LiteFold/PDB huggingface dataset:
PDB entry 6p29: N-demethylindolmycin synthase (PluN2) in complex with N-demethylindolmycin
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudoalteromonas luteoviolacea strain HI1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-05-21
Authors: Du, Y.L., Higgins, M.A., Zhao, G., Ryan, K.S.
PDB entry 6p2a: Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Pseudomonas phage OBP
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-05-21
Authors: Buth, S.A., Shneider, M.M., Leiman, P.G.
PDB entry 6p2b: Tethered PXR-LBD/SRC-1p bound to Garcinoic Acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-05-21
Authors: Walton, W.G., Pellock, S.J., Redinbo, M.R.
PDB entry 6p2c: Structure of a nested set of N-terminally extended MHC I-peptides provides novel insights into antigen processing and presentation
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.396 Å
Deposited: 2019-05-21
Authors: Li, L., Batliwala, M., Bouvier, M.
PDB entry 6p2d: Structure of mouse ketohexokinase-C in complex with fructose and ADP
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2019-05-21
Authors: Gasper, W.C., Allen, K.N., Tolan, D.R.
PDB entry 6p2e: Structure of Aedes aegypti OBP22 in the complex with benzaldehyde
Classification: TRANSPORT PROTEIN
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-05-21
Authors: Jones, D.N., Murphy, E.
PDB entry 6p2f: Structure of a nested set of N-terminally extended MHC I-peptides provides novel insights into antigen processing and presentation
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.482 Å
Deposited: 2019-05-21
Authors: Li, L., Batliwala, M., Bouvier, M.
PDB entry 6p2g: Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and D-ddCTP
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate HXB2); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2019-05-21
Authors: Bertoletti, N., Anderson, K.S.
PDB entry 6p2h: Structural basis for 2'-deoxyguanosine recognition by the 2'-dG-II class of riboswitches
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.803 Å
Deposited: 2019-05-21
Authors: Matyjasik, M.M., Batey, R.T.
PDB entry 6p2i: Acyclic imino acid reductase (Bsp5) in complex with NADPH and D-Arg
Classification: oxidoreductase, biosynthetic protein
Source organism: Bacillus sp. 5mfcol3.1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2019-05-21
Authors: Guo, J., Higgins, M.A., Daniel-Ivad, P., Ryan, K.S.
PDB entry 6p2j: Dimeric structure of ACAT1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2019-05-21
Authors: Yan, N., Qian, H.W.
PDB entry 6p2k: Crystal structure of AFV00434, an ancestral GH74 enzyme
Classification: HYDROLASE
Source organism: Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-05-21
Authors: Stogios, P.J., Skarina, T., Arnal, G., Brumer, H., Savchenko, A.
PDB entry 6p2l: Crystal structure of Niastella koreensis GH74 (NkGH74) enzyme
Classification: HYDROLASE
Source organism: Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2019-05-21
Authors: Stogios, P.J., Skarina, T., Arnal, G., Brumer, H., Savchenko, A.
PDB entry 6p2m: Crystal structure of the Caldicellulosiruptor lactoaceticus GH74 (ClGH74a) enzyme in complex with LLG xyloglucan
Classification: HYDROLASE
Source organism: Caldicellulosiruptor lactoaceticus 6A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2019-05-21
Authors: Stogios, P.J., Skarina, T., Arnal, G.
PDB entry 6p2n: Crystal structure of Paenibacillus graminis GH74 (PgGH74)
Classification: HYDROLASE
Source organism: Paenibacillus graminis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2019-05-21
Authors: Stogios, P.J.
PDB entry 6p2o: Crystal structure of Streptomyces rapamycinicus GH74 in complex with xyloglucan fragments XLLG and XXXG
Classification: HYDROLASE
Source organism: Streptomyces rapamycinicus (strain ATCC 29253 / DSM 41530 / NRRL 5491 / AYB-994)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2019-05-21
Authors: Stogios, P.J., Skarina, T., Arnal, G., Brumer, H., Savchenko, A.
PDB entry 6p2p: Tetrameric structure of ACAT1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-05-21
Authors: Yan, N., Qian, H.W.
PDB entry 6p2r: Structure of S. cerevisiae protein O-mannosyltransferase Pmt1-Pmt2 complex bound to the sugar donor
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae W303
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-05-21
Authors: Bai, L., Li, H.
PDB entry 6p2s: Structure of a nested set of N-terminally extended MHC I-peptides provide novel insights into antigen processing and presentation
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-05-22
Authors: Li, L., Batliwala, M., Bouvier, M.
PDB entry 6p2t: BshB from Bacillus subtilis complexed with citrate
Classification: HYDROLASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.853 Å
Deposited: 2019-05-22
Authors: Cook, P.D., Meloche, C.E.
PDB entry 6p2u: Structure of Mortalin-NBD with N6-propargyladenosine-5'-diphosphate
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-05-22
Authors: Moseng, M.A., Page, R.C.
PDB entry 6p2v: RebH Variant 10S, Tryptamine 5-halogenase
Classification: FLAVOPROTEIN
Source organism: Lechevalieria aerocolonigenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.553 Å
Deposited: 2019-05-22
Authors: Andorfer, M.C., Sukumar, N., Lewis, J.C.
PDB entry 6p35: 2.5 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with 2-keto arginine and NADP
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli (strain B / BL21-DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.495 Å
Deposited: 2019-05-22
Authors: Vuksanovic, N., Silvaggi, N.R.
PDB entry 6p38: Crystal Structure Analysis of TAF1 Bromodomain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-05-23
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 6p39: Crystal Structure Analysis of TAF1 Bromodomain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.941 Å
Deposited: 2019-05-23
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 6p3a: Crystal Structure Analysis of TAF1 Bromodomain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2019-05-23
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 6p3b: Crystal structure of the anti-HIV antibody DH501 unmutated common ancestor (UCA)
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2019-05-23
Authors: Nicely, N.I., Saunders, K.O.
PDB entry 6p3c: E. coli fumarase mutant - T187A
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.459 Å
Deposited: 2019-05-23
Authors: May, J.F., Bhattcharyya, B., Weaver, T.M.
PDB entry 6p3d: The co-crystal structure of BRAF(V600E) with ponatinib
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2019-05-23
Authors: Agianian, B., Gavathiotis, E.
PDB entry 6p3e: Mobile loops and electrostatic interactions maintain the flexible lambda tail tube
Classification: VIRAL PROTEIN
Source organism: Escherichia phage lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.4 Å
Deposited: 2019-05-23
Authors: Campbell, P., Duda, R.L., Nassur, J., Hendrix, R.W., Conway, J.F., Huet, A.
PDB entry 6p3h: Crystal structure of LigU(K66M) bound to substrate
Classification: ISOMERASE
Source organism: Novosphingobium sp. (strain KA1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2019-05-23
Authors: Cory, S.A., Hogancamp, T.N., Raushel, F.M., Barondeau, D.P.
PDB entry 6p3i: The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg
Classification: BIOSYNTHETIC PROTEIN
Source organism: Eleftheria terrae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-05-23
Authors: Tan, K., Zhou, M., Jedrzejczak, R., Babnigg, G., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6p3j: Crystal structure of LigU
Classification: ISOMERASE
Source organism: Novosphingobium sp. (strain KA1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2019-05-23
Authors: Cory, S.A., Hogancamp, T.N., Raushel, F.M., Barondeau, D.P.
PDB entry 6p3k: Crystal structure of LigU(C100S)
Classification: ISOMERASE
Source organism: Novosphingobium sp. (strain KA1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2019-05-23
Authors: Cory, S.A., Hogancamp, T.N., Raushel, F.M., Barondeau, D.P.
PDB entry 6p3l: Crystal Structure of Ketosteroid Isomerase from Mycobacterium hassiacum (mhKSI)
Classification: ISOMERASE
Source organism: Mycobacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.571 Å
Deposited: 2019-05-23
Authors: Yabukarski, F., Doukov, T., Pinney, M., Herschlag, D.
PDB entry 6p3m: Tetrahydroprotoberberine N-methyltransferase in complex with S-adenosylhomocysteine
Classification: TRANSFERASE
Source organism: Glaucium flavum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-05-24
Authors: Lang, D.E., Morris, J.S., Rowley, M., Torres, M.A., Maksimovich, V.A., Facchini, P.J., Ng, K.K.S.
PDB entry 6p3n: Tetrahydroprotoberberine N-methyltransferase in complex with S-adenosylmethionine
Classification: TRANSFERASE
Source organism: Glaucium flavum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-05-24
Authors: Lang, D.E., Morris, J.S., Rowley, M., Torres, M.A., Maksimovich, V.A., Facchini, P.J., Ng, K.K.S.
PDB entry 6p3o: Tetrahydroprotoberberine N-methyltransferase in complex with (S)-cis-N-methylstylopine and S-adenosylhomocysteine
Classification: TRANSFERASE
Source organism: Glaucium flavum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-05-24
Authors: Lang, D.E., Morris, J.S., Rowley, M., Torres, M.A., Maksimovich, V.A., Facchini, P.J., Ng, K.K.S.
PDB entry 6p3p: Crystal structure of Mcl-1 in complex with compound 65
Classification: APOPTOSIS/APOPTOSIS INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2019-05-24
Authors: Toms, A.V., Follows, B.
PDB entry 6p3q: Calpain-5 (CAPN5) Protease Core (PC)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-05-24
Authors: Velez, G., Sun, Y.J., Khan, S., Yang, J., Koster, H.J., Lokesh, G., Mahajan, V.
PDB entry 6p3r: crystal structure of human Fab H5.31 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (A/chicken/Vietnam/32/2004(H5N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-05-24
Authors: Dong, J., Crowe, J.E.
PDB entry 6p3s: Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (A/chicken/Vietnam/32/2004(H5N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2019-05-24
Authors: Dong, J., Crowe, J.E.
PDB entry 6p3t: Crystal structure of Eis from Mycobacterium tuberculosis in complex with inhibitor SGT449
Classification: transferase/transferase inhibitor
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-05-24
Authors: Punetha, A., Garneau-Tsodikova, S., Tsodikov, O.V.
PDB entry 6p3u: Crystal structure of Eis from Mycobacterium tuberculosis in complex with inhibitor SGT335
Classification: transferase/transferase inhibitor
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2019-05-24
Authors: Punetha, A., Garneau-Tsodikova, S., Tsodikov, O.V.
PDB entry 6p3v: Crystal structure of Eis from Mycobacterium tuberculosis in complex with inhibitor SGT416
Classification: transferase/transferase inhibitor
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-05-24
Authors: Punetha, A., Garneau-Tsodikova, S., Tsodikov, O.V.
PDB entry 6p3w: Crystal structure of the Cyclin A-CDK2-ORC1 complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2019-05-24
Authors: Wang, B., Song, J.
PDB entry 6p3x: Crystal Structure of Full Length APOBEC3G E/Q (pH 7.0)
Classification: RNA BINDING PROTEIN
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2019-05-25
Authors: Yang, H.J., Li, S.X., Chen, X.S.
PDB entry 6p3y: Crystal Structure of Full Length APOBEC3G E/Q (pH 7.4)
Classification: RNA BINDING PROTEIN
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2019-05-25
Authors: Yang, H.J., Li, S.X., Chen, X.S.
PDB entry 6p3z: Crystal Structure of Full Length APOBEC3G E/Q (pH 5.2)
Classification: RNA BINDING PROTEIN
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.844 Å
Deposited: 2019-05-25
Authors: Yang, H.J., Li, S.X., Chen, X.S.
PDB entry 6p40: Crystal Structure of Full Length APOBEC3G FKL
Classification: RNA BINDING PROTEIN
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.452 Å
Deposited: 2019-05-25
Authors: Yang, H.J., Li, S.X., Chen, X.S.
PDB entry 6p41: Yeast cytochrome c peroxidase (W191Y:L232E) in complex with iso-1 cytochrome c
Classification: Electron transport/Oxidoreductase
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2019-05-25
Authors: Yee, E.F., Crane, B.R.
PDB entry 6p42: Yeast cytochrome c peroxidase (W191Y:L232H) in complex with iso-1 cytochrome c
Classification: Electron transport/Oxidoreductase
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.905 Å
Deposited: 2019-05-25
Authors: Yee, E.F., Crane, B.R.
PDB entry 6p43: Yeast cytochrome c peroxidase in complex with iso-1 cytochrome c (Y48K)
Classification: Electron transport/Oxidoreductase
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.913 Å
Deposited: 2019-05-25
Authors: Yee, E.F., Crane, B.R.
PDB entry 6p44: Crystal Structure of Ketosteroid Isomerase D38N mutant from Mycobacterium hassiacum (mhKSI) bound to 3,4-dinitrophenol
Classification: ISOMERASE
Source organism: Mycobacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.251 Å
Deposited: 2019-05-25
Authors: Yabukarski, F., Doukov, T., Pinney, M., Herschlag, D.
PDB entry 6p45: Crystal structure of the G-quadruplex formed by (TGGGT)4 in complex with N-methylmesoporphryin IX
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.339 Å
Deposited: 2019-05-26
Authors: Yatsunyk, L.A., Lin, L.Y.
PDB entry 6p46: Cryo-EM structure of TMEM16F in digitonin with calcium bound
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2019-05-26
Authors: Feng, S., Dang, S., Han, T.W., Ye, W., Jin, P., Cheng, T., Li, J., Jan, Y.N., Jan, L.Y., Cheng, Y.
PDB entry 6p47: Cryo-EM structure of TMEM16F in digitonin without calcium
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-05-26
Authors: Feng, S., Dang, S., Han, T.W., Ye, W., Jin, P., Cheng, T., Li, J., Jan, Y.N., Jan, L.Y., Cheng, Y.
PDB entry 6p48: Cryo-EM structure of calcium-bound TMEM16F in nanodisc with supplement of PIP2 in Cl1
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-05-26
Authors: Feng, S., Dang, S., Han, T.W., Ye, W., Jin, P., Cheng, T., Li, J., Jan, Y.N., Jan, L.Y., Cheng, Y.
PDB entry 6p49: Cryo-EM structure of calcium-bound TMEM16F in nanodisc with supplement of PIP2 in Cl2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-05-26
Authors: Feng, S., Dang, S., Han, T.W., Ye, W., Jin, P., Cheng, T., Li, J., Jan, Y.N., Jan, L.Y., Cheng, Y.
PDB entry 6p4a: HyHEL10 Fab complexed with hen egg lysozyme carrying two mutations (HEL2x-rigid): R21Q and R73E
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Gallus gallus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-05-27
Authors: Langley, D.B., Christ, D.
PDB entry 6p4b: HyHEL10 fab variant HyHEL10-4x (heavy chain mutations L4F, Y33H, S56N, and Y58F) bound to hen egg lysozyme variant HEL2x-flex (mutations R21Q, R73E, C76S, and C94S)
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Gallus gallus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-05-27
Authors: Langley, D.B., Christ, D.
PDB entry 6p4c: HyHEL10 Fab carrying four heavy chain mutations (HyHEL10-4x): L4F, Y33H, S56N, and Y58F
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-05-27
Authors: Langley, D.B., Christ, D.
PDB entry 6p4d: Hen egg lysozyme (HEL) containing three point mutations (HEL3x): R21Q, R73E, and D101R
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2019-05-27
Authors: Langley, D.B., Christ, D.
PDB entry 6p4e: Leishmania mexicana CPB in complex with an aza-nitrile inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Leishmania mexicana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2019-05-27
Authors: Ribeiro, J.F.R., Li, C., De Vita, D., Emsley, J., Montanari, C.A.
PDB entry 6p4f: Crystal structure of the XPB-Bax1-forked DNA ternary complex
Classification: HYDROLASE/DNA
Source organism: Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2019-05-27
Authors: He, F., Hilario, E., Fan, L.
PDB entry 6p4g: Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1)
Classification: RIBOSOME
Source organism: Israeli acute paralysis virus; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-05-27
Authors: Acosta-Reyes, F.J., Neupane, R., Frank, J., Fernandez, I.S.
PDB entry 6p4h: Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 2)
Classification: RIBOSOME
Source organism: Israeli acute paralysis virus; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-05-27
Authors: Acosta-Reyes, F.J., Neupane, R., Frank, J., Fernandez, I.S.
PDB entry 6p4i: Photoactive Yellow Protein PYP 10ps
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-05-27
Authors: Pandey, S., Schmidt, M.
PDB entry 6p4j: Mouse norovirus complexed with GCDCA
Classification: VIRUS
Source organism: Murine norovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-05-27
Authors: Smith, T.J., Smith, T.J.
PDB entry 6p4k: mouse norovirus complexed with TCA
Classification: VIRUS
Source organism: Murine norovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-05-27
Authors: Smith, T.J.
PDB entry 6p4l: Bile salts alter the mouse norovirus capsid conformation; possible implications for cell attachment and immune evasion.
Classification: VIRUS
Source organism: Murine norovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-05-28
Authors: Smith, T.J.
PDB entry 6p4m: Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans
Classification: TOXIN
Source organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
Experimental method: X-RAY DIFFRACTION
Resolution: 1.802 Å
Deposited: 2019-05-28
Authors: Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.
PDB entry 6p4n: Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans
Classification: TOXIN
Source organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-05-28
Authors: Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.
PDB entry 6p4o: Complex of XPB helicase with Bax1 endonuclease from Sulfurisphaera tokodaii at 3.15 Angstroms resolution
Classification: HYDROLASE/DNA BINDING PROTEIN
Source organism: Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2019-05-28
Authors: Fan, L., DuPrez, K.T.
PDB entry 6p4p: Salmonella typhi PltB Homopentamer N29K Mutant
Classification: TOXIN
Source organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-05-28
Authors: Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.
PDB entry 6p4q: Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans
Classification: TOXIN
Source organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2019-05-28
Authors: Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.
PDB entry 6p4r: Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc glycans
Classification: TOXIN
Source organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2019-05-28
Authors: Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.
PDB entry 6p4s: Salmonella typhi PltB Homopentamer T65I Mutant
Classification: TOXIN
Source organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-05-28
Authors: Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.
PDB entry 6p4t: Salmonella typhi PltB Homopentamer T65I Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans
Classification: TOXIN
Source organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2019-05-28
Authors: Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.
PDB entry 6p4u: The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg and AMP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Eleftheria terrae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-05-28
Authors: Tan, K., Zhou, M., Jedrzejczak, R., Babnigg, G., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6p4v: 1.65 Angstrom ternary complex of Deoxyhypusine synthase with cofactor NAD and spermidine mimic inhibitor GC7
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-05-28
Authors: Klein, M.G., Ambrus-Aikelin, G.
PDB entry 6p4w: XPB helicase in a complex with truncated Bax1 from Sulfurisphaera tokodaii at 2.96 Angstrom resolution
Classification: HYDROLASE/DNA BINDING PROTEIN
Source organism: Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.956 Å
Deposited: 2019-05-28
Authors: Fan, L., He, F., DuPrez, K.T.
PDB entry 6p4x: Crystal Structure of the S. cerevisiae glucokinase, Glk1
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.59 Å
Deposited: 2019-05-28
Authors: Stoddard, P.R., Garner, E.C., Murray, A.W.
PDB entry 6p4y: Crystal Structure of anti-IL-7Ralpha 4A10 Fab
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2019-05-29
Authors: Walsh, S.T.R., Kashi, L., Kohnhorst, C.L.
PDB entry 6p4z: Structure of gadolinium-caged cobalt (III) insulin hexamer
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-05-29
Authors: Tran, T.H., Taylor, S.K., Stojanovic, M.N., Tong, L.
PDB entry 6p50: Crystal Structure of a Complex of human IL-7Ralpha with an anti-IL-7Ralpha Fab 4A10
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2019-05-29
Authors: Walsh, S.T.R., Kashi, L., Kohnhorst, C.L.
PDB entry 6p52: Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae with a bound phosphate at the active site
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2019-05-29
Authors: Singh, A., Davies, C.
PDB entry 6p53: Crystal structure of the transpeptidase domain of PBP2 from Neisseria gonorrhoeae in apo form
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2019-05-29
Authors: Singh, A., Davies, C.
PDB entry 6p54: Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae acylated by ceftriaxone
Classification: HYDROLASE/ANTIBIOTIC
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2019-05-29
Authors: Singh, A., Davies, C.
PDB entry 6p55: Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae acylated by cefixime
Classification: HYDROLASE/ANTIBIOTIC
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2019-05-29
Authors: Singh, A., Davies, C.
PDB entry 6p56: Crystal structure of the transpeptidase domain of a T498A mutant of PBP2 from Neisseria gonorrhoeae
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2019-05-29
Authors: Singh, A., Davies, C.
PDB entry 6p57: Crystal Structure of the Beta Subunit of Luteinizing Hormone
Classification: HORMONE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2019-05-29
Authors: McPherson, A.
PDB entry 6p58: Dark and Steady State-Illuminated Crystal Structure of Cyanobacteriochrome Receptor PixJ at 150K
Classification: SIGNALING PROTEIN
Source organism: Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.499 Å
Deposited: 2019-05-29
Authors: Clinger, J.A., Miller, M.D., Buirgie, E.S., Vierstra, R.D., Phillips Jr., G.N.
PDB entry 6p59: Crystal structure of SIVrcm Vif-CBFbeta-ELOB-ELOC complex
Classification: viral protein/immune system
Source organism: Homo sapiens; Simian immunodeficiency virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94221 Å
Deposited: 2019-05-29
Authors: Binning, J.M., Chesarino, N.M., Emerman, M., Gross, J.D.
PDB entry 6p5a: Drosophila P element transposase strand transfer complex
Classification: TRANSFERASE/DNA
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2019-05-30
Authors: Kellogg, E.H., Nogales, E., Ghanim, G., Rio, D.C.
PDB entry 6p5b: Crystal Structure of MavC in Complex with Ub-UbE2N
Classification: TRANSFERASE
Source organism: Homo sapiens; Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.099 Å
Deposited: 2019-05-30
Authors: Puvar, K., Iyer, S., Negron Teron, K.I., Das, C.
PDB entry 6p5c: Bacillus Fragment DNA polymerase mutant I716M
Classification: REPLICATION/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-05-30
Authors: Wu, E.Y.
PDB entry 6p5d: Photoactive Yellow Protein PYP 30ps
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-05-30
Authors: Pandey, S., Schmidt, M.
PDB entry 6p5e: Photoactive Yellow Protein PYP 80ps
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-05-30
Authors: Pandey, S., Schmidt, M.
PDB entry 6p5f: Photoactive Yellow Protein PYP Pure Dark
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-05-30
Authors: Pandey, S., Schmidt, M.
PDB entry 6p5g: Photoactive Yellow Protein PYP Dark Full
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-05-30
Authors: Pandey, S., Schmidt, M.
PDB entry 6p5h: Structure of MavC middle insertion domain
Classification: PROTEIN BINDING
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2019-05-30
Authors: Negron Teron, K.I., Puvar, K., Iyer, S., Das, C.
PDB entry 6p5i: Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)
Classification: RIBOSOME
Source organism: Israeli acute paralysis virus; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-05-30
Authors: Acosta-Reyes, F.J., Neupane, R., Frank, J., Fernandez, I.S.
PDB entry 6p5j: Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)
Classification: RIBOSOME
Source organism: Israeli acute paralysis virus; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-05-30
Authors: Acosta-Reyes, F.J., Neupane, R., Frank, J., Fernandez, I.S.
PDB entry 6p5k: Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)
Classification: RIBOSOME
Source organism: Israeli acute paralysis virus; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-05-30
Authors: Acosta-Reyes, F.J., Neupane, R., Frank, J., Fernandez, I.S.
PDB entry 6p5l: Crystal Structure of Ubl123 with an EZH2 peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.296 Å
Deposited: 2019-05-30
Authors: Saridakis, V.
PDB entry 6p5m: Discovery of a Novel, Highly Potent, and Selective Thieno[3,2-d]pyrimidinone-Based Cdc7 inhibitor with a Quinuclidine Moiety (TAK-931) as an Orally Active Investigational Anti-Tumor Agent
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2019-05-30
Authors: Hoffman, I.D., Skene, R.J.
PDB entry 6p5n: Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1
Classification: RIBOSOME
Source organism: Homo sapiens; Israeli acute paralysis virus; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-05-30
Authors: Acosta-Reyes, F.J., Neupane, R., Frank, J., Fernandez, I.S.
PDB entry 6p5o: The structure of rat cytosolic PEPCK in complex with 3-(carboxymethylthiol)-picolinic acid
Classification: LYASE/INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2019-05-30
Authors: Mcleod, M.J., Holyoak, T.
PDB entry 6p5p: Discovery of a Novel, Highly Potent, and Selective Thieno[3,2-d]pyrimidinone-Based Cdc7 inhibitor with a Quinuclidine Moiety (TAK-931) as an Orally Active Investigational Anti-Tumor Agent
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2019-05-30
Authors: Hoffman, I.D., Skene, R.J.
PDB entry 6p5q: X-ray structure of Fe(II)-soaked UndA bound to lauric acid
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2019-05-30
Authors: Rajakovich, L.J., Mitchell, A.J., Boal, A.K.
PDB entry 6p5r: Structure of T. brucei MERS1-GDP complex
Classification: RNA BINDING PROTEIN
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2019-05-30
Authors: Schumacher, M.A.
PDB entry 6p5s: HIPK2 kinase domain bound to CX-4945
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.194 Å
Deposited: 2019-05-30
Authors: Agnew, C., Liu, L., Jura, N.
PDB entry 6p5t: Surface-layer (S-layer) RsaA protein from Caulobacter crescentus bound to strontium and iodide
Classification: MEMBRANE PROTEIN
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-05-30
Authors: Chan, A.C., Herrmann, J., Smit, J., Wakatsuki, S., Murphy, M.E.
PDB entry 6p5u: Structure of an enoyl-CoA hydratase/aldolase isolated from a lignin-degrading consortium
Classification: LYASE
Source organism: uncultured organism
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-05-31
Authors: Liberato, M.V., Squina, F.M.
PDB entry 6p5v: Structure of DCN1 bound to N-((4S,5S)-7-ethyl-4-(4-fluorophenyl)-3-methyl-6-oxo-1-phenyl-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl)-3-methylbenzamide
Classification: LIGASE
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.398 Å
Deposited: 2019-05-31
Authors: Guy, R.K., Kim, H.S., Hammill, J.T., Scott, D.C., Schulman, B.A.
PDB entry 6p5w: Structure of DCN1 bound to 3-methyl-N-((4S,5S)-3-methyl-6-oxo-1-phenyl-4-(p-tolyl)-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-b]pyridin-5-yl)benzamide
Classification: LIGASE
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2019-05-31
Authors: Guy, R.K., Kim, H.S., Hammill, J.T., Scott, D.C., Schulman, B.A.
PDB entry 6p5x: Sirohydrochlorin-bound S. typhimurium siroheme synthase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2019-05-31
Authors: Pennington, J.M., Stroupe, M.E.
PDB entry 6p5z: Cobalt-sirohydrochlorin-bound S. typhimurium siroheme synthase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2019-05-31
Authors: Pennington, J.M., Stroupe, M.E.
PDB entry 6p60: Vaccine-elicited NHP FP-targeting neutralizing antibody A12V163-a.02 in complex with HIV fusion peptide (residue 512-519)
Classification: IMMUNE SYSTEM
Source organism: Platyrrhini; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.498 Å
Deposited: 2019-05-31
Authors: Xu, K., Liu, K., Kwong, P.D.
PDB entry 6p61: Structure of a Glycosyltransferase from Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Classification: TRANSFERASE
Source organism: Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-05-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6p62: HIV Env BG505 NFL TD+ in complex with antibody E70 fragment antigen binding
Classification: VIRAL PROTEIN/immune system
Source organism: Human immunodeficiency virus 1; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2019-05-31
Authors: Ozorowski, G., Torres, J.L., Ward, A.B.
PDB entry 6p63: Wild-type NIS synthetase DesD bound to AMP and substrate analog cadaverine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-05-31
Authors: Hoffmann, K.M.
PDB entry 6p64: Alpha-beta TCR Binding to Neoantigen KQWLVWLFL Presented by HLA-A206
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2019-05-31
Authors: Devlin, J.R., Baker, B.M.
PDB entry 6p65: HIV Env 16055 NFL TD 2CC+ in complex with antibody 1C2 fragment antigen binding
Classification: VIRAL PROTEIN/immune system
Source organism: Human immunodeficiency virus 1; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2019-05-31
Authors: Ozorowski, G., Torres, J.L., Ward, A.B.
PDB entry 6p66: The crystal structure of the XPB complex with Bax1 from Archaeoglobus fulgidus at 3.0 Angstrom resolution
Classification: HYDROLASE
Source organism: Archaeoglobus fulgidus DSM 4304
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-06-03
Authors: DuPrez, K.T., Fan, L., Hilario, E.
PDB entry 6p67: Crystal Structure of a Complex of human IL-7Ralpha with an anti-IL-7Ralpha 2B8 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2019-06-03
Authors: Walsh, S.T.R., Kashi, L., Kohnhorst, C.L.
PDB entry 6p68: Crystal structure of FGFR1-Y563C (FGFR4 surrogate) covalently bound to compound 22.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2019-06-03
Authors: Larsen, N.A.
PDB entry 6p69: Crystal structure of FGFR1-Y563C (FGFR4 surrogate) covalently bound to compound 11.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-06-03
Authors: Larsen, N.A.
PDB entry 6p6a: Structure of Mouse Importin alpha - NIT2 NLS peptide complex
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.151 Å
Deposited: 2019-06-03
Authors: Bernardes, N.E., Fukuda, C.A., Silva, T.D., Oliveira, H.C., Fontes, M.R.M.
PDB entry 6p6b: CS-Rosetta Model of PEA-15 Death Effector Domain
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2019-06-03
Authors: Wei, Y., Crespo Flores, S., Cabezas, A., Hassan, S.
PDB entry 6p6c: CS-Rosetta Model of PEA-15 Death Effector Domain in the Complex with ERK2
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2019-06-03
Authors: Wei, Y., Crespo Flores, S., Cabezas, A., Hassan, S.
PDB entry 6p6d: HUMAN IGG1 FC FRAGMENT, C239 INSERTION MUTANT
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2019-06-03
Authors: Gallagher, D.T., Dimasi, N., McCullough, C.
PDB entry 6p6e: Structure of Mouse Importin alpha - PAC3 NLS peptide complex
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2019-06-03
Authors: Bernardes, N.E., Silva, T.D., Fukuda, C.A., Oliveira, H.C., Fontes, M.R.M.
PDB entry 6p6f: BG505 SOSIP-I53-50NP
Classification: IMMUNOGEN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2019-06-03
Authors: Berndsen, Z.T., Ward, A.B.
PDB entry 6p6g: Co-crystal Structure of human SMYD3 with Isoxazole Amides Inhibitors
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2019-06-03
Authors: Elkins, P.A., Wang, L.
PDB entry 6p6i: Structure of YbtPQ importer
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain UTI89 / UPEC)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2019-06-04
Authors: Wang, Z., Hu, W., Zheng, H.
PDB entry 6p6j: Structure of YbtPQ importer with substrate Ybt-Fe bound
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain UTI89 / UPEC)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-06-04
Authors: Wang, Z., Hu, W., Zheng, H.
PDB entry 6p6k: Co-crystal Structure of human SMYD3 with Isoxazole Amides Inhibitors
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-06-04
Authors: Elkins, P.A., Wang, L.
PDB entry 6p6l: HCV NS3/4A protease domain of genotype 1a in complex with glecaprevir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 1a (isolate 1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.728 Å
Deposited: 2019-06-04
Authors: Timm, J., Schiffer, C.A.
PDB entry 6p6m: HCV NS3/4A protease domain of genotype 1a C159 in complex with glecaprevir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 1a (isolate 1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.201 Å
Deposited: 2019-06-04
Authors: Timm, J., Schiffer, C.A.
PDB entry 6p6o: HCV NS3/4A protease domain of genotype 1a D168E in complex with glecaprevir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 1a (isolate 1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2019-06-04
Authors: Timm, J., Schiffer, C.A.
PDB entry 6p6p: Crystal structure of hemagglutinin from influenza virus A/Sichuan/2/1987 (H3N2)
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Sichuan/2/1987(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2019-06-04
Authors: Dai, Y.N., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6p6q: HCV NS3/4A protease domain of genotype 1a3a chimera in complex with grazoprevir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 1a (isolate 1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2019-06-04
Authors: Timm, J., Schiffer, C.A.
PDB entry 6p6r: HCV NS3/4A protease domain of genotype 1a3a chimera in complex with glecaprevir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 1a (isolate 1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.749 Å
Deposited: 2019-06-04
Authors: Timm, J., Schiffer, C.A.
PDB entry 6p6s: HCV NS3/4A protease domain of genotype 3a in complex with glecaprevir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 3a (isolate NZL1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-06-04
Authors: Timm, J., Schiffer, C.A.
PDB entry 6p6t: HCV NS3/4A protease domain of genotype 4a in complex with glecaprevir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 4a (isolate ED43)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-06-04
Authors: Timm, J., Schiffer, C.A.
PDB entry 6p6u: Crystal Structure of Monoclinic Rabbit Muscle Lactate Dehydrogenase with Four Tetramers as the Asymmetric Unit
Classification: OXIDOREDUCTASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2019-06-04
Authors: McPherson, A.
PDB entry 6p6v: HCV NS3/4A protease domain of genotype 5a in complex with glecaprevir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Hepatitis C virus genotype 5a (isolate SA13)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-06-04
Authors: Timm, J., Schiffer, C.A.
PDB entry 6p6w: Cryo-EM structure of voltage-gated sodium channel NavAb N49K/L109A/M116V/G94C/Q150C disulfide crosslinked mutant in the resting state
Classification: membrane protein, metal transport
Source organism: Arcobacter butzleri (strain RM4018); Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2019-06-04
Authors: Wisedchaisri, G., Tonggu, L., McCord, E., Gamal El-Din, T.M., Wang, L., Zheng, N., Catterall, W.A.
PDB entry 6p6x: Crystal structure of voltage-gated sodium channel NavAb G94C/Q150C mutant in the activated state
Classification: membrane protein, metal transport
Source organism: Arcobacter butzleri (strain RM4018)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2019-06-04
Authors: Wisedchaisri, G., Tonggu, L., McCord, E., Gamal El-Din, T.M., Wang, L., Zheng, N., Catterall, W.A.
PDB entry 6p6y: Crystal structure of voltage-gated sodium channel NavAb V100C/Q150C disulfide crosslinked mutant in the activated state
Classification: membrane protein, metal transport
Source organism: Arcobacter butzleri (strain RM4018)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2019-06-04
Authors: Wisedchaisri, G., Tonggu, L., McCord, E., Gamal El-din, T.M., Wang, L., Zheng, N., Catterall, W.A.
PDB entry 6p6z: HCV NS3/4A protease domain of genotype 4a with an extended linker in complex with glecaprevir
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Hepatitis C virus genotype 4a (isolate ED43)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.294 Å
Deposited: 2019-06-04
Authors: Timm, J., Schiffer, C.A.
PDB entry 6p70: X-ray crystal structure of bacterial RNA polymerase and pyrBI promoter complex
Classification: TRANSCRIPTION/DNA
Source organism: Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.052 Å
Deposited: 2019-06-04
Authors: Shin, Y., Murakami, K.S.
PDB entry 6p71: X-ray crystal structure of a bacterial reiterative transcription complex of pyrBI promoter
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2019-06-04
Authors: Shin, Y., Murakami, K.S.
PDB entry 6p72: Crystal Structure of the Cedar henipavirus Attachment G Glycoprotein global domain
Classification: VIRAL PROTEIN
Source organism: Cedar virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.283 Å
Deposited: 2019-06-04
Authors: Xu, K., Nikolov, D.B., Xu, Y.
PDB entry 6p73: Cytochrome-C-nitrite reductase
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-06-04
Authors: Schmidt, M., Pacheco, A.
PDB entry 6p74: OLD nuclease from Thermus Scotoductus
Classification: HYDROLASE
Source organism: Thermus scotoductus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-06-04
Authors: Chappie, J.S., Schiltz, C.J.
PDB entry 6p77: 2.5 Angstrom structure of Caci_6494 from Catenulispora Acidiphila
Classification: UNKNOWN FUNCTION
Source organism: Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2019-06-05
Authors: Vuksanovic, N., Silvaggi, N.R.