LiteFold/PDB huggingface dataset:
PDB entry 7vyh: Matrix arm of deactive state CI from Rotenone dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-14
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vyi: Membrane arm of deactive state CI from Rotenone dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-14
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vyj: The structure of GdmN in complex with carbamoyl adenylate intermediate
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-11-14
Authors: Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.
PDB entry 7vyk: Coxsackievirus B3 at pH7.4 (VP3-234Q) incubation with coxsackievirus and adenovirus receptor for 10min
Classification: VIRUS
Source organism: Coxsackievirus B3; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2021-11-14
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vyl: Coxsackievirus B3 at pH5.5 (VP3-234Q) incubation with coxsackievirus and adenovirus receptor for 20min
Classification: VIRUS
Source organism: Coxsackievirus B3; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2021-11-14
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vym: Coxsackievirus B3 at pH7.4 (VP3-234E) incubation with coxsackievirus and adenovirus receptor for 10min
Classification: VIRUS
Source organism: Coxsackievirus B3; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2021-11-14
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vyn: Matrix arm of active state CI from Q1-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2021-11-14
Authors: Gu, J., Yang, M.
PDB entry 7vyo: The structure of GdmN
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-11-14
Authors: Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.
PDB entry 7vyp: The structure of GdmN complex with the natural tetrahedral intermediate, carbamoylated derivative, and AMP
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2021-11-15
Authors: Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.
PDB entry 7vyq: Short chain dehydrogenase (SCR) cryoEM structure with NADP and ethyl 4-chloroacetoacetate
Classification: OXIDOREDUCTASE
Source organism: Candida parapsilosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2021-11-15
Authors: Li, Y.H., Zhang, R.Z., Wang, C., Forouhar, F., Clarke, O., Vorobiev, S., Singh, S., Montelione, G.T., Szyperski, T., Xu, Y., Hunt, J.F.
PDB entry 7vyr: Crystal structure of SARS-CoV-2 Spike RBD in complex with the D27 neutralizing antibody Fab fragment
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-11-15
Authors: Jeong, B.-S., Oh, B.-H.
PDB entry 7vys: Membrane arm of active state CI from Q1-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-11-15
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vyt: Crystal structure of human TIGIT(23-129) in complex with the scFv fragment of anti-TIGIT antibody MG1131
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2021-11-15
Authors: Jeong, B.-S., Nam, H., Kim, M., Oh, B.-H.
PDB entry 7vyu: Crystal structure of NatS
Classification: TRANSFERASE
Source organism: Streptomyces sp. Tu 6176
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-15
Authors: Yu, Y., He, C., Wu, L., Zhang, Y.
PDB entry 7vyv: Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Classification: LYASE
Source organism: Klebsiella phage GH-K3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2021-11-15
Authors: Cai, R., Ren, Z., Zhao, R., Wang, X., Guo, Z., Du, R., Han, W., Ru, H., Gu, J.
PDB entry 7vyw: Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with methylated histone H3K9 peptide
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-11-15
Authors: Liu, Y., Zhang, M., Min, J.
PDB entry 7vyx: Crystal structure of the selenomethionine(SeMet)-derived Cas12c1 (D969A) ternary complex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Parasutterella muris; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-11-15
Authors: Zhang, B., Lin, J.Y., Perculija, V., OuYang, S.Y.
PDB entry 7vyy: The crystal structure of Non-hydrolyzing UDPGlcNAc 2-epimerase
Classification: ISOMERASE
Source organism: Streptomyces kasugaensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.443 Å
Deposited: 2021-11-15
Authors: Li, T.L., Rattinam, R.
PDB entry 7vyz: Structure of the M. tuberculosis HtrA S367A mutant
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.401 Å
Deposited: 2021-11-15
Authors: Gupta, A.K., Gopal, B.
PDB entry 7vz0: Structure of the M. tuberculosis HtrA S407A mutant
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-11-15
Authors: Gupta, A.K., Gopal, B.
PDB entry 7vz1: Matrix arm of deactive state CI from Q1-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-11-15
Authors: Gu, J., Yang, M.
PDB entry 7vz2: Crystal structure of chromodomain of Arabidopsis LHP1
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-15
Authors: Liu, Y., Min, J.
PDB entry 7vz3: Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Classification: HYDROLASE
Source organism: Klebsiella phage GH-K3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2021-11-15
Authors: Cai, R., Ren, Z., Zhao, R., Wang, X., Guo, Z., Du, R., Han, W., Ru, H., Gu, J.
PDB entry 7vz4: Cryo-EM structure of human nucleosome core particle composed of the Widom 601L DNA sequence
Classification: NUCLEAR PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.89 Å
Deposited: 2021-11-15
Authors: Takizawa, Y., Ho, C.-H., Sato, S., Danev, R., Kurumizaka, H.
PDB entry 7vz6: The crystal structure of Non-hydrolyzing UDPGlcNAc 2-epimerase in complex with UDP-glucose
Classification: ISOMERASE
Source organism: Streptomyces kasugaensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.092 Å
Deposited: 2021-11-15
Authors: Li, T.L., Rattinam, R.
PDB entry 7vz8: Membrane arm of deactive state CI from Q1-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-11-15
Authors: Gu, J., Yang, M.
PDB entry 7vza: The crystal structure of Non-hydrolyzing UDPGlcNAc 2-epimerase in complex with UDP
Classification: ISOMERASE
Source organism: Streptomyces kasugaensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2021-11-15
Authors: Li, T.L., Rattinam, R.
PDB entry 7vzb: Cryo-EM structure of C22:0-CoA bound human very long-chain fatty acid ABC transporter ABCD1
Classification: TRANSPORT PROTEIN
Source organism: Caenorhabditis elegans; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2021-11-15
Authors: Chen, Z.P., Xu, D., Wang, L., Mao, Y.X., Yang, L., Cheng, M.T., Hou, W.T., Chen, Y.X., Zhou, C.Z.
PDB entry 7vze: Crystal structure of PTPN4 PDZ bound to the PBM of HPV16 E6
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.882 Å
Deposited: 2021-11-16
Authors: Lee, H.S., Yun, H.-Y., Ku, B.
PDB entry 7vzf: Cryo-EM structure of amyloid fibril formed by full-length human SOD1
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2021-11-16
Authors: Wang, L.Q., Ma, Y.Y., Yuan, H.Y., Zhao, K., Zhang, M.Y., Wang, Q., Huang, X., Xu, W.C., Chen, J., Li, D., Zhang, D.L., Zou, L.Y., Yin, P., Liu, C., Liang, Y.
PDB entry 7vzg: Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c (the larger form)
Classification: PHOTOSYNTHESIS
Source organism: Chloracidobacterium thermophilum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2021-11-16
Authors: Huang, G.Q., Dong, S.S., Qin, X.C., Sui, S.F.
PDB entry 7vzm: Anti-CRISPR AcrIE4-F7
Classification: VIRAL PROTEIN
Source organism: Pseudomonas citronellolis
Experimental method: SOLUTION NMR
Deposited: 2021-11-16
Authors: Hong, S.H., Lee, G., Bae, E., Suh, J.Y.
PDB entry 7vzn: The structure of GdmN in complex with carbamoyl adenylate intermediate and 20-O-methyl-19-chloroproansamitocin
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-11-16
Authors: Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.
PDB entry 7vzo: crystal structure of Domain 5-6 of filamin C from Scylla paramamosain
Classification: ALLERGEN
Source organism: Scylla paramamosain
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-11-16
Authors: He, X., Jin, T.
PDB entry 7vzp: FAD-dpendent Glucose Dehydrogenase from Aspergillus oryzae
Classification: OXIDOREDUCTASE
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2021-11-16
Authors: Nakajima, Y.
PDB entry 7vzq: The structure of GdmN V24Y/G157A/R158A/G188R mutant in complex with carbamoyl adenylate intermediate
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-11-16
Authors: Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.
PDB entry 7vzr: Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c (the smaller form)
Classification: PHOTOSYNTHESIS
Source organism: Chloracidobacterium thermophilum; Chloracidobacterium thermophilum B
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2021-11-16
Authors: Huang, G.Q., Dong, S.S., Qin, X.C., Sui, S.F.
PDB entry 7vzs: FAD-dpendent Glucose Dehydrogenase complexed with an inhibitor at pH7.56
Classification: OXIDOREDUCTASE
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-16
Authors: Nakajima, Y.
PDB entry 7vzt: A human neutralizing antibody targeting SARS-CoV-2 RBD
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2021-11-16
Authors: Wang, F.Z., Wang, Y., Tan, X.W., Shi, R., Yan, J.H.
PDB entry 7vzu: The structure of GdmN Y82F mutant
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-11-16
Authors: Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.
PDB entry 7vzv: Active state CI from Q10 dataset, Subclass 1
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-16
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vzw: Active state CI from Q10 dataset, Subclass 2
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-16
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vzy: The structure of GdmN complex with AMP and 20-O-methyl-19-chloroproansamitocin
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2021-11-17
Authors: Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.
PDB entry 7vzz: The structure of GdmN in complex with the natural tetrahedral intermediate, carbamoyl adenylate, and 20-O-methyl-19-chloroproansamitocin
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-11-17
Authors: Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.
PDB entry 7w00: Deactive state CI from Q10 dataset, Subclass 1
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-11-17
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w01: Cryo-EM structure of nucleotide-free ABCA3
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-17
Authors: Xie, T., Zhang, Z.K., Yue, J., Gong, X.
PDB entry 7w02: Cryo-EM structure of ATP-bound ABCA3
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-17
Authors: Xie, T., Zhang, Z.K., Yue, J., Gong, X.
PDB entry 7w05: 12 mutant Ribonuclease from Hericium erinaceus GMP binding form
Classification: DNA BINDING PROTEIN
Source organism: Hericium erinaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2021-11-17
Authors: Takebe, K., Chida, T., Suzuki, M., Itagaki, T., Morita, Y., Uzawa, N., Kobayashi, H.
PDB entry 7w06: Itaconate inducible LysR-Type Transcriptional regulator (ITCR) in complex with itaconate (SeMet labeled), Space group C121.
Classification: TRANSCRIPTION
Source organism: Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-11-17
Authors: Sun, P.K., Wang, B., Wang, Z.X., Qi, S., Li, X.J.
PDB entry 7w07: Itaconate inducible LysR-Type Transcriptional regulator (ITCR) in complex with itaconate, Space group C121.
Classification: TRANSCRIPTION
Source organism: Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2021-11-17
Authors: Sun, P.K., Wang, B., Li, X.J.
PDB entry 7w08: Itaconate inducible LysR-Type Transcriptional regulator (ITCR) in APO form, Space group P1.
Classification: TRANSCRIPTION
Source organism: Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2021-11-17
Authors: Sun, P.K., Wang, B., Li, X.J.
PDB entry 7w09: UGT74AN2, Plant Steroid Glycosyltransferase
Classification: TRANSFERASE
Source organism: Calotropis gigantea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-11-18
Authors: Wei, H., Feng, L.
PDB entry 7w0a: dmDicer2-LoqsPD-dsRNA Dimer status
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2021-11-18
Authors: Su, S., Wang, J., Wang, H.W., Ma, J.
PDB entry 7w0b: Dicer2-LoqsPD complex at apo status
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2021-11-18
Authors: Su, S., Wang, J., Wang, H.W., Ma, J.
PDB entry 7w0c: Dicer2-Loqs-PD-dsRNA complex at early-translocation state
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2021-11-18
Authors: Su, S., Wang, J., Wang, H.W., Ma, J.
PDB entry 7w0d: Dicer2-LoqsPD-dsRNA complex at mid-translocation state
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.18 Å
Deposited: 2021-11-18
Authors: Su, S., Wang, J., Wang, H.W., Ma, J.
PDB entry 7w0e: dmDicer2-LoqsPD-dsRNA Active-dicing status
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.03 Å
Deposited: 2021-11-18
Authors: Su, S., Wang, J., Wang, H.W., Ma, J.
PDB entry 7w0f: dmDicer2-LoqsPD-dsRNA Post-dicing status
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.55 Å
Deposited: 2021-11-18
Authors: Su, S., Wang, J., Wang, H.W., Ma, J.
PDB entry 7w0g: Human PPAR delta ligand binding domain in complex with a synthetic agonist H11
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.443 Å
Deposited: 2021-11-18
Authors: Dai, L., Sun, H.B., Yuan, H.L., Feng, Z.Q.
PDB entry 7w0h: Deactive state CI from Q10 dataset, Subclass 2
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-11-18
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w0i: Crystal structure of threonine aldolase from Mycobacterium vanbaalenii
Classification: TRANSFERASE
Source organism: Mycolicibacterium vanbaalenii (strain DSM 7251 / JCM 13017 / BCRC 16820 / KCTC 9966 / NRRL B-24157 / PYR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-11-18
Authors: Wu, B.
PDB entry 7w0j: Acyl-CoA dehydrogenase, Tfu_1647
Classification: FLAVOPROTEIN
Source organism: Thermobifida fusca (strain YX)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.13 Å
Deposited: 2021-11-18
Authors: Liu, L.X., Zhou, S.H., Deng, Y.
PDB entry 7w0k: plant glycosyltransferase
Classification: TRANSFERASE
Source organism: Calotropis gigantea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2021-11-18
Authors: Wei, H., Feng, L.
PDB entry 7w0l: Cryo-EM structure of a dimeric GPCR-Gi complex with small molecule
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2021-11-18
Authors: Yue, Y., Liu, L.E., Wu, L.J., Xu, F., Hanson, M.
PDB entry 7w0m: Cryo-EM structure of a monomeric GPCR-Gi complex with small molecule
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2021-11-18
Authors: Xu, F., Yue, Y., Liu, L.E., Wu, L.J., Hanson, M.
PDB entry 7w0n: Cryo-EM structure of a dimeric GPCR-Gi complex with peptide
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.21 Å
Deposited: 2021-11-18
Authors: Xu, F., Yue, Y., Wu, L.J., Liu, L.E., Hanson, M.
PDB entry 7w0o: Cryo-EM structure of a monomeric GPCR-Gi complex with peptide
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2021-11-18
Authors: Xu, F., Yue, Y., Liu, L.E., Wu, L.J., Hanson, M.
PDB entry 7w0p: Cryo-EM structure of a GPCR-Gi complex with peptide
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2021-11-18
Authors: Xu, F., Yue, Y., Liu, L.E., Wu, L.J., Hanson, M.
PDB entry 7w0q: TRIM7 in complex with C-terminal peptide of 2C
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2021-11-18
Authors: Zhang, H., Liang, X., Li, X.Z.
PDB entry 7w0r: Active state CI from Q10-NADH dataset, Subclass 1
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-11-18
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w0s: TRIM7 in complex with C-terminal peptide of 2C
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-11-18
Authors: Zhang, H., Liang, X., Li, X.Z.
PDB entry 7w0t: TRIM7 in complex with C-terminal peptide of 2C
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2021-11-18
Authors: Zhang, H., Liang, X., Li, X.Z.
PDB entry 7w0v: C4'-SCF3-DT modifeid DNA-DNA duplex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2021-11-18
Authors: Li, Q., Trajkovski, M., Fan, C., Chen, J., Zhou, Y., Lu, K., Li, H., Su, X., Xi, Z., Plavec, J., Zhou, C.
PDB entry 7w0w: The novel membrane-proximal sensing mechanism in a broad-ligand binding chemoreceptor McpA of Bacillus velezensis
Classification: PROTEIN BINDING
Source organism: Bacillus velezensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.247 Å
Deposited: 2021-11-18
Authors: Feng, H.C., Shen, Q.R., Zhang, R.F.
PDB entry 7w0x: Tetrameric antiparallel G-quadruplex formed by natural human telomeric sequence
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2021-11-18
Authors: Jing, H.T., Fu, W.Q.
PDB entry 7w0y: Active state CI from Q10-NADH dataset, Subclass 2
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-11-18
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w0z: Glycosyltranferase UGT74AN2
Classification: TRANSFERASE
Source organism: Calotropis gigantea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-11-18
Authors: Wei, H., Feng, L.
PDB entry 7w10: UGT74AN2
Classification: TRANSFERASE
Source organism: Calotropis gigantea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-11-18
Authors: Wei, H., Long, F.
PDB entry 7w11: glycosyltransferase
Classification: TRANSFERASE
Source organism: Calotropis gigantea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-11-19
Authors: Wei, H., Feng, L.
PDB entry 7w12: Complex structure of alginate lyase AlyB-OU02 with G9
Classification: LYASE
Source organism: Vibrio splendidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-11-19
Authors: Liu, W.Z., Lyu, Q.Q., Zhang, K.K.
PDB entry 7w13: Complex structure of alginate lyase PyAly with M8
Classification: LYASE
Source organism: Neopyropia yezoensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-11-19
Authors: Liu, W.Z., Lyu, Q.Q., Li, Z.J., Zhang, K.K.
PDB entry 7w14: Coxsackievirus B3 at pH7.4 (VP3-234E) incubation with coxsackievirus and adenovirus receptor for 20min
Classification: VIRUS
Source organism: Coxsackievirus B3; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2021-11-19
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7w15: Crystal Structure of MPH-E in complex with GTP and Erythromycin
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2021-11-19
Authors: Qi, Q., Kuang, L., Jiang, Y.
PDB entry 7w16: Complex structure of alginate lyase AlyV with M8
Classification: LYASE
Source organism: Vibrio pelagius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-11-19
Authors: Liu, W.Z., Lyu, Q.Q., Li, Z.J., Zhang, K.K.
PDB entry 7w17: Coxsackievirus B3 full particle at pH7.4 (VP3-234E)
Classification: VIRUS
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-11-19
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7w18: Complex structure of alginate lyase PyAly with M5
Classification: LYASE
Source organism: Neopyropia yezoensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-19
Authors: Liu, W.Z., Lyu, Q.Q., Zhang, K.K.
PDB entry 7w19: Crystal Structure of Acinetobacter baumannii MPH-E
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-11-19
Authors: Qi, Q., Kuang, L., Jiang, Y.
PDB entry 7w1a: Crystal Structure of MPH-E in complex with GMP and Azithromycin
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2021-11-19
Authors: Qi, Q., Kuang, L., Jiang, Y.
PDB entry 7w1b: Glycosyltransferase
Classification: TRANSFERASE
Source organism: Calotropis gigantea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-11-19
Authors: Wei, H., Feng, L.
PDB entry 7w1c: Crystal structure of Klebsiella pneumoniae K1 capsule-specific polysaccharide lyase in a P1 crystal form
Classification: VIRAL PROTEIN
Source organism: Klebsiella phage NTUH-K2044-K1-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2021-11-19
Authors: Tu, I.F., Huang, K.F., Wu, S.H.
PDB entry 7w1d: Crystal structure of Klebsiella pneumoniae K1 capsule-specific polysaccharide lyase in a C2 crystal form
Classification: VIRAL PROTEIN
Source organism: Klebsiella phage NTUH-K2044-K1-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2021-11-19
Authors: Tu, I.F., Ko, T.P., Huang, K.F., Wu, S.H.
PDB entry 7w1e: Crystal structure of Klebsiella pneumoniae K1 capsule-specific polysaccharide lyase in complex with products
Classification: VIRAL PROTEIN
Source organism: Klebsiella phage NTUH-K2044-K1-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2021-11-19
Authors: Tu, I.F., Huang, K.F., Wu, S.H.
PDB entry 7w1f: Crystal structure of the dNTP triphosphohydrolase PA1124 from Pseudomonas aeruginosa
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-11-19
Authors: Oh, H.B., Song, W.S., Lee, K.C., Park, S.C., Yoon, S.I.
PDB entry 7w1g: Crystal structure of YfiH with C107A mutation in complex with UDP-MurNAc-L-Serine
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2021-11-19
Authors: Lee, S.H., Hsieh, K.Y., Lee, M.S., Chang, C.I.
PDB entry 7w1h: glycosyltransferase
Classification: TRANSFERASE
Source organism: Calotropis gigantea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-11-19
Authors: Wei, H., Feng, L.
PDB entry 7w1i: Crystal structure of carboxylesterase mutant from Thermobifida fusca with C8X and C9C
Classification: HYDROLASE
Source organism: Thermobifida fusca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2021-11-19
Authors: Han, X., Gerlis, H., Li, Z., Gao, J., Wei, R., Liu, W.
PDB entry 7w1j: Crystal structure of carboxylesterase from Thermobifida fusca with J1K
Classification: HYDROLASE
Source organism: Thermobifida fusca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-11-19
Authors: Han, X., Gerlis, H., Li, Z., Gao, J., Wei, R., Liu, W.
PDB entry 7w1k: Crystal structure of carboxylesterase from Thermobifida fusca
Classification: HYDROLASE
Source organism: Thermobifida fusca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2021-11-19
Authors: Han, X., Gerlis, H., Li, Z., Gao, J., Wei, R., Liu, W.
PDB entry 7w1l: Crystal structure of carboxylesterase mutant from Thermobifida fusca with C8X
Classification: HYDROLASE
Source organism: Thermobifida fusca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2021-11-19
Authors: Han, X., Gerlis, H., Li, Z., Gao, J., Wei, R., Liu, W.
PDB entry 7w1m: Cryo-EM structure of human cohesin-CTCF-DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2021-11-19
Authors: Shi, Z.B., Bai, X.C., Yu, H.
PDB entry 7w1n: Complex structure of a leaf-branch compost cutinase variant LCC ICCG_KRP
Classification: HYDROLASE
Source organism: Unknown prokaryotic organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2021-11-19
Authors: Niu, D., Zeng, W., Huang, J.W., Chen, C.C., Liu, W.D., Guo, R.T.
PDB entry 7w1o: Deactive state CI from Q10-NADH dataset, Subclass 1
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-11-19
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w1p: Deactive state CI from Q10-NADH dataset, Subclass 2
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-19
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w1q: The structure of the Arabidopsis thaliana guanosine deaminase mutant E82Q complexed with 2'-O-methylguanosine
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-11-19
Authors: Xie, W., Jia, Q., Zeng, H.
PDB entry 7w1r: Crystal structure of human Suv3 monomer
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-11-20
Authors: Jain, M., Yuan, H.S.
PDB entry 7w1s: Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-007
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.997 Å
Deposited: 2021-11-20
Authors: Yang, J., Lin, S., Sun, H.L., Lu, G.W.
PDB entry 7w1t: Active state CI from Rotenone dataset, Subclass 1
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-11-20
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w1u: Active state CI from Rotenone dataset, Subclass 2
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-20
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w1v: Active state CI from Rotenone-NADH dataset, Subclass 1
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-11-20
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w1w: NADPH-bound AKR4C17 mutant F291D
Classification: OXIDOREDUCTASE
Source organism: Echinochloa colona
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2021-11-21
Authors: Li, H., Yang, Y., Hu, Y., Chen, C.-C., Huang, J.-W., Min, J., Dai, L., Guo, R.-T.
PDB entry 7w1x: Crystal structure of AKR4C16 bound with NADPH
Classification: OXIDOREDUCTASE
Source organism: Echinochloa colona
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-11-21
Authors: Li, H., Yang, Y., Hu, Y., Chen, C.-C., Huang, J.-W., Min, J., Dai, L., Guo, R.-T.
PDB entry 7w1y: Human MCM double hexamer bound to natural DNA duplex (polyAT/polyTA)
Classification: CELL CYCLE/DNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2021-11-21
Authors: Li, J., Dong, J., Dang, S., Zhai, Y.
PDB entry 7w1z: Active state CI from Rotenone-NADH dataset, Subclass 2
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-11-21
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w20: Active state CI from Rotenone-NADH dataset, Subclass 3
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-11-21
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w21: Structure of the M. tuberculosis HtrA N269A mutant
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-11-21
Authors: Gupta, A.K., Gopal, B.
PDB entry 7w22: Structure of the M. tuberculosis HtrA K436A mutant
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2021-11-21
Authors: Gupta, A.K., Gopal, B.
PDB entry 7w23: Structure of the M. tuberculosis HtrA S363A mutant
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-11-21
Authors: Gupta, A.K., Gopal, B.
PDB entry 7w24: Structure of the M. tuberculosis HtrA N383A mutant
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-11-21
Authors: Gupta, A.K., Gopal, B.
PDB entry 7w25: Structure of the M. tuberculosis HtrA S413A mutant
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2021-11-21
Authors: Gupta, A.K., Gopal, B.
PDB entry 7w26: monolignol ferulate transferase
Classification: TRANSFERASE
Source organism: Angelica sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2021-11-22
Authors: Xi, L., Shuliu, D., Yue, F., Yi, Z.
PDB entry 7w27: Crystal structure of BEND3-BEN4-DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2021-11-22
Authors: Zheng, L., Ren, A.
PDB entry 7w28: Crystal Structure of SETD3-SAH in complex with betaA-4PyrAla73 peptide
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2021-11-22
Authors: Li, H., Ma, H.
PDB entry 7w29: Crystal Structure of SETD3-SAH in complex with betaA-Orn73 peptide
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-11-23
Authors: Li, H., Ma, H.
PDB entry 7w2a: gliadinase Bga1903
Classification: LYASE
Source organism: Burkholderia gladioli pv. gladioli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-11-23
Authors: Meng, M.
PDB entry 7w2b: The closed conformation of the sigma-1 receptor from Xenopus laevis
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.203 Å
Deposited: 2021-11-23
Authors: Meng, F., Sun, Z., Zhou, X.
PDB entry 7w2c: The closed conformation of the sigma-1 receptor from Xenopus laevis complexed with PRE084
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.335 Å
Deposited: 2021-11-23
Authors: Meng, F., Sun, Z., Zhou, X.
PDB entry 7w2d: The closed conformation of the sigma-1 receptor from Xenopus laevis complexed with S1RA
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.471 Å
Deposited: 2021-11-23
Authors: Meng, F., Sun, Z., Zhou, X.
PDB entry 7w2e: An open-like conformation of the sigma-1 receptor from Xenopus laevis
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.557 Å
Deposited: 2021-11-23
Authors: Meng, F., Sun, Z., Zhou, X.
PDB entry 7w2f: An open-like conformation of the sigma-1 receptor from Xenopus laevis complexed with PRE084 by co-crystallization
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2021-11-23
Authors: Meng, F., Sun, Z., Zhou, X.
PDB entry 7w2g: An open-like conformation of the sigma-1 receptor from Xenopus laevis complexed with PRE084 by soaking
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.851 Å
Deposited: 2021-11-23
Authors: Meng, F., Sun, Z., Zhou, X.
PDB entry 7w2h: A double cysteine variant of the sigma-1 receptor from Xenopus laevis complexed with S1RA
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.796 Å
Deposited: 2021-11-23
Authors: Meng, F., Sun, Z., Zhou, X.
PDB entry 7w2i: Crystal structure of LOG (Rv1205) from Mycobacterium tuberculosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-23
Authors: Shang, L., Zhang, G.
PDB entry 7w2j: Cryo-EM Structure of Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus
Classification: OXIDOREDUCTASE
Source organism: Gluconobacter japonicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-11-24
Authors: Suzuki, Y., Makino, F., Miyata, T., Tanaka, H., Namba, K., Sowa, K., Kitazumi, Y., Shirai, O.
PDB entry 7w2k: Deactive state CI from Rotenone-NADH dataset, Subclass 1
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-24
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w2l: Deactive state CI from Rotenone-NADH dataset, Subclass 2
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-11-24
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w2o: Crystal structure of Pseudomonas aeruginosa transcriptional regulator PvrA in the wide conformation
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2021-11-24
Authors: Bao, R., Zhu, Y.B.
PDB entry 7w2p: Tudor domain of SMN in complex with a small molecule
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2021-11-24
Authors: Li, W., Arrowsmith, C.H., Edwards, A.M., Liu, Y., Min, J.
PDB entry 7w2q: Crystal structure of Pseudomonas aeruginosa transcriptional regulator PvrA in the narrow conformation
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-24
Authors: Bao, R., Zhu, Y.B.
PDB entry 7w2r: Active state CI from DQ-NADH dataset, Subclass 1
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-24
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w2s: Crystal structure of TxGH116 E730A mutant from Thermoanaerobacterium xylanolyticum with glucose
Classification: HYDROLASE
Source organism: Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-11-24
Authors: Huang, M., Pengthaisong, S., Charoenwattanasatien, R., Jitonnom, J., Ketudat Cairns, J.R.
PDB entry 7w2t: Crystal structure of TxGH116 E730Q mutant from Thermoanaerobacterium xylanolyticum with glucose
Classification: HYDROLASE
Source organism: Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-11-24
Authors: Huang, M., Pengthaisong, S., Charoenwattanasatien, R., Jitonnom, J., Ketudat Cairns, J.R.
PDB entry 7w2u: Active state CI from DQ-NADH dataset, Subclass 2
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-11-24
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w2v: Crystal structure of TxGH116 R786A mutant from Thermoanaerobacterium xylanolyticum with glucose
Classification: HYDROLASE
Source organism: Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-24
Authors: Huang, M., Pengthaisong, S., Charoenwattanasatien, R., Jitonnom, J., Ketudat Cairns, J.R.
PDB entry 7w2w: Crystal structure of TxGH116 R786K mutant from Thermoanaerobacterium xylanolyticum with glucose
Classification: HYDROLASE
Source organism: Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2021-11-24
Authors: Huang, M., Pengthaisong, S., Charoenwattanasatien, R., Jitonnom, J., Ketudat Cairns, J.R.
PDB entry 7w2x: Crystal structure of TxGH116 R786K mutant from Thermoanaerobacterium xylanolyticum
Classification: HYDROLASE
Source organism: Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-24
Authors: Huang, M., Pengthaisong, S., Charoenwattanasatien, R., Jitonnom, J., Ketudat Cairns, J.R.
PDB entry 7w2y: Active state CI from DQ-NADH dataset, Subclass 3
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-11-24
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w2z: Cryo-EM structure of the ghrelin-bound human ghrelin receptor-Go complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-11-24
Authors: Qin, J., Ming, Q., Ji, S., Mao, C., Shen, D., Zhang, Y.
PDB entry 7w30: Tudor domain of SMN in complex with a small molecule
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-24
Authors: Li, W., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Liu, Y., Min, J.
PDB entry 7w31: Deactive state CI from DQ-NADH dataset, Subclass 1
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-24
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w32: Deactive state CI from DQ-NADH dataset, Subclass 2
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-24
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w33: The crystal structure of human CtsL in complex with 14a
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-11-25
Authors: Zhao, Y., Shao, M., Zhao, J., Yang, H., Rao, Z.
PDB entry 7w34: The crystal structure of human CtsL in complex with 14b
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2021-11-25
Authors: Zhao, Y., Shao, M., Zhao, J., Yang, H., Rao, Z.
PDB entry 7w35: Deactive state CI from DQ-NADH dataset, Subclass 3
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-11-25
Authors: Gu, J.K., Yang, M.J.
PDB entry 7w36: Crystal structure of human Atg5 complexed with a stapled peptide
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-11-25
Authors: Kurata, I., Matoba, K., Noda, N.N.
PDB entry 7w37: Structure of USP14-bound human 26S proteasome in state EA1_UBL
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w38: Structure of USP14-bound human 26S proteasome in state EA2.0_UBL
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w39: Structure of USP14-bound human 26S proteasome in state EA2.1_UBL
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3a: Structure of USP14-bound human 26S proteasome in substrate-engaged state ED4_USP14
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3b: Structure of USP14-bound human 26S proteasome in substrate-engaged state ED5_USP14
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3c: Structure of USP14-bound human 26S proteasome in substrate-engaged state ED0_USP14
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3d: Crystal structure of BRD4 bromodomain 1 (BD1) in complex with N2-(1,2,3-benzotriazol-5-yl)-N3-(dimethylsulfamoyl)-N6-[(2S)-1-methoxypropan-2-yl]pyridine-2,3,6-triamine
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-11-25
Authors: Park, T.H., Lee, B.I.
PDB entry 7w3e: Bovine cytochrome c oxidese in CN-bound fully reduced state at 50 K
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-11-25
Authors: Tsukihara, T., Shimada, A.
PDB entry 7w3f: Structure of USP14-bound human 26S proteasome in substrate-engaged state ED1_USP14
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3g: Structure of USP14-bound human 26S proteasome in substrate-engaged state ED2.0_USP14
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3h: Structure of USP14-bound human 26S proteasome in substrate-engaged state ED2.1_USP14
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3i: Structure of USP14-bound human 26S proteasome in substrate-inhibited state SB_USP14
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3j: Structure of USP14-bound human 26S proteasome in substrate-inhibited state SC_USP14
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3k: Structure of USP14-bound human 26S proteasome in substrate-inhibited state SD4_USP14
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3l: Crystal structure of LSD1 in complex with cis-4-Br-2,5-F2-PCPA (S1024)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2021-11-25
Authors: Niwa, H., Sato, S., Umehara, T.
PDB entry 7w3m: Structure of USP14-bound human 26S proteasome in substrate-inhibited state SD5_USP14
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-11-25
Authors: Zhang, S., Zou, S., Yin, D., Wu, Z., Mao, Y.
PDB entry 7w3n: Crystal structure of Ufm1 fused to UFBP1 UFIM
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-11-25
Authors: Noda, N.N.
PDB entry 7w3o: Crystal structure of human CYB5R3
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2021-11-25
Authors: Noda, N.N.