LiteFold/PDB huggingface dataset:
PDB entry 8p32: BB0238 from Borrelia burgdorferi, Se-Met data for Leu240Met mutant
Classification: MEMBRANE PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-05-16
Authors: Brangulis, K., Foor, S.D., Shakya, A.K., Rana, V.S., Bista, S., Kitsou, C., Ronzetti, M., Linden, S.B., Altieri, A.S., Akopjana, I., Baljinnyam, B., Nelson, D.C., Simeonov, A., Herzberg, O., Caimano, M.J., Pal, U.
PDB entry 8p33: BB0238 from Borrelia burgdorferi
Classification: MEMBRANE PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-05-16
Authors: Brangulis, K., Foor, S.D., Shakya, A.K., Rana, V.S., Bista, S., Kitsou, C., Ronzetti, M., Linden, S.B., Altieri, A.S., Akopjana, I., Baljinnyam, B., Nelson, D.C., Simeonov, A., Herzberg, O., Caimano, M.J., Pal, U.
PDB entry 8p34: Tau filaments extracted from human brain with the DeltaK281 mutation in MAPT
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2023-05-17
Authors: Schweighauser, M., Garringer, H.J., Klingstedt, T., Masuda-Suzukake, M., Murrell, J.R., Vidal, R., Scheres, S.H.W., Goedert, M., Ghetti, B., Newell, K.L.
PDB entry 8p35: Mutant human titin immunoglobulin-like 21 domain - C3575S
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-05-17
Authors: Martinez-Martin, I., Crousilles, A., Mortensen, S.A., Alegre-Cebollada, J., Wilmanns, M.
PDB entry 8p36: Neisseria meningitidis Type IV pilus SB-DATDH variant
Classification: PROTEIN FIBRIL
Source organism: Neisseria meningitidis 8013
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2023-05-17
Authors: Fernandez-Martinez, D., Dumenil, G.
PDB entry 8p37: Structure a catalytically inactive mutant of the IMP dehydrogenase related protein GUAB3 from Synechocystis PCC 6803
Classification: BIOSYNTHETIC PROTEIN
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 1.219 Å
Deposited: 2023-05-17
Authors: Hernandez-Gomez, A., Fernandez-Justel, D., Buey, R.M.
PDB entry 8p39: Cryo-EM structure of the anaerobic ribonucleotide reductase from Prevotella copri in its dimeric, dGTP/ATP-bound state
Classification: BIOSYNTHETIC PROTEIN
Source organism: Segatella copri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2023-05-17
Authors: Bimai, O., Banerjee, I., Sjoberg, B.M., Logan, D.T.
PDB entry 8p3a: bacteriophage T5 l-alanoyl-d-glutamate peptidase Zn2+/Ca2+ form
Classification: ANTIMICROBIAL PROTEIN
Source organism: Escherichia phage T5
Experimental method: SOLUTION NMR
Deposited: 2023-05-17
Authors: Prokhorov, D.A., Kutyshenko, V.P., Mikoulinskaia, G.V.
PDB entry 8p3b: Neisseria meningitidis Type IV pilus SA-GATDH variant
Classification: PROTEIN FIBRIL
Source organism: Neisseria meningitidis 8013
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2023-05-17
Authors: Fernandez-Martinez, D., Dumenil, G.
PDB entry 8p3c: Full length structure of BpMIP with bound inhibitor NJS227.
Classification: STRUCTURAL PROTEIN
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2023-05-17
Authors: Whittaker, J.J., Guskov, A., Goretzki, B., Hellmich, U.A.
PDB entry 8p3d: Full length structure of TcMIP with bound inhibitor NJS224.
Classification: STRUCTURAL PROTEIN
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2023-05-17
Authors: Whittaker, J.J., Guskov, A., Goretzki, B., Hellmich, U.A.
PDB entry 8p3e: Crystal structure of glucocerebrosidase in complex with allosteric activator
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-05-17
Authors: Schulze, M.-S.
PDB entry 8p3g: Fusion hSlp2-a_Rab27A bound to covalent hit fragment IMP-1704
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2023-05-17
Authors: De Vita, E., Brustur, D., Tersa, M., Petracca, R., Morgan, R.M.L., Lanyon-Hogg, T., Norman, J.C., Cota, E., Tate, E.W.
PDB entry 8p3h: Fusion hSlp2-a_Rab27A bound to covalent hit fragment IMP-1712
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2023-05-17
Authors: De Vita, E., Brustur, D., Tersa, M., Petracca, R., Morgan, R.M.L., Lanyon-Hogg, T., Norman, J.C., Cota, E., Tate, E.W.
PDB entry 8p3i: Fusion hSlp2-a_Rab27A bound to covalent hit fragment IMP-1721
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-17
Authors: De Vita, E., Brustur, D., Tersa, M., Petracca, R., Morgan, R.M.L., Lanyon-Hogg, T., Norman, J.C., Cota, E., Tate, E.W.
PDB entry 8p3j: Fusion hSlp2-a_Rab27A non-covalent complex with hit fragment IMP-1704
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2023-05-17
Authors: De Vita, E., Brustur, D., Tersa, M., Petracca, R., Morgan, R.M.L., Lanyon-Hogg, T., Norman, J.C., Cota, E., Tate, E.W.
PDB entry 8p3k: Fusion hSlp2-a_Rab27A non-covalent complex with compound IMP-2505
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2023-05-17
Authors: De Vita, E., Brustur, D., Tersa, M., Petracca, R., Morgan, R.M.L., Lanyon-Hogg, T., Norman, J.C., Cota, E., Tate, E.W.
PDB entry 8p3l: The structure of thiocyanate dehydrogenase mutant form with Thr 169 replaced by Ala from Thioalkalivibrio paradoxus
Classification: OXIDOREDUCTASE
Source organism: Thioalkalivibrio paradoxus ARh 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-05-18
Authors: Varfolomeeva, L.A., Polyakov, K.M., Komolov, A.S., Rakitina, T.V., Dergousova, N.I., Dorovatovskii, P.V., Boyko, K.M., Tikhonova, T.V., Popov, V.O.
PDB entry 8p3m: The structure of thiocyanate dehydrogenase mutant form with Lys 281 replaced by Ala from Thioalkalivibrio paradoxus
Classification: OXIDOREDUCTASE
Source organism: Thioalkalivibrio paradoxus ARh 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2023-05-18
Authors: Varfolomeeva, L.A., Polyakov, K.M., Komolov, A.S., Rakitina, T.V., Dergousova, N.I., Dorovatovskii, P.V., Boyko, K.M., Tikhonova, T.V., Popov, V.O.
PDB entry 8p3n: Structure of the Histidine Kinase CheA ATP-Binding domain in complex with compound ODDHK8
Classification: SIGNALING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-18
Authors: Adhav, A., Marina, A.
PDB entry 8p3o: Full-length bacterial polysaccharide co-polymerase WzzE mutant R267A from E. coli. C4 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-18
Authors: Wiseman, B., Hogbom, M.
PDB entry 8p3p: Full-length bacterial polysaccharide co-polymerase WzzE mutant R267E from E. coli. C4 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-05-18
Authors: Wiseman, B., Hogbom, M.
PDB entry 8p3q: Homomeric GluA2 flip R/G-unedited Q/R-edited F231A mutant in tandem with TARP gamma-2, desensitized conformation 3
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-05-18
Authors: Zhang, D., Krieger, J.M., Yamashita, K., Greger, I.
PDB entry 8p3r: Structure of the Histidine Kinase CheA ATP-Binding domain in complex with compound ODDHK4
Classification: SIGNALING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-18
Authors: Adhav, A., Marina, A.
PDB entry 8p3s: Homomeric GluA2 flip R/G-unedited Q/R-edited F231A mutant in tandem with TARP gamma-2, desensitized conformation 2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-05-18
Authors: Zhang, D., Krieger, J.M., Yamashita, K., Greger, I.
PDB entry 8p3t: Homomeric GluA1 in tandem with TARP gamma-3, desensitized conformation 1
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2023-05-18
Authors: Zhang, D., Krieger, J., Yamashita, K., Greger, I.
PDB entry 8p3u: Homomeric GluA1 in tandem with TARP gamma-3, desensitized conformation 2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2023-05-18
Authors: Zhang, D., Krieger, J.M., Greger, I.H.
PDB entry 8p3v: Homomeric GluA1 in tandem with TARP gamma-3, desensitized conformation 3
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2023-05-18
Authors: Zhang, D., Krieger, J.M., Yamashita, K., Greger, I.H.
PDB entry 8p3w: Homomeric GluA1 in tandem with TARP gamma-3, desensitized conformation 4
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2023-05-18
Authors: Zhang, D., Krieger, J.M., Yamashita, K., Greger, I.
PDB entry 8p3x: Homomeric GluA2 flip R/G-edited Q/R-edited F231A mutant in tandem with TARP gamma-2, desensitized conformation 1
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-05-18
Authors: Krieger, J.M., Zhang, D., Yamashita, K., Greger, I.H.
PDB entry 8p3y: Homomeric GluA2 flip R/G-edited Q/R-edited F231A mutant in tandem with TARP gamma-2, desensitized conformation 3
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2023-05-18
Authors: Krieger, J.M., Zhang, D., Yamashita, K., Greger, I.H.
PDB entry 8p3z: Homomeric GluA2 flip R/G-edited Q/R-edited F231A mutant in tandem with TARP gamma-2, desensitized conformation 2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2023-05-18
Authors: Krieger, J.M., Zhang, D., Yamashita, K., Greger, I.H.
PDB entry 8p41: Crystal structure of glucocerebrosidase in complex with allosteric activator
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-05-18
Authors: Schulze, M.-S.
PDB entry 8p42: Full length structure of TcMIP with bound inhibitor NJS227.
Classification: STRUCTURAL PROTEIN
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2023-05-19
Authors: Whittaker, J.J., Guskov, A., Goretzki, B., Hellmich, U.A.
PDB entry 8p43: Structure of the MHC class Ib molecule Qa-1b in complex with Q001 peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-05-19
Authors: Sala, B.M., Achour, A.
PDB entry 8p44: Crystal structure of monkeypox virus poxin in complex with the STING agonist MD1202D
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-05-19
Authors: Duchoslav, V., Klima, M., Boura, E.
PDB entry 8p45: Crystal structure of human STING in complex with the agonist MD1202D
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.23 Å
Deposited: 2023-05-19
Authors: Klima, M., Boura, E.
PDB entry 8p46: IPNS variant N252D in complex with Fe and IPN after O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-05-19
Authors: Rabe, P., Schofield, C.J.
PDB entry 8p47: IPNS variant N252A in complex with Fe and ACV under anaerobic conditions
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-05-19
Authors: Rabe, P., Schofield, C.J.
PDB entry 8p48: IPNS variant N252D in complex with Fe and ACV under anaerobic conditions
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-05-19
Authors: Rabe, P., Schofield, C.J.
PDB entry 8p49: Uncharacterized Q8U0N8 protein from Pyrococcus furiosus
Classification: UNKNOWN FUNCTION
Source organism: Pyrococcus furiosus DSM 3638
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-05-19
Authors: Pacesa, M., Correia, B.E., Levy, E.D.
PDB entry 8p4a: Structural insights into human co-transcriptional capping - structure 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-05-20
Authors: Garg, G., Dienemann, C., Farnung, L., Schwarz, J., Linden, A., Urlaub, H., Cramer, P.
PDB entry 8p4b: Structural insights into human co-transcriptional capping - structure 2
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-05-20
Authors: Garg, G., Dienemann, C., Farnung, L., Schwarz, J., Linden, A., Urlaub, H., Cramer, P.
PDB entry 8p4c: Structural insights into human co-transcriptional capping - structure 3
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-05-20
Authors: Garg, G., Dienemann, C., Farnung, L., Schwarz, J., Linden, A., Urlaub, H., Cramer, P.
PDB entry 8p4d: Structural insights into human co-transcriptional capping - structure 4
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-05-20
Authors: Garg, G., Dienemann, C., Farnung, L., Schwarz, J., Linden, A., Urlaub, H., Cramer, P.
PDB entry 8p4e: Structural insights into human co-transcriptional capping - structure 5
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-05-20
Authors: Garg, G., Dienemann, C., Farnung, L., Schwarz, J., Linden, A., Urlaub, H., Cramer, P.
PDB entry 8p4f: Structural insights into human co-transcriptional capping - structure 6
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-05-20
Authors: Garg, G., Dienemann, C., Farnung, L., Schwarz, J., Linden, A., Urlaub, H., Cramer, P.
PDB entry 8p4g: Crystal structure of a multicopper oxidase 3F3 variant from Pyrobaculum aerophilum
Classification: OXIDOREDUCTASE
Source organism: Pyrobaculum aerophilum str. IM2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2023-05-21
Authors: Borges, P.T., Brissos, V., Frazao, C., Martins, L.O.
PDB entry 8p4h: Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric compound IDEAYA cmpd A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2023-05-21
Authors: Thomsen, M., Thieulin-Pardo, G., Neumann, L.
PDB entry 8p4i: Cyanide dihydratase from Bacillus pumilus C1
Classification: HYDROLASE
Source organism: Bacillus pumilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.83 Å
Deposited: 2023-05-22
Authors: Mulelu, A.E., Reitz, J., van Rooyen, J.M., Scheffer, M., Frangakis, A.S., Dlamini, L.S., Woodward, J.D., Benedik, M.J., Sewell, B.T.
PDB entry 8p4j: Alpha-1-antitrypsin - Sydney variant (G192C)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2023-05-22
Authors: Kamuda, K., Lomas, D.A., Irving, J.A.
PDB entry 8p4k: Vaccinia Virus palisade layer A10 trimer
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-05-22
Authors: Datler, J., Hansen, J.M., Thader, A., Schloegl, A., Hodirnau, V.V., Schur, F.K.M.
PDB entry 8p4l: Beta-N-acetylgalactosaminidase from Niabella aurantiaca
Classification: HYDROLASE
Source organism: Niabella aurantiaca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2023-05-22
Authors: Fjermedal, S., Wilkens, C.
PDB entry 8p4m: CryoEM structure of a C7-symmetrical GroEL7-GroES7 cage in presence of ADP-BeFx
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-05-23
Authors: Wagner, J., Beck, F., Bracher, A., Caravajal, A.I., Wan, W., Bohn, S., Koerner, R., Baumeister, W., Fernandez-Busnadiego, R., Hartl, F.U.
PDB entry 8p4n: CryoEM structure of a GroEL7-GroES7 cage with encapsulated disordered substrate MetK in the presence of ADP-BeFx
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-23
Authors: Wagner, J., Beck, F., Bracher, A., Caravajal, A.I., Wan, W., Bohn, S., Koerner, R., Baumeister, W., Fernandez-Busnadiego, R., Hartl, F.U.
PDB entry 8p4o: CryoEM structure of a GroEL7-GroES7 cage with encapsulated ordered substrate MetK in the presence of ADP-BeFx
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-05-23
Authors: Wagner, J., Beck, F., Bracher, A., Caravajal, A.I., Wan, W., Bohn, S., Koerner, R., Baumeister, W., Fernandez-Busnadiego, R., Hartl, F.U.
PDB entry 8p4p: Structure average of GroEL14 complexes found in the cytosol of Escherichia coli overexpressing GroEL obtained by cryo electron tomography
Classification: CHAPERONE
Source organism: Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.6 Å
Deposited: 2023-05-23
Authors: Wagner, J., Caravajal, A.I., Beck, F., Bracher, A., Wan, W., Bohn, S., Koerner, R., Baumeister, W., Fernandez-Busnadiego, R., Hartl, F.U.
PDB entry 8p4q: Structure of the IMP dehydrogenase related protein GUAB3 from Synechocystis PCC 6803
Classification: BIOSYNTHETIC PROTEIN
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-05-23
Authors: Hernandez-Gomez, A., Fernandez-Justel, D., Buey, R.M.
PDB entry 8p4r: In situ structure average of GroEL14-GroES14 complexes in Escherichia coli cytosol obtained by cryo electron tomography
Classification: CHAPERONE
Source organism: Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.9 Å
Deposited: 2023-05-23
Authors: Wagner, J., Caravajal, A.I., Beck, F., Bracher, A., Wan, W., Bohn, S., Koerner, R., Baumeister, W., Fernandez-Busnadiego, R., Hartl, F.U.
PDB entry 8p4t: The spike complex of the Lujo Virus
Classification: VIRAL PROTEIN
Source organism: Mammarenavirus lujoense
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2023-05-23
Authors: Eilon-Ashkenazy, M., Diskin, R.
PDB entry 8p4u: Alpha-1-antitrypsin - Sydney variant (G192C)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-23
Authors: Kamuda, K., Lomas, D.A., Irving, J.A.
PDB entry 8p4v: 80S yeast ribosome in complex with HaterumaimideQ
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2023-05-23
Authors: Terrosu, S., Yusupov, M.
PDB entry 8p4w: Lactobacillus plantarum LpdD mutant - H35A
Classification: FLAVOPROTEIN
Source organism: Lactiplantibacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2023-05-23
Authors: Gahloth, D., Leys, D.
PDB entry 8p4x: FAD_ox bound dark state structure of PdLCry
Classification: FLAVOPROTEIN
Source organism: Platynereis dumerilii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.57 Å
Deposited: 2023-05-23
Authors: Behrmann, E., Behrmann, H.
PDB entry 8p4y: Coiled-coil protein origami triangle
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.052 Å
Deposited: 2023-05-23
Authors: Satler, T., Hadzi, S., Jerala, R.
PDB entry 8p4z: Crystal structure of the human CDK7 kinase domain in complex with LDC4297
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-05-23
Authors: Laursen, M., Caing-Carlsson, R., Houssari, R., Javadi, A., Kimbung, Y.R., Murina, V., Orozco-Rodriguez, J.M., Svensson, A., Welin, M., Logan, D., Svensson, B., Walse, B.
PDB entry 8p50: Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin with the C-terminal deletion in complex with Arf3
Classification: TOXIN
Source organism: Homo sapiens; Photorhabdus luminescens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.04 Å
Deposited: 2023-05-23
Authors: Belyy, A., Heilen, P., Hofnagel, O., Raunser, S.
PDB entry 8p51: Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin with the C-terminal deletion
Classification: TOXIN
Source organism: Photorhabdus luminescens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2023-05-23
Authors: Belyy, A., Heilen, P., Hofnagel, O., Raunser, S.
PDB entry 8p52: Photorhabdus luminescens Makes caterpillars floppy (Mcf) toxin
Classification: TOXIN
Source organism: Photorhabdus luminescens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-05-23
Authors: Belyy, A., Heilen, P., Hofnagel, O., Raunser, S.
PDB entry 8p53: Cryo-EM structure of the c-di-GMP-free FleQ-FleN master regulator complex of P. aeruginosa
Classification: GENE REGULATION
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-05-23
Authors: Torres-Sanchez, L., Krasteva, P.V.
PDB entry 8p54: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 150 micromolar MG-132.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-05-23
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p55: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 75 micromolar MG-132.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-23
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p56: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 150 micromolar X77.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-05-23
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p57: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 75 micromolar X77.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-05-23
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p58: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 500 micromolar X77 enantiomer R.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-05-23
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p59: Structure of the Histidine Kinase CheA ATP-Binding domain in complex with compound QUI-SV-333
Classification: SIGNALING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-05-23
Authors: Adhav, A., Marina, A.
PDB entry 8p5a: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 millimolar X77 enantiomer R.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2023-05-23
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p5b: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 500 micromolar X77 enantiomer S.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2023-05-23
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p5c: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 millimolar X77 enantiomer S.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2023-05-23
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p5d: Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averaging
Classification: RIBOSOME
Source organism: Spraguea lophii 42_110
Experimental method: ELECTRON MICROSCOPY
Resolution: 10.8 Å
Deposited: 2023-05-23
Authors: Gil Diez, P., McLaren, M., Isupov, M.N., Daum, B., Conners, R., Williams, B.
PDB entry 8p5e: S. cerevisiae nexus-sCMGE after DNA replication initiation
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-05-24
Authors: Henrikus, S.S., Willhoft, O.
PDB entry 8p5f: Human wild-type GAPDH,orthorhombic form
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-05-24
Authors: Samygina, V.R., Muronetz, V.I., Schmalhausen, E.V.
PDB entry 8p5g: Kinase domain of wild type human ULK1 in complex with compound CCT241533
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.019 Å
Deposited: 2023-05-24
Authors: Battista, T., Semrau, M.S., Heroux, A., Lolli, G., Storici, P.
PDB entry 8p5h: Kinase domain of mutant human ULK1 in complex with compound CCT241533
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.941 Å
Deposited: 2023-05-24
Authors: Battista, T., Semrau, M.S., Heroux, A., Lolli, G., Storici, P.
PDB entry 8p5i: Kinase domain of mutant human ULK1 in complex with compound XMD-17-51
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.829 Å
Deposited: 2023-05-24
Authors: Battista, T., Semrau, M.S., Heroux, A., Lolli, G., Storici, P.
PDB entry 8p5j: Kinase domain of mutant human ULK1 in complex with compound WZ4003
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.164 Å
Deposited: 2023-05-24
Authors: Battista, T., Semrau, M.S., Heroux, A., Lolli, G., Storici, P.
PDB entry 8p5k: Kinase domain of mutant human ULK1 in complex with compound MRT68921
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.209 Å
Deposited: 2023-05-24
Authors: Battista, T., Semrau, M.S., Heroux, A., Lolli, G., Storici, P.
PDB entry 8p5l: Kinase domain of mutant human ULK1 in complex with compound MRT67307
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.836 Å
Deposited: 2023-05-24
Authors: Battista, T., Semrau, M.S., Heroux, A., Lolli, G., Storici, P.
PDB entry 8p5m: SARS-CoV-2 Spike RBD in complex with Mab-23 (Fab)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-05-24
Authors: Das, H., Hallberg, B.M.
PDB entry 8p5n: Arsenate reductase (ArsC2) from Deinococcus indicus, co-crystallized with arsenate
Classification: OXIDOREDUCTASE
Source organism: Deinococcus indicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-05-24
Authors: Gouveia, A.G., Matias, P.M., Romao, C.V.
PDB entry 8p5o: Proline activating adenylation domain of gramicidin S synthetase 2 - GrsB1-Acore
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aneurinibacillus migulanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-05-24
Authors: Stephan, P., Basquin, J., Caputi, L., O'Connor, S.E., Kries, H.
PDB entry 8p5p: Structure of TECPR1 N-terminal DysF domain
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-24
Authors: Boyle, K.B., Elliott, P.R., Randow, F.
PDB entry 8p5q: Structure of an ALOG domain from Arabidopsis thaliana in complex with DNA
Classification: DNA BINDING PROTEIN
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-05-24
Authors: Zubieta, C., Nanao, M.H., Rieu, P.
PDB entry 8p5r: Crystal structure of full-length, homohexameric 2-oxoglutarate dehydrogenase KGD from Mycobacterium smegmatis in complex with GarA
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 4.562 Å
Deposited: 2023-05-24
Authors: Wagner, T., Mechaly, A.M., Alzari, P.M., Bellinzoni, M.
PDB entry 8p5s: Crystal structure of the homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 2.459 Å
Deposited: 2023-05-24
Authors: Yang, L., Boyko, A., Bellinzoni, M.
PDB entry 8p5t: Single particle cryo-EM structure of the homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.17 Å
Deposited: 2023-05-24
Authors: Yang, L., Mechaly, A.M., Bellinzoni, M.
PDB entry 8p5u: Single particle cryo-EM structure of homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum with Coenzyme A bound to the E2o domain
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.17 Å
Deposited: 2023-05-24
Authors: Yang, L., Mechaly, A.M., Bellinzoni, M.
PDB entry 8p5v: Single particle cryo-EM structure of homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum in complex with the product succinyl-CoA
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.07 Å
Deposited: 2023-05-24
Authors: Yang, L., Mechaly, A.M., Bellinzoni, M.
PDB entry 8p5w: Single particle cryo-EM structure of homohexameric 2-oxoglutarate dehydrogenase OdhA from Corynebacterium glutamicum following reaction with the 2-oxoglutarate analogue succinyl phosphonate
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.26 Å
Deposited: 2023-05-24
Authors: Yang, L., Mechaly, A.M., Bellinzoni, M.
PDB entry 8p5x: Single particle cryo-EM structure of the complex between Corynebacterium glutamicum homohexameric 2-oxoglutarate dehydrogenase OdhA and the FHA-protein inhibitor OdhI
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2023-05-24
Authors: Yang, L., Mechaly, A.M., Bellinzoni, M.
PDB entry 8p5y: Artificial transfer hydrogenase with a Mn-12 cofactor and Streptavidin S112Y-K121M mutant
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-05-24
Authors: Lau, K., Wang, W., Pojer, F., Larabi, A.
PDB entry 8p5z: Artificial transfer hydrogenase with a Mn-5 cofactor and Streptavidin S112Y-K121M mutant
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-05-24
Authors: Lau, K., Wang, W., Pojer, F., Larabi, A.
PDB entry 8p60: Spraguea lophii ribosome dimer
Classification: RIBOSOME
Source organism: Spraguea lophii 42_110
Experimental method: ELECTRON MICROSCOPY
Resolution: 14.3 Å
Deposited: 2023-05-24
Authors: Gil Diez, P., McLaren, M., Isupov, M.N., Daum, B., Conners, R., Williams, B.
PDB entry 8p61: Crystal structure of O'nyong'nyong virus capsid protease (106-256)
Classification: VIRUS
Source organism: O'nyong-nyong virus strain Gulu
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-24
Authors: Plewka, J., Chykunova, Y., Wilk, P., Sienczyk, M., Dubin, G., Pyrc, K.
PDB entry 8p62: S. cerevisiae ssDNA-sCMGE after DNA replication initiation
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-05-25
Authors: Henrikus, S.S., Willhoft, O.
PDB entry 8p63: S. cerevisiae consensus-sCMGE on ssDNA after DNA replication initiation
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-05-25
Authors: Henrikus, S.S., Willhoft, O.
PDB entry 8p64: Co-crystal structure of PD-L1 with low molecular weight inhibitor
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.312 Å
Deposited: 2023-05-25
Authors: Plewka, J., Magiera-Mularz, K., van der Straat, R., Draijer, R., Surmiak, E., Butera, R., Land, L., Musielak, B., Domling, A.
PDB entry 8p65: Cytochrome bc1 complex (Bos taurus)
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-05-25
Authors: Phillips, B.P., Barra, I.M.C.C., Meier, T.K., Rimle, L., von Ballmoos, C.
PDB entry 8p66: Structural basis of aggregate binding/recognition by the AAA+ disaggregase ClpG
Classification: CHAPERONE
Source organism: Pseudomonas aeruginosa
Experimental method: SOLUTION NMR
Deposited: 2023-05-25
Authors: Simon, B., Hennig, J., Mogk, A.
PDB entry 8p67: Crystal structure of Thermothelomyces thermophila (double mutant EE) in complex with aldotetrauronic acid
Classification: HYDROLASE
Source organism: Thermothelomyces thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2023-05-25
Authors: Dimarogona, M., Pentari, C., Kosinas, C., Topakas, E.
PDB entry 8p6a: cryo-EM structure of human SLC15A4 in outward-open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2023-05-25
Authors: Parker, J.L., Kato, T., Newstead, S.
PDB entry 8p6b: Ruthenium complex bound to a modified human telomeric sequence giving an antiparallel G-quadruplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-25
Authors: McQuaid, K.T., Cardin, C.J.
PDB entry 8p6f: Crystal structure of PorX-Fj
Classification: UNKNOWN FUNCTION
Source organism: Flavobacterium johnsoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-26
Authors: Leone, P.
PDB entry 8p6g: Crystal structure of the improved version of the Genetically Encoded Green Calcium Indicator YTnC2-5
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-05-26
Authors: Boyko, K.M., Nikolaeva, A.Y., Subach, O.M., Vlaskina, A.V., Agapova, Y.K., Popov, V.O., Subach, F.V.
PDB entry 8p6h: Bovine naive ultralong antibody AbBLV5B8* collected at 100K
Classification: IMMUNE SYSTEM
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2023-05-26
Authors: Clarke, J.D., Douangamath, A., Mikolajek, H., Stuart, D.I., Owens, R.J.
PDB entry 8p6i: Crystal structure of the 139H2 Fab fragment bound to Muc1 peptide epitope
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-26
Authors: Beugelink, J.W., Peng, W., Siborova, M., Pronker, M.F., Snijder, J., Janssen, B.J.C.
PDB entry 8p6j: Structure of the hypervariable region of Streptococcus pyogenes M3 protein in complex with a collagen peptide
Classification: PROTEIN BINDING
Source organism: Streptococcus pyogenes serotype M3; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.324 Å
Deposited: 2023-05-26
Authors: Wojnowska, M., Schwarz-Linek, U.
PDB entry 8p6k: Structure of the hypervariable region of Streptococcus pyogenes M3 protein
Classification: PROTEIN BINDING
Source organism: Streptococcus pyogenes serotype M3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.918 Å
Deposited: 2023-05-26
Authors: Wojnowska, M., Schwarz-Linek, U.
PDB entry 8p6m: Arsenate reductase (ArsC2) from Deinococcus indicus
Classification: OXIDOREDUCTASE
Source organism: Deinococcus indicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-05-26
Authors: Gouveia, A.G., Matias, P.M., Romao, C.V.
PDB entry 8p6o: Crystal structure of Paradendryphiella salina PL7C alginate lyase mutant Y220F in complex with di-mannuronic acid
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2023-05-27
Authors: Wilkens, C.
PDB entry 8p6p: Mycoplasma pneumoniae small ribosomal subunit in chloramphenicol-treated cells
Classification: TRANSLATION
Source organism: Mycoplasmoides pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-05-27
Authors: Schacherl, M., Xue, L., Spahn, C.M.T., Mahamid, J.
PDB entry 8p6q: Racemic structure of TNFR1 cysteine-rich domain
Classification: CYTOKINE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-05-28
Authors: Lander, A.J., Jin, Y., Luk, L.Y.P.
PDB entry 8p6s: Arabidopsis thaliana DGD2 in complex with UDP-galactose
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-05-29
Authors: Scaletti, E.R., Martinez-Carranza, M., Stenmark, P.
PDB entry 8p6u: Human carbonic anhydrase II containing 5-fluorotryptophanes
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-05-30
Authors: Pham, L.B.T., Costantino, A., Barbieri, L., Calderone, V., Luchinat, E., Banci, L.
PDB entry 8p6v: Cryo-EM structure of CAK in complex with inhibitor ICEC0942
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p6w: Cryo-EM structure of CAK in complex with inhibitor BS-181
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p6x: Cryo-EM structure of CAK in complex with inhibitor BS-194
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p6y: Cryo-EM structure of CAK in complex with nucleotide analogue ATPgS
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p6z: Cryo-EM structure of CAK in complex with inhibitor ICEC0510-R
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p70: Cryo-EM structure of CAK in complex with inhibitor ICEC0510-S
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p71: Cryo-EM structure of CAK in complex with inhibitor ICEC0574
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p72: Cryo-EM structure of CAK in complex with inhibitor ICEC0768
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p73: Cryo-EM structure of CAK in complex with inhibitor ICEC0829
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p74: Cryo-EM structure of CAK in complex with inhibitor ICEC0880 (ring-up conformation)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p75: Cryo-EM structure of CAK in complex with inhibitor ICEC0880 (ring-down conformation)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p76: Cryo-EM structure of CAK in complex with inhibitor ICEC0914
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p77: Cryo-EM structure of CAK in complex with inhibitor ICEC0943
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.8 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p78: Cryo-EM structure of CAK in complex with inhibitor dinaciclib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p79: Cryo-EM structure of CAK with averaged inhibitor density
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.7 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.
PDB entry 8p7a: Crystal structure of the ORD domain of human ORP8
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2023-05-30
Authors: Eisenreichova, A., Klima, M., Boura, E.
PDB entry 8p7b: CryoEM structure of METTL6 tRNA SerRS complex in a 1:2:2 stoichiometry
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2023-05-30
Authors: Throll, P., Dolce, L.G., Kowalinski, E.
PDB entry 8p7c: CryoEM structure of METTL6 tRNA SerRS complex in a 2:2:2 stoichiometry
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-05-30
Authors: Throll, P., Dolce, L.G., Kowalinski, E.
PDB entry 8p7d: CryoEM structure of METTL6 tRNA SerRS complex in a 1:1:2 stoichiometry
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-05-30
Authors: Throll, P., Dolce, L.G., Kowalinski, E.
PDB entry 8p7e: Crystal structure of the lipase SpL from Sphingomonas sp. HXN-200 in complex with benzylamine
Classification: HYDROLASE
Source organism: Sphingomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-05-30
Authors: Mokos, D., Gruber, K., Daniel, B.
PDB entry 8p7f: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-30
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7g: Structural characterization of PHOX2B and its DNA interactions shed lights into the molecular basis of the + 7Ala variant pathogenicity in CCHS
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-05-30
Authors: Russo, L., Diana, D., Fattorusso, R.
PDB entry 8p7h: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.774 Å
Deposited: 2023-05-30
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7i: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-05-30
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7j: Crystal structure of MAP2K6 with a covalent compound GCL96
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-30
Authors: Wang, G.Q., Seidler, N., Roehm, S., Gehringer, M., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8p7k: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.929 Å
Deposited: 2023-05-30
Authors: Dym, O., Aggawal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7l: Cryo-EM structure of CDK7 subunit of CAK in complex with inhibitor LDC4297
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2023-05-30
Authors: Cushing, V.I., Koh, A.F., Feng, J., Jurgaityte, K., Bahl, A.K., Ali, S., Kotecha, A., Greber, B.J.