LiteFold/PDB huggingface dataset:
PDB entry 5wof: 1.65 ANGSTROM STRUCTURE OF THE DYNEIN LIGHT CHAIN 1 FROM PLASMODIUM FALCIPARUM
Classification: TRANSPORT PROTEIN
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2017-08-02
Authors: Walker, J.R., Lew, J., Amani, M., Alam, Z., Wasney, G., Boulanger, K., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Hui, R., Botchkarev, A., Vedadi, M., Structural Genomics Consortium (SGC)
PDB entry 5wog: Human Hemoglobin immersed in Liquid Oxygen for 1 minute
Classification: OXYGEN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2017-08-02
Authors: Gumpper, R.H., Terrell, J.R., Luo, M.
PDB entry 5woh: Human Hemoglobin Immersed in Liquid Oxygen for 20 seconds
Classification: OXYGEN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2017-08-02
Authors: Gumpper, R.H., Terrell, J.R., Luo, M.
PDB entry 5wol: Crystal structure of dihydrodipicolinate reductase DapB from Coxiella burnetii
Classification: OXIDOREDUCTASE
Source organism: Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-08-02
Authors: Stogios, P.J., Wawrzak, Z., Onopriyenko, O., Grimshaw, S., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5woo: The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein loaded with Myristic acid (C14:0) to 1.78 Angstrom resolution
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2017-08-02
Authors: Cuypers, M.G., Ericson, M., Subramanian, C., White, S.W., Rock, C.O.
PDB entry 5wop: High Resolution Structure of Mutant CA09-PB2cap
Classification: TRANSCRIPTION
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2017-08-02
Authors: Constantinides, A.E., Gumpper, R.H., Severin, C., Luo, M.
PDB entry 5woq: Crystal structure of an XRE family protein transcriptional regulator from Mycobacterium smegmatis
Classification: TRANSCRIPTION
Source organism: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-08-02
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5wor: Corkscrew assembly of SOD1 residues 28-38 with familial mutation G37R
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2017-08-02
Authors: Sangwan, S., Sawaya, M.R., Eisenberg, D.S.
PDB entry 5wos: Structural and functional insights into Canarypox Virus CNP058 regulation of apoptosis
Classification: VIRAL PROTEIN
Source organism: Canarypox virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2017-08-02
Authors: Anasir, M.I., Kvansakul, M.
PDB entry 5wot: NMR solution structure of a-lytic protease using two 4D-spectra
Classification: HYDROLASE
Source organism: Lysobacter enzymogenes
Experimental method: SOLUTION NMR
Deposited: 2017-08-03
Authors: Evangelidis, T., Nerli, S., Sgourakis, N.G., Tripsianes, K.
PDB entry 5wou: Crystal Structure of drosophila melanogaster Scribble PDZ1 domain in complex with Guk-Holder
Classification: CELL ADHESION
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2017-08-03
Authors: Caria, S., Kvansakul, M.
PDB entry 5wov: Solution NMR structure of cyclotide MCoTI-I
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2017-08-03
Authors: Schroeder, C.I., Kwon, S.
PDB entry 5wow: Solution NMR structure of cyclotide MCoTI-I
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2017-08-03
Authors: Schroeder, C.I., Kwon, S.
PDB entry 5wox: NMR solution structure of KanY protein (ms6282) using two 4D-spectra
Classification: UNKNOWN FUNCTION
Source organism: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: SOLUTION NMR
Deposited: 2017-08-03
Authors: Evangelidis, T., Nerli, S., Sgourakis, N.G., Tripsianes, K.
PDB entry 5woy: NMR solution structure of Enzyme I (nEIt) protein using two 4D-spectra
Classification: TRANSFERASE
Source organism: Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Experimental method: SOLUTION NMR
Deposited: 2017-08-03
Authors: Evangelidis, T., Nerli, S., Sgourakis, N.G., Tripsianes, K.
PDB entry 5woz: NMR solution structure of Rtt103 (RTT) protein using two 4D-spectra
Classification: TRANSCRIPTION REGULATOR
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: SOLUTION NMR
Deposited: 2017-08-03
Authors: Evangelidis, T., Nerli, S., Sgourakis, N.G., Tripsianes, K.
PDB entry 5wp0: Crystal structure of NAD synthetase NadE from Vibrio fischeri
Classification: LIGASE
Source organism: Vibrio fischeri (strain ATCC 700601 / ES114)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-08-03
Authors: Stogios, P.J., Evdokimova, E., Grimshaw, S., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5wp1: Complex of ERK2 with 5,7-dihydroxychromone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2017-08-03
Authors: Kurinov, I., Malakhova, M.
PDB entry 5wp2: 1.44 Angstrom crystal structure of CYP121 from Mycobacterium tuberculosis in complex with substrate and CN
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.439 Å
Deposited: 2017-08-03
Authors: Fielding, A., Dornevil, K., Liu, A.
PDB entry 5wp3: Crystal Structure of EED in complex with EB22
Classification: GENE REGULATION
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2017-08-03
Authors: Dong, C., Tempel, W., Zhu, L., Moody, J.D., Baker, D., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 5wp4: Arabidopsis thaliana phosphoethanolamine N-methyltransferase 1 (AtPMT1, XIOPTL) in complex with SAH and phosphocholine
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.341 Å
Deposited: 2017-08-03
Authors: Lee, S.G., Jez, J.M.
PDB entry 5wp5: Arabidopsis thaliana phosphoethanolamine N-methyltransferase 2 (AtPMT2) in complex with SAH
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-08-03
Authors: Lee, S.G., Jez, J.M.
PDB entry 5wp6: Cryo-EM structure of a human TRPM4 channel in complex with calcium and decavanadate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2017-08-03
Authors: Winkler, P.A., Huang, Y., Sun, W., Du, J., Lu, W.
PDB entry 5wp9: Structural Basis of Mitochondrial Receptor Binding and Constriction by Dynamin-Related Protein 1
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.22 Å
Deposited: 2017-08-03
Authors: Kalia, R., Wang, R.Y.R., Yusuf, A., Thomas, P.V., Agard, D.A., Shaw, J.M., Frost, A.
PDB entry 5wpa: Structure of human SFPQ/PSPC1 heterodimer
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2017-08-04
Authors: Lee, M.
PDB entry 5wpb: Crystal structure of fragment 3-(3-(pyridin-2-ylmethoxy)quinoxalin-2-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2017-08-04
Authors: Harding, R.J., Tempel, W., Ferreira de Freitas, R., Franzoni, I., Ravichandran, M., Lautens, M., Santhakumar, V., Schapira, M., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Structural Genomics Consortium (SGC)
PDB entry 5wph: Crystal structure of ArsN, N-acetyltransferase with substrate AST from Pseudomonas putida KT2440
Classification: TRANSFERASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2017-08-04
Authors: Venkadesh, S., Dheeman, D.S., Yoshinaga, M., Kandavelu, P., Rosen, B.P.
PDB entry 5wpi: The virulence-associated protein HsvA from the fire blight pathogen Erwinia amylovora is a polyamine amidinotransferase
Classification: TRANSFERASE
Source organism: Erwinia amylovora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-08-04
Authors: Shanker, S., Lawton, J.
PDB entry 5wpj: Structure of the class II 3-hydroxy-3-methylglutaryl-CoA reductase from Streptococcus pneumoniae bound to NADPH in open conformations
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-08-04
Authors: Miller, B.R., Kung, Y.
PDB entry 5wpk: Structure of the class II 3-hydroxy-3-methylglutaryl-CoA reductase from Streptococcus pneumoniae bound to HMG-CoA and in a partially closed conformation
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-08-04
Authors: Miller, B.R., Kung, Y.
PDB entry 5wpl: KRas G12V, bound to GppNHp and miniprotein 225-11
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2017-08-05
Authors: Lee, S.-J., Shim, S.Y., McGee, J.H., Verdine, G.L.
PDB entry 5wpm: KRas G12V, bound to GppNHp and miniprotein 225-11(A30R)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2017-08-05
Authors: Lee, S.-J., Shim, S.Y., McGee, J.H., Verdine, G.L.
PDB entry 5wpn: Zn-bound Structure of Chaetopterus variopedatus Ferritin
Classification: OXIDOREDUCTASE
Source organism: Chaetopterus variopedatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2017-08-05
Authors: De Meulenaere, E., Bailey, J.B., Tezcan, F.A., Deheyn, D.
PDB entry 5wpp: Crystal structure HpiC1 W73M/K132M
Classification: ISOMERASE
Source organism: Fischerella sp. ATCC 43239
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-08-07
Authors: Newmister, S.A., Li, S., Garcia-Borras, M., Sanders, J.N., Yang, S., Lowell, A.N., Yu, F., Smith, J.L., Williams, R.M., Houk, K.N., Sherman, D.H.
PDB entry 5wpq: Cryo-EM structure of mammalian endolysosomal TRPML1 channel in nanodiscs in closed I conformation at 3.64 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2017-08-07
Authors: Chen, Q., She, J., Guo, J., Bai, X., Jiang, Y.
PDB entry 5wpr: Crystal structure HpiC1 in C2 space group
Classification: ISOMERASE
Source organism: Fischerella sp. ATCC 43239
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2017-08-07
Authors: Newmister, S.A., Li, S., Garcia-Borras, M., Sanders, J.N., Yang, S., Lowell, A.N., Yu, F., Smith, J.L., Williams, R.M., Houk, K.N., Sherman, D.H.
PDB entry 5wps: Crystal structure HpiC1 Y101F
Classification: ISOMERASE
Source organism: Fischerella sp. ATCC 43239
Experimental method: X-RAY DIFFRACTION
Resolution: 1.389 Å
Deposited: 2017-08-07
Authors: Newmister, S.A., Li, S., Garcia-Borras, M., Sanders, J.N., Yang, S., Lowell, A.N., Yu, F., Smith, J.L., Williams, R.M., Houk, K.N., Sherman, D.H.
PDB entry 5wpt: Cryo-EM structure of mammalian endolysosomal TRPML1 channel in nanodiscs in closed II conformation at 3.75 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2017-08-07
Authors: Chen, Q., She, J., Guo, J., Bai, X., Jiang, Y.
PDB entry 5wpu: Crystal structure HpiC1 Y101S
Classification: ISOMERASE
Source organism: Fischerella sp. ATCC 43239
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2017-08-07
Authors: Newmister, S.A., Li, S., Garcia-Borras, M., Sanders, J.N., Yang, S., Lowell, A.N., Yu, F., Smith, J.L., Williams, R.M., Houk, K.N., Sherman, D.H.
PDB entry 5wpv: Cryo-EM structure of mammalian endolysosomal TRPML1 channel in nanodiscs at 3.59 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2017-08-07
Authors: Chen, Q., She, J., Guo, J., Bai, X., Jiang, Y.
PDB entry 5wpw: Crystal structure of coconut allergen cocosin
Classification: ALLERGEN
Source organism: Cocos nucifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.847 Å
Deposited: 2016-11-21
Authors: Jin, T., Zhang, Y.
PDB entry 5wpx: Solution Structure of KstB-PCP loaded with nicotinic acid in kosinostatin biosynthesis
Classification: TRANSPORT PROTEIN
Source organism: Micromonospora sp. TP-A0468
Experimental method: SOLUTION NMR
Deposited: 2016-11-21
Authors: Zhao, B., Lan, W., Tang, G., Cao, C.
PDB entry 5wpy: Solution Structure of KstB-PCP loaded with nicotinic acid in kosinostatin biosynthesis
Classification: TRANSPORT PROTEIN
Source organism: Micromonospora sp. TP-A0468
Experimental method: SOLUTION NMR
Deposited: 2016-11-21
Authors: Zhao, B., Lan, W., Tang, G., Cao, C.
PDB entry 5wpz: Crystal structure of MNDA PYD with MBP tag
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-11-22
Authors: Jin, T.C., Xiao, T.S.
PDB entry 5wq0: Receiver domain of Spo0A from Paenisporosarcina sp. TG-14
Classification: SIGNALING PROTEIN
Source organism: Paenisporosarcina sp. TG-14
Experimental method: X-RAY DIFFRACTION
Resolution: 2.604 Å
Deposited: 2016-11-22
Authors: Lee, J.H., Lee, C.W.
PDB entry 5wq1: Solution Structure of the first stem-loop of Escherichia coli DsrA RNA
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2016-11-22
Authors: Wu, P., Wu, J., Shi, Y.
PDB entry 5wq2: Crystal structure of 3C protease from a mild Human enterovirus 71 in complex with rupintrivir
Classification: HYDROLASE
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2016-11-22
Authors: Li, B., Yuan, Z.
PDB entry 5wq3: Crystal structure of type-II LOG from Corynebacterium glutamicum
Classification: HYDROLASE
Source organism: Corynebacterium glutamicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-11-22
Authors: Seo, H., Kim, K.-J.
PDB entry 5wq4: Crystal structure of OPTN and linear diubiquitin complex
Classification: SIGNALING PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-11-23
Authors: Li, F., Pan, L.
PDB entry 5wq6: Crystal Structure of hMNDA-PYD with MBP tag
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.648 Å
Deposited: 2016-11-23
Authors: Jin, T.C., Xiao, T.S.
PDB entry 5wq7: CryoEM structure of type II secretion system secretin GspD in E.coli K12
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2016-11-23
Authors: Yan, Z., Yin, M., Li, X.
PDB entry 5wq8: CryoEM structure of type II secretion system secretin GspD in Vibrio cholerae
Classification: PROTEIN TRANSPORT
Source organism: Vibrio cholerae O1 biovar El Tor str. N16961
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2016-11-23
Authors: Yan, Z., Yin, M., Li, X.
PDB entry 5wq9: CryoEM structure of type II secretion system secretin GspD G453A mutant in Vibrio cholerae
Classification: PROTEIN TRANSPORT
Source organism: Vibrio cholerae O1 biovar El Tor str. N16961
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.22 Å
Deposited: 2016-11-23
Authors: Yan, Z., Yin, M., Li, X.
PDB entry 5wqa: Crystal structure of PDE4D catalytic domain complexed with Selaginpulvilins K
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-11-24
Authors: Huang, Y., Zhang, T., Zheng, X., Yin, S., Luo, H.B.
PDB entry 5wqc: Crystal structure of human orexin 2 receptor bound to the selective antagonist EMPA determined by the synchrotron light source at SPring-8.
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Pyrococcus abyssi GE5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2016-11-25
Authors: Suno, R., Hirata, K., Yamashita, K., Tsujimoto, H., Sasanuma, M., Horita, S., Yamamoto, M., Rosenbaum, D.M., Iwata, S., Shimamura, T., Kobayashi, T.
PDB entry 5wqd: Crystal structure of TRF2 TRFH in complex with an NBS1 peptide
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-11-26
Authors: Hu, C., Chen, Y., Lei, M.
PDB entry 5wqe: Crystal structure of Alicyclobacillus acidoterrestris C2c1 in complex with single-guide RNA at 3.1 Angstrom resolution
Classification: RNA BINDING PROTEIN
Source organism: Alicyclobacillus acidoterrestris; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.126 Å
Deposited: 2016-11-26
Authors: Liu, L., Wang, Y.L.
PDB entry 5wqf: Structure of fungal meroterpenoid isomerase Trt14
Classification: ISOMERASE
Source organism: Aspergillus terreus NIH 2624
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2016-11-26
Authors: Mori, T., Iwabuchi, T., Matsuda, Y., Abe, I.
PDB entry 5wqg: Structure of fungal meroterpenoid isomerase Trt14 complexed with terretonin D
Classification: ISOMERASE
Source organism: Aspergillus terreus NIH 2624
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-11-26
Authors: Mori, T., Matsuda, Y., Abe, I.
PDB entry 5wqh: Structure of fungal meroterpenoid isomerase Trt14 complexed with substrate analog and endo-terretonin D
Classification: ISOMERASE
Source organism: Aspergillus terreus NIH 2624
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2016-11-26
Authors: Mori, T., Matsuda, Y., Abe, I.
PDB entry 5wqi: Structure of fungal meroterpenoid isomerase Trt14 complexed with hydrolyzed product
Classification: ISOMERASE
Source organism: Aspergillus terreus NIH 2624
Experimental method: X-RAY DIFFRACTION
Resolution: 1.899 Å
Deposited: 2016-11-27
Authors: Mori, T., Matsuda, Y., Abe, I.
PDB entry 5wqj: Crystal structure of 3-Mercaptopyruvate Sulfurtransferase(3MST) in complex with compound1
Classification: TRANSFERASE/INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2016-11-27
Authors: Suwanai, Y., Toma-Fukai, S., Shimizu, T.
PDB entry 5wqk: Crystal structure of 3-Mercaptopyruvate Sulfurtransferase(3MST) in complex with compound1
Classification: TRANSFERASE/INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-11-27
Authors: Suwanai, Y., Toma-Fukai, S., Shimizu, T.
PDB entry 5wql: Structure of a PDZ-protease bound to a substrate-binding adaptor
Classification: PROTEIN BINDING/SIGNALING PROTEIN/HYDROLASE/PEPTIDE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-11-27
Authors: Su, M.Y., Chang, C.I.
PDB entry 5wqm: Crystal structure of a carbonyl reductase from Pseudomonas aeruginosa PAO1 (condition I)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-11-27
Authors: Li, S., Wang, Y., Bartlam, M.
PDB entry 5wqn: Crystal structure of a carbonyl reductase from Pseudomonas aeruginosa PAO1 (condition II)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-11-27
Authors: Li, S., Wang, Y., Bartlam, M.
PDB entry 5wqo: Crystal structure of a carbonyl reductase from Pseudomonas aeruginosa PAO1 in complex with NADP (condition I)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2016-11-27
Authors: Li, S., Wang, Y., Bartlam, M.
PDB entry 5wqp: Crystal structure of a carbonyl reductase from Pseudomonas aeruginosa PAO1 in complex with NADP (condition II)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-11-27
Authors: Li, S., Wang, Y., Bartlam, M.
PDB entry 5wqq: High resolution structure of high-potential iron-sulfur protein in the oxidized state
Classification: METAL BINDING PROTEIN
Source organism: Thermochromatium tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 0.8 Å
Deposited: 2016-11-28
Authors: Ohno, H., Takeda, K., Niwa, S., Tsujinaka, T., Hanazono, Y., Hirano, Y., Miki, K.
PDB entry 5wqr: High resolution structure of high-potential iron-sulfur protein in the reduced state
Classification: METAL BINDING PROTEIN
Source organism: Thermochromatium tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 0.8 Å
Deposited: 2016-11-28
Authors: Ohno, H., Takeda, K., Niwa, S., Tsujinaka, T., Hanazono, Y., Hirano, Y., Miki, K.
PDB entry 5wqs: Crystal structure of Apo Beta-Amylase from Sweet potato
Classification: HYDROLASE
Source organism: Ipomoea batatas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-11-28
Authors: Vajravijayan, S., Sergei, P., Nandhagopal, N., Gunasekaran, K.
PDB entry 5wqt: Structure of a protein involved in pyroptosis
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2016-11-28
Authors: Kuang, S., Li, J.
PDB entry 5wqu: Crystal structure of Sweet Potato Beta-Amylase complexed with Maltotetraose
Classification: HYDROLASE
Source organism: Ipomoea batatas
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2016-11-28
Authors: Vajravijayan, S., Sergei, P., Nandhagopal, N., Gunasekaran, K.
PDB entry 5wqv: Crystal structure of PriB mutant - S55A
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2016-11-28
Authors: Fujiyama, S., Shiroishi, M., Katayama, T., Abe, Y., Ueda, T.
PDB entry 5wqw: X-ray structure of catalytic domain of autolysin from Clostridium perfringens
Classification: HYDROLASE
Source organism: Clostridium perfringens (strain 13 / Type A)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2016-11-29
Authors: Tamai, E., Sekiya, H., Goda, E., Makihata, N., Maki, J., Yoshida, H., Kamitori, S.
PDB entry 5wqx: Covalent bond formation of synthetic ligand with hPPARg-LBD
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2016-11-29
Authors: Kojima, H., Itoh, T., Yamamoto, K.
PDB entry 5wqz: Solution structure of a histone binding domain
Classification: PROTEIN BINDING
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: SOLUTION NMR
Deposited: 2016-11-29
Authors: Mi, J.
PDB entry 5wr0: Huisgen cycloaddition for PPARg-LBD labeling by soaking method
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2016-11-29
Authors: Kojima, H., Itoh, T., Yamamoto, K.
PDB entry 5wr1: Covalent bond formation of bifunctional ligand with hPPARg-LBD
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2016-11-29
Authors: Kojima, H., Itoh, T., Yamamoto, K.
PDB entry 5wr2: Thermolysin, SFX liganded form with oil-based carrier
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-11-29
Authors: Kunishima, N., Naitow, H., Matsuura, Y.
PDB entry 5wr3: Thermolysin, SFX liganded form with water-based carrier
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-11-29
Authors: Kunishima, N., Naitow, H., Matsuura, Y.
PDB entry 5wr4: Thermolysin, SFX unliganded form with oil-based carrier
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-11-29
Authors: Kunishima, N., Naitow, H., Matsuura, Y.
PDB entry 5wr5: Thermolysin, liganded form with cryo condition 1
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-11-29
Authors: Kunishima, N., Naitow, H., Matsuura, Y.
PDB entry 5wr6: Thermolysin, liganded form with cryo condition 2
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-11-29
Authors: Kunishima, N., Naitow, H., Matsuura, Y.
PDB entry 5wr7: Crystal structure of Trk-A complexed with a selective inhibitor CH7057288
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2016-11-30
Authors: Tanaka, H., Blaesse, M., Augustin, M., Goesser, C.
PDB entry 5wr8: Thaumatin structure determined by SACLA at 1.55 Angstrom
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-12-01
Authors: Masuda, T., Suzuki, M., Inoue, S., Sugahara, M.
PDB entry 5wr9: Crystal structure of hen egg-white lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-12-01
Authors: Sugahara, M., Suzuki, M., Masuda, T., Inoue, S., Nango, E.
PDB entry 5wra: Crystal structure of hen egg-white lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-12-01
Authors: Sugahara, M., Suzuki, M., Masuda, T., Inoue, S., Nango, E.
PDB entry 5wrb: Crystal structure of hen egg-white lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.013 Å
Deposited: 2016-12-01
Authors: Sugahara, M., Suzuki, M., Masuda, T., Inoue, S., Nango, E.
PDB entry 5wrc: Crystal structure of proteinase K from Engyodontium album
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-12-01
Authors: Sugahara, M., Nakane, T., Suzuki, M., Masuda, T., Inoue, S., Numata, K.
PDB entry 5wrd: Crystal structure of LC3B in complex with FYCO1 LIR
Classification: PROTEIN BINDING
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-12-01
Authors: Sakurai, S., Ohto, U., Shimizu, T.
PDB entry 5wre: Hepatitis B virus core protein Y132A mutant in complex with heteroaryldihydropyrimidine (HAP_R01)
Classification: VIRAL PROTEIN
Source organism: Hepatitis B virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.946 Å
Deposited: 2016-12-01
Authors: Zhou, Z., Xu, Z.H.
PDB entry 5wrf: Crystal structure of dodecameric type II dehydroquinate dehydratase from Acinetobacter baumannii with unexplained connecting electron density between free cysteine residues of molecular pairs
Classification: LYASE
Source organism: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2016-12-01
Authors: Iqbal, N., Singh, P.K., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 5wrg: SARS-CoV spike glycoprotein
Classification: VIRUS LIKE PARTICLE
Source organism: Human SARS coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2016-12-01
Authors: Gui, M., Song, W., Xiang, Y., Wang, X.
PDB entry 5wrh: FlgG structure based on the CryoEM map of the bacterial flagellar polyrod
Classification: MOTOR PROTEIN
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.4 Å
Deposited: 2016-12-02
Authors: Fujii, T., Namba, K.
PDB entry 5wri: Crystal structure of human tyrosylprotein sulfotransferase-1 complexed with PAP and C4 peptide
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-12-02
Authors: Tanaka, S., Nishiyori, T., Kojo, H., Otsubo, R., Kakuta, Y.
PDB entry 5wrj: Crystal structure of human tyrosylprotein sulfotransferase-1 complexed with PAP and gastrin peptide
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2016-12-02
Authors: Tanaka, S., Nishiyori, T., Kojo, H., Otsubo, R., Kakuta, Y.
PDB entry 5wrk: Mu2 subunit of the clathrin adaptor complex AP2 in complex with IRS-1 Y608 peptide
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2016-12-02
Authors: Yoneyama, Y., Niwa, H., Umehara, T., Yokoyama, S., Hakuno, F., Takahashi, S.
PDB entry 5wrl: Mu2 subunit of the clathrin adaptor complex AP2 in complex with IRS-1 Y628 peptide
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.095 Å
Deposited: 2016-12-02
Authors: Yoneyama, Y., Niwa, H., Umehara, T., Yokoyama, S., Hakuno, F., Takahashi, S.
PDB entry 5wrm: Mu2 subunit of the clathrin adaptor complex AP2 in complex with IRS-1 Y658 peptide
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.597 Å
Deposited: 2016-12-02
Authors: Yoneyama, Y., Niwa, H., Umehara, T., Yokoyama, S., Hakuno, F., Takahashi, S.
PDB entry 5wrn: Human thymidylate synthase complexed with dCMP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2016-12-02
Authors: Chen, D., Nordlund, P.
PDB entry 5wro: Crystal structure of Drosophila enolase
Classification: LYASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.015 Å
Deposited: 2016-12-02
Authors: Zhang, Z., Shi, Z.
PDB entry 5wrp: T-state crystal structure of pyruvate kinase from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2016-12-02
Authors: Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.
PDB entry 5wrq: Structure of human PARP1 catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2016-12-03
Authors: Cao, R., Wang, Y.L., Zhou, J., Huang, N., Xu, B.L.
PDB entry 5wrr: Crystal structure of Fam20A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.506 Å
Deposited: 2016-12-03
Authors: Zhu, Q.
PDB entry 5wrs: Crystal Structure of Fam20A in complex with ATP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2016-12-03
Authors: Zhu, Q.
PDB entry 5wrt: Crystal structure of type I inorganic pyrophosphatase from Toxoplasma gondii.
Classification: HYDROLASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.348 Å
Deposited: 2016-12-03
Authors: Jamwal, A., Yogavel, M., Sharma, A.
PDB entry 5wru: Crystal structure of type I inorganic pyrophosphatase from P falciparum
Classification: HYDROLASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.193 Å
Deposited: 2016-12-03
Authors: Jamwal, A., Yogavel, M., Sharma, A.
PDB entry 5wrv: Complex structure of human SRP72/SRP68
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-12-04
Authors: Gao, Y., Chen, Z.
PDB entry 5wrw: Structure of human apo-SRP72
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2016-12-04
Authors: Gao, Y., Chen, Z.
PDB entry 5wrx: VG13P structure in LPS
Classification: DE NOVO PROTEIN, ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2016-12-04
Authors: Datta, A., Bhunia, A.
PDB entry 5wry: Structure of human PARP1 catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-12-04
Authors: Cao, R., Wang, Y.L., Zhou, J., Huang, N., Xu, B.L.
PDB entry 5wrz: Structure of human PARP1 catalytic domain bound to a phthalazinone inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-12-04
Authors: Cao, R., Wang, Y.L., Zhou, J., Huang, N., Xu, B.L.
PDB entry 5ws0: Structure of human PARP1 catalytic domain bound to a benzoimidazole inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-12-04
Authors: Cao, R., Wang, Y.L., Zhou, J., Huang, N., Xu, B.L.
PDB entry 5ws1: Structure of human PARP1 catalytic domain bound to a benzoimidazole inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-12-04
Authors: Cao, R., Wang, Y.L., Zhou, J., Huang, N., Xu, B.L.
PDB entry 5ws2: Crystal structure of mpy-RNase J (mutant S247A), an archaeal RNase J from Methanolobus psychrophilus R15, complex with RNA
Classification: HYDROLASE
Source organism: Methanolobus psychrophilus R15; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.398 Å
Deposited: 2016-12-05
Authors: Li, D.F., Feng, N.
PDB entry 5ws3: Crystal structures of human orexin 2 receptor bound to the selective antagonist EMPA determined by serial femtosecond crystallography at SACLA
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Pyrococcus abyssi (strain GE5 / Orsay)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-12-05
Authors: Suno, R., Kimura, K., Nakane, T., Yamashita, K., Wang, J., Fujiwara, T., Yamanaka, Y., Im, D., Tsujimoto, H., Sasanuma, M., Horita, S., Hirokawa, T., Nango, E., Tono, K., Kameshima, T., Hatsui, T., Joti, Y., Yabashi, M., Shimamoto, K., Yamamoto, M., Rosenbaum, D.M., Iwata, S., Shimamura, T., Kobayashi, T.
PDB entry 5ws4: Crystal structure of tripartite-type ABC transporter MacB from Acinetobacter baumannii
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2016-12-05
Authors: Murakami, S., Okada, U., Yamashita, E.
PDB entry 5ws5: Native XFEL structure of photosystem II (preflash dark dataset)
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus vulcanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2016-12-05
Authors: Suga, M., Shen, J.R.
PDB entry 5ws6: Native XFEL structure of Photosystem II (preflash two-flash dataset
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus vulcanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2016-12-05
Authors: Suga, M., Shen, J.R.
PDB entry 5ws7: Crystal structure of human MTH1(G2K/C87A/C104S mutant) in complex with 2-oxo-dATP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2016-12-05
Authors: Nakamura, T., Waz, S., Hirata, K., Nakabeppu, Y., Yamagata, Y.
PDB entry 5ws8: Pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2016-12-06
Authors: Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.
PDB entry 5ws9: Pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate, ATP and allosteric activator AMP
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-12-06
Authors: Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.
PDB entry 5wsa: Pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate and allosteric activator Glucose 6-Phosphate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2016-12-06
Authors: Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.
PDB entry 5wsb: Pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate, allosteric activators AMP and Glucose 6-Phosphate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2016-12-06
Authors: Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.
PDB entry 5wsc: Crystal of pyruvate kinase (PYK) from Mycobacterium tuberculosis in complex with Oxalate, soaked with allosteric activators AMP and Glucose 6-Phosphate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-12-06
Authors: Zhong, W., Cai, Q., El Sahili, A., Lescar, J., Dedon, P.C.
PDB entry 5wsd: Crystal structure of a cupin protein (tm1459) in apo form
Classification: METAL BINDING PROTEIN
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2016-12-06
Authors: Fujieda, N., Nakano, T., Taniguchi, Y., Ichihashi, H., Nishikawa, Y., Kurisu, G., Itoh, S.
PDB entry 5wse: Crystal structure of a cupin protein (tm1459) in osmium (Os) substituted form I
Classification: METAL BINDING PROTEIN
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2016-12-06
Authors: Fujieda, N., Nakano, T., Taniguchi, Y., Ichihashi, H., Nishikawa, Y., Kurisu, G., Itoh, S.
PDB entry 5wsf: Crystal structure of a cupin protein (tm1459) in osmium (Os)-substituted form II
Classification: METAL BINDING PROTEIN
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2016-12-06
Authors: Fujieda, N., Nakano, T., Taniguchi, Y., Ichihashi, H., Nishikawa, Y., Kurisu, G., Itoh, S.
PDB entry 5wsg: Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution
Classification: RNA BINDING PROTEIN/RNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Saccharomyces cerevisiae S288c
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2016-12-07
Authors: Yan, C., Wan, R., Bai, R., Huang, G., Shi, Y.
PDB entry 5wsh: Structure of HLA-A2 P130
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-12-07
Authors: Zhang, Y., Wu, Y., Qi, J., Liu, J., Gao, G.F., Meng, S.
PDB entry 5wsk: Structure of Ribulose-1,5-bisphosphate carboxylase/oxygenase from wheat
Classification: LYASE
Source organism: Triticum aestivum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.781 Å
Deposited: 2016-12-07
Authors: Ma, Y., Liu, C.
PDB entry 5wsl: Structural studies of keratinase from Meiothermus taiwanensis WR-220
Classification: HYDROLASE
Source organism: Meiothermus taiwanensis WR-220
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-12-07
Authors: Ho, M.C., Wu, S.H., Chen, M.Y., Tu, I.F.
PDB entry 5wsn: Structure of Japanese encephalitis virus
Classification: VIRUS
Source organism: Japanese encephalitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2016-12-07
Authors: Wang, X., Zhu, L., Li, S., Yuan, S., Qin, C., Fry, E.E., Stuart, I.D., Rao, Z.
PDB entry 5wso: crystal structure of BVDV NS3 helicase
Classification: HYDROLASE
Source organism: Bovine viral diarrhea virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2016-12-08
Authors: Li, P., Shi, J., Wang, S., Li, S., Mao, X.
PDB entry 5wsp: Crystal structure of DNA3 duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.502 Å
Deposited: 2016-12-08
Authors: Gan, J.H., Liu, H.H.
PDB entry 5wsq: Crystal structure of C-Hg-T pair containing DNA duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2016-12-08
Authors: Gan, J.H., Liu, H.H.
PDB entry 5wsr: Crystal structure of T-Hg-T pair containing DNA duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-12-08
Authors: Gan, J.H., Liu, H.H.
PDB entry 5wss: Crystal structure of T-Hg-T pair containing DNA duplex in the presence Ba2+
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-12-08
Authors: Gan, J.H., Liu, H.H.
PDB entry 5wst: Crystal structure of Myo7a SAH
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-12-08
Authors: Li, J., Chen, Y., Deng, Y., Lu, Q., Zhang, M.
PDB entry 5wsu: Crystal structure of Myosin VIIa IQ5-SAH in complex with apo-CaM
Classification: MOTOR PROTEIN/CALCIUM BINDING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-12-08
Authors: Li, J., Chen, Y., Deng, Y., Lu, Q., Zhang, M.
PDB entry 5wsv: Crystal structure of Myosin VIIa IQ5 in complex with Ca2+-CaM
Classification: MOTOR PROTEIN/CALCIUM BINDING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2016-12-08
Authors: Li, J., Chen, Y., Deng, Y., Lu, Q., Zhang, M.
PDB entry 5wsx: The crystal structure of SAV606
Classification: HYDROLASE
Source organism: Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-12-08
Authors: Chisuga, T., Miyanaga, A., Kudo, F., Eguchi, T.
PDB entry 5wsy: The complex structure of SAV606 with N-carboxymethyl-3-aminobutyrate
Classification: HYDROLASE
Source organism: Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-12-08
Authors: Chisuga, T., Miyanaga, A., Kudo, F., Eguchi, T.
PDB entry 5wsz: Crystal structure of a lytic polysaccharide monooxygenase,BtLPMO10A, from Bacillus thuringiensis
Classification: OXIDOREDUCTASE
Source organism: Bacillus thuringiensis subsp. kurstaki
Experimental method: X-RAY DIFFRACTION
Resolution: 2.565 Å
Deposited: 2016-12-08
Authors: Zhao, Y., Zhang, H., Yin, H.
PDB entry 5wt1: Pyrococcus abyssi methyltransferase PaTrm5a bound by SAH and cognate tRNA
Classification: TRANSFERASE/RNA
Source organism: Pyrococcus abyssi (strain GE5 / Orsay); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.598 Å
Deposited: 2016-12-09
Authors: Xie, W., Wang, C., Jia, Q.
PDB entry 5wt2: NifS from Helicobacter pylori
Classification: TRANSFERASE
Source organism: Helicobacter pylori (strain ATCC 700392 / 26695)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2016-12-09
Authors: Fujishiro, T., Takahashi, Y.
PDB entry 5wt3: Pyrococcus abyssi methyltransferase PaTrm5a bound by MTA and cognate tRNA
Classification: TRANSFERASE/RNA
Source organism: Pyrococcus abyssi (strain GE5 / Orsay); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.204 Å
Deposited: 2016-12-09
Authors: Xie, W., Wang, C., Jia, Q.
PDB entry 5wt4: L-Cysteine-PLP intermediate of NifS from Helicobacter pylori
Classification: TRANSFERASE
Source organism: Helicobacter pylori (strain ATCC 700392 / 26695)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2016-12-09
Authors: Fujishiro, T., Nakamura, R., Takahashi, T.
PDB entry 5wt5: L-homocysteine-bound NifS from Helicobacter pylori
Classification: TRANSFERASE
Source organism: Helicobacter pylori (strain ATCC 700392 / 26695)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-12-09
Authors: Fujishiro, T., Takahashi, Y.
PDB entry 5wt6: Cysteine persulfide intermediate of NifS from Helicobacter pylori
Classification: TRANSFERASE
Source organism: Helicobacter pylori (strain ATCC 700392 / 26695)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2016-12-09
Authors: Fujishiro, T., Nakamura, R., Takahashi, Y.
PDB entry 5wt7: FAS1-IV domain of Human Periostin
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2016-12-09
Authors: Yun, H., Lee, C.W.
PDB entry 5wt9: Complex structure of PD-1 and nivolumab-Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.401 Å
Deposited: 2016-12-10
Authors: Tan, S., Zhang, H., Chai, Y., Song, H., Tong, Z., Wang, Q., Qi, J., Wong, G., Zhu, X., Liu, W.J., Gao, S., Wang, Z., Shi, Y., Yang, F., Gao, G.F., Yan, J.
PDB entry 5wta: Crystal Structure of Staphylococcus aureus SdrE apo form
Classification: CELL ADHESION
Source organism: Staphylococcus aureus (strain Mu50 / ATCC 700699)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-12-10
Authors: Wu, M., Zhang, Y., Hang, T., Wang, C., Yang, Y., Zang, J., Zhang, M., Zhang, X.
PDB entry 5wtb: Complex Structure of Staphylococcus aureus SdrE with human complement factor H
Classification: CELL ADHESION
Source organism: Staphylococcus aureus (strain Mu50 / ATCC 700699); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2016-12-10
Authors: Wu, M., Zhang, Y., Hang, T., Wang, C., Yang, Y., Zang, J., Zhang, M., Zhang, X.
PDB entry 5wtc: Structure of human PARP1 catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-12-11
Authors: Cao, R., Wang, Y.L., Zhou, J., Huang, N., Xu, B.L.
PDB entry 5wtd: Structure of human serum transferrin bound ruthenium at N-lobe
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2016-12-11
Authors: Sun, H., Wang, M., Lai, T.P., Zhang, H., Hao, Q.
PDB entry 5wte: Cryo-EM structure for Hepatitis A virus full particle
Classification: VIRUS
Source organism: Hepatitis A virus; Hepatovirus A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2016-12-11
Authors: Wang, X., Zhu, L., Dang, M., Hu, Z., Gao, Q., Yuan, S., Sun, Y., Zhang, B., Ren, J., Walter, T.S., Wang, J., Fry, E.E., Stuart, D.I., Rao, Z.
PDB entry 5wtf: Cryo-EM structure for Hepatitis A virus empty particle
Classification: VIRUS
Source organism: Hepatitis A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2016-12-11
Authors: Wang, X., Zhu, L., Dang, M., Hu, Z., Gao, Q., Yuan, S., Sun, Y., Zhang, B., Ren, J., Walter, T.S., Wang, J., Fry, E.E., Stuart, D.I., Rao, Z.