LiteFold/PDB huggingface dataset:
PDB entry 8buw: Crystal structure of Trichoplax Scribble PDZ1 domain in complex with Trichoplax Vangl peptide
Classification: PROTEIN BINDING
Source organism: Trichoplax sp. H2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-12-01
Authors: Maddumage, J.C., Kvansakul, M.
PDB entry 8bux: Rab-binding domain of human MiniBAR
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2022-12-01
Authors: Pylypenko, O., Hammich, H., Houdusse, A.
PDB entry 8buy: Rac-binding domain of human MiniBAR
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-01
Authors: Pylypenko, O., Hammich, H., Houdusse, A.
PDB entry 8buz: Structure of Adenylyl cyclase 8 bound to stimulatory G-protein, Ca2+/Calmodulin, Forskolin and MANT-GTP
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-12-01
Authors: Khanppnavar, B., Korkhov, V.M., Mehta, V.
PDB entry 8bv0: Binary complex between the NB-ARC domain from the Tomato immune receptor NRC1 and the SPRY domain-containing effector SS15 from the potato cyst nematode
Classification: PROTEIN BINDING
Source organism: Globodera rostochiensis; Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 4.5 Å
Deposited: 2022-12-01
Authors: Contreras, M.P., Pai, H., Muniyandi, S., Toghani, A., Lawson, D.M., Tumtas, Y., Duggan, C., Yuen, E.L.H., Stevenson, C.E.M., Harant, A., Wu, C.H., Bozkurt, T.O., Kamoun, S., Derevnina, L.
PDB entry 8bv1: Peptide inhibitor P4 in complex with ASF1 histone chaperone
Classification: CHAPERONE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.834 Å
Deposited: 2022-12-01
Authors: Perrin, M.E., Li, B., Mbianda, J., Ropars, V., Legrand, P., Douat, C., Ochsenbein, F., Guichard, G.
PDB entry 8bv2: Biological and structural analysis of new potent Integrase-LEDGF allosteric HIV-1 inhibitors
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-01
Authors: Ruff, M., Benarous, R.
PDB entry 8bv3: Bacillus subtilis DnaA domain III structure
Classification: CELL CYCLE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-12-01
Authors: Pintar, S., Hubbard, J.A.
PDB entry 8bv4: Structure of BlaC from Mycobacterium tuberculosis in complex with vaborbactam
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-12-01
Authors: Chikunova, A., Bruenle, S., Ubbink, M.
PDB entry 8bv5: Focus refinement of soluble domain of Adenylyl cyclase 8 bound to stimulatory G protein, Forskolin, ATPalphaS, and Ca2+/Calmodulin in lipid nanodisc conditions
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2023-01-04
Authors: Khanppnavar, B., Korkhov, V.M.
PDB entry 8bv6: An i-motif domain able to undergo pH-dependent conformational transitions (neutral structure)
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2022-12-01
Authors: Serrano-Chacon, I., Mir, B., Cupellini, L., Colizzi, F., Orozco, M., Escaja, N., Gonzalez, C.
PDB entry 8bv7: Crystal structure of the Trichoplax Scribble PDZ1 domain in complex with the Trichoplax phosphorylated Vangl peptide
Classification: PROTEIN BINDING
Source organism: Trichoplax sp. H2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-12-02
Authors: Maddumage, J.C., Kvansakul, M.
PDB entry 8bv8: Crystal structure of the phage Mu protein Mom inactive mutant S124A
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Mu
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2022-12-08
Authors: Silva, R.M.B., Slyvka, A., Lee, Y.J., Guan, C., Lund, S.R., Raleigh, E.A., Skowronek, K., Bochtler, M., Weigele, P.R.
PDB entry 8bv9: Acylphosphatase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.552 Å
Deposited: 2023-01-18
Authors: Gavira, J.A., Martinez-Rodriguez, S.
PDB entry 8bva: Crystal Structure of Mus musculus Protein Arginine Methyltransferase 2 in complex with RSF1_114-126
Classification: TRANSFERASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-12-02
Authors: Cura, V., Troffer-Charlier, N., Marechal, N., Bonnefond, L., Cavarelli, J.
PDB entry 8bvb: Crystal structure of the apo form of SmbA loop deletion mutant.
Classification: SIGNALING PROTEIN
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-12-02
Authors: Dubey, B.N., Schirmer, T.
PDB entry 8bvc: Solution structure of Metridium senile toxin Ms13-1 with the unique fold
Classification: TOXIN
Source organism: Metridium senile
Experimental method: SOLUTION NMR
Deposited: 2022-12-06
Authors: Mineev, K.S., Arseniev, A.S., Andreev, Y.A., Osmakov, D.I., Khasanov, T.A.
PDB entry 8bvd: FimH lectin domain in complex with mannose C-linked to quinoline
Classification: CELL ADHESION
Source organism: Escherichia coli UTI89
Experimental method: X-RAY DIFFRACTION
Resolution: 2.995 Å
Deposited: 2022-12-03
Authors: Bouckaert, J., Bridot, C.
PDB entry 8bve: MoeA2 from Corynebacterium glutamicum
Classification: CELL CYCLE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-12-03
Authors: Martinez, M., Haouz, A., Wehenkel, A.M., Alzari, P.M.
PDB entry 8bvf: MoeA2 from Corynebacterium glutamicum in complex with FtsZ-CTD
Classification: CELL CYCLE
Source organism: Corynebacterium glutamicum ATCC 13032; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2022-12-03
Authors: Martinez, M., Haouz, A., Wehenkel, A.M., Alzari, P.M.
PDB entry 8bvg: Bright fluorescent protein BrUSLEE with subnanosecond fluorescence lifetime
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-12-03
Authors: Pletnev, V., Pletneva, N.
PDB entry 8bvh: Cryo-EM structure of the Hfq-Crc-amiE translation repression assembly.
Classification: RNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-12-03
Authors: Dendooven, T., Luisi, B.F.
PDB entry 8bvi: Crystal structure of the METTL9-like histidine methyltransferase from Ostreococcus tauri
Classification: TRANSFERASE
Source organism: Ostreococcus tauri
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-12-04
Authors: Hammerstad, M., Schroer, L., Hersleth, H.-P.
PDB entry 8bvj: Hfq-Crc-estA translation repression complex
Classification: RNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-12-04
Authors: Dendooven, T., Luisi, B.F.
PDB entry 8bvk: The crystal structure of O-glycoside cleaving beta-eliminase from A. tumefaciens AtOGE
Classification: HYDROLASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-04
Authors: Kuhlmann, K., Bitter, J., Pfeiffer, M., Nidetzky, B., Pavkov-Keller, T.
PDB entry 8bvl: Crystal structure of the IBR-RING2 domain of HOIL-1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2022-12-04
Authors: Stieglitz, B., Koliopoulos, M.G., Rittinger, K.
PDB entry 8bvm: Cryo-EM structure of Hfq-Crc-rbsB translation repression complex
Classification: RNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-12-04
Authors: Dendooven, T., Luisi, B.F.
PDB entry 8bvo: Titin I110-I111 FnIII tandem from the MIR region (I/A5-I/A6)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-12-05
Authors: Mayans, O., Fleming, J.R., Williams, R.
PDB entry 8bvp: Crystal structure of an N-terminal fragment of the effector protein Lpg2504 (SidI) from Legionella pneumophila
Classification: PROTEIN BINDING
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-05
Authors: Machtens, D.A., Willerding, J.M., Eschenburg, S., Reubold, T.F.
PDB entry 8bvq: E. coli BAM complex (BamABCDE) bound to darobactin B
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Photorhabdus heterorhabditis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-12-05
Authors: Horne, J.E., Fenn, K.L., Radford, S.E., Ranson, N.A.
PDB entry 8bvr: Cryo-EM structure of rat SLC22A6 in the apo state
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2022-12-05
Authors: Parker, J.L., Kato, T., Newstead, S.
PDB entry 8bvs: Cryo-EM structure of rat SLC22A6 bound to tenofovir
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2022-12-05
Authors: Parker, J.L., Kato, T., Newstead, S.
PDB entry 8bvt: Cryo-EM structure of rat SLC22A6 bound to probenecid
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2022-12-06
Authors: Parker, J.L., Kato, T., Newstead, S.
PDB entry 8bvw: RNA polymerase II pre-initiation complex with the distal +1 nucleosome (PIC-Nuc18W)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-12-20
Authors: Abril-Garrido, J., Dienemann, C., Grabbe, F., Velychko, T., Lidschreiber, M., Wang, H., Cramer, P.
PDB entry 8bvx: Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH13264
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-12-05
Authors: Scaletti, E., Stenmark, P.
PDB entry 8bvz: Spatial structure of amyloidogenic SEM1(49-67) peptide
Classification: PROTEIN FIBRIL
Experimental method: SOLUTION NMR
Deposited: 2022-12-06
Authors: Semenova, E.A., Yulmetov, A.R., Osetrina, D.A., Blokhin, D.S.
PDB entry 8bw0: Structure of CEACAM5 A3-B3 domain in Complex with Tusamitamab Fab
Classification: CELL ADHESION
Source organism: Homo sapiens; Mus sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2022-12-06
Authors: Kumar, A., Bertrand, T., Rapisarda, C., Rak, A.
PDB entry 8bw1: Yeast 20S proteasome in complex with an engineered fellutamide derivative (C14QAL)
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2022-12-06
Authors: Bozhueyuek, K.A.J., Praeve, L., Kegler, C., Kaiser, S., Shi, Y., Kuttenlochner, W., Schenk, L., Groll, M., Hochberg, G.K.A., Bode, H.B.
PDB entry 8bw2: PanDDA analysis -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-12-06
Authors: Grosjean, H., Aimon, A., Hassell-Hart, S., Bradshaw, W.J., Krojer, T., Talon, R., Douangamath, A., Koekemoer, L., Biggin, P.C., Spencer, J., von Delft, F.
PDB entry 8bw3: PanDDA analysis -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-12-06
Authors: Grosjean, H., Aimon, A., Hassell-Hart, S., Bradshaw, W.J., Krojer, T., Talon, R., Douangamath, A., Koekemoer, L., Biggin, P.C., Spencer, J., von Delft, F.
PDB entry 8bw4: PanDDA analysis -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-12-06
Authors: Grosjean, H., Aimon, A., Hassell-Hart, S., Bradshaw, W.J., Krojer, T., Talon, R., Douangamath, A., Koekemoer, L., Biggin, P.C., Spencer, J., von Delft, F.
PDB entry 8bw5: X-ray structure of the complex between human alpha thrombin and the duplex/quadruplex aptamer M08s-1_41mer
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-12-06
Authors: Troisi, R., Napolitano, V., Sica, F.
PDB entry 8bw6: Titin FnIII-domain I110 (I/A6) from the MIR region
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-12-06
Authors: Mayans, O., Fleming, J.R.
PDB entry 8bw7: Cryo-EM structure of rat SLC22A6 bound to alpha-ketoglutaric acid
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2022-12-06
Authors: Parker, J.L., Kato, T., Newstead, S.
PDB entry 8bw8: Crystal structure of the dCNK-SAM-CRIC-PDZ/dHYP-SAM complex
Classification: SIGNALING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-06
Authors: Maisonneuve, P., Kurinov, I., Sicheri, F.
PDB entry 8bw9: Cryo-EM structure of the RAF activating complex KSR-MEK-CNK-HYP
Classification: SIGNALING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2022-12-06
Authors: Maisonneuve, P., Fronzes, R., Sicheri, F.
PDB entry 8bwa: Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1) in complex with platinum
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.61 Å
Deposited: 2022-12-06
Authors: Malinauskas, T., Rudolf, A.F., Moore, G., Eggington, H., Belnoue-Davis, H., El Omari, K., Woolley, R.E., Griffiths, S.C., Duman, R., Wagner, A., Leedham, S.J., Baldock, C., Ashe, H., Siebold, C.
PDB entry 8bwb: Spider toxin Pha1b (PnTx3-6) from Phoneutria nigriventer targeting CaV2.x calcium channels and TRPA1 channel
Classification: TOXIN
Source organism: Phoneutria nigriventer
Experimental method: SOLUTION NMR
Deposited: 2022-12-06
Authors: Mironov, P.A., Chernaya, E.M., Paramonov, A.S., Shenkarev, Z.O.
PDB entry 8bwc: E. coli BAM complex (BamABCDE) wild-type
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-12-06
Authors: Machin, J.M., Radford, S.E., Ranson, N.A.
PDB entry 8bwd: Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1), crystal form 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2022-12-06
Authors: Malinauskas, T., Rudolf, A.F., Moore, G., Eggington, H., Belnoue-Davis, H., El Omari, K., Woolley, R.E., Griffiths, S.C., Duman, R., Wagner, A., Leedham, S.J., Baldock, C., Ashe, H., Siebold, C.
PDB entry 8bwe: Small molecule stabilizer for 14-3-3/ChREBP (Cmd 43)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-06
Authors: Visser, E.J., Pennings, M.A.M., Ottmann, C.
PDB entry 8bwf: PTBP1 RRM1 bound to an allosteric inhibitor
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-12-06
Authors: Schmeing, S., Vetter, I., t Hart, P., Gasper, R.
PDB entry 8bwg: HRas (1-166) Y64 phosphorylation
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2022-12-06
Authors: Baumann, P., Jin, Y.
PDB entry 8bwh: Small molecule stabilizer for 14-3-3/ChREBP (Cmd 42)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-06
Authors: Pennings, M.A.M., Visser, E.J., Ottmann, C.
PDB entry 8bwi: Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1), crystal form 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2022-12-06
Authors: Malinauskas, T., Rudolf, A.F., Moore, G., Eggington, H., Belnoue-Davis, H., El Omari, K., Woolley, R.E., Griffiths, S.C., Duman, R., Wagner, A., Leedham, S.J., Baldock, C., Ashe, H., Siebold, C.
PDB entry 8bwj: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074386)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-06
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bwk: Metagenomic derived PL6 alginate lyase
Classification: LYASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-12-06
Authors: Angen, E.F., Wilkens, C.
PDB entry 8bwl: Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1) in complex with human Growth Differentiation factor 5 (GDF5) and calcium
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-12-06
Authors: Malinauskas, T., Rudolf, A.F., Moore, G., Eggington, H., Belnoue-Davis, H., El Omari, K., Woolley, R.E., Griffiths, S.C., Duman, R., Wagner, A., Leedham, S.J., Baldock, C., Ashe, H., Siebold, C.
PDB entry 8bwm: Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1) in complex with human Growth Differentiation factor 5 (GDF5) and calcium, long-wavelength X-ray dataset (4042 eV)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-12-07
Authors: Malinauskas, T., Rudolf, A.F., Moore, G., Eggington, H., Belnoue-Davis, H., El Omari, K., Woolley, R.E., Griffiths, S.C., Duman, R., Wagner, A., Leedham, S.J., Baldock, C., Ashe, H., Siebold, C.
PDB entry 8bwn: Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1) in complex with human Growth Differentiation Factor 5 (GDF5) and calcium, long-wavelength X-ray dataset (4010 eV)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2022-12-07
Authors: Malinauskas, T., Rudolf, A.F., Moore, G., Eggington, H., Belnoue-Davis, H., El Omari, K., Woolley, R.E., Griffiths, S.C., Duman, R., Wagner, A., Leedham, S.J., Baldock, C., Ashe, H., Siebold, C.
PDB entry 8bwo: Cryo-EM structure of nanodisc-reconstituted human MRP4 with E1202Q mutation (outward-facing occluded conformation)
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-12-07
Authors: Raj, I., Bloch, M., Pape, T.H., Taylor, N.M.I.
PDB entry 8bwp: Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (in complex with methotrexate)
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-12-07
Authors: Raj, I., Bloch, M., Pape, T.H., Taylor, N.M.I.
PDB entry 8bwq: Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (in complex with topotecan)
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-12-07
Authors: Raj, I., Bloch, M., Pape, T.H., Taylor, N.M.I.
PDB entry 8bwr: Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (in complex with prostaglandin E2)
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-12-07
Authors: Raj, I., Bloch, M., Pape, T.H., Taylor, N.M.I.
PDB entry 8bws: Structure of yeast RNA Polymerase III elongation complex at 3.3 A
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-12-07
Authors: Nguyen, P.Q., Fernandez-Tornero, C.
PDB entry 8bwt: Structure of a symmetrical internal loop motif with three consecutive U:U mismatches from stem-loop 1 in the 3'-UTR of the SARS-CoV2 genomic RNA
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2022-12-07
Authors: Voegele, J., Duchardt-Ferner, E., Schwalbe, H., Woehnert, J.
PDB entry 8bwu: Crystal structure of SARS-CoV-2 nsp14 methyltransferase domain in complex with the SS148 inhibitor
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2022-12-07
Authors: Konkolova, E., Klima, M., Boura, E., Jin, J., Kaniskan, H.U., Han, Y., Vedadi, M.
PDB entry 8bwv: Crystal Structure of SilF Cu(I)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-07
Authors: Lithgo, R.M., Carr, S.B., Scott, D.J., Quigley, A.
PDB entry 8bww: Targeting Toll-like receptor-driven systemic inflammation by engineering an innate structural fold into drugs
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-12-07
Authors: Diehl, C.
PDB entry 8bwx: Fragment-linked stabilizer for 14-3-3 and ERa (1075298)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-07
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bwy: In situ outer dynein arm from Chlamydomonas reinhardtii in a pre-power stroke state
Classification: MOTOR PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 38 Å
Deposited: 2022-12-07
Authors: Zimmermann, N.E.L., Noga, A., Obbineni, J.M., Ishikawa, T.
PDB entry 8bwz: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074393)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-07
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bx0: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074388)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-07
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bx1: Oct4/Sox2 protein:DNA complex
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-12-07
Authors: Chojnowski, G., Wilmanns, M., Round, E.
PDB entry 8bx2: Oct4/Sox2 protein:DNA complex
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2022-12-07
Authors: Chojnowski, G., Wilmanns, M., Round, E.
PDB entry 8bx3: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074372)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-12-07
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bx4: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074392)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-07
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bx5: Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (dataset 1)
Classification: MEMBRANE PROTEIN
Source organism: Alvinella pompejana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-12-07
Authors: De Gieter, S., Efremov, R.G., Ulens, C.
PDB entry 8bx6: Crystal structure of JAK2 JH1 in complex with cerdulatinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-12-08
Authors: Haikarainen, T.
PDB entry 8bx7: Structure of the rod CNG channel bound to calmodulin
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2022-12-08
Authors: Marino, J.
PDB entry 8bx8: In situ outer dynein arm from Chlamydomonas reinhardtii in the post-power stroke state
Classification: MOTOR PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 30.3 Å
Deposited: 2022-12-08
Authors: Zimmermann, N.E.L., Noga, A., Obbineni, J.M., Ishikawa, T.
PDB entry 8bx9: Crystal structure of JAK2 JH1 in complex with ilginatinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-12-08
Authors: Haikarainen, T.
PDB entry 8bxa: Crystal structure of ribosome binding factor A (RbfA) from S. aureus
Classification: RIBOSOME
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-12-08
Authors: Fatkhullin, B., Bikmullin, A., Gabdulkhakov, A., Khusainov, I., Validov, S., Usachev, K., Yusupov, M.
PDB entry 8bxb: Alvinella pompejana nicotinic acetylcholine receptor Alpo in apo state (dataset 2)
Classification: MEMBRANE PROTEIN
Source organism: Alvinella pompejana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-12-08
Authors: De Gieter, S., Efremov, R.G., Ulens, C.
PDB entry 8bxc: Crystal structure of JAK2 JH1 in complex with itacitinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-12-08
Authors: Haikarainen, T.
PDB entry 8bxd: Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (Alpo4_LMNG_Serotonin dataset 4)
Classification: MEMBRANE PROTEIN
Source organism: Alvinella pompejana
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2022-12-08
Authors: De Gieter, S., Efremov, R.G., Ulens, C.
PDB entry 8bxe: Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (Alpo4_comb dataset 3)
Classification: MEMBRANE PROTEIN
Source organism: Alvinella pompejana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-12-08
Authors: De Gieter, S., Efremov, R.G., Ulens, C.
PDB entry 8bxf: Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in apo state (Alpo4_apo, dataset 1)
Classification: MEMBRANE PROTEIN
Source organism: Alvinella pompejana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-12-08
Authors: De Gieter, S., Efremov, R.G., Ulens, C.
PDB entry 8bxg: Structure of the K/H exchanger KefC.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2022-12-08
Authors: Gulati, A., Drew, D.
PDB entry 8bxh: Crystal structure of JAK2 JH1 in complex with momelotinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-12-08
Authors: Haikarainen, T.
PDB entry 8bxi: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074361)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-12-08
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bxj: apo structure of the specific silver chaperone needed for bacterial silver resistance
Classification: METAL BINDING PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: SOLUTION NMR
Deposited: 2022-12-08
Authors: Monneau, Y.R., Walker, O., Hologne, M.
PDB entry 8bxk: Ntaya virus methyltransferase
Classification: TRANSFERASE
Source organism: Ntaya virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2022-12-09
Authors: Boura, E., Krafcikova, P.
PDB entry 8bxl: Patulin Synthase from Penicillium expansum
Classification: FLAVOPROTEIN
Source organism: Penicillium expansum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-12-09
Authors: Tjallinks, G., Boverio, A., Rozeboom, H.J., Fraaije, M.W.
PDB entry 8bxm: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074397)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-09
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bxn: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074399)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-09
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bxo: fragment-linked stabilizer for ERa - 14-3-3 interaction (1075287)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-09
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bxp: SfGFP C148 F206 mutant
Classification: LUMINESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2022-12-09
Authors: Ahmed, R.D., Rizkallah, P.J., Jones, D.D.
PDB entry 8bxq: fragment-linked stabilizer for ERa - 14-3-3 interaction (1075296)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-09
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bxr: Titin FnIII-domain I109-I111 (I/A4-A/A6) from the MIR region
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-12-09
Authors: Mayans, O., Fleming, J.R., Williams, R.
PDB entry 8bxs: Fragment-linked stabilizer for ERa - 14-3-3 interaction (1075293)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-09
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bxt: Structure of StayGold
Classification: FLUORESCENT PROTEIN
Source organism: Cytaeis uchidae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-09
Authors: Ivorra-Molla, E., Akhuli, D., Crow, A.
PDB entry 8bxu: Crystal structure of Odorant Binding Protein 5 from Anopheles gambiae (AgamOBP5) with MPD (2-Methyl-2,4-pentanediol)
Classification: TRANSPORT PROTEIN
Source organism: Anopheles gambiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-12-09
Authors: Liggri, P.G.V., Tsitsanou, K.E., Zographos, S.E.
PDB entry 8bxv: Crystal structure of Odorant Binding Protein 5 from Anopheles gambiae (AgamOBP5) with Thymol
Classification: TRANSPORT PROTEIN
Source organism: Anopheles gambiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-12-10
Authors: Liggri, P.G.V., Tsitsanou, K.E., Zographos, S.E.
PDB entry 8bxw: Crystal structure of Odorant Binding Protein 5 from Anopheles gambiae (AgamOBP5) with Carvacrol
Classification: TRANSPORT PROTEIN
Source organism: Anopheles gambiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-12-10
Authors: Liggri, P.G.V., Tsitsanou, K.E., Zographos, S.E.
PDB entry 8bxx: Crystal structure of formate dehydrogenase FDH2 enzyme from Granulicella mallensis MP5ACTX8 in complex with NAD and azide.
Classification: OXIDOREDUCTASE
Source organism: Granulicella mallensis MP5ACTX8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-12-10
Authors: Robescu, M.S., Rubini, R., Filippini, F., Bergantino, B., Cendron, L.
PDB entry 8bxy: FimH in complex with alpha1,6 core-fucosylated oligomannose-3, crystallized in the trigonal space group
Classification: CELL ADHESION
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-12-11
Authors: Bridot, C., Bouckaert, J., Krammer, E.-M.
PDB entry 8bxz: Crystal structure of Paradendryphiella salina PL7C alginate lyase mutant Y220F in complex with penta-mannuronic acid
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-12-11
Authors: Wilkens, C.
PDB entry 8by0: streptavidin mutant S112I K121R with an iridium catalyst for CH activation
Classification: UNKNOWN FUNCTION
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-11
Authors: Igareta, N.V., Ward, T.R.
PDB entry 8by1: streptavidin with an iridium catalyst for CH activation
Classification: UNKNOWN FUNCTION
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.486 Å
Deposited: 2022-12-11
Authors: Igareta, N.V., Ward, T.R.
PDB entry 8by2: Structure of the K+/H+ exchanger KefC with GSH.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2022-12-11
Authors: Gulati, A., Drew, D.
PDB entry 8by3: FimH lectin domain in complex with oligomannose-6
Classification: CELL ADHESION
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.186 Å
Deposited: 2022-12-11
Authors: Bouckaert, J., Bourenkov, G.P.
PDB entry 8by4: Crystal structure of Odorant Binding Protein 1 from Aedes albopictus (Asian tiger mosquito)
Classification: TRANSPORT PROTEIN
Source organism: Aedes albopictus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-12
Authors: Liggri, P.G.V., Tsitsanou, K.E., Zographos, S.E.
PDB entry 8by6: Structure of the human nuclear cap-binding complex bound to NCBP3(560-620) and cap-analogue m7GpppG
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2022-12-12
Authors: Dubiez, E., Pellegrini, E., Foucher, A.E., Cusack, S., Kadlec, J.
PDB entry 8by8: The cercosporin fungal non-reducing polyketide synthase (NR-PKS) CTB1 (SAT-KS-MAT)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Cercospora nicotianae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-12-12
Authors: Munoz-Hernandez, H., Maier, T.
PDB entry 8by9: fragment-linked stabilizer for ERa - 14-3-3 interaction (1075292)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-12
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bya: Cryo-EM structure of SKP1-SKP2-CKS1-CDK2-CyclinA-p27KIP1 Complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2022-12-12
Authors: Rowland, R.J., Salamina, M., Endicott, J.A., Noble, M.E.
PDB entry 8byb: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074398)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-12
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8byc: fragment-linked stabilizer for ERa - 14-3-3 interaction (1075316)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-12
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8byd: fragment-linked stabilizer for ERa - 14-3-3 interactions (1075288)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-12
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8bye: fragment-linked stabilizer for ERa - 14-3-3 interaction (1075313)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-12
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8byf: fragment-linked stabilizer for ERa - 14-3-3 interaction (1047455)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-12-12
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8byg: fragment-linked stabilizer for ERa - 14-3-3 interaction (1047648)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-12
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8byh: Crystal structure of TrmD domain from Calditerrivibrio nitroreducens in complex with S-adenosyl-L-methionine
Classification: TRANSFERASE
Source organism: Calditerrivibrio nitroreducens DSM 19672
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-12-12
Authors: Kluza, A., Lewandowska, I., Sulkowska, J.
PDB entry 8byi: Alvinella pompejana nicotinic acetylcholine receptor Alpo4 in complex with CHAPS(Alpo4_CHAPS)
Classification: MEMBRANE PROTEIN
Source organism: Alvinella pompejana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-12-13
Authors: De Gieter, S., Efremov, R.G., Ulens, C.
PDB entry 8byj: The structures of Ace2 in complex with bicyclic peptide inhibitor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2022-12-13
Authors: Brear, P., Lulla, A., Harman, M., Dods, R., Chen, L., Bezerra, G., Demydchuk, Y., Stanway, S., Hyvonen, M.
PDB entry 8byk: The structure of MadC from Clostridium maddingley reveals new insights into class I lanthipeptide cyclases
Classification: BIOSYNTHETIC PROTEIN
Source organism: Clostridium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-13
Authors: Knospe, C.V., Kamel, M., Spitz, O., Hoeppner, A., Galle, S., Reiners, J., Kedrov, A., Smits, S.H., Schmitt, L.
PDB entry 8byl: Cryo-EM structure of SKP1-SKP2-CKS1 from the SCFSKP2 E3 ligase complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-12-13
Authors: Rowland, R.J., Salamina, M., Endicott, J.A., Noble, M.E.M.
PDB entry 8bym: Outer membrane attachment porin OmpM1 from Veillonella parvula
Classification: MEMBRANE PROTEIN
Source organism: Veillonella parvula
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2022-12-13
Authors: Silale, A., van den Berg, B.
PDB entry 8byn: Chronic traumatic encephalopathy tau filaments with PET ligand flortaucipir
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-12-13
Authors: Shi, Y., Ghetti, B., Goedert, M., Scheres, S.H.W.
PDB entry 8byo: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074361)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-01-18
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8byp: Botulinum neurotoxin serotype X in complex with NTNH/X
Classification: TOXIN
Source organism: Clostridium botulinum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2022-12-15
Authors: Martinez-Carranza, M., Skerlova, J., Stenmark, P.
PDB entry 8byq: RNA polymerase II pre-initiation complex with the proximal +1 nucleosome (PIC-Nuc10W)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-12-14
Authors: Abril-Garrido, J., Dienemann, C., Grabbe, F., Velychko, T., Lidschreiber, M., Wang, H., Cramer, P.
PDB entry 8byr: Crystal structure of MoaB2 protein from Mycobacterium smegmatis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2022-12-21
Authors: Narasimhan, S., Sanderova, H., Zidek, L., Krasny, L.
PDB entry 8bys: Outer membrane attachment porin OmpM1 from Veillonella parvula, native
Classification: MEMBRANE PROTEIN
Source organism: Veillonella parvula
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2022-12-13
Authors: Silale, A., van den Berg, B.
PDB entry 8byt: Outer membrane attachment porin OmpM1 from Veillonella parvula, C3 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Veillonella parvula
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2022-12-13
Authors: Silale, A., van den Berg, B.
PDB entry 8byu: Crystal Structure of HexaBody-CD38 Fab in complex with CD38
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-12-14
Authors: Freier, R., Krapp, S., Hibbert, R.G.
PDB entry 8byv: Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex
Classification: RIBOSOME
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2022-12-14
Authors: Bikmullin, A.G., Fatkhullin, B., Stetsenko, A., Guskov, A., Yusupov, M.
PDB entry 8byw: Rut B structure
Classification: HYDROLASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2022-12-14
Authors: Rajendran, C., Sterner, R., Busch, M.
PDB entry 8byx: HOXB13-homodimer bound to DNA
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-12-14
Authors: Morgunova, E., Popov, A., Yin, Y., Taipale, J.
PDB entry 8byy: fragment-linked stabilizer for ERa - 14-3-3 interaction (1074395)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8byz: fragment-linked stabilizer for ERa - 14-3-3 interaction (AZ210)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8bz0: single soak stabilizer for ERa - 14-3-3 interaction (AZ275)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8bz1: RNA polymerase II core pre-initiation complex with the proximal +1 nucleosome (cPIC-Nuc10W)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-12-14
Authors: Abril-Garrido, J., Dienemann, C., Grabbe, F., Velychko, T., Lidschreiber, M., Wang, H., Cramer, P.
PDB entry 8bz2: Crystal structure of outer membrane attachment porin OmpM1 SLH domain
Classification: STRUCTURAL PROTEIN
Source organism: Veillonella parvula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-14
Authors: Silale, A., van den Berg, B.
PDB entry 8bz3: Structure od the carbohydrate reconition domain of Gal3 in comples with SAF-2-010
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2022-12-14
Authors: Medrano, F.J., Romero, A.
PDB entry 8bz4: Crystal structure of the apo form of the L. monocytogenes RmlT
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2022-12-14
Authors: Cereija, T.B., Morais-Cabral, J.H.
PDB entry 8bz5: Crystal structure of the L. monocytogenes RmlT in complex with HEPES
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-12-14
Authors: Cereija, T.B., Morais-Cabral, J.H.
PDB entry 8bz6: Crystal structure of the L. monocytogenes RmlT in complex with UDP-glucose
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-12-14
Authors: Cereija, T.B., Morais-Cabral, J.H.
PDB entry 8bz7: Crystal structure of the L. monocytogenes RmlT in complex with TDP-rhamnose
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-14
Authors: Cereija, T.B., Morais-Cabral, J.H.
PDB entry 8bz8: Crystal structure of the L. monocytogenes RmlT D198A variant in complex with TDP-rhamnose
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2022-12-14
Authors: Cereija, T.B., Morais-Cabral, J.H.
PDB entry 8bz9: single soak stabilizer for ERa - 14-3-3 interaction (AZ354)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8bza: single soak stabilizer for ERa - 14-3-3 interaction (AZ555)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8bzb: co-soak stabilizers for ERa - 14-3-3 interaction (884_AZ275)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8bzc: co-soaked stabilizers for ERa - 14-3-3 interaction (884_AZ244)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8bzd: deAc-FC stabilizer of 14-3-3 and ERalpha
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Ottmann, C.
PDB entry 8bze: FC-J stabilizer for ERa and 14-3-3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Ottmann, C.
PDB entry 8bzf: FC-J acetonide stabilizer of 14-3-3 and ERalpha
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Ottmann, C.
PDB entry 8bzg: FC-31 stabilizer of 14-3-3 and ERalpha
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Ottmann, C.
PDB entry 8bzh: FC-NAc stabilizer of 14-3-3 and ERalpha
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2022-12-14
Authors: Visser, E.J., Ottmann, C.