LiteFold/PDB huggingface dataset:
PDB entry 8sc0: Crystal Structure of 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase from Klebsiella aerogenes (NAD bound, orthorhombic form)
Classification: OXIDOREDUCTASE
Source organism: Klebsiella aerogenes KCTC 2190
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-04-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8sc1: Human OCT1 (Apo) in inward-open conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-04-04
Authors: Zeng, Y.C., Sobti, M., Stewart, A.G.
PDB entry 8sc2: Human OCT1 bound to diltiazem in inward-open conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-04-04
Authors: Zeng, Y.C., Sobti, M., Stewart, A.G.
PDB entry 8sc3: Human OCT1 bound to fenoterol in inward-open conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2023-04-04
Authors: Zeng, Y.C., Sobti, M., Stewart, A.G.
PDB entry 8sc4: Human OCT1 bound to metformin in inward-open conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2023-04-04
Authors: Zeng, Y.C., Sobti, M., Stewart, A.G.
PDB entry 8sc6: Human OCT1 bound to thiamine in inward-open conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-04-04
Authors: Zeng, Y.C., Sobti, M., Stewart, A.G.
PDB entry 8sc7: Structure of EGFR in complex with MTX-531
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.984 Å
Deposited: 2023-04-05
Authors: Whitehead, C.E., Leopold, J.
PDB entry 8sc8: Structure of PI3KG in complex with MTX-531
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.687 Å
Deposited: 2023-04-05
Authors: Whitehead, C.E., Leopold, J.
PDB entry 8sc9: Structure of PPARG in complex with MTX-531
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.855 Å
Deposited: 2023-04-05
Authors: Whitehead, C.E., Leopold, J.
PDB entry 8sca: Rec3 Domain from S. pyogenes Cas9
Classification: RNA BINDING PROTEIN
Source organism: Streptococcus pyogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2023-04-05
Authors: D'Ordine, A.M., Skeens, E., Lisi, G.P., Jogl, G.
PDB entry 8scb: Terminating ribosome with SRI-41315
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-04-05
Authors: Yip, M.C.J., Coelho, J.P.L., Oltion, K., Tauton, J., Shao, S.
PDB entry 8scc: Crystal Structure of L-galactose 1-dehydrogenase de Myrciaria dubia
Classification: PLANT PROTEIN
Source organism: Myrciaria dubia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2023-04-05
Authors: Santillan, J.A.V., Cabrejos, D.A.L., Pereira, H.M., Gomez, J.C.C., Garratt, R.C.
PDB entry 8scd: Crystal structure of sulfonamide resistance enzyme Sul3 in complex with reaction intermediate
Classification: TRANSFERASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2023-04-05
Authors: Stogios, P.J., Venkatesan, M., Michalska, K., Mesa, N., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 8sce: Crystal structure of IRAK4-HSA complexed with N-[(2R)-2-FLUORO-3-HYDROXY-3-METHYLBUTYL]-6-[(5-FLUOROPYRI-YL)AMINO]-4-[(PROPAN-2-YL)AMINO]PYRIDINE-3-CARBOXAMIDE
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2023-04-05
Authors: Muckelbauer, J.K., Ghosh, K.
PDB entry 8scf: TCEIII NMR Structure
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2023-04-05
Authors: Warden, M.S., Mueller, G.A., Hall, T.M.T.
PDB entry 8scg: Bst DNA polymerase I Large Fragment mutant F710Y/D598A with 3'-amino primer, dGTP, and calcium time-resolved 0h (Ground State)
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8sch: TCEI_III NMR Structure
Classification: RNA
Experimental method: SOLUTION NMR, SOLUTION SCATTERING
Deposited: 2023-04-05
Authors: Warden, M.S., Mueller, G.A., Hall, T.M.T.
PDB entry 8sci: Bst DNA polymerase I Large Fragment mutant F710Y/D598A with 3'-amino primer, dGTP, and calcium time-resolved 1h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scj: Bst DNA polymerase I Large Fragment mutant F710Y/D598A with 3'-amino primer, dGTP, and calcium time-resolved 2h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8sck: Bst DNA polymerase I Large Fragment mutant F710Y/D598A with 3'-amino primer, dGTP, and calcium time-resolved 4h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scl: Bst DNA polymerase I Large Fragment mutant F710Y/D598A with 3'-amino primer, dGTP, and calcium time-resolved 6h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scm: Bst DNA polymerase I Large Fragment mutant F710Y/D598A with 3'-amino primer, dGTP, and calcium time-resolved 8h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scn: Bst DNA polymerase I Large Fragment mutant F710Y/D598A with 3'-amino primer, dGTP, and calcium time-resolved 24h (Product State)
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8sco: Bst DNA polymerase I Large Fragment wildtype D598A with 3'-amino primer, dGTP, and calcium time-resolved 0h (Ground State)
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scp: Bst DNA polymerase I Large Fragment wildtype D598A with 3'-amino primer, dGTP, and calcium time-resolved 1h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scq: Bst DNA polymerase I Large Fragment wildtype D598A with 3'-amino primer, dGTP, and calcium time-resolved 2h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scr: Bst DNA polymerase I Large Fragment wildtype D598A with 3'-amino primer, dGTP, and calcium time-resolved 4h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scs: Bst DNA polymerase I Large Fragment wildtype D598A with 3'-amino primer, dGTP, and calcium time-resolved 8h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8sct: Bst DNA polymerase I Large Fragment wildtype D598A with 3'-amino primer, dGTP, and calcium time-resolved 24h
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scu: Bst DNA polymerase I Large Fragment wildtype D598A with 3'-amino primer, dGTP, and calcium time-resolved 48h (Product State)
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2023-04-05
Authors: Fang, Z., Lelyveld, V.S., Szostak, J.W.
PDB entry 8scv: Crystal structure of IRAK4-HSA complexed with BMS-986126; 6-((5-CYANO-2-PYRIMIDINYL)AMINO)-N-((2R)-2-FLUORO-3-HYDROXHYLBUTYL)-4-(ISOPROPYLAMINO)NICOTINAMIDE
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2023-04-05
Authors: Muckelbauer, J.K., Ghosh, K.
PDB entry 8scw: Crystal structure of IRAK4-HSA complexed with BMS-986147; 6-{5-CYANO-1H-PYRAZOLO[3,4-B]PYRIDIN-1-YL}-N-[(2R)-2-FLUORROXY-3-METHYLBUTYL]-4-[(PROPAN-2-YL)AMINO]PYRIDINE-3-CARBOXAMIDE
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2023-04-05
Authors: Muckelbauer, J.K., Ghosh, K.
PDB entry 8scx: Cryo-EM structure of the core TIM23 complex from S. cerevisiae
Classification: TRANSLOCASE
Source organism: Mus musculus; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-04-05
Authors: Sim, S.I., Park, E.
PDB entry 8scy: Lysozyme crystallized in cyclic olefin copolymer-based microfluidic chips
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-04-05
Authors: Liu, Z., Gu, K., Shelby, M.L., Gilbile, D., Lyubimov, A.Y., Russi, S., Cohen, A.E., Coleman, M.A., Frank, M., Kuhl, T.L.
PDB entry 8scz: Cryo-EM structure of 14aa-GS RIG-I in complex with p3SLR30
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-04-06
Authors: Wang, W., Pyle, A.M.
PDB entry 8sd0: Cryo-EM structure of RIG-I in complex with p3SLR14
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-04-06
Authors: Wang, W., Pyle, A.M.
PDB entry 8sd1: Carbonic anhydrase II radiation damage RT 1-30
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.298 Å
Deposited: 2023-04-06
Authors: Combs, J.C., Mckenna, R.
PDB entry 8sd2: Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with small molecule fusion inhibitor compound 4
Classification: ANTIVIRAL PROTEIN
Source organism: Influenza A virus (strain A/Puerto Rico/8/1934 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2023-04-06
Authors: Kadam, R.U., Zhu, X.Y., Wilson, I.A.
PDB entry 8sd3: CryoEM structure of rat Kv2.1(1-598) wild type in nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-04-06
Authors: Tan, X., Swartz, K.J.
PDB entry 8sd4: Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with small molecule fusion inhibitor compound 7
Classification: ANTIVIRAL PROTEIN
Source organism: Influenza A virus (strain A/Puerto Rico/8/1934 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2023-04-06
Authors: Kadam, R.U., Zhu, X., Wilson, I.A.
PDB entry 8sd5: Crystal structure of HPPK from Methanocaldococcus jannaschii
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.802 Å
Deposited: 2023-04-06
Authors: Shaw, G.X., Needle, D., Stair, N.R., Cherry, S., Tropea, J.E., Waugh, D.S., Ji, X.
PDB entry 8sd6: Carbonic anhydrase II radiation damage RT 31-60
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.397 Å
Deposited: 2023-04-06
Authors: Combs, J.E., Mckenna, R.
PDB entry 8sd7: Carbonic anhydrase II radiation damage RT 61-90
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.704 Å
Deposited: 2023-04-06
Authors: Combs, J.E., Mckenna, R.
PDB entry 8sd8: Carbonic anhydrase II radiation damage RT 91-120
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.789 Å
Deposited: 2023-04-06
Authors: Combs, J.E., Mckenna, R.
PDB entry 8sd9: Carbonic anhydrase II radiation damage RT 121-150
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.904 Å
Deposited: 2023-04-06
Authors: Combs, J.E., Mckenna, R.
PDB entry 8sda: CryoEM structure of rat Kv2.1(1-598) L403A mutant in nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2023-04-06
Authors: Tan, X., Swartz, K.J.
PDB entry 8sdb: Crystal Structure of E.Coli Branching Enzyme in complex with malto-octose
Classification: TRANSFERASE/CARBOHYDRATE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-04-06
Authors: Bingham, C.R., Nayebi, H., Fawaz, R., Geiger, J.H.
PDB entry 8sdc: Crystal structure of fluoroacetate dehalogenase Daro3835 apoenzyme
Classification: HYDROLASE
Source organism: Dechloromonas aromatica RCB
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2023-04-06
Authors: Stogios, P.J., Skarina, T., Khusnutdinova, A., Iakounine, A., Savchenko, A.
PDB entry 8sdd: Crystal structure of fluoroacetate dehalogenase Daro3835 H274N mutant with D107-glycolyl intermediate
Classification: HYDROLASE
Source organism: Dechloromonas aromatica RCB
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-04-06
Authors: Stogios, P.J., Skarina, T., Khusnutdinova, A., Iakounine, A., Savchenko, A.
PDB entry 8sde: Electrostatic-Mediated Tetramerization of the Coiled-Coil Domain in TRIM29
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2023-04-06
Authors: Lou, X.H., Zhuang, Y., Ma, B.B., Li, X.C.
PDB entry 8sdf: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.4
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2023-04-06
Authors: Yuan, M., Wilson, I.A.
PDB entry 8sdg: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.43
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2023-04-06
Authors: Yuan, M., Wilson, I.A.
PDB entry 8sdh: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.56
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2023-04-06
Authors: Yuan, M., Wilson, I.A.
PDB entry 8sdi: Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM45 Coiled-Coil Domain
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-04-06
Authors: Lou, X.H., Ma, B.B., Zhuang, Y., Li, X.C.
PDB entry 8sdj: Hydrophobic Interactions Drive the Tetrameric Assembly of the TRIM20 Coiled-Coil Domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-04-06
Authors: Lou, X.H., Ma, B.B., Zhuang, Y., Li, X.C.
PDB entry 8sdk: The MicroED structure of proteinase K crystallized by suspended drop crystallization
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.1 Å
Deposited: 2023-04-06
Authors: Gillman, C., Nicolas, W.J., Martynowycz, M.W., Gonen, T.
PDB entry 8sdl: Crystal structure of PDC-3 beta-lactamase
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-04-07
Authors: Kumar, V., van den Akker, F.
PDB entry 8sdm: HTRA-1 PDSA bound to CKP 3B3
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2023-04-07
Authors: Ultsch, M.H., Kirchhofer, D., Wei, Y.
PDB entry 8sdn: Crystal structure of PDC-3 Y221H beta-lactamase
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-07
Authors: Kumar, V., van den Akker, F.
PDB entry 8sdo: ATAD2 bromodomain in complex with ""oncohistone"" mutation H4S1CK5ac (res 1-15) ligand
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-04-07
Authors: Malone, K.L., Nix, J.C., Glass, K.C.
PDB entry 8sdp: HTRA-1 PDSA bound to CKP 3A7
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2023-04-07
Authors: Ultsch, M.H., Kirchhofer, D., Wei, Y.
PDB entry 8sdq: ATAD2 bromodomain in complex with H4S1phK5ac (res 1-15) ligand
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-04-07
Authors: Malone, K.L., Nix, J.C., Glass, K.C.
PDB entry 8sdr: Crystal structure of PDC-3 beta-lactamase in complex with the boronic acid inhibitor LP-06
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-04-07
Authors: Kumar, V., van den Akker, F.
PDB entry 8sds: Crystal structure of PDC-3 Y221H beta-lactamase in complex with the boronic acid inhibitor LP-06
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-04-07
Authors: Kumar, V., van den Akker, F.
PDB entry 8sdt: Crystal structure of PDC-3 beta-lactamase in complex with the boronic acid inhibitor S02030
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2023-04-07
Authors: Kumar, V., van den Akker, F.
PDB entry 8sdu: Structure of rat organic anion transporter 1 (OAT1)
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.05 Å
Deposited: 2023-04-07
Authors: Dou, T., Jiang, J.
PDB entry 8sdv: Crystal structure of PDC-3 Y221H beta-lactamase in complex with the boronic acid inhibitor S02030
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-04-07
Authors: Kumar, V., van den Akker, F.
PDB entry 8sdw: Crystal structure of the non-myristoylated mutant [L8K]Arf1 in complex with a GDP analogue
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-04-07
Authors: Rosenberg Jr., E.M., Randazzo, P.A., Esser, L., Xia, D.
PDB entry 8sdx: ATAD2B bromodomain in complex with histone H4 acetylated at lysine 5 with Serine 1 mutation to Cysteine
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2023-04-07
Authors: Phillips, M., Montgomery, C., Nix, J.C., Glass, K.C.
PDB entry 8sdy: Structure of rat organic anion transporter 1 (OAT1) in complex with para-aminohippuric acid (PAH)
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-04-07
Authors: Dou, T., Jiang, J.
PDB entry 8sdz: Structure of rat organic anion transporter 1 (OAT1) in complex with probenecid
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-04-07
Authors: Dou, T., Jiang, J.
PDB entry 8se1: Structure of Full-length Human Protein Kinase C Beta 2 (PKCBII) in the Inactive Conformation
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2023-04-07
Authors: Cong, A.T.Q., Witter, T.L., Bruinsma, E.S., Jayaraman, S., Dugan, M.B., Hawse, J.R., Goetz, M.P., Schellenberg, M.J.
PDB entry 8se2: Structure of Full-length Human Protein Kinase C Beta 1 (PKCBI) in the Active and Inactive Conformation Soaked in Manganese Chloride
Classification: SIGNALING PROTEIN,TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2023-04-07
Authors: Cong, A.T.Q., Witter, T.L., Bruinsma, E.S., Jayaraman, S., Hawse, J.R., Goetz, M.P., Schellenberg, M.J.
PDB entry 8se3: Structure of Full-length Human Protein Kinase C Beta 1 (PKCBI) in the Active Conformation
Classification: SIGNALING PROTEIN,TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-04-07
Authors: Cong, A.T.Q., Witter, T.L., Bruinsma, E.S., Jayaraman, S., Hawse, J.R., Goetz, M.P., Schellenberg, M.J.
PDB entry 8se4: Structure of Full-length Human Protein Kinase C Beta 1 (PKCBI) in the Active and Inactive Conformation
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2023-04-07
Authors: Cong, A.T.Q., Witter, T.L., Bruinsma, E.S., Jayaraman, S., Hawse, J.R., Goetz, M.P., Schellenberg, M.J.
PDB entry 8se5: NKG2D complexed with inhibitor 14
Classification: IMMUNE SYSTEM/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2023-04-08
Authors: Thompson, A.A., Grant, J.C., Karpowich, N.K., Sharma, S.
PDB entry 8se6: NKG2D complexed with inhibitor 36
Classification: IMMUNE SYSTEM/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2023-04-08
Authors: Thompson, A.A., Grant, J.C., Karpowich, N.K., Sharma, S.
PDB entry 8se7: HTRA-1 PDSA bound to CKP 1A8
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2023-04-08
Authors: Ultsch, M.H., Kirchhofer, D., Wei, Y.
PDB entry 8se8: HTRA-1 PD/SA bound to CKP 1G10
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å
Deposited: 2023-04-08
Authors: Ultsch, M.H.
PDB entry 8se9: Cryo-EM structure of a double loaded human UBA7-UBE2L6-ISG15 thioester mimetic complex (Form 2)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-04-08
Authors: Afsar, M., Jia, L., Ruben, E.A., Olsen, S.K.
PDB entry 8sea: Cryo-EM structure of a double loaded human UBA7-UBE2L6-ISG15 thioester mimetic complex (Form 1)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-04-08
Authors: Afsar, M., Jia, L., Ruben, E.A., Olsen, S.K.
PDB entry 8seb: Cryo-EM structure of a single loaded human UBA7-UBE2L6-ISG15 adenylate complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2023-04-08
Authors: Afsar, M., Jia, L., Ruben, E.A., Olsen, S.K.
PDB entry 8sed: Structure of a new ShKT peptide from the sea anemone Telmatactis stephensoni: ShKT-Ts1
Classification: TOXIN
Source organism: Telmatactis stephensoni
Experimental method: SOLUTION NMR
Deposited: 2023-04-09
Authors: Sanches, K., Siedoks, A.A., Wai, D.C.C., Norton, R.S.
PDB entry 8sef: Crystal structure of Cy137C02, a monoclonal antibody isolated from macaques immunized with an Epstein-Barr virus glycoprotein 350 (gp350) nanoparticle vaccine
Classification: IMMUNE SYSTEM
Source organism: Macaca fascicularis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2023-04-09
Authors: Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M.
PDB entry 8seh: PHF Tau from Down Syndrome
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-04-10
Authors: Hoq, M.R., Bharath, S.R., Jiang, W., Vago, F.S.
PDB entry 8sei: SF Tau from Down Syndrome
Classification: NEUROPEPTIDE
Source organism: Homo
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-04-10
Authors: Hoq, M.R., Bharath, S.R., Jiang, W., Vago, F.S., Bharath, S.R.
PDB entry 8sej: Type I beta-amyloid 42 Filaments from Down syndrome
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-04-10
Authors: Hoq, M.R., Bharath, S.R., Vago, F.S., Jiang, W.
PDB entry 8sek: Type IIIa beta-amyloid 40 Filaments from Down syndrome
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-04-10
Authors: Hoq, M.R., Vago, F.S., Bharath, S.R., Jiang, W.
PDB entry 8sel: Type IIIb beta-amyloid 40 Filaments from Down Syndrome
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-04-10
Authors: Hoq, M.R., Vago, F.S., Bharath, S.R., Jiang, W.
PDB entry 8sem: Structural and functional characterisation of Tst2, a novel TRPV1 inhibitory peptide from the Australian sea anemone Telmatactis stephensoni
Classification: TOXIN
Source organism: Telmatactis stephensoni
Experimental method: SOLUTION NMR
Deposited: 2023-04-10
Authors: Elnahriry, K.A., Wai, D.C.C., Norton, R.S.
PDB entry 8sen: Cryo-EM Structure of RyR1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8seo: Cryo-EM Structure of RyR1 + ATP-gamma-S
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8sep: Cryo-EM Structure of RyR1 + ADP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8seq: Cryo-EM Structure of RyR1 + AMP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8ser: Cryo-EM Structure of RyR1 + Adenosine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8ses: Cryo-EM Structure of RyR1 + Adenine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8set: Cryo-EM Structure of RyR1 + cAMP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8seu: Cryo-EM Structure of RyR1 (Local Refinement of TMD)
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8sev: Cryo-EM Structure of RyR1 + ATP-gamma-S (Local Refinement of TMD)
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8sew: Cryo-EM Structure of RyR1 + ADP (Local Refinement of TMD)
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8sex: Cryo-EM Structure of RyR1 + AMP (Local Refinement of TMD)
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8sey: Cryo-EM Structure of RyR1 + Adenosine (Local Refinement of TMD)
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8sez: Cryo-EM Structure of RyR1 + Adenine (Local Refinement of TMD)
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8sf0: Cryo-EM Structure of RyR1 + cAMP (Local Refinement of TMD)
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-04-10
Authors: Cholak, S., Saville, J.W., Zhu, X., Berezuk, A.M., Tuttle, K.S., Haji-Ghassemi, O., Van Petegem, F., Subramaniam, S.
PDB entry 8sf1: Carbonic anhydrase II XFEL radiation damage RT
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-04-10
Authors: Combs, J.E., Mckenna, R.
PDB entry 8sf2: Crystal structure of the engineered SsoPox variant IG7
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-04-10
Authors: Jacquet, P., Billot, R., Shimon, A., Hoekstra, N., Bergonzi, C., Jenks, A., Daude, D., Elias, M.H.
PDB entry 8sf3: Crystal Structure of Acetyl-coenzyme A synthetase from Leishmania infantum (AMP, Acetate and CoA bound)
Classification: LIGASE
Source organism: Leishmania infantum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-04-10
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8sf4: Cystathionine gamma lyase from Thermobifida fusca in internal aldimine form
Classification: LYASE
Source organism: Thermobifida fusca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.455 Å
Deposited: 2023-04-10
Authors: Perkins, L.J., Buller, A.R., Bindman, C.A.
PDB entry 8sf5: Promiscuous amino acid gamma synthase from Caldicellulosiruptor hydrothermalis in open conformation
Classification: TRANSFERASE
Source organism: Caldicellulosiruptor hydrothermalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-04-10
Authors: Buller, A.R., Zmich, A.P., Bingman, C.A.
PDB entry 8sf6: Promiscuous amino acid gamma synthase from Caldicellulosiruptor hydrothermalis in closed conformation
Classification: TRANSFERASE
Source organism: Caldicellulosiruptor hydrothermalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.702 Å
Deposited: 2023-04-10
Authors: Buller, A.R., Zmich, A.P., Bingman, C.A.
PDB entry 8sf7: 48-nm doublet microtubule from Tetrahymena thermophila strain MEC17
Classification: STRUCTURAL PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-04-10
Authors: Black, C.S., Kubo, S., Yang, S.K., Bui, K.H.
PDB entry 8sf8: Structure of bovine PKA bound to (R)-N-(4-(1H-pyrrolo[2,3-b]pyridin-4-yl)phenyl)-2-amino-4-methylpentanamide
Classification: CYTOSOLIC PROTEIN
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-04-10
Authors: Coker, J.A., Arya, T., Goins, C.M., Maw, J.J., Macdonald, J.D., Stauffer, S.R.
PDB entry 8sf9: Crystal structure of the engineered SsoPox variant IG7 - Alternative state
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-04-10
Authors: Jacquet, P., Billot, R., Shimon, A., Hoekstra, N., Bergonzi, C., Jenks, A., Daude, D., Elias, M.H.
PDB entry 8sfa: Crystal structure of the engineered SsoPox variant IIIC1
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2023-04-10
Authors: Jacquet, P., Billot, R., Shimon, A., Hoekstra, N., Bergonzi, C., Jenks, A., Daude, D., Elias, M.H.
PDB entry 8sfb: Crystal structure of the engineered SsoPox variant IVA4
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-04-10
Authors: Jacquet, P., Billot, R., Shimon, A., Hoekstra, N., Bergonzi, C., Jenks, A., Daude, D., Elias, M.H.
PDB entry 8sfc: Crystal structure of the engineered SsoPox variant IVA4 in alternate state
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-04-10
Authors: Jacquet, P., Billot, R., Shimon, A., Hoekstra, N., Bergonzi, C., Jenks, A., Daude, D., Elias, M.H.
PDB entry 8sfd: Crystal structure of the engineered SsoPox variant IVB10
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-04-10
Authors: Jacquet, P., Billot, R., Shimon, A., Hoekstra, N., Bergonzi, C., Jenks, A., Daude, D., Elias, M.H.
PDB entry 8sfe: Open state CCT-G beta 5 complex
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-04-10
Authors: Wang, S., Sass, M., Willardson, B.M., Shen, P.S.
PDB entry 8sff: CCT G beta 5 complex closed state 0
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-04-11
Authors: Wang, S., Sass, M., Willardson, B.M., Shen, P.S.
PDB entry 8sfg: Crystal Structure of the Open Unbound Catalytically Inactive Makes Caterpillars Floppy-like (MCF) Effector from Vibrio vulnificus CMCP6
Classification: TOXIN
Source organism: Vibrio vulnificus CMCP6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-04-11
Authors: Minasov, G., Shuvalova, L., Rosas-Lemus, M., Herrera, A., Satchell, K.J.F., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8sfh: WT CRISPR-Cas12a with a 5bp R-loop
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Acidaminococcus sp. BV3L6; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-04-11
Authors: Strohkendl, I., Taylor, D.W.
PDB entry 8sfi: WT CRISPR-Cas12a with a 8bp R-loop
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Acidaminococcus sp. BV3L6; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-04-11
Authors: Strohkendl, I., Taylor, D.W.
PDB entry 8sfj: WT CRISPR-Cas12a with a 10bp R-loop
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Acidaminococcus sp. BV3L6; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-04-11
Authors: Strohkendl, I., Taylor, D.W.
PDB entry 8sfk: Crystal structure of the engineered SsoPox variant IVE2
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-04-11
Authors: Jacquet, P., Billot, R., Shimon, A., Hoekstra, N., Bergonzi, C., Jenks, A., Daude, D., Elias, M.H.
PDB entry 8sfl: WT CRISPR-Cas12a with a 15bp R-loop
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Acidaminococcus sp. BV3L6; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-04-11
Authors: Strohkendl, I., Taylor, D.W.
PDB entry 8sfm: Crystal structure of the engineered SsoPox variant IVB10 in alternate state
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-04-11
Authors: Jacquet, P., Billot, R., Shimon, A., Hoekstra, N., Bergonzi, C., Jenks, A., Daude, D., Elias, M.H.
PDB entry 8sfn: WT CRISPR-Cas12a with a 16bp R-loop and nontarget strand in the RuvC active site.
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Acidaminococcus sp. BV3L6; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-04-11
Authors: Strohkendl, I., Taylor, D.W.
PDB entry 8sfo: WT CRISPR-Cas12a with a 20bp R-loop and nontarget strand in the RuvC active site.
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Acidaminococcus sp. BV3L6; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-04-11
Authors: Strohkendl, I., Taylor, D.W.
PDB entry 8sfp: WT CRISPR-Cas12a with the target strand in the RuvC active site.
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Acidaminococcus sp. BV3L6; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-04-11
Authors: Strohkendl, I., Taylor, D.W.
PDB entry 8sfq: WT CRISPR-Cas12a post nontarget strand-cleavage with the the RuvC active site exposed.
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Acidaminococcus sp. BV3L6; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-04-11
Authors: Strohkendl, I., Taylor, D.W.
PDB entry 8sfr: WT CRISPR-Cas12a post nontarget strand cleavage.
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Acidaminococcus sp. BV3L6; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-04-11
Authors: Strohkendl, I., Taylor, D.W.
PDB entry 8sfs: High Affinity nanobodies against GFP
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2023-04-11
Authors: Ketaren, N.E., Rout, M.P., Bonnano, J.B., Almo, S.C.
PDB entry 8sft: Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with kaempferol
Classification: TRANSFERASE
Source organism: Tetranychus urticae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-04-11
Authors: Arriaza, R.H., Dermauw, W., Wybouw, N., Van Leeuwen, T., Chruszcz, M.
PDB entry 8sfu: Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with naringin
Classification: TRANSFERASE
Source organism: Tetranychus urticae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-04-11
Authors: Arriaza, R.H., Dermauw, W., Wybouw, N., Van Leeuwen, T., Chruszcz, M.
PDB entry 8sfv: High affinity nanobodies to GFP
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-04-11
Authors: Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C.
PDB entry 8sfw: Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with quercetin
Classification: TRANSFERASE
Source organism: Tetranychus urticae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-04-11
Authors: Arriaza, R.H., Dermauw, W., Wybouw, N., Van Leeuwen, T., Chruszcz, M.
PDB entry 8sfx: High Affinity nanobodies against GFP
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-04-11
Authors: Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C.
PDB entry 8sfy: Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with UDP-glucose
Classification: TRANSFERASE
Source organism: Tetranychus urticae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-04-11
Authors: Arriaza, R.H., Daneshian, L., Dermauw, W., Wybouw, N., Van Leeuwen, T., Chruszcz, M.
PDB entry 8sfz: High Affinity nanobodies against GFP
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-04-11
Authors: Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C.
PDB entry 8sg0: Crystal Structure of GDP-manose 3,5 epimerase de Myrciaria dubia in complex with substrate, product and NAD
Classification: PLANT PROTEIN
Source organism: Myrciaria dubia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-04-11
Authors: Santillan, J.A.V., Cabrejos, D.A.L., Pereira, H.M., Gomez, J.C.C., Garratt, R.C.
PDB entry 8sg1: Cryo-EM structure of CMKLR1 signaling complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-04-11
Authors: Zhang, X., Zhang, C.
PDB entry 8sg2: BIVALENT INTERACTIONS OF PIN1 WITH THE C-TERMINAL TAIL OF PKC
Classification: ISOMERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2023-04-11
Authors: Dixit, K., Yang, Y., Chen, X.R., Igumenova, T.I.
PDB entry 8sg3: High Affinity nanobodies against GFP
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2023-04-11
Authors: Ketaren, N.E., Rout, M.P., Bonanno, J.B., Almo, S.C.
PDB entry 8sg4: E1435Q Ycf1 mutant in dephosphorylated state
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2023-04-11
Authors: Khandelwal, N.K., Tomasiak, T.M.
PDB entry 8sg5: Cytochrome P450 (CYP) 3A5 crystallized with clotrimazole
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-04-11
Authors: Hsu, M.H., Johnson, E.F.
PDB entry 8sg6: SARS-CoV-2 Main Protease (Mpro) H163A Mutant Reduced with 20mM TCEP
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2023-04-11
Authors: Tran, N., McLeod, M.J., Barwell, S., Kalyaanamoorthy, S., Ganesan, A., Holyoak, T.
PDB entry 8sg7: Adeno-Associated Virus Bat origin capsid protein basic regions in complex with importin-alpha 2
Classification: TRANSPORT PROTEIN
Source organism: Bat adeno-associated virus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-04-11
Authors: Hoad, M., Forwood, J.K.
PDB entry 8sg8: CCT G beta 5 complex closed state 1
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-04-11
Authors: Wang, S., Sass, M., Willardson, B.M., Shen, P.S.
PDB entry 8sg9: CCT G beta 5 complex closed state 3
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-04-12
Authors: Wang, S., Sass, M., Willardson, B.M., Shen, P.S.
PDB entry 8sga: Crystal structure of 770E11, a monoclonal antibody isolated from a human Epstein-Barr virus seropositive donor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-04-12
Authors: Chen, W.H., Jensen, J.L., Joyce, M.G.
PDB entry 8sgb: Crystal Structure of CD1d-lipid complexed with Beta-2-Microglobulin, TCR Alpha-Chain and TCR Beta-Chain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.80002 Å
Deposited: 2023-04-12
Authors: Chan Yew Poa, K.T.O., Le Nours, J., Rossjohn, J.
PDB entry 8sgc: CCT G beta 5 complex closed state 2
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-04-12
Authors: Wang, S., Sass, M., Willardson, B.M., Shen, P.S.
PDB entry 8sgd: Crystal Structure of CDC3(G) - CDC10(Delta 1-10) heterocomplex from Saccharomyces cerevisiae
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2023-04-12
Authors: Saladino, G.C.R., Leonardo, D.A., Pereira, H.M., Garratt, R.C.
PDB entry 8sge: KLHDC2 Kelch Domain with ligand KDRLKZ-1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.509 Å
Deposited: 2023-04-12
Authors: Digianantonio, K.M., Bekes, M., Langley, D.R., Zimmerman, K.
PDB entry 8sgf: KLHDC2 Kelch Domain with KLHDC2 c-terminal peptide bound
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.418 Å
Deposited: 2023-04-12
Authors: Digianantonio, K.M., Bekes, M., Langley, D.R., Zimmerman, K.
PDB entry 8sgg: Crystal structure of Cy137D09, a monoclonal antibody isolated from macaques immunized with an Epstein-Barr virus glycoprotein 350 (gp350) nanoparticle vaccine
Classification: IMMUNE SYSTEM
Source organism: Macaca fascicularis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2023-04-12
Authors: Joyce, M.G., Jensen, J.L., Chen, W.H., Kanekiyo, M.
PDB entry 8sgh: Cryo-EM structure of Karyopherin-beta2 bound to HNRNPH2 PY-NLS
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-04-12
Authors: Gonzalez, A., Fung, H.Y.J., Chook, Y.M.