LiteFold/PDB huggingface dataset:
PDB entry 7xjp: Cryo-EM structure of EDS1 and SAG101 with ATP-APDR
Classification: PLANT PROTEIN
Source organism: Arabidopsis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2022-04-18
Authors: Huang, S.J., Jia, A.L., Han, Z.F., Chai, J.J.
PDB entry 7xjr: MLXase AlXyn26A
Classification: HYDROLASE
Source organism: Algibacter sp. L4_22
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-04-18
Authors: Zhang, Y.Z., Chen, X.L., Zhao, F., Yu, C.M.
PDB entry 7xjt: Catabolic ornithine carbamoyltransferases (OTCs) from Psychrobacter sp. PAMC 21119
Classification: TRANSFERASE
Source organism: Psychrobacter sp. PAMC 21119
Experimental method: X-RAY DIFFRACTION
Resolution: 2.598 Å
Deposited: 2022-04-18
Authors: Do, H., Lee, J.H.
PDB entry 7xjv: Crystal Structure of Alpha-1,3-mannosyltransferase MNT2 from Saccharomyces cerevisiae, Mn/GDP-mannose form
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae W303
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-04-18
Authors: Hira, D., Kadooka, C., Oka, T.
PDB entry 7xjw: Crystal structure of canine coronavirus main protease in complex with GC376
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Canine coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-04-18
Authors: Wang, Y.C., Yang, C.S., Hou, M.H., Tsai, C.L., Chiu, Y.F., Chen, Y.
PDB entry 7xjx: The cryo-EM structure of Fe3+ induced alpha-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-04-18
Authors: Zhao, Q.Y., Tao, Y.Q., Zhao, K., Tao, Y.Q., Li, D.
PDB entry 7xjy: Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase (apo form)
Classification: LIGASE/RNA
Source organism: Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-04-19
Authors: Yu, Z., Wu, Z., Li, Y., Lu, G., Lin, J.
PDB entry 7xjz: Cryo-EM strucrture of Oryza sativa plastid glycyl-tRNA synthetase in complex with tRNA (tRNA binding state)
Classification: LIGASE/RNA
Source organism: Oryza sativa; Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-04-19
Authors: Yu, Z., Wu, Z., Li, Y., Lu, G., Lin, J.
PDB entry 7xk0: Cryo-EM strucrture of Oryza sativa plastid glycyl-tRNA synthetase in complex with tRNA (tRNA locked state)
Classification: LIGASE/RNA
Source organism: Oryza sativa; Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2022-04-19
Authors: Yu, Z., Wu, Z., Li, Y., Lu, G., Lin, J.
PDB entry 7xk1: Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase in complex with two tRNAs (both in tRNA binding states)
Classification: LIGASE/RNA
Source organism: Oryza sativa; Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2022-04-19
Authors: Yu, Z., Wu, Z., Li, Y., Lu, G., Lin, J.
PDB entry 7xk2: Cryo-EM Structure of Human Niacin Receptor HCA2-Gi protein complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-19
Authors: Yang, Y., Kang, H.J., Gao, R.G., Wang, J.J., Han, G.W., DiBerto, J.F., Wu, L.J., Tong, J.H., Qu, L., Wu, Y.R., Pileski, R., Li, X.M., Zhang, X.C., Zhao, S.W., Kenakin, T., Wang, Q., Stevens, R.C., Peng, W., Roth, B.L., Rao, Z.H., Liu, Z.J.
PDB entry 7xk3: Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, state 1
Classification: TRANSLOCASE
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-19
Authors: Kishikawa, J., Ishikawa, M., Masuya, T., Murai, M., Barquera, B., Miyoshi, H.
PDB entry 7xk4: Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, state 2
Classification: TRANSLOCASE
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-19
Authors: Kishikawa, J., Ishikawa, M., Masuya, T., Murai, M., Barquera, B., Miyoshi, H.
PDB entry 7xk5: Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, state 3
Classification: TRANSLOCASE
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-19
Authors: Kishikawa, J., Ishikawa, M., Masuya, T., Murai, M., Barquera, B., Miyoshi, H.
PDB entry 7xk6: Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, with aurachin D-42
Classification: TRANSLOCASE
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-04-19
Authors: Kishikawa, J., Ishikawa, M., Masuya, T., Murai, M., Barquera, B., Miyoshi, H.
PDB entry 7xk7: Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae, with korormicin
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-04-19
Authors: Kishikawa, J., Ishikawa, M., Masuya, T., Murai, M., Barquera, B., Miyoshi, H.
PDB entry 7xk8: Cryo-EM structure of the Neuromedin U receptor 2 (NMUR2) in complex with G Protein and its endogeneous Peptide-Agonist NMU25
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-04-19
Authors: Zhao, W., Wenru, Z., Mu, W., Minmin, L., Shutian, C., Tingting, T., Gisela, S., Holger, W., Albert, B., Cuiying, Y., Xiaojing, C., Han, S., Wu, B., Zhao, Q.
PDB entry 7xk9: Structure of human beta2 adrenergic receptor bound to constrained isoproterenol
Classification: MEMBRANE PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2022-04-19
Authors: Xu, X., Shonberg, J., Kaindl, J., Clark, M., Stobel, A., Maul, L., Mayer, D., Hubner, H., Venkatakrishnan, A., Dror, R., Kobilka, B.K., Sunahara, R., Liu, X., Gmeiner, P.
PDB entry 7xka: Structure of human beta2 adrenergic receptor bound to constrained epinephrine
Classification: MEMBRANE PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-04-19
Authors: Xu, X., Shonberg, J., Kaindl, J., Clark, M., Stobel, A., Maul, L., Mayer, D., Hubner, H., Venkatakrishnan, A., Dror, R., Kobilka, B.K., Sunahara, R., Liu, X., Gmeiner, P.
PDB entry 7xkc: Crystal structure of Daucus Carrot hypoglycemic peptide (DCHP)
Classification: PLANT PROTEIN
Source organism: Daucus carota subsp. sativus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2022-04-19
Authors: Guo, T., Ren, J.Q., Wang, L., Shi, Y.W., Feng, W.
PDB entry 7xkd: Cryo-EM structure of DHEA-ADGRG2-BT-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Camelus bactrianus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-04-19
Authors: Guo, S.C., Xiao, P., Lin, H., Sun, J.P., Yu, X.
PDB entry 7xke: Cryo-EM structure of DHEA-ADGRG2-FL-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Camelus bactrianus; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-04-19
Authors: Guo, S.C., Xiao, P., Lin, H., Sun, J.P., Yu, X.
PDB entry 7xkf: Cryo-EM structure of DHEA-ADGRG2-BT-Gs complex at lower state
Classification: MEMBRANE PROTEIN
Source organism: Camelus bactrianus; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-04-19
Authors: Guo, S.C., Xiao, P., Lin, H., Sun, J.P., Yu, X.
PDB entry 7xkg: Crystal structure of an intramolecular mesacyl-CoA transferase from the 3-hydroxypropionic acid cycle of Roseiflexus castenholzii
Classification: TRANSFERASE
Source organism: Roseiflexus castenholzii DSM 13941
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-04-19
Authors: Min, Z.Z., Fan, C.P., Wu, W.P., Xin, Y.Y., Liu, M.H., Zhang, X., Wang, Z.G., Xu, X.L.
PDB entry 7xkh: Nucleotide-depleted F1 domain of FoF1-ATPase from Bacillus PS3, state1
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-19
Authors: Nakano, A., Kishikawa, J., Nakanishi, A., Mitsuoka, K., Yokoyama, K.
PDB entry 7xki: Human Cx36/GJD2 (N-terminal deletion BRIL-fused mutant) gap junction channel in soybean lipids (D6 symmetry)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-04-19
Authors: Cho, H.J., Lee, S.N., Jeong, H., Ryu, B., Lee, H.J., Woo, J.S., Lee, H.H.
PDB entry 7xkj: Kras-G12D-GDP-MRTX1133 by FIB-MicroED
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 3 Å
Deposited: 2022-04-19
Authors: Li, X.M.
PDB entry 7xkk: Human Cx36/GJD2 gap junction channel in detergents
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-04-19
Authors: Lee, S.N., Cho, H.J., Jeong, H., Ryu, B., Lee, H.J., Lee, H.H., Woo, J.S.
PDB entry 7xkm: Crystal structure of DNA-Ag(I) rod comprising a one-dimensional array of 11 silver ions
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2022-04-20
Authors: Kondo, J., Ono, A., Atsugi, T.
PDB entry 7xko: F1 domain of epsilon C-terminal domain deleted FoF1 from Bacillus PS3,state1,nucleotide depeleted
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-04-20
Authors: Nakano, A., Kishikawa, J., Nakanishi, A., Mitsuoka, K., Yokoyama, K.
PDB entry 7xkp: F1 domain of epsilon C-terminal domain deleted FoF1 from Bacillus PS3,state1,unisite condition
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-04-20
Authors: Nakano, A., Kishikawa, J., Nakanishi, A., Mitsuoka, K., Yokoyama, K.
PDB entry 7xkq: F1 domain of FoF1-ATPase with the down form of epsilon subunit from Bacillus PS3
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-04-20
Authors: Nakano, A., Kishikawa, J., Nakanishi, A., Mitsuoka, K., Yokoyama, K.
PDB entry 7xkr: F1 domain of FoF1-ATPase with the up form of epsilon subunit from Bacillus PS3
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-04-20
Authors: Nakano, A., Kishikawa, J., Nakanishi, A., Mitsuoka, K., Yokoyama, K.
PDB entry 7xks: Crystal structure of an alkaline pectate lyase from Bacillus clausii
Classification: LYASE
Source organism: Alkalihalobacillus clausii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-04-20
Authors: Zhou, C., Zheng, Y.Y., Liu, W.D., Ma, Y.
PDB entry 7xkt: Human Cx36/GJD2 (BRIL-fused mutant) gap junction channel in detergents at 2.2 Angstroms resolution
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2022-04-20
Authors: Cho, H.J., Lee, S.N., Jeong, H., Ryu, B., Lee, H.J., Woo, J.S., Lee, H.H.
PDB entry 7xkw: The 3D strcuture of (-)-cyperene synthase with substrate analogue FSPP
Classification: PLANT PROTEIN
Source organism: Artabotrys hexapetalus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-20
Authors: Yu, S.S., Zhu, P., Liu, Y.B., Ma, S.G., Ye, D., Shao, Y.Z., Li, W.R., Cui, Z.J.
PDB entry 7xkx: Crystal structure of Tpn2
Classification: BIOSYNTHETIC PROTEIN
Source organism: Kitasatospora sp. CB02891
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2022-04-20
Authors: Chang, C.Y., Stowell, E.A., Lin, Y.L., Ehrenberger, M.A., Rudolf, J.D.
PDB entry 7xky: Crystal structure of Methanocaldococcus jannaschii two-subunit Fumarate hydratase apo-protein complex
Classification: LYASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2022-04-20
Authors: Bellur, A., Jayaraman, V., Balaram, H.
PDB entry 7xkz: Solution structure of subunit epsilon of the Mycobacterium abscessus F-ATP synthase
Classification: ELECTRON TRANSPORT
Source organism: Mycobacteroides abscessus
Experimental method: SOLUTION NMR
Deposited: 2022-04-20
Authors: Shin, J., Grueber, G., Harikishore, A., Wong, C.F., Prya, R., Dick, T.
PDB entry 7xl0: Crystal structure of Vobarilizumab at 1.70 Angstrom
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-04-20
Authors: Caaveiro, J.M.M., Mori, C., Kinoshita, S., Nakakido, M., Tsumoto, K.
PDB entry 7xl1: Crystal structure of chimeric 7D12-Vob nanobody at 1.65 Angstrom
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-04-20
Authors: Caaveiro, J.M.M., Kinoshita, S., Mori, C., Nakakido, M., Tsumoto, K.
PDB entry 7xl3: Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (open lobe)
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2022-04-21
Authors: He, D.W., You, L.L., Zhang, Y.
PDB entry 7xl4: Cryo-EM structure of Pseudomonas aeruginosa RNAP sigmaS holoenzyme complexes with transcription factor SutA (closed lobe)
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2022-04-21
Authors: He, D.W., You, L.L., Zhang, Y.
PDB entry 7xl5: Crystal structure of the H42T/A85G/I86A mutant of a nadp-dependent alcohol dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Thermoanaerobacter brockii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.604 Å
Deposited: 2022-04-21
Authors: Jiang, Y.Y., Qu, G., Li, X., Sun, Z.T., Han, X., Liu, W.D.
PDB entry 7xl6: Cryo-EM structure of human pannexin 3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-04-21
Authors: Hang, Z., Huawei, Z., Daping, W.
PDB entry 7xl7: Function And Structure Research of Salmonella typhimurium Unknown Functional Protein MicN
Classification: UNKNOWN FUNCTION
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-04-21
Authors: Wang, Q., Li, B.Q.
PDB entry 7xl8: Human Cx36/GJD2 (N-terminal deletion mutant) gap junction channel in soybean lipids (D6 symmetry)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-04-21
Authors: Lee, S.N., Cho, H.J., Jeong, H., Ryu, B., Lee, H.J., Lee, H.H., Woo, J.S.
PDB entry 7xl9: The structure of HucR with urate
Classification: TRANSCRIPTION
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2022-04-21
Authors: Park, S.Y.
PDB entry 7xlb: Cryo-EM structure of human pannexin 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2022-04-21
Authors: Hang, Z., Huawei, Z., Daping, W.
PDB entry 7xlc: conformation II of apo-IGF1R states
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2022-04-21
Authors: Xi, Z., Cang, W.
PDB entry 7xld: Crystal structure of IsdH linker-NEAT3 bound to a nanobody (VHH)
Classification: METAL TRANSPORT
Source organism: Lama glama; Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-04-21
Authors: Caaveiro, J.M.M., Valenciano-Bellido, S., Tsumoto, K.
PDB entry 7xlf: Crystal structure of CH3-THF complex of methylenetetrahydrofolate reductase from Sphingobium sp. SYK-6
Classification: OXIDOREDUCTASE
Source organism: Sphingobium sp. SYK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-04-21
Authors: Yu, H.Y., Senda, M., Senda, T.
PDB entry 7xli: Crystal structure of IsdB linker-NEAT2 bound to a nanobody (VHH)
Classification: METAL TRANSPORT
Source organism: Lama glama; Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-04-21
Authors: Caaveiro, J.M.M., Valenciano-Bellido, S., Tsumoto, K.
PDB entry 7xlj: The crystal structure of ORE1(ANAC092) NAC domain
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-04-21
Authors: Chun, I.S., Kim, M.S.
PDB entry 7xll: Alanine racemase from Lactobacillus sakei Uonuma-1.
Classification: ISOMERASE
Source organism: Latilactobacillus sakei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2022-04-22
Authors: Shimizu-Ibuka, A., Kato, Y.
PDB entry 7xlm: Human diastrophic dysplasia sulfate transporter SLC26A2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2022-04-22
Authors: Chi, X.M., Zhou, Q.
PDB entry 7xlo: Crystal Structure of the Catalytic Domain of Inosine Monophosphate Dehydrogenase (IMPDH) from Methanocaldococcus jannaschii
Classification: OXIDOREDUCTASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-04-22
Authors: Bellur, A., Sharma, P., Balaram, H.
PDB entry 7xlp: MEK1 bound to DS03090629
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-04-22
Authors: Kishikawa, S., Takano, K., Ubukata, O., Hanzawa, H.
PDB entry 7xlq: Structure of human R-type voltage-gated CaV2.3-alpha2/delta1-beta1 channel complex in the ligand-free (apo) state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-22
Authors: Gao, Y., Qiu, Y., Wei, Y., Dong, Y., Zhang, X.C., Zhao, Y.
PDB entry 7xlt: Cryo-EM Structure of R-loop monoclonal antibody S9.6 in recognizing RNA:DNA hybrids
Classification: DNA-RNA HYBRID
Source organism: Arabidopsis; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-04-22
Authors: Li, Q., Lin, C., Luo, Z., Li, H., Li, X., Sun, Q.
PDB entry 7xlv: Crystal structure of a NIR-emitting DNA-stabilized Ag16 nanocluster (G7I mutant)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-04-23
Authors: Kondo, J., Cerretani, C., Vosch, T.
PDB entry 7xlw: Crystal structure of a NIR-emitting DNA-stabilized Ag16 nanocluster (G7I/G9I mutant)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-04-23
Authors: Kondo, J., Cerretani, C., Vosch, T.
PDB entry 7xly: Crystal structure of FadA2 (Rv0243) from the fatty acid metabolic pathway of Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-04-23
Authors: Singh, R., Kundu, P., Singh, B.K., Bhattacharyya, S., Das, A.K.
PDB entry 7xlz: Structure of siderophore-interacting protein from Vibrio anguillarum
Classification: OXIDOREDUCTASE
Source organism: Vibrio anguillarum (strain ATCC 68554 / 775)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2022-04-23
Authors: Ma, Q., Liu, C., Han, Y.
PDB entry 7xm0: Crystal structure of Sau3AI-C and DNA substrate complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-04-23
Authors: Liu, Y., Yu, F., He, J.
PDB entry 7xm1: Cryo-EM structure of mTIP60-Ba (metal-ion induced TIP60 (K67E) complex with barium ions
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2022-04-24
Authors: Ohara, N., Kawakami, N., Arai, R., Adachi, N., Moriya, T., Kawasaki, M., Miyamoto, K.
PDB entry 7xm2: Crystal structure of Keap1 Kelch domain (residues 322-609) in complex with NXPZ-2
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-04-24
Authors: Xu, K.
PDB entry 7xm3: Crystal structure of Keap1 Kelch domain (residues 322-609) in complex with 6k
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-04-24
Authors: Xu, K.
PDB entry 7xm4: Crystal structure of Keap1 Kelch domain (residues 322-609) in complex with 6e
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-04-24
Authors: Xu, K.
PDB entry 7xm5: Keap1 Kelch domain (residues 322-609) in complex with 6i
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-04-24
Authors: Xu, K.
PDB entry 7xm7: Crystal Structure of the CBP in complex with the Y08188
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2022-04-25
Authors: Xiang, Q., Zhang, Y., Wang, C., Song, M., Xu, Y.
PDB entry 7xm8: Glucagon amyloid fibril
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-04-25
Authors: Jeong, H., Lin, Y., Lee, Y.-H.
PDB entry 7xm9: Cryo-EM structure of human NaV1.7/beta1/beta2-XEN907
Classification: TRANSPORT PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2022-04-25
Authors: zhang, J.T., Jiang, D.H.
PDB entry 7xma: Crystal structure of Bovine heart cytochrome c oxidase, apo structure with DMSO
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-04-25
Authors: Nishida, Y., Shinzawa-Itoh, K., Mizuno, N., Kumasaka, T., Yoshikawa, S., Tsukihara, T., Takashima, S., Shintani, Y.
PDB entry 7xmb: Crystal structure of Bovine heart cytochrome c oxidase, the structure complexed with an allosteric inhibitor T113
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-04-25
Authors: Nishida, Y., Shinzawa-Itoh, K., Mizuno, N., Kumasaka, T., Yoshikawa, S., Tsukihara, T., Shintani, Y., Takashima, S.
PDB entry 7xmc: Cryo-EM structure of Cytochrome bo3 from Escherichia coli, apo structure with DMSO
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2022-04-25
Authors: Nishida, Y., Shigematsu, H., Iwamoto, T., Takashima, S., Shintani, Y.
PDB entry 7xmd: Cryo-EM structure of Cytochrome bo3 from Escherichia coli, the structure complexed with an allosteric inhibitor N4
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2022-04-25
Authors: Nishida, Y., Shigematsu, H., Iwamoto, T., Takashima, S., Shintani, Y.
PDB entry 7xme: Structure of Influenza A virus polymerase basic protein 2 (PB2) with an azazindole derivative
Classification: RNA BINDING PROTEIN
Source organism: Influenza A virus (A/Victoria/3/1975(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.521 Å
Deposited: 2022-04-25
Authors: Zhang, Z.
PDB entry 7xmf: Cryo-EM structure of human NaV1.7/beta1/beta2-Nav1.7-IN2
Classification: TRANSPORT PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2022-04-25
Authors: Zhang, J.T., Jiang, D.H.
PDB entry 7xmg: Cryo-EM structure of human NaV1.7/beta1/beta2-TCN-1752
Classification: PROTEIN TRANSPORT
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2022-04-25
Authors: Jiang, D.H., Zhang, J.T.
PDB entry 7xmh: Crystal structure of a rice class IIIb chitinase, Oschib2
Classification: HYDROLASE
Source organism: Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2022-04-25
Authors: Jun, T., Tomoya, T., Tomoyuki, N., Takayuki, O.
PDB entry 7xmj: Crystal structure of carbohydrate esterase family 7 acetyl xylan esterase
Classification: STRUCTURAL PROTEIN
Source organism: Lactococcus lactis subsp. lactis (strain KF147)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41067 Å
Deposited: 2022-04-26
Authors: Jiang, Z.Q., Ma, J.W.
PDB entry 7xmk: Crystal structure of human RIPK1 kinase domain in complex with compound SKLB923
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.376 Å
Deposited: 2022-04-26
Authors: Zhang, L., Wang, Y., Li, Y., Yang, S.
PDB entry 7xml: Cryo-EM structure of PEIP-Bs_enolase complex
Classification: LYASE/LYASE INHIBITOR
Source organism: Bacillus phage SP01; Bacillus subtilis (strain 168)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-04-26
Authors: Li, S., Zhang, K.
PDB entry 7xmn: Structure of SARS-CoV-2 ORF8
Classification: VIRAL PROTEIN
Source organism: Escherichia coli; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-04-26
Authors: Chen, X., Xu, W.
PDB entry 7xmp: High resolution structure of lectin-like Ox-LDL receptor 1 in space group P 32 2 1
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2022-04-26
Authors: Tomar, A., Varughese, K.I., Arockiasamy, A.
PDB entry 7xmr: CryoEM structure of the somatostatin receptor 2 (SSTR2) in complex with Gi1 and its endogeneous peptide ligand SST-14
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-26
Authors: Wenli, Z., Shuo, H., Na, Q., Wenbo, Z., Mengjie, L., Dehua, Y., Ming-Wei, W., Wu, B., Zhao, Q.
PDB entry 7xms: CryoEM structure of somatostatin receptor 4 (SSTR4) in complex with Gi1 and its endogeneous ligand SST-14
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-04-26
Authors: Wenli, Z., Shuo, H., Na, Q., Wenbo, Z., Mengjie, L., Dehua, Y., Ming-Wei, W., Wu, B., Zhao, Q.
PDB entry 7xmt: CryoEM structure of somatostatin receptor 4 (SSTR4) with Gi1 and J-2156
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-04-26
Authors: Wenli, Z., Shuo, H., Na, Q., Wenbo, Z., Mengjie, L., Dehua, Y., Ming-Wei, W., Wu, B., Zhao, Q.
PDB entry 7xmu: E.coli phosphoribosylpyrophosphate (PRPP) synthetase type A filament bound with ADP, Pi and R5P
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli str. K-12 substr. MG1655
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-04-26
Authors: Hu, H.H., Lu, G.M., Chang, C.C., Liu, J.L.
PDB entry 7xmv: E.coli phosphoribosylpyrophosphate (PRPP) synthetase type A(AMP/ADP) filament bound with ADP, AMP and R5P
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli str. K-12 substr. MG1655
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-04-27
Authors: Hu, H.H., Lu, G.M., Chang, C.C., Liu, J.L.
PDB entry 7xmw: Crystal structure of anti-CRISPR protein AcrVIA2
Classification: ANTIVIRAL PROTEIN
Source organism: Leptotrichia wadei (strain F0279)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2022-04-27
Authors: Yan, X., Li, X., Song, G.
PDB entry 7xmx: Cryo-EM structure of SARS-CoV-2 spike glycoprotein in complex with three F61 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2022-04-27
Authors: Wang, X., Li, X.
PDB entry 7xmz: Cryo-EM structure of SARS-CoV-2 spike glycoprotein in complex with three D2 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-04-27
Authors: Wang, X., Li, X.
PDB entry 7xn1: Crystal structure of human acetylcholinesterase in complex with tacrine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-04-27
Authors: Dileep, K.V., Ihara, K., Mishima-Tsumagari, C., Kukimoto-Niino, M., Yonemochi, M., Hanada, K., Shirouzu, M., Zhang, K.Y.J.
PDB entry 7xn2: Crystal structure of CvkR, a novel MerR-type transcriptional regulator
Classification: TRANSCRIPTION
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-04-27
Authors: Liang, Y.J., Zhu, T., Ma, H.L., Lu, X.F., Hess, W.R.
PDB entry 7xn3: E.coli phosphoribosylpyrophosphate (PRPP) synthetase type B filament bound with Pi
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli str. K-12 substr. MG1655
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-04-27
Authors: Hu, H.H., Lu, G.M., Chang, C.C., Liu, J.L.
PDB entry 7xn4: Cryo-EM structure of CopC-CaM-caspase-3 with NAD+
Classification: TOXIN
Source organism: Chromobacterium violaceum; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2022-04-28
Authors: Zhang, K., Peng, T., Tao, X.Y., Tian, M., Li, Y.X., Wang, Z., Ma, S.F., Hu, S.F., Pan, X., Xue, J., Luo, J.W., Wu, Q.L., Fu, Y., Li, S.
PDB entry 7xn5: Cryo-EM structure of CopC-CaM-caspase-3 with ADPR
Classification: TOXIN
Source organism: Chromobacterium violaceum; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2022-04-28
Authors: Zhang, K., Peng, T., Tao, X.Y., Tian, M., Li, Y.X., Wang, Z., Ma, S.F., Hu, S.F., Pan, X., Xue, J., Luo, J.W., Wu, Q.L., Fu, Y., Li, S.
PDB entry 7xn6: Cryo-EM structure of CopC-CaM-caspase-3 with ADPR-deacylization
Classification: TOXIN
Source organism: Chromobacterium violaceum; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2022-04-28
Authors: Zhang, K., Peng, T., Tao, X.Y., Tian, M., Li, Y.X., Wang, Z., Ma, S.F., Hu, S.F., Pan, X., Xue, J., Luo, J.W., Wu, Q.L., Fu, Y., Li, S.
PDB entry 7xn7: RNA polymerase II elongation complex containing Spt4/5, Elf1, Spt6, Spn1 and Paf1C
Classification: TRANSCRIPTION
Source organism: Komagataella phaffii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-28
Authors: Ehara, H., Kujirai, T., Shirouzu, M., Kurumizaka, H., Sekine, S.
PDB entry 7xn9: Crystal structure of SSTR2 and L-054,522 complex
Classification: SIGNARING PROTEIN/INHIBITOR
Source organism: Homo sapiens; Niallia circulans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-04-28
Authors: Zhao, W., Han, S., Qiu, N., Feng, W., Lu, M., Yang, D., Wang, M.-W., Wu, B., Zhao, Q.
PDB entry 7xna: Crystal structure of somatostatin receptor 2 (SSTR2) with peptide antagonist CYN 154806
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens; Niallia circulans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-04-28
Authors: Zhao, W., Han, S., Qiu, N., Feng, W., Lu, M., Yang, D., Wang, M.-W., Wu, B., Zhao, Q.
PDB entry 7xnc: MEK1 bound to DS94070624
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-04-28
Authors: Kishikawa, S., Takano, K., Ubukata, O., Hanzawa, H.
PDB entry 7xnd: Crystal structure of Phosphomevalonate kinase from Silkworm
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-04-28
Authors: Guo, P.C., Zhang, H.
PDB entry 7xne: Crystal structure of CBP bromodomain liganded with Y08284
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2022-04-28
Authors: Xiang, Q., Wang, C., Wu, T., Zhang, C., Hu, Q., Luo, G., Hu, J., Zhuang, X., Zou, L., Shen, H., Wu, X., Zhang, Y., Kong, X., Xu, Y.
PDB entry 7xnf: Structure of SARS-CoV-2 antibody P2C-1F11 with GX/P2V/2017 RBD
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Pangolin coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2022-04-28
Authors: Jia, Y.F., Chai, Y., Wang, Q.H., Gao, G.F.
PDB entry 7xng: Crystal structure of CBP bromodomain liganded with Y08092(31g)
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-04-28
Authors: Xiang, Q., Zhang, Y., Wang, C., Song, M., Xu, Y.
PDB entry 7xnh: Human Cx36/GJD2 gap junction channel with pore-lining N-terminal helices in soybean lipids
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-28
Authors: Lee, S.N., Cho, H.J., Jeong, H., Ryu, B., Lee, H.J., Lee, H.H., Woo, J.S.
PDB entry 7xni: human KCNQ1-CaM in apo state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-04-28
Authors: Ma, D., Guo, J.
PDB entry 7xnj: Stress Response Facilitator A SrfA
Classification: GENE REGULATION
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-04-28
Authors: Lou, X., Zhang, Q., Bartlam, M.
PDB entry 7xnk: human KCNQ1-CaM in complex with ML277
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-04-29
Authors: Ma, D., Guo, J.
PDB entry 7xnl: human KCNQ1-CaM-ML277-PIP2 complex in state A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-04-29
Authors: Ma, D., Guo, J.
PDB entry 7xnm: Structure of porcine dipeptidyl peptidase 4 inhibitory peptide complex
Classification: HYDROLASE
Source organism: Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.58 Å
Deposited: 2022-04-29
Authors: Li, W.Y., Cao, M.J.
PDB entry 7xnn: human KCNQ1-CaM-ML277-PIP2 complex in state B
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-04-29
Authors: Ma, D., Guo, J.
PDB entry 7xno: Cryo-EM structure of the bacteriocin-receptor-immunity ternary complex from Lactobacillus sakei
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Latilactobacillus sakei L45
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2022-04-29
Authors: Wang, J.W.
PDB entry 7xnp: Structure of nucleosome-AAG complex (A-55I, post-catalytic state)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-04-29
Authors: Zheng, L., Tsai, B., Gao, N.
PDB entry 7xnq: SARS-CoV-2 Omicron BA.4 variant spike
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2022-04-29
Authors: Wang, X., Wang, L.
PDB entry 7xnr: SARS-CoV-2 Omicron BA.2.13 variant spike
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2022-04-29
Authors: Wang, X., Wang, L.
PDB entry 7xns: SARS-CoV-2 Omicron BA.2.12.1 variant spike
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2022-04-29
Authors: Wang, X., Wang, L.
PDB entry 7xnt: Crystal structure of PfHPPD-Y13161 complex
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.822 Å
Deposited: 2022-04-29
Authors: Lin, H.-Y., Yang, G.-F.
PDB entry 7xnv: Structurally hetero-junctional human Cx36/GJD2 gap junction channel in soybean lipids (C6 symmetry)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-04-29
Authors: Lee, S.N., Cho, H.J., Jeong, H., Ryu, B., Lee, H.J., Lee, H.H., Woo, J.S.
PDB entry 7xnx: High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-04-30
Authors: Cheng, J., Beckmann, R.
PDB entry 7xny: High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-04-30
Authors: Cheng, J., Beckmann, R.
PDB entry 7xnz: Native cystathionine beta-synthase of Mycobacterium tuberculosis.
Classification: LYASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-04-30
Authors: Bandyopadhyay, P., Pramanick, I., Biswas, R., Sabarinath, P.S., Sreedharan, S., Singh, S., Rajmani, R., Laxman, S., Dutta, S., Singh, A.
PDB entry 7xo0: Minor polymorph inalpha-synuclein fibril seeded by cerebrospinal fluid from a mid-to-late stage (mid-PD-1) Parkinson's disease patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-04-30
Authors: Fan, Y., Sun, Y.P., Wang, J., Liu, C.
PDB entry 7xo1: Major polymorph in alpha-synuclein fibril seeded by cerebrospinal fluid from a mid-to-late stage (mid-PD-1) Parkinson's disease patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-04-30
Authors: Fan, Y., Sun, Y.P., Wang, J., Liu, C.
PDB entry 7xo2: Minor polymorph in alpha-synuclein fibril seeded by cerebrospinal fluid from a mid-to-late stage (mid-PD-4) Parkinson's disease patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-04-30
Authors: Fan, Y., Sun, Y.P., Wang, J., Liu, C.
PDB entry 7xo3: Type 1C alpha-synuclein fibril seeded by cerebrospinal fluid from a mid-to-late stage (mid-PD-4) Parkinson's disease patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-04-30
Authors: Fan, Y., Sun, Y.P., Wang, J., Liu, C.
PDB entry 7xo4: SARS-CoV-2 Omicron BA.1 Variant Spike Trimer with two mouse ACE2 Bound
Classification: VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2022-04-30
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xo5: SARS-CoV-2 Omicron BA.1 Variant Spike Trimer with one mouse ACE2 Bound
Classification: VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2022-05-01
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xo6: SARS-CoV-2 Omicron BA.1 Variant RBD with mouse ACE2 Bound
Classification: VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-05-01
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xo7: SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with two human ACE2 Bound
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2022-05-01
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xo8: SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with three human ACE2 Bound
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2022-05-01
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xo9: SARS-CoV-2 Omicron BA.2 Variant RBD complexed with human ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-05-01
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xoa: SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with one mouse ACE2 Bound
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-01
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xob: SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with two mouse ACE2 Bound
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-05-01
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xoc: SARS-CoV-2 Omicron BA.2 Variant RBD complexed with mouse ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-05-01
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xod: SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with three JMB2002 Fab Bound
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2022-05-01
Authors: Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E.
PDB entry 7xoe: Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-05-01
Authors: Wu, Z., Yu, Z., Tan, S., Lu, J., Lu, G., Lin, J.
PDB entry 7xof: Crystal structure of Oryza sativa plastid glycyl-tRNA synthetase
Classification: LIGASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2022-05-01
Authors: Yu, Z., Lu, G., Li, J.
PDB entry 7xog: Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-05-01
Authors: Wu, Z., Yu, Z., Tan, S., Lu, J., Lu, G., Lin, J.
PDB entry 7xoh: Cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine.
Classification: LYASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-05-01
Authors: Bandyopadhyay, P., Pramanick, I., Biswas, R., Sabarinath, P.S., Sreedharan, S., Singh, S., Rajmani, R., Laxman, S., Dutta, S., Singh, A.
PDB entry 7xoi: Aspergillus sojae alpha-glucosidase AsojAgdL in complex with trehalose
Classification: HYDROLASE
Source organism: Aspergillus sojae NBRC 4239
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-05-01
Authors: Tonozuka, T.
PDB entry 7xoj: Cryo-EM structure of GroEL bound to unfolded substrate (UGT1A) at 2.8 Ang. resolution (Consensus Refinement)
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xok: Cryo-EM structure of double occupied ring (DOR) of GroEL-UGT1A complex at 2.7 Ang. resolution
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xol: Cryo-EM structure of single empty ring 2 (SER2) of GroEL-UGT1A complex at 3.2 Ang. resolution
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xom: Cryo-EM structure of occupied ring subunit 4 (OR4) of GroEL complexed with polyalanine model of UGT1A from GroEL-UGT1A double occupied ring complex
Classification: CHAPERONE
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xon: Cryo-EM structure of empty ring subunit 1 (ER1) from single empty ring of GroEL-UGT1A complex
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xoo: Cryo-EM structure of empty ring subunit 2 (ER2) from GroEL-UGT1A single empty ring complex
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xop: Cryo-EM structure of occupied ring subunit 1 (OR1) of GroEL from GroEL-UGT1A double occupied ring complex
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xoq: Cryo-EM structure of occupied ring subunit 2 (OR2) of GroEL from GroEL-UGT1A double occupied ring complex
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xor: Cryo-EM structure of occupied ring subunit 3 (OR3) of GroEL from GroEL-UGT1A double occupied ring complex
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xos: Cryo-EM structure of occupied ring subunit 4 (OR4) of GroEL from GroEL-UGT1A double occupied ring complex
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-01
Authors: Stapleton, K., Takagi, J., Mizohata, E.
PDB entry 7xot: Crystal structure of Keap1_6k
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-05-01
Authors: Xu, K.
PDB entry 7xou: Structural insights into human brain gut peptide cholecystokinin receptors
Classification: NEUROPEPTIDE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-01
Authors: Ding, Y., Zhang, H., Liao, Y., Chen, L., Ji, S.
PDB entry 7xov: Structural insights into human brain gut peptide cholecystokinin receptors
Classification: NEUROPEPTIDE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-05-01
Authors: Ding, Y., Zhang, H., Liao, Y., Chen, L., Ji, S.
PDB entry 7xow: Structural insights into human brain gut peptide cholecystokinin receptors
Classification: NEUROPEPTIDE
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-05-01
Authors: Ding, Y., Zhang, H., Liao, Y., Chen, L., Ji, S.