LiteFold/PDB huggingface dataset:
PDB entry 8c8u: Priestia megaterium mupirocin-resistant isoleucyl-tRNA synthetase 2 complexed with mupirocin
Classification: RNA BINDING PROTEIN
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2023-01-21
Authors: Brkic, A., Leibundgut, M., Jablonska, J., Zanki, V., Car, Z., Petrovic Perokovic, V., Gruic-Sovulj, I., Ban, N.
PDB entry 8c8v: Priestia megaterium mupirocin-resistant isoleucyl-tRNA synthetase 2 with a fully-resolved C-terminal tRNA-binding domain complexed with an isoleucyl-adenylate analogue
Classification: RNA BINDING PROTEIN
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-01-21
Authors: Brkic, A., Leibundgut, M., Jablonska, J., Zanki, V., Car, Z., Petrovic Perokovic, V., Ban, N., Gruic-Sovulj, I.
PDB entry 8c8w: Priestia megaterium mupirocin hyper-resistant HIGH motif mutant of type 2 isoleucyl-tRNA synthetase complexed with an isoleucyl-adenylate analogue
Classification: RNA BINDING PROTEIN
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2023-01-21
Authors: Brkic, A., Leibundgut, M., Jablonska, J., Zanki, V., Car, Z., Petrovic Perokovic, V., Ban, N., Gruic-Sovulj, I.
PDB entry 8c8x: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c8y: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c8z: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c90: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c91: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.19 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c92: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c93: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c94: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c95: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.92 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c96: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.43 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c97: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c98: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c99: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-01-21
Authors: Nikolay, R., Qin, B., Lauer, S.
PDB entry 8c9a: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.86 Å
Deposited: 2023-01-21
Authors: Lauer, S., Nikolay, R., Qin, B.
PDB entry 8c9b: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.9 Å
Deposited: 2023-01-21
Authors: Nikolay, R., Qin, B., Lauer, S.
PDB entry 8c9c: Cryo-EM captures early ribosome assembly in action
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.62 Å
Deposited: 2023-01-21
Authors: Nikolay, R., Qin, B., Lauer, S.
PDB entry 8c9d: Priestia megaterium W130Q mutant of type 2 isoleucyl-tRNA synthetase complexed with an isoleucyl-adenylate analogue
Classification: RNA BINDING PROTEIN
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-01-21
Authors: Brkic, A., Leibundgut, M., Jablonska, J., Zanki, V., Car, Z., Petrovic Perokovic, V., Ban, N., Gruic-Sovulj, I.
PDB entry 8c9e: Priestia megaterium mupirocin-sensitive isoleucyl-tRNA synthetase 1 complexed with an isoleucyl-adenylate analogue
Classification: RNA BINDING PROTEIN
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-01-21
Authors: Brkic, A., Leibundgut, M., Jablonska, J., Zanki, V., Car, Z., Petrovic Perokovic, V., Ban, N., Gruic-Sovulj, I.
PDB entry 8c9f: Priestia megaterium inactive HIGH motif mutant of type1 isoleucyl-tRNA synthetase complexed with an isoleucyl-adenylate analogue.
Classification: RNA BINDING PROTEIN
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-01-21
Authors: Brkic, A., Leibundgut, M., Jablonska, J., Zanki, V., Car, Z., Petrovic Perokovic, V., Ban, N., Gruic-Sovulj, I.
PDB entry 8c9g: Priestia megaterium mupirocin-sensitive isoleucyl-tRNA synthetase 1 complexed with mupirocin
Classification: RNA BINDING PROTEIN
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-01-22
Authors: Brkic, A., Leibundgut, M., Jablonska, J., Zanki, V., Car, Z., Petrovic Perokovic, V., Ban, N., Gruic-Sovulj, I.
PDB entry 8c9h: AQP7_inhibitor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-01-22
Authors: Huang, P., Venskutonyte, R., Gourdon, P., Lindkvist-Petersson, K.
PDB entry 8c9i: Cytochrome P450 CYP141A1 (Rv3121) from Mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-01-23
Authors: Selvam, I.R.
PDB entry 8c9j: Crystal structure of human NQO1 by serial femtosecond crystallography
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-01-23
Authors: Martin-Garcia, J.M., Grieco, A., Ruiz-Fresneda, M.A., Pacheco-Garcia, J.L., Pey, A., Botha, S., Ros, A.
PDB entry 8c9k: Structure of Mpox virus poxin
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-01-23
Authors: Duchoslav, V., Boura, E.
PDB entry 8c9l: Crystal structure of SARS-CoV-2 Mpro-S144A mutant, free enzyme
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-01-23
Authors: El Kilani, H., Ibrahim, M., Hilgenfeld, R.
PDB entry 8c9m: HERV-K Gag immature lattice
Classification: VIRUS LIKE PARTICLE
Source organism: Human endogenous retrovirus K
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-01-23
Authors: Krebs, A.-S., Liu, H.-F., Zhou, Y., Rey, J.S., Levintov, L., Perilla, J.R., Bartesaghi, A., Zhang, P.
PDB entry 8c9n: MiniCoV-ADDomer, a SARS-CoV-2 epitope presenting viral like particle
Classification: VIRUS LIKE PARTICLE
Source organism: Human adenovirus B3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.36 Å
Deposited: 2023-01-23
Authors: Bufton, J.C., Capin, J., Boruku, U., Garzoni, F., Schaffitzel, C., Berger, I.
PDB entry 8c9o: Crystal structure of SARS-CoV-2 Mpro-S144A mutant in complex with 13b-K
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-01-23
Authors: Ibrahim, M., El Kilani, H., Hilgenfeld, R.
PDB entry 8c9p: Crystal structure of SARS-CoV-2 Mpro-E166V mutant, free enzyme
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-23
Authors: El Kilani, H., Ibrahim, M., Hilgenfeld, R.
PDB entry 8c9q: Crystal structure of SARS-CoV-2 Mpro-Q189K mutant in complex with 13b-K
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2023-01-23
Authors: El Kilani, H., Hilgenfeld, R.
PDB entry 8c9s: Catechol O-methyltransferase from Streptomyces avermitilis in complex with SAH
Classification: TRANSFERASE
Source organism: Streptomyces avermitilis MA-4680 = NBRC 14893
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-01-23
Authors: Zhang, L., Groves, M.R.
PDB entry 8c9t: Catechol O-methyltransferase from Streptomyces avermitilis
Classification: TRANSFERASE
Source organism: Streptomyces avermitilis MA-4680 = NBRC 14893
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-01-23
Authors: Zhang, L., Groves, M.R.
PDB entry 8c9u: Crystal structure of SARS-CoV-2 Mpro-Q189K mutant in complex with nirmatrelvir
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-01-23
Authors: El Kilani, H., Hilgenfeld, R.
PDB entry 8c9v: O-methyltransferase from Desulfuromonas acetoxidans
Classification: TRANSFERASE
Source organism: Desulfuromonas acetoxidans DSM 684
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-01-23
Authors: Zhang, L., Groves, M.R.
PDB entry 8c9w: Crystal structure of the adenosine A2A receptor (construct A2A-PSB2-bRIL) complexed with Etrumadenant at the orthosteric pocket
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.114 Å
Deposited: 2023-01-23
Authors: Strater, N., Claff, T., Schlegel, J.G., Voss, J.H., Vaassen, V., Muller, C.E.
PDB entry 8c9x: human alpha7 nicotinic receptor in complex with the C4 nanobody
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos huacaya
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-01-23
Authors: Prevost, M.S., Barilone, N., Dejean de la Batie, G., Pons, S., Ayme, G., England, P., Gielen, M., Bontems, F., Pehau-Arnaudet, G., Maskos, U., Lafaye, P., Corringer, P.-J.
PDB entry 8c9y: The MK-RSL - sulfonato-calix[8]arene complex, H32 form
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2023-01-23
Authors: Mockler, N.M., Ramberg, K., Crowley, P.B.
PDB entry 8c9z: The RSL - sulfonato-calix[8]arene complex, H32 form, citrate pH 6.0
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2023-01-23
Authors: Mockler, N.M., Ramberg, K., Crowley, P.B.
PDB entry 8ca0: Macrophage inhibitory factor (MIF) in complex with small molecule PAV174
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-01-24
Authors: Mueller, A., Torres, F., Roland, R., Korth, C.
PDB entry 8ca1: Cryo-EM structure of the ACADVL dimer from Mus musculus.
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-01-24
Authors: Yin, Z., Bridges, H.R., Agip, A.N.A., Hirst, J.
PDB entry 8ca2: ENGINEERING THE HYDROPHOBIC POCKET OF CARBONIC ANHYDRASE II
Classification: LYASE(OXO-ACID)
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 1991-07-09
Authors: Alexander, R.S., Christianson, D.W.
PDB entry 8ca3: Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 2).
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-01-24
Authors: Yin, Z., Bridges, H.R., Agip, A.N.A., Hirst, J.
PDB entry 8ca4: Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 2 N-domain).
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-01-24
Authors: Yin, Z., Bridges, H.R., Agip, A.N.A., Hirst, J.
PDB entry 8ca5: Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 3).
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-01-24
Authors: Yin, Z., Bridges, H.R., Agip, A.N.A., Hirst, J.
PDB entry 8ca6: Crystal structure of SARS-CoV-2 Mpro-Q189K mutant, free enzyme
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-01-24
Authors: El Kilani, H., Hilgenfeld, R.
PDB entry 8ca7: Omadacycline and spectinomycin bound to the 30S ribosomal subunit head
Classification: RIBOSOME
Source organism: Escherichia coli BW25113
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2023-01-24
Authors: Paternoga, H., Crowe-McAuliffe, C., Wilson, D.N.
PDB entry 8ca8: Crystal structure of SARS-CoV-2 Mpro-H172Y mutant, free enzyme
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-24
Authors: El Kilani, H., Ibrahim, M., Hilgenfeld, R.
PDB entry 8ca9: Cryo-EM structure of the Cibeles-Demetra 3:3 heterocomplex from Galleria mellonella saliva
Classification: UNKNOWN FUNCTION
Source organism: Galleria mellonella
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2023-01-24
Authors: Spinola-Amilibia, M., Arias-Palomo, E.
PDB entry 8caa: Crystal structure of TEAD4 in complex with YTP-13
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.999 Å
Deposited: 2023-01-24
Authors: Scheufler, C., Kallen, J.
PDB entry 8cac: Crystal structure of SARS-CoV-2 Mpro-H172Y mutant in complex with 13b-K
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2023-01-24
Authors: Ibrahim, M., El Kilani, H., Hilgenfeld, R.
PDB entry 8cad: Cryo-EM structure of the Ceres homohexamer from Galleria mellonella saliva
Classification: UNKNOWN FUNCTION
Source organism: Galleria mellonella
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2023-01-24
Authors: Spinola-Amilibia, M., Arias-Palomo, E.
PDB entry 8cae: Crystal structure of SARS-CoV-2 Mpro-H172Y mutant in complex with nirmatrelvir
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-01-24
Authors: El Kilani, H., Hilgenfeld, R.
PDB entry 8caf: N8C_Fab3b in complex with NEDD8-CUL1(WHB)
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2023-01-24
Authors: Duda, D.M., Yanishevski, D., Henneberg, L.T., Schulman, B.A.
PDB entry 8cag: Hypoxanthine-guanine phosphoribosyltransferase from E. coli
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-01-24
Authors: Timofeev, V.I., Shevtsov, M.B., Abramchik, Y.A., Kostromina, M.A., Zayats, E.A., Kuranova, I.P., Esipov, R.S.
PDB entry 8cah: Cryo-EM structure of native Otu2-bound ubiquitinated 43S pre-initiation complex
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae W303
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-01-24
Authors: Ikeuchi, K., Buschauer, R., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 8cai: Streptomycin and Hygromycin B bound to the 30S body
Classification: RIBOSOME
Source organism: Escherichia coli BW25113
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.08 Å
Deposited: 2023-01-24
Authors: Paternoga, H., Crowe-McAuliffe, C., Novacek, J., Wilson, D.N.
PDB entry 8caj: Crystal structure of SARS-CoV-2 Mpro-E166V mutant in complex with 13b-K
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-01-24
Authors: El Kilani, H., Hilgenfeld, R.
PDB entry 8cak: Crystal structure of dehydrogenase domain of Cylindrospermum stagnale NADPH-Oxidase 5 (NOX5) in complex with M41
Classification: OXIDOREDUCTASE
Source organism: Cylindrospermum stagnale BEA 0605B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2023-01-24
Authors: Reis, J., Mattevi, A.
PDB entry 8cal: Crystal structure of dehydrogenase domain of Cylindrospermum stagnale NADPH-Oxidase 5 (NOX5) in complex with M34
Classification: OXIDOREDUCTASE
Source organism: Cylindrospermum stagnale
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2023-01-24
Authors: Reis, J., Mattevi, A.
PDB entry 8cam: Evernimicin bound to the 50S subunit
Classification: RIBOSOME
Source organism: Escherichia coli BW25113
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.86 Å
Deposited: 2023-01-24
Authors: Paternoga, H., Crowe-McAuliffe, C., Novacek, J., Wilson, D.N.
PDB entry 8can: Cryo-EM structure of the Cora homohexamer from Galleria mellonella saliva
Classification: UNKNOWN FUNCTION
Source organism: Galleria mellonella
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.93 Å
Deposited: 2023-01-24
Authors: Spinola-Amilibia, M., Arias-Palomo, E.
PDB entry 8cao: Crystal structure of dehydrogenase domain of Cylindrospermum stagnale NADPH-Oxidase 5 (NOX5) in complex with CA24
Classification: OXIDOREDUCTASE
Source organism: Cylindrospermum stagnale
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-01-24
Authors: Reis, J., Mattevi, A.
PDB entry 8cap: Crystal structure of dehydrogenase domain of Cylindrospermum stagnale NADPH-Oxidase 5 (NOX5) in complex with CB28
Classification: OXIDOREDUCTASE
Source organism: Cylindrospermum stagnale
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-01-24
Authors: Reis, J., Mattevi, A.
PDB entry 8caq: Structure of Tau filaments Type I from Subacute Sclerosing Panencephalitis
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-01-24
Authors: Qi, C., Hasegawa, M., Takao, M., Sakai, M., Akagi, M., Iwasaki, Y., Yoshida, M., Scheres, S.H.W., Goedert, M.
PDB entry 8car: Discovery of the lanthipeptide Curvocidin and structural insights into its trifunctional synthetase CuvL
Classification: BIOSYNTHETIC PROTEIN
Source organism: Thermomonospora curvata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2023-01-24
Authors: Martins, B.M., Sigurdsson, A., Duettmann, A.A., Jasyk, M., Dimos-Roehl, B., Schoepf, F., Gemander, M., Knittel, C.H., Schegotzki, R., Schmid, B., Kosol, S., Pommerening, L., Gonzalez-Viegas, M., Seidel, M., Huegelland, M., Leimkuehler, S., Dobbek, H., Mainz, A., Suessmuth, R.
PDB entry 8cas: Cryo-EM structure of native Otu2-bound ubiquitinated 48S initiation complex (partial)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae W303
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-01-24
Authors: Ikeuchi, K., Buschauer, R., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 8cat: The NADPH binding site on beef liver catalase
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1984-11-15
Authors: Murthy, M.R.N., Reid III, T.J., Sicignano, A., Tanaka, N., Fita, I., Rossmann, M.G.
PDB entry 8cau: human alpha7 nicotinic receptor in complex with the C4 nanobody and nicotine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-01-24
Authors: Prevost, M.S., Barilone, N., Dejean de la Batie, G., Pons, S., Ayme, G., England, P., Gielen, M., Bontems, F., Pehau-Arnaudet, G., Maskos, U., Lafaye, P., Corringer, P.-J.
PDB entry 8cav: Discovery of the lanthipeptide Curvocidin and structural insights into its trifunctional synthetase CuvL
Classification: BIOSYNTHETIC PROTEIN
Source organism: Thermomonospora curvata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2023-01-24
Authors: Sigurdsson, A., Martins, B.M., Duettmann, S.A., Jasyk, M., Dimos-Roehl, B., Schoepf, F., Gemannter, M., Knittel, C.H., Schnegotyzki, R., Schmid, B., Kosol, S., Gonzalez-Viegas, M., Seidel, M., Huegelland, M., Leimkuehler, S., Dobbek, H., Mainz, A., Suessmuth, R.
PDB entry 8caw: PBP AccA from A. tumefaciens Bo542 in complex with agrocin84
Classification: TRANSPORT PROTEIN
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.256 Å
Deposited: 2023-01-24
Authors: Morera, S., Vigouroux, A., El Sahili, A.
PDB entry 8cax: Structure of Tau filaments Type II from Subacute Sclerosing Panencephalitis
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-01-24
Authors: Qi, C., Hasegawa, M., Takao, M., Sakai, M., Akagi, M., Iwasaki, Y., Yoshida, M., Scheres, S.H.W., Goedert, M.
PDB entry 8cay: PBP AccA from A. tumefaciens Bo542 in complex with Agrocinopine D-like
Classification: TRANSPORT PROTEIN
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.626 Å
Deposited: 2023-01-24
Authors: Morera, S., Vigouroux, A., Siragu, S.
PDB entry 8caz: empty 30S head
Classification: RIBOSOME
Source organism: Escherichia coli BW25113
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.11 Å
Deposited: 2023-01-24
Authors: Paternoga, H., Beckert, B., Wilson, D.N.
PDB entry 8cb0: Crystal structure of dehydrogenase domain of Cylindrospermum stagnale NADPH-Oxidase 5 (NOX5) in complex with M41 and NADP+
Classification: OXIDOREDUCTASE
Source organism: Cylindrospermum stagnale
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-01-24
Authors: Reis, J., Mattevi, A.
PDB entry 8cb1: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with N-PNT-DNM 15
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-01-25
Authors: Sulzenbacher, G., Roig-Zamboni, V., Overkleeft, H., Artola, M.
PDB entry 8cb2: A complex of cagX and cagY components of Helicobacter pylori type IV secretion system
Classification: PROTEIN TRANSPORT
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-01-25
Authors: Isupov, M.N., Jiang, M., Zhang, H., Wu, Y.
PDB entry 8cb3: SARS-CoV Macro domain complexed with 3-(N-morpholino)propanesulfonic acid
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.572 Å
Deposited: 2023-01-25
Authors: Morin, B., Ferron, F., Coutard, B., Canard, B., Marseilles Structural Genomics Program @ AFMB (MSGP)
PDB entry 8cb4: The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tripeptide Leu-Leu-Leu
Classification: TRANSCRIPTION
Source organism: Listeria monocytogenes; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2023-01-25
Authors: Oelker, M., Sauer-Eriksson, A.E.
PDB entry 8cb5: The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tripeptide Glu-Val-Phe
Classification: TRANSCRIPTION
Source organism: Listeria monocytogenes; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-01-25
Authors: Oelker, M., Sauer-Eriksson, A.E.
PDB entry 8cb6: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in covalent complex with TAMRA tagged 1,6-Epi-cylcophellitol aziridine activity based probe
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-01-25
Authors: Sulzenbacher, G., Roig-Zamboni, V., Overkleeft, H., Artola, M.
PDB entry 8cb7: The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tetrapeptide Glu-Val-Phe-Leu
Classification: TRANSCRIPTION
Source organism: Listeria monocytogenes; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-01-25
Authors: Oelker, M., Sauer-Eriksson, A.E.
PDB entry 8cb8: The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tetrapeptide Ser-Thr-Leu-Leu
Classification: TRANSCRIPTION
Source organism: Listeria monocytogenes; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-01-25
Authors: Oelker, M., Lindgren, C., Sauer-Eriksson, A.E.
PDB entry 8cb9: PBP AccA from A. tumefaciens Bo542 in complex with D-Glucose-2-phosphate
Classification: TRANSPORT PROTEIN
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2023-01-25
Authors: Morera, S., Vigouroux, A.
PDB entry 8cba: Crystal structure of N-terminal domain of TraF, protein of a type IV secretion system from E.faecalis (pIP501)
Classification: MEMBRANE PROTEIN
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-01-25
Authors: Berger, T.M.I., Stallinger, A., Pavkov-Keller, T., Keller, W.
PDB entry 8cbb: Structure of homodimeric luciferase from Enhygromyxa salina
Classification: LUMINESCENT PROTEIN
Source organism: Enhygromyxa salina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2023-01-25
Authors: Yudenko, A., Remeeva, A., Gushchin, I.
PDB entry 8cbc: Crystal structure of Thermothelomyces thermophila GH30 (double mutant EE) in complex with xylotriose.
Classification: HYDROLASE
Source organism: Thermothelomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-01-25
Authors: Dimarogona, M., Pentari, C., Kosinas, C., Topakas, E.
PDB entry 8cbd: SARS-CoV-2 Delta-RBD complexed with BA.4/5-1 and EY6A Fabs
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.52 Å
Deposited: 2023-01-25
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 8cbe: SARS-CoV-2 Delta-RBD complexed with BA.4/5-2 and Beta-49 Fabs
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2023-01-25
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 8cbf: SARS-CoV-2 Delta-RBD complexed with Omi-42 and Beta-49 Fabs
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2023-01-25
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 8cbg: The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tetrapeptide Arg-Gly-Leu-Leu
Classification: TRANSCRIPTION
Source organism: Listeria monocytogenes; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-01-25
Authors: Oelker, M., Sauer-Eriksson, A.E.
PDB entry 8cbh: SHP2 in complex with a novel allosteric inhibitor
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2023-01-25
Authors: di Fabio, R., Petrocchi, A.
PDB entry 8cbi: The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tetrapeptide Thr-Lys-Pro-Arg
Classification: TRANSCRIPTION
Source organism: Listeria monocytogenes; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-01-25
Authors: Oelker, M., Sauer-Eriksson, A.E.
PDB entry 8cbj: Cryo-EM structure of Otu2-bound cytoplasmic pre-40S ribosome biogenesis complex
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae W303
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-01-25
Authors: Ikeuchi, K., Buschauer, R., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 8cbk: Structure of human mitochondrial RNase P in complex with mitochondrial pre-tRNA-His(5,Ser)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2023-01-25
Authors: MEYNIER, V., HARDWICK, S., CATALA, M., ROSKE, J., OERUM, S., CHIRGADZE, D., BARRAUD, P., LUISI, B., TISNE, C.
PDB entry 8cbl: Structure of human mitochondrial RNase Z in complex with mitochondrial pre-tRNA-His(0,Ser)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-01-25
Authors: MEYNIER, V., HARDWICK, S., CATALA, M., ROSKE, J., OERUM, S., CHIRGADZE, D., BARRAUD, P., YU, W., LUISI, B., TISNE, C.
PDB entry 8cbm: Structure of human mitochondrial CCA-adding enzyme in complex with mitochondrial pre-tRNA-Ile
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2023-01-25
Authors: MEYNIER, V., HARDWICK, S., CATALA, M., ROSKE, J., OERUM, S., CHIRGADZE, D., BARRAUD, P., LUISI, B., TISNE, C.
PDB entry 8cbn: structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2023-01-25
Authors: Koutna, E., Kouba, T., Novacek, J., Veverka, V.
PDB entry 8cbo: Structure of human mitochondrial MRPP1-MRPP2 in complex with mitochondrial pre-tRNA-Ile
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-01-25
Authors: MEYNIER, V., HARDWICK, S., CATALA, M., ROSKE, J., OERUM, S., CHIRGADZE, D., BARRAUD, P., LUISI, B., TISNE, C.
PDB entry 8cbp: The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tetrapeptide Thr-Glu-Pro-Leu
Classification: TRANSCRIPTION
Source organism: Listeria monocytogenes; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-01-25
Authors: Hainzl, T., Oelker, M., Sauer-Eriksson, A.E.
PDB entry 8cbq: structure of LEDGF/p75 PWWP domain bound to the H3K36 trimethylated dinucleosome
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-01-25
Authors: Koutna, E., Kouba, T., Novacek, J., Veverka, V.
PDB entry 8cbr: HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor BDM-2
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-01-25
Authors: Singer, M.R., Pye, V.E., Yu, Z., Cherepanov, P.
PDB entry 8cbs: HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor MUT871
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-01-25
Authors: Singer, M.R., Pye, V.E., Yu, Z., Cherepanov, P.
PDB entry 8cbt: HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor MUT872
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-01-25
Authors: Singer, M.R., Pye, V.E., Yu, Z., Cherepanov, P.
PDB entry 8cbu: HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor MUT884
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2023-01-25
Authors: Singer, M.R., Pye, V.E., Yu, Z., Cherepanov, P.
PDB entry 8cbv: HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor MUT916
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-01-25
Authors: Singer, M.R., Pye, V.E., Yu, Z., Cherepanov, P.
PDB entry 8cbw: CryoEM structure of the Hendra henipavirus nucleocapsid sauronoid assembly monomer
Classification: VIRAL PROTEIN
Source organism: Escherichia coli BL21(DE3); Hendra henipavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.485 Å
Deposited: 2023-01-26
Authors: Passchier, T.C., Maskell, D.P., Edwards, T.A., Barr, J.N.
PDB entry 8cbx: Crystal Structure of Anti-Cortisol Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-26
Authors: Eronen, V., Rouvinen, J., Hakulinen, N.
PDB entry 8cby: Crystal Structure of Anti-cortisol Fab in Complex with Cortisol
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2023-01-26
Authors: Eronen, V., Rouvinen, J., Hakulinen, N.
PDB entry 8cbz: Crystal Structure of Anti-cortisol Fab in Complex with Corticosterone
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2023-01-26
Authors: Eronen, V., Rouvinen, J., Hakulinen, N.
PDB entry 8cc0: Crystal Structure of Anti-cortisol Fab in Complex with Cortisone
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-01-26
Authors: Eronen, V., Rouvinen, J., Hakulinen, N.
PDB entry 8cc1: Crystal Structure of Anti-cortisol Fab in Complex with Prednisolone
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-26
Authors: Eronen, V., Rouvinen, J., Hakulinen, N.
PDB entry 8cc2: Cathepsin B1 from Schistosoma mansoni in complex with gallinamide A
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-01-26
Authors: Rubesova, P., Brynda, J., Mares, M., Gerwick, W.H.
PDB entry 8cc3: Vibrio cholerae GbpA (LPMO domain)
Classification: CELL ADHESION
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.128 Å
Deposited: 2023-01-26
Authors: Montserrat-Canals, M., Sorensen, H.V., Cordara, G., Krengel, U.
PDB entry 8cc4: LasB bound to phosphonic acid based inhibitor
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-01-26
Authors: Mueller, R., Sikandar, A.
PDB entry 8cc5: Vibrio cholerae GbpA (LPMO domain)
Classification: CELL ADHESION
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2023-01-26
Authors: Montserrat-Canals, M., Sorensen, H.V., Cordara, G., Krengel, U.
PDB entry 8cc6: Mouse serotonin 5-HT3A receptor in complex with PZ-1922
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-01-26
Authors: Lopez-Sanchez, U., Nury, H.
PDB entry 8cc7: Mouse serotonin 5-HT3A receptor in complex with PZ-1939
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-01-26
Authors: Lopez-Sanchez, U., Nury, H.
PDB entry 8cca: The Fk1 domain of FKBP51 in complex with SAFit1
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2023-01-27
Authors: Meyners, C., Knaup, F.H., Walz, C.M., Hausch, F.
PDB entry 8ccb: The Fk1 domain of FKBP51 in complex with 2-(3-((1R)-1-(((2S)-1-(2-(5-chlorothiophen-2-yl)-2-cyclohexylacetyl)piperidine-2-carbonyl)oxy)-3-(3,4-dimethoxyphenyl)propyl)phenoxy)acetic acid
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-01-27
Authors: Meyners, C., Knaup, F.H., Walz, C.M., Hausch, F.
PDB entry 8ccc: The Fk1 domain of FKBP51 in complex with 2-(3-((R)-1-(((S)-1-((S)-2-(5-chlorothiophen-2-yl)propanoyl)piperidine-2-carbonyl)oxy)-3-(3,4-dimethoxyphenyl)propyl)phenoxy)acetic acid
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-01-27
Authors: Meyners, C., Knaup, F.H., Walz, C.M., Hausch, F.
PDB entry 8ccd: The Fk1 domain of FKBP51 in complex with 2-(3-((R)-1-(((S)-1-((S)-2-(5-chlorothiophen-2-yl)-2-(3,4,5-trimethoxyphenyl)acetyl)piperidine-2-carbonyl)oxy)-3-(3,4-dimethoxyphenyl)propyl)phenoxy)acetic acid
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-01-27
Authors: Meyners, C., Knaup, F.H., Walz, C.M., Hausch, F.
PDB entry 8cce: The Fk1 domain of FKBP51 in complex with 2-(3-((R)-1-(((S)-1-((S)-2-(5-chlorothiophen-2-yl)butanoyl)piperidine-2-carbonyl)oxy)-3-(3,4-dimethoxyphenyl)propyl)phenoxy)acetic acid
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-01-27
Authors: Meyners, C., Knaup, F.H., Walz, C.M., Hausch, F.
PDB entry 8ccf: The Fk1 domain of FKBP51 in complex with 2-(3-((R)-1-(((S)-1-((S)-2-(5-chlorothiophen-2-yl)pent-4-enoyl)piperidine-2-carbonyl)oxy)-3-(3,4-dimethoxyphenyl)propyl)phenoxy)acetic acid
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-27
Authors: Meyners, C., Knaup, F.H., Walz, C.M., Hausch, F.
PDB entry 8ccg: The Fk1 domain of FKBP51 in complex with (2R,5S,12S)-12-(thiophen-2-yl)-2-[2-(3,4-dimethoxyphenyl)ethyl]-15,15-dimethyl-3,19-dioxa-10,13,16-triazatricyclo[18.3.1.0^5,^10]tetracosa-1(24),20,22-triene-4,11,14,17-tetrone
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-01-27
Authors: Meyners, C., Knaup, F.H., Walz, C.M., Hausch, F.
PDB entry 8cch: The Fk1 domain of FKBP51 in complex with 2-(3-((1R)-1-(((2S)-1-(2-cyclohexyl-2-(thiophen-2-yl)acetyl)piperidine-2-carbonyl)oxy)-3-(3,4-dimethoxyphenyl)propyl)phenoxy)acetic acid
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2023-01-27
Authors: Meyners, C., Knaup, F.H., Walz, C.M., Hausch, F.
PDB entry 8cci: Crystal structure of Mycobacterium smegmatis thioredoxin reductase
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-01-27
Authors: Fuesser, F.T., Koch, O., Kuemmel, D.
PDB entry 8ccj: Crystal structure of Mycobacterium smegmatis thioredoxin reductase in complex with NADPH
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-01-27
Authors: Fuesser, F.T., Koch, O., Kuemmel, D.
PDB entry 8cck: Crystal structure of Mycobacterium smegmatis thioredoxin reductase in complex with fragment F2X-Entry H07
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-01-27
Authors: Fuesser, F.T., Koch, O., Kuemmel, D.
PDB entry 8ccl: Crystal structure of Mycobacterium smegmatis thioredoxin reductase in complex with fragment F2X-Entry A09
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-01-27
Authors: Fuesser, F.T., Koch, O., Kuemmel, D.
PDB entry 8ccm: Crystal structure of Mycobacterium smegmatis thioredoxin reductase in complex with Compound 2-06
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2023-01-27
Authors: Fuesser, F.T., Koch, O., Kuemmel, D.
PDB entry 8ccn: Filamentous actin II from Plasmodium falciparum
Classification: CELL INVASION
Source organism: Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-01-27
Authors: Kursula, I., Lopez, A.J.
PDB entry 8cco: JAS-stabilized F-ActinII from Plasmodium falciparum
Classification: CELL INVASION
Source organism: Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2023-01-27
Authors: Kursula, I., Lopez, A.J.
PDB entry 8ccq: Crystal structure of arsenite oxidase from Pseudorhizobium banfieldiae str. NT-26 (NT-26 Aio) bound to antimony trioxide
Classification: OXIDOREDUCTASE
Source organism: Pseudorhizobium banfieldiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2023-01-27
Authors: Engrola, F., Santos-Silva, T., Romao, M.J., Correia, M.A.S.
PDB entry 8ccr: Crystal structure of the T19D mutant of the de novo diheme binding 4D2
Classification: ELECTRON TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-01-27
Authors: Barringer, R., Anderson, R.
PDB entry 8ccs: 80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex
Classification: RIBOSOME
Source organism: Escherichia coli; Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.97 Å
Deposited: 2023-01-27
Authors: Milicevic, N., Jenner, L., Myasnikov, A., Yusupov, M., Yusupova, G.
PDB entry 8cct: Crystal structure of the human PXR ligand-binding domain in complex with 2,2'-dichloro bisphenol A
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-01-27
Authors: Derosa, Q., Grimaldi, M., Carivenc, C., Boulahtouf, A., Bourguet, W., Balaguer, P.
PDB entry 8ccu: Cathepsin B1 from Schistosoma mansoni in complex with gallinamide analog 1
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-01-27
Authors: Rubesova, P., Brynda, J., Gerwick, W.H., Mares, M.
PDB entry 8ccv: E. coli NfsB mutant T41LN71S with nicotinate
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-01-27
Authors: Day, M.A., White, S.A., Hyde, E.I., Searle, P.F.
PDB entry 8ccw: Crystal structure of human Sirt3 in complex with an acetylated HIV1 Tat-46-54 substrate peptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-01-27
Authors: Adolph, R.S., Steegborn, C.
PDB entry 8ccx: Human SOD1 in complex with S-XL6 cross-linker
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.665 Å
Deposited: 2023-01-27
Authors: Antonyuk, S.V., Hossain, A., Agar, J.N., Hasnain, S.S.
PDB entry 8ccy: Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium and 3'-phosphoadenosine-5'-phosphosulfate
Classification: CARBOHYDRATE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-01-28
Authors: Mycroft-West, C.J., Wu, L.
PDB entry 8ccz: Crystal structure of human Sirt3 in complex with an inhibiting HIV1 Tat-37-59 peptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-01-28
Authors: Adolph, R.S., Steegborn, C.
PDB entry 8cd0: Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nAb7 (composite map and model)
Classification: CARBOHYDRATE
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2023-01-29
Authors: Mycroft-West, C.J., Wu, L.
PDB entry 8cd1: 70S-PHIKZ014
Classification: RIBOSOME
Source organism: Pseudomonas aeruginosa PAO1; Pseudomonas phage phiKZ
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-01-29
Authors: Gerovac, M., Vogel, J.
PDB entry 8cd3: Crystal structure of human Scribble PDZ1 domain in complex with human TMIGD1
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-01-30
Authors: Maddumage, J.C., Kvansakul, M.
PDB entry 8cd4: structure of HEX-1 from N. crassa crystallized in cellulo (cytosol), diffracted at 100K and resolved using CrystFEL
Classification: STRUCTURAL PROTEIN
Source organism: Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-01-30
Authors: Boger, J., Schoenherr, R., Lahey-Rudolph, J.M., Harms, M., Kaiser, J., Nachtschatt, S., Wobbe, M., Koenig, P., Bourenkov, G., Schneider, T., Redecke, L.
PDB entry 8cd5: structure of HEX-1 from N. crassa crystallized in cellulo, diffracted at 100K and resolved using CrystFEL
Classification: STRUCTURAL PROTEIN
Source organism: Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-01-30
Authors: Boger, J., Schoenherr, R., Lahey-Rudolph, J.M., Harms, M., Kaiser, J., Nachtschatt, S., Wobbe, M., Koenig, P., Bourenkov, G., Schneider, T., Redecke, L.
PDB entry 8cd6: structure of HEX-1 (cyto V2) from N. crassa grown in living insect cells, diffracted at 100K and resolved using CrystFEL
Classification: STRUCTURAL PROTEIN
Source organism: Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-01-30
Authors: Boger, J., Schoenherr, R., Lahey-Rudolph, J.M., Harms, M., Kaiser, J., Nachtschatt, S., Wobbe, M., Koenig, P., Bourenkov, G., Schneider, T., Redecke, L.
PDB entry 8cd8: Ulilysin - C269A with AEBSF complex
Classification: HYDROLASE
Source organism: Escherichia coli; Methanosarcina acetivorans C2A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-01-30
Authors: Rodriguez-Banqueri, A., Eckhard, U., Gomis-Ruth, F.X.
PDB entry 8cd9: Cathepsin B1 from Schistosoma mansoni in complex with gallinamide analog 6
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-01-30
Authors: Rubesova, P., Brynda, J., Fanfrlik, J., Gerwick, W.H., Mares, M.
PDB entry 8cda: Crystal structure of MAB_4123 from Mycobacterium abscessus
Classification: UNKNOWN FUNCTION
Source organism: Mycobacteroides abscessus ATCC 19977
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-01-30
Authors: Ung, K.L., Poussineau, C., Couston, J., Alsarraf, H.M.A.B., Blaise, M.