LiteFold/PDB huggingface dataset:
PDB entry 6xfp: Crystal Structure of BRAF kinase domain bound to Belvarafenib
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-06-16
Authors: Yin, J., Sudhamsu, J.
PDB entry 6xfq: Structure of a novel antithrombotic agent Agkisacucetin in complex with the platelet glycoprotein Ib receptor
Classification: STRUCTURAL PROTEIN
Source organism: Deinagkistrodon acutus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2020-06-16
Authors: Wang, J., Gao, Y.X., Ke, J.Y., Zhu, Z.L., Niu, L.W.
PDB entry 6xfr: Metallo-beta-lactamase from Pontibacter korlensis
Classification: HYDROLASE
Source organism: Pontibacter korlensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.608 Å
Deposited: 2020-06-16
Authors: Schenk, G., Schembri, M.A., Prombhul, S.
PDB entry 6xfs: Class C beta-lactamase from Escherichia coli in complex with Tazobactam
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-06-16
Authors: Chang, C., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6xft: Crystal Structure of the Cys-NO Modified YopH Tyrosine Phosphatase
Classification: HYDROLASE
Source organism: Yersinia enterocolitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2020-06-16
Authors: Fernandes, R., Pereira, H.M., Thiemann, O., Terenzi, H.
PDB entry 6xfu: PmtCD peptide exporter basket domain
Classification: MEMBRANE PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-06-16
Authors: Zeytuni, N., Strynadka, N.C.J., Alexander, J.A.N.
PDB entry 6xfv: CRYSTAL STRUCTURE OF RAR-RELATED ORPHAN RECEPTOR C IN COMPLEX WITH A NOVEL INVERSE AGONIST
Classification: TRANSCRIPTION/Agonist
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-06-16
Authors: Sack, J.S.
PDB entry 6xfw: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J24 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.053 Å
Deposited: 2020-06-16
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xfx: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J26 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.129 Å
Deposited: 2020-06-16
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xfy: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J28 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.057 Å
Deposited: 2020-06-16
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xfz: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J29 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.113 Å
Deposited: 2020-06-16
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xg0: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J31 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.178 Å
Deposited: 2020-06-16
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xg1: Class C beta-lactamase from Escherichia coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2020-06-16
Authors: Chang, C., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6xg3: The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, at room temperature
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2020-06-16
Authors: Osipiuk, J., Tesar, C., Jedrzejczak, R., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6xg4: X-ray structure of Escherichia coli dihydrofolate reductase L28R mutant in complex with trimethoprim
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-06-16
Authors: Gaszek, I.K., Manna, M.S., Borek, D., Toprak, E.
PDB entry 6xg5: X-ray structure of Escherichia coli dihydrofolate reductase in complex with trimethoprim
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-16
Authors: Gaszek, I.K., Manna, M.S., Borek, D., Toprak, E.
PDB entry 6xg6: Full-length human mitochondrial Hsp90 (TRAP1) with ADP-BeF3
Classification: CHAPERONE
Source organism: Homo sapiens; Streptococcus pyogenes
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-06-17
Authors: Liu, Y.X., Wang, F., Agard, D.A.
PDB entry 6xg7: 1.3 A Resolution Structure of the of the NHL Repeat Region of D. melanogaster Thin
Classification: PROTEIN BINDING
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-06-17
Authors: Kashipathy, M.M., Lovell, S., Battaile, K.P., Bawa, S., Geisbrecht, E.R.
PDB entry 6xg8: ISCth4 transposase, pre-cleaved complex, PCC
Classification: RECOMBINATION
Source organism: Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2020-06-17
Authors: Kosek, D., Dyda, F.
PDB entry 6xgc: CryoEM structure of influenza hemagglutinin A/Michigan/45/2015 in complex with cyno antibody 1C4
Classification: ANTIVIRAL PROTEIN
Source organism: Influenza A virus (A/Michigan/45/2015(H1N1)); Macaca fascicularis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-06-17
Authors: Qiu, Y., Zhou, Y.
PDB entry 6xgf: Escherichia coli transcription-translation complex B (TTC-B) containing an 30 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2020-06-17
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6xgj: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J32 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.071 Å
Deposited: 2020-06-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xgk: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J35 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.063 Å
Deposited: 2020-06-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xgl: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J36 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.173 Å
Deposited: 2020-06-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xgm: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J25 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2020-06-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xgn: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J33 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2020-06-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xgo: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J34 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-06-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xgp: YSD1_17 major capsid protein
Classification: VIRAL PROTEIN
Source organism: Bacteriophage sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-06-17
Authors: Grinter, R., Hardy, J.M., Dunstan, R., Lithgow, T.J., Coulibaly, F.J.
PDB entry 6xgq: YSD1 bacteriophage capsid
Classification: VIRUS
Source organism: Bacteriophage sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-06-17
Authors: Hardy, J.M., Dunstan, R., Venugopal, H., Lithgow, T.J., Coulibaly, F.J.
PDB entry 6xgr: YSD1 major tail protein
Classification: VIRAL PROTEIN
Source organism: Bacteriophage sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-06-17
Authors: Hardy, J.M., Dunstan, R., Venugopal, H., Lithgow, T.J., Coulibaly, F.J.
PDB entry 6xgs: Crystal Structure of Dihydrodipicolinate synthase (DHDPS) from Brucella suis 1330
Classification: BIOSYNTHETIC PROTEIN, LYASE
Source organism: Brucella suis biovar 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-06-18
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6xgt: Crystal structure of cyanase from the thermophilic fungus Thermomyces lanuginosus
Classification: HYDROLASE
Source organism: Thermomyces lanuginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-06-18
Authors: Choi, P.H., Ranjan, B., Tong, L.
PDB entry 6xgu: Crystal Structure of KRAS-Q61R (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF
Classification: ONCOPROTEIN/Transferase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-06-18
Authors: Tran, T.H., Chan, A.H., Dharmaiah, S., Simanshu, D.K.
PDB entry 6xgv: Crystal Structure of KRAS-G13D (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF
Classification: ONCOPROTEIN/Transferase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2020-06-18
Authors: Tran, T.H., Chan, A.H., Dharmaiah, S., Simanshu, D.K.
PDB entry 6xgw: ISCth4 transposase, pre-reaction complex, PRC
Classification: RECOMBINATION
Source organism: Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2020-06-18
Authors: Kosek, D., Dyda, F.
PDB entry 6xgx: ISCth4 transposase, strand transfer complex 1, STC1
Classification: RECOMBINATION
Source organism: Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2020-06-18
Authors: Kosek, D., Dyda, F.
PDB entry 6xgy: Crystal structure of E. coli MlaFB ABC transport subunits in the dimeric state
Classification: LIPID TRANSPORT
Source organism: Escherichia coli; Escherichia coli LAU-EC10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-06-18
Authors: Chang, Y., Bhabha, G., Ekiert, D.C.
PDB entry 6xgz: Crystal structure of E. coli MlaFB ABC transport subunits in the monomeric state
Classification: LIPID TRANSPORT
Source organism: Escherichia coli; Escherichia coli LAU-EC10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-06-18
Authors: Chang, Y., Bhabha, G., Ekiert, D.C.
PDB entry 6xh0: Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.9
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2020-06-18
Authors: Chavali, S.S., Jenkins, J.L., Wedekind, J.E.
PDB entry 6xh1: Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.7 mutant
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2020-06-18
Authors: Chavali, S.S., Jenkins, J.L., Wedekind, J.E.
PDB entry 6xh2: Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM 6.6
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2020-06-18
Authors: Chavali, S.S., Jenkins, J.L., Wedekind, J.E.
PDB entry 6xh3: Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.3
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.353 Å
Deposited: 2020-06-18
Authors: Chavali, S.S., Jenkins, J.L., Wedekind, J.E.
PDB entry 6xh5: Hierarchical design of multi-scale protein complexes by combinatorial assembly of oligomeric helical bundle and repeat protein building blocks
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2020-06-18
Authors: Bera, A.K., Hsia, Y., Kang, A.S., Baker, D.
PDB entry 6xh7: CueR-TAC without RNA
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-06-18
Authors: Liu, B., Shi, W., Yang, Y.
PDB entry 6xh8: CueR-transcription activation complex with RNA transcript
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-06-18
Authors: Liu, B., Shi, W., Yang, Y.
PDB entry 6xh9: Crystal structure of S. aureus TarJ
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-06-18
Authors: Li, F.K.K., Strynadka, N.C.J.
PDB entry 6xha: Crystal Structure of KRAS-G12V (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF
Classification: ONCOPROTEIN/Transferase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2020-06-18
Authors: Tran, T.H., Chan, A.H., Dharmaiah, S., Simanshu, D.K.
PDB entry 6xhb: Crystal Structure of wild-type KRAS (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF (crystal form II)
Classification: ONCOPROTEIN/Transferase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-06-18
Authors: Tran, T.H., Chan, A.H., Dharmaiah, S., Simanshu, D.K.
PDB entry 6xhc: Structure of glycinyl 5'-O-adenosine phosphoramidate
Classification: RNA BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-06-18
Authors: Pallan, P.S., Egli, M.
PDB entry 6xhd: Structure of Prolinyl-5'-O-adenosine phosphoramidate
Classification: RNA BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2020-06-18
Authors: Pallan, P.S., Egli, M.
PDB entry 6xhe: Structure of beta-prolinyl 5'-O-adenosine phosphoramidate
Classification: RNA BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2020-06-18
Authors: Pallan, P.S., Egli, M.
PDB entry 6xhf: Structure of Phenylalanyl-5'-O-adenosine phosphoramidate
Classification: RNA BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-06-18
Authors: Pallan, P.S., Egli, M.
PDB entry 6xhg: Far-red absorbing dark state of JSC1_58120g3 with bound biliverdin IXa (BV)
Classification: SIGNALING PROTEIN
Source organism: [Leptolyngbya] sp. JSC-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-06-18
Authors: Moreno, M.V., Rockwell, N.C., Fisher, A.J., Lagarias, J.C.
PDB entry 6xhh: Far-red absorbing dark state of JSC1_58120g3 with bound 18-1, 18-2 dihydrobiliverdin IXa (DHBV), the native chromophore precursor
Classification: SIGNALING PROTEIN
Source organism: [Leptolyngbya] sp. JSC-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-06-18
Authors: Moreno, M.V., Rockwell, N.C., Fisher, A.J., Lagarias, J.C.
PDB entry 6xhi: Cryo-EM structure of octadecameric TF55 (beta-only) complex from S. solfataricus bound to ADP
Classification: CHAPERONE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.19 Å
Deposited: 2020-06-18
Authors: Zeng, Y.C., Sobti, M., Stewart, A.G.
PDB entry 6xhj: Cryo-EM structure of octadecameric TF55 (beta-only) complex from S. solfataricus bound to ATP
Classification: CHAPERONE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2020-06-18
Authors: Zeng, Y.C., Sobti, M., Stewart, A.G.
PDB entry 6xhk: Crystal structure of S. aureus TarJ in complex with NADPH
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus (strain NCTC 8325)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-06-18
Authors: Li, F.K.K., Strynadka, N.C.J.
PDB entry 6xhl: Covalent complex of SARS-CoV main protease with N-[(2S)-1-({(2S,3S)-3,4-dihydroxy-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide
Classification: VIRAL PROTEIN
Source organism: Human SARS coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.471 Å
Deposited: 2020-06-19
Authors: Gajiwala, K.S., Ferre, R.A., Ryan, K., Stewart, A.E.
PDB entry 6xhm: Covalent complex of SARS-CoV-2 main protease with N-[(2S)-1-({(2S,3S)-3,4-dihydroxy-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.406 Å
Deposited: 2020-06-19
Authors: Gajiwala, K.S., Ferre, R.A., Ryan, K., Stewart, A.E.
PDB entry 6xhn: Covalent complex of SARS-CoV main protease with 4-methoxy-N-[(2S)-4-methyl-1-oxo-1-({(2S)-3-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}amino)pentan-2-yl]-1H-indole-2-carboxamide
Classification: VIRAL PROTEIN
Source organism: Human SARS coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.377 Å
Deposited: 2020-06-19
Authors: Gajiwala, K.S., Ferre, R.A., Ryan, K., Stewart, A.E.
PDB entry 6xho: Covalent complex of SARS-CoV main protease with ethyl (4R)-4-({N-[(4-methoxy-1H-indol-2-yl)carbonyl]-L-leucyl}amino)-5-[(3S)-2-oxopyrrolidin-3-yl]pentanoate
Classification: VIRAL PROTEIN
Source organism: Human SARS coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.446 Å
Deposited: 2020-06-19
Authors: Gajiwala, K.S., Ferre, R.A., Ryan, K., Stewart, A.E.
PDB entry 6xhp: Crystal structure of S. aureus TarI (space group C121)
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-19
Authors: Li, F.K.K., Strynadka, N.C.J.
PDB entry 6xhq: Crystal structure of S. aureus TarI in complex with CDP-ribitol (space group C121)
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-06-19
Authors: Li, F.K.K., Strynadka, N.C.J.
PDB entry 6xhr: Crystal structure of S. aureus TarI (space group P1211)
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-06-19
Authors: Li, F.K.K., Strynadka, N.C.J.
PDB entry 6xhs: Crystal structure of S. aureus TarI in complex with CTP (space group P1211)
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-06-19
Authors: Li, F.K.K., Strynadka, N.C.J.
PDB entry 6xht: Crystal structure of S. aureus TarI in complex with CDP-ribitol (space group P1211)
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-19
Authors: Li, F.K.K., Strynadka, N.C.J.
PDB entry 6xhu: Room temperature X-ray crystallography reveals oxidation and reactivity of cysteine residues in SARS-CoV-2 3CL Mpro: Insights for enzyme mechanism and drug design
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-19
Authors: Kneller, D.W., Coates, L., Kovalevsky, A.
PDB entry 6xhv: Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution
Classification: RIBOSOME
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-06-19
Authors: Svetlov, M.S., Syroegin, E.A., Aleksandrova, E.V., Atkinson, G.C., Gregory, S.T., Mankin, A.S., Polikanov, Y.S.
PDB entry 6xhw: Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-06-19
Authors: Svetlov, M.S., Syroegin, E.A., Aleksandrova, E.V., Atkinson, G.C., Gregory, S.T., Mankin, A.S., Polikanov, Y.S.
PDB entry 6xhx: Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolution
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12); Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-06-19
Authors: Svetlov, M.S., Syroegin, E.A., Aleksandrova, E.V., Atkinson, G.C., Gregory, S.T., Mankin, A.S., Polikanov, Y.S.
PDB entry 6xhy: Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-06-19
Authors: Svetlov, M.S., Syroegin, E.A., Aleksandrova, E.V., Atkinson, G.C., Gregory, S.T., Mankin, A.S., Polikanov, Y.S.
PDB entry 6xhz: Alpha-lytic protease homolog N4
Classification: UNKNOWN FUNCTION
Source organism: Streptomyces monomycini
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-06-19
Authors: Nixon, C.F., Marqusee, S.M., Gee, C.L.
PDB entry 6xi0: R. capsulatus cyt bc1 (CIII2) at 3.3A
Classification: OXIDOREDUCTASE
Source organism: Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-06-19
Authors: Steimle, S., Van Eeuwen, T., Ozturk, Y., Kim, H.J., Braitbard, M., Selamoglu, N., Garcia, B.A., Schneidman-Duhovny, D., Murakami, K., Daldal, F.
PDB entry 6xi1: Crystal structure of tetra-tandem repeat in extending RTX adhesin from Aeromonas hydrophila
Classification: METAL BINDING PROTEIN
Source organism: Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-06-19
Authors: Ye, Q., Vance, T.D.R., Conroy, B., Davies, P.L.
PDB entry 6xi2: Apo form of POMGNT2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2020-06-19
Authors: Halmo, S.M., Yeh, J., Wells, L., Moremen, K.W., Lanzilotta, W.N.
PDB entry 6xi3: Crystal structure of tetra-tandem repeat in extending region of large adhesion protein
Classification: METAL BINDING PROTEIN
Source organism: Marinobacter hydrocarbonoclasticus (strain ATCC 49840 / DSM 8798 / SP17)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-06-19
Authors: Ye, Q., Vance, T.D.R., Davies, P.L.
PDB entry 6xi4: Crystal structure of Maf domain of human N-acetylserotonin O-methyltransferase-like protein soaked with TFBQ
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2020-06-19
Authors: Stogios, P.J., Evdokimova, E., Yakunin, A., Savchenko, A.
PDB entry 6xi5: Crystal structure of human N-acetylserotonin O-methyltransferase-like protein soaked with PDHPTAO
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2020-06-19
Authors: Stogios, P.J., Evdokimova, E., Yakunin, A., Savchenko, A.
PDB entry 6xi6: Hierarchical design of multi-scale protein complexes by combinatorial assembly of oligomeric helical bundle and repeat protein building blocks
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2020-06-19
Authors: Bera, A.K., Hsia, Y., Kang, A.S., Shankaran, B., Baker, D.
PDB entry 6xi7: Crystal Structure of wild-type KRAS (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF (crystal form I)
Classification: ONCOPROTEIN, Transferase/Hydrolase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-06-19
Authors: Chan, A.H., Tran, T.H., Dharmaiah, S., Simanshu, D.K.
PDB entry 6xi8: Yeast TFIIK (Kin28/Ccl1/Tfb3) Complex
Classification: Transciption/Transferase
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2020-06-19
Authors: van Eeuwen, T., Murakami, K., Li, T., Tsai, K.L.
PDB entry 6xi9: X-ray crystal structure of MqnE from Pedobacter heparinus in complex with aminofutalosine and methionine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2020-06-19
Authors: Grove, T.L., Bonanno, J.B., Almo, S.C.
PDB entry 6xia: REFINEMENT OF GLUCOSE ISOMERASE FROM STREPTOMYCES ALBUS AT 1.65 ANGSTROMS WITH DATA FROM AN IMAGING PLATE
Classification: ISOMERASE(INTRAMOLECULAR OXIDOREDUCTASE)
Source organism: Streptomyces albus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 1990-09-13
Authors: Dauter, Z., Terry, H., Wilson, K.S.
PDB entry 6xib: PCSK9(deltaCRD) in complex with cyclic peptide 30
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.546 Å
Deposited: 2020-06-19
Authors: Orth, P.
PDB entry 6xic: PCSK9(deltaCRD) in complex with cyclic peptide 40
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.377 Å
Deposited: 2020-06-19
Authors: Orth, P.
PDB entry 6xid: PCSK9(deltaCRD) in complex with cyclic peptide 51
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.482 Å
Deposited: 2020-06-19
Authors: Orth, P.
PDB entry 6xie: PCSK9(deltaCRD) in complex with cyclic peptide 77
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2020-06-19
Authors: Orth, P.
PDB entry 6xif: PCSK9(deltaCRD) in complex with cyclic peptide 83
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.774 Å
Deposited: 2020-06-19
Authors: Orth, P.
PDB entry 6xig: X-ray crystal structure of MqnE from Pedobacter heparinus
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2020-06-19
Authors: Grove, T.L., Bonanno, J.B., Almo, S.C.
PDB entry 6xih: Structure-guided optimization of a novel class of ASK1 inhibitors with increased sp3 character and an exquisite selectivity profile
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-06-19
Authors: Dougan, D.R.
PDB entry 6xii: Escherichia coli transcription-translation complex B (TTC-B) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2020-06-20
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6xij: Escherichia coli transcription-translation complex A (TTC-A) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2020-06-20
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6xim: PROTEIN ENGINEERING OF XYLOSE (GLUCOSE) ISOMERASE FROM ACTINOPLANES MISSOURIENSIS. 1. CRYSTALLOGRAPHY AND SITE-DIRECTED MUTAGENESIS OF METAL BINDING SITES
Classification: ISOMERASE(INTRAMOLECULAR OXIDOREDUCTASE)
Source organism: Actinoplanes missouriensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1992-04-03
Authors: Janin, J.
PDB entry 6xin: The crystal structure of tryptophan synthase from Salmonella enterica serovar typhimurium in complex with (2S)-3-Amino-3-imino-2-phenyldiazenylpropanamide at the enzyme alpha-site.
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-06-20
Authors: Hilario, E., Chang, C., Mueller, L.J., Dunn, M.F., Fan, L.
PDB entry 6xio: ADP-dependent kinase complex with fructose-6-phosphate and ADPbetaS
Classification: TRANSFERASE
Source organism: Methanosarcinales archaeon
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2020-06-20
Authors: Munoz, S., Gonzalez-Ordenes, F., Fuentes, N., Maturana, P., Herrera-Morande, A., Villalobos, P., Castro-Fernandez, V.
PDB entry 6xip: The 1.5 A Crystal Structure of the Co-factor Complex of NSP7 and the C-terminal Domain of NSP8 from SARS CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-06-20
Authors: Wilamowski, M., Kim, Y., Jedrzejczak, R., Maltseva, N., Endres, M., Godzik, A., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6xiq: Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-06-21
Authors: Zhou, Y., Bartesaghi, A., Silva, G.M.
PDB entry 6xir: Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-06-21
Authors: Zhou, Y., Bartesaghi, A., Silva, G.M.
PDB entry 6xis: Cryo-EM structure of the G protein-gated inward rectifier K+ channel GIRK2 (Kir3.2) in apo form
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-06-21
Authors: Niu, Y., Tao, X., MacKinnon, R.
PDB entry 6xit: Cryo-EM structure of the G protein-gated inward rectifier K+ channel GIRK2 (Kir3.2) in complex with PIP2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-06-21
Authors: Niu, Y., Tao, X., MacKinnon, R.
PDB entry 6xiu: ETEC Rns bound to a potential inhibitor, decanoic acid
Classification: DNA BINDING PROTEIN/INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-06-22
Authors: Midgett, C.R., Kull, F.J.
PDB entry 6xiv: SeMet-Rns, in complex with potential inhibitor
Classification: DNA BINDING PROTEIN/INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-06-22
Authors: Midgett, C.R., Kull, F.J.
PDB entry 6xiw: Cryo-EM structure of the sodium leak channel NALCN-FAM155A complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-06-22
Authors: Kschonsak, M., Chua, H.C., Noland, C.L., Weidling, C., Clairfeuille, T., Bahlke, O.O., Ameen, A.O., Li, Z.R., Arthur, C.P., Ciferri, C., Pless, S.A., Payandeh, J.
PDB entry 6xix: Triuret Hydrolase (TrtA) from Herbaspirillum sp. BH-1
Classification: HYDROLASE
Source organism: Herbaspirillum sp. BH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-06-22
Authors: Tassoulas, L.T., Elias, M.H., Wackett, L.P.
PDB entry 6xiy: Crystal Structure of the Carbohydrate Recognition Domain of the Human Macrophage Galactose C-Type Lectin Bound to methyl 2-(acetylamino)-2-deoxy-1-thio-alpha-D-galactopyranose
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.307 Å
Deposited: 2020-06-22
Authors: Birrane, G., Murphy, P.V., Gabba, A., Luz, J.G.
PDB entry 6xiz: Crystal structure of multi-copper oxidase from Pediococcus acidilactici
Classification: OXIDOREDUCTASE
Source organism: Pediococcus acidilactici
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-22
Authors: Pardo, I., Soares, A.S., Collins, R., Partowmah, S.H., Coler, E.A.
PDB entry 6xj0: Crystal structure of multi-copper oxidase from Pediococcus pentosaceus
Classification: OXIDOREDUCTASE
Source organism: Pediococcus pentosaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2020-06-22
Authors: Pardo, I., Soares, A.S., Collins, R., Partowmah, S.H., Coler, E.A.
PDB entry 6xj1: Crystal Structure of CDC15 F-BAR Domain from Schizosaccharomyces pombe
Classification: CELL CYCLE
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.52 Å
Deposited: 2020-06-22
Authors: Chandra, M., Jackson, L.P., Snider, C.E., Gould, K.L.
PDB entry 6xj3: Crystal structure of Class D beta-lactamase from Klebsiella quasipneumoniae in complex with avibactam
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae 700603
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-06-22
Authors: Chang, C., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6xj4: Triuret Hydrolase (TrtA) from Herbaspirillum sp. BH-1 C162S bound with biuret
Classification: HYDROLASE
Source organism: Herbaspirillum sp. BH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2020-06-22
Authors: Tassoulas, L.T., Elias, M.H., Wackett, L.P.
PDB entry 6xj5: Carboxypeptidase G2 modified with a versatile bioconjugate for metalloprotein design
Classification: HYDROLASE
Source organism: Pseudomonas sp. (strain RS-16)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2020-06-22
Authors: Yachnin, B.J., Hansen, W.A., Khare, S.D.
PDB entry 6xj6: Crystal structure of the helical cell shape determining protein Pgp2 from Campylobacter jejuni
Classification: HYDROLASE
Source organism: Campylobacter jejuni subsp. jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.497 Å
Deposited: 2020-06-23
Authors: Lin, C.S., Chan, A.C., Murphy, M.E.
PDB entry 6xj7: Crystal structure of the helical cell shape determining protein Pgp2 (K307A mutant) from Campylobacter jejuni
Classification: HYDROLASE
Source organism: Campylobacter jejuni subsp. jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-06-23
Authors: Lin, C.S., Chan, A.C., Murphy, M.E.
PDB entry 6xj8: KPC-2 N170A mutant bound to hydrolyzed imipenem at 2.05 A
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-06-23
Authors: Pemberton, O.A., Chen, Y.
PDB entry 6xj9: Structure of PfGH50B
Classification: HYDROLASE
Source organism: Pseudoalteromonas fuliginea
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-06-23
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 6xja: Streptococcus Pneumoniae IgA1 Protease with IgA1 substrate
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-06-23
Authors: Eisenmesser, E.Z., Zheng, H.
PDB entry 6xjb: IgA1 Protease
Classification: IMMUNE SYSTEM
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-06-23
Authors: Eisenmesser, E.Z., Zheng, H.
PDB entry 6xjd: Two mouse cGAS catalytic domain binding to human assembled nucleosome
Classification: IMMUNE SYSTEM/DNA
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.8 Å
Deposited: 2020-06-23
Authors: Xu, P., Li, P., Zhao, B.
PDB entry 6xje: Triuret Hydrolase (TrtA) from Herbaspirillum sp. BH-1 C162S bound with triuret
Classification: HYDROLASE
Source organism: Herbaspirillum sp. BH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-06-23
Authors: Tassoulas, L.T., Elias, M.H., Wackett, L.P.
PDB entry 6xjf: X-ray crystal structure of Pyrococcus furiosus general transcription factor TFE-alpha (SeMet labeled protein)
Classification: TRANSCRIPTION
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-06-23
Authors: Murakami, K.S., Jun, S.H.
PDB entry 6xjh: PmtCD ABC exporter without the basket domain at C2 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-06-23
Authors: Zeytuni, N., Strynadka, N.J.C., Hu, J., Worrall, L.J., Chou, H., Yu, Z.
PDB entry 6xji: PmtCD ABC exporter at C1 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-06-23
Authors: Zeytuni, N., Strynadka, N.J.C., Hu, J., Worrall, L.J., Chou, H., Yu, Z.
PDB entry 6xjj: Structure of non-heme iron enzyme TropC: Radical tropolone biosynthesis
Classification: OXIDOREDUCTASE
Source organism: Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-06-24
Authors: Mallik, L., Doyon, T.J., Narayan, A.R.H., Koutmos, M.
PDB entry 6xjk: JAK2 JH2 in complex with JAK067
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02351 Å
Deposited: 2020-06-24
Authors: Puleo, D.E., Krimmer, S.G., Newton, A.S., Schlessinger, J., Jorgensen, W.L.
PDB entry 6xjl: Structure of the SM protein Vps45
Classification: TRANSPORT PROTEIN
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-06-24
Authors: Jeffrey, P.D., Shimamura, G.S., Allen, F., Hughson, F.M.
PDB entry 6xjm: Biuret Hydrolase (BiuH) from Rhodococcus sp. Mel C169S bound with biuret
Classification: HYDROLASE
Source organism: Rhodococcus sp. Mel
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-06-24
Authors: Tassoulas, L.T., Elias, M.H., Wackett, L.P.
PDB entry 6xjn: Human atlastin-1 (residues 1-439) bound to GDP-Mg2+ exhibits an ordered amino terminus
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-06-24
Authors: O'Donnell, J.P., Sondermann, H.
PDB entry 6xjo: Human atlastin-3 (residues 1-334) bound to GDP-Mg2+ exhibits an ordered amino terminus
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-06-24
Authors: O'Donnell, J.P., Sondermann, H.
PDB entry 6xjp: Crystal Structure of KPT-185 bound to CRM1 (537-DLTVK-541 to GLCEQ)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.802 Å
Deposited: 2020-06-24
Authors: Baumhardt, J.M., Chook, Y.M.
PDB entry 6xjq: Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate
Classification: RNA/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.708 Å
Deposited: 2020-06-24
Authors: Koirala, D., Piccirilli, J.A.
PDB entry 6xjr: Crystal Structure of KPT-185 bound to CRM1 (E582K, 537-DLTVK-541 to GLCEQ)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.941 Å
Deposited: 2020-06-24
Authors: Baumhardt, J.M., Chook, Y.M.
PDB entry 6xjs: Crystal Structure of KPT-330 bound to CRM1 (E582K, 537-DLTVK-541 to GLCEQ)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.942 Å
Deposited: 2020-06-24
Authors: Baumhardt, J.M., Chook, Y.M.
PDB entry 6xjt: Crystal Structure of KPT-8602 bound to CRM1 (537-DLTVK-541 to GLCEQ)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.406 Å
Deposited: 2020-06-24
Authors: Baumhardt, J.M., Chook, Y.M.
PDB entry 6xju: Crystal Structure of KPT-8602 bound to CRM1 (E582K, 537-DLTVK-541 to GLCEQ)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.193 Å
Deposited: 2020-06-24
Authors: Baumhardt, J.M., Chook, Y.M.
PDB entry 6xjv: MCU holocomplex in High-calcium state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2020-06-24
Authors: Wang, Y., Jiang, Y.
PDB entry 6xjw: Crystal structure of a self-alkylating ribozyme - alkylated form without biotin moiety
Classification: RNA/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.918 Å
Deposited: 2020-06-24
Authors: Koirala, D., Piccirilli, J.A.
PDB entry 6xjx: MCU holocomplex in Low-calcium blocking state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2020-06-24
Authors: Wang, Y., Jiang, Y.
PDB entry 6xjy: Crystal structure of a self-alkylating ribozyme - short time incubation with the epoxide substrate
Classification: RNA/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.156 Å
Deposited: 2020-06-24
Authors: Koirala, D., Piccirilli, J.A.
PDB entry 6xjz: Crystal structure of a self-alkylating ribozyme - apo form
Classification: RNA/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.488 Å
Deposited: 2020-06-24
Authors: Koirala, D., Piccirilli, J.A.
PDB entry 6xk0: Albumin-dexamethasone complex
Classification: TRANSPORT PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-06-24
Authors: Czub, M.P., Majorek, K.A., Shabalin, I.G., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 6xk1: Biuret Hydrolase (BiuH) from Rhodococcus sp. Mel C169S Apo form
Classification: HYDROLASE
Source organism: Rhodococcus sp. Mel
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-06-25
Authors: Tassoulas, L.T., Elias, M.H., Wackett, L.P.
PDB entry 6xk2: Crystal structure of Ribokinase from Cryptococcus neoformans var. grubii serotype A in complex with ADP
Classification: TRANSFERASE
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-06-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6xk3: Nitric Oxide Synthase from Bacillus subtilis in complex with 7-((3-(((pyridin-2-ylmethyl)amino)methyl)phenoxy)methyl)quinolin-2-amine
Classification: OXIDOREDUCTASE/Inhibitor
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-06-25
Authors: Lewis, M.C., Poulos, T.L.
PDB entry 6xk4: Nitric Oxide Synthase from Bacillus subtilis in complex with 7-((3-(((3-(6-aminopyridin-2-yl)propyl)amino)methyl)phenoxy)methyl)quinolin-2-amine
Classification: OXIDOREDUCTASE/Inhibitor
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2020-06-25
Authors: Lewis, M.C., Poulos, T.L.
PDB entry 6xk5: Nitric Oxide Synthase from Bacillus subtilis in complex with 7-((3-(((4-(6-aminopyridin-2-yl)butyl)amino)methyl)phenoxy)methyl)quinolin-2-amine
Classification: OXIDOREDUCTASE/Inhibitor
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2020-06-25
Authors: Lewis, M.C., Poulos, T.L.
PDB entry 6xk6: Nitric Oxide Synthase from Bacillus subtilis in complex with 7-((3-(((2-(pyridin-2-yl)ethyl)amino)methyl)phenoxy)methyl)quinolin-2-amine
Classification: OXIDOREDUCTASE/Inhibitor
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-06-25
Authors: Lewis, M.C., Poulos, T.L.
PDB entry 6xk7: Nitric Oxide Synthase from Bacillus subtilis in complex with 7-((3-(2-(6-aminopyridin-2-yl)ethyl)phenoxy)methyl)quinolin-2-amine
Classification: OXIDOREDUCTASE/Inhibitor
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-06-25
Authors: Lewis, M.C., Poulos, T.L.
PDB entry 6xk8: Structure of Bacillus subtilis Nitric Oxide Synthase in complex with 7-((3-((((6-aminopyridin-2-yl)methyl)amino)methyl)phenoxy)methyl)quinolin-2-amine
Classification: OXIDOREDUCTASE/Inhibitor
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-06-25
Authors: Lewis, M.C., Poulos, T.L.
PDB entry 6xk9: Cereblon in complex with DDB1, CC-90009, and GSPT1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.64 Å
Deposited: 2020-06-25
Authors: Clayton, T.L., Tran, E.T., Zhu, J., Pagarigan, B.E., Matyskiela, M.E., Chamberlain, P.P.
PDB entry 6xka: TPX2 residues 7-20 fused to Aurora A residues 116-389 dephosphorylated, and CoAlated on C290
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-06-26
Authors: Lim, D.C., Yaffe, M.B.
PDB entry 6xkb: Crystal structure of SR-related and CTD-associated factor 4(SCAF4-CID)with peptide S2,S5p-CTD
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-06-26
Authors: Zhou, M.Q., Dong, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)