LiteFold/PDB huggingface dataset:
PDB entry 6d6k: Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-04-21
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6d6l: The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 14
Classification: signaling protein/agonist
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2018-04-21
Authors: Dong, S.H., Nair, S.K.
PDB entry 6d6m: The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 15
Classification: signaling protein/agonist
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-04-21
Authors: Dong, S.H., Nair, S.K.
PDB entry 6d6n: The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 16
Classification: signaling protein/agonist
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2018-04-21
Authors: Dong, S.H., Nair, S.K.
PDB entry 6d6o: The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 17
Classification: signaling protein/agonist
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2018-04-21
Authors: Dong, S.H., Nair, S.K.
PDB entry 6d6p: The structure of ligand binding domain of LasR in complex with TP-1 homolog, compound 19
Classification: signaling protein/agonist
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2018-04-21
Authors: Dong, S.H., Nair, S.K.
PDB entry 6d6q: Human nuclear exosome-MTR4 RNA complex - overall reconstruction
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2018-04-22
Authors: Weick, E.-M., Lima, C.D.
PDB entry 6d6r: Human nuclear exosome-MTR4 RNA complex - composite map after focused reconstruction
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2018-04-22
Authors: Weick, E.-M., Lima, C.D.
PDB entry 6d6s: Solution structure of Trigger Factor dimer
Classification: CHAPERONE
Source organism: Escherichia coli (strain K12)
Experimental method: SOLUTION NMR
Deposited: 2018-04-22
Authors: Saio, T., Kawagoe, S., Ishimori, K., Kalodimos, C.G.
PDB entry 6d6t: Human GABA-A receptor alpha1-beta2-gamma2 subtype in complex with GABA and flumazenil, conformation B
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2018-04-22
Authors: Zhu, S., Noviello, C.M., Teng, J., Walsh Jr, R.M., Kim, J.J., Hibbs, R.E.
PDB entry 6d6u: Human GABA-A receptor alpha1-beta2-gamma2 subtype in complex with GABA and flumazenil, conformation A
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2018-04-22
Authors: Zhu, S., Noviello, C.M., Teng, J., Walsh Jr, R.M., Kim, J.J., Hibbs, R.E.
PDB entry 6d6v: CryoEM structure of Tetrahymena telomerase with telomeric DNA at 4.8 Angstrom resolution
Classification: REPLICATION
Source organism: Tetrahymena thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2018-04-22
Authors: Jiang, J., Wang, Y., Susac, L., Chan, H., Basu, R., Zhou, Z.H., Feigon, J.
PDB entry 6d6w: Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate
Classification: HYDROLASE
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-04-23
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6d6x: HSP40 co-chaperone Sis1 J-domain
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR
Deposited: 2018-04-23
Authors: Pinheiro, G.M.S., Amorim, G.C., Iqbal, A., Ramos, C.H.I., Almeida, F.C.L.
PDB entry 6d6y: AprA Methyltransferase 2 - GNAT didomain in complex with SAH
Classification: TRANSFERASE
Source organism: Moorea bouillonii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.246 Å
Deposited: 2018-04-23
Authors: Sikkema, A.P., Smith, J.L.
PDB entry 6d6z: Structure of the malate racemase apoprotein from Thermoanaerobacterium thermosaccharolyticum
Classification: ISOMERASE
Source organism: Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2018-04-23
Authors: Fellner, M., Hausinger, R.P., Hu, J.
PDB entry 6d71: Crystal Structure of the Human Miro1 N-terminal GTPase bound to GTP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71808 Å
Deposited: 2018-04-23
Authors: Smith, K.P., Focia, P.J., Rice, S.E., Freymann, D.M.
PDB entry 6d72: Crystal structure of spermidine/spermine N-acetyltransferase SpeG from Yersinia pestis in complex with calcium ions.
Classification: TRANSFERASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2018-04-23
Authors: Filippova, E.V., Minasov, G., Kiryukhina, O., Anderson, W.F., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6d73: Cryo-EM structure of the zebrafish TRPM2 channel in the presence of Ca2+
Classification: TRANSPORT PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2018-04-23
Authors: Yin, Y., Wu, M., Borschel, W.F., Lander, G.C., Lee, S.-Y.
PDB entry 6d74: Direct Activation of the Executioner Domain of MLKL by a Select Repertoire of Inositol Phosphates
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2018-04-24
Authors: Royappa, G.C., McNamara, D.E., Moldoveanu, T.
PDB entry 6d78: The complex between high-affinity TCR DMF5(alpha-D26Y,beta-L98W) and human Class I MHC HLA-A2 with the bound MART-1(27-35)peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.347 Å
Deposited: 2018-04-24
Authors: Hellman, L.M., Singh, N.K.
PDB entry 6d79: Structure of CysZ, a sulfate permease from Pseudomonas Fragi
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas fragi A22
Experimental method: X-RAY DIFFRACTION
Resolution: 3.501 Å
Deposited: 2018-04-24
Authors: Sanghai, Z.A., Liu, Q., Clarke, O.B., Banerjee, S., Rajashankar, K.R., Hendrickson, W.A., Mancia, F.
PDB entry 6d7a: Structure of T. gondii PLP1 beta-rich domain
Classification: LIPID BINDING PROTEIN
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2018-04-24
Authors: Guerra, A.J., Koropatkin, N.M., Wawrzak, Z., Bahr, C.M.E., Carruthers, V.B.
PDB entry 6d7c: The crystal structure of hemagglutinin from A/Hong Kong/61/2016 H7N9 influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2018-04-24
Authors: Yang, H., Stevens, J.
PDB entry 6d7f: Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide
Classification: HYDROLASE
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-04-24
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6d7g: Structure of 5F3 TCR in complex with HLA-A2/MART-1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2018-04-24
Authors: Roy, S., Adams, E.J.
PDB entry 6d7h: CTX-M-14 Apoenzyme
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2018-04-24
Authors: Kemp, M., Nichols, D., Chen, Y.
PDB entry 6d7i: CTX-M-14 Apoenzyme D233N Point Mutant
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2018-04-24
Authors: Kemp, M., Nichols, D., Chen, Y.
PDB entry 6d7j: The Crystal Structure of Parabacteroides merdae Beta-Glucuronidase (GUS) with Glycerol in Active-Site
Classification: HYDROLASE
Source organism: Parabacteroides merdae CL03T12C32
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2018-04-24
Authors: Little, M.S., Redinbo, M.R.
PDB entry 6d7k: Complex structure of Methane monooxygenase hydroxylase in complex with inhibitory subunit
Classification: oxidoreductase/inhibitor
Source organism: Methylosinus sporium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-04-24
Authors: Kim, H., Lee, S.J., Cho, U.-S.
PDB entry 6d7l: Cytoplasmic domain of TRPC3
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2018-04-25
Authors: Sierra-Valdez, F.J., Azumaya, C.M., Nakagawa, T., Cordero-Morales, J.F.
PDB entry 6d7m: Crystal structure of the W184R/W231R Importin alpha mutant
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.187 Å
Deposited: 2018-04-25
Authors: Pedersen, L.C., London, R.E., Gabel, S.A.
PDB entry 6d7n: Crystal structure of the W357R/W399R Importin alpha mutant
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Panicum virgatum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-04-25
Authors: Pedersen, L.C., London, R.E., Gabel, S.A.
PDB entry 6d7o: Crystal Structure of Rat TRPV6* in complex with 2-Aminoethoxydiphenyl borate (2-APB)
Classification: membrane protein/inhibitor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2018-04-25
Authors: Singh, A.K., Saotome, K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6d7p: Crystal Structure of Rat TRPV6*-Y466A
Classification: membrane protein/inhibitor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.37 Å
Deposited: 2018-04-25
Authors: Singh, A.K., Saotome, K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6d7q: Crystal Structure of Rat TRPV6*-Y466A in complex with 2-Aminoethoxydiphenyl borate (2-APB)
Classification: membrane protein/inhibitor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.497 Å
Deposited: 2018-04-25
Authors: Singh, A.K., Saotome, K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6d7r: Crystal structure of an inactivate variant of the quorum-sensing master regulator HapR from protease-deficient non-O1, non-O139 Vibrio cholerae strain V2
Classification: TRANSCRIPTION
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-04-25
Authors: Cruite, J.T., Succo, P., Raychaudhuri, S., Kull, F.J.
PDB entry 6d7s: Cryo-EM structure of human TRPV6-Y467A in amphipols
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.34 Å
Deposited: 2018-04-25
Authors: Singh, A.K., Saotome, K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6d7t: Cryo-EM structure of human TRPV6-Y467A in complex with 2-Aminoethoxydiphenyl borate (2-APB)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.44 Å
Deposited: 2018-04-25
Authors: Singh, A.K., Saotome, K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6d7u: The crystal structure of hemagglutinin from A/Guangdong/17SF003/2016 H7N9 influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-04-25
Authors: Yang, H., Stevens, J.
PDB entry 6d7v: Crystal Structure of Rat TRPV6*- in complex with brominated 2-Aminoethoxydiphenyl borate (2-APB-Br)
Classification: membrane protein/inhibitor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.3 Å
Deposited: 2018-04-25
Authors: Singh, A.K., Saotome, K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6d7w: Cryo-EM structure of the mitochondrial calcium uniporter from N. fischeri at 3.8 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Aspergillus fischeri
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2018-04-25
Authors: Nguyen, N.X., Armache, J.-P., Cheng, Y., Bai, X.C.
PDB entry 6d7x: Crystal Structure of Rat TRPV6*-Y466A- in complex with brominated 2-Aminoethoxydiphenyl borate (2-APB-Br)
Classification: membrane protein/inhibitor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2018-04-25
Authors: Singh, A.K., Saotome, K., McGoldrick, L.L., Sobolevsky, A.I.
PDB entry 6d7y: 1.75 Angstrom Resolution Crystal Structure of the Toxic C-Terminal Tip of CdiA from Pseudomonas aeruginosa in Complex with Immune Protein
Classification: TOXIN
Source organism: Enterobacter cloacae; Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-04-25
Authors: Minasov, G., Shuvalova, L., Wawrzak, Z., Kiryukhina, O., Allen, J.P., Hauser, A.R., Anderson, W.F., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6d80: Cryo-EM structure of the mitochondrial calcium uniporter from N. fischeri bound to saposin
Classification: TRANSPORT PROTEIN
Source organism: Aspergillus fischeri; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2018-04-25
Authors: Nguyen, N.X., Armache, J.-P., Cheng, Y., Bai, X.C.
PDB entry 6d81: Structure of the Bovine p85a BH domain
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.248 Å
Deposited: 2018-04-25
Authors: Moore, S.A., Marshall, J.D., Anderson, D.H.
PDB entry 6d82: Structure of the Bovine p85a BH domain
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.407 Å
Deposited: 2018-04-25
Authors: Moore, S.A., Marshall, J.D., Anderson, D.H.
PDB entry 6d83: Structure of the cargo bound AP-1:Arf1:tetherin-Nef (L164A, L165A) dileucine mutant dimer monomeric subunit
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Human immunodeficiency virus 1; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.27 Å
Deposited: 2018-04-25
Authors: Buffalo, C.Z., Morris, K.L., Hurley, J.H.
PDB entry 6d84: Structure of the cargo bound AP-1:Arf1:tetherin-Nef (L164A, L165A) dileucine mutant dimer
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Human immunodeficiency virus 1; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.72 Å
Deposited: 2018-04-25
Authors: Buffalo, C.Z., Morris, K.L., Hurley, J.H.
PDB entry 6d85: Structure of the Bovine p85a BH domain E217K mutant
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.203 Å
Deposited: 2018-04-25
Authors: Moore, S.A., Marshall, J.D., Anderson, D.H.
PDB entry 6d86: Structure of the Bovine p85a BH domain
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2018-04-25
Authors: Moore, S.A., Marshall, J.D., Anderson, D.H.
PDB entry 6d87: Structure of the Bovine p85alpha BH domain, R262T mutant
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-04-25
Authors: Moore, S.A., Marshall, J.D., Anderson, D.H.
PDB entry 6d88: Tubulin-RB3_SLD-TTL in complex with compound 13f
Classification: CELL CYCLE
Source organism: Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.853 Å
Deposited: 2018-04-26
Authors: Kumar, G., Wang, Y., Li, W., White, S.W.
PDB entry 6d89: Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion
Classification: HYDROLASE
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-04-26
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6d8a: RsAgo Ternary Complex with guide RNA and Target DNA Containing A-A Bulge Within the Seed Segment of the Target Strand
Classification: RNA BINDING PROTEIN
Source organism: Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.251 Å
Deposited: 2018-04-26
Authors: Liu, Y., Esyunina, D., Olovnikov, I., Teplova, M., Patel, D.J.
PDB entry 6d8b: The crystal structure of hemagglutinin from A/Hong Kong/125/2017 H7N9 influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2018-04-26
Authors: Yang, H., Stevens, J.
PDB entry 6d8c: Cryo-EM structure of FLNaABD E254K bound to phalloidin-stabilized F-actin
Classification: STRUCTURAL PROTEIN
Source organism: Amanita phalloides; Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2018-04-26
Authors: Iwamoto, D.V., Huehn, A.R., Simon, B., Huet-Calderwood, C., Baldassarre, M., Sindelar, C.V., Calderwood, D.A.
PDB entry 6d8d: The crystal structure of hemagglutinin from A/Hong Kong/125/2017 influenza virus in complex with LSTb
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2018-04-26
Authors: Yang, H., Stevens, J.
PDB entry 6d8e: Discovery of a Highly Potent and Broadly Effective EGFR and HER2 Exon 20 Insertion Mutant Inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.537 Å
Deposited: 2018-04-26
Authors: Park, E., Eck, M.J.
PDB entry 6d8f: RsAgo Ternary Complex with Guide RNA and Target DNA Containing T-T Bulge Within the Seed Segment
Classification: RNA BINDING PROTEIN
Source organism: Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-04-26
Authors: Liu, Y., Esyunina, D., Olovnikov, I., Teplova, M., Patel, D.J.
PDB entry 6d8g: D341A D367A calcium binding mutant of Bacteroides uniformis beta-glucuronidase 2
Classification: HYDROLASE
Source organism: Bacteroides uniformis str. 3978 T3 ii
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2018-04-26
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6d8h: NMR solution structure of tamapin, mutant Y31+N
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-26
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d8i: Mycobacterium tuberculosis polyketide synthase 13 N-terminal acyl carrier protein domain
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2018-04-26
Authors: Tang, S., Sacchettini, J.
PDB entry 6d8j: Mycobacterium tuberculosis polyketide synthase 13 N-terminal acyl carrier protein domain
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2018-04-26
Authors: Tang, S., Sacchettini, J.
PDB entry 6d8k: Bacteroides multiple species beta-glucuronidase
Classification: HYDROLASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2018-04-26
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6d8l: Group I self-splicing intron P4-P6 domain mutant U131A (without isopropanol soaking)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14022 Å
Deposited: 2018-04-26
Authors: Shoffner, G.M.
PDB entry 6d8m: Group I self-splicing intron P4-P6 domain mutant A125U/G126U
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2018-04-26
Authors: Shoffner, G.M.
PDB entry 6d8n: Group I self-splicing intron P4-P6 domain mutant G134A/U185AA
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.95427 Å
Deposited: 2018-04-26
Authors: Shoffner, G.M.
PDB entry 6d8o: Group I self-splicing intron P4-P6 domain mutant A230U
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.80112 Å
Deposited: 2018-04-26
Authors: Shoffner, G.M.
PDB entry 6d8p: Ternary RsAgo Complex Containing Guide RNA Paired with Target DNA
Classification: RNA BINDING PROTEIN
Source organism: Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-04-26
Authors: Liu, Y., Esyunina, D., Olovnikov, I., Teplova, M., Patel, D.J.
PDB entry 6d8q: NMR solution structure of tamapin, mutant DP30/Y31+N
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-26
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d8r: NMR solution structure of tamapin, mutant E25K
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-26
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d8s: NMR solution structure of tamapin, mutant K27E
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-26
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d8t: NMR solution structure of tamapin, mutant E25K/K27E
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-26
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d8u: NMR solution structure of tamapin, mutant K20E
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-26
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d8v: Methyl-accepting Chemotaxis protein X
Classification: MEMBRANE PROTEIN
Source organism: Rhizobium meliloti (strain 1021)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-04-27
Authors: Shrestha, M., Schubot, F.D.
PDB entry 6d8w: Crystal structure of InvbI.18715.a.KN11: Influenza hemagglutinin from strain A/Jiangsu/ALSI/2011
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2018-04-27
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6d8x: PPAR gamma LBD complexed with the agonist GW1929
Classification: dna binding protein/AGONIST
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-04-27
Authors: Mou, T.C., Chrisman, I.M., Hughes, T.S., Sprang, S.R.
PDB entry 6d8y: NMR solution structure of tamapin, mutant Y31H
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-27
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d8z: Crystal Structure of the C-terminal Guanine Nucleotide Exchange Factor Module of Human Trio
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2018-04-27
Authors: Bandekar, S., Tesmer, J.J.
PDB entry 6d90: Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2018-04-27
Authors: Pisareva, V.P., Pisarev, A.V., Fernandez, I.S.
PDB entry 6d91: Crystal structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter in the outward-open, apo conformation
Classification: TRANSPORT PROTEIN
Source organism: Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
Experimental method: X-RAY DIFFRACTION
Resolution: 2.356 Å
Deposited: 2018-04-27
Authors: Bozzi, A.T., Zimanyi, C.M., Nicoludis, J.M., Gaudet, R.
PDB entry 6d92: Ternary RsAgo Complex with Guide RNA and Target DNA Containing A-A non-canonical pair at position 3
Classification: RNA BINDING PROTEIN
Source organism: Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2018-04-27
Authors: Liu, Y., Esyunina, D., Olovnikov, I., Teplova, M., Patel, D.J.
PDB entry 6d93: NMR solution structure of tamapin, mutant Y31A
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-27
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d94: Crystal structure of PPAR gamma in complex with Mediator of RNA polymerase II transcription subunit 1
Classification: dna binding protein/AGONIST
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-04-27
Authors: Mou, T.C., Chrisman, I.M., Hughes, T.S., Sprang, S.R.
PDB entry 6d95: Ternary RsAgo Complex with Guide RNA Paired and Target DNA containing A8-A8' Non-Canonical Pair
Classification: RNA BINDING PROTEIN
Source organism: Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-04-27
Authors: Liu, Y., Esyunina, D., Olovnikov, I., Teplova, M., Patel, D.J.
PDB entry 6d96: Structure of influenza neuraminidase from strain A/BrevigMission/1/1918(H1N1) expressed in HEK-293E cells
Classification: HYDROLASE
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-04-27
Authors: Campbell, A.C., Krause, K.L., Tanner, J.J.
PDB entry 6d97: Structure of aldehyde dehydrogenase 12 (ALDH12) from Zea mays
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-04-27
Authors: Tanner, J.J., Korasick, D.A., Kopecny, D.
PDB entry 6d99: Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GalNAc (open, oxidized)
Classification: ISOMERASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-04-28
Authors: Wangkanont, K., Kiessling, L.L., Forest, K.T.
PDB entry 6d9a: Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GalNAc (open, reduced)
Classification: ISOMERASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-04-28
Authors: Wangkanont, K., Kiessling, L.L., Forest, K.T.
PDB entry 6d9b: Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-glucose (open, oxidized)
Classification: ISOMERASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-04-28
Authors: Wangkanont, K., Kiessling, L.L., Forest, K.T.
PDB entry 6d9c: Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-glucose (open, reduced)
Classification: ISOMERASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2018-04-28
Authors: Wangkanont, K., Kiessling, L.L., Forest, K.T.
PDB entry 6d9d: Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GlcNAc (open, oxidized)
Classification: ISOMERASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-04-28
Authors: Wangkanont, K., Kiessling, L.L., Forest, K.T.
PDB entry 6d9e: Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GlcNAc (open, reduced)
Classification: ISOMERASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2018-04-28
Authors: Wangkanont, K., Kiessling, L.L., Forest, K.T.
PDB entry 6d9f: Protein 60 with aldehyde deformylating oxidase activity from Kitasatospora setae
Classification: LYASE
Source organism: Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2018-04-28
Authors: Arenas, R., Wilson, D.K., Mak, W.S., Siegel, J.B.
PDB entry 6d9g: X-ray Structure of the FAB Fragment of 15B8, a Murine Monoclonal Antibody Specific for the Human Serotonin Transporter
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-04-29
Authors: Coleman, J.A., Yang, D., Gouaux, E.
PDB entry 6d9h: Cryo-EM structure of the human adenosine A1 receptor-Gi2-protein complex bound to its endogenous agonist
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2018-04-29
Authors: Draper-Joyce, C.J., Khoshouei, M., Thal, D.M., Liang, Y.-L., Nguyen, A.T.N., Furness, S.G.B., Venugopal, H., Baltos, J., Plitzko, J.M., Danev, R., Baumeister, W., May, L.T., Wootten, D., Sexton, P., Glukhova, A., Christopoulos, A.
PDB entry 6d9i: Pekin duck egg lysozyme isoform II (DEL-II)
Classification: HYDROLASE
Source organism: Anas platyrhynchos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2018-04-30
Authors: Langley, D.B., Christ, D.
PDB entry 6d9j: Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2018-04-30
Authors: Pisareva, V.P., Pisarev, A.V., Fernandez, I.S.
PDB entry 6d9k: Ternary RsAgo Complex with Guide RNA and Target DNA Containing A-G Non-canonical Pair
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-04-30
Authors: Liu, Y., Esyunina, D., Olovnikov, I., Teplova, M., Patel, D.J.
PDB entry 6d9l: Ternary RsAgo Complex with Guide RNA and Target DNA Containing G-A Non-canonical Pair
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-04-30
Authors: Liu, Y., Esyunina, D., Olovnikov, I., Teplova, M., Patel, D.J.
PDB entry 6d9m: T4-Lysozyme fusion to Geobacter GGDEF
Classification: HYDROLASE
Source organism: Enterobacteria phage T4; Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2018-04-30
Authors: Hallberg, Z., Doxzen, K., Kranzusch, P.J., Hammond, M.
PDB entry 6d9n: Crystal structure of an organic hydroperoxide resistance protein from Elizabethkingia anophelis with crystallant-derived thiocyanate bound
Classification: OXIDOREDUCTASE
Source organism: Elizabethkingia anophelis NUHP1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2018-04-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6d9o: NMR solution structure of tamapin, mutant E25A
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-30
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d9p: NMR solution structure of tamapin, mutant K27A
Classification: TOXIN
Source organism: Mesobuthus tamulus
Experimental method: SOLUTION NMR
Deposited: 2018-04-30
Authors: del Rio Portilla, F., Melchor Meneses, C.M., Titaux Delgado, G.A., Mayorga Flores, M.
PDB entry 6d9q: The sulfate-bound crystal structure of HPRT (hypoxanthine phosphoribosyltransferase)
Classification: TRANSFERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.056 Å
Deposited: 2018-04-30
Authors: Satyshur, K.A., Dubiel, K., Anderson, B., Wolak, C., Keck, J.L.
PDB entry 6d9r: The substrate-bound crystal structure of HPRT (hypoxanthine phosphoribosyltransferase)
Classification: TRANSFERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2018-04-30
Authors: Satyshur, K.A., Wolak, C., Anderson, B., Dubiel, K., Keck, J.L.
PDB entry 6d9s: The (p)ppGpp-bound crystal structure of HPRT (hypoxanthine phosphoribosyltransferase)
Classification: TRANSFERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.105 Å
Deposited: 2018-04-30
Authors: Satyshur, K.A., Dubiel, K., Anderson, B., Wolak, C., Keck, J.L.
PDB entry 6d9t: BshA from Staphylococcus aureus complexed with UDP
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-04-30
Authors: Royer, C.R., Cook, P.D.
PDB entry 6d9w: Crystal structure of Deinococcus radiodurans MntH, an Nramp-family transition metal transporter, in the inward-open apo state
Classification: TRANSPORT PROTEIN
Source organism: Deinococcus radiodurans; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.941 Å
Deposited: 2018-04-30
Authors: Gaudet, R., Bane, L.B., Weihofen, W.A., Singharoy, A., Zimanyi, C.M., Bozzi, A.T.
PDB entry 6d9x: Discovery of Potent 2-Aryl-6,7-Dihydro-5HPyrrolo[ 1,2-a]imidazoles as WDR5 WIN-site Inhibitors Using Fragment-Based Methods and Structure-Based Design
Classification: dna binding protein/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-04-30
Authors: Phan, J., Fesik, S.W.
PDB entry 6d9y: Crystal structure of a short chain dehydrogenase/reductase SDR from Burkholderia phymatum with partially occupied NAD
Classification: OXIDOREDUCTASE
Source organism: Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2018-04-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6d9z: Structure of CysZ, a sulfate permease from Pseudomonas Denitrificans
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas denitrificans (nomen rejiciendum)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.40213 Å
Deposited: 2018-04-30
Authors: Sanghai, Z.A., Clarke, O.B., Liu, Q., Banerjee, S., Rajashankar, K.R., Hendrickson, W.A., Mancia, F.
PDB entry 6da0: Crystal structure of glucokinase (NfHK) from Naegleria fowleri
Classification: TRANSFERASE
Source organism: Naegleria fowleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-05-01
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6da1: ETS1 in complex with synthetic SRR mimic
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.00013 Å
Deposited: 2018-05-01
Authors: Perez-Borrajero, C., Okon, M., Lin, C.S., Scheu, K., Murphy, M.E.P., Graves, B.J., McIntosh, L.P.
PDB entry 6da2: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6da3: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6da4: JAK3 with Cyanamide CP10
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-05-01
Authors: Vajdos, F.F.
PDB entry 6da5: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6da6: Crystal structure of the TtnD decarboxylase from the tautomycetin biosynthesis pathway of Streptomyces griseochromogenes, apo form at 2.6 A resolution (P212121)
Classification: LYASE
Source organism: Streptomyces griseochromogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2018-05-01
Authors: Han, L., Rudolf, J.D., Chang, C.-Y., Miller, M.D., Soman, J., Phillips Jr., G.N., Shen, B., Enzyme Discovery for Natural Product Biosynthesis (NatPro)
PDB entry 6da7: Crystal structure of the TtnD decarboxylase from the tautomycetin biosynthesis pathway of Streptomyces griseochromogenes with apo form at 1.83 A resolution (I222)
Classification: LYASE
Source organism: Streptomyces griseochromogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-05-01
Authors: Han, L., Rudolf, J.D., Chang, C.-Y., Miller, M.D., Soman, J., Phillips Jr., G.N., Shen, B., Enzyme Discovery for Natural Product Biosynthesis (NatPro)
PDB entry 6da8: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.802 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6da9: Crystal structure of the TtnD decarboxylase from the tautomycetin biosynthesis pathway of Streptomyces griseochromogenes with FMN bound at 2.05 A resolution
Classification: LYASE
Source organism: Streptomyces griseochromogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-05-01
Authors: Han, L., Rudolf, J.D., Chang, C.-Y., Miller, M.D., Soman, J., Xu, W., Phillips Jr., G.N., Shen, B., Enzyme Discovery for Natural Product Biosynthesis (NatPro)
PDB entry 6daa: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6dab: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6dac: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6dad: 1.65 Angstrom crystal structure of the N97I Ca/CaM:CaV1.2 IQ domain complex
Classification: CALCIUM BINDING PROTEIN/MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2018-05-01
Authors: Wang, K., Van Petegem, F.
PDB entry 6dae: 2.0 Angstrom crystal structure of the D95V Ca/CaM:CaV1.2 IQ domain complex
Classification: CALCIUM BINDING PROTEIN/MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-05-01
Authors: Wang, K., Lu, J., Van Petegem, F.
PDB entry 6daf: 2.4 Angstrom crystal structure of the F141L Ca/CaM:CaV1.2 IQ domain complex
Classification: CALCIUM BINDING PROTEIN/MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2018-05-01
Authors: Wang, K., Van Petegem, F.
PDB entry 6dag: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6dah: 2.5 Angstrom crystal structure of the N97S CaM mutant
Classification: CALCIUM BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.502 Å
Deposited: 2018-05-01
Authors: Wang, K., Van Petegem, F.
PDB entry 6dai: Discovery of Potent 2-Aryl-6,7-Dihydro-5HPyrrolo[ 1,2-a]imidazoles as WDR5 WIN-site Inhibitors Using Fragment-Based Methods and Structure-Based Design
Classification: dna binding protein/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2018-05-01
Authors: Phan, J., Fesik, S.W.
PDB entry 6daj: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6dak: Discovery of Potent 2-Aryl-6,7-Dihydro-5HPyrrolo[ 1,2-a]imidazoles as WDR5 WIN-site Inhibitors Using Fragment-Based Methods and Structure-Based Design
Classification: dna binding protein/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-05-01
Authors: Phan, J., Fesik, S.W.
PDB entry 6dal: Human CYP3A4 bound to an inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2018-05-01
Authors: Sevrioukova, I.F.
PDB entry 6dam: Crystal structure of lanthanide-dependent methanol dehydrogenase XoxF from Methylomicrobium buryatense 5G
Classification: OXIDOREDUCTASE
Source organism: Methylomicrobium buryatense 5G
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-05-01
Authors: Deng, Y., Ro, S.Y., Rosenzweig, A.C.
PDB entry 6dan: PhdJ WT 2 Angstroms resolution
Classification: LYASE
Source organism: Mycobacterium vanbaalenii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.047 Å
Deposited: 2018-05-01
Authors: Medellin, B.P., LeVieux, J.A., Zhang, Y.J., Whitman, C.P.
PDB entry 6dao: NahE WT selenomethionine
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.939 Å
Deposited: 2018-05-01
Authors: Medellin, B.P., LeVieux, J.A., Zhang, Y.J., Whitman, C.P.
PDB entry 6daq: PhdJ bound to substrate intermediate
Classification: LYASE
Source organism: Mycobacterium vanbaalenii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-05-01
Authors: Medellin, B.P., LeVieux, J.A., Zhang, Y.J., Whitman, C.P.
PDB entry 6dar: Discovery of Potent 2-Aryl-6,7-Dihydro-5HPyrrolo[ 1,2-a]imidazoles as WDR5 WIN-site Inhibitors Using Fragment-Based Methods and Structure-Based Design
Classification: dna binding protein/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2018-05-01
Authors: Phan, J., Fesik, S.W.
PDB entry 6das: Discovery of Potent 2-Aryl-6,7-Dihydro-5HPyrrolo[ 1,2-a]imidazoles as WDR5 WIN-site Inhibitors Using Fragment-Based Methods and Structure-Based Design
Classification: dna binding protein/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-05-01
Authors: Phan, J., Fesik, S.W.
PDB entry 6dat: ETS1 in complex with synthetic SRR mimic
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35003 Å
Deposited: 2018-05-02
Authors: Perez-Borrajero, C., Okon, M., Lin, C.S., Scheu, K., Murphy, M.E.P., Graves, B.J., McIntosh, L.P.
PDB entry 6dau: Crystal structure of E33Q and E41Q mutant forms of the spermidine/spermine N-acetyltransferase SpeG from Vibrio cholerae
Classification: TRANSFERASE
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2018-05-02
Authors: Filippova, E.V., Minasov, G., Beahan, A., Kulyavtsev, P., Tan, L., Tran, D., Kuhn, M.L., Anderson, W.F., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6dav: Crystal Structure of Human DHFR complexed with NADP and N10formyltetrahydrofolate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-05-02
Authors: Mayclin, S.J., Dranow, D.M., Lorimer, D.D.
PDB entry 6daw: X-ray crystal structure of NapI L-arginine desaturase bound to Fe(II), L-arginine, and acetate
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lusitanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-05-02
Authors: Mitchell, A.J., Dunham, N.P., Boal, A.K.
PDB entry 6dax: X-ray crystal structure of VioC bound to Fe(II), L-homoarginine, and 2-oxoglutarate
Classification: OXIDOREDUCTASE
Source organism: Streptomyces vinaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-05-02
Authors: Dunham, N.P., Mitchell, A.J., Boal, A.K.
PDB entry 6day: Xanthomonas albilineans Dihydropteroate synthase with 4-aminobenzoic acid at 1.65 A
Classification: TRANSFERASE
Source organism: Xanthomonas albilineans GPE PC73
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2018-05-02
Authors: Oliveira, A.A., Guido, R.V.C., Lima, G.M.A., Bueno, R.V., Maluf, F.V.
PDB entry 6daz: X-ray crystal structure of VioC bound to Fe(II), 3S-hydroxy-L-homoarginine, and succinate
Classification: OXIDOREDUCTASE
Source organism: Streptomyces vinaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2018-05-02
Authors: Dunham, N.P., Mitchell, A.J., Boal, A.K.
PDB entry 6db0: N-Terminal bromodomain of Human BRD2 with a Tetrahydroquinoline analogue
Classification: Transcription/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-05-02
Authors: White, S.W., Yun, M.
PDB entry 6db1: 2.0 Angstrom Resolution Crystal Structure of N-Terminal Ligand-Binding Domain of Putative Methyl-Accepting Chemotaxis Protein from Salmonella enterica
Classification: TRANSFERASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-05-02
Authors: Minasov, G., Shuvalova, L., Dubrovska, I., Kiryukhina, O., Grimshaw, S., Kwon, K., Anderson, W.F., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6db2: X-ray crystal structure of VioC bound to vanadyl ion, L-homoarginine, and succinate
Classification: OXIDOREDUCTASE
Source organism: Streptomyces vinaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-05-02
Authors: Dunham, N.P., Mitchell, A.J., Boal, A.K.
PDB entry 6db3: JAK3 with Cyanamide CP23
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2018-05-02
Authors: Vajdos, F.F.
PDB entry 6db4: JAK3 with Cyanamide CP34
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.662 Å
Deposited: 2018-05-02
Authors: Vajdos, F.F.
PDB entry 6db5: Crystal structure of anti-HIV-1 V3 Fab TA6 in complex with a HIV-1 gp120 V3 peptide from NY5 strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.599 Å
Deposited: 2018-05-02
Authors: Chan, K.-W., Kong, X.-P.
PDB entry 6db6: Crystal structure of anti-HIV-1 V3 Fab 311-11D in complex with a HIV-1 gp120 V3 peptide from MN strain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.978 Å
Deposited: 2018-05-02
Authors: Chan, K.-W., Kong, X.-P.