LiteFold/PDB huggingface dataset:
PDB entry 9jj6: BtHKU5-CoV-2-441 Spike RBD domain binding to hACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Pipistrellus bat coronavirus HKU5
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-09-13
Authors: Zhang, W., Peng, W., Chen, H.Y.
PDB entry 9jj7: The crystal structure of SARS-CoV-2 NSP5 in complex with eIF4G2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-09-13
Authors: Yan, X., Jin, Z., Wang, Y., Zhang, J.
PDB entry 9jj8: Structural insights into the PSI-FCPI supercomplex from the coccolithophore Emiliania huxleyi
Classification: PHOTOSYNTHESIS
Source organism: Emiliania huxleyi CCMP1516
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-09-13
Authors: Shen, L.L., Li, Z.H., Wang, W.D.
PDB entry 9jj9: Class 3 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Classification: LYASE
Source organism: Streptomyces graminofaciens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2024-09-13
Authors: Chisuga, T., Liao, Z., Adachi, N., Kawasaki, M., Moriya, T., Senda, T., Kudo, F., Eguchi, T., Miyanaga, A.
PDB entry 9jjb: Class 1 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain
Classification: LYASE
Source organism: Streptomyces graminofaciens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-09-13
Authors: Chisuga, T., Liao, Z., Adachi, N., Kawasaki, M., Moriya, T., Senda, T., Kudo, F., Eguchi, T., Miyanaga, A.
PDB entry 9jjd: Structural analysis of autophagy-related protein 8a in Drosophila melanogaster
Classification: LIPID TRANSPORT
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2024-09-13
Authors: Zhang, S.Q., Luo, X., Wu, D.X., Liu, J., Li, X.Y.
PDB entry 9jje: Nematostella vectensis TRPM2 tetramer in complex with ADPRP/Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Nematostella vectensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2024-09-13
Authors: Jiang, Y., Zhang, Z., Toth, B., Szollosi, A., Csanady, L.
PDB entry 9jjf: Nematostella vectensis TRPM2 protomer in complex with ADPRP/Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Nematostella vectensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-09-13
Authors: Jiang, Y., Zhang, Z., Toth, B., Szollosi, A., Csanady, L.
PDB entry 9jjg: Cryo-EM structure of RHDV GI.2 virion
Classification: VIRUS
Source organism: Rabbit hemorrhagic disease virus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2024-09-13
Authors: Ruan, Z., Shao, Q., Song, Y., Hu, B., Fan, Z., Wei, H., Liu, Y., Wang, F., Fang, Q.
PDB entry 9jjh: Cryo-EM structure of a T=1 VLP of RHDV GI.2 with N-terminal 1-37 residues truncated
Classification: VIRUS LIKE PARTICLE
Source organism: Rabbit hemorrhagic disease virus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-09-13
Authors: Ruan, Z., Shao, Q., Song, Y., Hu, B., Fan, Z., Wei, H., Liu, Y., Wang, F., Fang, Q.
PDB entry 9jji: Local refinement of RHDV GI.2 T=1 VLP
Classification: VIRAL PROTEIN
Source organism: Rabbit hemorrhagic disease virus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-09-13
Authors: Ruan, Z., Shao, Q., Song, Y., Hu, B., Fan, Z., Wei, H., Liu, Y., Wang, F., Fang, Q.
PDB entry 9jjj: Cryo-EM structure of a T=3 VLP of RHDV GI.2
Classification: VIRUS LIKE PARTICLE
Source organism: Rabbit hemorrhagic disease virus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-09-13
Authors: Ruan, Z., Shao, Q., Song, Y., Hu, B., Fan, Z., Wei, H., Liu, Y., Wang, F., Fang, Q.
PDB entry 9jjk: putative MgE1 of human TMEM94
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-09-14
Authors: Gong, D.S.
PDB entry 9jjn: putative MgE1-ATP of human TMEM94
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2024-09-14
Authors: Gong, D.S.
PDB entry 9jjo: putative MgE1P-ADP of human TMEM94
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2024-09-14
Authors: Gong, D.S.
PDB entry 9jjs: Crystal Structure of human Pin1 catalytic domain in complex with a covalent inhibitor
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2024-09-14
Authors: Wang, X.Y., Tian, M.Z., Zhou, J., Xu, B.L.
PDB entry 9jju: Truncated RNF112, nucleotide-free
Classification: HYDROLASE
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-09-14
Authors: Zhong, Y.T., Huang, L.L., Gao, S.
PDB entry 9jjv: Truncated RNF112, transition-like state
Classification: HYDROLASE
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-09-14
Authors: Zhong, Y.T., Huang, L.L., Gao, S.
PDB entry 9jjw: Truncated RNF112, GDP-bound form 1
Classification: HYDROLASE
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-09-14
Authors: Zhong, Y.T., Huang, L.L., Gao, S.
PDB entry 9jjx: Truncated RNF112, GDP-bound form 2
Classification: HYDROLASE
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2024-09-14
Authors: Zhong, Y.T., Huang, L.L., Gao, S.
PDB entry 9jjz: Crystal Structure of human Pin1 catalytic domain in complex with a covalent inhibitor
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-09-14
Authors: Wang, X.Y., Tian, M.Z., Zhou, J., Xu, B.L.
PDB entry 9jk1: Crystal structure of CDK12/Cyclin K in complex with covalent inhibitor YJZ5118
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2024-09-14
Authors: Huang, W.X., Zhang, P.J., Yang, J.Z., Ding, K.
PDB entry 9jk3: putative MgE2P of TMEM94
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-09-14
Authors: Gong, D.S.
PDB entry 9jk4: putative E2P of TMEM94
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-09-15
Authors: Gong, D.S.
PDB entry 9jk5: putative MgE1-ATP-H of TMEM94
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-09-15
Authors: Gong, D.S.
PDB entry 9jk6: Human VANGL1 hexamer
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-15
Authors: Song, Y., Zhang, Z., Jian, S., Zheng, P.
PDB entry 9jk7: Human VANGL2 hexamer
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-09-15
Authors: Song, Y., Zhang, Z., Jian, S., Zheng, P.
PDB entry 9jk8: Human VANGL1 in complex with PK1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-09-15
Authors: Song, Y., Zhang, Z., Jian, S., Zheng, P.
PDB entry 9jk9: Human VANGL1 in complex with a PK1 peptide (residues 745-790)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-09-15
Authors: Song, Y., Zhang, Z., Jian, S., Zheng, P.
PDB entry 9jka: Human VANGL2 in complex with a PK1 peptide (residues 745-790)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-09-15
Authors: Song, Y., Zhang, Z., Jian, S., Zheng, P.
PDB entry 9jkb: Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO4 SCF ubiquition ligase complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2024-09-15
Authors: Zhu, W., Xu, C.
PDB entry 9jkc: Crystal structure of Aspergillus fumigatus polymycovirus 1 ploymerase (residues 85-763) in its apo state
Classification: VIRAL PROTEIN
Source organism: Aspergillus fumigatus tetramycovirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2024-09-15
Authors: Jia, H., Cao, S., Gong, P.
PDB entry 9jkd: Crystal structure of Aspergillus fumigatus polymycovirus 1 ploymerase elongation complex
Classification: VIRAL PROTEIN/RNA
Source organism: Aspergillus fumigatus tetramycovirus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-09-15
Authors: Jia, H., Gong, P.
PDB entry 9jke: The cryo-EM structure of Ac-K58W_G51DA53T P2 a-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-09-15
Authors: Zhao, Q.Y., Tao, Y.Q., Liu, C., Li, D.
PDB entry 9jkf: Asymmetric structure of cleaved HIV-1 Tri FPPR envelope glycoprotein trimer in amphipol-lipid nanodiscs (Tri FPPR.1)
Classification: VIRAL PROTEIN
Source organism: Simian-Human immunodeficiency virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-09-16
Authors: Qi, Y., Zhang, S., Sodroski, J., Mao, Y.
PDB entry 9jkg: Asymmetric structure of cleaved HIV-1 Tri FPPR envelope glycoprotein trimer in amphipol-lipid nanodiscs (Tri FPPR.2)
Classification: VIRAL PROTEIN
Source organism: Simian-Human immunodeficiency virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-09-16
Authors: Qi, Y., Zhang, S., Sodroski, J., Mao, Y.
PDB entry 9jkh: SLC6A3 apo
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-09-16
Authors: Zhang, S.S.
PDB entry 9jki: membrane protein SLC6A3 with Bpp
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2024-09-16
Authors: Zhang, S.S.
PDB entry 9jkj: membrane transporter SLC6A3 dopamine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2024-09-16
Authors: Zhang, S.S.
PDB entry 9jkk: membrane transporter SLC6A3 KCl
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-16
Authors: Zhang, S.S.
PDB entry 9jkl: LYSYL-TRNA SYNTHETASE(LysRS) COMPLEXED WITH LYSINE
Classification: LIGASE
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-09-16
Authors: Jani, J., Mochi, J., Shah, S., Das, A., Patel, D., Pananghat, G., Pappachan, A.
PDB entry 9jkm: membrane transporter SLC6A3 VXN
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-09-16
Authors: Zhang, S.S.
PDB entry 9jko: Crystal structure of the RNA- binding domain of human ZAR1
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2024-09-16
Authors: Liu, Q.L., Xu, C.
PDB entry 9jkp: Crystal structure of the Staphylococcus aureus GTPase Era in complex with GDP
Classification: RNA BINDING PROTEIN
Source organism: Staphylococcus aureus (strain NCTC 8325 / PS 47)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2024-09-16
Authors: Klochkova, E., Biktimirov, A., Islamov, D., Belousov, A., Yusupov, M., Usachev, K.
PDB entry 9jkq: Cryo-EM structure of the METH-bound hTAAR1-Gs complex
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2024-09-16
Authors: Lin, Y., Wang, J., Shi, F.
PDB entry 9jkr: human GM-CSF with Fabs from autoantibodies, F1 and C.
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-09-17
Authors: Kishikawa, J., Kato, T., Kurosaki, T., Inoue, T.
PDB entry 9jks: 6O-HCAR3-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-09-17
Authors: Binghao, Z., Fang, Y.
PDB entry 9jkt: PLA-HCAR3-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-09-17
Authors: Binghao, Z., Fang, Y.
PDB entry 9jku: Crystal Structure of 5'-Deoxy-5'-methylthioadenosine phosphorylase from Aeropyrum pernix complex with 5'-Deoxy-5'-methylthioadenosine 333K
Classification: TRANSFERASE
Source organism: Aeropyrum pernix K1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-09-17
Authors: Iizuka, Y., Kikuchi, M., Yamauchi, T., Tsunoda, M.
PDB entry 9jkv: IBC-HCAR3-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2024-09-17
Authors: Binghao, Z., Fang, Y.
PDB entry 9jkw: CYP105A1 R84A complexed with mevastatin
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-09-17
Authors: Mikami, B., Takita, T., Sakaki, T., Yasuda, K., Yasukawa, K., Yoneda, S., Yamagata, M.
PDB entry 9jkx: acifran-HCAR3-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-09-17
Authors: Binghao, Z., Fang, Y.
PDB entry 9jky: acifran-HCAR2-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2024-09-17
Authors: Binghao, Z., Fang, Y.
PDB entry 9jkz: CYP105A1 R84A complexed with simvastatin
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-09-17
Authors: Mikami, B., Takita, T., Sakaki, T., Yasuda, K., Yasukawa, K., Yoneda, S., Yamagata, M.
PDB entry 9jl0: Crystal structure of feline CD8aa homodimer
Classification: IMMUNE SYSTEM
Source organism: Felis catus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-09-17
Authors: Li, Z., Liang, R.
PDB entry 9jl1: SpCas9 with mini-gRNA conformation
Classification: RNA BINDING PROTEIN
Source organism: Streptococcus pyogenes serotype M1; unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-09-17
Authors: Xi, Z.
PDB entry 9jl2: Classical conformation for the spCas9 with gRNA and target DNA complex
Classification: RNA BINDING PROTEIN
Source organism: Streptococcus pyogenes serotype M1; unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-17
Authors: Xi, Z.
PDB entry 9jl3: Cryo-EM structure of DRT2-RT-ncRNA binary complex
Classification: ANTIVIRAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-09-17
Authors: Zhang, H., Zhang, S.
PDB entry 9jl4: Apo-spCas9 conformation
Classification: RNA BINDING PROTEIN
Source organism: Streptococcus pyogenes serotype M1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-09-17
Authors: Xi, Z.
PDB entry 9jl5: CYP105A1 R84A complexed with mevastatin (cryogenic data collection)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-09-18
Authors: Mikami, B., Takita, T., Sakaki, T., Yasuda, K., Yasukawa, K., Yoneda, S., Yamagata, M.
PDB entry 9jl6: Cryo-EM structure of chalcone synthase (CHS) from Physcomitrella patens in the presence of CHIL
Classification: TRANSFERASE
Source organism: Physcomitrium patens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.18 Å
Deposited: 2024-09-18
Authors: Sato, K., Yokoyama, T., Tanaka, Y., Imaizumi, R., Yasuda, A., Yanai, T., Yamashita, S., Waki, T., Tsunashima, M., Nakayama, T.
PDB entry 9jl7: Crystal structure of Actinomycin D-Doxorubicin-d(AGCCGT)2 DNA ternary complex
Classification: DNA/ANTIBIOTIC
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2024-09-18
Authors: Li, H.J., Satange, R.B., Hou, M.H.
PDB entry 9jl8: De novo designed GPX4 2OBI-1
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2024-09-18
Authors: Liu, J.L., Guo, Z., Lai, L.H.
PDB entry 9jl9: De novo designed GPX4 2OBI-3
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2024-09-18
Authors: Guo, Z., Liu, J.L., Lai, L.H.
PDB entry 9jla: De novo designed GPX4 2OBI-10
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2024-09-18
Authors: Guo, Z., Lai, L.H.
PDB entry 9jlb: Cryo-EM structure of phyB-PIF6beta complex
Classification: GENE REGULATION
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-18
Authors: Jia, H.L., Guan, Z.Y., Ding, J.Y., Wang, X.Y., Ma, L., Yin, P.
PDB entry 9jlc: Cryo-EM structure of MAS1-Gi Complex with AVE 0991
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-09-18
Authors: Wong, T.S., Xiong, T.T., Zeng, Z.C., Gan, S.Y., Du, Y.
PDB entry 9jlf: Cryo-EM Structure of Bacteriophage FCWL1 head-to-tail interface
Classification: VIRAL PROTEIN
Source organism: Escherichia phage FCWL1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-09-18
Authors: Cai, C., Wang, Y., Liu, Y., Shao, Q., Wang, A., Fang, Q.
PDB entry 9jlh: STRUCTURE OF MUTANT3 OF UNSPECIFIC PEROXYGENASE FROM AGROCYBE AEGERITA
Classification: OXIDOREDUCTASE
Source organism: Cyclocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-09-19
Authors: Zhang, J., Huang, Y.W., Cheng, Y.Y., Liu, W.D., Zhang, W.Y.
PDB entry 9jli: Structure of HHV6B glycoprotein B
Classification: VIRAL PROTEIN
Source organism: Human herpesvirus 6 strain Z29
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-09-19
Authors: Fang, X.Y., Xie, C., Sun, C., Zeng, M.S., Liu, Z.
PDB entry 9jlk: NADP-dependent oxidoreductase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Lysobacter enzymogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2024-09-19
Authors: Li, Y., Zhu, D., Xie, X., Li, F., Lu, M.
PDB entry 9jlm: Crystal structure of aldolase AtoB 1.9A
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aspergillus ochraceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-09-19
Authors: Ma, K., Fan, A., Lin, W.
PDB entry 9jln: Cryo-EM structure of human TauT in presence of taurine, observed only one sodium ion, determined in an inward-occluded conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-09-19
Authors: Qu, Q., Chao, Y., Zhou, Z.
PDB entry 9jlo: Crystal structure L-lactate dehydrogenase from Lactobacillus reuteri in its apoform
Classification: OXIDOREDUCTASE
Source organism: Limosilactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-09-19
Authors: Matyuta, I.O., Minyaev, M.E., Shirokova, A.A., Pometun, A.A., Tishkov, V.I., Popov, V.O., Boyko, K.M.
PDB entry 9jlp: Cryo-EM structure of Full particle of prokaryotic dsRNA virus phiYY
Classification: VIRUS
Source organism: Pseudomonas phage phiYY
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-09-19
Authors: Meng, K.W., Cui, C.X., Huyan, Y.N., Meng, G.
PDB entry 9jlq: Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus wild type apo
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-09-19
Authors: Zhu, Z.M., Wang, W.W., Yu, F., Wang, Q.S.
PDB entry 9jlr: Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant E256Q in complex with maltopentaose
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2024-09-19
Authors: Zhu, Z.M., Wang, W.W., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S., Yu, F.
PDB entry 9jls: Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus wild type in complex with acarbose
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2024-09-19
Authors: Zhu, Z.M., Wang, W.W., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S., Yu, F.
PDB entry 9jlt: GH57 family amylopullulanase D352N mutant from Aquifex aeolicus complex with alpha-cyclodextrin
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-09-19
Authors: Zhu, Z.M., Wang, W.W., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S., Yu, F.
PDB entry 9jlu: GH57 family amylopullulanase from Aquifex aeolicus D352N mutant complex with beta-cyclodextrin
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-09-19
Authors: Zhu, Z.M., Wang, W.W., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S., Yu, F.
PDB entry 9jlv: Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant E256Q in complex with alpha-cyclodextrin
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2024-09-19
Authors: Zhu, Z.M., Wang, W.W., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S., Yu, F.
PDB entry 9jlw: Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant D352N in complex with maltoheptaose
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-09-19
Authors: Zhu, Z.M., Wang, W.W., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S., Yu, F.
PDB entry 9jlx: Crystal structure of GH57 family amylopullulanase from Aquifex aeolicus mutant D352N in complex with maltoheptaose
Classification: HYDROLASE
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-09-19
Authors: Zhu, Z.M., Wang, W.W., Li, M.J., Xu, Q., Zhou, H., Huang, L.Q., Wang, Q.S., Yu, F.
PDB entry 9jly: NADP-dependent oxidoreductase complexed with NADP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Lysobacter enzymogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2024-09-19
Authors: Li, Y., Zhu, D., Xie, X., Li, F., Lu, M.
PDB entry 9jlz: High resolution crystal structure of GH1 beta-glucosidase from soil metagenome (UnBGl1)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2024-09-20
Authors: Suryawanshi, A.B., Bhaumik, P.
PDB entry 9jm0: retron Ec86-effector fiber
Classification: RNA BINDING PROTEIN/DNA/RNA
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-09-20
Authors: Wang, Y.J., Guan, Z.Y., Wang, C., Zou, T.T.
PDB entry 9jm1: Crystal structure of de novo designed light-responsive oligomer C2-5 (LRO-C2-5)
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-09-20
Authors: Yu, B., Cao, L.
PDB entry 9jm2: Crystal structure of de novo designed light-responsive oligomer C2-35 (LRO-C2-35) at acidic pH (pH 4.5)
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-20
Authors: Yu, B., Cao, L.
PDB entry 9jm3: Crystal structure of de novo designed light-responsive oligomer C2-35 (LRO-C2-35) at basic pH (pH 8.5)
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-09-20
Authors: Yu, B., Cao, L.
PDB entry 9jm4: Crystal structure of de novo designed light-responsive oligomer C3-7 (LRO-C3-7)
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-09-20
Authors: Yu, B., Cao, L.
PDB entry 9jm5: Crystal structure of de novo designed light-responsive oligomer C4-13 (LRO-C4-13)
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-20
Authors: Yu, B., Liu, J., Cao, L.
PDB entry 9jm6: Crystal structure of de novo designed light-responsive oligomer C5-1 (LRO-C5-1)
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-09-20
Authors: Yu, B., Cao, L.
PDB entry 9jm7: Crystal structure of de novo designed light-responsive heterodimer 2 (LRD-2)
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2024-09-20
Authors: Yu, B., Liu, J., Cao, L.
PDB entry 9jm8: Crystal structure of de novo designed light-responsive heterodimer 7 (LRD-7)
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-09-20
Authors: Yu, B., Cao, L.
PDB entry 9jm9: NADP-dependent oxidoreductase complexed with NADP and substrate 3
Classification: BIOSYNTHETIC PROTEIN
Source organism: Lysobacter enzymogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 3.38 Å
Deposited: 2024-09-20
Authors: Li, Y., Zhu, D., Xie, X., Li, F., Lu, M.
PDB entry 9jma: Crystal structure of glycosyltransferase AvpGT
Classification: TRANSFERASE
Source organism: Streptomyces sp. AVP053U2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-20
Authors: Li, J.H., Wang, Z.Q., Zhang, Z.Y., Chen, W.Q.
PDB entry 9jmb: Cryo-EM structure of HSV-2 gB and FAB 16F9 complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human herpesvirus 2; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.18 Å
Deposited: 2024-09-20
Authors: Li, Y., Zheng, Q., Li, S.
PDB entry 9jmc: Cryo-EM structure of the DS-3801b-Motilin receptor-Gq protein complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.57 Å
Deposited: 2024-09-20
Authors: Xu, H.E., You, C., Jiang, Y.
PDB entry 9jmd: Cryo-EM structure of the Azithromycin-Motilin receptor-Gq protein complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2024-09-20
Authors: Xu, H.E., You, C., Jiang, Y.
PDB entry 9jme: Cryo-EM structure of BV gB and FAB 16F9 complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Cercopithecine herpesvirus 1; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.18 Å
Deposited: 2024-09-20
Authors: Li, Y., Zheng, Q., Li, S.
PDB entry 9jmf: Cryo-EM structure of SA-BatCoV (Neoromicia/PML-PHE1/RSA/2011) S-trimer
Classification: VIRAL PROTEIN
Source organism: Coronavirus Neoromicia/PML-PHE1/RSA/2011; Enterobacteria phage T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-09-20
Authors: Yuan, H., Xiong, X.
PDB entry 9jmg: Cryo-EM structure of EU-HedgehogCoV (Erinaceus/VMC/DEU/2012) S-trimer in a locked-2 conformation
Classification: VIRAL PROTEIN
Source organism: Betacoronavirus Erinaceus/VMC/DEU/2012; Enterobacteria phage T4 (Bacteriophage T4)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-20
Authors: Yuan, H., Xiong, X.
PDB entry 9jmh: Cryo-EM structure of HKU25-BatCoV S-trimer stabilized with 2P and x1 disulfide bond
Classification: VIRAL PROTEIN
Source organism: Hypsugo bat coronavirus HKU25; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-20
Authors: Yuan, H., Xiong, X.
PDB entry 9jmi: Cryo-EM structure of CN-HedgehogCoV (HKU31/Erinaceus amurensis/China/2014) S-trimer in a locked-2 conformation
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Erinaceus hedgehog coronavirus HKU31
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-09-20
Authors: Yuan, H., Xiong, X.
PDB entry 9jmj: Cryo-EM structure of the GD-BatCoV (BtCoV/Ii/GD/2014-422) RBD in complex with human DPP4
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Middle East respiratory syndrome-related coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-09-20
Authors: Yuan, H., Xiong, X.
PDB entry 9jmk: 50S Ribosomal Subunit precursor state III
Classification: RIBOSOME
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-09-20
Authors: Sengupta, S., Mukherjee, R., Pilsl, M., Bagale, S., Adhikary, A.D., Borkar, A., Pradeepkumar, P.I., Engel, C., Chowdhury, A., Kaushal, P.S., Anand, R.
PDB entry 9jml: NADP-dependent oxidoreductase complexed with NADP and substrate 1
Classification: BIOSYNTHETIC PROTEIN
Source organism: Lysobacter enzymogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-09-20
Authors: Li, Y., Zhu, D., Xie, X., Li, F., Lu, M.
PDB entry 9jmm: Cryo-EM structure of the SE-PangolinCoV (MjHKU4r-CoV-1) RBD in complex with human DPP4
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Pangolin coronavirus HKU4/P251T/pangolin/2018
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-09-20
Authors: Yuan, H., Xiong, X.
PDB entry 9jmn: Cryo-EM structure of CN-HedgehogCoV (HKU31/Erinaceus amurensis/China/2014) S-trimer in a locked-1 conformation
Classification: VIRAL PROTEIN
Source organism: Erinaceus hedgehog coronavirus HKU31; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-09-20
Authors: Yuan, H., Xiong, X.
PDB entry 9jmo: Cryo-EM structure of Japan-BatCoV (Vs-CoV-1) S-trimer
Classification: VIRAL PROTEIN
Source organism: Bat coronavirus; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-09-20
Authors: Yuan, H., Xiong, X.
PDB entry 9jmp: Cryo-EM structure of GD-BatCoV (BtCoV/Ii/GD/2014-422) S-trimer
Classification: VIRAL PROTEIN
Source organism: Middle East respiratory syndrome-related coronavirus; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-09-20
Authors: Yuan, H., Xiong, X., Gao, X., Li, Z., Wang, J.
PDB entry 9jmr: Cryo-EM structure of PRV gB and FAB 16f9 complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Suid alphaherpesvirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-09-21
Authors: Li, Y., Zheng, Q., Li, S.
PDB entry 9jms: Cryo-EM structure of VZV gB and FAB 16F9 complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human herpesvirus 3; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2024-09-21
Authors: Li, Y., Zheng, Q., Li, S.
PDB entry 9jmt: DRB3 dsRBD1 (i.e., DRB3(1-75))
Classification: RNA BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 2024-09-21
Authors: Paul, J., Deshmukh, M.V.
PDB entry 9jmu: Solution structure of DRB3 dsRBD2 (i.e. DRB3 (83-185))
Classification: RNA BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 2024-09-21
Authors: Paul, J., Deshmukh, M.V.
PDB entry 9jmx: Crystal structure of IRED-M235A in complex with NADP+ and substrate
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis thermoflava
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-09-21
Authors: Fu, X.L., Zhang, M.T., Yi, S.M., Dai, K.X., Yang, Y.Y., Chen, C.-C., Guo, R.-T.
PDB entry 9jmy: Crystal structure of IRED in complex with NADPH
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis thermoflava
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-09-22
Authors: Fu, X.L., Zhang, M.T., Yi, S.M., Dai, K.X., Yang, Y.Y., Chen, C.-C., Guo, R.-T.
PDB entry 9jmz: Cryo-EM structure of a human-infecting bovine influenza H5N1 hemagglutinin complexed with avian receptor analog LSTa
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Indonesia/5/2005(H5N1))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2024-09-22
Authors: Wang, H.C., Han, P., Song, H., Gao, G.F.
PDB entry 9jn0: Cryo-EM structure of a human-infecting bovine influenza H5N1 hemagglutinin complexed with human receptor analog LSTc
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Indonesia/5/2005(H5N1))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-09-22
Authors: Wang, H.C., Han, P., Song, H., Gao, G.F.
PDB entry 9jn1: apo Multidrug resistance-associated protein 2 in complex with AMP-PNP in rest state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2024-09-22
Authors: Chen, D.D., Zhao, P.
PDB entry 9jn2: Multidrug resistance-associated protein 2 in complex with AMP-PNP in active state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-09-22
Authors: Chen, D.D., Zhao, P.
PDB entry 9jn3: Crystal structure of AvpGT in complex with Ara-A
Classification: TRANSFERASE
Source organism: Streptomyces sp. AVP053U2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-09-22
Authors: Li, J.H., Wang, Z.Q., Zhang, Z.Y., Chen, W.Q.
PDB entry 9jn4: Crystal structure of KtzT-C197A in complex with HEME
Classification: OXIDOREDUCTASE
Source organism: Kutzneria sp. 744
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-09-22
Authors: Li, Y.L., Yang, Y.Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9jn5: Crystal structure of KtzT-C197A in complex with HEME and substrate
Classification: OXIDOREDUCTASE
Source organism: Kutzneria sp. 744
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-22
Authors: Li, Y.L., Yang, Y.Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9jn6: Crystal structure of KtzT-C197A in complex with HEME and product
Classification: OXIDOREDUCTASE
Source organism: Kutzneria sp. 744
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-09-22
Authors: Li, Y.L., Yang, Y.Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9jn8: Crystal structure of a thioredoxin-like ferredoxin of Rhodobacter capsulatus
Classification: ELECTRON TRANSPORT
Source organism: Rhodobacter capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2024-09-22
Authors: Shen, Y., Liu, L.
PDB entry 9jn9: Cryo-EM structure of human SLFN14
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-09-23
Authors: Luo, M., Jia, X.D., Wang, Z.W., Yang, J.Y., Zhang, Q.F., Gao, S.
PDB entry 9jna: Crystal Structure of SME-1 E166A mutant in complex with Meropenem
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-09-23
Authors: Dhankhar, K., Hazra, S.
PDB entry 9jnb: Crystal Structure of SME-1 E166A mutant in complex with imipenem
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-23
Authors: Dhankhar, K., Hazra, S.
PDB entry 9jnc: Crystal Structure of SME-1 with improved electron density
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2024-09-23
Authors: Dhankhar, K., Hazra, S.
PDB entry 9jnd: Crystal Structure of SME-1 E166A mutant
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-09-23
Authors: Dhankhar, K., Hazra, S.
PDB entry 9jne: Crystal Structure of SME-1 E166A mutant in complex with Doripenem
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-09-23
Authors: Dhankhar, K., Hazra, S.
PDB entry 9jnf: Crystal Structure of SME-1 E166A mutant in complex with Ertapenem
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2024-09-23
Authors: Dhankhar, K., Hazra, S.
PDB entry 9jng: Crystal Structure of SME-1 E166A mutant with Tebipenem
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-09-23
Authors: Dhankhar, K., Hazra, S.
PDB entry 9jni: KCMF1 Zn-coordinating domains with RCKG peptide (Sulfonic Cysteine)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2024-09-23
Authors: Yang, W.S., Shin, J.S., Song, H.K.
PDB entry 9jnj: Crystal structure of Human Cnot9
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-23
Authors: Yang, K.L.
PDB entry 9jnk: Bacteriophage T4 topoisomerse II bound with a T-segment DNA
Classification: ISOMERASE/DNA
Source organism: Escherichia phage T4; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2024-09-23
Authors: Xin, Y.H., Chen, Y.T.
PDB entry 9jnl: Human MEX3B CBM 26-50aa peptide bound to human CNOT9
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-09-23
Authors: Yang, K.L., Zhang, L.
PDB entry 9jnm: Human MEX3B CBM 26-46aa peptide bound to human CNOT9
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-23
Authors: Yang, K.L.
PDB entry 9jnn: Structure of native di-heteromeric GluN1-GluN2B NMDA receptor in rat cortex and hippocampus
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.4 Å
Deposited: 2024-09-23
Authors: Zhang, M., Feng, J., Li, Y., Zhu, S.
PDB entry 9jno: The complex structure of antibody CH76 bound to the hemagglutinin of influenza B virus
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza B virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-09-23
Authors: Ge, J.W., Fan, M., Zhao, M.
PDB entry 9jnp: Structure of isw1-nucleosome complex in ATP state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae S288C; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-09-23
Authors: Sia, Y., Pan, H., Chen, Z.
PDB entry 9jnq: dehydrogenase McyI
Classification: TOXIN
Source organism: Microcystis aeruginosa PCC 7806
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-09-23
Authors: Xue, C., Wang, Q.
PDB entry 9jnr: McyI-MCLR co-crystal
Classification: STRUCTURAL PROTEIN
Source organism: Microcystis aeruginosa PCC 7806
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2024-09-23
Authors: Wang, Q., Xue, C.
PDB entry 9jns: 50S precursor - Erm complex (C-II)
Classification: RIBOSOME
Source organism: Bacillus subtilis; Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2024-09-23
Authors: Sengupta, S., Mukherjee, R., Pilsl, M., Bagale, S., Adhikary, A.D., Borkar, A., Pradeepkumar, P.I., Engel, C., Chowdhury, A., Kaushal, P.S., Anand, R.
PDB entry 9jnt: Structure of isw1-nucleosome complex in ADP* state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae S288C; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-09-24
Authors: Sia, Y., Pan, H., Chen, Z.
PDB entry 9jnu: Structure of isw1-nucleosome complex in ADP state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae S288C; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-09-24
Authors: Sia, Y., Pan, H., Chen, Z.
PDB entry 9jnv: Structure of isw1-nucleosome complex in ADP(S) state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae S288C; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-24
Authors: Sia, Y., Pan, H., Chen, Z.
PDB entry 9jnw: Structure of isw1-nucleosome complex in ADP+ state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae S288C; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-09-24
Authors: Sia, Y., Pan, H., Chen, Z.
PDB entry 9jnx: Structure of isw1-nucleosome complex in ADP*+ state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae S288C; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-24
Authors: Sia, Y., Pan, H., Chen, Z.
PDB entry 9jny: C recatived protein pentamer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2024-09-24
Authors: Li, Y.J.
PDB entry 9jnz: Structure of isw1-nucleosome complex in Apo state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae S288C; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-24
Authors: Sia, Y., Pan, H., Chen, Z.
PDB entry 9jo0: Solution structure of free BLM promoter G-quadruplex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-09-24
Authors: Wang, K.B.
PDB entry 9jo1: NMR Solution structure of the 2:1 Berberine-BLM-G4 Complex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-09-24
Authors: Wang, K.B.
PDB entry 9jo2: Structure of isw1-nucleosome complex in Apo* state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae S288C; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-24
Authors: Sia, Y., Pan, H., Chen, Z.
PDB entry 9jo3: Cryo-EM structure of human BKca channel-compound 10b complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-09-24
Authors: Kim, S., Park, S., Lee, N.Y., Lee, E.Y., Lee, N., Roh, E.C., Kim, Y.G., Kim, H.J., Jin, M.S., Park, C.S., Kim, Y.C.
PDB entry 9jo4: Cryo-EM structure of human BKca channel-compound 51b complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-09-24
Authors: Kim, S., Park, S., Lee, N.Y., Lee, E.Y., Lee, N., Roh, E.C., Kim, Y.G., Kim, H.J., Jin, M.S., Park, C.S., Kim, Y.C.
PDB entry 9jo5: Structure of isw1-nucleosome complex in ADP-B state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae S288C; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-09-24
Authors: Sia, Y., Pan, H., Chen, Z.
PDB entry 9jo6: The complex of alpha-synuclein in the presence of PD6
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-09-24
Authors: Blasco, P., Li, X.
PDB entry 9jo7: CRP-HCAb4 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2024-09-24
Authors: Li, Y.J.
PDB entry 9jo8: Cryo-EM structure of the mono-DdCBE bound to a dsDNA substrate.
Classification: DNA BINDING PROTEIN/DNA
Source organism: Burkholderia cenocepacia H111; Xanthomonas; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-24
Authors: Jiangchao, X., Wenchao, X., Jia, C., Bei, Y.
PDB entry 9jo9: CRP-HCAb3 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-09-24
Authors: Li, Y.J.
PDB entry 9joa: PfDXR - Mn2+ - MAMK89 ternary complex
Classification: ISOMERASE
Source organism: Plasmodium falciparum HB3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-09-24
Authors: Takada, S., Sakamoto, Y., Tanaka, N.
PDB entry 9job: PfDXR - Mn2+ - NADPH - MAMK89 quaternary complex
Classification: ISOMERASE
Source organism: Plasmodium falciparum HB3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2024-09-24
Authors: Takada, S., Sakamoto, Y., Tanaka, N.
PDB entry 9joc: CRYSTAL STRUCTURE OF ENDO-1,3-FUCANASE (FUN168D) FROM GH168 FAMILY
Classification: HYDROLASE
Source organism: Wenyingzhuangia fucanilytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2024-09-24
Authors: Chen, G.N., Chang, Y.G.
PDB entry 9jod: Capsid structure of Escherichia phage Mu
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Mu
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-09-24
Authors: Zhou, J.Q., Liu, H.R.
PDB entry 9jof: COMPLEX STRUCTURE OF ENDO-1,3-FUCANASE (FUN168D) FROM GH168 FAMILY WITH FUCOTRIOSE
Classification: HYDROLASE
Source organism: Wenyingzhuangia fucanilytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-09-24
Authors: Chen, G.N., Chang, Y.G.
PDB entry 9jog: COMPLEX STRUCTURE OF ENDO-1,3-FUCANASE (FUN168D) WITH FUCOTETRAOSE FROM HOLOTHURIA TUBULOSA
Classification: HYDROLASE
Source organism: Wenyingzhuangia fucanilytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-09-24
Authors: Chen, G.N., Chang, Y.G.
PDB entry 9joh: COMPLEX STRUCTURE OF ENDO-1,3-FUCANASE (FUN168D) WITH FUCOTETRAOSE FROM ISOSTICHOPUS BADIONOTUS
Classification: HYDROLASE
Source organism: Wenyingzhuangia fucanilytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2024-09-24
Authors: Chen, G.N., Chang, Y.G.
PDB entry 9jom: STRUCTURE OF ENDO-1,3-FUCANASE FUN168E FROM GH168 FAMILY
Classification: HYDROLASE
Source organism: Wenyingzhuangia fucanilytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-09-25
Authors: Chen, G.N., Chang, Y.G.
PDB entry 9joo: COMPLEX STRUCTURE OF ENDO-1,3-FUCANASE (FUN168E) WITH FUCOTETRAOSES
Classification: HYDROLASE
Source organism: Wenyingzhuangia fucanilytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2024-09-25
Authors: Chen, G.N., Chang, Y.G.
PDB entry 9jop: Caseinolytic protease P from bacteria
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-09-25
Authors: Lu, M., Yin, J., Xiao, Y.
PDB entry 9joq: SDACS: A synergistic strategy using both crystallographic and AlphaFold structures to improve thermostability and activity of N-Acetylhexosaminidase
Classification: HYDROLASE
Source organism: Cellvibrio mixtus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99514 Å
Deposited: 2024-09-25
Authors: Lu, M., Wan, Q.
PDB entry 9jor: structure of phage T4 topoisomerase II central domain bound with DNA
Classification: ISOMERASE
Source organism: Escherichia phage T4; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2024-09-25
Authors: Chen, Y.T., Xin, Y.H.