LiteFold/PDB huggingface dataset:
PDB entry 2ocb: Crystal structure of human RAB9B in complex with a GTP analogue
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2006-12-20
Authors: Hong, B., Shen, L., Walker, J.R., Tempel, W., Landry, R., Arrowsmith, C.H., Edwards, A.M., Sundstrom, M., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 2occ: BOVINE HEART CYTOCHROME C OXIDASE AT THE FULLY OXIDIZED STATE
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1998-05-26
Authors: Tsukihara, T., Yao, M.
PDB entry 2ocd: Crystal structure of L-asparaginase I from Vibrio cholerae O1 biovar eltor str. N16961
Classification: HYDROLASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2006-12-20
Authors: Nocek, B., Wu, R., Osipiuk, J., Moy, S., Kim, Y., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2oce: Crystal structure of Tex family protein PA5201 from Pseudomonas aeruginosa
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2006-12-20
Authors: Jin, X., Min, T., Burley, S.K., Shapiro, L., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 2ocf: Human estrogen receptor alpha ligand-binding domain in complex with estradiol and the E2#23 FN3 monobody
Classification: HORMONE/GROWTH FACTOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2006-12-20
Authors: Rajan, S.S., Kuruvilla, S.M., Sharma, S.K., Kim, Y., Huang, J., Koide, A., Koide, S., Joachimiak, A., Greene, G.L.
PDB entry 2ocg: Crystal structure of human valacyclovir hydrolase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2006-12-20
Authors: Lai, L., Xu, Z., Amidon, G.L.
PDB entry 2och: J-domain of dnj-12 from Caenorhabditis elegans
Classification: CHAPERONE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2006-12-20
Authors: Osipiuk, J., Maltseva, N., Gu, M., Voisine, C., Morimoto, R.I., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2oci: Crystal structure of valacyclovir hydrolase complexed with a product analogue
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2006-12-20
Authors: Lai, L., Xu, Z., Amidon, G.L.
PDB entry 2ocj: Human p53 core domain in the absence of DNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2006-12-20
Authors: Wang, Y., Rosengarth, A., Luecke, H.
PDB entry 2ock: Crystal structure of valacyclovir hydrolase D123N mutant
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2006-12-20
Authors: Lai, L., Xu, Z., Amidon, G.L.
PDB entry 2ocl: Crystal structure of valacyclovir hydrolase S122A mutant
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2006-12-20
Authors: Lai, L., Xu, Z., Amidon, G.L.
PDB entry 2ocp: Crystal Structure of Human Deoxyguanosine Kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2006-12-21
Authors: Johansson, K., Ramaswamy, S., Ljungkrantz, C., Knecht, W., Piskur, J., Munch-Petersen, B., Eriksson, S., Eklund, H.
PDB entry 2ocs: The crystal structure of the first PDZ domain of human NHERF-2 (SLC9A3R2)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2006-12-21
Authors: Papagrigoriou, E., Phillips, C., Gileadi, C., Elkins, J., Salah, E., Berridge, G., Savitsky, P., Gorrec, F., Umeano, C., Ugochukwu, E., Gileadi, O., Burgess, N., Edwards, A., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Doyle, D.A., Structural Genomics Consortium (SGC)
PDB entry 2oct: Stefin B (Cystatin B) tetramer
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2006-12-21
Authors: Jenko Kokalj, S., Guncar, G., Turk, D.
PDB entry 2ocu: Structure of the complex of C-terminal lobe of bovine lactoferrin with N-(4-hydroxyphenyl) acetamide at 2.38 A resolution
Classification: METAL BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2006-12-21
Authors: Mir, R., Singh, N., Sinha, M., Sharma, S., Kaur, P., Singh, T.P.
PDB entry 2ocv: Structural basis of Na+ activation mimicry in murine thrombin
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2006-12-21
Authors: Marino, F., Chen, Z., Ergenekan, C.E., Bush, L.A., Mathews, F.S., Di Cera, E.
PDB entry 2ocw: Solution structure of human secretory component
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: SOLUTION SCATTERING
Deposited: 2006-12-21
Authors: Bonner, A., Perrier, C., Corthesy, B., Perkins, S.J.
PDB entry 2ocx: Crystal structure of Se-Met fucosyltransferase NodZ from Bradyrhizobium
Classification: TRANSFERASE
Source organism: Bradyrhizobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2006-12-21
Authors: Brzezinski, K., Stepkowski, T., Panjikar, S., Bujacz, G., Jaskolski, M.
PDB entry 2ocy: Complex of the guanine exchange factor Sec2p and the Rab GTPase Sec4p
Classification: ENDOCYTOSIS/EXOCYTOSIS
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2006-12-21
Authors: Reinisch, K.M., Dong, G.
PDB entry 2ocz: The Structure of a Putative 3-Dehydroquinate Dehydratase from Streptococcus pyogenes.
Classification: LYASE
Source organism: Streptococcus pyogenes serotype M1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2006-12-21
Authors: Cuff, M.E., Duggan, E., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2od0: The crystal structure of gene product VP1028 from Vibrio parahaemolyticus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2006-12-21
Authors: Zhang, R., Zhou, M., Moy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2od1: Solution structure of the MYND domain from human AML1-ETO
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2006-12-21
Authors: Liu, Y.Z., Chen, W., Gaudet, J., Cheney, M.D., Roudaia, L., Cierpicki, T., Klet, R.C., Hartman, K., Laue, T.M., Speck, N.A., Bushweller, J.H.
PDB entry 2od2: Crystal Structure of yHst2 I117F mutant bound to carba-NAD+ and an acetylated H4 peptide
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2006-12-21
Authors: Sanders, B.D.
PDB entry 2od3: Human thrombin chimera with human residues 184a, 186, 186a, 186b, 186c and 222 replaced by murine thrombin equivalents.
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2006-12-21
Authors: Marino, F., Chen, Z., Ergenekan, C.E., Bush, L.A., Mathews, F.S., Di Cera, E.
PDB entry 2od4: Crystal structure of a dimeric ferredoxin-like protein (jcvi_pep_1096665735785) from uncultured marine organism at 1.70 A resolution
Classification: UNKNOWN FUNCTION
Source organism: uncultured marine organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2006-12-21
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 2od5: CRYSTAL STRUCTURE OF A PUTATIVE NUCLEIC ACID BINDING PROTEIN (JCVI_PEP_1096688149193) FROM UNCULTURED MARINE ORGANISM AT 1.79 A RESOLUTION
Classification: DNA BINDING PROTEIN
Source organism: uncultured marine organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2006-12-21
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 2od6: Crystal structure of a dimeric ferredoxin-like protein (jcvi_pep_1096682647733) from uncultured marine organism at 1.85 A resolution
Classification: UNKNOWN FUNCTION
Source organism: uncultured marine organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2006-12-21
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 2od7: Crystal Structure of yHst2 bound to the intermediate analogue ADP-HPD, and and aceylated H4 peptide
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2006-12-21
Authors: Marmorstein, R.Q., Sanders, B.D.
PDB entry 2od8: Structure of a peptide derived from Cdc9 bound to PCNA
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2006-12-21
Authors: Chapados, B.R., Tainer, J.A.
PDB entry 2od9: Structural Basis for Nicotinamide Inhibition and Base Exchange in Sir2 Enzymes
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2006-12-21
Authors: Marmorstein, R., Sanders, B.D.
PDB entry 2oda: Crystal Structure of PSPTO_2114
Classification: PROTEIN BINDING
Source organism: Pseudomonas syringae pv. tomato
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2006-12-22
Authors: Peisach, E., Allen, K.N., Dunaway-Mariano, D., Wang, L., Burroughs, A.M., Aravind, L.
PDB entry 2odb: The crystal structure of human cdc42 in complex with the CRIB domain of human p21-activated kinase 6 (PAK6)
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2006-12-22
Authors: Ugochukwu, E., Yang, X., Elkins, J., Soundararajan, M., Pike, A.C.W., Eswaran, J., Burgess, N., Debreczeni, J.E., Sundstrom, M., Arrowsmith, C., Weigelt, J., Edwards, A., Gileadi, O., von Delft, F., Knapp, S., Doyle, D., Structural Genomics Consortium (SGC)
PDB entry 2odc: LEM-domain of the nuclear envelope protein emerin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2006-12-22
Authors: Clore, G.M., Cai, M.
PDB entry 2odd: Solution structure of the MYND domain from AML1-ETO complexed with SMRT, a corepressor
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2006-12-22
Authors: Liu, Y.Z., Chen, W., Gaudet, J., Cheney, M.D., Roudaia, L., Cierpicki, T., Klet, R.C., Hartman, K., Laue, T.M., Speck, N.A., Bushweller, J.H.
PDB entry 2ode: Crystal structure of the heterodimeric complex of human RGS8 and activated Gi alpha 3
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2006-12-22
Authors: Gileadi, C., Soundararajan, M., Turnbull, A.P., Elkins, J.M., Papagrigoriou, E., Pike, A.C.W., Bunkoczi, G., Gorrec, F., Umeano, C., von Delft, F., Weigelt, J., Edwards, A., Arrowsmith, C.H., Sundstrom, M., Doyle, D.A., Structural Genomics Consortium (SGC)
PDB entry 2odf: The crystal structure of gene product Atu2144 from Agrobacterium tumefaciens
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Agrobacterium tumefaciens str.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2006-12-22
Authors: Zhang, R., Xu, X., Zheng, H., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2odg: Complex of barrier-to-autointegration factor and LEM-domain of emerin
Classification: MEMBRANE PROTEIN, PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2006-12-22
Authors: Clore, G.M., Cai, M.
PDB entry 2odh: Restriction Endonuclease BCNI in the Absence of DNA
Classification: HYDROLASE
Source organism: Brevibacillus centrosporus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2006-12-22
Authors: Sokolowska, M., Kaus-Drobek, M., Czapinska, H., Tamulaitis, G., Szczepanowski, R.H., Urbanke, K., Siksnys, V., Bochtler, M.
PDB entry 2odi: Restriction Endonuclease BCNI-Cognate DNA Substrate Complex
Classification: Hydrolase/DNA
Source organism: Brevibacillus centrosporus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2006-12-22
Authors: Sokolowska, M., Kaus-Drobek, M., Czapinska, H., Tamulaitis, G., Szczepanowski, R.H., Urbanke, C., Siksnys, V., Bochtler, M.
PDB entry 2odj: Crystal structure of the outer membrane protein OprD from Pseudomonas aeruginosa
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2006-12-22
Authors: Biswas, S., van den Berg, B.
PDB entry 2odk: Putative prevent-host-death protein from Nitrosomonas europaea
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Nitrosomonas europaea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2006-12-22
Authors: Osipiuk, J., Skarina, T., Kagan, O., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2odl: Crystal structure of the HMW1 secretion domain from Haemophilus influenzae
Classification: CELL ADHESION
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2006-12-22
Authors: Yokoyama, T., Yeo, H.J.
PDB entry 2odm: Crystal structure of S. aureus YlaN, an essential leucine rich protein involved in the control of cell shape
Classification: UNKNOWN FUNCTION
Source organism: Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2006-12-23
Authors: Xu, L., Sedelnikova, S.E., Baker, P.J., Errington, J., Hunt, A., Rice, D.W.
PDB entry 2odn: MSRECA-dATP complex
Classification: RECOMBINATION
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2006-12-24
Authors: Krishna, R., Rajan Prabu, J., Manjunath, G.P., Datta, S., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2odo: Crystal structure of Pseudomonas Fluorescens alanine racemase
Classification: ISOMERASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2006-12-25
Authors: Tsuge, H., Ohnishi, K., Yokoigawa, K.
PDB entry 2odp: Complement component C2a, the catalytic fragment of C3- and C5-convertase of human complement
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2006-12-25
Authors: Narayana, S.V.L., Krishnan, V.
PDB entry 2odq: Complement component C2a, the catalytic fragment of C3- and C5-convertase of human complement
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2006-12-25
Authors: Narayana, S.V.L., Krishnan, V.
PDB entry 2odr: Methanococcus Maripaludis Phosphoseryl-tRNA synthetase
Classification: LIGASE
Source organism: Methanococcus maripaludis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.228 Å
Deposited: 2006-12-26
Authors: Steitz, T.A., Kamtekar, S.
PDB entry 2odt: Structure of human Inositol 1,3,4-trisphosphate 5/6-kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2006-12-26
Authors: Busam, R.D., Arrowsmith, C., Berglund, H., Collins, R., Edwards, A., Ericsson, U.B., Flodin, S., Flores, A., Hammarstrom, M., Holmberg, S.L., Johansson, I., Karlberg, T., Kotenyova, T., Moche, M., Nilsson, M.E., Nordlund, P., Nyman, T., Ogg, D., Sagemark, J., Sundstrom, M., Uppenberg, J., Van Den Berg, S., Weigelt, J., Persson, C., Thorsell, A.G., Hallberg, B.M., Structural Genomics Consortium (SGC)
PDB entry 2odu: Crystal structure of a fragment of the plakin domain of plectin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2006-12-27
Authors: de Pereda, J.M.
PDB entry 2odv: Crystal structure of a fragment of the plakin domain of plectin, Cys to Ala mutant.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2006-12-27
Authors: de Pereda, J.M.
PDB entry 2odw: MSrecA-ATP-GAMA-S complex
Classification: RECOMBINATION
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2006-12-27
Authors: Krishna, R., Rajan Prabu, J., Manjunath, G.P., Datta, S., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2odx: Solution structure of Zn(II)Cox4
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR
Deposited: 2006-12-27
Authors: Coyne III, J.H., Ciofi-Baffoni, S.
PDB entry 2ody: Thrombin-bound boophilin displays a functional and accessible reactive-site loop
Classification: BLOOD CLOTTING/BLOOD CLOTTING INHIBITOR
Source organism: Bos taurus; Rhipicephalus microplus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2006-12-27
Authors: Macedo-Ribeiro, S., Fuentes-Prior, P., Pereira, P.J.B.
PDB entry 2oe0: Crystal Structure of Mitochondrial Thioredoxin 3 from Saccharomyces cerevisiae
Classification: ELECTRON TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2006-12-27
Authors: Bao, R., Zhang, Y.R., Zhou, C.Z., Chen, Y.X.
PDB entry 2oe1: Crystal Structure of Mitochondrial Thioredoxin 3 from Saccharomyces cerevisiae (reduced form)
Classification: ELECTRON TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2006-12-28
Authors: Bao, R., Zhang, Y.R., Zhou, C.Z., Chen, Y.X.
PDB entry 2oe2: MSrecA-native-low humidity 95%
Classification: RECOMBINATION
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2006-12-28
Authors: Krishna, R., Rajan Prabu, J., Manjunath, G.P., Datta, S., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2oe3: Crystal Structure of Mitochondrial Thioredoxin 3 from Saccharomyces cerevisiae (oxidized form)
Classification: ELECTRON TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2006-12-28
Authors: Bao, R., Zhang, Y.R., Zhou, C.Z., Chen, Y.X.
PDB entry 2oe4: High Pressure Psuedo Wild Type T4 Lysozyme
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2006-12-28
Authors: Collins, M.D., Quillin, M.L., Matthews, B.W., Gruner, S.M.
PDB entry 2oe5: 1.5 A X-ray crystal structure of Apramycin complex with RNA fragment GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC containing the human ribosomal decoding A site: RNA construct with 3'-overhang
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2006-12-28
Authors: Hermann, T., Tereshko, V., Skripkin, E., Patel, D.J.
PDB entry 2oe6: 2.4A X-ray crystal structure of unliganded RNA fragment GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC containing the human ribosomal decoding A site: RNA construct with 5'-overhang
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2006-12-28
Authors: Hermann, T., Tereshko, V., Skripkin, E., Patel, D.J.
PDB entry 2oe7: High-Pressure T4 Lysozyme
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2006-12-28
Authors: Collins, M.D., Quillin, M.L., Matthews, B.W., Gruner, S.M.
PDB entry 2oe8: 1.8 A X-ray crystal structure of Apramycin complex with RNA fragment GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC containing the human ribosomal decoding A site: RNA construct with 5'-overhang
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2006-12-28
Authors: Hermann, T., Tereshko, V., Skripkin, E., Patel, D.J.
PDB entry 2oe9: High-pressure structure of pseudo-WT T4 Lysozyme
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2006-12-28
Authors: Collins, M.D., Quillin, M.L., Matthews, B.W., Gruner, S.M.
PDB entry 2oea: High-pressure structure of pseudo-WT T4 Lysozyme
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2006-12-28
Authors: Collins, M.D., Quillin, M.L., Matthews, B.W., Gruner, S.M.
PDB entry 2oeb: The crystal structure of gene product Af1862 from Archaeoglobus fulgidus
Classification: Structural genomics, unknown function
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2006-12-28
Authors: Zhang, R., Evdokimova, E., Kagan, O., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2oec: Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with 2,2'-anhydrouridine and potassium ion at 2.194A resolution
Classification: TRANSFERASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.194 Å
Deposited: 2006-12-29
Authors: Timofeev, V.I., Lashkov, A.A., Pavlyuk, B.P., Mikhailov, A.M.
PDB entry 2oed: GB3 solution structure obtained by refinement of X-ray structure with dipolar couplings
Classification: IMMUNE SYSTEM
Source organism: Streptococcus sp. 'group G'
Experimental method: SOLUTION NMR
Deposited: 2006-12-29
Authors: Ulmer, T.S., Ramirez, B.E., Delaglio, F., Bax, A., Grishaev, A.
PDB entry 2oee: yheA from Bacillus subtilis
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2006-12-29
Authors: Binkowski, T.A., Borovilos, M., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2oef: Open and Closed Structures of the UDP-Glucose Pyrophosphorylase from Leishmania major
Classification: TRANSFERASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2006-12-29
Authors: Steiner, T.
PDB entry 2oeg: Open and Closed Structures of the UDP-Glucose Pyrophosphorylase from Leishmania major
Classification: TRANSFERASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2006-12-29
Authors: Steiner, T.
PDB entry 2oeh: Determination of the Three-dimensional Structure of the Mrf2-DNA Complex Using Paramagnetic Spin Labeling
Classification: Transcription/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2006-12-29
Authors: Cai, S., Zhu, L., Zhang, Z.
PDB entry 2oei: Crystal structure of human FE65-WW domain in complex with human Mena peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2006-12-29
Authors: Meiyappan, M., Birrane, G., Ladias, J.A.A.
PDB entry 2oej: Crystal structure of a rubisco-like protein from Geobacillus kaustophilus (tetramutant form), liganded with phosphate ions
Classification: ISOMERASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2006-12-30
Authors: Fedorov, A.A., Imker, H.J., Fedorov, E.V., Almo, S.C., Gerlt, J.A.
PDB entry 2oek: Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ ions
Classification: ISOMERASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2006-12-30
Authors: Fedorov, A.A., Imker, H.J., Fedorov, E.V., Almo, S.C., Gerlt, J.A.
PDB entry 2oel: Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ and HCO3- ions
Classification: ISOMERASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2006-12-30
Authors: Fedorov, A.A., Imker, H.J., Fedorov, E.V., Almo, S.C., Gerlt, J.A.
PDB entry 2oem: Crystal structure of a rubisco-like protein from Geobacillus kaustophilus liganded with Mg2+ and 2,3-diketohexane 1-phosphate
Classification: ISOMERASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2006-12-30
Authors: Fedorov, A.A., Imker, H.J., Fedorov, E.V., Gerlt, J.A., Almo, S.C.
PDB entry 2oen: Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors glucose-6-phosphate and fructose-1,6-bisphosphate
Classification: TRANSCRIPTION
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 3.17 Å
Deposited: 2006-12-30
Authors: Schumacher, M.A., Seidel, G., Hillen, W., Brennan, R.G.
PDB entry 2oeo: Cryogenic crystal structure of Staphylococcal Nuclease variant truncated Delta+PHS I92D
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2006-12-30
Authors: Reynald, R.L., Lattman, E.E., Gittis, A.G.
PDB entry 2oep: MSrecA-ADP-complex
Classification: RECOMBINATION
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2006-12-31
Authors: Krishna, R., Rajan Prabu, J., Manjunath, G.P., Datta, S., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2oeq: Protein of Unknown Function (DUF964) from Bacillus stearothermophilus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2006-12-31
Authors: Kim, Y., Wu, R., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2oer: Probable Transcriptional Regulator from Pseudomonas aeruginosa
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2006-12-31
Authors: Kim, Y., Skarina, T., Kagan, O., Edwards, A., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2oes: MSrecA-native-SSB
Classification: RECOMBINATION
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2007-01-01
Authors: Krishna, R., Rajan Prabu, J., Manjunath, G.P., Datta, S., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2oeu: Full-length hammerhead ribozyme with Mn(II) bound
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-01
Authors: Martick, M., Scott, W.G.
PDB entry 2oev: Crystal structure of ALIX/AIP1
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2007-01-01
Authors: Fisher, R.D., Zhai, Q., Robinson, H., Hill, C.P.
PDB entry 2oew: Structure of ALIX/AIP1 Bro1 Domain
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2007-01-01
Authors: Fisher, R.D., Zhai, Q., Robinson, H., Hill, C.P.
PDB entry 2oex: Structure of ALIX/AIP1 V Domain
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2007-01-01
Authors: Fisher, R.D., Zhai, Q., Robinson, H., Hill, C.P.
PDB entry 2oey: Solution Structure of a Designed Spirocyclic Helical Ligand Binding at a Two-Base Bulge Site in DNA
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2007-01-01
Authors: Zhang, N., Lin, Y., Xiao, Z., Jones, G.B., Goldberg, I.H.
PDB entry 2oez: Protein of Unknown Function (DUF1342) from Vibrio parahaemolyticus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2007-01-02
Authors: Kim, Y., Volkart, L., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2of0: X-ray crystal structure of beta secretase complexed with compound 5
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2007-01-02
Authors: Patel, S.
PDB entry 2of1: Cryogenic crystal structure of the Staphylococcal Nuclease variant truncated Delta+PHS I92W
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2007-01-02
Authors: Reynald, R.L., Gittis, A.G.
PDB entry 2of2: crystal structure of furanopyrimidine 8 bound to lck
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-02
Authors: Martin, M.W.
PDB entry 2of3: TOG domain structure from C.elegans Zyg9
Classification: STRUCTURAL PROTEIN, CELL CYCLE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-01-02
Authors: Al-Bassam, J., Larsen, N.A., Hyman, A.A., Harrison, S.C.
PDB entry 2of4: crystal structure of furanopyrimidine 1 bound to lck
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2007-01-02
Authors: Martin, M.W.
PDB entry 2of5: Oligomeric Death Domain complex
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2007-01-02
Authors: Park, H.H., Logette, E., Raunser, S., Cuenin, S., Walz, T., Tschopp, J., Wu, H.
PDB entry 2of6: Structure of immature West Nile virus
Classification: VIRUS
Source organism: West Nile virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 24 Å
Deposited: 2007-01-02
Authors: Zhang, Y., Kaufmann, B., Chipman, P.R., Kuhn, R.J., Rossmann, M.G.
PDB entry 2of7: Structural Genomics, the crystal structure of a tetR-family transcriptional regulator from Streptomyces coelicolor A3
Classification: TRANSCRIPTION
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-01-02
Authors: Tan, K., Xu, X., Zheng, H., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2of8: Crystal structure of AVR4 (D39A/C122S)-BNA complex
Classification: LIGAND BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2007-01-03
Authors: Livnah, O., Hayouka, R., Eisenberg-Domovich, Y.
PDB entry 2of9: Crystal structure of apo AVR4 (D39A/C122S)
Classification: LIGAND BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2007-01-03
Authors: Livnah, O., Hayouka, R., Eisenberg-Domovich, Y.
PDB entry 2ofa: Crystal structure of apo AVR4 (R112L,C122S)
Classification: LIGAND BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2007-01-03
Authors: Livnah, O., Hayouka, R., Eisenberg-Domovich, Y.
PDB entry 2ofb: Crystal structure of AVR4 (R112L/C122S)-BNA complex
Classification: LIGAND BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2007-01-03
Authors: Livnah, O., Hayouka, R., Eisenberg-Domovich, Y.
PDB entry 2ofc: The crystal structure of Sclerotium rolfsii lectin
Classification: SUGAR BINDING PROTEIN
Source organism: Athelia rolfsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2007-01-03
Authors: Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G.
PDB entry 2ofd: The Crystal Structure of Sclerotium rolfsii lectin in complex with N-acetyl-D-galactosamine
Classification: SUGAR BINDING PROTEIN
Source organism: Athelia rolfsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2007-01-03
Authors: Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G.
PDB entry 2ofe: The Crystal structure of Sclerotium rolfsii lectin in complex with N-acetyl-D-glucosamine
Classification: SUGAR BINDING PROTEIN
Source organism: Athelia rolfsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-01-03
Authors: Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G.
PDB entry 2off: The crystal structure of Glycogen Phosphorylase b in complex with a potent allosteric inhibitor
Classification: TRANSFERASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-01-03
Authors: Tiraidis, C., Alexacou, K.-M., Zographos, S.E., Leonidas, D.D., Gimisis, T., Oikonomakos, N.G.
PDB entry 2ofg: Solution structure of the n-terminal domain of the zinc(II) ATPase ziaa in its apo form
Classification: HYDROLASE, MEMBRANE PROTEIN
Source organism: Synechocystis sp.
Experimental method: SOLUTION NMR
Deposited: 2007-01-03
Authors: Banci, L., Bertini, I., Ciofi-Baffoni, S., Poggi, L., Robinson, N.J., Vanarotti, M.
PDB entry 2ofh: Solution structure of the n-terminal domain of the zinc(II) ATPase ziaa in its apo form
Classification: HYDROLASE, MEMBRANE PROTEIN
Source organism: Synechocystis sp.
Experimental method: SOLUTION NMR
Deposited: 2007-01-03
Authors: Banci, L., Bertini, I., Ciofi-Baffoni, S., Poggi, L., Robinson, N.J., Vanarotti, M.
PDB entry 2ofi: Crystal Structure of 3-methyladenine DNA Glycosylase I (TAG) bound to DNA/3mA
Classification: 3-METHYLADENINE DNA GLYCOSYLASE I/DNA
Source organism: Salmonella typhi; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-01-03
Authors: Metz, A.H., Hollis, T., Eichman, B.F.
PDB entry 2ofj: Crystal structure of the E190A mutant of o-succinylbenzoate synthase from Escherichia coli
Classification: LYASE
Source organism: Escherichia coli str. K-12 substr.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-01-03
Authors: Nagatani, R.A., Gonzalez, A., Shoichet, B.K., Brinen, L.S., Babbitt, P.C.
PDB entry 2ofk: Crystal Structure of 3-methyladenine DNA glycosylase I (TAG)
Classification: HYDROLASE
Source organism: Salmonella typhi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2007-01-03
Authors: Metz, A.H., Hollis, T., Eichman, B.F.
PDB entry 2ofm: 1.11 A Crystal Structure of Apo Nitrophorin 4 From Rhodnius Prolixus
Classification: TRANSPORT PROTEIN
Source organism: Rhodnius prolixus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2007-01-03
Authors: Amoia, A.M.
PDB entry 2ofn: Solution structure of FK506-binding domain (FKBD)of FKBP35 from Plasmodium falciparum
Classification: ISOMERASE
Source organism: Plasmodium falciparum
Experimental method: SOLUTION NMR
Deposited: 2007-01-04
Authors: Kang, C.B., Ye, H., Yoon, H.R., Yoon, H.S.
PDB entry 2ofo: MSrecA-native
Classification: RECOMBINATION
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2007-01-04
Authors: Krishna, R., Rajan Prabu, J., Manjunath, G.P., Datta, S., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2ofp: Crystal structure of Escherichia coli ketopantoate reductase in a ternary complex with NADP+ and pantoate
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-01-04
Authors: Ciulli, A., Chirgadze, D.Y., Smith, A.G., Blundell, T.L., Abell, C.
PDB entry 2ofq: NMR Solution Structure of a complex between the VirB9/VirB7 interaction domains of the pKM101 type IV secretion system
Classification: PROTEIN TRANSPORT/PROTEIN TRANSPORT
Source organism: IncN plasmid R46
Experimental method: SOLUTION NMR
Deposited: 2007-01-04
Authors: Harris, R., Bayliss, R., Driscoll, P.C., Waksman, G.
PDB entry 2ofr: 1.00 A Crystal Structure Of V36A/D129A/L130A Mutant of Nitrophorin 4 From Rhodnius Prolixus Complexed With Nitric Oxide at pH 5.6
Classification: TRANSPORT PROTEIN
Source organism: Rhodnius prolixus
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2007-01-04
Authors: Amoia, A.M.
PDB entry 2ofs: Crystal structure of human CD59
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2007-01-04
Authors: Davies, C.
PDB entry 2ofu: x-ray crystal structure of 2-aminopyrimidine carbamate 43 bound to Lck
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-04
Authors: Huang, X.
PDB entry 2ofv: crystal structure of aminoquinazoline 1 bound to Lck
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-04
Authors: Huang, X.
PDB entry 2ofw: Crystal structure of the APSK domain of human PAPSS1 complexed with 2 APS molecules
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2007-01-04
Authors: Sekulic, N., Lavie, A.
PDB entry 2ofx: crystal structure of the APSK domain of human PAPSS1 in complex with ADPMg and PAPS
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-01-04
Authors: Sekulic, N., Lavie, A.
PDB entry 2ofy: Crystal structure of putative XRE-family transcriptional regulator from Rhodococcus sp.
Classification: TRANSCRIPTION
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-01-04
Authors: Shumilin, I.A., Skarina, T., Onopriyenko, O., Yim, V., Chruszcz, M., Cymborowski, M., Savchenko, A., Edwards, A., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 2ofz: Ultrahigh Resolution Crystal Structure of RNA Binding Domain of SARS Nucleopcapsid (N Protein) at 1.1 Angstrom Resolution in Monoclinic Form.
Classification: VIRAL PROTEIN
Source organism: SARS coronavirus Tor2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2007-01-04
Authors: Saikatendu, K., Joseph, J., Subramanian, V., Neuman, B., Buchmeier, M., Stevens, R.C., Kuhn, P.
PDB entry 2og0: Crystal Structure of the Lambda Xis-DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Enterobacteria phage lambda; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-01-04
Authors: Papagiannis, C.V., Sam, M.D., Abbani, M.A., Cascio, D., Yoo, D., Clubb, R.T., Johnson, R.C.
PDB entry 2og1: Crystal Structure of BphD, a C-C hydrolase from Burkholderia xenovorans LB400
Classification: HYDROLASE
Source organism: Burkholderia xenovorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-01-04
Authors: Dai, S., Ke, J., Bolin, J.T.
PDB entry 2og2: Crystal structure of chloroplast FtsY from Arabidopsis thaliana
Classification: PROTEIN TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-04
Authors: Chartron, J., Chandrasekar, S., Ampornpan, P.J., Shan, S.
PDB entry 2og3: structure of the rna binding domain of n protein from SARS coronavirus in cubic crystal form
Classification: VIRAL PROTEIN
Source organism: SARS coronavirus Tor2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-01-05
Authors: Saikatendu, K., Joseph, J., Subramanian, V., Neuman, B., Buchmeier, M., Stevens, R.C., Kuhn, P.
PDB entry 2og4: Structure of an expanded Jab1-MPN-like domain of splicing factor Prp8p from yeast
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-05
Authors: Pena, V., Liu, S., Luehrmann, R., Wahl, M.C.
PDB entry 2og5: Crystal structure of asparagine oxygenase (AsnO)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2007-01-05
Authors: Essen, L.O., Strieker, M.
PDB entry 2og6: Crystal structure of asparagine oxygenase in complex with Fe(II)
Classification: OXIDOREDUCTASE, ELECTRON TRANSPORT
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.916 Å
Deposited: 2007-01-05
Authors: Essen, L.-O., Strieker, M.
PDB entry 2og7: Cystal structure of asparagine oxygenase in complex with Fe(II), 2S,3S-3-hydroxyasparagine and succinate
Classification: OXIDOREDUCTASE, ELECTRON TRANSPORT
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2007-01-05
Authors: Essen, L.-O., Strieker, M.
PDB entry 2og8: crystal structure of aminoquinazoline 36 bound to Lck
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-01-05
Authors: Huang, X.
PDB entry 2og9: Crystal Structure of mandelate racemase/muconate lactonizing enzyme from Polaromonas sp. JS666
Classification: ISOMERASE
Source organism: Polaromonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-01-05
Authors: Kumaran, D., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 2oga: X-ray crystal structure of S. venezuelae DesV in complex with ketimine intermediate
Classification: HYDROLASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2007-01-05
Authors: Holden, H.M., Burgie, E.S.
PDB entry 2ogb: Crystal structure of the C-terminal domain of mouse Nrdp1
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2007-01-05
Authors: Bouyain, S., Leahy, D.J.
PDB entry 2ogd: T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-527
Classification: TRANSFERASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-05
Authors: Cao, R., Gao, Y., Robinson, H., Goddard, A., Oldfield, E.
PDB entry 2oge: x-ray structure of S. venezuelae DesV in its internal aldimine form
Classification: TRANSFERASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2007-01-05
Authors: Holden, H.M., Burgie, E.S.
PDB entry 2ogf: Crystal structure of protein MJ0408 from Methanococcus jannaschii, Pfam DUF372
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2007-01-05
Authors: Ramagopal, U.A., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 2ogg: Structure of B. subtilis trehalose repressor (TreR) effector binding domain
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-01-05
Authors: Rezacova, P., Krejcirikova, V., Borek, D., Moy, S.F., Joachimiak, A., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
PDB entry 2ogh: Solution structure of yeast eIF1
Classification: TRANSLATION
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR
Deposited: 2007-01-05
Authors: Reibarkh, M., del Rio, F., Yamamoto, Y., Asano, K., Wagner, G.
PDB entry 2ogi: Crystal structure of a putative metal dependent phosphohydrolase (sag1661) from streptococcus agalactiae serogroup v at 1.85 A resolution
Classification: HYDROLASE
Source organism: Streptococcus agalactiae serogroup V
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-01-05
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 2ogj: Crystal structure of a dihydroorotase
Classification: HYDROLASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2007-01-05
Authors: Sugadev, R., Kumaran, D., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 2ogk: Crystal structure of protein AF2318 from Archaeglobus fulgidus, Pfam DUF54
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2007-01-05
Authors: Rao, K.N., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 2ogm: The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-571519
Classification: RIBOSOME
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2007-01-07
Authors: Davidovich, C., Bashan, A., Auerbach-Nevo, T., Yonath, A.
PDB entry 2ogn: The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-280080
Classification: RIBOSOME
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.56 Å
Deposited: 2007-01-07
Authors: Davidovich, C., Bashan, A., Auerbach-Nevo, T., Yonath, A.
PDB entry 2ogo: The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative retapamulin (SB-275833)
Classification: RIBOSOME
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.66 Å
Deposited: 2007-01-07
Authors: Davidovich, C., Bashan, A., Auerbach-Nevo, T., Yonath, A.
PDB entry 2ogp: Solution structure of the second PDZ domain of Par-3
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: SOLUTION NMR
Deposited: 2007-01-07
Authors: Feng, W., Wu, H., Chen, J., Chan, L.-N., Zhang, M.
PDB entry 2ogq: Molecular and structural basis of Plk1 substrate recognition: Implications in centrosomal localization
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2007-01-08
Authors: Garcia-Alvarez, B., de Carcer, G., Ibanez, S., Bragado-Nilsson, E., Montoya, G.
PDB entry 2ogr: Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution
Classification: FLUORESCENT PROTEIN
Source organism: Zoanthus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-01-08
Authors: Pletneva, N.V., Pletnev, S.V., Tikhonova, T.V., Pletnev, V.Z.
PDB entry 2ogs: Crystal Structure of the GEOBACILLUS STEAROTHERMOPHILUS Carboxylesterase EST55 at pH 6.2
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2007-01-08
Authors: Liu, P., Ewis, H.E., Tai, P.C., Lu, C.D., Weber, I.T.
PDB entry 2ogt: Crystal Structure of the Geobacillus Stearothermophilus Carboxylesterase EST55 at pH 6.8
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2007-01-08
Authors: Liu, P., Ewis, H.E., Tai, P.C., Lu, C.D., Weber, I.T.
PDB entry 2ogu: Crystal structure of the isolated MthK RCK domain
Classification: METAL BINDING PROTEIN
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.23 Å
Deposited: 2007-01-08
Authors: Kuo, M.M.C., Baker, K.A., Wong, L., Choe, S.
PDB entry 2ogv: Crystal Structure of the Autoinhibited Human c-Fms Kinase Domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2007-01-09
Authors: Walter, M., Lucet, I.S., Patel, O., Broughton, S.E., Bamert, R., Williams, N.K., Fantino, E., Wilks, A.F., Rossjohn, J.
PDB entry 2ogw: Structure of ABC type zinc transporter from E. coli
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2007-01-09
Authors: Sharma, A., Yogavel, M.
PDB entry 2ogx: The crystal structure of the molybdenum storage protein from Azotobacter vinelandii loaded with polyoxotungstates (WSto)
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-01-09
Authors: Schemberg, J., Warkentin, E., Ermler, U.