., Trujillo, J.I., Huang, W., Thorarensen, A., Xing, L., Wrightstone, A., Christine, L., Compton, R., Li, X.
PDB entry 3ezs: Crystal structure of aminotransferase AspB (NP_207418.1) from HELICOBACTER PYLORI 26695 at 2.19 A resolution
Classification: TRANSFERASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2008-10-23
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ezt: Crystal Structure Analysis of Human HDAC8 D101E Variant
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2008-10-23
Authors: Dowling, D.P., Gantt, S.L., Gattis, S.G., Fierke, C.A., Christianson, D.W.
PDB entry 3ezu: Crystal structure of multidomain protein of unknown function with GGDEF-domain (NP_951600.1) from GEOBACTER SULFURREDUCENS at 1.95 A resolution
Classification: SIGNALING PROTEIN
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-10-23
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ezv: CDK-2 with indazole inhibitor 9 bound at its active site
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2008-10-23
Authors: Kiefer, J.R., Day, J.E., Caspers, N.L., Mathis, K.J., Kretzmer, K.K., Weinberg, R.A., Reitz, B.A., Stegeman, R.A., Trujillo, J.I., Huang, W., Thorarensen, A., Xing, L., Wrightstone, A., Christine, L., Compton, R., Li, X.
PDB entry 3ezw: Crystal Structure of a Hyperactive Escherichia coli Glycerol Kinase Mutant Gly230 --> Asp Obtained Using Microfluidic Crystallization Devices
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-23
Authors: Anderson, M.J., DeLaBarre, B., Dunten, P., Brunger, A.T., Quake, S.R.
PDB entry 3ezx: Structure of Methanosarcina barkeri monomethylamine corrinoid protein
Classification: TRANSFERASE
Source organism: Methanosarcina barkeri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2008-10-23
Authors: Jain, R.
PDB entry 3ezy: Crystal structure of probable dehydrogenase TM_0414 from Thermotoga maritima
Classification: structural genomics, unknown function
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2008-10-24
Authors: Ramagopal, U.A., Toro, R., Freeman, J., Chang, S., Maletic, M., Gheyi, T., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ezz: Crystal Structure of human MKP-2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-10-24
Authors: Jeong, D.G., Jung, S.K., Ryu, S.E., Kim, S.J.
PDB entry 3f00: Crystal Structure of Synaptotagmin I C2A domain with Cu(II)
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2008-10-24
Authors: Guo, F., Dakshinamurthy, R., Thallapuranam, S.K.K., Sakon, J.
PDB entry 3f01: Crystal Structure of Synaptotagmin I C2A domain with Cu(II)
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-10-24
Authors: Guo, F., Dakshinamurthy, R., Thallapuranam, S.K.K., Sakon, J.
PDB entry 3f02: Cleaved human neuroserpin
Classification: HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-10-24
Authors: Ricagno, S., Sorrentino, G., Caccia, S., Bolognesi, M.
PDB entry 3f03: Crystal structure of Pentaerythritol Tetranitrate Reductase complex with 1-nitrocyclohexene
Classification: OXIDOREDUCTASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2008-10-24
Authors: Roujeinikova, A.R., Toogood, H.S., Leys, D.
PDB entry 3f04: Crystal Structure of Synaptotagmin I C2A domain
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2008-10-24
Authors: Guo, F., Dakshinamurthy, R., Thallapuranam, S.K.K., Sakon, J.
PDB entry 3f05: Crystal Structure of Synaptotagmin I C2A domain with Mn(II)
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-10-24
Authors: Guo, F., Dakshinamurthy, R., Thallapuranam, S.K.K., Sakon, J.
PDB entry 3f06: Crystal Structure Analysis of Human HDAC8 D101A Variant.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-10-24
Authors: Dowling, D.P., Gantt, S.L., Gattis, S.G., Fierke, C.A., Christianson, D.W.
PDB entry 3f07: Crystal Structure Analysis of Human HDAC8 complexed with APHA in a new monoclinic crystal form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-10-24
Authors: Dowling, D.P., Gantt, S.L., Gattis, S.G., Fierke, C.A., Christianson, D.W.
PDB entry 3f08: Crystal structure of the putative uncharacterized protein Q6HG14 from Bacilllus thuringiensis. Northeast Structural Genomics Consortium target BuR153.
Classification: structural genomics, unknown function
Source organism: Bacillus thuringiensis serovar konkukian
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-10-24
Authors: Kuzin, A.P., Abashidze, M., Seetharaman, J., Wang, H., Mao, L., Ciccosanti, C., Xiao, R., Nair, R., Baran, M.C., Swapna, G.V.T., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3f0a: Structure of a putative n-acetyltransferase (ta0374) in complex with acetyl-coa from thermoplasma acidophilum
Classification: TRANSFERASE
Source organism: Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-10-24
Authors: Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Clancy, S., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)
PDB entry 3f0b: Staphylococcus aureus dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-phenylphenyl)but-1-ynyl]-6-methylpyrimidine
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus RF122
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-10-24
Authors: Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.
PDB entry 3f0c: Crystal structure of transcriptional regulator from Cytophaga hutchinsonii ATCC 33406
Classification: transcription regulator
Source organism: Cytophaga hutchinsonii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2008-10-24
Authors: Nocek, B., Maltseva, N., Tan, K., Abdullah, J., Eschenfeldt, W., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3f0d: High resolution crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphatase synthase from Burkholderia pseudomallei
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-10-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3f0e: Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-10-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3f0f: Co-crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei with hydrolyzed CDP
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2008-10-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3f0g: Co-crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase with CMP
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2008-10-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3f0h: Crystal structure of Aminotransferase (RER070207000802) from Eubacterium rectale at 1.70 A resolution
Classification: TRANSFERASE
Source organism: Eubacterium rectale
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-10-24
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3f0i: Arsenate reductase from Vibrio cholerae.
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2008-10-24
Authors: Osipiuk, J., Gu, M., Stam, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3f0l: Crystal structure of oxidized D105N Synechocystis sp. PcyA
Classification: OXIDOREDUCTASE
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-10-25
Authors: Kohler, A.C., Gae, D.D.
PDB entry 3f0m: Crystal structure of radical D105N Synechocystis sp. PcyA
Classification: OXIDOREDUCTASE
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-10-25
Authors: Kohler, A.C., Gae, D.D.
PDB entry 3f0n: Mus Musculus Mevalonate Pyrophosphate Decarboxylase
Classification: LYASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-10-25
Authors: Walker, J.R., Davis, T., Vesterberg, A., Li, Y., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 3f0o: Crystal structure of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2008-10-25
Authors: Lafrance-Vanasse, J., Lefebvre, M., Di Lello, P., Sygusch, J., Omichinski, J.G.
PDB entry 3f0p: Crystal structure of the mercury-bound form of MerB, the Organomercurial Lyase involved in a bacterial mercury resistance system
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2008-10-25
Authors: Lafrance-Vanasse, J., Lefebvre, M., Di Lello, P., Sygusch, J., Omichinski, J.G.
PDB entry 3f0q: Staphylococcus aureus dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(2,6-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus RF122
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2008-10-25
Authors: Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.
PDB entry 3f0r: Crystal Structure Analysis of Human HDAC8 complexed with trichostatin A in a new monoclinic crystal form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2008-10-25
Authors: Dowling, D.P., Gantt, S.L., Gattis, S.G., Fierke, C.A., Christianson, D.W.
PDB entry 3f0s: Staphylococcus aureus dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(3,5-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus RF122
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-10-25
Authors: Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.
PDB entry 3f0t: Crystal structure of thymidine kinase from Herpes simplex virus type 1 in complex with N-methyl-DHBT
Classification: TRANSFERASE
Source organism: Herpes simplex virus (type 1 / strain 17)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-26
Authors: Pernot, L., Perozzo, R., Westermaier, Y., Martic, M., Ametamey, S., Scapozza, L.
PDB entry 3f0u: Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-phenylphenyl)but-1-ynyl]-6-methylpyrimidine
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus RF122
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-10-26
Authors: Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.
PDB entry 3f0v: Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(2,6-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus RF122
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-10-26
Authors: Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.
PDB entry 3f0w: Human NUMB-like protein, phosphotyrosine interaction domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-10-27
Authors: Lehtio, L., Moche, M., Andersson, J., Arrowsmith, C.H., Berglund, H., Bountra, C., D Busam, R., Collins, R., Dahlgren, L.G., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Karlberg, T., Kotenyova, T., Nilsson, M.E., Nyman, T., Persson, C., Sagemark, J., Schueler, H., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Weigelt, J., Welin, M., Wikstrom, M., Wisniewska, M., Nordlund, P., Structural Genomics Consortium (SGC)
PDB entry 3f0x: Staphylococcus aureus F98Y mutant dihydrofolate reductase complexed with NADPH and 2,4-Diamino-5-[3-(3-methoxy-5-(3,5-dimethylphenyl)phenyl)but-1-ynyl]-6-methylpyrimidine
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus RF122
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-10-27
Authors: Anderson, A.C., Frey, K.M., Liu, J., Lombardo, M.N.
PDB entry 3f0y: Crystal structure of the human Adenovirus type 14 fiber knob
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-10-27
Authors: Persson, B.D., Reiter, D.M., Arnberg, N., Stehle, T.
PDB entry 3f0z: Crystal structure of Clostridium acetobutylicum 8-oxoguanine glycosylase/lyase in its apo-form
Classification: HYDROLASE, LYASE
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-10-27
Authors: Faucher, F., Doublie, S.
PDB entry 3f10: Crystal structure of Clostridium Acetobutylicum 8-oxoguanine DNA glycosylase in complex with 8-oxoguanosine
Classification: HYDROLASE, LYASE
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-10-27
Authors: Faucher, F., Doublie, S.
PDB entry 3f11: Structure of futa1 with iron(III)
Classification: METAL TRANSPORT
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-27
Authors: Koropatkin, N.M., Randich, A.M., Bhattachryya-Pakrasi, M., Pakrasi, H.B., Smith, T.J.
PDB entry 3f12: Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-10-27
Authors: Thomson, C.A., Bryson, S., McLean, G.R., Creagh, A.L., Pai, E.F., Schrader, J.W.
PDB entry 3f13: Crystal structure of putative nudix hydrolase family member from Chromobacterium violaceum
Classification: HYDROLASE
Source organism: Chromobacterium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-10-27
Authors: Bonanno, J.B., Freeman, J., Bain, K.T., Do, J., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3f14: Crystal structure of NTF2-like protein of unknown function (YP_680363.1) from CYTOPHAGA HUTCHINSONII ATCC 33406 at 1.45 A resolution
Classification: structural genomics, unknown function
Source organism: Cytophaga hutchinsonii ATCC 33406
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-10-27
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3f15: Crystal structure of the catalytic domain of human mmp12 complexed with the inhibitor (S)-N-(2,3-dihydroxypropyl)-4-methoxy-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-10-27
Authors: Calderone, V.
PDB entry 3f16: Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor (R)-N-(3-hydroxy-1-nitroso-1-oxopropan-2-yl)-4-methoxybenzenesulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2008-10-27
Authors: Calderone, V.
PDB entry 3f17: Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor N-(2-nitroso-2-oxoethyl)biphenyl-4-sulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2008-10-27
Authors: Calderone, V.
PDB entry 3f18: Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor 4-fluoro-N-(2-hydroxyethyl)-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2008-10-27
Authors: Calderone, V.
PDB entry 3f19: Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor 4-fluoro-N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2008-10-27
Authors: Calderone, V.
PDB entry 3f1a: Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor N-(2-nitroso-2-oxoethyl)benzenesulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2008-10-27
Authors: Calderone, V.
PDB entry 3f1b: The crystal structure of a TetR-like transcriptional regulator from Rhodococcus sp. RHA1.
Classification: transcription regulator
Source organism: Rhodococcus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-10-27
Authors: Tan, K., Evdokimova, E., Kudritska, M., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)