LiteFold/PDB huggingface dataset:
PDB entry 3g9z: Crystal structure of EstE5, was soaked by p-nitrophenyl caprylate
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-02-16
Authors: Hwang, K.Y., Nam, K.H.
PDB entry 3ga0: CtBP1/BARS Gly172->Glu mutant structure: impairing NAD(H) binding and dimerization
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2009-02-16
Authors: Nardini, M., Valente, C., Ricagno, S., Luini, A., Corda, D., Bolognesi, M.
PDB entry 3ga1: Crystal Structure of the Human Nac1 POZ Domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-02-16
Authors: Stead, M.A., Carr, S.B., Wright, S.C.
PDB entry 3ga2: Crystal structure of the Endonuclease_V (BSU36170) from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR624
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-02-16
Authors: Forouhar, F., Abashidze, M., Hussain, M., Seetharaman, J., Janjua, H., Fang, Y., Xiao, R., Cunningham, K., Ma, L.-C., Owens, L., Wang, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3ga3: Crystal structure of the C-terminal domain of human MDA5
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2009-02-16
Authors: Li, P.
PDB entry 3ga4: Crystal structure of Ost6L (photoreduced form)
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-02-16
Authors: Stirnimann, C.U., Grimshaw, J.P.A., Schulz, B.L., Brozzo, M.S., Fritsch, F., Glockshuber, R., Capitani, G., Gruetter, M.G., Aebi, M.
PDB entry 3ga5: X-ray structure of glucose/galactose receptor from Salmonella typhimurium in complex with (2R)-glyceryl-beta-D-galactopyranoside
Classification: SUGAR BINDING PROTEIN
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2009-02-16
Authors: Sooriyaarachchi, S., Ubhayasekera, W., Mowbray, S.L.
PDB entry 3ga6: Mth0212 in complex with two DNA helices
Classification: HYDROLASE/DNA
Source organism: Methanothermobacter thermautotrophicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.898 Å
Deposited: 2009-02-16
Authors: Lakomek, K., Dickmanns, A., Ficner, R.
PDB entry 3ga7: 1.55 Angstrom Crystal Structure of an Acetyl Esterase from Salmonella typhimurium
Classification: HYDROLASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-02-16
Authors: Minasov, G., Wawrzak, Z., Brunzelle, J., Onopriyenko, O., Skarina, T., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3ga8: Structure of the N-terminal domain of the E. coli protein MqsA (YgiT/b3021)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-02-16
Authors: Brown, B.L., Arruda, J.M., Peti, W., Page, R.
PDB entry 3ga9: Crystal structure of Bacillus anthracis transpeptidase enzyme CapD, crystal form II
Classification: HYDROLASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-02-16
Authors: Zhang, R., Wu, R., Richter, S., Anderson, V.J., Missiakas, D., Joachimiak, A.
PDB entry 3gaa: The crystal structure of the protein with unknown function from Thermoplasma acidophilum
Classification: structural genomics, unknown function
Source organism: Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-02-16
Authors: Zhang, R., Borovilos, M., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3gab: C-terminal domain of Bacillus subtilis MutL crystal form I
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-02-17
Authors: Guarne, A., Pillon, M.C., Lorenowicz, J.J., Mitchell, R.R., Chung, Y.S., Friedhoff, P.
PDB entry 3gac: Structure of mif with HPP
Classification: CYTOKINE
Source organism: Plasmodium yoelii yoelii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-02-17
Authors: Zhou, Y.-F., Su, X.-D., Shao, D., Wang, H.
PDB entry 3gad: Structure of apomif
Classification: CYTOKINE
Source organism: Plasmodium yoelii yoelii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-17
Authors: Zhou, Y.-F., Su, X.-D., Shao, D., Wang, H.
PDB entry 3gae: Crystal Structure of PUL
Classification: NUCLEAR PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-02-17
Authors: Zhao, G., Schindelin, H., Lennarz, W.J.
PDB entry 3gaf: 2.2A Crystal Structure of 7-Alpha-Hydroxysteroid Dehydrogenase from Brucella Melitensis
Classification: OXIDOREDUCTASE
Source organism: Brucella melitensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-02-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3gag: Crystal structure of a nitroreductase-like protein (smu.346) from streptococcus mutans at 1.70 A resolution
Classification: OXIDOREDUCTASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-02-17
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gah: Structure of a F112H variant PduO-type ATP:corrinoid adenosyltransferase from Lactobacillus reuteri complexed with cobalamin and ATP
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2009-02-17
Authors: St Maurice, M., Mera, P.E., Escalante-Semerena, J.C., Rayment, I.
PDB entry 3gai: Structure of a F112A variant PduO-type ATP:corrinoid adenosyltransferase from Lactobacillus reuteri complexed with cobalamin and ATP
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2009-02-17
Authors: St Maurice, M., Mera, P.E., Escalante-Semerena, J.C., Rayment, I.
PDB entry 3gaj: Structure of a C-terminal deletion variant of a PduO-type ATP:corrinoid adenosyltransferase from Lactobacillus reuteri complexed with cobalamin and ATP
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2009-02-17
Authors: St Maurice, M., Mera, P.E., Escalante-Semerena, J.C., Rayment, I.
PDB entry 3gak: Structure of Giardia fructose-1,6-biphosphate aldolase
Classification: LYASE
Source organism: Giardia intestinalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-02-17
Authors: Galkin, A., Herzberg, O.
PDB entry 3gal: CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSAMINE
Classification: LECTIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1998-07-13
Authors: Leonidas, D.D., Acharya, K.R.
PDB entry 3gam: Synthesis of Casimiroin and Optimization of Its Quinone Reductase 2 and Aromatase Inhibitory activity
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2009-02-17
Authors: Sturdy, M., Pegan, S.D., Maiti, A., Marler, L., Mesecar, A.D., Pezzuto, J.M., Cushman, M.
PDB entry 3gan: Crystal structure of gene product from Arabidopsis thaliana At3g22680 with bound suramin
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-17
Authors: Burgie, E.S., Bingman, C.A., Wesenberg, G.E., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 3gao: Crystal structure of the guanine riboswitch bound to xanthine.
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-02-18
Authors: Gilbert, S.D., Batey, R.T.
PDB entry 3gaq: Female-specific Histamine-Binding Protein, D24R Mutant
Classification: IMMUNE SYSTEM
Source organism: Rhipicephalus appendiculatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-02-18
Authors: Dennis, C.A., Homans, S.W.
PDB entry 3gar: A PH-DEPENDENT STABLIZATION OF AN ACTIVE SITE LOOP OBSERVED FROM LOW AND HIGH PH CRYSTAL STRUCTURES OF MUTANT MONOMERIC GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE
Classification: PURINE BIOSYNTHESIS
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1998-05-13
Authors: Su, Y., Yamashita, M.M., Greasley, S.E., Mullen, C.A., Shim, J.H., Jennings, P.A., Benkovic, S.J., Wilson, I.A.
PDB entry 3gas: Crystal Structure of Helicobacter pylori Heme Oxygenase Hugz in Complex with Heme
Classification: OXIDOREDUCTASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-18
Authors: Jiang, F., Hu, Y.L., Guo, Y., Guo, G., Zou, Q.M., Wang, D.C.
PDB entry 3gat: SOLUTION NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF CHICKEN GATA-1 BOUND TO DNA, 34 STRUCTURES
Classification: TRANSCRIPTION/DNA
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 1997-11-07
Authors: Clore, G.M., Tjandra, N., Starich, M., Omichinski, J.G., Gronenborn, A.M.
PDB entry 3gau: Solution structure of Human Complement Factor H in 50 mM NaCl buffer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: SOLUTION SCATTERING
Resolution: 0 Å
Deposited: 2009-02-18
Authors: Okemefuna, A.I., Nan, R., Gor, J., Perkins, S.J.
PDB entry 3gav: Solution structure of Human Complement Factor H in 137 mM NaCl buffer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: SOLUTION SCATTERING
Resolution: 0 Å
Deposited: 2009-02-18
Authors: Okemefuna, A.I., Nan, R., Gor, J., Perkins, S.J.
PDB entry 3gaw: Solution structure of Human Complement Factor H in 250 mM NaCl buffer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: SOLUTION SCATTERING
Resolution: 0 Å
Deposited: 2009-02-18
Authors: Okemefuna, A.I., Nan, R., Gor, J., Perkins, S.J.
PDB entry 3gax: Crystal structure of monomeric human cystatin C stabilized against aggregation
Classification: HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-02-18
Authors: Kolodziejczyk, R., Michalska, K., Hernandez-Santoyo, A., Wahlbom, M., Grubb, A., Jaskolski, M.
PDB entry 3gay: Structure of Giardia fructose-1,6-biphosphate aldolase in complex with tagatose-1,6-biphosphate
Classification: LYASE
Source organism: Giardia intestinalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-18
Authors: Galkin, A., Herzberg, O.
PDB entry 3gaz: Crystal structure of an alcohol dehydrogenase superfamily protein from Novosphingobium aromaticivorans
Classification: OXIDOREDUCTASE
Source organism: Novosphingobium aromaticivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2009-02-18
Authors: Damodharan, L., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gb0: Crystal structure of aminopeptidase PepT (NP_980509.1) from Bacillus cereus ATCC 10987 at 2.04 A resolution
Classification: HYDROLASE
Source organism: Bacillus cereus ATCC 10987
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2009-02-18
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gb1: STRUCTURES OF B1 DOMAIN OF STREPTOCOCCAL PROTEIN G
Classification: IMMUNOGLOBULIN BINDING PROTEIN
Source organism: Streptococcus sp. 'group G'
Experimental method: SOLUTION NMR
Deposited: 1999-05-02
Authors: Clore, G.M.
PDB entry 3gb2: GSK3beta inhibitor complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-02-18
Authors: Mol, C.D.
PDB entry 3gb3: X-ray structure of genetically encoded photosensitizer KillerRed in native form
Classification: FLUORESCENT PROTEIN
Source organism: Anthomedusae sp. DC-2005
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-02-18
Authors: Pletnev, S., Pletneva, N.V., Pletnev, V.Z.
PDB entry 3gb4: Crystal Structure of Dicamba Monooxygenase with Non-heme Cobalt and Dicamba
Classification: ELECTRON TRANSPORT, OXIDOREDUCTASE
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-02-18
Authors: Rydel, T.J., Sturman, E.J., Moshiri, F., Brown, G.R., Qi, Y.
PDB entry 3gb5: Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-18
Authors: Thomas, S.R., McTamney, P.M., Adler, J.M., LaRonde-LeBlanc, N., Rokita, S.E.
PDB entry 3gb6: Structure of Giardia fructose-1,6-biphosphate aldolase D83A mutant in complex with fructose-1,6-bisphosphate
Classification: LYASE
Source organism: Giardia intestinalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-18
Authors: Galkin, A., Herzberg, O.
PDB entry 3gb7: Potassium Channel KcsA-Fab complex in Li+
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2009-02-18
Authors: Thompson, A.N., Ilsoo, K., Panosian, T.D., Iverson, T.M., Allen, T.W., Nimigean, C.M.
PDB entry 3gb8: Crystal structure of CRM1/Snurportin-1 complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-02-19
Authors: Dong, X., Biswas, A., Suel, K.E., Jackson, L.K., Martinez, R., Gu, H., Chook, Y.M.
PDB entry 3gb9: Human purine nucleoside phosphorylase double mutant E201Q,N243D complexed with 2-fluoroadenine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-02-19
Authors: Sawaya, M.R., Afshar, S.
PDB entry 3gba: X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with dysiherbaine at 1.35A resolution
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2009-02-19
Authors: Frydenvang, K., Naur, P., Gajhede, M., Kastrup, J.S.
PDB entry 3gbb: X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with MSVIII-19 at 2.10A resolution
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-02-19
Authors: Frydenvang, K., Naur, P., Gajhede, M., Kastrup, J.S.
PDB entry 3gbd: Crystal structure of the isomaltulose synthase SmuA from Protaminobacter rubrum
Classification: ISOMERASE
Source organism: Protaminobacter rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-02-19
Authors: Ravaud, S., Robert, X., Haser, R., Aghajari, N.
PDB entry 3gbe: Crystal structure of the isomaltulose synthase SmuA from Protaminobacter rubrum in complex with the inhibitor deoxynojirimycin
Classification: ISOMERASE
Source organism: Protaminobacter rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-02-19
Authors: Ravaud, S., Robert, X., Haser, R., Aghajari, N.
PDB entry 3gbf: Phpd with cadmium complexed with hydroethylphosphonate (HEP)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces viridochromogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2009-02-19
Authors: Zhang, H., Nair, S.K.
PDB entry 3gbg: Crystal Structure of ToxT from Vibrio Cholerae O395
Classification: transcription regulator
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-02-19
Authors: Lowden, M.J., Kull, F.J.
PDB entry 3gbh: CRYSTAL STRUCTURE OF A PUTATIVE NAD(P)H:FMN OXIDOREDUCTASE (SE1966) FROM STAPHYLOCOCCUS EPIDERMIDIS ATCC 12228 AT 2.00 A RESOLUTION
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus epidermidis ATCC 12228
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-19
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3gbi: The Rational Design and Structural Analysis of a Self-Assembled Three-Dimensional DNA Crystal
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.018 Å
Deposited: 2009-02-19
Authors: Birktoft, J.J., Zheng, J., Seeman, N.C.
PDB entry 3gbj: Crystal structure of the motor domain of kinesin KIF13B bound with ADP
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2009-02-19
Authors: Tong, Y., Shen, L., Shen, Y., Tempel, W., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3gbk: Crystal Structure of Human PPAR-gamma Ligand Binding Domain Complexed with a Potent and Selective Agonist
Classification: ligand binding protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-02-19
Authors: Peng, Y.-H., Lin, C.-H., Hsieh, H.-P., Wu, S.-Y.
PDB entry 3gbl: Crystal structure of grass carp Beta2-microglobulin
Classification: IMMUNE SYSTEM
Source organism: Ctenopharyngodon idella
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-02-20
Authors: Chen, W., Gao, F., Xia, C., Gao, G.F.
PDB entry 3gbm: Crystal Structure of Fab CR6261 in Complex with a H5N1 influenza virus hemagglutinin.
Classification: viral protein / immune system
Source organism: Homo sapiens; Influenza A virus (A/Viet Nam/1203/2004(H5N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-02-20
Authors: Ekiert, D.C., Elsliger, M.A., Wilson, I.A.
PDB entry 3gbn: Crystal Structure of Fab CR6261 in Complex with the 1918 H1N1 influenza virus hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Brevig Mission/1/1918(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-02-20
Authors: Ekiert, D.C., Elsliger, M.A., Wilson, I.A.
PDB entry 3gbo: Crystal structure of BmooMPalpha-I, a non-hemorrhagic metalloproteinase isolated from Bothrops moojeni snake venom
Classification: HYDROLASE
Source organism: Bothrops moojeni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2009-02-20
Authors: Akao, P.K., Tonoli, C.C.C., Murakami, M.T.
PDB entry 3gbp: STRUCTURE OF THE PERIPLASMIC GLUCOSE/GALACTOSE RECEPTOR OF SALMONELLA TYPHIMURIUM
Classification: PERIPLASMIC BINDING PROTEIN
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 1990-01-25
Authors: Mowbray, S.L.
PDB entry 3gbq: SOLUTION NMR STRUCTURE OF THE GRB2 N-TERMINAL SH3 DOMAIN COMPLEXED WITH A TEN-RESIDUE PEPTIDE DERIVED FROM SOS DIRECT REFINEMENT AGAINST NOES, J-COUPLINGS, AND 1H AND 13C CHEMICAL SHIFTS, MINIMIZED AVERAGE STRUCTURE
Classification: COMPLEX (SIGNAL TRANSDUCTION/PEPTIDE)
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 1996-12-23
Authors: Wittekind, M., Mapelli, C., Lee, V., Goldfarb, V., Friedrichs, M.S., Meyers, C.A., Mueller, L.
PDB entry 3gbr: Anthranilate phosphoribosyl-transferase (TRPD) double mutant D83G F149S from S. solfataricus
Classification: TRANSFERASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-02-20
Authors: Bruning, M., Schlee, S., Deuss, M., Ivens, A., Mayans, O., Sterner, R.
PDB entry 3gbs: Crystal structure of Aspergillus oryzae cutinase
Classification: HYDROLASE
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-02-20
Authors: Gosser, Y., Lu, Z., Alemu, G., Li, H., Kong, X., Liu, Z., Montclare, J.
PDB entry 3gbt: Crystal structure of gluconate kinase from Lactobacillus acidophilus
Classification: TRANSFERASE
Source organism: Lactobacillus acidophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-02-20
Authors: Zhang, Z., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gbu: Crystal structure of an uncharacterized sugar kinase PH1459 from Pyrococcus horikoshii in complex with ATP
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-02-20
Authors: Eswaramoorthy, S., Kumar, G., Zhang, Z., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gbv: Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis
Classification: TRANSCRIPTION REGULATOR
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-02-20
Authors: Syed Ibrahim, B., Kumaran, D., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gbw: Crystal structure of the first PHR domain of the Mouse Myc-binding protein 2 (MYCBP-2)
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2009-02-20
Authors: Sampathkumar, P., Ozyurt, S.A., Wasserman, S.R., Klemke, R.L., Miller, S.A., Bain, K.T., Rutter, M.E., Tarun, G., Atwell, S., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gbx: Serine hydroxymethyltransferase from Salmonella typhimurium
Classification: TRANSFERASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-20
Authors: Osipiuk, J., Nocek, B., Zhou, M., Stam, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3gby: Crystal structure of a protein with unknown function CT1051 from Chlorobium tepidum
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Chlorobium tepidum TLS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2009-02-20
Authors: Fan, Y., Chang, C., Sather, A., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3gbz: Structure of the CMGC CDK Kinase from Giardia lamblia
Classification: TRANSFERASE
Source organism: Giardia lamblia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-02-20
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3gc0: Structure of the CMGC CDK Kinase from Giardia lamblia in complex with AMP
Classification: TRANSFERASE
Source organism: Giardia lamblia
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-20
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3gc1: Crystal structure of bovine lactoperoxidase
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-02-21
Authors: Singh, A.K., Singh, N., Sinha, M., Kaur, P., Srinivasan, A., Sharma, S., Singh, T.P.
PDB entry 3gc2: 1.85 Angstrom Crystal Structure of O-succinylbenzoate Synthase from Salmonella typhimurium in Complex with Succinic Acid
Classification: LYASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-02-21
Authors: Minasov, G., Wawrzak, Z., Skarina, T., Onopriyenko, O., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3gc3: Crystal Structure of Arrestin2S and Clathrin
Classification: ENDOCYTOSIS
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-02-21
Authors: Williams, J.C., Kang, D.S.
PDB entry 3gc4: tRNA-guanine transglycosylase in complex with inhibitor
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-21
Authors: Ritschel, T., Heine, A., Klebe, G.
PDB entry 3gc5: tRNA-guanine transglycosylase in complex with 6-amino-4-(2-aminoethyl)-2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-02-21
Authors: Ritschel, T., Heine, A., Klebe, G.
PDB entry 3gc6: Structural insights into the catalytic mechanism of CD38: Evidence for a conformationally flexible covalent enzyme-substrate complex.
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2009-02-21
Authors: Egea, P.F., Muller-Steffner, H., Stroud, R.M., Oppenheimer, N., Kellenberger, E., Schuber, F.
PDB entry 3gc7: The structure of p38alpha in complex with a dihydroquinazolinone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-21
Authors: Scapin, G., Patel, S.B.
PDB entry 3gc8: The structure of p38beta C162S in complex with a dihydroquinazolinone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-02-21
Authors: Scapin, G., Patel, S.B.
PDB entry 3gc9: The structure of p38beta C119S, C162S in complex with a dihydroquinazolinone inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-02-21
Authors: Scapin, G., Patel, S.B.
PDB entry 3gca: The structural basis for recognition of the preQ0 metabolite by an unusually small riboswitch aptamer domain
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2009-02-21
Authors: Spitale, R.C., Wedekind, J.E.
PDB entry 3gcb: GAL6 (YEAST BLEOMYCIN HYDROLASE) MUTANT C73A/DELTAK454
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 1998-02-27
Authors: Joshua-Tor, L., Zheng, W., Johnston, S.A.
PDB entry 3gcc: SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, 46 STRUCTURES
Classification: TRANSCRIPTION FACTOR
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 1998-03-13
Authors: Allen, M.D., Yamasaki, K., Ohme-Takagi, M., Tateno, M., Suzuki, M.
PDB entry 3gcd: Structure of the V. cholerae RTX cysteine protease domain in complex with an aza-Leucine peptide inhibitor
Classification: TOXIN/INHIBITOR
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-02-21
Authors: Lupardus, P.J., Garcia, K.C., Shen, A., Bogyo, M.
PDB entry 3gce: Ferredoxin of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
Classification: OXIDOREDUCTASE
Source organism: Nocardioides aromaticivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-22
Authors: Inoue, K., Nojiri, H.
PDB entry 3gcf: Terminal oxygenase of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
Classification: OXIDOREDUCTASE
Source organism: Nocardioides aromaticivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-02-22
Authors: Inoue, K., Nojiri, H.
PDB entry 3gcg: crystal structure of MAP and CDC42 complex
Classification: SIGNALING PROTEIN/TRANSCRIPTION
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-02-22
Authors: Chai, J., Huang, Z., Feng, Y., Wu, X.
PDB entry 3gch: CHEMISTRY OF CAGED ENZYMES. BINDING OF PHOTOREVERSIBLE CINNAMATES TO CHYMOTRYPSIN
Classification: HYDROLASE (SERINE PROTEINASE)
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1989-09-25
Authors: Stoddard, B.L., Ringe, D., Petsko, G.A.
PDB entry 3gci: Crystal Structure of the Complex Formed Between a New Isoform of Phospholipase A2 with C-terminal Amyloid Beta Heptapeptide at 2 A Resolution
Classification: HYDROLASE
Source organism: Naja sagittifera; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2009-02-22
Authors: Mirza, Z., Vikram, G., Singh, N., Sinha, M., Bhushan, A., Sharma, S., Srinivasan, A., Kaur, P., Singh, T.P.
PDB entry 3gcj: Mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2009-02-22
Authors: Singh, A.K., Singh, N., Sinha, M., Kaur, P., Srinivasan, A., Sharma, S., Singh, T.P.
PDB entry 3gck: Mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-02-22
Authors: Singh, A.K., Singh, N., Sinha, M., Bhushan, A., Kaur, P., Srinivasan, A., Sharma, S., Singh, T.P.
PDB entry 3gcl: Mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-02-22
Authors: Singh, A.K., Singh, N., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 3gcm: Crystal Structure of E. coli polynucleotide phosphorylase bound to RNA and RNase E
Classification: transferase / protein binding
Source organism: Escherichia coli E24377A; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-02-22
Authors: Nurmohamed, S., Luisi, B.L.
PDB entry 3gcn: Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with OMP peptide (YQF)
Classification: HYDROLASE/HYDROLASE ACTIVATOR
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.002 Å
Deposited: 2009-02-22
Authors: Sohn, J., Sauer, R.T., Grant, R.A.
PDB entry 3gco: Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYQF OMP peptide
Classification: HYDROLASE/HYDROLASE ACTIVATOR
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.798 Å
Deposited: 2009-02-22
Authors: Sohn, J., Grant, R.A., Sauer, R.T.
PDB entry 3gcp: Human P38 MAP Kinase in Complex with SB203580
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-02-22
Authors: Gruetter, C., Simard, J.R., Rauh, D.
PDB entry 3gcq: Human P38 MAP kinase in complex with RL45
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-22
Authors: Gruetter, C., Simard, J.R., Getlik, M., Rauh, D.
PDB entry 3gcs: Human P38 MAP kinase in complex with Sorafenib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-02-22
Authors: Gruetter, C., Simard, J.R., Rauh, D.
PDB entry 3gct: STRUCTURE OF GAMMA-*CHYMOTRYPSIN IN THE RANGE $P*H 2.0 TO $P*H 10.5 SUGGESTS THAT GAMMA-CHYMOTRYPSIN IS A COVALENT ACYL-ENZYME ADDUCT AT LOW $P*H
Classification: HYDROLASE/PEPTIDE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 1990-09-04
Authors: Dixon, M.M., Matthews, B.W.
PDB entry 3gcu: Human P38 MAP kinase in complex with RL48
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-02-22
Authors: Gruetter, C., Simard, J.R., Getlik, M., Rauh, D.
PDB entry 3gcv: Human P38 MAP Kinase in Complex with RL62
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-02-22
Authors: Gruetter, C., Simard, J.R., Getlik, M., Rauh, D.
PDB entry 3gcw: PCSK9:EGFA(H306Y)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-02-22
Authors: Kwon, H.J.
PDB entry 3gcx: PCSK9:EGFA (pH 7.4)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-02-22
Authors: McNutt, M.C., Kwon, H.J., Chen, C., Chen, J.R., Horton, J.D., Lagace, T.A.
PDB entry 3gcy: Crystal studies of d(CACGCG).d(CGCGTG) grown in presence of calcium chloride
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-23
Authors: Mandal, P.K., Venkadesh, S., Nandini, M., Gautham, N.
PDB entry 3gcz: Yokose virus Methyltransferase in complex with AdoMet
Classification: TRANSFERASE
Source organism: Yokose virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-02-23
Authors: Bollati, M., Milani, M., Mastrangelo, E., Bolognesi, M., Structural Proteomics in Europe (SPINE)
PDB entry 3gd0: Crystal structure of laminaripentaose-producing beta-1,3-glucanase
Classification: HYDROLASE
Source organism: Streptomyces matensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2009-02-23
Authors: Wu, H.M., Hsu, M.T., Liu, S.W., Lai, C.C., Li, Y.K., Wang, W.C.
PDB entry 3gd1: Structure of an Arrestin/Clathrin complex reveals a novel clathrin binding domain that modulates receptor trafficking
Classification: ENDOCYTOSIS
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2009-02-23
Authors: Kang, D.S., Kern, R.C., Puthenveedu, M.A., von Zastrow, M., Williams, J.C., Benovic, J.L.
PDB entry 3gd2: isoxazole ligand bound to farnesoid X receptor (FXR)
Classification: TRANSCRIPTION/TRANSCRIPTION ACTIVATOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-02-23
Authors: Madauss, K.P., Williams, S.P., Deaton, D.N., Wisely, G.B., Mcfadyen, R.B.
PDB entry 3gd3: Crystal structure of a naturally folded murine apoptosis inducing factor
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2009-02-23
Authors: Sevrioukova, I.F.
PDB entry 3gd4: Crystal structure of the reduced, NAD-bound form of murine apoptosis inducing factor
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2009-02-23
Authors: Sevrioukova, I.F.
PDB entry 3gd5: Crystal structure of ornithine carbamoyltransferase from Gloeobacter violaceus
Classification: TRANSFERASE
Source organism: Gloeobacter violaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-02-23
Authors: Fedorov, A.A., Fedorov, E.V., Toro, R., Ramagopal, U.A., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gd6: Crystal structure of divergent enolase from Oceanobacillus iheyensis complexed with phosphate
Classification: ISOMERASE, LYASE
Source organism: Oceanobacillus iheyensis HTE831
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-02-23
Authors: Fedorov, A.A., Fedorov, E.V., Sauder, J.M., Burley, S.K., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gd7: Crystal structure of human NBD2 complexed with N6-Phenylethyl-ATP (P-ATP)
Classification: HYDROLASE
Source organism: Escherichia coli K-12; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-02-23
Authors: Atwell, S., Antonysamy, S., Conners, K., Emtage, S., Gheyi, T., Lewis, H.A., Lu, F., Sauder, J.M., Wasserman, S.R., Zhao, X.
PDB entry 3gd8: Crystal Structure of Human Aquaporin 4 at 1.8 and its Mechanism of Conductance
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-23
Authors: Ho, J.D., Yeh, R., Sandstrom, A., Chorny, I., Harries, W.E.C., Robbins, R.A., Miercke, L.J.W., Stroud, R.M., Center for Structures of Membrane Proteins (CSMP)
PDB entry 3gd9: Crystal structure of laminaripentaose-producing beta-1,3-glucanase in complex with laminaritetraose
Classification: HYDROLASE
Source organism: Streptomyces matensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-23
Authors: Wu, H.M., Hsu, M.T., Liu, S.W., Lai, C.C., Li, Y.K., Wang, W.C.
PDB entry 3gda: Crystal study of d(CACGCG).d(CGCGTG) grwon in presence of stannous chloride
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2009-02-23
Authors: Mandal, P.K., Venkadesh, S., Gautham, N.
PDB entry 3gdb: Crystal structure of Spr0440 glycoside hydrolase domain, Endo-D from Streptococcus pneumoniae R6
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2009-02-24
Authors: Jiang, Y.-L., Frolet, C., Di-guilmi, A.-M., Zhou, C.-Z., Vernet, T., Chen, Y.-X.
PDB entry 3gdc: Crystal structure of multicopper oxidase
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter sp. FB24
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-24
Authors: MacPherson, I.S., Lee, W.C., Liang, T.I., Murphy, M.E.P.
PDB entry 3gdd: An inverted anthraquinone-DNA crystal structure
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-02-24
Authors: Subirana, J.A., De Luchi, D., Wright, G., Gouyette, C.
PDB entry 3gde: The closed conformation of ATP-dependent DNA ligase from Archaeoglobus fulgidus
Classification: LIGASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-02-24
Authors: Kim, D.J., Kim, H.-W., Kim, O., Kim, H.S., Lee, S.J., Suh, S.W.
PDB entry 3gdf: Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum.
Classification: OXIDOREDUCTASE
Source organism: Cladosporium herbarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-02-24
Authors: Nuess, D., Goettig, P., Magler, I., Denk, U., Breitenbach, M., Schneider, P.B., Brandstetter, H., Simon-Nobbe, B.
PDB entry 3gdg: Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum.
Classification: OXIDOREDUCTASE
Source organism: Cladosporium herbarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-02-24
Authors: Nuess, D., Goettig, P., Magler, I., Denk, U., Breitenbach, M., Schneider, P.B., Brandstetter, H., Simon-Nobbe, B.
PDB entry 3gdh: Methyltransferase domain of human Trimethylguanosine Synthase 1 (TGS1) bound to m7GTP and adenosyl-homocysteine (active form)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-24
Authors: Monecke, T., Dickmanns, A., Ficner, R.
PDB entry 3gdi: Mammalian Clock Protein mPER2 - Crystal Structure of a PAS Domain Fragment
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-02-24
Authors: Hennig, S., Wolf, E.
PDB entry 3gdj: Crystal structure determination of camel(Camelus dromedarius)hemoglobin at 2 angstrom resolution
Classification: OXYGEN TRANSPORT
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-24
Authors: Balasubramanian, M., Sathya Moorthy, P., Neelagandan, K., Ponnuswamy, M.N.
PDB entry 3gdk: Crystal structure of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-24
Authors: Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.
PDB entry 3gdl: Crystal structure of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae complexed with 6-azauridine 5'-monophosphate
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-02-24
Authors: Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.
PDB entry 3gdm: Crystal structure of the K93R mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-02-24
Authors: Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.
PDB entry 3gdn: Almond hydroxynitrile lyase in complex with benzaldehyde
Classification: LYASE
Source organism: Prunus dulcis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2009-02-24
Authors: Dreveny, I., Gruber, K., Kratky, C.
PDB entry 3gdo: Crystal structure of putative oxidoreductase yvaA from Bacillus subtilis
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis subsp. subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2009-02-24
Authors: Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3gdp: Hydroxynitrile lyase from almond, monoclinic crystal form
Classification: LYASE
Source organism: Prunus dulcis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2009-02-24
Authors: Dreveny, I., Gruber, K., Kratky, C.
PDB entry 3gdq: Crystal structure of the human 70kDa heat shock protein 1-like ATPase domain in complex with ADP and inorganic phosphate
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-24
Authors: Wisniewska, M., Moche, M., Arrowsmith, C.H., Berglund, H., Bountra, C., Collins, R., Dahlgren, L.G., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Karlberg, T., Kotenyova, T., Lehtio, L., Nilsson, M.E., Nordlund, P., Nyman, T., Persson, C., Sagemark, J., Schutz, P., Siponen, M., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Weigelt, J., Welin, M., Schueler, H., Structural Genomics Consortium (SGC)
PDB entry 3gdr: Crystal structure of the D91N mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-02-24
Authors: Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.
PDB entry 3gds: Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYYF peptide
Classification: HYDROLASE/HYDROLASE ACTIVATOR
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2009-02-24
Authors: Sohn, J., Grant, R.A., Sauer, R.T.
PDB entry 3gdt: Crystal structure of the D91N mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae complexed with 6-azauridine 5'-monophosphate
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-02-24
Authors: Fedorov, A.A., Fedorov, E.V., Wood, B.M., Gerlt, J.A., Almo, S.C.
PDB entry 3gdu: Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YRF peptide
Classification: HYDROLASE/HYDROLASE ACTIVATOR
Source organism: Escherichia Coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-02-24
Authors: Sohn, J., Grant, R.A., Sauer, R.T.
PDB entry 3gdv: Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YQF peptide
Classification: HYDROLASE/HYDROLASE ACTIVATOR
Source organism: Escherichia Coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.489 Å
Deposited: 2009-02-24
Authors: Sohn, J., Grant, R.A., Sauer, R.T.
PDB entry 3gdw: Crystal structure of sigma-54 interaction domain protein from Enterococcus faecalis
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-24
Authors: Chang, C., Sather, A., Buck, K., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3gdx: Dna polymerase beta with a gapped DND substrate and dTMP(CF2)PP
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-02-24
Authors: Wilson, S.H., Batra, V.K., Pedersen, L.C.
PDB entry 3gdz: Crystal structure of arginyl-tRNA synthetase from Klebsiella pneumoniae subsp. pneumoniae
Classification: LIGASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-02-24
Authors: Chang, C., Wu, R., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ge1: 2.7 Angstrom Crystal Structure of Glycerol Kinase (glpK) from Staphylococcus aureus in Complex with ADP and Glycerol
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus COL
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-02-24
Authors: Minasov, G., Brunzelle, J., Skarina, T., Onopriyenko, O., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3ge2: Crystal structure of putative lipoprotein SP_0198 from Streptococcus pneumoniae
Classification: LIPOPROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.203 Å
Deposited: 2009-02-24
Authors: Kim, Y., Zhang, R., Joachimiak, G., Gornicki, P., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ge3: Crystal Structure of the reduced Toluene 4-Monooxygenase HD T201A mutant complex
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas mendocina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2009-02-24
Authors: Elsen, N.L., Bailey, L.J., Fox, B.G.
PDB entry 3ge4: Crystal structure of ferritin:DNA-binding protein DPS from Brucella Melitensis
Classification: DNA BINDING PROTEIN
Source organism: Brucella melitensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3ge5: Crystal structure of a putative nad(p)h:fmn oxidoreductase (pg0310) from porphyromonas gingivalis w83 at 1.70 A resolution
Classification: OXIDOREDUCTASE
Source organism: Porphyromonas gingivalis W83
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-02-25
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ge6: CRYSTAL STRUCTURE OF A PUTATIVE NITROREDUCTASE IN COMPLEX WITH FMN (EXIG_2970) FROM EXIGUOBACTERIUM SIBIRICUM 255-15 AT 1.85 A RESOLUTION
Classification: OXIDOREDUCTASE
Source organism: Exiguobacterium sibiricum 255-15
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-02-25
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ge7: tRNA-guanine transglycosylase in complex with 6-amino-4-{2-[(cyclopentylmethyl)amino]ethyl}-2-(methylamino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-02-25
Authors: Ritschel, T., Heine, A., Klebe, G.
PDB entry 3ge8: Toluene 4-monooxygenase HD T201A diferric, resting state complex
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas mendocina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2009-02-25
Authors: Elsen, N.L., Bailey, L.J., Hauser, A.D., Fox, B.G.
PDB entry 3ge9: A Structurally Atypical ThyX from Corynebacterium glutamicum NCHU 87078 Is Not Required for Thymidylate Biosynthesis
Classification: TRANSFERASE
Source organism: Corynebacterium glutamicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2009-02-25
Authors: Wang, W.-C., Liu, J.-S., Chang, C.-M.