LiteFold/PDB huggingface dataset:
PDB entry 5ibz: Crystal structure of a novel cyclase (pfam04199).
Classification: LYASE
Source organism: uncultured organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.611 Å
Deposited: 2016-02-22
Authors: Nocek, B., Skarina, T., Brown, G., Joachimiak, A., Savchenko, A., Yakunin, A.
PDB entry 5ic0: Structural analysis of a talin triple domain module
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2016-02-22
Authors: Wu, J., Chang, Y.-C.E., Zhang, H., Brennan, M.L.
PDB entry 5ic1: Structural analysis of a talin triple domain module, E1794Y, E1797Y, Q1801Y mutant
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-02-22
Authors: Wu, J., Chang, Y.-C.E., Zhang, H., Huang, Q.-Q.
PDB entry 5ic3: CAL PDZ domain with peptide and inhibitor
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-02-22
Authors: Zhao, Y., Madden, D.R.
PDB entry 5ic4: Crystal structure of caspase-3 DEVE peptide complex
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2016-02-22
Authors: Seaman, J.E., Julien, O., Lee, P.S., Rettenmaier, T.J., Thomsen, N.D., Wells, J.A.
PDB entry 5ic5: Bacteriophytochrome response regulator RtBRR
Classification: SIGNALING PROTEIN
Source organism: Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-02-22
Authors: Baker, A.W., Satyshur, K.A., Forest, K.T.
PDB entry 5ic6: Crystal structure of caspase-7 DEVE peptide complex
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-02-22
Authors: Seaman, J.E., Julien, O., Lee, P.S., Rettenmaier, T.J., Thomsen, N.D., Wells, J.A.
PDB entry 5ic7: Structure of the WD domain of UTP18
Classification: STRUCTURAL PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.331 Å
Deposited: 2016-02-22
Authors: Zhang, C., Ye, K.
PDB entry 5ic8: Structure of UTP6
Classification: STRUCTURAL PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2016-02-23
Authors: Zhang, C., Ye, K.
PDB entry 5ic9: Structure of the CTD complex of Utp12 and Utp13
Classification: STRUCTURAL PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2016-02-23
Authors: Zhang, C., Ye, K.
PDB entry 5ica: Structure of the CTD complex of UTP12, Utp13, Utp1 and Utp21
Classification: STRUCTURAL PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.507 Å
Deposited: 2016-02-23
Authors: Zhang, C., Ye, K.
PDB entry 5icc: Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine
Classification: TRANSFERASE
Source organism: Thalictrum flavum subsp. glaucum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-02-23
Authors: Robin, A.Y., Graindorge, M., Giustini, C., Dumas, R., Matringe, M.
PDB entry 5icd: REGULATION OF AN ENZYME BY PHOSPHORYLATION AT THE ACTIVE SITE
Classification: OXIDOREDUCTASE (NAD(A)-CHOH(D))
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1990-05-30
Authors: Hurley, J.H., Dean, A.M., Sohl, J.L., Koshlandjunior, D.E., Stroud, R.M.
PDB entry 5ice: Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine and norlaudanosoline
Classification: TRANSFERASE
Source organism: Thalictrum flavum subsp. glaucum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-02-23
Authors: Robin, A.Y., Graindorge, M., Giustini, C., Dumas, R., Matringe, M.
PDB entry 5icf: Crystal structure of (S)-norcoclaurine 6-O-methyltransferase with S-adenosyl-L-homocysteine and sanguinarine
Classification: TRANSFERASE
Source organism: Thalictrum flavum subsp. glaucum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-02-23
Authors: Robin, A.Y., Graindorge, M., Giustini, C., Dumas, R., Matringe, M.
PDB entry 5icg: Crystal structure of apo (S)-norcoclaurine 6-O-methyltransferase
Classification: TRANSFERASE
Source organism: Thalictrum flavum subsp. glaucum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-02-23
Authors: Robin, A.Y., Graindorge, M., Giustini, C., Dumas, R., Matringe, M.
PDB entry 5ich: Crystal structure of Enterococcus faecalis lipoate-protein ligase A (lplA-2) in complex with 8BO-AMP
Classification: LIGASE,TRANSFERASE
Source organism: Enterococcus faecalis (strain ATCC 700802 / V583)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-02-23
Authors: Hughes, S.J., Song, J.H., Antoshchenko, T., Park, H.W.
PDB entry 5icj: Crystal structure of the Mycobacterium tuberculosis transcriptional repressor EthR2 in complex with BDM41420
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-02-23
Authors: Wohlkonig, A., Remaut, H., Tanina, A., Meyer, F., Willand, N., Baulard, A.R., Wintjens, R.
PDB entry 5ick: A unique binding model of FXR LBD with feroline
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2016-02-23
Authors: Lu, Y., Li, Y.
PDB entry 5icl: Crystal structure of Enterococcus faecalis lipoate-protein ligase A (lplA-2) in complex with lipoyl-AMP
Classification: LIGASE,TRANSFERASE
Source organism: Enterococcus faecalis (strain ATCC 700802 / V583)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-02-23
Authors: Hughes, S.J., Antoshchenko, T., Song, J.H., Park, H.W.
PDB entry 5icm: 17beta-hydroxysteroid dehydrogenase type 14 in complex with a non-steroidal inhibitor
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2016-02-23
Authors: Bertoletti, N., Braun, F., Marchais-Oberwinkler, S., Heine, A., Klebe, G.
PDB entry 5icn: HDAC1:MTA1 in complex with inositol-6-phosphate and a novel peptide inhibitor based on histone H4
Classification: TRANSCRIPTION
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2016-02-23
Authors: Millard, C.J., Robertson, N.S., Watson, P.J., Jameson, A.G., Schwabe, J.W.R.
PDB entry 5icp: CDK8-CYCC IN COMPLEX WITH [(S)-2-(4-Chloro-phenyl)-pyrrolidin-1-yl]-(5-methyl-imidazo[5,1-b][1,3,4]thiadiazol-2-yl)-methanone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2016-02-23
Authors: Musil, D., Blagg, J., Mallinger, A., Czodrowski, P., Schiemann, K.
PDB entry 5icq: Methanobactin periplasmic binding protein
Classification: Periplasmic binding protein
Source organism: Methylocystis parvus OBBP
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-02-23
Authors: Dassama, L.M.K., Rosenzweig, A.C.
PDB entry 5icr: 2.25 Angstrom Resolution Crystal Structure of Fatty-Acid-CoA Ligase (FadD32) from Mycobacterium smegmatis in complex with Inhibitor 5'-O-[(11-phenoxyundecanoyl)sulfamoyl]adenosine.
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2016-02-23
Authors: Minasov, G., Shuvalova, L., Hung, D., Fisher, S.L., Edelstein, J., Kiryukhina, O., Dubrovska, I., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5ics: Crystal structure of 17beta-hydroxysteroid dehydrogenase type 14 apoenzyme.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2016-02-23
Authors: Bertoletti, N., Marchais-Oberwinkler, S., Heine, A., Klebe, G.
PDB entry 5ict: Crystal structure of the Drosophila GluR1A ligand binding domain Y792T mutant complex with glutamate
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2016-02-23
Authors: Dharkar, P., Mayer, M.L.
PDB entry 5icu: The crystal structure of CopC from Methylosinus trichosporium OB3b
Classification: CHAPERONE
Source organism: Methylosinus trichosporium OB3b
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2016-02-23
Authors: Lawton, T.J., Hurley, J.D., Rosenzweig, A.C.
PDB entry 5icv: Crystal structure of human NatF (hNaa60) bound to a bisubstrate analogue
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2016-02-23
Authors: Stove, S.I., Magin, R.S., Marmorstein, R., Arnesen, T.
PDB entry 5icw: Crystal structure of human NatF (hNaa60) homodimer bound to Coenzyme A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.951 Å
Deposited: 2016-02-23
Authors: Stove, S.I., Magin, R.S., Marmorstein, R., Arnesen, T.
PDB entry 5icx: Cetuximab Fab in complex with CQFDLSTRRLRCGGSK meditope
Classification: IMMUNE SYSTEM
Source organism: MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-02-23
Authors: Bzymek, K.P., Williams, J.C.
PDB entry 5icy: Cetuximab Fab in complex with linear meditope
Classification: IMMUNE SYSTEM
Source organism: MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-02-23
Authors: Bzymek, K.P., Williams, J.C.
PDB entry 5icz: Cetuximab Fab in complex with GQFDLSTRRLKG peptide
Classification: IMMUNE SYSTEM
Source organism: MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2016-02-23
Authors: Bzymek, K.P., Williams, J.C.
PDB entry 5id0: Cetuximab Fab in complex with aminoheptanoic acid-linked meditope
Classification: IMMUNE SYSTEM
Source organism: MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2016-02-23
Authors: Bzymek, K.P., Williams, J.C.
PDB entry 5id1: Cetuximab Fab in complex with MPT-Cys meditope
Classification: IMMUNE SYSTEM
Source organism: MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2016-02-23
Authors: Bzymek, K.P., Williams, J.C.
PDB entry 5id2: Asymmetry in the active site of Mycobacterium tuberculosis AhpE upon exposure to Mycothiol
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2016-02-23
Authors: Kumar, A., Balakrishna, A.M., Gruber, G.
PDB entry 5id3: Solution structure of the pore-forming region of C. elegans Mitochondrial Calcium Uniporter (MCU)
Classification: TRANSPORT PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: SOLUTION NMR
Deposited: 2016-02-23
Authors: Oxenoid, K., Dong, Y., Cao, C., Cui, T., Sancak, Y., Markhard, A.L., Grabarek, Z., Kong, L., Liu, Z., Ouyang, B., Cong, Y., Mootha, V.K., Chou, J.J., Membrane Protein Structures by Solution NMR (MPSbyNMR)
PDB entry 5id4: Crystal structure of Proteus mirabilis ScsC in an extended conformation
Classification: ISOMERASE
Source organism: Proteus mirabilis ATCC 29906
Experimental method: X-RAY DIFFRACTION
Resolution: 2.921 Å
Deposited: 2016-02-23
Authors: Furlong, E.J., Kurth, F., Choudhury, H.G., Martin, J.L.
PDB entry 5id5: Solution structure of porcine lactoferricin
Classification: HYDROLASE
Experimental method: SOLUTION NMR
Deposited: 2016-02-24
Authors: Chan, M.S., Tse, M.K., Lo, K.C., Sze, K.H.
PDB entry 5id6: Structure of Cpf1/RNA Complex
Classification: HYDROLASE
Source organism: Lachnospiraceae bacterium ND2006; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.382 Å
Deposited: 2016-02-24
Authors: Dong, D., Ren, K., Qiu, X., Wang, J., Huang, Z.
PDB entry 5id7: Crystal structure of human serum albumin in complex with phosphorodithioate derivative of myristoyl cyclic phosphatidic acid (cPA)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2016-02-24
Authors: Sekula, B., Bujacz, A., Rytczak, P., Bujacz, G.
PDB entry 5id8: Crystal structure of CGL1 from Crassostrea gigas, ligand free form (CGL1/FREE)
Classification: SUGAR BINDING PROTEIN
Source organism: Crassostrea gigas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2016-02-24
Authors: Unno, H.
PDB entry 5id9: Crystal structure of equine serum albumin in complex with phosphorodithioate derivative of myristoyl cyclic phosphatidic acid (cPA)
Classification: TRANSPORT PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2016-02-24
Authors: Sekula, B., Bujacz, A., Rytczak, P., Bujacz, G.
PDB entry 5ida: Crystal structure of CGL1 from Crassostrea gigas, mannose-bound form (CGL1/MAN)
Classification: SUGAR BINDING PROTEIN
Source organism: Crassostrea gigas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2016-02-24
Authors: Unno, H.
PDB entry 5idb: Crystal structure of CGL1 from Crassostrea gigas, mannose-bound form (CGL1/MAN2)
Classification: SUGAR BINDING PROTEIN
Source organism: Crassostrea gigas
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2016-02-24
Authors: Unno, H.
PDB entry 5idd: Comment on S. W. M. Tanley and J. R. Helliwell Structural dynamics of cisplatin binding to histidine in a protein Struct. Dyn. 1, 034701 (2014) regarding the refinement of 4mwk, 4mwm, 4mwn and 4oxe and the method we have adopted.
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2016-02-24
Authors: Tanley, S.W.M., Helliwell, J.R.
PDB entry 5ide: Cryo-EM structure of GluA2/3 AMPA receptor heterotetramer (model I)
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.25 Å
Deposited: 2016-02-24
Authors: Herguedas, B., Garcia-Nafria, J., Fernandez-Leiro, R., Greger, I.H.
PDB entry 5idf: Cryo-EM structure of GluA2/3 AMPA receptor heterotetramer (model II)
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 10.31 Å
Deposited: 2016-02-24
Authors: Herguedas, B., Garcia-Nafria, J., Fernandez-Leiro, R., Greger, I.H.
PDB entry 5idh: Crystal structure of Enterococcus faecalis lipoate-protein ligase A (lplA-2) in complex with 8-bromooctanoic acid
Classification: LIGASE,TRANSFERASE
Source organism: Enterococcus faecalis (strain ATCC 700802 / V583)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-02-24
Authors: Hughes, S.J., Song, J.H., Antoshchenko, T., Park, H.W.
PDB entry 5idi: Structure of beta glucosidase 1A from Thermotoga neapolitana, mutant E349A
Classification: HYDROLASE
Source organism: Thermotoga neapolitana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-02-24
Authors: Kulkarni, T., Nordberg Karlsson, E., Logan, D.T.
PDB entry 5idj: Bifunctional histidine kinase CckA (domains DHp-CA) in complex with ADP/Mg2+
Classification: TRANSFERASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2016-02-24
Authors: Dubey, B.N., Schirmer, T.
PDB entry 5idk: Crystal structure of West Nile Virus NS2B-NS3 protease in complex with a capped dipeptide boronate inhibitor
Classification: VIRAL PROTEIN
Source organism: West Nile virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-02-24
Authors: Hilgenfeld, R., Zhang, L.
PDB entry 5idl: Crystal structure of the germline-targeting HIV-1 gp120 engineered outer domain, eOD-GT8
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2016-02-24
Authors: Julien, J.P., Ereno-Orbea, J., Jardine, J.G., Schief, W.R., Wilson, I.A.
PDB entry 5idm: Bifunctional histidine kinase CckA (domain, CA) in complex with c-di-GMP and AMPPNP/Mg2+
Classification: TRANSFERASE
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-02-24
Authors: Dubey, B.N., Schirmer, T.
PDB entry 5idn: CDK8-CYCC IN COMPLEX WITH [(S)-2-(4-Chloro-phenyl)-pyrrolidin-1-yl]-(3-methyl-1H-pyrazolo[3,4-b]pyridin-5-yl)-methanone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2016-02-24
Authors: Musil, D., Blagg, J., Mallinger, A., Czodrowski, P., Schiemann, K.
PDB entry 5ido: RNA Editing TUTase 1 from Trypanosoma brucei in complex with UTP
Classification: TRANSFERASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-02-24
Authors: Thore, S., Rajappa, L.T.
PDB entry 5idp: CDK8-CYCC IN COMPLEX WITH (3-Amino-1H-indazol-5-yl)-[(S)-2-(4-fluoro-phenyl)-piperidin-1-yl]-methanone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2016-02-24
Authors: Musil, D., Blagg, J., Mallinger, A., Czodrowski, P., Schiemann, K.
PDB entry 5idq: Crystal structure of a Short-chain dehydrogenase/reductase (SDR)from Burkholderia vietnamiensis at 1.55 A resolution
Classification: OXIDOREDUCTASE
Source organism: Burkholderia vietnamiensis (strain G4 / LMG 22486)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-02-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5idr: Crystal structure of Proteus Mirabilis ScsC in a transitional conformation
Classification: ISOMERASE
Source organism: Proteus mirabilis ATCC 29906
Experimental method: X-RAY DIFFRACTION
Resolution: 2.562 Å
Deposited: 2016-02-24
Authors: Furlong, E.J., Kurth, F., Choudhury, H.G., Martin, J.L.
PDB entry 5ids: Crystal Structure of a Glucose-1-phosphate Thymidylyltransferase from Burkholderia vietnamiensis
Classification: TRANSFERASE
Source organism: Burkholderia vietnamiensis (strain G4 / LMG 22486)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-02-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5idt: Crystal Structure of a Glucose-1-phosphate Thymidylyltransferase from Burkholderia vietnamiensis with bound Thymidine
Classification: TRANSFERASE
Source organism: Burkholderia vietnamiensis (strain G4 / LMG 22486)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2016-02-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5idu: Crystal structure of an acyl-CoA dehydrogenase domain protein from Burkholderia phymatum bound to FAD
Classification: OXIDOREDUCTASE
Source organism: Burkholderia phymatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-02-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID), Edwards, T.E.
PDB entry 5idv: Structure of the nucleotide binding domain of an ABC transporter MsbA from Acinetobacter baumannii
Classification: TRANSPORT PROTEIN
Source organism: Acinetobacter baumannii AB5075
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-02-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5idw: Crystal structure of an oxidoreductase from Burkholderia vietnamiensis in complex with NADP
Classification: OXIDOREDUCTASE
Source organism: Burkholderia vietnamiensis (strain G4 / LMG 22486)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-02-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5idx: Crystal structure of an oxidoreductase from Burkholderia vietnamiensis
Classification: OXIDOREDUCTASE
Source organism: Burkholderia vietnamiensis (strain G4 / LMG 22486)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-02-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5idy: Crystal structure of an oxidoreductase from Burkholderia vietnamiensis in complex with NADP
Classification: OXIDOREDUCTASE
Source organism: Burkholderia vietnamiensis (strain G4 / LMG 22486)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-02-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5idz: Structure of Human Enolase 2 in complex with (S)-(1-hydroxy-2-oxopiperidin-3-yl)phosphonate
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2016-02-24
Authors: Leonard, P.G., Muller, F.L.
PDB entry 5ie0: Crystal structure of a plant enzyme
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-02-24
Authors: Ran, M.R., Li, M., Chang, W.R.
PDB entry 5ie1: Crystal structure of BACE1 in complex with 3-(2-amino-6-(o-tolyl)quinolin-3-yl)-N-(3,3-dimethylbutyl)propanamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.298 Å
Deposited: 2016-02-24
Authors: Jordan, J.B., Whittington, D.A., Bartberger, M.D., Sickmier, E.A., Chen, K., Cheng, Y., Judd, T.
PDB entry 5ie2: Crystal structure of a plant enzyme
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-02-24
Authors: Fan, M.R., Li, M., Chang, W.R.
PDB entry 5ie3: Crystal structure of a plant enzyme
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-02-24
Authors: Fan, M.R., Li, M., Chang, W.R.
PDB entry 5ie4: Crystal structure of a lactonase mutant in complex with substrate a
Classification: HYDROLASE
Source organism: Clonostachys rosea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-02-25
Authors: Zheng, Y.Y., Xu, Z.X., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 5ie5: Crystal structure of a lactonase double mutant in complex with substrate a
Classification: HYDROLASE
Source organism: Clonostachys rosea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2016-02-25
Authors: Zheng, Y.Y., Xu, Z.X., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 5ie6: Crystal structure of a lactonase mutant in complex with substrate b
Classification: HYDROLASE
Source organism: Clonostachys rosea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2016-02-25
Authors: Zheng, Y.Y., Xu, Z.X., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 5ie7: Crystal structure of a lactonase double mutant in complex with substrate b
Classification: HYDROLASE
Source organism: Clonostachys rosea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-02-25
Authors: Zheng, Y.Y., Xu, Z.X., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 5ie8: The pyrazinoic acid binding domain of Ribosomal Protein S1 from Mycobacterium tuberculosis
Classification: TRANSLATION
Source organism: Mycobacterium leprae (strain TN)
Experimental method: SOLUTION NMR
Deposited: 2016-02-25
Authors: Huang, B., Liao, X.
PDB entry 5ie9: Crystal structure of the Bacillus-conserved MazG protein, a nucleotide pyrophosphohydrolase
Classification: HYDROLASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-02-25
Authors: Kim, M., Hong, M.
PDB entry 5iea: TRIM5 B-box2 and coiled-coil chimera
Classification: LIGASE
Source organism: Macaca mulatta; Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.258 Å
Deposited: 2016-02-25
Authors: Wagner, J.M., Doss, G., Pornillos, O.
PDB entry 5ieb: Solution structure of SdrG from Sphingomonas melonis Fr1
Classification: PROTEIN
Source organism: Sphingomonas melonis FR1
Experimental method: SOLUTION NMR
Deposited: 2016-02-25
Authors: Campagne, S., Vorholt, J.A., Allain, F.H.-T.
PDB entry 5iec: Structural basis for therapeutic inhibition of complement C5
Classification: BLOOD CLOTTING
Source organism: Rhipicephalus appendiculatus
Experimental method: SOLUTION NMR
Deposited: 2016-02-25
Authors: Sheppard, D., Lea, S.M.
PDB entry 5ied: Murine endoplasmic reticulum alpha-glucosidase II with castanospermine
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2016-02-25
Authors: Caputo, A.T., Roversi, P., Alonzi, D.S., Kiappes, J.L., Zitzmann, N.
PDB entry 5iee: Murine endoplasmic reticulum alpha-glucosidase II with 1-deoxynojirimycin
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2016-02-25
Authors: Caputo, A.T., Roversi, P., Alonzi, D.S., Kiappes, J.L., Zitzmann, N.
PDB entry 5ief: Murine endoplasmic reticulum alpha-glucosidase II with N-butyl-1-deoxynojirimycin
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2016-02-25
Authors: Caputo, A.T., Roversi, P., Alonzi, D.S., Kiappes, J.L., Zitzmann, N.
PDB entry 5ieg: Murine endoplasmic reticulum alpha-glucosidase II with N-9'-methoxynonyl-1-deoxynojirimycin.
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.822 Å
Deposited: 2016-02-25
Authors: Caputo, A.T., Roversi, P., Alonzi, D.S., Kiappes, J.L., Zitzmann, N.
PDB entry 5ieh: Structure of HLA-B*40:02 in complex with the phosphorylated endogenous peptide REF(p)SKEPEL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-02-25
Authors: Alpizar, A., Marcilla, M., Santiago, C.
PDB entry 5iei: X-ray crystallographic structure of a high affinity IGF2 antagonist (Domain11 AB5 RHH) based on human IGF2R domain 11
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-02-25
Authors: Nicholls, R.D., Williams, C., Strickland, M., Frago, S., Hassan, A.B., Crump, M.P.
PDB entry 5iej: Solution structure of the BeF3-activated conformation of SdrG from Pseudomonas melonis Fr1
Classification: PROTEIN
Source organism: Sphingomonas melonis Fr1
Experimental method: SOLUTION NMR
Deposited: 2016-02-25
Authors: Campagne, S., Vorholt, J.A., Allain, F.H.-T.
PDB entry 5iek: Structure of HLA-B*40:02 in complex with the endogenous peptide REFSKEPEL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-02-25
Authors: Alpizar, A., Marcilla, M., Santiago, C.
PDB entry 5iel: Structure of Lysozyme labeled with fluorescein isothiocyanate (FITC) at 1.15 Angstroms resolution
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2016-02-25
Authors: Kachalova, G.S., Vlaskina, A.V., Popov, A.P., Simanovskaia, A.A., Krukova, M.V., Lipkin, A.V.
PDB entry 5iem: NMR structure of the 5'-terminal hairpin of the 7SK snRNA
Classification: TRANSCRIPTION
Experimental method: SOLUTION NMR
Deposited: 2016-02-25
Authors: Bourbigot, S., Dock-Bregeon, A.C., Coutant, J., Kieffer, B., Lebars, I.
PDB entry 5ien: Structure of CDL2.2, a computationally designed Vitamin-D3 binder
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.089 Å
Deposited: 2016-02-25
Authors: Stoddard, B.L., Doyle, L.A.
PDB entry 5ieo: Structure of CDL2.3a, a computationally designed Vitamin-D3 binder
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.851 Å
Deposited: 2016-02-25
Authors: Stoddard, B.L., Doyle, L.A.
PDB entry 5iep: Structure of CDL2.3b, a computationally designed Vitamin-D3 binder
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.893 Å
Deposited: 2016-02-25
Authors: Stoddard, B.L., Doyle, L.A.
PDB entry 5ieq: Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to fragment hit EBSI-747 1-(4-chlorophenyl)-1H-imidazole
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Wilson-Smith/1933 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ier: Structure of a computationally designed 17-OHP binder
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.005 Å
Deposited: 2016-02-25
Authors: Stoddard, B.L., Doyle, L.A.
PDB entry 5ies: Crystal structure of VRC01c-HuGL2 Fab from an HIV-1 naive donor in complex with with a germline-targeting gp120 engineered outer domain eOD-GT8 at 2.16 A
Classification: IMMUNE SYSTEM/ VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2016-02-25
Authors: Sarkar, A., Wilson, I.A.
PDB entry 5iet: Crystal Structure of Mycobacterium Tuberculosis ATP-independent Proteasome activator
Classification: GENE REGULATION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2016-02-25
Authors: Bai, L., Hu, K., Wang, T., Jastrab, J.B., Darwin, K.H., Li, H.
PDB entry 5ieu: Crystal Structure of Mycobacterium Tuberculosis ATP-independent Proteasome Activator Tetramer
Classification: GENE REGULATION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-02-25
Authors: Bai, L., Hu, K., Wang, T., Jastrab, J.B., Darwin, K.H., Li, H.
PDB entry 5iev: Crystal structure of BAY 1000394 (Roniciclib) bound to CDK2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2016-02-25
Authors: Ayaz, P., Andres, D., Kwiatkowski, D.A., Kolbe, C., Lienau, P., Siemeister, G., Luecking, U., Stegmann, C.M.
PDB entry 5iew: NMR Structures Show Unwinding of the GCN4p Coiled Coil Superhelix Accompanying Disruption of Ion Pairs at Acidic pH
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR
Deposited: 2016-02-25
Authors: Brady, M.R., Kaplan, A.R., Alexandrescu, A.T.
PDB entry 5iex: Crystal structure of (R,S)-S-{4-[(5-Bromo-4-{[(2R,3R)-2-hydroxy-1-methylpropyl]oxy}- pyrimidin-2-yl)amino]phenyl}-S-cyclopropylsulfoximide bound to CDK2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2016-02-25
Authors: Ayaz, P., Andres, D., Kwiatkowski, D.A., Kolbe, C., Lienau, P., Siemeister, G., Luecking, U., Stegmann, C.M.
PDB entry 5iey: Crystal structure of a CDK inhibitor bound to CDK2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2016-02-25
Authors: Ayaz, P., Andres, D., Kwiatkowski, D.A., Kolbe, C., Lienau, P., Siemeister, G., Luecking, U., Stegmann, C.M.
PDB entry 5iez: Discovery of Potent Myeloid Cell Leukemia-1 (Mcl-1) inhibitors using Structure-Based Design
Classification: apoptosis/apoptosis inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-02-25
Authors: Zhao, B.
PDB entry 5if0: Crystal structure of VRC01c-HuGL2 Fab from an HIV-1 naive donor in complex with with a germline-targeting gp120 engineered outer domain eOD-GT8 at 2.44 A
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2016-02-25
Authors: Sarkar, A., Wilson, I.A.
PDB entry 5if1: Crystal structure apo CDK2/cyclin A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2016-02-25
Authors: Ayaz, P., Andres, D., Kwiatkowski, D.A., Kolbe, C., Lienau, P., Siemeister, G., Luecking, U., Stegmann, C.M.
PDB entry 5if2: Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to fragment hit EBSI-576 (5,6-dichloro-1H-1,3-benzodiazol-2-yl)methanol
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Wilson-Smith/1933 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5if3: Crystal structure of a Short-chain dehydrogenase/reductase SDR from Burkholderia vietnamiensis
Classification: OXIDOREDUCTASE
Source organism: Burkholderia vietnamiensis (strain G4 / LMG 22486)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5if4: Discovery of Potent Myeloid Cell Leukemia-1 (Mcl-1) inhibitors using Structure-Based Design
Classification: apoptosis/apoptosis inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.392 Å
Deposited: 2016-02-25
Authors: Zhao, B.
PDB entry 5if5: Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to EBSI-39 (2,3-dichlorophenyl)methanol
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Wilson-Smith/1933 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5if6: Structure of a computationally designed 17-OHP binder
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2016-02-25
Authors: Stoddard, B.L., Doyle, L.A.
PDB entry 5if7: Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to fragment hit EBSI-279 N-[(4-chlorophenyl)methyl]-1-methyl-1H-pyrazolo[3,4-d]pyrimidin-4-amine
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Wilson-Smith/1933 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5if8: Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to fragment hit EBSI-2643 5-[(4-chlorophenyl)methyl]-1,3,4-oxadiazol-2-amine
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Wilson-Smith/1933 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5if9: Crystal Structure of Cobyrinic Acid a,c-diamide synthase from Mycobacterium smegmatis with bound ATP analog and Magnesium
Classification: LIGASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ifa: Crystal structure of unbound VRC01c-HuGL2 Fab from an HIV-1 naive donor at 1.82 A
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.821 Å
Deposited: 2016-02-25
Authors: Sarkar, A., Wilson, I.A.
PDB entry 5ifb: Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to follow on fragment EBSI-4719 5-chloro-2-(1H-imidazol-1-yl)aniline
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Wilson-Smith/1933 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ifc: Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to follow on fragment EBSI-4720 1-(4-bromophenyl)-1H-imidazole
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Wilson-Smith/1933 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ifd: Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to follow on fragment EBSI-4721 1-(4-fluorophenyl)-1H-imidazole
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Wilson-Smith/1933 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2016-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ife: Crystal structure of the human SF3b core complex
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2016-02-25
Authors: Cretu, C., Dybkov, O., De Laurentiis, E., Will, C.L., Luhrmann, R., Pena, V.
PDB entry 5iff: Crystal structure of R.PabI-nonspecific DNA complex
Classification: HYDROLASE/DNA
Source organism: Pyrococcus abyssi; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-02-26
Authors: Wang, D., Miyazono, K., Tanokura, M.
PDB entry 5ifg: Crystal structure of HigA-HigB complex from E. Coli
Classification: HYDROLASE/ANTITOXIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.702 Å
Deposited: 2016-02-26
Authors: Yang, J.S., Zhou, K., Gao, z.Q., Liu, Q.S., Dong, Y.H.
PDB entry 5ifh: Crystal structure of the BCR Fab fragment from subset #2 case P11475
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.293 Å
Deposited: 2016-02-26
Authors: Minici, C., Degano, M.
PDB entry 5ifi: CRYSTAL STRUCTURE OF ACETYL-COA SYNTHETASE IN COMPLEX WITH ADENOSINE-5'-PROPYLPHOSPHATE FROM CRYPTOCOCCUS NEOFORMANS H99
Classification: LIGASE
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-02-26
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID), SSGCID, Fox III, D., Edwards, T.E., Lorimer, D.D., Mutz, M.W.
PDB entry 5ifj: Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPEQPFP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2016-02-26
Authors: Snir, O., Chen, X., Gidoni, M., du Pre, M.F., Zhao, Y., Steinsbo, O., Lundin, K.E., Yaari, G., Sollid, L.M.
PDB entry 5ifk: Purine nucleoside phosphorylase
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.967 Å
Deposited: 2016-02-26
Authors: Thakur, K.G., Priyanka, A.
PDB entry 5ifl: Crystal structure of B. pseudomallei FabI in complex with NAD and triclosan
Classification: OXIDOREDUCTASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-02-26
Authors: Hirschbeck, M.W., Eltschkner, S., Tonge, P.J., Kisker, C.
PDB entry 5ifm: Human NONO (p54nrb) Homodimer
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-02-26
Authors: Knott, G.J., Bond, C.S.
PDB entry 5ifn: Human PSPC1 Homodimer
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.17 Å
Deposited: 2016-02-26
Authors: Knott, G.J., Passon, D.M., Bond, C.S.
PDB entry 5ifo: X-ray structure of HSA-Myr-KP1019
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2016-02-26
Authors: Bijelic, A., Theiner, S., Keppler, B.K., Rompel, A.
PDB entry 5ifp: STRUCTURE OF BETA-GALACTOSIDASE FROM ASPERGILLUS NIGER
Classification: HYDROLASE
Source organism: Aspergillus niger CBS 513.88
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2016-02-26
Authors: Rico-Diaz, A., Ramirez-Escudero, M., Vizoso Vazquez, A., Cerdan, M.E., Becerra, M., Sanz-Aparicio, J.
PDB entry 5ifr: Structure of the stable UBE2D3-UbDha conjugate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-02-26
Authors: Pruneda, J.N., Mulder, M.P.C., Witting, K., Ovaa, H., Komander, D.
PDB entry 5ifs: Quantitative interaction mapping reveals an extended ubiquitin regulatory domain in ASPL that disrupts functional p97 hexamers and induces cell death
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2016-02-26
Authors: Roske, Y., Arumughan, A., Heinemann, U., Wanker, E.
PDB entry 5ift: STRUCTURE OF E298Q-BETA-GALACTOSIDASE FROM ASPERGILLUS NIGER IN COMPLEX WITH 3-b-Galactopyranosyl glucose
Classification: HYDROLASE
Source organism: Aspergillus niger CBS 513.88
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2016-02-26
Authors: Rico-Diaz, A., Ramirez-Escudero, M., Vizoso Vazquez, A., Cerdan, M.E., Becerra, M., Sanz-Aparicio, J.
PDB entry 5ifu: Crystal Structure of Prolyl-tRNA synthetase (ProRS, Proline--tRNA ligase) from Plasmodium falciparum in complex with Glyburide
Classification: LIGASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2016-02-26
Authors: Dranow, D.M., Hewitt, S.N., Abendroth, J., Structural Genomics Consortium (SGC)
PDB entry 5ifw: Quantitative interaction mapping reveals an extended ubiquitin regulatory domain in ASPL that disrupts functional p97 hexamers and induces cell death
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2016-02-26
Authors: Roske, Y., Heinemann, U.
PDB entry 5ify: Crystal structure of Glucose-1-phosphate thymidylyltransferase from Burkholderia vietnamiensis in complex with 2 -Deoxyuridine-5'-monophosphate and 2'-Deoxy-Thymidine-B-L-Rhamnose
Classification: TRANSFERASE
Source organism: Burkholderia vietnamiensis (strain G4 / LMG 22486)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2016-02-26
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ifz: Crystal Structure of Ribose-5-phosphate Isomerase from Brucella melitensis 16M
Classification: ISOMERASE
Source organism: Brucella melitensis bv. 1 str. 16M
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-02-26
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ig0: Crystal structure of S. rosetta CaMKII hub
Classification: TRANSFERASE
Source organism: Salpingoeca rosetta (strain ATCC 50818 / BSB-021)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2016-02-26
Authors: Bhattacharyya, M., Gee, C.L., Barros, T., Kuriyan, J.
PDB entry 5ig1: Crystal structure of S. rosetta CaMKII kinase domain
Classification: TRANSFERASE
Source organism: Salpingoeca rosetta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2016-02-26
Authors: Bhattacharyya, M., Gee, C.L., Barros, T., Kuriyan, J.
PDB entry 5ig2: Crystal structure of a short chain dehydrogenase/reductase SDR from Burkholderia phymatum in complex with NAD
Classification: OXIDOREDUCTASE
Source organism: Burkholderia phymatum (strain DSM 17167 / STM815)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-02-26
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ig3: Crystal structure of the human CaMKII-alpha hub
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2016-02-26
Authors: McSpadden, E., Cao, Y.M., Bhattacharyya, M., Gee, C.L., Barros, T., Kuriyan, J.
PDB entry 5ig4: Crystal structure of N. vectensis CaMKII-A hub
Classification: TRANSFERASE
Source organism: Nematostella vectensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2016-02-26
Authors: Bhattacharyya, M., Pappireddi, N., Gee, C.L., Barros, T., Kuriyan, J.
PDB entry 5ig5: Crystal structure of N. vectensis CaMKII-B hub at pH 4.2
Classification: TRANSFERASE
Source organism: Nematostella vectensis
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-02-26
Authors: Bhattacharyya, M., Gee, C.L., Barros, T., Kuriyan, J.
PDB entry 5ig6: Ultra-high resolution crystal structure of second bromodomain of BRD2 in complex with inhibitor 6B3
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.91 Å
Deposited: 2016-02-27
Authors: Tripathi, S.K., Padmanabhan, B.
PDB entry 5ig7: Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPQQPFP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2016-02-27
Authors: Snir, O., Chen, X., Gidoni, M., du Pre, M.F., Zhao, Y., Steinsbo, O., Lundin, K.E., Yaari, G., Sollid, L.M.
PDB entry 5ig8: Crystal structure of macrocyclase MdnB from Microcystis aeruginosa MRC
Classification: LIGASE
Source organism: Microcystis aeruginosa MRC
Experimental method: X-RAY DIFFRACTION
Resolution: 2.278 Å
Deposited: 2016-02-27
Authors: Li, K., Condurso, H.L., Bruner, S.D.
PDB entry 5ig9: Crystal structure of macrocyclase MdnC bound with precursor peptide MdnA from Microcystis aeruginosa MRC
Classification: LIGASE
Source organism: Microcystis aeruginosa MRC; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.665 Å
Deposited: 2016-02-27
Authors: Li, K., Condurso, H.L., Bruner, S.D.
PDB entry 5iga: Crystal structure of a marine metagenome TRAP solute binding protein specific for aromatic acid ligands (Sorcerer II Global Ocean Sampling Expedition, unidentified microbe, locus tag GOS_1523157, Triple Surface Mutant K158A_K223A_K313A) in complex with co-purified parahydroxybenzoate
Classification: TRANSPORT PROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-02-27
Authors: Vetting, M.W., Al Obaidi, N.F., Hogle, S.L., Dupont, C.L., Almo, S.C.
PDB entry 5igb: Crystal structure of Staphylococcal nuclease variant Delta+PHS L36D/V66H at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-02-27
Authors: Robinson, A.C., Theodoru, A., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 5igc: Crystal structure of Staphylococcal nuclease variant Delta+PHS V23E/V66H at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-02-27
Authors: Robinson, A.C., Theodoru, A., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 5igd: Crystal structure of Staphylococcal nuclease variant Delta+PHS T62H/I92E at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-02-27
Authors: Robinson, A.C., Theodoru, A., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 5ige: Crystal structure of Staphylococcal nuclease variant Delta+PHS T62H/V99D at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-02-27
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.