LiteFold/PDB huggingface dataset:
PDB entry 6pth: Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Pseudomonas aeruginosa bound to griselimycin
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2019-07-15
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6pti: STRUCTURE OF FORM III CRYSTALS OF BOVINE PANCREATIC TRYPSIN INHIBITOR
Classification: PROTEINASE INHIBITOR (TRYPSIN)
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 1987-05-13
Authors: Wlodawer, A.
PDB entry 6ptj: Structure of Ctf4 trimer in complex with one CMG helicase
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-07-15
Authors: Yuan, Z., Georgescu, R., Bai, L., Santos, R., Donnell, M., Li, H.
PDB entry 6ptk: Crystal structure of the sulfatase PsS1_NC C84A with bound sulfate ion
Classification: HYDROLASE
Source organism: Pseudoalteromonas fuliginea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-07-16
Authors: Hettle, A.G., Boraston, A.B.
PDB entry 6ptl: Structure of the self-association domain of the chromatin looping factor LDB1
Classification: GENE REGULATION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-07-16
Authors: Macindoe, I., Silva, A., Guss, J.M., Mackay, J.P., Matthews, J.M.
PDB entry 6ptm: Crystal structure of apo exo-carrageenase GH42 from Bacteroides ovatus
Classification: HYDROLASE
Source organism: Bacteroides ovatus CL02T12C04
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-07-16
Authors: Hettle, A.G., Boraston, A.B.
PDB entry 6ptn: Structure of Ctf4 trimer in complex with two CMG helicases
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.8 Å
Deposited: 2019-07-16
Authors: Yuan, Z., Georgescu, R., Bai, L., Santos, R., Donnell, M., Li, H.
PDB entry 6pto: Structure of Ctf4 trimer in complex with three CMG helicases
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2019-07-16
Authors: Yuan, Z., Georgescu, R., Bai, L., Santos, R., Donnell, M., Li, H.
PDB entry 6ptp: Joint X-ray/neutron structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with tetrahedral intermediate mimic KVS-1
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2019-07-16
Authors: Kovalevsky, A., Das, A.
PDB entry 6ptq: Dark, Room Temperature, PCM Myxobacterial Phytochrome, P2, Wild Type
Classification: SIGNALING PROTEIN
Source organism: Stigmatella aurantiaca DW4/3-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-07-16
Authors: Pandey, S., Schmidt, M., Stojkovic, E.A.
PDB entry 6ptr: Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Bartonella birtlesii bound to griselimycin
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Bartonella birtlesii LL-WM9; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-07-16
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6pts: NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state A)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2019-07-16
Authors: Fang, Z., Lee, K., Gasmi-Seabrook, G., Ikura, M., Marshall, C.B.
PDB entry 6ptt: Soluble model of Arabidopsis thaliana CuA (Tt3LAt)
Classification: ELECTRON TRANSPORT, OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2019-07-16
Authors: Lisa, M.N., Giannini, E., Llases, M.E., Alzari, P.M., Vila, A.J.
PDB entry 6ptu: Crystal Structure of Class D Beta-lactamase OXA-48 with Imipenem
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.004 Å
Deposited: 2019-07-16
Authors: Akhtar, A., Chen, Y.
PDB entry 6ptv: Crystal structure of a DnaN sliding clamp (DNA polymerase III subunit beta) from Rickettsia rickettsii bound to griselimycin
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Rickettsia rickettsii (strain Sheila Smith); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-07-16
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6ptw: NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state B)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2019-07-16
Authors: Fang, Z., Lee, K., Gasmi-Seabrook, G., Ikura, M., Marshall, C.B.
PDB entry 6ptx: Dark, 100K, PCM Myxobacterial Phytochrome, P2, Wild Type,
Classification: SIGNALING PROTEIN
Source organism: Stigmatella aurantiaca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-07-16
Authors: Pandey, S., Schmidt, M., Stojkovic, E.A.
PDB entry 6pty: Soluble model of human CuA (Tt3Lh)
Classification: ELECTRON TRANSPORT, OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2019-07-16
Authors: Giannini, E., Lisa, M.N., Morgada, M.N., Alzari, P.M., Vila, A.J.
PDB entry 6ptz: Crystal structure of pigeon Cryptochrome 4 mutant Y319D in complex with flavin adenine dinucleotide
Classification: CIRCADIAN CLOCK PROTEIN
Source organism: Columba livia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.793 Å
Deposited: 2019-07-16
Authors: Zoltowski, B.D., Chelliah, Y., Wickramaratne, A.C., Jarocha, L., Karki, N., Mouritsen, H., Hore, P.J., Hibbs, R.E., Green, C.B., Takahashi, J.S.
PDB entry 6pu0: Pigeon Cryptochrome4 bound to flavin adenine dinucleotide
Classification: CIRCADIAN CLOCK PROTEIN
Source organism: Columba livia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8979 Å
Deposited: 2019-07-16
Authors: Zoltowski, B.D., Chelliah, Y., Wickramaratne, A.C., Jarocha, L., Karki, N., Mouritsen, H., Hore, P.J., Hibbs, R.E., Green, C.B., Takahashi, J.S.
PDB entry 6pu1: Cysteine stabilized hexameric HIV-1 CA in complex with SEC24C peptide
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2019-07-16
Authors: Lindenberger, J.J., Kvaratskhelia, M.
PDB entry 6pu2: Dark, Mutant H275T , 100K, PCM Myxobacterial Phytochrome, P2
Classification: SIGNALING PROTEIN
Source organism: Stigmatella aurantiaca (strain DW4/3-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-07-16
Authors: Pandey, S., Schmidt, M., Stojkovic, E.A.
PDB entry 6pu3: ABC transporter-associated periplasmic binding protein DppA from Helicobacter pylori
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli; Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-07-16
Authors: Rahman, M.M., Machuca, M.A., Khan, M.F., Barlow, C.K., Schittenhelm, R.B., Roujeinikova, A.
PDB entry 6pu4: MicroED structure of proteinase K recorded on Falcon III
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.1 Å
Deposited: 2019-07-17
Authors: Hattne, J., Martynowycz, M.W., Penzcek, P.A., Gonen, T.
PDB entry 6pu5: MicroED structure of proteinase K recorded on CetaD
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.7 Å
Deposited: 2019-07-17
Authors: Hattne, J., Martynowycz, M.W., Penzcek, P.A., Gonen, T.
PDB entry 6pu6: CobT from Methanocaldococcus jannaschii in complex with Alpha-Ribozole 5'-Phosphate, Nicotinic Acid, and Nicotinic Acid Mononucleotide
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.293 Å
Deposited: 2019-07-17
Authors: Schwarzwalder, A.H., Jeter, V.L., Vecellio, A.A., Erpenbach, E., Escalante-Semerena, J.C., Rayment, I.
PDB entry 6pu7: Human IDO1 in complex with compound 17 (N-{2-[(4-{N-[(7S)-4-fluorobicyclo[4.2.0]octa-1,3,5-trien-7-yl]-N'-hydroxycarbamimidoyl}-1,2,5-oxadiazol-3-yl)sulfanyl]ethyl}acetamide)
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2019-07-17
Authors: Lesburg, C.A.
PDB entry 6pu8: Room temperature X-ray structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with tetrahedral intermediate of keto-darunavir
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-07-17
Authors: Kovalevsky, A., Das, A.
PDB entry 6pu9: Crystal Structure of the Type B Chloramphenicol O-Acetyltransferase from Vibrio vulnificus
Classification: TRANSFERASE
Source organism: Vibrio vulnificus (strain CMCP6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-07-17
Authors: Kim, Y., Maltseva, N., Mulligan, R., Grimshaw, S., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6pua: The 2.0 A Crystal Structure of the Type B Chloramphenicol Acetyltransferase from Vibrio cholerae
Classification: TRANSFERASE
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-07-18
Authors: Kim, Y., Maltseva, N., Stam, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6pub: Crystal Structure of the Type B Chloramphenicol Acetyltransferase from Vibrio cholerae in the Complex with Crystal Violet
Classification: TRANSFERASE
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2019-07-18
Authors: Kim, Y., Maltseva, N., Kuhn, M., Stam, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6puc: Structure of human MAIT A-F7 TCR in complex with human MR1-5-OP-RU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-07-18
Authors: Awad, W., Rossjohn, J.
PDB entry 6pud: Structure of human MAIT A-F7 TCR in complex with human MR1-5'OH-Pentyl-5-OP-U
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-07-18
Authors: Awad, W., Rossjohn, J.
PDB entry 6pue: Structure of human MAIT A-F7 TCR in complex with human MR1-4'D-5-OP-RU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-07-18
Authors: Awad, W., Rossjohn, J.
PDB entry 6puf: Structure of human MAIT A-F7 TCR in complex with human MR1-5'D-5-OP-RU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2019-07-18
Authors: Awad, W., Rossjohn, J.
PDB entry 6pug: Structure of human MAIT A-F7 TCR in complex with human MR1-2`OH-Ethyl-5-OP-U
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-07-18
Authors: Awad, W., Rossjohn, J.
PDB entry 6puh: Structure of human MAIT A-F7 TCR in complex with human MR1-Ribityl-less
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2019-07-18
Authors: Awad, W., Keller, A.N., Rossjohn, J.
PDB entry 6pui: Structure of human MAIT A-F7 TCR in complex with human MR1-4'OH-Butyl-5-OP-U
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2019-07-18
Authors: Awad, W., Keller, A.N., Rossjohn, J.
PDB entry 6puj: Structure of human MAIT A-F7 TCR in complex with human MR1-3`OH-Propyl-5-OP-U
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2019-07-18
Authors: Awad, W., Keller, A.N., Rossjohn, J.
PDB entry 6puk: Structure of human MAIT A-F7 TCR in complex with human MR1-JYM72
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2019-07-18
Authors: Awad, W., Keller, A.N., Rossjohn, J.
PDB entry 6pul: Structure of human MAIT A-F7 TCR in complex with human MR1 3'D-5-OP-RU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2019-07-18
Authors: Awad, W., Keller, A.N., Rossjohn, J.
PDB entry 6pum: Structure of human MAIT A-F7 TCR in complex with human MR1-2'D-5-OP-RU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2019-07-18
Authors: Awad, W., Keller, A.N., Rossjohn, J.
PDB entry 6pun: Crystal structure of a ternary complex of FBF-2 with LST-1 (site B) and compact FBE RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.099 Å
Deposited: 2019-07-18
Authors: Qiu, C., Campbell, Z.T., Hall, T.M.T.
PDB entry 6puo: Human TRPM2 in the apo state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-07-18
Authors: Du, J., Lu, W., Huang, Y.
PDB entry 6pup: 1.9 A crystal structure of flavodoxin-like domain of Schizosaccharomyces japonicus putative tRNAPhe 4-demethylwyosine synthase Tyw1 in complex with FMN
Classification: FLAVOPROTEIN
Source organism: Schizosaccharomyces japonicus (strain yFS275 / FY16936)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2019-07-18
Authors: Sjekloca, L., Ferre D'Amare, A.R.
PDB entry 6puq: 1.56 A crystal structure of flavodoxin-like domain of Schizosaccharomyces japonicus putative tRNAPhe 4-demethylwyosine synthase Tyw1 in complex with FMN
Classification: FLAVOPROTEIN
Source organism: Schizosaccharomyces japonicus (strain yFS275 / FY16936)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2019-07-18
Authors: Sjekloca, L., Ferre-D'Amare, A.R.
PDB entry 6pur: Human TRPM2 bound to ADPR
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2019-07-18
Authors: Du, J., Lu, W., Huang, Y.
PDB entry 6pus: Human TRPM2 bound to ADPR and calcium
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-07-18
Authors: Du, J., Lu, W., Huang, Y.
PDB entry 6put: Structure of HIV cleaved synaptic complex (CSC) intasome bound with calcium
Classification: VIRAL PROTEIN/DNA
Source organism: Human immunodeficiency virus 1; Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-07-18
Authors: Lyumkis, D., Jozwik, I.K., Passos, D.
PDB entry 6puu: Human TRPM2 bound to 8-Br-cADPR and calcium
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-07-18
Authors: Du, J., Lu, W., Huang, Y.
PDB entry 6puv: Crystal Structure of the Carbohydrate Recognition Domain of the Human Macrophage Galactose C-Type Lectin
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2019-07-18
Authors: Birrane, G., Murphy, P.V., Gabba, A., Luz, J.G.
PDB entry 6puw: Structure of HIV cleaved synaptic complex (CSC) intasome bound with magnesium and Bictegravir (BIC)
Classification: VIRAL PROTEIN/DNA
Source organism: Human immunodeficiency virus 1; Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-07-18
Authors: Lyumkis, D., Jozwik, I.K., Passos, D.
PDB entry 6pux: Homoserine transacetylase MetX from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-07-18
Authors: Chaton, C.T., Korotkov, K.V.
PDB entry 6puy: Structure of HIV cleaved synaptic complex (CSC) intasome bound with magnesium and INSTI XZ426 (compound 4d)
Classification: VIRAL PROTEIN/DNA
Source organism: Human immunodeficiency virus 1; Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2019-07-18
Authors: Lyumkis, D., Jozwik, I.K., Passos, D.
PDB entry 6puz: Structure of HIV cleaved synaptic complex (CSC) intasome bound with magnesium and INSTI XZ446 (compound 4f)
Classification: VIRAL PROTEIN/DNA
Source organism: Human immunodeficiency virus 1; Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2019-07-18
Authors: Lyumkis, D., Jozwik, I.K., Passos, D.
PDB entry 6pv0: Backbone-modified variant of zinc finger 2 from the transcription factor Sp1 DNA binding domain: D-Pro in the metal-binding turn
Classification: DNA BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-07-19
Authors: Rao, S.R., Horne, W.S.
PDB entry 6pv1: Backbone-modified variant of zinc finger 2 from the transcription factor Sp1 DNA binding domain: Aib in the metal-binding turn
Classification: DNA BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-07-19
Authors: Rao, S.R., Horne, W.S.
PDB entry 6pv2: Backbone-modified variant of zinc finger 2 from the transcription factor Sp1 DNA binding domain: Orn in the metal-binding turn
Classification: DNA BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-07-19
Authors: Rao, S.R., Horne, W.S.
PDB entry 6pv3: Backbone-modified variant of zinc finger 2 from the transcription factor Sp1 DNA binding domain: altered helix, loop, turn, and sheet
Classification: DNA BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-07-19
Authors: Rao, S.R., Horne, W.S.
PDB entry 6pv4: Structure of CpGH84A
Classification: HYDROLASE
Source organism: Clostridium perfringens ATCC 13124
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-07-19
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 6pv5: Structure of CpGH84B
Classification: HYDROLASE
Source organism: Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2019-07-19
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 6pv6: Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2019-07-19
Authors: Dashti, A., des Georges, A., Frank, J., Ourmazd, A.
PDB entry 6pv7: Human alpha3beta4 nicotinic acetylcholine receptor in complex with nicotine
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli O11; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2019-07-19
Authors: Gharpure, A., Teng, J., Zhuang, Y., Noviello, C.M., Walsh, R.M., Cabuco, R., Howard, R.J., Zaveri, N.T., Lindahl, E., Hibbs, R.E.
PDB entry 6pv8: Human alpha3beta4 nicotinic acetylcholine receptor in complex with AT-1001
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli O11; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2019-07-19
Authors: Gharpure, A., Teng, J., Zhuang, Y., Noviello, C.M., Walsh, R.M., Cabuco, R., Howard, R.J., Zaveri, N.T., Lindahl, E., Hibbs, R.E.
PDB entry 6pv9: Human PD-L1 bound to a macrocyclic peptide which blocks the PD-1/PD-L1 interaction
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-07-19
Authors: Appleby, T.C., Lad, L., Gross, M.L.
PDB entry 6pva: The structure of NTMT1 in complex with compound 11
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2019-07-20
Authors: Noinaj, N., Chen, D., Huang, R.
PDB entry 6pvb: The structure of NTMT1 in complex with compound 6
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-07-20
Authors: Noinaj, N., Chen, D., Huang, R.
PDB entry 6pvc: Structure of human MAIT A-F7 TCR in complex with human MR1-DB28
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2019-07-20
Authors: Awad, W., Rossjohn, J.
PDB entry 6pvd: Structure of human MAIT A-F7 TCR in complex with human MR1-NV18.1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2019-07-20
Authors: Awad, W., Rossjohn, J.
PDB entry 6pve: Structure of Nicotinamide N-Methyltransferase (NNMT) in complex with inhibitor LL319
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-07-20
Authors: Noinaj, N., Huang, R., Chen, D., Yadav, R.
PDB entry 6pvf: Crystal structure of PhqK in complex with malbrancheamide B
Classification: BIOSYNTHETIC PROTEIN
Source organism: Penicillium fellutanum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2019-07-20
Authors: Fraley, A.E., Smith, J.L., Sherman, D.H.
PDB entry 6pvg: Crystal structure of ligand free PhqK
Classification: BIOSYNTHETIC PROTEIN
Source organism: Penicillium fellutanum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.709 Å
Deposited: 2019-07-20
Authors: Fraley, A.E., Smith, J.L., Sherman, D.H.
PDB entry 6pvh: Crystal structure of PhqK in complex with paraherquamide K
Classification: BIOSYNTHETIC PROTEIN
Source organism: Penicillium fellutanum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2019-07-20
Authors: Fraley, A.E., Smith, J.L., Sherman, D.H.
PDB entry 6pvi: Crystal structure of PhqK in complex with paraherquamide L
Classification: BIOSYNTHETIC PROTEIN
Source organism: Penicillium fellutanum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.093 Å
Deposited: 2019-07-20
Authors: Fraley, A.E., Smith, J.L., Sherman, D.H.
PDB entry 6pvj: Crystal structure of PhqK in complex with malbrancheamide C
Classification: BIOSYNTHETIC PROTEIN
Source organism: Penicillium fellutanum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2019-07-20
Authors: Fraley, A.E., Smith, J.L., Sherman, D.H.
PDB entry 6pvk: Bacterial 45SRbgA ribosomal particle class A
Classification: RIBOSOME
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-07-20
Authors: Ortega, J., Seffouh, A., Jain, N., Jahagirdar, D., Basu, K., Razi, A., Ni, X., Guarne, A., Britton, R.A.
PDB entry 6pvl: Cryo-EM structure of mouse TRPV3 in closed state at 42 degrees Celsius
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2019-07-21
Authors: Singh, A.K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6pvm: Cryo-EM structure of mouse TRPV3 in putative sensitized state at 42 degrees Celsius
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2019-07-21
Authors: Singh, A.K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6pvn: Cryo-EM structure of mouse TRPV3-Y564A in putative sensitized state at 4 degrees Celsius
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2019-07-21
Authors: Singh, A.K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6pvo: Cryo-EM structure of mouse TRPV3-Y564A in putative sensitized state at 37 degrees Celsius
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.18 Å
Deposited: 2019-07-21
Authors: Singh, A.K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6pvp: Cryo-EM structure of mouse TRPV3-Y564A in open state at 37 degrees Celsius
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.48 Å
Deposited: 2019-07-21
Authors: Singh, A.K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6pvq: Cryo-EM structure of mouse TRPV3-Y564A in intermediate state at 37 degrees Celsius
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.75 Å
Deposited: 2019-07-21
Authors: Singh, A.K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6pvr: Influenza B M2 Proton Channel in the Closed State - SSNMR Structure at pH 7.5
Classification: VIRAL PROTEIN
Source organism: Influenza B virus (B/Maryland/1/2001)
Experimental method: SOLID-STATE NMR
Deposited: 2019-07-21
Authors: Mandala, V.S., Loftis, A.R., Shcherbakov, A.S., Pentelute, B.L., Hong, M.
PDB entry 6pvs: Structure of Nicotinamide N-Methyltransferase (NNMT) in complex with inhibitor LL320
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.575 Å
Deposited: 2019-07-21
Authors: Noinaj, N., Huang, R., Chen, D., Yadav, R.
PDB entry 6pvt: Influenza B M2 Proton Channel in the Open State - SSNMR Structure at pH 4.5
Classification: VIRAL PROTEIN
Source organism: Influenza B virus (B/Maryland/1/2001)
Experimental method: SOLID-STATE NMR
Deposited: 2019-07-21
Authors: Mandala, V.S., Loftis, A.R., Shcherbakov, A.S., Pentelute, B.L., Hong, M.
PDB entry 6pvu: RNase A in complex with hexametaphosphate
Classification: LYASE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2019-07-21
Authors: Windsor, I.W., Sheppard, S.M., Cummins, C.C., Raines, R.T.
PDB entry 6pvv: RNase A in complex with p5A
Classification: LYASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-07-21
Authors: Windsor, I.W., Sheppard, S.M., Cummins, C.C., Raines, R.T.
PDB entry 6pvw: RNase A in complex with cp4pA
Classification: LYASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-07-21
Authors: Windsor, I.W., Sheppard, S.M., Cummins, C.C., Raines, R.T.
PDB entry 6pvx: RNase A in complex with p5U
Classification: LYASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-07-21
Authors: Windsor, I.W., Sheppard, S.M., Cummins, C.C., Raines, R.T.
PDB entry 6pvy: E.coli DsbA in complex with benzofuran compound 26 ([6-(3-methoxyphenoxy)-1-benzofuran-3-yl]acetic acid)
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2019-07-21
Authors: Wang, G., Heras, B.
PDB entry 6pvz: E.coli DsbA in complex with benzofuran compound 28 ((6-benzyl-1-benzofuran-3-yl)acetic acid)
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2019-07-21
Authors: Wang, G., Heras, B.
PDB entry 6pw0: Cytochrome C oxidase delta 6 mutant
Classification: OXIDOREDUCTASE
Source organism: Rhodobacter sphaeroides 2.4.1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-07-21
Authors: Liu, J., Ferguson-Miller, S.
PDB entry 6pw1: Cytochrome c Oxidase delta 16
Classification: OXIDOREDUCTASE
Source organism: Rhodobacter sphaeroides 2.4.1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-07-21
Authors: Liu, J., Ferguson-Miller, S.
PDB entry 6pw2: Structural Basis for Cooperative Binding of EBNA1 to the Epstein-Barr Virus Dyad Symmetry Minimal Origin of Replication
Classification: viral protein/dna
Source organism: Epstein-Barr virus (strain B95-8); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2019-07-22
Authors: Messick, T.E., Malecka, K.A., Lieberman, P.M.
PDB entry 6pw3: LARP1 DM15 FYRE (F844Y, R847E) mutant bound to m7GpppG dinucleotide (capG)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2019-07-22
Authors: Lahr, R.M., Berman, A.J.
PDB entry 6pw4: Cryo-EM Structure of Thermo-Sensitive TRP Channel TRP1 from the Alga Chlamydomonas reinhardtii in Detergent
Classification: TRANSPORT PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2019-07-22
Authors: McGoldrick, L.L., Singh, A.K., Sobolevsky, A.I.
PDB entry 6pw5: Cryo-EM Structure of Thermo-Sensitive TRP Channel TRP1 from the Alga Chlamydomonas reinhardtii in Nanodiscs
Classification: TRANSPORT PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2019-07-22
Authors: McGoldrick, L.L., Singh, A.K., Sobolevsky, A.I.
PDB entry 6pw6: The HIV-1 Envelope Glycoprotein Clone BG505 SOSIP.664 in Complex with Three Copies of the Bovine Broadly Neutralizing Antibody, NC-Cow1, Fragment Antigen Binding Domain
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2019-07-22
Authors: Berndsen, Z.T., Ward, A.B.
PDB entry 6pw7: X-ray crystal structure of C. elegans STIM EF-SAM domain
Classification: SIGNALING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2019-07-22
Authors: Enomoto, M., Nishikawa, T., Back, S.I., Ishiyama, N., Zheng, L., Stathopulos, P.B., Ikura, M.
PDB entry 6pw8: Hydrocarbon-Stapled Paxillin Peptide Bound to the Focal Adhesion Targeting (FAT) Domain of the Focal Adhesion Kinase (FAK)
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-07-22
Authors: Thifault, D.G., Fromme, P., Martin-Garcia, J.M.
PDB entry 6pw9: Cryo-EM structure of human NatE/HYPK complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.03 Å
Deposited: 2019-07-22
Authors: Deng, S., Marmorstein, R.
PDB entry 6pwa: AAV8 human HEK293-produced, full capsid
Classification: VIRUS
Source organism: Adeno-associated virus - 8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-07-22
Authors: Paulk, N.K., Poweleit, N.
PDB entry 6pwb: Rigid body fitting of flagellin FlaB, and flagellar coiling proteins, FcpA and FcpB, into a 10 Angstrom structure of the asymmetric flagellar filament purified from Leptospira biflexa Patoc WT cells resolved via subtomogram averaging
Classification: STRUCTURAL PROTEIN
Source organism: Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.83 Å
Deposited: 2019-07-22
Authors: Gibson, K.H., Sindelar, C.V., Trajtenberg, F., Buschiazzo, A., San Martin, F., Mechaly, A.
PDB entry 6pwc: A complex structure of arrestin-2 bound to neurotensin receptor 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2019-07-22
Authors: Yin, W., Li, Z., Jin, M., Yin, Y.-L., de Waal, P.W., Pal, K., Gao, X., He, Y., Gao, J., Wang, X., Zhang, Y., Zhou, H., Melcher, K., Jiang, Y., Cong, Y., Zhou, X.E., Yu, X., Xu, H.E.
PDB entry 6pwd: Ewingella americana HopBF1 kinase
Classification: TRANSFERASE
Source organism: Ewingella americana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2019-07-22
Authors: Tomchick, D.R., Tagliabracci, V.S., Park, B.C.
PDB entry 6pwe: Cryo-EM structure of nucleosome core particle
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Drosophila melanogaster; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2019-07-22
Authors: Chittori, S., Subramaniam, S.
PDB entry 6pwf: Cryo-EM structure of the ATPase domain of chromatin remodeling factor ISWI bound to the nucleosome
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Chaetomium thermophilum; Drosophila melanogaster; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2019-07-22
Authors: Chittori, S., Subramaniam, S.
PDB entry 6pwg: Ewingella americana HopBF1 kinase bound to AMP-PNP
Classification: TRANSFERASE
Source organism: Ewingella americana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2019-07-23
Authors: Tomchick, D.R., Tagliabracci, V.S., Park, B.C.
PDB entry 6pwh: Cystal structure of Myotoxin II from Bothrops moojeni co-crystallized with Varespladib (LY315920)
Classification: TOXIN
Source organism: Bothrops moojeni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.749 Å
Deposited: 2019-07-23
Authors: Salvador, G.H.M., Fontes, M.R.M.
PDB entry 6pwi: Structure of CpGH84D
Classification: HYDROLASE
Source organism: Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2019-07-23
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 6pwj: Vibrio cholerae LapD S helix-GGDEF-EAL (apo)
Classification: SIGNALING PROTEIN
Source organism: Vibrio cholerae O1 str. 2010EL-1786
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-07-23
Authors: Giglio, K.M., Cooley, R.B., Sondermann, H.
PDB entry 6pwk: Vibrio cholerae LapD S helix-GGDEF-EAL (bound to c-di-GMP)
Classification: SIGNALING PROTEIN
Source organism: Vibrio cholerae O1 str. 2010EL-1786
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2019-07-23
Authors: Giglio, K.M., Cooley, R.B., Sondermann, H.
PDB entry 6pwl: ADC-7 in complex with boronic acid transition state inhibitor LP06
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2019-07-23
Authors: Curtis, B.C., Powers, R.A., Wallar, B.J.
PDB entry 6pwm: ADC-7 in complex with Beta-lactam antibiotic ceftazidime
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-07-23
Authors: Curtis, B.C., Powers, R.A., Wallar, B.J.
PDB entry 6pwn: MscS Nanodisc with N-terminal His-Tag
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-07-23
Authors: Reddy, B.G., Perozo, E.
PDB entry 6pwo: MscS DDM
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-07-23
Authors: Reddy, B.G., Perozo, E.
PDB entry 6pwp: MscS Nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2019-07-23
Authors: Reddy, B.G., Perozo, E.
PDB entry 6pwq: Crystal structure of Levansucrase from Bacillus subtilis mutant S164A at 2.6 A
Classification: TRANSFERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-07-23
Authors: Diaz-Vilchis, A., Rodriguez-Alegria, M.E., Ortiz-Soto, M.E., Rudino-Pinera, E., Lopez-Munguia, A.
PDB entry 6pwr: Crystal structure of the cow C-type carbohydrate-recognition domain of CD23 in the presence of GlcNAc-beta1-2-Man
Classification: SUGAR BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2019-07-23
Authors: Weis, W.I., Feinberg, H.
PDB entry 6pws: Crystal structure of the cow C-type carbohydrate-recognition domain of CD23 in the presence of alpha-methyl mannoside
Classification: SUGAR BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2019-07-23
Authors: Weis, W.I., Feinberg, H.
PDB entry 6pwt: Crystal structure of the cow C-type carbohydrate-recognition domain of CD23 in the presence of GlcNAc2Man3 oligosaccharide
Classification: SUGAR BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2019-07-23
Authors: Weis, W.I., Feinberg, H.
PDB entry 6pwu: Structure of full-length, fully glycosylated, non-modified HIV-1 gp160 bound to PG16 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2019-07-23
Authors: Pan, J., Chen, B., Harrison, S.C.
PDB entry 6pwv: Cryo-EM structure of MLL1 core complex bound to the nucleosome
Classification: HISTONE BINDING/DNA BINDING/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2019-07-23
Authors: Park, S.H., Ayoub, A., Lee, Y.T., Xu, J., Zhang, W., Zhang, B., Zhang, Y., Cianfrocco, M.A., Su, M., Dou, Y., Cho, U.
PDB entry 6pww: Cryo-EM structure of MLL1 in complex with RbBP5 and WDR5 bound to the nucleosome
Classification: HISTONE BINDING/DNA BINDING/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2019-07-23
Authors: Park, S.H., Ayoub, A., Lee, Y.T., Xu, J., Zhang, W., Zhang, B., Zhang, Y., Cianfrocco, M.A., Su, M., Dou, Y., Cho, U.
PDB entry 6pwx: Cryo-EM structure of RbBP5 bound to the nucleosome
Classification: Histone Binding/DNA Binding/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2019-07-23
Authors: Park, S.H., Ayoub, A., Lee, Y.T., Xu, J., Zhang, W., Zhang, B., Zhang, Y., Cianfrocco, M.A., Su, M., Dou, Y., Cho, U.
PDB entry 6pwy: Structure of C. elegans ZK177.8, SAMHD1 ortholog
Classification: HYDROLASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2019-07-24
Authors: Lim, C.S., Maehigashi, T., Wade, L.R., Bowen, N., Knecht, K., Xiong, Y., Kim, B.
PDB entry 6pwz: Crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidocytidine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-07-24
Authors: Cuthbert, B.J., Goulding, C.W.
PDB entry 6px0: Crystal structure of the TPR domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-07-24
Authors: Yadav, R.P., Artemyev, N.O.
PDB entry 6px1: Set2 bound to nucleosome
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-07-24
Authors: Halic, M., Bilokapic, S.
PDB entry 6px2: Acropora millepora GAPDH
Classification: OXIDOREDUCTASE
Source organism: Acropora millepora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-07-24
Authors: Brandt, G.S., Fields, P.A.
PDB entry 6px3: Set2 bound to nucleosome
Classification: GENE REGULATION
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719); Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2019-07-24
Authors: Halic, M., Bilokapic, S.
PDB entry 6px4: Crystal structure of the complex between periplasmic domains of antiholin RI and holin T from T4 phage, in H32
Classification: VIRAL PROTEIN
Source organism: Escherichia phage ECML-134; Escherichia phage vB_EcoM_NBG2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-07-24
Authors: Krieger, I.V., Sacchettini, J.C.
PDB entry 6px5: CRYSTAL STRUCTURE OF HUMAN MEIZOTHROMBIN DESF1 MUTANT S195A bound with PPACK
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-07-24
Authors: Pelc, L.A., Koester, S.K., Chen, Z., Gistover, N., Di Cera, E.
PDB entry 6px6: HLA-TCR complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-07-24
Authors: Ting, Y.T., Reid, H.H., Rossjohn, J.
PDB entry 6px7: Dg12a in Weaponisation 'on the fly': Convergent recruitment of knottin and defensin scaffolds as neurotoxins in the venom of assassin fly Dolopus genitalis (Diptera: Asilidae)
Classification: TOXIN
Source organism: Dolopus genitalis
Experimental method: SOLUTION NMR
Deposited: 2019-07-25
Authors: Agwa, A.J., Schroeder, C.
PDB entry 6px8: Dg3b in Weaponisation 'on the fly': Convergent recruitment of knottin and defensin scaffolds as neurotoxins in the venom of assassin fly Dolopus genitalis (Diptera: Asilidae)
Classification: TOXIN
Source organism: Dolopus genitalis
Experimental method: SOLUTION NMR
Deposited: 2019-07-25
Authors: Agwa, A.J., Schroeder, C.
PDB entry 6px9: Crystal structure of procaspase-8 in complex with covalent small molecule inhibitor 63-R
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2019-07-25
Authors: Xu, J.H., Wolan, D.W.
PDB entry 6pxa: The crystal structure of chloramphenicol acetyltransferase-like protein from Vibrio fischeri ES114 in complex with taurocholic acid
Classification: TRANSFERASE
Source organism: Aliivibrio fischeri (strain ATCC 700601 / ES114)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2019-07-25
Authors: Tan, K., Maltseva, N., Jedrzejczak, R., Kuhn, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6pxb: N-Terminal SH2 domain of the p120RasGAP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.747 Å
Deposited: 2019-07-25
Authors: Jaber Chehayeb, R., Stiegler, A.L., Boggon, T.J.
PDB entry 6pxc: N-Terminal SH2 domain of the p120RasGAP bound to a p190RhoGAP phosphotyrosine peptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-07-25
Authors: Jaber Chehayeb, R., Stiegler, A.L., Boggon, T.J.
PDB entry 6pxd: CryoEM structure of zebra fish alpha-1 glycine receptor, Apo state
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-07-25
Authors: Du, J., Lu, W., Gouaux, E.
PDB entry 6pxe: Crystal structure of the complex between periplasmic domains of antiholin RI and holin T from T4 phage, in P21
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Escherichia phage vB_EcoM_NBG2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-07-25
Authors: Krieger, I.V., Sacchettini, J.C.
PDB entry 6pxf: Structure of human Cathepsin K with an ectosteric inhibitor at 1.85 Angstrom resolution
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-07-25
Authors: Law, S., Aguda, A.H., Nguyen, N.T., Brayer, G.D., Bromme, D.
PDB entry 6pxg: Crystal Structure of MERS-CoV neutralizing antibody G2 Fab
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-07-26
Authors: Wang, N., McLellan, J.S.
PDB entry 6pxh: Crystal Structure of MERS-CoV S1-NTD bound with G2 Fab
Classification: IMMUNE SYSTEM/Viral protein
Source organism: Middle East respiratory syndrome-related coronavirus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-07-26
Authors: Wang, N., McLellan, J.S.
PDB entry 6pxi: The crystal structure of a singly capped HslUV complex with an axial pore plug and a HslU E257Q mutation
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.447 Å
Deposited: 2019-07-26
Authors: Baytshtok, V., Grant, R.A., Sauer, R.T.
PDB entry 6pxj: Crystal structure of human thrombin mutant I16T
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-07-26
Authors: Stojanovski, B., Chen, Z., Koester, S.K., Pelc, L.A., Di Cera, E.
PDB entry 6pxk: 3.65 Angstroms resolution structure of HslU with an axial-channel plug
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.647 Å
Deposited: 2019-07-26
Authors: Baytshtok, V., Grant, R.A., Sauer, R.T.
PDB entry 6pxl: 3.74 Angstroms resolution structure of HlsU with an axial-channel plug
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.741 Å
Deposited: 2019-07-26
Authors: Baytshtok, V., Grant, R.A., Sauer, R.T.
PDB entry 6pxm: Horse spleen apoferritin light chain
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2019-07-26
Authors: Kopylov, M., Kelley, K., Yen, L.Y., Rice, W.J., Eng, E.T., Carragher, B., Potter, C.S.
PDB entry 6pxn: Human Casein Kinase 1 delta Tau mutant (R178C)
Classification: CIRCADIAN CLOCK PROTEIN/TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.551 Å
Deposited: 2019-07-26
Authors: Philpott, J.M., Tripathi, S.M., Partch, C.L.
PDB entry 6pxo: Human Casein Kinase 1 delta (anion-free crystallization conditions)
Classification: CIRCADIAN CLOCK PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-07-26
Authors: Freeberg, A., Philpott, J.M., Tripathi, S.M., Partch, C.L.
PDB entry 6pxp: Human Casein Kinase 1 delta Site 2 mutant (K171E)
Classification: CIRCADIAN CLOCK PROTEIN/TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-07-26
Authors: Yee, L., Philpott, J.M., Tripathi, S.M., Partch, C.L.
PDB entry 6pxq: Crystal structure of human thrombin mutant D194A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-07-26
Authors: Stojanovski, B., Chen, Z., Koester, S.K., Pelc, L.A., Di Cera, E.
PDB entry 6pxr: Anti-TAU BIIB092 FAB with TAU peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.556 Å
Deposited: 2019-07-26
Authors: Arndt, J.W., Quan, C.
PDB entry 6pxs: Crystal structure of iminodiacetate oxidase (IdaA) from Chelativorans sp. BNC1
Classification: OXIDOREDUCTASE
Source organism: Chelativorans sp. BNC1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.836 Å
Deposited: 2019-07-26
Authors: Jun, S.Y., Lewis, K.M., Xun, L., Kang, C.
PDB entry 6pxu: Crystal structure of human GalNAc-T12 bound to a diglycosylated peptide, Mn2+, and UDP
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.007 Å
Deposited: 2019-07-27
Authors: Samara, N.L., Fernandez, A.J.