LiteFold/PDB huggingface dataset:
PDB entry 4nlw: Poliovirus Polymerase - G289A/C290I Loop Mutant
Classification: Viral Protein, hydrolase
Source organism: Human poliovirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-11-14
Authors: Sholders, A.J., Peersen, O.B.
PDB entry 4nlx: Poliovirus Polymerase - G289A/C290V Loop Mutant
Classification: Viral Protein, hydrolase
Source organism: Human poliovirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-11-14
Authors: Sholders, A.J., Peersen, O.B.
PDB entry 4nly: Poliovirus Polymerase - C290E Loop Mutant
Classification: Viral Protein, hydrolase
Source organism: Human poliovirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-11-14
Authors: Sholders, A.J., Peersen, O.B.
PDB entry 4nlz: Structure of human DNA polymerase beta complexed with nicked DNA containing a mismatched template 8BrG and incoming GTP
Classification: TRANSFERASE, LYASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.683 Å
Deposited: 2013-11-14
Authors: Koag, M.-C., Min, K., Monzingo, A.F., Lee, S.
PDB entry 4nm0: Crystal structure of peptide inhibitor-free GSK-3/Axin complex
Classification: TRANSFERASE/PEPTIDE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-11-14
Authors: Chu, M.L.-H., Stamos, J.L., Enos, M.D., Shah, N., Weis, W.I.
PDB entry 4nm1: Structure of human DNA polymerase beta complexed with a nicked DNA containing a 8BrG-C at N-1 position and G-C at N position
Classification: TRANSFERASE, LYASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.415 Å
Deposited: 2013-11-14
Authors: Koag, M.-C., Min, K., Monzingo, A.F., Lee, S.
PDB entry 4nm2: Structure of human DNA polymerase beta complexed with a nicked DNA containing a 8BrG-G at N-1 position and G-C at N position
Classification: TRANSFERASE, LYASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.524 Å
Deposited: 2013-11-14
Authors: Koag, M.-C., Min, K., Monzingo, A.F., Lee, S.
PDB entry 4nm3: Crystal structure of GSK-3/Axin complex bound to phosphorylated N-terminal auto-inhibitory pS9 peptide
Classification: TRANSFERASE/PEPTIDE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-11-14
Authors: Chu, M.L.-H., Stamos, J.L., Enos, M.D., Shah, N., Weis, W.I.
PDB entry 4nm4: Crystal structure of broadly neutralizing antibody CR8043
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2013-11-14
Authors: Lee, P.S., Wilson, I.A.
PDB entry 4nm5: Crystal structure of GSK-3/Axin complex bound to phosphorylated Wnt receptor LRP6 c-motif
Classification: TRANSFERASE/PEPTIDE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-11-14
Authors: Stamos, J.L., Chu, M.L.-H., Enos, M.D., Shah, N., Weis, W.I.
PDB entry 4nm6: Crystal structure of TET2-DNA complex
Classification: OXIDOREDUCTASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.026 Å
Deposited: 2013-11-14
Authors: Hu, L., Li, Z., Cheng, J., Rao, Q., Gong, W., Liu, M., Wang, P., Xu, Y.
PDB entry 4nm7: Crystal structure of GSK-3/Axin complex bound to phosphorylated Wnt receptor LRP6 e-motif
Classification: TRANSFERASE/PEPTIDE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-11-14
Authors: Stamos, J.L., Chu, M.L.-H., Enos, M.D., Shah, N., Weis, W.I.
PDB entry 4nm8: Crystal structure of broadly neutralizing antibody CR8043 bound to H3 influenza hemagglutinin
Classification: viral protein/immune system
Source organism: Homo sapiens; Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.0041 Å
Deposited: 2013-11-14
Authors: Lee, P.S., Wilson, I.A.
PDB entry 4nm9: Crystal structure of the resting state of proline utilization A (PutA) from Geobacter sulfurreducens PCA
Classification: OXIDOREDUCTASE
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.898 Å
Deposited: 2013-11-14
Authors: Singh, H., Tanner, J.J.
PDB entry 4nma: Crystal structure of proline utilization A (PutA) from Geobacter sulfurreducens PCA in complex with L-tetrahydro-2-furoic acid
Classification: OXIDOREDUCTASE
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.101 Å
Deposited: 2013-11-14
Authors: Singh, H., Tanner, J.J.
PDB entry 4nmb: Crystal structure of proline utilization A (PutA) from Geobacter sulfurreducens PCA in complex with L-lactate
Classification: OXIDOREDUCTASE
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2013-11-14
Authors: Singh, H., Almo, S.C., Tanner, J.J.
PDB entry 4nmc: Crystal structure of oxidized proline utilization A (PutA) from Geobacter sulfurreducens PCA complexed with Zwittergent 3-12
Classification: OXIDOREDUCTASE
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2013-11-14
Authors: Singh, H., Tanner, J.J.
PDB entry 4nmd: Crystal structure of proline utilization A (PutA) from Geobacter sulfurreducens PCA reduced with dithionite
Classification: OXIDOREDUCTASE
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.979 Å
Deposited: 2013-11-14
Authors: Singh, H., Tanner, J.J.
PDB entry 4nme: Crystal structure of proline utilization A (PutA) from Geobacter sulfurreducens PCA inactivated by N-propargylglycine
Classification: OXIDOREDUCTASE
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.088 Å
Deposited: 2013-11-14
Authors: Singh, H., Tanner, J.J.
PDB entry 4nmf: Crystal structure of proline utilization A (PutA) from Geobacter sulfurreducens PCA inactivated by N-propargylglycine and complexed with menadione bisulfite
Classification: OXIDOREDUCTASE
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-11-14
Authors: Singh, H., Tanner, J.J.
PDB entry 4nmg: 2'-Trifluoromethylthio-2'-deoxyuridine-modified SRL
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2013-11-15
Authors: Ennifar, E., Micura, R., Kosutic, M.
PDB entry 4nmh: 11-beta-HSD1 in complex with a 3,3-Di-methyl-azetidin-2-one
Classification: oxidoreductase/oxidoreductase INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-11-15
Authors: McCoull, W., Augustin, M., Blake, C., Ertan, A., Kilgour, E.K., Krapp, S., Moore, J.E., Newcombe, N.J., Packer, M.J., Rees, A., Revill, J., Scott, J.S., Selmi, N., Gerhardt, S., Ogg, D.J., Steinbacher, S., Whittamore, P.R.O.
PDB entry 4nmi: Crystal Structure of the Apo ectoine hydroxylase ECTD from Salibacillus salexigens
Classification: OXIDOREDUCTASE
Source organism: Virgibacillus salexigens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2013-11-15
Authors: Widderich, N., Hoeppner, A., Smits, S.H., Bremer, E.
PDB entry 4nmj: Thermostable aldehyde dehydrogenase from Pyrobaculum sp. complexed with NADP+ at 2 A resolution
Classification: OXIDOREDUCTASE
Source organism: Pyrobaculum sp. 1860
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2013-11-15
Authors: Petrova, T., Boyko, K.M., Bezsudnova, E.Y., Mardanov, A.V., Gumerov, V.M., Ravin, N.V., Popov, V.O.
PDB entry 4nml: 2.60 Angstrom resolution crystal structure of putative ribose 5-phosphate isomerase from Toxoplasma gondii ME49 in complex with DL-Malic acid
Classification: ISOMERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-11-15
Authors: Halavaty, A.S., Dubrovska, I., Flores, K., Shanmugam, D., Shuvalova, L., Roos, D., Ruan, J., Ngo, H., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4nmm: Crystal Structure of a G12C Oncogenic Variant of Human KRas Bound to a Novel GDP Competitive Covalent Inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2013-11-15
Authors: Hunter, J.C., Gurbani, D., Lim, S.M., Westover, K.D.
PDB entry 4nmn: Aquifex aeolicus replicative helicase (DnaB) complexed with ADP, at 3.3 resolution
Classification: REPLICATION
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.301 Å
Deposited: 2013-11-15
Authors: Lyubimov, A.Y., Strycharska, M.S., Erzberger, J.P., Berger, J.M.
PDB entry 4nmo: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(Ac-K-1)(ANSRWPTS[Ac-K]I)
Classification: protein transport/inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-11-15
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4nmp: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(Ac-K-3) (ANSRWP[Ac-K]SII)
Classification: protein transport/inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-11-15
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4nmq: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(Ac-K-4) (ANSRW[Ac-K]TSII)
Classification: protein transport/inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-11-15
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4nmr: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(Ac-K-5) (ANSR[Ac-K]PTSII)
Classification: protein transport/inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-11-15
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4nms: CFTR Associated Ligand (CAL)PDZ domain bound to peptide iCAL36(FLB-K-1) (ANSRWPTS[4-fluorobenzoic-acyl-K]I)
Classification: protein transport/inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-11-15
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4nmt: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(TFA-K-1) (ANSRWPTS[Tfa-acyl-K]I)
Classification: protein transport/inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-11-15
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4nmu: Crystal Structure of Thiol-disulfide Oxidoreductase from Bacillus str. 'Ames Ancestor'
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-11-15
Authors: Kim, Y., Zhou, M., Shatsman, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4nmv: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(BRB-K-1) (ANSRWPTS[4-bromobenzoic-acyl-K]I)
Classification: protein transport/inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-11-15
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4nmw: Crystal Structure of Carboxylesterase BioH from Salmonella enterica
Classification: HYDROLASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.496 Å
Deposited: 2013-11-15
Authors: Kim, Y., Zhou, M., Grimshaw, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4nmx: PCSK9(deltaCRD) in complex with phage-derived inhibitory peptide 2-8
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-11-15
Authors: Eigenbrot, C., Shia, S.
PDB entry 4nmy: Crystal Structure of the Thiamin-bound form of Substrate-binding Protein of ABC Transporter from Clostridium difficile
Classification: TRANSPORT PROTEIN
Source organism: Clostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.896 Å
Deposited: 2013-11-15
Authors: Kim, Y., Zhou, M., Grimshaw, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4nmz: Crystal structure of Staphylococcal nuclease variant Delta+PHS V23Q/V66A at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-11-15
Authors: Caro, J.A., Sorenson, J.L., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4nn0: Crystal structure of the C1QTNF5 globular domain in space group P63
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2013-11-15
Authors: Tu, X., Palczewski, K.
PDB entry 4nn1: Crystal Structure of transcriptional regulator Rv1219c of Mycobacterium tuberculosis
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2013-11-15
Authors: Kumar, N., Radhakrishnan, A., Chou, T.-H., Yu, E.
PDB entry 4nn2: Protein Crystal Structure of Human Borjeson-Forssman-Lehmann Syndrome Associated Protein PHF6
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.472 Å
Deposited: 2013-11-16
Authors: Liu, Z., Li, F., Zhang, J., Mei, Y., Wu, J., Shi, Y.
PDB entry 4nn3: Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens (Desal_2161), Target EFI-510109, with bound orotic acid
Classification: TRANSPORT PROTEIN
Source organism: Desulfovibrio salexigens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-11-16
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4nn5: Cytokine receptor complex - Crystal form 1A
Classification: CYTOKINE/CYTOKINE RECEPTOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.898 Å
Deposited: 2013-11-16
Authors: Verstraete, K., van Schie, L., Savvides, S.N.
PDB entry 4nn6: Cytokine receptor complex - Crystal form 1B
Classification: CYTOKINE/CYTOKINE RECEPTOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.545 Å
Deposited: 2013-11-16
Authors: Verstraete, K., van Schie, L., Savvides, S.N.
PDB entry 4nn7: Cytokine receptor complex - Crystal form 2
Classification: CYTOKINE/CYTOKINE RECEPTOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.775 Å
Deposited: 2013-11-16
Authors: Verstraete, K., van Schie, L., Savvides, S.N.
PDB entry 4nn9: REFINED ATOMIC STRUCTURES OF N9 SUBTYPE INFLUENZA VIRUS NEURAMINIDASE AND ESCAPE MUTANTS
Classification: HYDROLASE(O-GLYCOSYL)
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1991-03-28
Authors: Tulip, W.R., Varghese, J.N., Baker, A.T., Vandonkelaar, A., Laver, W.G., Webster, R.G., Colman, P.M.
PDB entry 4nna: Apo structure of ObcA
Classification: LYASE
Source organism: Burkholderia glumae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.103 Å
Deposited: 2013-11-17
Authors: Oh, J.T., Goo, E., Hwang, I., Rhee, S.
PDB entry 4nnb: Binary complex of ObcA with oxaloacetate
Classification: LYASE
Source organism: Burkholderia glumae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-11-17
Authors: Oh, J.T., Goo, E., Hwang, I., Rhee, S.
PDB entry 4nnc: Ternary complex of ObcA with C4-CoA adduct and oxalate
Classification: LYASE
Source organism: Burkholderia glumae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.279 Å
Deposited: 2013-11-17
Authors: Oh, J.T., Goo, E., Hwang, I., Rhee, S.
PDB entry 4nnd: Structural basis of PTPN18 fingerprint on distinct HER2 tyrosine phosphorylation sites
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.502 Å
Deposited: 2013-11-17
Authors: Wang, H., Yang, F., Yang, D., Du, Y.
PDB entry 4nng: Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Classification: RIBOSOMAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2013-11-18
Authors: Yang, J., Liu, Y., Cai, Q., Lin, D.
PDB entry 4nnh: Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Classification: RIBOSOMAL PROTEIN
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-11-18
Authors: Yang, J., Liu, Y., Cai, Q., Lin, D.
PDB entry 4nni: Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Classification: RIBOSOMAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2013-11-18
Authors: Yang, J., Liu, Y., Cai, Q., Lin, D.
PDB entry 4nnj: Crystal structure of Uba1 in complex with ubiquitin-AMP and thioesterified ubiquitin
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-11-18
Authors: Schaefer, A., Schindelin, H.
PDB entry 4nnk: Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide
Classification: RIBOSOMAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2013-11-18
Authors: Yang, J., Liu, Y., Cai, Q., Lin, D.
PDB entry 4nnl: Tax-Interacting Protein-1 (TIP-1) PDZ domain bound to F-iCAL36 (ANSRFPTSII) peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-11-18
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4nnm: Tax-Interacting Protein-1 (TIP-1) PDZ domain bound to Y-iCAL36 (YPTSII) peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-11-18
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4nnn: yCP in complex with MG132
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-11-18
Authors: Stein, M.L., Cui, H., Beck, P., Dubiella, C., Voss, C., Krueger, A., Schmidt, B., Groll, M.
PDB entry 4nno: Crystal Structure of Manganese ABC transporter substrate-binding protein MntC from Staphylococcus Aureus bound to a Zinc ion
Classification: TRANSPORT PROTEIN
Source organism: Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.174 Å
Deposited: 2013-11-18
Authors: Rouge, L., Ahuja, S., Sudhamsu, J.
PDB entry 4nnp: Crystal Structure of Apo Manganese ABC transporter MntC from Staphylococcus aureus bound to an antagonistic fab fragment
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2013-11-18
Authors: Rouge, L., Sudhamsu, J.
PDB entry 4nnq: Crystal structure of LnmF protein from Streptomyces amphibiosporus
Classification: LYASE
Source organism: Streptomyces atroolivaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2013-11-18
Authors: Michalska, K., Bigelow, L., Endres, M., Babnigg, G., Bingman, C.A., Yennamalli, R., Lohman, J., Ma, M., Shen, B., Phillips Jr., G.N., Joachimiak, A., Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
PDB entry 4nnr: FKBP13-FK506 Complex
Classification: isomerase/isomerase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2013-11-18
Authors: Schultz, L.W., Martin, P.K., Liang, J., Schreiber, S.L., Clardy, J.
PDB entry 4nns: Crystal structure of FABP4 in complex with novel inhibitor
Classification: LIPID BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2013-11-19
Authors: Liu, Q.F., Chen, T.T., Xu, Y.C.
PDB entry 4nnt: Crystal structure of FABP4 in complex with novel inhibitor
Classification: LIPID BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2013-11-19
Authors: Liu, Q.F., Chen, T.T., Xu, Y.C.
PDB entry 4nnu: Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2013-11-19
Authors: Ngo, H.B., Lovely, G.A., Phillips, R., Chan, D.C.
PDB entry 4nnw: yCP in complex with Z-Leu-Leu-Leu-ketoaldehyde
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-11-19
Authors: Stein, M.L., Cui, H., Beck, P., Dubiella, C., Voss, C., Krueger, A., Schmidt, B., Groll, M.
PDB entry 4nnx: Crystal structure of PKD2 phosphopeptide bound to HLA-A2
Classification: IMMUNE SYSTEM/ANTIGEN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2013-11-19
Authors: Mohammed, F., Stones, D.H., Willcox, B.E.
PDB entry 4nny: Crystal structure of non-phosphorylated form of PKD2 phosphopeptide bound to HLA-A2
Classification: IMMUNE SYSTEM/ANTIGEN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-11-19
Authors: Mohammed, F., Stones, D.H., Willcox, B.E.
PDB entry 4nnz: Subunit PA0372 of heterodimeric zinc protease PA0371-PA0372
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.478 Å
Deposited: 2013-11-19
Authors: Mamelli, L., Goemaere, E., Spinelli, S., Vuillard, L.
PDB entry 4no0: Crystal structure of non-phosphorylated form of RQA_V phosphopeptide bound to HLA-A2 in complex with LILRB1
Classification: IMMUNE SYSTEM/ANTIGEN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-11-19
Authors: Mohammed, F., Stones, D.H., Willcox, B.E.
PDB entry 4no1: yCP in complex with Z-Leu-Leu-Leu-B(OH)2
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-11-19
Authors: Stein, M.L., Cui, H., Beck, P., Dubiella, C., Voss, C., Krueger, A., Schmidt, B., Groll, M.
PDB entry 4no2: Crystal structure of RQA_V phosphopeptide bound to HLA-A2
Classification: IMMUNE SYSTEM/ANTIGEN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-11-19
Authors: Mohammed, F., Stones, D.H., Willcox, B.E.
PDB entry 4no3: Crystal structure of AMPD2 phosphopeptide bound to HLA-A2
Classification: IMMUNE SYSTEM/ANTIGEN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.703 Å
Deposited: 2013-11-19
Authors: Mohammed, F., Stones, D.H., Willcox, B.E.
PDB entry 4no4: Crystal Structure of Galectin-1 L11A mutant
Classification: APOPTOSIS
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.399 Å
Deposited: 2013-11-19
Authors: Dessau, M.
PDB entry 4no5: Crystal structure of non-phosphorylated form of AMPD2 phosphopeptide bound to HLA-A2
Classification: IMMUNE SYSTEM/ANTIGEN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.101 Å
Deposited: 2013-11-19
Authors: Mohammed, F., Stones, D.H., Willcox, B.E.
PDB entry 4no6: yCP in complex with Z-Leu-Leu-Leu-vinylsulfone
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-11-19
Authors: Stein, M.L., Cui, H., Beck, P., Dubiella, C., Voss, C., Krueger, A., Schmidt, B., Groll, M.
PDB entry 4no7: Human Glucokinase in complex with a nanomolar activator.
Classification: TRANSFERASE/TRANSFERASE ACTIVATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-11-19
Authors: Petit, P., Ferry, G., Antoine, M., Boutin, J.A., Kotschy, A., Perron-Sierra, F., Mamelli, L., Vuillard, L.
PDB entry 4no8: yCP in complex with Z-Leu-Leu-Leu-ketoamide
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-11-19
Authors: Stein, M.L., Cui, H., Beck, P., Dubiella, C., Voss, C., Krueger, A., Schmidt, B., Groll, M.
PDB entry 4no9: yCP in complex with Z-Leu-Leu-Leu-epoxyketone
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-11-19
Authors: Stein, M.L., Cui, H., Beck, P., Dubiella, C., Voss, C., Krueger, A., Schmidt, B., Groll, M.
PDB entry 4noa: Truncated minor pilin PilE from Pseudomonas aeruginosa
Classification: UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2013-11-19
Authors: Nguyen, Y., Sugiman-Marangos, S.N., Bell, S., Junop, M.S., Burrows, L.L.
PDB entry 4nob: Crystal structure of the 1st Ig domain from mouse Polymeric Immunoglobulin receptor [PSI-NYSGRC-006220]
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2013-11-19
Authors: Kumar, P.R., Banu, R., Bhosle, R., Calarese, D.A., Celikgil, A., Chamala, S., Chan, M.K., Chowdhury, S., Fiser, A., Garforth, S.J., Glenn, A.S., Hillerich, B., Khafizov, K., Attonito, J., Love, J.D., Patel, H., Patel, R., Seidel, R.D., Smith, B., Stead, M., Casadevall, A., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
PDB entry 4noc: The crystal structure of a CBS Domain-containing Protein of Unknown Function from Kribbella flavida DSM 17836.
Classification: SIGNALING PROTEIN
Source organism: Kribbella flavida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-11-19
Authors: Tan, K., Hatzos-Skintges, C., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4nod: Distinct structural features of TFAM drive mitochondrial DNA packaging versus transcriptional activation
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.897 Å
Deposited: 2013-11-19
Authors: Ngo, H.B., Lovely, G.A., Phillips, R., Chan, D.C.
PDB entry 4noe: Crystal structure of DdrB bound to 30b ssDNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Deinococcus radiodurans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-11-19
Authors: Sugiman-Marangos, S.N., Weiss, Y.M., Junop, M.S.
PDB entry 4nof: Crystal structure of the second Ig domain from mouse Polymeric Immunoglobulin receptor [PSI-NYSGRC-006220]
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-11-19
Authors: Sampathkumar, P., Kumar, P.R., Ahmed, M., Banu, R., Bhosle, R., Calarese, D.A., Celikgil, A., Chamala, S., Chan, M.K., Chowdhury, S., Fiser, A., Garforth, S.J., Glenn, A.S., Hillerich, B., Khafizov, K., Attonito, J., Love, J.D., Patel, H., Patel, R., Seidel, R.D., Smith, B., Stead, M., Casadevall, A., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
PDB entry 4nog: Crystal structure of a putative ornithine aminotransferase from Toxoplasma gondii ME49 in complex with pyrodoxal-5'-phosphate
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2013-11-19
Authors: Filippova, E.V., Halavaty, A., Ruan, J., Shuvalova, L., Flores, K., Dubrovska, I., Ngo, H., Shanmugam, D., Roos, D., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4noh: 1.5 Angstrom Crystal Structure of Putative Lipoprotein from Bacillus anthracis.
Classification: LIPID BINDING PROTEIN
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.502 Å
Deposited: 2013-11-19
Authors: Minasov, G., Shuvalova, L., Halavaty, A., Winsor, J., Dubrovska, I., Shatsman, S., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4noi: 2.17 Angstrom Crystal Structure of DNA-directed RNA Polymerase Subunit Alpha from Campylobacter jejuni.
Classification: TRANSFERASE
Source organism: Campylobacter jejuni subsp. jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2013-11-19
Authors: Minasov, G., Shuvalova, L., Dubrovska, I., Winsor, J., Grimshaw, S., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4noj: Crystal structure of the mature form of asparaginyl endopeptidase (AEP)/Legumain activated at pH 3.5
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-11-19
Authors: Zhao, L., Hua, T., Ru, H., Ni, X., Shaw, N., Jiao, L., Ding, W., Qu, L., Ouyang, S., Liu, Z.J.
PDB entry 4nok: Crystal structure of proenzyme asparaginyl endopeptidase (AEP)/Legumain at pH 7.5
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-11-19
Authors: Zhao, L., Hua, T., Ru, H., Ni, X., Shaw, N., Jiao, L., Ding, W., Qu, L., Ouyang, S., Liu, Z.J.
PDB entry 4nol: Crystal structure of proenzyme asparaginyl endopeptidase (AEP)/Legumain mutant D233A at pH 7.5
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-11-19
Authors: Zhao, L., Hua, T., Ru, H., Ni, X., Shaw, N., Jiao, L., Ding, W., Qu, L., Ouyang, S., Liu, Z.J.
PDB entry 4nom: Crystal structure of asparaginyl endopeptidase (AEP)/Legumain activated at pH 4.5
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.006 Å
Deposited: 2013-11-19
Authors: Zhao, L., Hua, T., Ru, H., Ni, X., Shaw, N., Jiao, L., Ding, W., Qu, L., Ouyang, S., Liu, Z.J.
PDB entry 4non: Crystal structure of GDP-bound A143S mutant of the S. thermophilus FeoB G-domain
Classification: METAL TRANSPORT
Source organism: Streptococcus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-11-20
Authors: Guilfoyle, A.P., Deshpande, C.N., Jormakka, M.
PDB entry 4noo: Molecular mechanism for self-protection against type VI secretion system in Vibrio cholerae
Classification: IMMUNE SYSTEM
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-11-20
Authors: Yang, X., Xu, M., Jiang, T., Fan, Z.
PDB entry 4nos: HUMAN INDUCIBLE NITRIC OXIDE SYNTHASE WITH INHIBITOR
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 1999-02-03
Authors: Fischmann, T.O., Weber, P.C.
PDB entry 4not: Crystal structure of Dioclea sclerocarpa lectin complexed with X-man
Classification: SUGAR BINDING PROTEIN
Source organism: Dioclea sclerocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-11-20
Authors: Barroso-Neto, I.L., Teixeira, C.S., Correia, J.L.A., Santiago, M.Q., Pinto-Junior, V.R., Osterne, V.J.S., Plinio, D., Rocha, B.A.M., Cavada, B.S.
PDB entry 4nov: Xsa43E, a GH43 family enzyme from Butyrivibrio proteoclasticus
Classification: HYDROLASE
Source organism: Butyrivibrio proteoclasticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2013-11-20
Authors: Till, M., Arcus, V.L.
PDB entry 4nox: Structure of the nine-bladed beta-propeller of eIF3b
Classification: TRANSLATION
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.722 Å
Deposited: 2013-11-20
Authors: Liu, Y., Neumann, P., Kuhle, B., Monecke, T., Ficner, R.
PDB entry 4noy: Crystal structure of Listeria monocytogenes Hfq F43W
Classification: RNA BINDING PROTEIN
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.795 Å
Deposited: 2013-11-20
Authors: Canty, J.T., Kovach, A.R., Brennan, R.G.
PDB entry 4noz: Crystal Structure of an Organic Hydroperoxide Resistance Protein from Burkholderia cenocepacia
Classification: PROTEIN BINDING
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2013-11-20
Authors: Dranow, D.M., Lukacs, C.M., Edwards, T.E., Lorimer, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4np1: NITROPHORIN 1 COMPLEX WITH NITRIC OXIDE
Classification: VASODILATOR
Source organism: Rhodnius prolixus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1998-06-26
Authors: Weichsel, A., Andersen, J.F., Walker, F.A., Montfort, W.R.
PDB entry 4np2: Crystal structure of the murine CD44 hyaluronan binding domain complex with a small molecule
Classification: Cell adhesion/inhibitor
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-11-20
Authors: Liu, L.K., Finzel, B.
PDB entry 4np3: Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule
Classification: Cell adhesion/inhibitor
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2013-11-20
Authors: Liu, L.K., Finzel, B.
PDB entry 4np4: Clostridium difficile toxin B CROP domain in complex with FAB domains of neutralizing antibody bezlotoxumab
Classification: IMMUNE SYSTEM
Source organism: Clostridium difficile; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2013-11-20
Authors: Orth, P., Xiao, L., Hernandez, L.D., Reichert, P., Sheth, P., Beaumont, M., Murgolo, N., Ermakov, G., DiNunzio, E., Racine, F., Karczewski, J., Secore, S., Ingram, R.N., Mayhood, T., Strickland, C., Therien, A.G.
PDB entry 4np5: Crystal structure of Staphylococcal nuclease variant Delta+PHS V66A/I92N at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-11-20
Authors: Caro, J.A., Nam, S., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4np6: Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor
Classification: TRANSFERASE
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.004 Å
Deposited: 2013-11-20
Authors: Kim, Y., Zhou, M., Grimshaw, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4np7: Structure of phosphotriesterase mutant (S308L/Y309A) from Agrobacterium radiobacter with diethyl thiophosphate bound in the active site
Classification: HYDROLASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2013-11-20
Authors: Jackson, C.J., Carr, P.D., Sugrue, E.
PDB entry 4np8: Structure of an amyloid forming peptide VQIVYK from the second repeat region of tau (alternate polymorph)
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2013-11-20
Authors: Landau, M., Eisenberg, D., Sawaya, M.R., Dannenberg, J., Kobko, N.
PDB entry 4np9: Structure of Rabphilin C2A domain bound to IP3
Classification: PROTEIN TRANSPORT
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2013-11-21
Authors: Guillen, J., Ferrer-Orta, C., Buxaderas, M., Perez-Sanchez, D., Guerrero-Valero, M., Luengo-Gil, G., Pous, J., Guerra, P., Gomez-Fernandez, J.C., Verdaguer, N., Corbalan-Garcia, S.
PDB entry 4npa: Scrystal structure of protein with unknown function from Vibrio cholerae at P22121 spacegroup
Classification: UNKNOWN FUNCTION
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-11-21
Authors: Boyko, K.M., Gorbacheva, M.A., Rakitina, T.V., Korgenevsky, D.A., Dorovatovsky, P.V., Lipkin, A.V., Minor, W., Shumilin, I.A., Popov, V.O.
PDB entry 4npb: The crystal structure of thiol:disulfide interchange protein DsbC from Yersinia pestis CO92
Classification: ISOMERASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.147 Å
Deposited: 2013-11-21
Authors: Tan, K., Zhou, M., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4npc: Crystal Structure of an Oxidoreductase, Short-Chain Dehydrogenase/Reductase Family Protein from Brucella suis
Classification: OXIDOREDUCTASE
Source organism: Brucella suis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-11-21
Authors: Dranow, D.M., Davies, D.R., Edwards, T.E., Lorimer, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4npd: High-resolution structure of C domain of staphylococcal protein A at cryogenic temperature
Classification: PROTEIN BINDING
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2013-11-21
Authors: Deis, L.N., Pemble IV, C.W., Oas, T.G., Richardson, J.S., Richardson, D.C.
PDB entry 4npe: High-resolution structure of C domain of staphylococcal protein A at room temperature
Classification: PROTEIN BINDING
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2013-11-21
Authors: Deis, L.N., Pemble IV, C.W., Oas, T.G., Richardson, J.S., Richardson, D.C.
PDB entry 4npf: High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker
Classification: PROTEIN BINDING
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2013-11-21
Authors: Deis, L.N., Pemble IV, C.W., Oas, T.G., Richardson, J.S., Richardson, D.C.
PDB entry 4nph: Crystal structure of SsaN from Salmonella enterica
Classification: PROTEIN TRANSPORT
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2013-11-21
Authors: Sugiman-Marangos, S.N., Zhang, K., Cooper, C.A., Coombes, B.K., Junop, M.S.
PDB entry 4npi: 1.94 Angstroms X-ray crystal structure of NAD- and intermediate- bound alpha-aminomuconate-epsilon-semialdehyde dehydrogenase from Pseudomonas fluorescens
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2013-11-21
Authors: Huo, L., Davis, I., Liu, F., Iwaki, H., Hasegawa, Y., Liu, A.
PDB entry 4npj: Extended-Synaptotagmin 2, C2A- and C2B-domains
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.101 Å
Deposited: 2013-11-21
Authors: Tomchick, D.R., Rizo, J., Xu, J.
PDB entry 4npk: Extended-Synaptotagmin 2, C2A- and C2B-domains, calcium bound
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.552 Å
Deposited: 2013-11-21
Authors: Tomchick, D.R., Rizo, J., Xu, J.
PDB entry 4npl: Crystal structure of Zebrafish ALKBH5 in complex with alpha-ketoglutarate
Classification: OXIDOREDUCTASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.651 Å
Deposited: 2013-11-21
Authors: He, C., Chen, W., Zhang, L.
PDB entry 4npm: Crystal structure of Zebrafish ALKBH5 in complex with succinic acid
Classification: OXIDOREDUCTASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.803 Å
Deposited: 2013-11-21
Authors: He, C., Chen, W., Zhang, L.
PDB entry 4npn: Crystal structure of human tetra-SUMO-2
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.633 Å
Deposited: 2013-11-22
Authors: Kung, C.C.-H., Naik, M.T., Chen, C.L., Ma, C., Huang, T.H.
PDB entry 4npo: Crystal structure of protein with unknown function from Deinococcus radiodurans at P61 spacegroup
Classification: UNKNOWN FUNCTION
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2013-11-22
Authors: Boyko, K.M., Gorbacheva, M.A., Rakitina, T.V., Korgenevsky, D.A., Shabalin, I.G., Shumilin, I.A., Dorovatovsky, P.V., Lipkin, A.V., Popov, V.O.
PDB entry 4npp: The GLIC-His10 wild-type structure in equilibrium between the open and locally-closed (LC) forms
Classification: TRANSPORT PROTEIN
Source organism: Gloeobacter violaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2013-11-22
Authors: Sauguet, L., Shahsavar, A., Poitevin, F., Huon, C., Menny, A., Nemecz, A., Haouz, A., Changeux, J.P., Corringer, P.J., Delarue, M.
PDB entry 4npq: The resting-state conformation of the GLIC ligand-gated ion channel
Classification: TRANSPORT PROTEIN
Source organism: Gloeobacter violaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.35 Å
Deposited: 2013-11-22
Authors: Sauguet, L., Shahsavar, A., Poitevin, F., Huon, C., Menny, A., Nemecz, A., Haouz, A., Changeux, J.P., Corringer, P.J., Delarue, M.
PDB entry 4npr: Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus
Classification: HYDROLASE
Source organism: Aspergillus niveus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-11-22
Authors: Cordeiro, R.L., Santos, C.R., Furtado, G.P., Damasio, A.R.L., Polizeli, M.L.T.M., Ward, R.J., Murakami, M.T.
PDB entry 4nps: Crystal Structure of Bep1 protein (VirB-translocated Bartonella effector protein) from Bartonella clarridgeiae
Classification: CELL ADHESION
Source organism: Bartonella clarridgeiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-11-22
Authors: Dranow, D.M., Abendroth, J., Edwards, T.E., Lorimer, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4npt: Crystal Structure of HIV-1 Protease Multiple Mutant P51 Complexed with Darunavir
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2013-11-22
Authors: Zhang, Y., Weber, I.T.
PDB entry 4npu: Crystal Structure of HIV-1 Protease Multiple Mutant P51
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-11-22
Authors: Zhang, Y., Weber, I.T.
PDB entry 4npv: Crystal structure of human PDE1B bound to inhibitor 7A (6,7,8-trimethoxy-N-(pentan-3-yl)quinazolin-4-amine)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-11-22
Authors: Pandit, J., Evdomikov, A., Mansour, M., Simons, S.
PDB entry 4npw: Crystal structure of human PDE1B bound to inhibitor 19A (7,8-dimethoxy-N-[(2S)-1-(3-methyl-1H-pyrazol-5-yl)propan-2-yl]quinazolin-4-amine)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-11-22
Authors: Pandit, J., Evdomikov, A., Mansour, M., Simons, S.
PDB entry 4npx: Structure of hypothetical protein Cj0539 from Campylobacter jejuni
Classification: UNKNOWN FUNCTION
Source organism: Campylobacter jejuni subsp. jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2013-11-22
Authors: Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Adkins, J.N., Endres, M., Nissen, M., Konkel, M., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
PDB entry 4npy: Crystal structure of germline Fab PGT121, a putative precursor of the broadly reactive and potent HIV-1 neutralizing antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.796 Å
Deposited: 2013-11-22
Authors: Julien, J.-P., Diwanji, D.C., Wilson, I.A.
PDB entry 4nq0: Structural insights into yeast histone chaperone Hif1: a scaffold protein recruiting protein complexes to core histones
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-11-23
Authors: Liu, H., Zhang, M., He, W., Zhu, Z., Teng, M., Gao, Y., Niu, L.
PDB entry 4nq1: Legionella pneumophila dihydrodipicolinate synthase with first substrate pyruvate bound in the active site
Classification: LYASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-11-23
Authors: Siddiqui, T., Paxman, J.J.
PDB entry 4nq2: Structure of Zn(II)-bound metallo-beta-lactamse VIM-2 from Pseudomonas aeruginosa
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-11-23
Authors: Aitha, M., Nix, J.C., Crowder, M.W., Page, R.C.
PDB entry 4nq3: Crystal structure of cyanuic acid hydrolase from A. caulinodans
Classification: HYDROLASE
Source organism: Azorhizobium caulinodans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.702 Å
Deposited: 2013-11-23
Authors: Cho, S., Shi, K., Aihara, H.
PDB entry 4nq4: Bacillus cereus Zn-dependent metallo-beta-lactamase at pH 7
Classification: HYDROLASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2013-11-23
Authors: Gonzalez, J.M., Gonzalez, M.M., Vila, A.J.
PDB entry 4nq5: Bacillus cereus Zn-dependent metallo-beta-lactamase at pH 7 complexed with compound CS319
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2013-11-23
Authors: Gonzalez, J.M., Gonzalez, M.M., Vila, A.J.
PDB entry 4nq6: Bacillus cereus Zn-dependent metallo-beta-lactamase at pH 7 complexed with compound L-CS319
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-11-23
Authors: Gonzalez, J.M., Gonzalez, M.M., Vila, A.J.
PDB entry 4nq8: Crystal structure of a trap periplasmic solute binding protein from Bordetella bronchispeptica (bb3421), target EFI-510039, with density modeled as pantoate
Classification: PROTEIN TRANSPORT
Source organism: Bordetella bronchiseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-11-24
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4nqa: Crystal structure of liganded hRXR-alpha/hLXR-beta heterodimer on DNA
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.102 Å
Deposited: 2013-11-24
Authors: Lou, X.H., Toresson, G., Benod, C., Suh, J.H., Phillips, K.J., Webb, P., Gustafsson, J.A.
PDB entry 4nqc: Crystal structure of TCR-MR1 ternary complex and covalently bound 5-(2-oxopropylideneamino)-6-D-ribitylaminouracil
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-11-25
Authors: Birkinshaw, R.W., Rossjohn, J.
PDB entry 4nqd: Crystal structure of TCR-MR1 ternary complex and non-covalently bound 5-(2-oxopropylideneamino)-6-D-ribitylaminouracil
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-11-25
Authors: Birkinshaw, R.W., Rossjohn, J.