LiteFold/PDB huggingface dataset:
PDB entry 8a4e: Room temperature structure of AtPhot2LOV2 in a photostationary equilibrium
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-06-10
Authors: Engilberge, S., Caramello, N., Royant, A.
PDB entry 8a4f: Human Interleukin-4 mutant - C3T-IL4
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-06-11
Authors: Vaz, D.C., Rodrigues, J.R., Mueller, T.D., Sebald, W., Redfield, C., Brito, R.M.M.
PDB entry 8a4g: IPNS H270E variant in complex with Cd and ACV
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-06-11
Authors: Rabe, P., Schofield, C.J.
PDB entry 8a4i: Crystal structure of SALL4 zinc finger cluster 4 with AT-rich DNA
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2022-06-11
Authors: Watson, J.A., Pantier, R., Jayachandran, U., Chhatbar, K., Alexander-Howden, B., Kruusvee, V., Prendecki, M., Bird, A., Cook, A.G.
PDB entry 8a4j: Human GDAP1, A247V mutant
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2022-06-12
Authors: Sutinen, A., Kursula, P.
PDB entry 8a4k: Human GDAP1, R282H mutant
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-06-12
Authors: Sutinen, A., Kursula, P.
PDB entry 8a4l: Lipidic alpha-synuclein fibril - polymorph L2A
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2022-06-12
Authors: Frieg, B., Antonschmidt, L., Dienemann, C., Geraets, J.A., Najbauer, E.E., Matthes, D., de Groot, B.L., Andreas, L.B., Becker, S., Griesinger, C., Schroeder, G.F.
PDB entry 8a4m: Crystal structure of the VIM-2 acquired metallo-beta-Lactamase in complex with compound 8 (JMV-7061)
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2022-06-13
Authors: Tassone, G., Benvenuti, M., Verdirosa, F., Corsica, G., Sannio, F., Docquier, J.D., Pozzi, C., Mangani, S.
PDB entry 8a4n: Structure of Human Aldose Reductase Mutant L300G with a Citrate Molecule Bound in the Anion Binding Pocket
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2022-06-13
Authors: Hubert, L.-S., Heine, A., Klebe, G.
PDB entry 8a4o: Crystal structure of the Ustilago hordei effector protein Uvi2
Classification: SUGAR BINDING PROTEIN
Source organism: Ustilago hordei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-06-13
Authors: Weiland, P., Bange, G., Altegoer, F.
PDB entry 8a4q: crystal structures of diastereomer (R,S,S)-13b (13b-H) in complex with the SARS-CoV-2 Mpro.
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-06-13
Authors: Ibrahim, M., Hilgenfeld, R., Zhang, L.
PDB entry 8a4r: Proline Racemase (ProR) from the Gram-positive bacterium Acetoanaerobium sticklandii from isotropic orthorhombic data at 3.59 A
Classification: ISOMERASE
Source organism: Acetoanaerobium sticklandii DSM 519
Experimental method: X-RAY DIFFRACTION
Resolution: 3.59 Å
Deposited: 2022-06-13
Authors: Najmudin, S., Pan, X.-S., McAuley, K.E., Fisher, L.M., Sanderson, M.R.
PDB entry 8a4t: crystal structures of diastereomer (S,S,S)-13b (13b-K) in complex with the SARS-CoV-2 Mpro
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-06-13
Authors: Ibrahim, M., Hilgenfeld, R., Zhang, L.
PDB entry 8a4u: Crystal structure of human cathepsin L with CAA0225
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-13
Authors: Falke, S., Lieske, J., Guenther, S., Reinke, P.Y.A., Ewert, W., Loboda, J., Karnicar, K., Usenik, A., Lindic, N., Sekirnik, A., Chapman, H.N., Hinrichs, W., Turk, D., Meents, A.
PDB entry 8a4v: Crystal structure of human cathepsin L with covalently bound E-64
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-06-13
Authors: Falke, S., Lieske, J., Guenther, S., Reinke, P.Y.A., Ewert, W., Loboda, J., Karnicar, K., Usenik, A., Lindic, N., Sekirnik, A., Chapman, H.N., Hinrichs, W., Turk, D., Meents, A.
PDB entry 8a4w: Crystal structure of human cathepsin L with covalently bound Cathepsin L inhibitor IV
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-06-13
Authors: Falke, S., Lieske, J., Guenther, S., Reinke, P.Y.A., Ewert, W., Loboda, J., Karnicar, K., Usenik, A., Lindic, N., Sekirnik, A., Chapman, H.N., Hinrichs, W., Turk, D., Meents, A.
PDB entry 8a4x: Crystal structure of human Cathepsin L with covalently bound Calpain inhibitor III
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-13
Authors: Falke, S., Lieske, J., Guenther, S., Reinke, P.Y.A., Ewert, W., Loboda, J., Karnicar, K., Usenik, A., Lindic, N., Sekirnik, A., Chapman, H.N., Hinrichs, W., Turk, D., Meents, A.
PDB entry 8a4y: SARS-CoV-2 non-structural protein-1 (nsp1) in complex with N-(2,3-dihydro-1H-inden-5-yl)acetamide
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.099 Å
Deposited: 2022-06-13
Authors: Borsatto, A., Galdadas, I., Ma, S., Damfo, S., Haider, S., Kozielski, F., Estarellas, C., Gervasio, F.L.
PDB entry 8a50: Crystal structure of HSF2BP-ALPHA1 tetramer
Classification: RECOMBINATION
Experimental method: X-RAY DIFFRACTION
Resolution: 1.484 Å
Deposited: 2022-06-13
Authors: Miron, S., Legrand, P., Ropars, V., Ghouil, R., Zinn-Justin, S.
PDB entry 8a51: Crystal structure of HSF2BP-BRME1 complex
Classification: RECOMBINATION
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-13
Authors: Miron, S., Legrand, P., Ropars, V., Ghouil, R., Zinn-Justin, S.
PDB entry 8a52: Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (asymmetrical variant, trigonal form with long c-axis)
Classification: SIGNALING PROTEIN
Source organism: Bradyrhizobium diazoefficiens USDA 110; Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.461 Å
Deposited: 2022-06-14
Authors: Batra-Safferling, R., Arinkin, V., Granzin, J.
PDB entry 8a53: Crystal structure of AtMCA-IIf C147A (metacaspase 9) from Arabidopsis thaliana
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-06-14
Authors: Sabljic, I., Stael, S., Stahlberg, J., Bozhkov, P.
PDB entry 8a55: Structure of N-terminal SARS-CoV-2 nonstructural protein 1 (nsp1) at atomic resolution
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2022-06-14
Authors: Ma, S., Pinotsis, N., Bowler, M.W., Kozielski, F.
PDB entry 8a56: Coenzyme A-persulfide reductase (CoAPR) from Enterococcus faecalis
Classification: FLAVOPROTEIN
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-06-14
Authors: Costa, S.S., Walsh, B.J., Giedroc, D.P., Brito, J.A.
PDB entry 8a57: Cryo-EM structure of HflXr bound to the Listeria monocytogenes 50S ribosomal subunit.
Classification: RIBOSOME
Source organism: Listeria monocytogenes EGD-e
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-06-14
Authors: Koller, T.O., Crowe-McAuliffe, C., Wilson, D.N.
PDB entry 8a58: X-ray structure of TRIM21 RING E3 ligase in complex with E2 enzyme Ube2W
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-06-14
Authors: James, L.C., Kiss, L.
PDB entry 8a59: C-type lectin-like domain (CTLD) and Sushi-like domain of human CD93
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2022-06-14
Authors: Tassone, G., Barbera, S., Raucci, L., Orlandini, M., Pozzi, C.
PDB entry 8a5a: Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of INO80
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-14
Authors: Kunert, F., Metzner, F.J., Eustermann, S., Jung, J., Woike, S., Schall, K., Kostrewa, D., Hopfner, K.P.
PDB entry 8a5b: Crystal structure of human cathepsin L in complex with covalently bound MG-101
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-14
Authors: Falke, S., Lieske, J., Guenther, S., Reinke, P.Y.A., Ewert, W., Loboda, J., Karnicar, K., Usenik, A., Lindic, N., Sekirnik, A., Chapman, H.N., Hinrichs, W., Turk, D., Meents, A.
PDB entry 8a5c: Crystal structure of Deinococcus radiodurans Endonuclease III-1 Y100L variant
Classification: LYASE
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.951 Å
Deposited: 2022-06-14
Authors: Borges, P.T., Rollo, F., Moe, E.
PDB entry 8a5d: Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of Chaetomium thermophilum INO80
Classification: DNA BINDING PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-06-14
Authors: Kunert, F., Metzner, F.J., Eustermann, S., Jung, J., Woike, S., Schall, K., Kostrewa, D., Hopfner, K.P.
PDB entry 8a5e: Cryo-EM structure of the electron bifurcating Fe-Fe hydrogenase HydABC complex from Acetobacterium woodii in the reduced state
Classification: ELECTRON TRANSPORT
Source organism: Acetobacterium woodii DSM 1030
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-06-14
Authors: Kumar, A., Saura, P., Gamiz-Hernandez, A.P., Kaila, V.R.I., Mueller, V., Schuller, J.M.
PDB entry 8a5f: Crystal structure of Deinococcus radiodurans Endonuclease III-1 R61Q variant
Classification: LYASE
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2022-06-15
Authors: Borges, P.T., Rollo, F., Moe, E.
PDB entry 8a5g: Crystal structure of Deinococcus radiodurans Endonuclease III-3 double mutant
Classification: LYASE
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-06-15
Authors: Borges, P.T., Rollo, F., Moe, E.
PDB entry 8a5i: Cryo-EM structure of Lincomycin bound to the Listeria monocytogenes 50S ribosomal subunit.
Classification: RIBOSOME
Source organism: Listeria monocytogenes EGD-e
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-06-15
Authors: Koller, T.O., Crowe-McAuliffe, C., Wilson, D.N.
PDB entry 8a5j: Crystal structure of Human STE20-like kinase 1, MST1 in complex with compound XMU-MP-1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.123 Å
Deposited: 2022-06-15
Authors: Nawrotek, A., Vuillard, L., Miallau, L.
PDB entry 8a5k: Structural analysis of 1-deoxy-D-xylulose 5-phosphate synthase from Pseudomonas aeruginosa and Klebsiella pneumoniae reveals conformational changes upon cofactor binding
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa LESB58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-15
Authors: Hamid, R., Hirsch, A.
PDB entry 8a5l: TRIM7 PRYSPRY in complex with a 2BC peptide TIEALFQ
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.622 Å
Deposited: 2022-06-15
Authors: Luptak, J.
PDB entry 8a5m: TRIM7 PRYSPRY in complex with a MNV1-NS6 peptide LEALEFQ
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.918 Å
Deposited: 2022-06-15
Authors: Luptak, J.
PDB entry 8a5n: X-ray structure of human H-chain ferritin treated with SDS
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2022-06-15
Authors: Ferraro, G., Merlino, A.
PDB entry 8a5o: Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of S. cerevisiae INO80
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-06-15
Authors: Kunert, F., Metzner, F.J., Eustermann, S., Jung, J., Woike, S., Schall, K., Kostrewa, D., Hopfner, K.P.
PDB entry 8a5p: Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of Chaetomium thermophilum INO80 on curved DNA
Classification: DNA BINDING PROTEIN
Source organism: Thermochaetoides thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-06-15
Authors: Kunert, F., Metzner, F.J., Eustermann, S., Jung, J., Woike, S., Schall, K., Kostrewa, D., Hopfner, K.P.
PDB entry 8a5q: Structure of Arp4-Ies4-N-actin-Arp8-Ino80HSA subcomplex (A-module) of Chaetomium thermophilum INO80 on straight DNA
Classification: DNA BINDING PROTEIN
Source organism: Thermochaetoides thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-15
Authors: Kunert, F., Metzner, F.J., Eustermann, S., Jung, J., Woike, S., Schall, K., Kostrewa, D., Hopfner, K.P.
PDB entry 8a5r: Crystal structure of light-activated DNA-binding protein EL222 from Erythrobacter litoralis crystallized and measured in dark.
Classification: TRANSCRIPTION
Source organism: Erythrobacter litoralis HTCC2594
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-06-15
Authors: Koval, T., Chaudhari, A., Fuertes, G., Andersson, I., Dohnalek, J.
PDB entry 8a5s: Crystal structure of light-activated DNA-binding protein EL222 from Erythrobacter litoralis crystallized in dark, measured illuminated.
Classification: TRANSCRIPTION
Source organism: Erythrobacter litoralis HTCC2594
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-06-15
Authors: Koval, T., Chaudhari, A., Fuertes, G., Andersson, I., Dohnalek, J.
PDB entry 8a5t: Capsid structure of the L-A helper virus from native viral communities
Classification: VIRUS
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2022-06-16
Authors: Schmidt, L., Tueting, C., Stubbs, M.T., Kastritis, P.L.
PDB entry 8a5u: Crystal structure of the beta3 subunit extracellular domain of nicotinic acetylcholine receptor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-06-16
Authors: Giastas, P., Zouridakis, M.
PDB entry 8a5v: Crystal structure of the human phosposerine aminotransferase (PSAT)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2022-06-16
Authors: Costanzi, E., Demitri, N., Ullah, R., Marchesan, F., Peracchi, A., Zangelmi, E., Storici, P., Campanini, B.
PDB entry 8a5w: Crystal structure of the human phosphoserine aminotransferase (PSAT) in complex with O-phosphoserine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2022-06-16
Authors: Costanzi, E., Demitri, N., Ullah, R., Marchesan, F., Peracchi, A., Zangelmi, E., Storici, P., Campanini, B.
PDB entry 8a5x: Crystal structure of phosphatidyl inositol 4-kinase II beta in complex with MM1373
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-06-16
Authors: Klima, M., Boura, E.
PDB entry 8a5y: S. cerevisiae apo unphosphorylated APC/C.
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2022-06-16
Authors: Barford, D., Fernandez-Vazquez, E., Zhang, Z., Yang, J.
PDB entry 8a5z: Imine Reductase from Ensifer adhaerens A208N mutant in complex with NADP+
Classification: OXIDOREDUCTASE
Source organism: Ensifer adhaerens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2022-06-16
Authors: Gilio, A.K., Grogan, G.
PDB entry 8a60: Crystal structure of FhuA in complex with the superinfection exclusion lipoprotein Llp
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Escherichia phage T5
Experimental method: X-RAY DIFFRACTION
Resolution: 3.37 Å
Deposited: 2022-06-16
Authors: van den Berg, B.
PDB entry 8a61: S. cerevisiae apo phosphorylated APC/C
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.4 Å
Deposited: 2022-06-16
Authors: Barford, D., Fernandez-Vazquez, E., Zhang, Z., Yang, J.
PDB entry 8a62: Small molecule stabilizer (compound 2) for FOXO1 and 14-3-3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-16
Authors: Kenanova, D.N., Visser, E.J., Virta, J., Sijbesma, E., Centorrino, F., Zhong, M., Vickery, H., Neitz, J., Brunsveld, L., Ottmann, C., Arkin, M.R.
PDB entry 8a63: Cryo-EM structure of Listeria monocytogenes 50S ribosomal subunit.
Classification: RIBOSOME
Source organism: Listeria monocytogenes EGD-e
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-16
Authors: Koller, T.O., Crowe-McAuliffe, C., Wilson, D.N.
PDB entry 8a64: cryoEM structure of the catalytically inactive EndoS from S. pyogenes in complex with the Fc region of immunoglobulin G1.
Classification: HYDROLASE
Source organism: Homo sapiens; Streptococcus pyogenes
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-06-16
Authors: Trastoy, B., Cifuente, J.O., Du, J.J., Sundberg, E.J., Guerin, M.E.
PDB entry 8a65: Small molecule stabilizer (compound 3) for FOXO1 and 14-3-3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-16
Authors: Kenanova, D.N., Visser, E.J., Virta, J., Sijbesma, E., Centorrino, F., Zhong, M., Vickery, H., Neitz, J., Brunsveld, L., Ottmann, C., Arkin, M.R.
PDB entry 8a66: Crystal structure of MST2 in complex with XMU-MP-1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2022-06-16
Authors: Nawrotek, A., Vuillard, L., Miallau, L., Weber, C.
PDB entry 8a67: Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with matured synthetic nanobody NbSL3.3Q (3rd generation)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2022-06-16
Authors: Lange, S.M., Kulathu, Y.
PDB entry 8a68: Small molecule stabilizer (compound 5) for C-RAF(pS259) and 14-3-3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-16
Authors: Kenanova, D.N., Visser, E.J., Virta, J., Sijbesma, E., Centorrino, F., Zhong, M., Vickery, H., Neitz, J., Brunsveld, L., Ottmann, C., Arkin, M.R.
PDB entry 8a6c: 1 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-17
Authors: Gruhl, T., Weinert, T., Rodrigues, M.J., Milne, C.J., Ortolani, G., Nass, K., Nango, E., Sen, S., Johnson, P.J.M., Cirelli, C., Furrer, A., Mous, S., Skopintsev, P., James, D., Dworkowski, F., Baath, P., Kekilli, D., Oserov, D., Tanaka, R., Glover, H., Bacellar, C., Bruenle, S., Casadei, C.M., Diethelm, A.D., Gashi, D., Gotthard, G., Guixa-Gonzalez, R., Joti, Y., Kabanova, V., Knopp, G., Lesca, E., Ma, P., Martiel, I., Muehle, J., Owada, S., Pamula, F., Sarabi, D., Tejero, O., Tsai, C.J., Varma, N., Wach, A., Boutet, S., Tono, K., Nogly, P., Deupi, X., Iwata, S., Neutze, R., Standfuss, J., Schertler, G.F.X., Panneels, V.
PDB entry 8a6d: 10 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-17
Authors: Gruhl, T., Weinert, T., Rodrigues, M.J., Milne, C.J., Ortolani, G., Nass, K., Nango, E., Sen, S., Johnson, P.J.M., Cirelli, C., Furrer, A., Mous, S., Skopintsev, P., James, D., Dworkowski, F., Baath, P., Kekilli, D., Oserov, D., Tanaka, R., Glover, H., Bacellar, C., Bruenle, S., Casadei, C.M., Diethelm, A.D., Gashi, D., Gotthard, G., Guixa-Gonzalez, R., Joti, Y., Kabanova, V., Knopp, G., Lesca, E., Ma, P., Martiel, I., Muehle, J., Owada, S., Pamula, F., Sarabi, D., Tejero, O., Tsai, C.J., Varma, N., Wach, A., Boutet, S., Tono, K., Nogly, P., Deupi, X., Iwata, S., Neutze, R., Standfuss, J., Schertler, G.F.X., Panneels, V.
PDB entry 8a6e: 100 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SACLA)
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-17
Authors: Gruhl, T., Weinert, T., Rodrigues, M.J., Milne, C.J., Ortolani, G., Nass, K., Nango, E., Sen, S., Johnson, P.J.M., Cirelli, C., Furrer, A., Mous, S., Skopintsev, P., James, D., Dworkowski, F., Baath, P., Kekilli, D., Oserov, D., Tanaka, R., Glover, H., Bacellar, C., Bruenle, S., Casadei, C.M., Diethelm, A.D., Gashi, D., Gotthard, G., Guixa-Gonzalez, R., Joti, Y., Kabanova, V., Knopp, G., Lesca, E., Ma, P., Martiel, I., Muehle, J., Owada, S., Pamula, F., Sarabi, D., Tejero, O., Tsai, C.J., Varma, N., Wach, A., Boutet, S., Tono, K., Nogly, P., Deupi, X., Iwata, S., Neutze, R., Standfuss, J., Schertler, G.F.X., Panneels, V.
PDB entry 8a6f: Small molecule stabilizer (compound 8) for C-RAF and 14-3-3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-17
Authors: Kenanova, D.N., Visser, E.J., Virta, J., Sijbesma, E., Centorrino, F., Zhong, M., Vickery, H., Neitz, J., Brunsveld, L., Ottmann, C., Arkin, M.R.
PDB entry 8a6g: Room temperature rsEGFP2 with a chlorinated chromophore in the non-fluorescent OFF-state
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-06-17
Authors: Fadini, A., van Thor, J.
PDB entry 8a6h: Small molecule stabilizer (compound 7) for C-RAF and 14-3-3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-17
Authors: Kenanova, D.N., Visser, E.J., Virta, J., Sijbesma, E., Centorrino, F., Zhong, M., Vickery, H., Neitz, J., Brunsveld, L., Ottmann, C., Arkin, M.R.
PDB entry 8a6i: Structure of the low complexity domain of TDP-43 (fragment 309-350) with methionine sulfoxide modifications
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-06-17
Authors: Carrasco, J., Anton, R., Pantoja-Uceda, D., Laurents, D.V., Oroz, J.
PDB entry 8a6j: Nudaurelia capensis omega virus maturation intermediate captured at pH6.25 (insect cell expressed VLPs)
Classification: VIRUS LIKE PARTICLE
Source organism: Nudaurelia capensis omega virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2022-06-17
Authors: Castells-Graells, R., Hesketh, E.L., Johnson, J.E., Ranson, N.A., Lawson, D.M., Lomonossoff, G.P.
PDB entry 8a6l: Human 4F2hc-LAT2 heterodimeric amino acid transporter in complex with anticalin D11vs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2022-06-18
Authors: Jeckelmann, J.M., Fotiadis, D.
PDB entry 8a6m: Phosphatidylserine-dependent synaptic vesicle membrane sculpting by synaptogyrin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-06-18
Authors: Yu, T.K., Eastep, G.N., Flores, D., Zweckstetter, M.
PDB entry 8a6n: Room temperature rsEGFP2 with a chlorinated chromophore 300 fs after Photoexcitation
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-06-18
Authors: Fadini, A., van Thor, J.
PDB entry 8a6o: Room temperature rsEGFP2 with a chlorinated chromophore 600 fs after Photoexcitation
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-06-18
Authors: Fadini, A., van Thor, J.
PDB entry 8a6p: Room temperature rsEGFP2 with a chlorinated chromophore 900 fs after photoexcitation
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-06-18
Authors: Fadini, A., van Thor, J.
PDB entry 8a6q: Room temperature rsEGFP2 with a chlorinated chromophore 5 ps after photoexcitation
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-06-18
Authors: Fadini, A., van Thor, J.
PDB entry 8a6r: Room temperature rsEGFP2 with a chlorinated chromophore 100 ps after Photoexcitation
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-06-18
Authors: Fadini, A., van Thor, J.
PDB entry 8a6s: Room temperature rsEGFP2 with a chlorinated chromophore 1 microsecond after Photoexcitation
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-06-19
Authors: Fadini, A., van Thor, J.
PDB entry 8a6t: Cryo-EM structure of the electron bifurcating Fe-Fe hydrogenase HydABC complex from Thermoanaerobacter kivui in the reduced state
Classification: ELECTRON TRANSPORT
Source organism: Thermoanaerobacter kivui
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-19
Authors: Kumar, A., Saura, P., Gamiz-Hernandez, A.P., Kaila, V.R.I., Mueller, V., Schuller, J.M.
PDB entry 8a6u: PcIDS1 in complex with Mg2+
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a6v: PcIDS1 in complex with Mg2+ and IPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a6w: Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with cholestenone
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-06-20
Authors: Snee, M., Amadi, C., Levy, C.
PDB entry 8a6x: Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (asymmetrical variant, trigonal form with long c axis)
Classification: SIGNALING PROTEIN
Source organism: Bradyrhizobium diazoefficiens USDA 110; Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-06-20
Authors: Arinkin, V., Granzin, J., Batra-Safferling, R.
PDB entry 8a6z: PcIDS1 in complex with Mn2+ and IPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a70: PcIDS1 in complex with Mg2+ and GPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a71: Crystal structure of right-handed Z-DNA containing 2'-deoxy-L-ribose in complex with the polyamine cadaverine and potassium cations at ultrahigh resolution
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 0.69 Å
Deposited: 2022-06-20
Authors: Drozdzal, P., Manszewski, T., Gilski, M., Brzezinski, K., Jaskolski, M.
PDB entry 8a73: PcIDS1 in complex with Mn2+ and GPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a74: PcIDS1_F315A in complex with Mg2+ and GPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a76: Metallo-beta-lactamase NDM-1 in complex with 1,2,4-Triazole-3-thione compound 26
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-20
Authors: Vascon, F., Legru, A., Hernandez, J.F., Cendron, L.
PDB entry 8a78: PcIDS1_F315A in complex with Mg2+/Mn2+ and GPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a7a: PcIDS1 in complex with Mg2+ and 3-Br-GPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a7b: PcIDS1_D319N in complex with Mg2+ and 3-Br-GPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a7c: PcIDS1 in complex with Mg2+, IPP, and ZOL
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-20
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a7d: Partial dimer complex of PAPP-A and its inhibitor STC2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2022-06-20
Authors: Kobbero, S.D., Gajhede, M., Mirza, O.A., Boesen, T., Oxvig, C.
PDB entry 8a7e: PAPP-A dimer in complex with its inhibitor STC2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.02 Å
Deposited: 2022-06-20
Authors: Kobbero, S.D., Gajhede, M., Mirza, O.A., Boesen, T., Oxvig, C.
PDB entry 8a7f: Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (asymmetrical variant, trigonal form with long c axis)
Classification: SIGNALING PROTEIN
Source organism: Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110); Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2022-06-21
Authors: Batra-Safferling, R., Arinkin, V., Granzin, J.
PDB entry 8a7h: Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (light state; asymmetrical variant, trigonal form with long c axis)
Classification: SIGNALING PROTEIN
Source organism: Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110); Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 3.145 Å
Deposited: 2022-06-21
Authors: Arinkin, V., Granzin, J., Batra-Safferling, R.
PDB entry 8a7i: Crystal structure of BRD9 bromodomain in complex with compound EA-89
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2022-06-21
Authors: Faller, M., Zink, F.
PDB entry 8a7j: PcIDS1 in complex with Mn2+, IPP, and ZOL
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-06-21
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a7k: PcIDS1 in complex with Mg2+/Mn2+, IPP, and ZOL
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-06-21
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a7l: PcIDS1 in complex with Mg2+, GPP, and ZOL
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-06-21
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a7n: Crystal Structure of human Brachyury G177D variant in complex with (S)-N-(3-aminopropyl)-3-((1-(2-fluorophenyl)-2-oxopyrrolidin-3-yl)amino)-N-methylbenzamide (CF-2-125)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-21
Authors: Newman, J.A., Gavard, A., Aitkenhead, H., Imprachim, N., Sherestha, L., Burgess-Brown, N.A., von Delft, F., Bountra, C., Gileadi, O.
PDB entry 8a7o: beta-2-microglobulin DeltaN6 amyloid fibril form 2PFa
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-06-21
Authors: Wilkinson, M., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8a7p: beta-2-microglobulin DeltaN6 amyloid fibril form 2PFb
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-06-21
Authors: Wilkinson, M., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8a7q: beta-2-microglobulin V27M amyloid fibril form 4PF
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-06-21
Authors: Wilkinson, M., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8a7r: PcIDS1_I420A in complex with Mg2+ and GPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-21
Authors: Ecker, F., Boland, W., Groll, M.
PDB entry 8a7s: Malonyl-CoA reductase from Chloroflexus aurantiacus - C-terminal NADP bound
Classification: OXIDOREDUCTASE
Source organism: Chloroflexus aurantiacus J-10-fl
Experimental method: X-RAY DIFFRACTION
Resolution: 1.542 Å
Deposited: 2022-06-21
Authors: Kabasakal, B.V., Murray, J.W.
PDB entry 8a7t: beta-2-microglobulin D76N amyloid fibril form 2PFa
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-06-21
Authors: Wilkinson, M., Gallardo, R., Radford, S.E., Ranson, N.A.
PDB entry 8a7u: PcIDS1_F315D in complex with Mg2+ and GPP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phaedon cochleariae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-06-21
Authors: Ecker, F., Boland, F., Groll, M.
PDB entry 8a7v: Room temperature rsEGFP2 in its OFF-state obtained with SFX
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2022-06-21
Authors: Fadini, A., van Thor, J.
PDB entry 8a7x: NaK C-DI F92A mutant soaked in Cs+
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-21
Authors: Minniberger, S., Plested, A.J.R.
PDB entry 8a7z: NMR structure of holo-acp
Classification: TRANSFERASE
Source organism: Streptomyces virginiae
Experimental method: SOLUTION NMR
Deposited: 2022-06-21
Authors: Collin, S., Weissman, K.J., Chagot, B., Gruez, A.
PDB entry 8a82: Fe(II)/aKG-dependent halogenase OocPQ
Classification: BIOSYNTHETIC PROTEIN
Source organism: Serratia plymuthica 4Rx13
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-06-21
Authors: Fraley, A.E., Meoded, R.A., Schmalhofer, M., Bergande, C., Groll, M., Piel, J.
PDB entry 8a83: rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2022-06-21
Authors: Fadini, A., van Thor, J., Chang, J.
PDB entry 8a85: Structure of the Reconstructed Ancestor of Phenolic Acid Decarboxylase AncPAD134
Classification: LYASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2022-06-22
Authors: Mokos, D., Schruefer, A., Gruber, K., Daniel, B.
PDB entry 8a8c: T5 phage receptor-binding protein pb5 bound to ferrichrome transporter FhuA
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Escherichia phage T5
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-22
Authors: Silale, A., van den Berg, B.
PDB entry 8a8d: ATP sulfurylase from Methanothermococcus thermolithotrophicus - monoclinic form
Classification: TRANSFERASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-22
Authors: Jespersen, M., Wagner, T.
PDB entry 8a8e: PPSA C terminal octahedral structure
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pyrococcus furiosus DSM 3638
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-06-22
Authors: Song, W.
PDB entry 8a8f: Crystal structure of Glc7 phosphatase in complex with the regulatory region of Ref2
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-06-22
Authors: Carminati, M., Manav, C.M., Bellini, D., Passmore, L.A.
PDB entry 8a8g: ATP sulfurylase from Methanothermococcus thermolithotrophicus - orthorhombic form
Classification: TRANSFERASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-06-23
Authors: Jespersen, M., Wagner, T.
PDB entry 8a8h: APS kinase from Methanothermococcus thermolithotrophicus refined to 1.77 A
Classification: TRANSFERASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2022-06-23
Authors: Jespersen, M., Wagner, T.
PDB entry 8a8i: Xenobiotic reductase A from Pseudomonas putida in complex with ethyl (Z)-2-(hydroxyimino)-3-oxobutanoate
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-06-23
Authors: Polidori, N., Gruber, K.
PDB entry 8a8j: Complex of RecF and DNA from Thermus thermophilus.
Classification: DNA BINDING PROTEIN
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-23
Authors: Nirwal, S., Czarnocki-Cieciura, M., Chaudhary, A., Zajko, W., Skowronek, K., Chamera, S., Figiel, M., Nowotny, M.
PDB entry 8a8k: PAP phosphatase from Methanothermococcus thermolithotrophicus refined to 3.1 A
Classification: HYDROLASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-06-23
Authors: Jespersen, M., Wagner, T.
PDB entry 8a8l: Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme-coordinated fragment
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-06-23
Authors: Snee, M., Katariya, M., Levy, C.
PDB entry 8a8m: Structure of the MAPK p38alpha in complex with its activating MAP2K MKK6
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-06-23
Authors: Bowler, M.W., Juyoux, P., Pellegrini, E.
PDB entry 8a8n: Structure of self-assembling engineered protein nanocage (EPN) fused with hepatitis A pX protein
Classification: STRUCTURAL PROTEIN
Source organism: Human immunodeficiency virus type 1 BH10
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2022-06-23
Authors: Duyvesteyn, H.M.E., Stuart, D.I.
PDB entry 8a8o: PAPS reductase from Methanothermococcus thermolithotrophicus refined to 1.45 A
Classification: OXIDOREDUCTASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-06-23
Authors: Jespersen, M., Wagner, T.
PDB entry 8a8q: Crystal structure of Protein Scalloped in complex with YAP peptide
Classification: TRANSCRIPTION
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.465 Å
Deposited: 2022-06-23
Authors: Scheufler, C., Villard, F.
PDB entry 8a8r: Crystal structure of TEAD4 in complex with YAP peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.696 Å
Deposited: 2022-06-23
Authors: Scheufler, C., Kallen, J.
PDB entry 8a8s: 30S ribosomal protein S24e from Thermococcus kodakarensis
Classification: GENE REGULATION
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.659 Å
Deposited: 2022-06-23
Authors: Calio, A., Hoh, F.
PDB entry 8a8t: Malonyl-CoA reductase from Chloroflexus aurantiacus - C-terminal NADP and malonate bound
Classification: OXIDOREDUCTASE
Source organism: Chloroflexus aurantiacus J-10-fl
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2022-06-24
Authors: Kabasakal, B.V., Murray, J.W.
PDB entry 8a8u: Mycobacterium tuberculosis ClpC1 hexamer structure
Classification: CHAPERONE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2022-06-24
Authors: Felix, J., Fraga, H., Gragera, M., Bueno, T., Weinhaeupl, K.
PDB entry 8a8v: Mycobacterium tuberculosis ClpC1 hexamer structure bound to the natural product antibiotic Cyclomarin
Classification: CHAPERONE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2022-06-24
Authors: Felix, J., Fraga, H., Gragera, M., Bueno, T., Weinhaeupl, K.
PDB entry 8a8w: Mycobacterium tuberculosis ClpC1 hexamer structure bound to the natural product antibiotic Ecumycin (class 1)
Classification: CHAPERONE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.29 Å
Deposited: 2022-06-24
Authors: Felix, J., Fraga, H., Gragera, M., Bueno, T., Weinhaeupl, K.
PDB entry 8a8x: TRIM7 PRYSPRY in complex with a MNV1-NS3 peptide HDDFGLQ
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2022-06-24
Authors: Luptak, J.
PDB entry 8a8y: Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-24
Authors: Adam, S., Hirsch, A.
PDB entry 8a8z: Crystal structure of Danio rerio HDAC6 CD2 in complex with in situ enzymatically hydrolyzed DFMO-based ITF5924
Classification: HYDROLASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-27
Authors: Zrubek, K., Sandrone, G., Cukier, C.D., Stevenazzi, A.
PDB entry 8a90: Crystal structure of FrsH
Classification: OXIDOREDUCTASE
Source organism: Chromobacterium vaccinii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.574 Å
Deposited: 2022-06-27
Authors: Schneberger, N., Wirtz, D.A., Cruesemann, M., Hagelueken, G.
PDB entry 8a91: Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme-coordinated fragment
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-06-27
Authors: Snee, M., Katariya, M., Levy, C.
PDB entry 8a92: p53-Y220C Core Domain in Complex with a Bromo-trifluoro-pyrazole-amine
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2022-06-27
Authors: Stahlecker, J., Braun, M.B., Stehle, T., Boeckler, F.M.
PDB entry 8a93: Complex of RecF-RecR-DNA from Thermus thermophilus.
Classification: DNA BINDING PROTEIN
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2022-06-27
Authors: Nirwal, S., Czarnocki-Cieciura, M., Chaudhary, A., Zajko, W., Skowronek, K., Chamera, S., Figiel, M., Nowotny, M.
PDB entry 8a94: SARS CoV2 Spike in the 2-up state in complex with Fab47.
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-06-27
Authors: Hallberg, B.M., Das, H.
PDB entry 8a95: SARS Cov2 Spike RBD in complex with Fab47
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2022-06-27
Authors: Hallberg, B.M., Das, H.
PDB entry 8a96: SARS Cov2 Spike RBD in complex with Fab47
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-06-27
Authors: Hallberg, B.M., Das, H.
PDB entry 8a97: ROOM TEMPERATURE CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) UNDER XENON PRESSURE (30 bar)
Classification: OXIDOREDUCTASE
Source organism: Paenarthrobacter nitroguajacolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.897 Å
Deposited: 2022-06-27
Authors: Bui, S., Prange, T., Steiner, R.A.
PDB entry 8a98: CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT
Classification: RIBOSOME
Source organism: Leishmania major strain Friedlin
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2022-06-28
Authors: Rajan, K.S., Yonath, A., Bashan, A.
PDB entry 8a99: SARS Cov2 Spike in 1-up conformation complex with Fab47
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-06-28
Authors: Hallberg, B.M., Das, H.
PDB entry 8a9a: Single Particle cryo-EM of the lipid binding protein P116 (MPN213) from Mycoplasma pneumoniae at 3.3 Angstrom resolution.
Classification: LIPID BINDING PROTEIN
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-28
Authors: Sprankel, L., Vizarraga, D.
PDB entry 8a9b: Single Particle cryo-EM of the empty lipid binding protein P116 (MPN213) from Mycoplasma pneumoniae at 4 Angstrom resolution
Classification: LIPID BINDING PROTEIN
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-06-28
Authors: Sprankel, L., Vizarraga, D.
PDB entry 8a9c: Structure of truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Klebsiella pneumoniae in complex with cofactor TPP
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-28
Authors: Adam, S., Hirsch, A.
PDB entry 8a9d: Multicrystal room temperature structure of Lysozyme collected using a double multilayer monochromator.
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-28
Authors: Sandy, J., Cheruvara, H., Mikolajek, H., Sanchez-Weatherby, J.