LiteFold/PDB huggingface dataset:
PDB entry 7so5: Novel structural insights for a pair of monoclonal antibodies recognizing non-overlapping epitopes of the glucosyltransferase domain of Clostridium difficile toxin B
Classification: TOXIN/IMMUNE SYSTEM
Source organism: Clostridioides difficile R20291; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.797 Å
Deposited: 2021-10-29
Authors: Liu, J.
PDB entry 7so6: Crystal Structure of HIV-1 K103N, Y181C mutant Reverse Transcriptase in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-7-fluoro-2-naphthonitrile (JLJ635), a Non-nucleoside Inhibitor
Classification: TRANSFERASE, Viral Protein
Source organism: Human immunodeficiency virus type 1 group M subtype B; Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2021-10-29
Authors: Bertoletti, N., Frey, K.M., Anderson, K.S., Cisneros Trigo, J.A., Jorgensen, W.L., Chan, A.H.
PDB entry 7so7: Novel structural insights for a pair of monoclonal antibodies recognizing non-overlapping epitopes of the glucosyltransferase domain of Clostridium difficile toxin B
Classification: TOXIN/IMMUNE SYSTEM
Source organism: Clostridioides difficile; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.59 Å
Deposited: 2021-10-29
Authors: Liu, J.
PDB entry 7so9: SARS-CoV-2 S B.1.617.2 delta variant + S2M11 + S2L20 Global Refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2021-10-29
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7soa: SARS-CoV-2 S NTD B.1.617.2 delta variant + S2L20 Local Refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-10-29
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7sob: SARS-CoV-2 S B.1.617.1 kappa variant + S309 + S2L20 Global Refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2021-10-29
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7soc: SARS-CoV-2 S RBD B.1.617.1 kappa variant S309 Local Refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-10-29
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7sod: SARS-CoV-2 S NTD B.1.617.1 kappa variant S2L20 Local Refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-10-29
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7soe: SARS-CoV-2 S B.1.617.1 kappa variant + S2X303 Global Refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-10-29
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7sof: SARS-CoV-2 S NTD B.1.617.1 kappa variant S2X303 Local Refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-10-29
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7sog: Thermostable actophorin
Classification: MOTOR PROTEIN
Source organism: Acanthamoeba castellanii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-10-30
Authors: Lieberman, R.L., Quirk, S.
PDB entry 7soh: Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Classification: TOXIN
Source organism: Leiurus quinquestriatus quinquestriatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2021-10-30
Authors: Gewe, M.M., Strong, R.K.
PDB entry 7soi: Structure of I552A Soybean Lipoxygenase at 277K
Classification: OXIDOREDUCTASE
Source organism: Glycine max
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-10-31
Authors: Gee, C.L., Offenbacher, A.R., Hu, S.
PDB entry 7soj: Structure of V750A Soybean Lipoxygenase at 277K
Classification: OXIDOREDUCTASE
Source organism: Glycine max
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-10-31
Authors: Gee, C.L., Offenbacher, A.R., Hu, S.
PDB entry 7sok: Structure of Nicotinamide N-Methyltransferase (NNMT) in complex with inhibitor II329
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2021-10-31
Authors: Yadav, R., Iyamu, I.D., Huang, R., Noinaj, N.
PDB entry 7sol: Crystal Structures of the bispecific ubiquitin/FAT10 activating enzyme, Uba6
Classification: SIGNALING PROTEIN/Ligase
Source organism: Homo sapiens; Triticum aestivum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25001 Å
Deposited: 2021-10-31
Authors: Olsen, S.K., Gao, F., Lv, Z.
PDB entry 7som: Ciliary C2 central pair apparatus isolated from Chlamydomonas reinhardtii
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-11-01
Authors: Gui, M., Wang, X., Dutcher, S.K., Brown, A., Zhang, R.
PDB entry 7soo: LaM domain of human LARP1
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-11-01
Authors: Kozlov, G., Gehring, K.
PDB entry 7sop: LaM domain of human LARP1 in complex with AAAUAA RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-11-01
Authors: Kozlov, G., Gehring, K.
PDB entry 7soq: LaM domain of human LARP1 in complex with AAA RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2021-11-01
Authors: Kozlov, G., Gehring, K.
PDB entry 7sor: LaM domain of human LARP1 in complex with AAA RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2021-11-01
Authors: Kozlov, G., Gehring, K.
PDB entry 7sos: LaM domain of human LARP1 in complex with AAAA RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-11-01
Authors: Kozlov, G., Gehring, K.
PDB entry 7sot: LaM domain of human LARP1 in complex with AAAAAA oligonucleotide
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2021-11-01
Authors: Kozlov, G., Gehring, K.
PDB entry 7sou: LaM domain of human LARP1 in complex with AAAAAA polynucleotide
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-11-01
Authors: Kozlov, G., Gehring, K.
PDB entry 7sov: LaM domain of human LARP1 in complex with AAAAAAAAAAA RNA polynucleotide
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-11-01
Authors: Kozlov, G., Gehring, K.
PDB entry 7sow: LaM domain of human LARP1 in complex with UUUUUU
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-11-01
Authors: Kozlov, G., Gehring, K.
PDB entry 7sox: Cryo-electron tomography structure of membrane-bound EHD4 complex
Classification: LIPID BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.6 Å
Deposited: 2021-11-01
Authors: Melo, A.A., Noel, J.K., Daumke, O.
PDB entry 7soy: The structure of the PP2A-B56gamma1 holoenzyme-PME-1 complex
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-11-01
Authors: Li, Y., Balakrishnan, V.K., Rowse, M., Novikova, I.V., Xing, Y.
PDB entry 7soz: Replication Initiator Protein REPE54 and cognate DNA sequence with terminal three prime phosphates chemically crosslinked (5 mg/mL EDC, 12 hours).
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2021-11-01
Authors: Ward, A.R., Snow, C.D.
PDB entry 7sp0: Crystal structure of human SFPQ L534I mutant in complex with zinc
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2021-11-01
Authors: Lee, M.
PDB entry 7sp1: RNA-induced tau amyloid fibril
Classification: PROTEIN FIBRIL/RNA
Source organism: Homo sapiens; Mus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-11-02
Authors: Abskharon, R., Sawaya, M.R., Boyer, D.R., Eisenberg, D.S.
PDB entry 7sp2: Structure of PLS A-domain (residues 391-656; 513-518 deletion mutant) from Staphylococcus aureus
Classification: CELL ADHESION
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2021-11-02
Authors: Clark, L., Whelan, F., Atkin, K.E., Brentnall, A.S., Dodson, E.J., Turkenburg, J.P., Potts, J.R.
PDB entry 7sp3: E. coli RppH bound to Ap4A
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-11-02
Authors: Serganov, A.A., Vasilyev, N., Nuthanakanti, A.
PDB entry 7sp4: In situ cryo-EM structure of bacteriophage Sf6 gp3:gp7:gp5 complex in conformation 2 at 3.71A resolution
Classification: STRUCTURAL PROTEIN
Source organism: Shigella phage Sf6
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2021-11-02
Authors: Li, F., Cingolani, G., Hou, C., Yang, R.
PDB entry 7sp5: Crystal Structure of a Eukaryotic Phosphate Transporter
Classification: TRANSPORT PROTEIN
Source organism: Serendipita indica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-11-02
Authors: Stroud, R.M., Pedersen, B.P., Kumar, H., Waight, A.B., Risenmay, A.J., Roe-Zurz, Z., Chau, B.H., Schlessinger, A., Bonomi, M., Harries, W., Sali, A., Johri, A.K., Finer-Moore, J.
PDB entry 7sp6: Chlorella virus hyaluronan synthase
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Paramecium bursaria Chlorella virus CZ-2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-02
Authors: Maloney, F.P., Kuklewicz, J., Zimmer, J.
PDB entry 7sp7: Chlorella virus hyaluronan synthase inhibited by UDP
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Paramecium bursaria Chlorella virus CZ-2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-02
Authors: Maloney, F.P., Kuklewicz, J., Zimmer, J.
PDB entry 7sp8: Chlorella virus Hyaluronan Synthase bound to UDP-GlcNAc
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Paramecium bursaria Chlorella virus CZ-2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-11-02
Authors: Maloney, F.P., Kuklewicz, J., Zimmer, J.
PDB entry 7sp9: Chlorella virus Hyaluronan Synthase in the GlcNAc-primed channel-closed state
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Paramecium bursaria Chlorella virus CZ-2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-02
Authors: Maloney, F.P., Kuklewicz, J., Zimmer, J.
PDB entry 7spa: Chlorella virus Hyaluronan Synthase in the GlcNAc-primed, channel-open state
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Paramecium bursaria Chlorella virus CZ-2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-11-02
Authors: Maloney, F.P., Kuklewicz, J., Zimmer, J.
PDB entry 7spb: Models for C13 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by F-plasmid (pED208).
Classification: STRUCTURAL PROTEIN
Source organism: Salmonella typhi
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2021-11-02
Authors: Liu, X., Khara, P., Baker, M.L., Christie, P.J., Hu, B.
PDB entry 7spc: Models for C17 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by F-plasmid (pED208).
Classification: STRUCTURAL PROTEIN
Source organism: Salmonella typhi
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2021-11-02
Authors: Liu, X., Khara, P., Baker, M.L., Christie, P.J., Hu, B.
PDB entry 7spd: Crystal Structure of The Tetramerization Domain (29-147) From Human Voltage-gated Potassium Channel Kv2.1 in C 2 2 21 Space Group
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-11-02
Authors: Xu, Z., Schnicker, N., Baker, S.
PDB entry 7spe: Crystal structure of sperm whale myoglobin variant sMb5(O2beY)
Classification: OXYGEN STORAGE
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-02
Authors: Bacik, J.P., Fasan, R., Ando, N.
PDB entry 7spf: Crystal structure of sperm whale myoglobin variant sMb5(pCaaF)
Classification: OXYGEN STORAGE
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2021-11-02
Authors: Bacik, J.P., Fasan, R., Ando, N.
PDB entry 7spg: Crystal structure of sperm whale myoglobin variant sMb13(pCaaF) in space group P212121
Classification: OXYGEN STORAGE
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-11-02
Authors: Bacik, J.P., Fasan, R., Ando, N.
PDB entry 7sph: Crystal structure of sperm whale myoglobin variant sMb13(pCaaF) in space group P21
Classification: OXYGEN STORAGE
Source organism: Physeter macrocephalus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-11-02
Authors: Bacik, J.P., Fasan, R., Ando, N.
PDB entry 7spi: Models for C13 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by a plasmid overproducing TraV, TraK and TraB of pED208
Classification: STRUCTURAL PROTEIN
Source organism: Salmonella typhi
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2021-11-02
Authors: Liu, X., Khara, P., Baker, M.L., Christie, P.J., Hu, B.
PDB entry 7spj: Models for C17 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by a plasmid overproducing TraV, TraK and TraB of pED208
Classification: STRUCTURAL PROTEIN
Source organism: Salmonella typhi
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2021-11-02
Authors: Liu, X., Khara, P., Baker, M.L., Christie, P.J., Hu, B.
PDB entry 7spk: Models for C16 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by a plasmid overproducing TraV, TraK and TraB of pED208
Classification: STRUCTURAL PROTEIN
Source organism: Salmonella typhi
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-11-02
Authors: Liu, X., Khara, P., Baker, M.L., Christie, P.J., Hu, B.
PDB entry 7spl: [2T3] Self-assembling 3D DNA triangle with three inter-junction base pairs containing the L1 junction and a zero-linked center strand
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 6.09 Å
Deposited: 2021-11-02
Authors: Vecchioni, S., Lu, B., Sha, R., Ohayon, Y.P., Seeman, N.C.
PDB entry 7spm: Replication Initiator Protein REPE54 and cognate DNA sequence with terminal three prime phosphates chemically crosslinked (30 mg/mL EDC, 12 hours, 2 doses).
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2021-11-02
Authors: Ward, A.R., Snow, C.D.
PDB entry 7spn: Crystal structure of IS11, a thermophilic esterase
Classification: HYDROLASE
Source organism: Dehalococcoidia bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2021-11-02
Authors: Stogios, P.J., Evdokimova, E., Khusnutdinova, A., Yakunin, A.F., Savchenko, A.
PDB entry 7spo: Crystal structure of the SARS-CoV-2 receptor binding domain in complex with VNAR 3B4
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Severe acute respiratory syndrome coronavirus 2; Squalus acanthias
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-11-02
Authors: Shi, K., Aihara, H.
PDB entry 7spp: Crystal structure of the SARS-CoV-2 receptor binding domain in complex with VNAR 2C02
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Severe acute respiratory syndrome coronavirus 2; Squalus acanthias
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2021-11-02
Authors: Shi, K., Aihara, H.
PDB entry 7spq: Crystal structure of Burkholderia glumae toxoflavin biosynthesis protein ToxD
Classification: UNKNOWN FUNCTION
Source organism: Burkholderia glumae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-03
Authors: Fenwick, M.K., Philmus, B., Ealick, S.E.
PDB entry 7spr: Crystal structure of SMG1 mutant (G28C/P206C/Q34P/A37P/M176V/G177A/M294R/F278N)
Classification: HYDROLASE
Source organism: Malassezia globosa (strain ATCC MYA-4612 / CBS 7966)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2021-11-03
Authors: Li, L.L., Wang, Y.H.
PDB entry 7sps: Crystal structure of human glucose transporter GLUT3 bound with exofacial inhibitor SA47
Classification: TRANSPORT PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-11-03
Authors: Wang, N., Jiang, X., Yan, N.
PDB entry 7spt: Crystal structure of exofacial state human glucose transporter GLUT3
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-11-03
Authors: Wang, N., Jiang, X., Yan, N.
PDB entry 7spu: In situ cryo-EM structure of bacteriophage Sf6 gp3:gp7:gp5 complex in conformation 1 at 3.73A resolution
Classification: STRUCTURAL PROTEIN
Source organism: Shigella phage Sf6
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2021-11-03
Authors: Li, F., Cingolani, G., Hou, C., Yang, R.
PDB entry 7spv: Crystal structure of photoactive yellow protein (PYP); F92oCNF construct
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2021-11-03
Authors: Weaver, J.B., Kirsh, J.M., Boxer, S.G.
PDB entry 7spw: Crystal structure of photoactive yellow protein (PYP); F62oCNF construct
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2021-11-03
Authors: Weaver, J.B., Kirsh, J.M., Boxer, S.G.
PDB entry 7spx: Crystal structure of photoactive yellow protein (PYP); F28oCNF construct
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2021-11-03
Authors: Weaver, J.B., Kirsh, J.M., Boxer, S.G.
PDB entry 7spy: Get3 bound to ATP from G. intestinalis in the closed form
Classification: CHAPERONE
Source organism: Giardia intestinalis (strain ATCC 50803 / WB clone C6)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2021-11-04
Authors: Fry, M.Y., Maggiolo, A.O., Clemons Jr., W.M.
PDB entry 7spz: Nucleotide-free Get3 in two open forms
Classification: CHAPERONE
Source organism: Giardia lamblia ATCC 50803
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-11-04
Authors: Fry, M.Y., Maggiolo, A.O., Clemons Jr., W.M.
PDB entry 7sq0: Get3 bound to ADP and the transmembrane domain of the tail-anchored protein Bos1
Classification: CHAPERONE
Source organism: Giardia intestinalis (strain ATCC 50803 / WB clone C6); Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-11-04
Authors: Fry, M.Y., Maggiolo, A.O., Clemons Jr., W.M.
PDB entry 7sq1: BG505.MD39TS Env trimer in complex with Fab from antibody C05
Classification: Viral Protein/Immune System
Source organism: Human immunodeficiency virus 1; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-11-04
Authors: Moore, A., Du, J., Xu, Z., Walker, S., Kulp, D.W., Pallesen, J.
PDB entry 7sq2: Reprocessed and refined structure of Phospholipase C-beta and Gq signaling complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-11-04
Authors: Endo-Streeter, S.T., Sondek, J., Harden, T.K.
PDB entry 7sq3: Designed trefoil knot protein, variant 1
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.453 Å
Deposited: 2021-11-04
Authors: Takushi, B., Doyle, L., Stoddard, B.L., Bradley, P.
PDB entry 7sq4: Designed trefoil knot protein, variant 2
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.493 Å
Deposited: 2021-11-04
Authors: Takushi, B., Doyle, L., Stoddard, B.L., Bradley, P.
PDB entry 7sq5: Designed trefoil knot protein, variant 3
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.205 Å
Deposited: 2021-11-04
Authors: Takushi, B., Doyle, L., Stoddard, B.L., Bradley, P.
PDB entry 7sq6: Cryo-EM structure of mouse agonist ML-SA1-bound TRPML1 channel at 2.32 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2021-11-04
Authors: Gan, N., Han, Y., Jiang, Y.
PDB entry 7sq7: Cryo-EM structure of mouse PI(3,5)P2-bound TRPML1 channel at 2.41 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2021-11-04
Authors: Gan, N., Han, Y., Jiang, Y.
PDB entry 7sq8: Cryo-EM structure of mouse apo TRPML1 channel at 2.598 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.598 Å
Deposited: 2021-11-04
Authors: Gan, N., Han, Y., Jiang, Y.
PDB entry 7sq9: Cryo-EM structure of mouse temsirolimus/PI(3,5)P2-bound TRPML1 channel at 2.11 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.11 Å
Deposited: 2021-11-04
Authors: Gan, N., Han, Y., Jiang, Y.
PDB entry 7sqa: PPAR gamma LBD bound to SR10221 and SMRT corepressor motif
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.499 Å
Deposited: 2021-11-05
Authors: Frkic, R.L., Pederick, J.L., Bruning, J.B.
PDB entry 7sqb: PPAR gamma LBD bound to Inverse Agonist SR10221
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-11-05
Authors: Frkic, R.L., Pederick, J.L., Bruning, J.B.
PDB entry 7sqc: Ciliary C1 central pair apparatus isolated from Chlamydomonas reinhardtii
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-11-05
Authors: Gui, M., Wang, X., Dutcher, S.K., Brown, A., Zhang, R.
PDB entry 7sqd: Cryo-EM structure of the Achromobacter flagellar filament
Classification: STRUCTURAL PROTEIN
Source organism: Achromobacter sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-11-05
Authors: Kreutzberger, M.A., Wang, F., Egelman, E.H.
PDB entry 7sqe: Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with Jun9-84-3 inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-11-05
Authors: Osipiuk, J., Tesar, C., Endres, M., Wang, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7sqf: Structure of the human proton-activated chloride channel ASOR in activated conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-05
Authors: Long, S.B., Wang, C., Delgado, B.
PDB entry 7sqg: Structure of the human proton-activated chloride channel ASOR in resting conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-11-05
Authors: Long, S.B., Wang, C., Delgado, B.
PDB entry 7sqh: Structure of the human proton-activated chloride channel ASOR in desensitized conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-11-05
Authors: Long, S.B., Wang, C., Delgado, B.
PDB entry 7sqi: Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C14-crypto Acyl Carrier Protein, AcpP
Classification: TRANSFERASE
Source organism: Escherichia coli; Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-05
Authors: Chen, A., Mindrebo, J.T., Davis, T.D., Noel, J.P., Burkart, M.D.
PDB entry 7sqj: Cryo-EM structure of the seam subunits of the enteropathogenic E. coli O127:H6 flagellar filament
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli O127:H6
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2021-11-05
Authors: Kreutzberger, M.A.B., Chatterjee, S., Frankel, G., Egelman, E.H.
PDB entry 7sqk: Cryo-EM structure of the human augmin complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2021-11-05
Authors: Gabel, C.A., Chang, L.
PDB entry 7sql: Crystal structure of human uridine-cytidine kinase 2 complexed with a weak small molecule inhibitor
Classification: Transferase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-11-05
Authors: Mashayekh, S., Stunkard, L.M., Kienle, M., Mathews, I.I., Khosla, C.
PDB entry 7sqm: Discovery and Preclinical Pharmacology of INE963, A Potent and Fast-Acting Blood-Stage Antimalarial with a High Barrier to Resistance and Potential for Single-Dose Cure in Uncomplicated Malaria
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2021-11-05
Authors: Shu, W., Yokokawa, F.
PDB entry 7sqn: Structure of the E. coli PutA proline dehydrogenase domain (residues 86-630) complexed with (2S)-oxetane-2-carboxylic acid
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-11-05
Authors: Tanner, J.J., Bogner, A.N.
PDB entry 7sqo: Structure of the orexin-2 receptor(OX2R) bound to TAK-925, Gi and scFv16
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2021-11-05
Authors: McGrath, A.P., Kang, Y., Flinspach, M.
PDB entry 7sqp: Single chain trimer HLA-A*02:01 (Y108C) with HPV.16 E7 peptide YMLDLQPETTDL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human papillomavirus type 16; Pongo pygmaeus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2021-11-05
Authors: Finton, K.A.K., Rupert, P.B.
PDB entry 7sqq: 201Phi2-1 Chimallin Cubic (O, 24mer) assembly
Classification: STRUCTURAL PROTEIN
Source organism: Pseudomonas phage 201phi2-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2021-11-06
Authors: Laughlin, T.G., Deep, A., Prichard, A.M., Seitz, C., Gu, Y., Enustun, E., Suslov, S., Khanna, K., Birkholz, E.A., Amaro, R.E., Pogliano, J., Corbett, K.D., Villa, E.
PDB entry 7sqr: 201phi2-1 Chimallin localized tetramer reconstruction
Classification: STRUCTURAL PROTEIN
Source organism: Pseudomonas phage 201phi2-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-11-06
Authors: Laughlin, T.G., Deep, A., Prichard, A.M., Seitz, C., Gu, Y., Enustun, E., Suslov, S., Khanna, K., Birkholz, E.A., Amaro, R.E., Pogliano, J., Corbett, K.D., Villa, E.
PDB entry 7sqs: 201phi2-1 Chimallin C1 localized reconstruction
Classification: STRUCTURAL PROTEIN
Source organism: Pseudomonas phage 201phi2-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-06
Authors: Laughlin, T.G., Deep, A., Prichard, A.M., Seitz, C., Gu, Y., Enustun, E., Suslov, S., Khanna, K., Birkholz, E.A., Amaro, R.E., Pogliano, J., Corbett, K.D., Villa, E.
PDB entry 7sqt: Goslar chimallin cubic (O, 24mer) assembly
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia phage vB_EcoM_Goslar
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-11-06
Authors: Laughlin, T.G., Deep, A., Prichard, A.M., Seitz, C., Gu, Y., Enustun, E., Suslov, S., Khanna, K., Birkholz, E.A., Amaro, R.E., Pogliano, J., Corbett, K.D., Villa, E.
PDB entry 7squ: Goslar chimallin C4 tetramer localized reconstruction
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia phage vB_EcoM_Goslar
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-11-06
Authors: Laughlin, T.G., Deep, A., Prichard, A.M., Seitz, C., Gu, Y., Enustun, E., Suslov, S., Khanna, K., Birkholz, E.A., Amaro, R.E., Pogliano, J., Corbett, K.D., Villa, E.
PDB entry 7sqv: Goslar chimallin C1 localized reconstruction
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia phage vB_EcoM_Goslar
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2021-11-06
Authors: Laughlin, T.G., Deep, A., Prichard, A.M., Seitz, C., Gu, Y., Enustun, E., Suslov, S., Khanna, K., Birkholz, E.A., Amaro, R.E., Pogliano, J., Corbett, K.D., Villa, E.
PDB entry 7sqw: Structure of the KcsA-W67F mutant with the activation gate in the closed conformation
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus; Streptomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2021-11-07
Authors: Cuello, L.G., Labro, A.J.
PDB entry 7sqx: Crystal Structure of Pseudomonas aeruginosa lytic polysaccharide monooxygenase CbpD
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-11-07
Authors: Dade, C., Douzi, B., Ball, G., Voulhoux, R., Forest, K.T.
PDB entry 7sqy: CSDaV GFP mutant
Classification: VIRUS
Source organism: Aequorea victoria; Citrus sudden death-associated virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-11-07
Authors: Guo, F., Matsumura, E.E., Falk, B.W.
PDB entry 7sqz: CSDaV wild-type
Classification: VIRUS
Source organism: Citrus sudden death-associated virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-07
Authors: Guo, F., Matsumura, E.E., Falk, B.W.
PDB entry 7sr0: Single chain trimer HLA-A*02:01 (H98L, Y108C) with HPV.16 E7 peptide YMLDLQPET
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human papillomavirus type 16; Lama glama; Pongo pygmaeus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2021-11-07
Authors: Finton, K.A.K., Rupert, P.B.
PDB entry 7sr1: Crystal structure of the human SNX25 regulator of G-protein signalling (RGS) domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-11-07
Authors: Collins, B.M., Paul, B., Weeratunga, S.
PDB entry 7sr2: Crystal structure of the human SNX25 regulator of G-protein signalling (RGS) domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2021-11-07
Authors: Collins, B.M., Paul, B., Weeratunga, S.
PDB entry 7sr3: Single chain trimer HLA-A*02:01 (H98L, Y108C) with HPV.16 E7 peptide YMLDLQPETTDL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human papillomavirus type 16; Lama glama; Pongo pygmaeus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2021-11-07
Authors: Finton, K.A.K., Rupert, P.B.
PDB entry 7sr4: Single chain trimer HLA-A*02:01 (H98L, Y108C) with HPV.16 E7 peptide YMLDLQPETTDLYC
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human papillomavirus type 16; Lama glama; Pongo pygmaeus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2021-11-07
Authors: Finton, K.A.K., Rupert, P.B.
PDB entry 7sr5: Single chain trimer HLA-A*02:01 (Y108C, A163C) with Wilms tumor protein peptide RMFPNAPYL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama; Pongo pygmaeus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-11-07
Authors: Finton, K.A.K., Rupert, P.B.
PDB entry 7sr6: Human Endogenous Retrovirus (HERV-K) reverse transcriptase ternary complex with dsDNA template Primer and dNTP
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2021-11-08
Authors: Baldwin, E.T., Nichols, C.
PDB entry 7sr8: Molecular mechanism of the the wake-promoting agent TAK-925
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-08
Authors: Yin, J., Chapman, K., Lian, P., De Brabander, J.K., Rosenbaum, D.M.
PDB entry 7sr9: Human alpha-thrombin with 180- and 220- loops replaced with homologous loops from protein C
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-11-08
Authors: Di Cera, E., Ruben, E.A., Chen, Z.
PDB entry 7srk: Single chain trimer HLA-A*24:02 (Y108C, A163C) with 8mer peptide YPPVPETF
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama; Pongo pygmaeus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-11-08
Authors: Finton, K.A.K., Rupert, P.B.
PDB entry 7srq: 5-HT2B receptor bound to LSD obtained by cryo-electron microscopy (cryoEM)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-11-08
Authors: Barros-Alvarez, X., Cao, C., Panova, O., Roth, B.L., Skiniotis, G.
PDB entry 7srr: 5-HT2B receptor bound to LSD in complex with heterotrimeric mini-Gq protein obtained by cryo-electron microscopy (cryoEM)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-08
Authors: Barros-Alvarez, X., Kim, K., Panova, O., Cao, C., Roth, B.L., Skiniotis, G.
PDB entry 7srs: 5-HT2B receptor bound to LSD in complex with beta-arrestin1 obtained by cryo-electron microscopy (cryoEM)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-08
Authors: Barros-Alvarez, X., Cao, C., Panova, O., Roth, B.L., Skiniotis, G.
PDB entry 7srv: Metal dependent activation of Plasmodium falciparum M17 aminopeptidase (inactive form), spacegroup P22121
Classification: PEPTIDE BINDING PROTEIN
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2021-11-08
Authors: Webb, C.T., McGowan, S.
PDB entry 7ss1: The structure of NTMT1 in complex with compound GD433
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-11-09
Authors: Yadav, R., Guangping, D., Deng, Y., Huang, R., Noinaj, N.
PDB entry 7ss5: Activated SgrAI endonuclease DNA-bound dimer with Ca2+ and intact primary site DNA
Classification: HYDROLASE/DNA
Source organism: Streptomyces griseus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-11-09
Authors: Shan, Z., Lyumkis, D., Horton, N.C.
PDB entry 7ss6: Structure of Klebsiella LpxH in complex with JH-LPH-45
Classification: HYDROLASE/ANTIBIOTIC
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-11-09
Authors: Cho, J., Cochrane, C.S., Zhou, P.
PDB entry 7ss7: Crystal structure of Klebsiella LpxH in complex with JH-LPH-50
Classification: HYDROLASE/ANTIBIOTIC
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2021-11-09
Authors: Cho, J., Cochrane, C.S., Zhou, P.
PDB entry 7ss8: Human P300 complexed with a proline-based inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-11-10
Authors: Shewchuk, L.M., Reid, R.A.
PDB entry 7ss9: Late translocation intermediate with EF-G partially dissociated (Structure V)
Classification: RIBOSOME
Source organism: Escherichia coli 113303; Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-11-10
Authors: Carbone, C.E., Loveland, A.B., Gamper, H.B., Hou, Y., Korostelev, A.A.
PDB entry 7ssa: Cryo-EM structure of pioneer factor Cbf1 bound to the nucleosome
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-10
Authors: Eek, P., Tan, S.
PDB entry 7ssb: Co-structure of PKG1 regulatory domain with compound 33
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-11-10
Authors: Fischmann, T.O.
PDB entry 7ssc: TRL345 lineage ancestor I8 Fab bound to an HCMV gB-derived peptide
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-10
Authors: Sponholtz, M.R., McLellan, J.S.
PDB entry 7ssd: Mid translocation intermediate with EF-G bound with GDP (Structure IV)
Classification: RIBOSOME
Source organism: Escherichia coli 113303; Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-10
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7sse: Crystal structure of the WDR domain of human DCAF1 in complex with CYCA-117-70
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2021-11-10
Authors: Kimani, S., Owen, J., Li, A., Dong, A., Li, Y., Hutchinson, A., Seitova, A., Shahani, V.M., Schapira, M., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 7ssf: Light harvesting phycobiliprotein HaPE560 from the cryptophyte Hemiselmis andersenii CCMP644
Classification: PHOTOSYNTHESIS
Source organism: Hemiselmis andersenii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-11-10
Authors: Rathbone, H.W., Michie, K.A., Laos, A.L., Curmi, P.M.G.
PDB entry 7ssg: Mfd DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2021-11-11
Authors: Oakley, A.J., Xu, Z.-Q.
PDB entry 7ssh: Single chain trimer HLA-A*02:01 (Y108A) with HPV.16 E7 peptide YMLDLQPETTDLYC
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human papillomavirus type 16; Lama glama; Pongo pygmaeus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2021-11-11
Authors: Finton, K.A.K., Rupert, P.B.
PDB entry 7ssi: CRYSTAL STRUCTURE OF THE DESK:DESR-Q10A COMPLEX IN THE PHOSPHOTRANSFER STATE
Classification: TRANSFERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2021-11-11
Authors: Trajtenberg, F., Buschiazzo, A.
PDB entry 7ssj: Crystal structure of the DesK-DesR complex in the phosphatase state
Classification: TRANSFERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2021-11-11
Authors: Trajtenberg, F., Buschiazzo, A.
PDB entry 7ssk: Human P300 complexed with a glycine-based inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2021-11-11
Authors: Shewchuk, L.M., Reid, R.A.
PDB entry 7ssl: Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
Classification: RIBOSOME
Source organism: Escherichia coli 113303; Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-11-11
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7ssm: Crystal structure of human STING R232 in complex with compound 11
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2021-11-11
Authors: Sack, J.S., Critton, D.A.
PDB entry 7ssn: Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-11
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7sso: Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-11
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7ssp: Structure of the human COQ7:COQ9 complex by single-particle electron cryo-microscopy, unliganded state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-11-11
Authors: Aydin, H., Frost, A.
PDB entry 7ssq: Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075231
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Zaire ebolavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-11-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7ssr: Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075093
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Zaire ebolavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-11-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7sss: Structure of the NADH-bound human COQ7:COQ9 complex by single-particle electron cryo-microscopy
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2021-11-11
Authors: Aydin, H., Frost, A.
PDB entry 7ssu: Structure of EmrE-D3 mutant in complex with monobody L10 and methyltriphenylphosphonium
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia coli (strain K12); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.22 Å
Deposited: 2021-11-11
Authors: Kermani, A.A., Stockbridge, R.B.
PDB entry 7ssv: Structure of human Kv1.3 with Fab-ShK fusion
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Homo sapiens; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2021-11-11
Authors: Meyerson, J.R., Selvakumar, P., Smider, V., Huang, R.
PDB entry 7ssw: Late translocation intermediate with EF-G dissociated (Structure VI)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-11-11
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7ssx: Structure of human Kv1.3
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2021-11-11
Authors: Meyerson, J.R., Selvakumar, P.
PDB entry 7ssy: Structure of human Kv1.3 (alternate conformation)
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2021-11-11
Authors: Meyerson, J.R., Selvakumar, P.
PDB entry 7ssz: Structure of human Kv1.3 with A0194009G09 nanobodies
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2021-11-11
Authors: Meyerson, J.R., Selvakumar, P.
PDB entry 7st2: Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-11
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7st3: Consequences of HLA single chain trimer mutations on peptide presentation and binding affinity
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Human papillomavirus type 16; Lama glama; Pongo pygmaeus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2021-11-11
Authors: Finton, K.A.K., Rupert, P.B.
PDB entry 7st4: Calcium-saturated jGCaMP8.410.80
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-11-11
Authors: Zhang, Y., Looger, L.L.
PDB entry 7st5: Structure of Fab CC-95251 in complex with SIRP-alpha
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-11-12
Authors: Fenalti, G.
PDB entry 7st6: Pre translocation, non-rotated 70S ribosome (Structure I)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-11-12
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7st7: Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-12
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7st8: Crystal structure of 7H2.2 Fab in complex with SAS1B C-terminal region
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2021-11-12
Authors: Legg, M.S.G., Evans, S.V.
PDB entry 7st9: Open state of Rad24-RFC:9-1-1 bound to a 5' ss/dsDNA junction
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2021-11-12
Authors: Castaneda, J.C., Schrecker, M., Remus, D., Hite, R.K.
PDB entry 7sta: X-ray Crystal Structure of Truncated Human Chemokine CCL19 (7-70)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-11-12
Authors: Lewandowski, E.M., Kroeck, K., Chen, Y.