LiteFold/PDB huggingface dataset:
PDB entry 9unt: Crystal structure of UPF0235 protein PF1765 from Pyrococcus furiosus
Classification: UNKNOWN FUNCTION
Source organism: Pyrococcus furiosus DSM 3638
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-04-24
Authors: Yadav, B., Gaikwad, S.S., Kumar, A., Chandravanshi, K., Makde, R.D.
PDB entry 9unu: PSI-1 FCPI supercomplex from haptophyte Chrysotila roscoffensis
Classification: PHOTOSYNTHESIS
Source organism: Chrysotila roscoffensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.18 Å
Deposited: 2025-04-24
Authors: La Rocca, R., Tsai, P.-C., Kato, K., Nakajima, Y., Akita, F., Shen, J.-R.
PDB entry 9unv: Cryo-EM structure of human organic solute transporter Ost-alpha/beta bound with TLCA
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2025-04-24
Authors: Yang, X., Xu, E.
PDB entry 9unw: mouse PDCD5-TRiC complex
Classification: CHAPERONE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2025-04-24
Authors: Song, Q.Q., Cong, Y.
PDB entry 9unx: Cryo-EM structure of human OAT1 in complex with olmesartan and bromide ion.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2025-04-24
Authors: Jeon, H.M., Eun, J., Kim, K.H., Kim, Y.
PDB entry 9unz: Crystal structure of the V165A/S219E/A225P mutant of alanine dehyrogenase from Geobacillus stearothermophilus in complex with nicotinamide cytosine dinucleotide
Classification: OXIDOREDUCTASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2025-04-24
Authors: Hu, Y., Guo, X., Wang, X., Zhao, Z.
PDB entry 9uo0: Crystal structure of nanobody Tnb165 with MERS-CoV RBD
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-24
Authors: Wang, X., Lin, Z.
PDB entry 9uo1: Cryo-EM structure of human organic solute transporter Ost-alpha/beta bound with DHEAS
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-04-24
Authors: Yang, X., Xu, E.
PDB entry 9uo2: Cryo-EM structure of human organic solute transporter Ost-alpha/beta in apo state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-04-24
Authors: Yang, X., Xu, E.
PDB entry 9uo3: Cryo-EM structure of the human IgM-Fc hexamer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2025-04-25
Authors: Ji, C., Zhang, R., Xiao, J.
PDB entry 9uo4: Cryo-EM structure of the chimeric human IgM-Fc hexamer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2025-04-25
Authors: Ji, C., Zhang, R., Xiao, J.
PDB entry 9uo5: Cryo-EM structure of the human IgG-Fc hexamer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2025-04-25
Authors: Ji, C., Zhang, R., Xiao, J.
PDB entry 9uo6: Cryo-EM structure of the Xenopus IgX-Fc hexamer
Classification: IMMUNE SYSTEM
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2025-04-25
Authors: Ji, C., Zhang, R., Xiao, J.
PDB entry 9uo7: L. donovani Cell cycle associated protein MOB1
Classification: CELL CYCLE
Source organism: Leishmania donovani
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-04-25
Authors: Saw, S., Parihar, P.S., Pratap, J.V.
PDB entry 9uo8: Crystal structure of Keap1 in complex with a small molecule inhibitor
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-25
Authors: Ishida, H., Osawa, M.
PDB entry 9uo9: Structure of mouse Junctophilin-2
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-04-25
Authors: Wang, J., Li, Z., Li, J.
PDB entry 9uoa: Crystal structure of HIV-1 Reverse Transcriptase RNase H domain complexed with a galloyl inhibitor
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2025-04-25
Authors: Wei, S., Fujimoto, K., Tang, K., Zhan, P., Menendez-Arias, L., Hoshino, T.
PDB entry 9uob: Plant-TaNNS
Classification: PLANT PROTEIN
Source organism: Triticum aestivum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2025-04-25
Authors: Wang, L., Zhao, J., Yin, C., Chi, C., Hou, S.
PDB entry 9uoc: Crystal structure of nanobody Tnb150 with MERS-CoV RBD
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.24 Å
Deposited: 2025-04-25
Authors: Wang, X., Lin, Z.
PDB entry 9uod: Crystal structure of pHBMT1 from Populus trichocarpa
Classification: TRANSFERASE
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2025-04-25
Authors: Li, Q., Liu, Y.C., Li, T., Han, X.D.
PDB entry 9uoe: Glycogen phosphorylase tetramer from E. coli
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2025-04-25
Authors: Takai, M., Fukuda, Y., Inoue, T.
PDB entry 9uof: PSI-6 FCPI supercomplex from haptophyte Chrysotila roscoffensis
Classification: PHOTOSYNTHESIS
Source organism: Chrysotila roscoffensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.89 Å
Deposited: 2025-04-25
Authors: La Rocca, R., Tsai, P.-C., Kato, K., Nakajima, Y., Akita, F., Shen, J.-R.
PDB entry 9uoh: KRasG12C in complex with ASP2453
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-04-25
Authors: Amano, Y., Tateishi, Y.
PDB entry 9uoi: Crystal structure of nanobody Tnb316 with nanobody B9 and MERS-CoV RBD
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2025-04-25
Authors: Wang, X., Lin, Z.
PDB entry 9uoj: WDR5 bound with P3
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2025-04-25
Authors: Huang, Y., Song, J., Min, J.
PDB entry 9uok: Structure of the complex of LGR4_ECD with Norrin
Classification: MEMBRANE PROTEIN
Source organism: Camelus ferus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2025-04-25
Authors: Geng, Y., Hu, F.Z., Qiao, H.R.
PDB entry 9uol: Cryo-EM structure of pyrene-modified TIP60 double mutant (G12C/S50C) with addition of Nile Red
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-04-26
Authors: Yamashita, M., Kawakami, N., Arai, R., Ikeda, A., Moriya, T., Senda, T., Miyamoto, K.
PDB entry 9uom: Tacheng tick virus 1 nucleoprotein head domain
Classification: VIRAL PROTEIN
Source organism: Tacheng Tick Virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2025-04-26
Authors: Li, Z.
PDB entry 9uon: Tacheng tick virus 1 nucleoprotein head domain with selenomethionine
Classification: VIRAL PROTEIN
Source organism: Tacheng Tick Virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2025-04-26
Authors: Li, Z., Litao, S.
PDB entry 9uoo: Klebsiella pneumoniae RecA
Classification: RECOMBINATION
Source organism: Klebsiella pneumoniae 342
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-26
Authors: Zhou, C., Su, L.
PDB entry 9uop: Crystal structure of CCoV-HuPn-2018 3CL protease (3CLpro) in complex with compound 8
Classification: VIRAL PROTEIN
Source organism: Canine coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2025-04-26
Authors: Nie, T.Q., Su, H.X., Li, M.J., Xu, Y.C.
PDB entry 9uoq: Crystal structure of SARS-CoV-2 3CL protease (3CLpro) in complex with compound 8
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2025-04-26
Authors: Nie, T.Q., Su, H.X., Li, M.J., Xu, Y.C.
PDB entry 9uor: Crystal structure of IBV 3CL protease (3CLpro) in complex with compound 8
Classification: VIRAL PROTEIN
Source organism: Avian infectious bronchitis virus (strain Beaudette)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-04-26
Authors: Nie, T.Q., Su, H.X., Li, M.J., Xu, Y.C.
PDB entry 9uos: Crystal structure of PDCoV 3CL protease (3CLpro) in complex with compound 8
Classification: VIRAL PROTEIN
Source organism: Porcine deltacoronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2025-04-26
Authors: Nie, T.Q., Su, H.X., Li, M.J., Xu, Y.C.
PDB entry 9uou: Crystal structure of the fusion protein of T-lineage protein Themis and adaptor protein Grb2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.064 Å
Deposited: 2025-04-26
Authors: Ouyang, S., Zhao, Y.
PDB entry 9uov: PSI-8 FCPI supercomplex from haptophyte Chrysotila roscoffensis
Classification: PHOTOSYNTHESIS
Source organism: Chrysotila roscoffensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2025-04-26
Authors: La Rocca, R., Tsai, P.-C., Kato, K., Nakajima, Y., Akita, F., Shen, J.-R.
PDB entry 9uow: Crystal structure of Gossypium hirsutum (Cotton) 5-enol-pyruvyl-shikimate-3-phosphate synthase (EPSPS) in open conformation
Classification: TRANSFERASE
Source organism: Gossypium hirsutum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-04-27
Authors: Jangid, K., Kumar, R., Sharma, A.K., Kumar, P.
PDB entry 9uox: Structure of C. elegans piezo channel isoform k
Classification: MEMBRANE PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-04-27
Authors: Liu, Y., Guo, Y.R.
PDB entry 9uoy: Structure of C. elegans piezo channel
Classification: MEMBRANE PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-04-27
Authors: Liu, Y., Guo, Y.R.
PDB entry 9uoz: Structure of Echinococcus multilocularis Cystatin B
Classification: HYDROLASE
Source organism: Echinococcus multilocularis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.999 Å
Deposited: 2025-04-27
Authors: Huang, S.Q., Hong, W.B.
PDB entry 9up1: Tacheng tick virus 1 nucleoprotein-Nucle acid complex
Classification: VIRAL PROTEIN/DNA
Source organism: Tacheng Tick Virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-27
Authors: Li, Z., Sun, L.
PDB entry 9up2: PvdL-E2-C3-A3-PCP3 in complex with MLP (NRPS cross-module)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2025-04-27
Authors: Cao, W., Wang, J., Wang, Z.
PDB entry 9up3: Crystal structure of Ebola virus VP30 and its peptide NPL3
Classification: VIRAL PROTEIN
Source organism: Ebola virus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2025-04-27
Authors: Wu, F., Xu, W.
PDB entry 9up4: Crystal structure of Ebola virus VP30 and its peptide RPL1
Classification: VIRAL PROTEIN
Source organism: Ebola virus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2025-04-27
Authors: Wu, F., Xu, W.
PDB entry 9up5: Crystal structure of LapB from Klebsiella pneumoniae
Classification: CHAPERONE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.44 Å
Deposited: 2025-04-27
Authors: Jung, K.H., Lee, S.Y., Park, H.H.
PDB entry 9up6: Klebsiella pneumoniae NagA
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.67 Å
Deposited: 2025-04-27
Authors: Lee, S.Y., Park, H.H.
PDB entry 9up7: anti-HPV18 E7 monoclonal antibody
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-27
Authors: Feng, H., Tingting, L., Ying, G., Shaowei, L.
PDB entry 9up8: Tacheng tick virus 1 nucleoprotein
Classification: VIRAL PROTEIN
Source organism: Tacheng Tick Virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2025-04-27
Authors: Li, Z., Sun, L.
PDB entry 9up9: Cystal Structure of Shark VNAR Nanobody
Classification: IMMUNE SYSTEM
Source organism: Chiloscyllium plagiosum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-04-28
Authors: Jangid, K., Kumar, V., Yadav, U., Kumar, R., Tomar, S., Kumar, P.
PDB entry 9upa: Improved thermostability of a GH10 xylanase based on its X-ray crystal structure
Classification: CARBOHYDRATE
Source organism: Massilia sp. RBM26
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-04-28
Authors: Dong, P.P., Lu, P.
PDB entry 9upb: Structure of the human TREX-2 bound to UAP56
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2025-04-28
Authors: Zhang, X., Gong, X., Ge, X.
PDB entry 9upc: Structure of human TREX-2
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2025-04-28
Authors: Zhang, X., Gong, X., Ge, X.
PDB entry 9upd: Crystal structure of human serum albumin complex with nateglinide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-04-28
Authors: Kawai, A., Nishi, K., Yamasaki, K.
PDB entry 9upe: Glycogen phosphorylase dimer from E. coli in complex with AMP.
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2025-04-28
Authors: Takai, M., Fukuda, Y., Inoue, T.
PDB entry 9upf: Cryo-EM structure of human olfactory CNG channel in cAMP-bound open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2025-04-28
Authors: Xue, J., Jiang, Y.
PDB entry 9upg: Cryo-EM structure of human olfactory CNGA2/A4/B1 in CaM-bound closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2025-04-28
Authors: Xue, J., Jiang, Y.
PDB entry 9upq: Structure of 3-amino-3-carboxyltransferase
Classification: TRANSFERASE
Source organism: Nocardia uniformis subsp. tsuyamanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-04-28
Authors: Gao, Y., Mori, T., Awakawa, T., Abe, I.
PDB entry 9ups: Anti-CRISPR protein
Classification: VIRAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: SOLUTION NMR
Deposited: 2025-04-29
Authors: Suh, J.Y., Hong, S.H.
PDB entry 9upt: Structure of AtBgl1A, a GH1 beta-Glucosidase from Acetivibrio thermocellus
Classification: HYDROLASE
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: X-RAY DIFFRACTION
Resolution: 2.369 Å
Deposited: 2025-04-29
Authors: Pitchayatanakorn, P., Kongsaeree, P.T., Kongsaeree, P.
PDB entry 9upu: Cryo-EM strucutre of CXCR4 complexed with agonist SDV1a
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens; Oplophorus gracilirostris; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-04-29
Authors: Jiao, H.Z., Sang, X.H., Huang, Z.W., Hu, H.L.
PDB entry 9upv: Cryo-EM structure of CXCR4 complexed with agonist SDVX1
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; Oplophorus gracilirostris; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-04-29
Authors: Jiao, H.Z., Sang, X.H., Huang, Z.W., Hu, H.L.
PDB entry 9upw: CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Gp4A, -1 dC in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2025-04-29
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9upz: KCMF1 Zn-coordinating domains with RTGG peptide
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2025-04-29
Authors: Lee, J.Y., Shin, J.S., Song, H.K.
PDB entry 9urd: Crystal structure of Zinc-binding metallopeptidase (Uniprot: A0AAN3A8D2) from Bacteroides ovatus
Classification: HYDROLASE
Source organism: Bacteroides ovatus ATCC 8483
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-29
Authors: Kulkarni, B.S., Kumar, A.K., Jamdar, S.N., Makde, R.D.
PDB entry 9urh: Structural insight into DNA recognition by RRM1+2 domain of human ETR-3 protein
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2025-04-29
Authors: Patra, A., Bhavesh, N.S.
PDB entry 9uri: apo form of polyphosphate kinase 1 (PPK1)
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2025-04-30
Authors: Jiang, W.J., Zhao, J., Wei, W.
PDB entry 9urj: binary complex of polyP-bound polyphosphate kinase 1 (PPK1)
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2025-04-30
Authors: Jiang, W.J., Zhao, J., Wei, W.
PDB entry 9us2: Crystal structure of YgdH from Neisseria meningitidis
Classification: HYDROLASE
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-05-01
Authors: Chen, W.Q., Yu, L., Chen, R.Y.
PDB entry 9us3: Klebsiella pneumoniae maltohexaose-producing alpha-amylase
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.899 Å
Deposited: 2025-05-01
Authors: Fujimoto, Z., Kishine, N., Momma, M.
PDB entry 9us4: Klebsiella pneumoniae maltohexaose-producing alpha-amylase in complex with acarbose
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-05-01
Authors: Fujimoto, Z., Kishine, N., Momma, M.
PDB entry 9us5: Domain N deletion mutant of Klebsiella pneumoniae maltohexaose-producing alpha-amylase in complex with maltohexaose
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2025-05-01
Authors: Fujimoto, Z., Kishine, N., Momma, M.
PDB entry 9us6: Klebsiella pneumoniae maltohexaose-producing alpha-amylase, terbium derivative
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.699 Å
Deposited: 2025-05-01
Authors: Fujimoto, Z., Kishine, N., Momma, M.
PDB entry 9us9: Whole structure of WT human prostamide/prostaglandin F synthase(PGFS)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.38 Å
Deposited: 2025-05-01
Authors: Yen, N.T.K., Cheon, S.W., Han, B.W.
PDB entry 9usa: Whole structure of C44S/C47S double mutant form of human prostamide/prostaglandin F synthase (PGFS)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-05-01
Authors: Cheon, S.W., Yen, N.T.K., Han, B.W.
PDB entry 9usb: GppNHp-bound KRAS G12D in complex with MCB-294
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-05-01
Authors: Li, K.K., Guo, R.-T., Huang, J.W.
PDB entry 9ust: MRGPRE-Gq-scFv16-complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Equus quagga; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2025-05-02
Authors: Zhong, Y.N.
PDB entry 9ut1: The helicase-primase complex from HHV1 bound with ssDNA and amenamevir
Classification: REPLICATION
Source organism: Human alphaherpesvirus 1; Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2025-05-02
Authors: Sato, K., Kise, Y., Hamada, K., Nureki, O., Sengoku, T.
PDB entry 9ut3: The helicase module of the helicase-primase complex from HHV1 bound with ssDNA and amenamevir
Classification: REPLICATION
Source organism: Human alphaherpesvirus 1; Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2025-05-02
Authors: Sato, K., Kise, Y., Hamada, K., Nureki, O., Sengoku, T.
PDB entry 9ut4: The primase module of the helicase-primase complex from HHV1 bound with ssDNA and amenamevir
Classification: REPLICATION
Source organism: Human alphaherpesvirus 1; Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2025-05-02
Authors: Sato, K., Kise, Y., Hamada, K., Nureki, O., Sengoku, T.
PDB entry 9ut5: The helicase-primase complex from HHV1 bound with ssDNA and pritelivir
Classification: REPLICATION
Source organism: Human alphaherpesvirus 1; Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2025-05-02
Authors: Sato, K., Kise, Y., Hamada, K., Nureki, O., Sengoku, T.
PDB entry 9ut6: The helicase module of the helicase-primase complex from HHV1 bound with ssDNA and pritelivir
Classification: REPLICATION
Source organism: Human alphaherpesvirus 1; Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2025-05-02
Authors: Sato, K., Kise, Y., Hamada, K., Nureki, O., Sengoku, T.
PDB entry 9ut7: The Primase module of the helicase-primase complex from HHV1 bound with ssDNA and pritelivir
Classification: REPLICATION
Source organism: Human alphaherpesvirus 1; Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2025-05-02
Authors: Sato, K., Kise, Y., Hamada, K., Nureki, O., Sengoku, T.
PDB entry 9ut8: The full-length human sweet taste receptor TAS1R2 and TAS1R3 in the apo state
Classification: SIGNALING PROTEIN
Source organism: Branchiostoma lanceolatum; Discosoma sp. (Sea anemone); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2025-05-03
Authors: Shi, Z.J., Xu, W.X., Yue, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 9ut9: The VFT domains of human sweet taste receptor TAS1R2 and TAS1R3 in the apo state
Classification: SIGNALING PROTEIN
Source organism: Branchiostoma lanceolatum; Discosoma sp. (Sea anemone); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2025-05-03
Authors: Shi, Z.J., Xu, W.X., Yue, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 9uta: The transmembrane domains of human sweet taste receptor TAS1R2 and TAS1R3 in the apo state
Classification: SIGNALING PROTEIN
Source organism: Branchiostoma lanceolatum; Discosoma sp. (Sea anemone); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2025-05-03
Authors: Shi, Z.J., Xu, W.X., Yue, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 9utb: The full-length human sweet taste receptor TAS1R2 and TAS1R3 in the sucralose-bound state
Classification: SIGNALING PROTEIN
Source organism: Branchiostoma lanceolatum; Discosoma sp.; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2025-05-03
Authors: Shi, Z.J., Xu, W.X., Yue, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 9utc: The VFT domains of human sweet taste receptor TAS1R2 and TAS1R3 in the sucralose-bound state
Classification: SIGNALING PROTEIN
Source organism: Branchiostoma lanceolatum; Discosoma sp.; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2025-05-03
Authors: Shi, Z.J., Xu, W.X., Yue, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 9utd: influx carrier substrate bound form
Classification: HORMONE
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2025-05-03
Authors: Chen, H., Jiang, D.
PDB entry 9ute: influx carrier apo form
Classification: HORMONE
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2025-05-03
Authors: Chen, H., Jiang, D.
PDB entry 9utg: Glycogen phosphorylase from Segatella copri decamer in complex with AMP
Classification: STRUCTURAL PROTEIN
Source organism: Segatella copri
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2025-05-03
Authors: Shobu, K., Fukuda, Y., Inoue, T.
PDB entry 9utj: Monoclinic crystal structure of acid-stable protracted insulin
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-05-04
Authors: Ayan, E., Demirci, H.
PDB entry 9utk: Monoclinic crystal structure of acid-stable protracted insulin (293 K)
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2025-05-04
Authors: Ayan, E., Demirci, H.
PDB entry 9utm: Crystal structure of an anti-CRISPR protein AcrIIA11
Classification: VIRAL PROTEIN
Source organism: Clostridium sp. OF09-36
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2025-05-04
Authors: Wang, H., Feng, Y.
PDB entry 9utu: Structure of Fks1 in complex with YMR295C
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2025-05-05
Authors: Li, J.L., Zhu, A.Q., Wang, X., Yan, C.Y., Deng, D.
PDB entry 9utw: Structure of dimeric FKS1 in complex with tRNA
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2025-05-05
Authors: Li, J.L., Zhu, A.Q., Liu, J.X., Dai, X.L., Wang, X., Yan, C.Y., Deng, D.
PDB entry 9uu0: The structure of Bacteroides fragilis T6SS effector BteO
Classification: TOXIN
Source organism: Bacteroides fragilis; Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2025-05-05
Authors: He, J., Gao, X.
PDB entry 9uu1: Bacteroides fragilis T6SS immunity protein BtiO
Classification: ANTITOXIN
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-05-05
Authors: He, J., Gao, X.
PDB entry 9uu2: Outer membrane protein OmpA-c-like domain
Classification: STRUCTURAL PROTEIN
Source organism: Bacteroides fragilis NCTC 9343
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-05-05
Authors: He, J., Gao, X.
PDB entry 9uu3: Cryo-EM structure of the maize CER6-GL2 complex bound with CoA
Classification: PLANT PROTEIN
Source organism: Zea mays
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2025-05-05
Authors: Liu, Y., Zhang, P.
PDB entry 9uu4: Cryo-EM structure of the maize CER6-GL2 complex (inactive C222A mutant) bound with malonyl-CoA
Classification: PLANT PROTEIN
Source organism: Zea mays
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2025-05-05
Authors: Liu, Y., Zhang, P.
PDB entry 9uu5: Cryo-EM structure of the maize CER6-GL2 complex in the presence of 30:0 CoA
Classification: PLANT PROTEIN
Source organism: Zea mays
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2025-05-05
Authors: Liu, Y., Zhang, P.
PDB entry 9uu7: The crystal structure of human DEAD-box RNA helicase DDX28 RecA1 domain in complex with ADP
Classification: RIBOSOMAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-05-06
Authors: Lv, M.Q., Cui, J.
PDB entry 9uuh: binary complex of ATP-bound polyphosphate kinase 1 (PPK1)
Classification: TRANSFERASE
Source organism: Citrobacter freundii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2025-05-07
Authors: Jiang, W.J., Zhao, J., Wei, W.
PDB entry 9uuj: Crystal structure of the mu2 subunit of the clathrin-adaptor protein 2 (AP2) bound to HPV16 E7(residues 22-39)
Classification: ENDOCYTOSIS
Source organism: Human papillomavirus 16; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.703 Å
Deposited: 2025-05-07
Authors: Ku, B., Jung, S.
PDB entry 9uuk: Crystal structure of the mu2 subunit of the clathrin-adaptor protein 2 (AP2) bound to HPV16 E7(residues 22-32; S31E and S32E)
Classification: ENDOCYTOSIS
Source organism: Human papillomavirus 16; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.199 Å
Deposited: 2025-05-07
Authors: Ku, B., Jung, S.
PDB entry 9uul: Crystal structure of the mu2 subunit of the clathrin-adaptor protein 2 (AP2) bound to HPV16 E7(residues 22-39; S31E and S32E)
Classification: ENDOCYTOSIS
Source organism: Human papillomavirus 16; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.298 Å
Deposited: 2025-05-07
Authors: Ku, B., Jung, S.
PDB entry 9uuo: The NuA3 histone acetyltransferase complex
Classification: METAL BINDING PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2025-05-07
Authors: Shi, W.P., Wang, Y.R., Zhang, H.Q.
PDB entry 9uup: Glycogen phosphorylase from Segatella copri bound to glycogen-pentamer
Classification: STRUCTURAL PROTEIN
Source organism: Segatella copri
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.03 Å
Deposited: 2025-05-07
Authors: Shobu, K., Fukuda, Y., Inoue, T.
PDB entry 9uur: The complex of human pMEK1 and uERK1 (ANP)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2025-05-08
Authors: Peng, C., Sun, Y., Liu, S., Zhou, F., Hu, Q.
PDB entry 9uus: The NuA3 histone acetyltransferase complex bound to acetyl-CoA and H3 tail
Classification: METAL BINDING PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-05-08
Authors: Wang, Y.R., Zhang, H.Q.
PDB entry 9uuu: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2025-05-08
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9uuv: beta barrel protein-LucK
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces fagopyri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2025-05-08
Authors: Zhang, B., Ge, H.M., Ma, X.X.
PDB entry 9uux: The complex of human pMEK1 and ERK1 pT202 (ANP)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2025-05-08
Authors: Peng, C., Sun, Y., Liu, S., Zhou, F., Hu, Q.
PDB entry 9uv4: Structure of MHV68 glycoprotein B in complex with Fab5
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Murid herpesvirus 68; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-05-09
Authors: Cheng, B.Z., Fang, X.Y., Xie, C., Sun, C., Liu, Z., Zeng, M.S.
PDB entry 9uv5: ligament intra-crystalline peptide (LICP)
Classification: BIOSYNTHETIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2025-05-09
Authors: Futagawa, K., Suzuki, M.
PDB entry 9uv6: Encounter complex structure of E2N and Ubiquitin
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2025-05-09
Authors: Gong, Z., Liu, M.L., Zhang, X., He, L.C., Zhao, Q., Zhang, L.H., Zhang, B.R.
PDB entry 9uv8: Crystal structure of HLA-A*11:01 in complex with KRAS G12D 9-mer peptide (VVGADGVGK)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2025-05-09
Authors: Jiali, Z., Linlin, Z.
PDB entry 9uvc: Structure of MHV68 glycoprotein B
Classification: VIRAL PROTEIN
Source organism: Murid gammaherpesvirus 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-05-09
Authors: Cheng, B.Z., Fang, X.Y., Xie, C., Sun, C., Liu, Z., Zeng, M.S.
PDB entry 9uvh: Cystal Structure of Shark VNAR Nanobody
Classification: IMMUNE SYSTEM
Source organism: Chiloscyllium plagiosum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-05-10
Authors: Jangid, K., Kumar, V., Yadav, U., Gupta, R., Kumar, R., Tomar, S., Kumar, P.
PDB entry 9uvi: Crystal structure of beta 2 microglobulin in complex with antibody BBM.1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-05-10
Authors: Wei, P.C., Wu, J.J.
PDB entry 9uvl: Crystal structure of AGAP1-GDP complex
Classification: CELL INVASION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2025-05-10
Authors: Zhang, S., Zhang, Y., Cheng, N., Wang, J., Li, Z., Meng, G., Zhang, H.
PDB entry 9uvm: The SeMet pili protein of Streptococcus Sanguinis
Classification: CELL ADHESION
Source organism: Streptococcus sanguinis SK36
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-05-10
Authors: Takebe, K., Suzuki, M., Nakata, M.
PDB entry 9uvr: Crystal structure of SSA1632 from Streptococcus sanguinis
Classification: CELL ADHESION
Source organism: Streptococcus sanguinis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2025-05-11
Authors: Takebe, K., Suzuki, M., Nakata, M.
PDB entry 9uvs: Crystal Structure of transaminase from Phaeobacter porticola
Classification: TRANSFERASE
Source organism: Phaeobacter porticola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2025-05-11
Authors: Heo, Y.-S.
PDB entry 9uw0: Crystal structure of 2'-dG-III riboswitch with Guanosine, manganese saok
Classification: RNA
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2025-05-11
Authors: Shen, X., Ren, A.M.
PDB entry 9uw1: Crystal structure of CDC48A-N domain in complex with PUX5 SHP box motif
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2025-05-11
Authors: Arold, S.T., Zhang, J.
PDB entry 9uw3: The complex of human pMEK1 and ERK1 pY204 (ANP)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2025-05-12
Authors: Peng, C., Sun, Y., Liu, S., Zhou, F., Hu, Q.
PDB entry 9uw4: The complex of human pMEK1 and uERK1 (ANP)(from pY204ERK1)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-05-12
Authors: Peng, C., Sun, Y., Liu, S., Zhou, F., Hu, Q.
PDB entry 9uwd: Cryo-EM structure of inactive-DP1
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2025-05-12
Authors: Xu, J., Xu, Y., Wu, C., Xu, H.E.
PDB entry 9uwg: Structure of the human DCAF2-DDB1 complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2025-05-12
Authors: Shen, M., Zhang, H.
PDB entry 9uwh: human mitoribosome trapped by retapamulin
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-05-12
Authors: Ando, Y., Nureki, O., Itoh, Y.
PDB entry 9uwi: Cryo-EM structure of human V1aR bound with atosiban at a resolution of 2.8 angstrom
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-05-12
Authors: Wu, X.W., Zhong, P.Y., Chu, B.X.
PDB entry 9uwj: Cryo-EM structure of human V1aR bound with balovaptan at a resolution of 3.0 angstrom
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-05-12
Authors: Wu, X.W., Zhong, P.Y., Chu, B.X.
PDB entry 9uwk: Crystal structure of human galectin-10 produced by cell-free protein synthesis
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-05-12
Authors: Kojima, M., Ueno, T., Abe, S., Hirata, K.
PDB entry 9uwl: Cryo-EM structure of human V1aR bound with SRX246 at a resolution of 2.6 angstrom
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-05-12
Authors: Wu, X.W., Zhong, P.Y., Chu, B.X.
PDB entry 9uwn: Crystal structure of E33A mutant of human galectin-10 produced by cell-free protein synthesis in complex with raffinose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2025-05-12
Authors: Kojima, M., Ueno, T., Abe, S., Hirata, K.
PDB entry 9uwo: Crystal structure of human galectin-10 produced by cell-free protein synthesis in complex with sucrose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2025-05-12
Authors: Kojima, M., Ueno, T., Abe, S., Hirata, K.
PDB entry 9uwp: Crystal structure of human galectin-10 produced by cell-free protein synthesis in complex with lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2025-05-12
Authors: Kojima, M., Ueno, T., Abe, S., Hirata, K.
PDB entry 9uws: Crystal structure of human galectin-10 produced by cell-free protein synthesis in complex with trehalose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2025-05-12
Authors: Kojima, M., Ueno, T., Abe, S., Hirata, K.
PDB entry 9uwt: Crystal structure of human galectin-10 produced by cell-free protein synthesis in complex with maltose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2025-05-12
Authors: Kojima, M., Ueno, T., Abe, S., Hirata, K.
PDB entry 9uwu: Crystal structure of human galectin-10 produced by cell-free protein synthesis in complex with melezitose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2025-05-12
Authors: Kojima, M., Ueno, T., Abe, S., Hirata, K.
PDB entry 9uww: Cryo-EM structure of the human P2X2 receptor in the apo closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2025-05-13
Authors: Zhang, J., Cheng, X.Y.
PDB entry 9uwx: Cryo-EM structure of the human P2X2 receptor in the ATP-bound open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2025-05-13
Authors: Zhang, J., Cheng, X.Y.
PDB entry 9uwy: Cryo-EM structure of the human P2X2 receptor in the ATP-bound desensitised state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2025-05-13
Authors: Zhang, J., Cheng, X.Y.
PDB entry 9uwz: Crystal structure of the type III secretion chaperone VecA from Vibrio parahaemolyticus
Classification: CHAPERONE
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-05-13
Authors: Iimori, M., Oki, H., Akeda, Y., Ishii, E., Kodama, T., Ueda, T., Nakamura, S., Matsuda, S., Kawahara, K., Iida, T.
PDB entry 9ux0: Crystal structure of the virulence effector VepA in complex with its secretion chaperone VecA
Classification: TOXIN
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2025-05-13
Authors: Iimori, M., Oki, H., Akeda, Y., Ishii, E., Kodama, T., Ueda, T., Nakamura, S., Matsuda, S., Kawahara, K., Iida, T.
PDB entry 9ux1: Cryo-EM structure of the human P2X2/3 heteromer receptor - class 1 (1:2)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2025-05-13
Authors: Zhang, J., Cheng, X.Y.
PDB entry 9ux2: Cryo-EM structure of the human P2X2/3 heteromer receptor - class 2 (2:1)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2025-05-13
Authors: Zhang, J., Cheng, X.Y.
PDB entry 9ux3: Cryo-EM structure of the human P2X2/3 heteromer receptor bound to AF-219
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2025-05-13
Authors: Zhang, J., Cheng, X.Y.
PDB entry 9ux4: Cryo-EM structure of the human P2X3 receptor in the camlipixant-bound inhibited state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.57 Å
Deposited: 2025-05-13
Authors: Zhang, J., Cheng, X.Y.
PDB entry 9ux7: CryoEM Structure of LmuAB-DNA complex
Classification: IMMUNE SYSTEM
Source organism: Bacillus sp. nio-1130; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2025-05-13
Authors: Li, M., Zhao, X., An, L., Li, S., Zhang, K., Feng, Y.
PDB entry 9ux8: CryoEM Structure of LmuAB Apo State
Classification: IMMUNE SYSTEM
Source organism: Bacillus sp. nio-1130
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2025-05-13
Authors: Li, M., Zhao, X., An, L., Li, S., Zhang, K., Feng, Y.
PDB entry 9ux9: local ATPase-NCP structure of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
Classification: GENE REGULATION/DNA
Source organism: artificial sequences; Homo sapiens; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2025-05-13
Authors: Sun, F., Zou, B., Li, H., Xu, C., Luo, Q., Wang, C., Xu, P., Pei, D., Chen, J., Qin, D., Zhang, Y., He, J.
PDB entry 9uxd: SARS-CoV2 Spike protein with Fab fragment antibody KXD355,state1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2025-05-13
Authors: Wang, H.
PDB entry 9uxe: SARS-CoV2 Spike protein with Fab fragment antibody KXD355,state2
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2025-05-13
Authors: Wang, H.
PDB entry 9uxg: Structure of WDR5 in complex with Peptide 2
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-05-14
Authors: Xu, L., Yang, Y., Chen, X.M.
PDB entry 9uxh: type II Lamassu, LmuACB with DNA
Classification: DNA BINDING PROTEIN
Source organism: Vibrio cholerae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2025-05-14
Authors: Zhao, X., Li, M., Li, S., Feng, Y., Zhang, K.
PDB entry 9uxi: type II Lamassu, LmuA tetramer
Classification: DNA BINDING PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2025-05-14
Authors: Zhao, X., Li, S., Feng, Y., Zhang, K.
PDB entry 9uxj: Structure of WDR5 in complex with Peptide 2_R4A
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2025-05-14
Authors: Xu, L., Yang, Y., Chen, X.M.
PDB entry 9uxk: type II Lamassu, LmuACB from Vibrio cholerae O1 El
Classification: DNA BINDING PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2025-05-14
Authors: Zhao, X., Li, M., Li, S., Feng, Y., Zhang, K.
PDB entry 9uxl: type II Lamassu, LmuACB from Vibrio cholerae O1 El
Classification: DNA BINDING PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2025-05-14
Authors: Zhao, X., Li, M., Li, S., Feng, Y., Zhang, K.
PDB entry 9uxm: Structure of WDR5 in complex with Peptide 1
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2025-05-14
Authors: Xu, L., Yang, Y., Chen, X.M.
PDB entry 9uxt: The Structural Basis of ClpP1 in Pseudomonas plecoglossicida
Classification: HYDROLASE
Source organism: Pseudomonas plecoglossicida NBRC 103162 = DSM 15088
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2025-05-15
Authors: Jingjie, C.
PDB entry 9uy3: Anamorelin bound growth hormone secretagogue receptor in complex with Gq
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2025-05-14
Authors: Wang, R., Sun, J., Liu, H., Guo, S., Zhang, Y., Hu, W., Wang, J., Liu, H., Zhuang, Y., Jiang, Y., Xie, X., Xu, H.E., Wang, Y.
PDB entry 9uy9: Macacine gammaherpesvirus 4 glycoprotein B in complex with Fab5
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macacine gammaherpesvirus 4; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-05-15
Authors: Cheng, B.Z., Fang, X.Y., Xie, C., Sun, C., Liu, Z., Zeng, M.S.
PDB entry 9uyc: TxtE mutant-H176FA248F With trp
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces scabiei 87.22
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2025-05-15
Authors: Yang, X., Zhang, L.J.
PDB entry 9uyh: Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 1)
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia phage EcSzw-2; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-05-15
Authors: Cai, H., Lin, X., Zhao, L., He, M., Yu, J., Zhang, B., Ma, Y., Xie, C., Shui, W., Zhao, Q., Zhu, Y., Wu, B.
PDB entry 9uyi: Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 2)
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia phage EcSzw-2; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-05-15
Authors: Cai, H., Lin, X., Zhao, L., He, M., Yu, J., Zhang, B., Ma, Y., Xie, C., Shui, W., Zhao, Q., Zhu, Y., Wu, B.
PDB entry 9uyj: Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 3)
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia phage EcSzw-2; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-05-15
Authors: Cai, H., Lin, X., Zhao, L., He, M., Yu, J., Zhang, B., Ma, Y., Xie, C., Shui, W., Zhao, Q., Zhu, Y., Wu, B.
PDB entry 9uyl: Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 4)
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia phage EcSzw-2; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-05-15
Authors: Cai, H., Lin, X., Zhao, L., He, M., Yu, J., Zhang, B., Ma, Y., Xie, C., Shui, W., Zhao, Q., Zhu, Y., Wu, B.