LiteFold/PDB huggingface dataset:
PDB entry 7y4a: Crystal structure of human ELMO1 RBD-RhoG complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-14
Authors: Tsuda, K., Kukimoto-Niino, M., Shirouzu, M.
PDB entry 7y4b: Crystal structure of DUSP10 mutant_D59A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2022-06-14
Authors: Hu, I.C., Lyu, P.C.
PDB entry 7y4c: Crystal structure of DUSP10
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2022-06-14
Authors: Hu, I.C., Lyu, P.C.
PDB entry 7y4d: Crystal structure of DUSP10 mutant_S95A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-06-14
Authors: Hu, I.C., Lyu, P.C.
PDB entry 7y4e: Crystal structure of DUSP10 mutant_N130A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2022-06-14
Authors: Hu, I.C., Lyu, P.C.
PDB entry 7y4f: bacterial DPP4
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.918 Å
Deposited: 2022-06-14
Authors: Hang, J., Jiang, C., Wang, K., Zhang, Z., Guo, F., Liu, J., Wang, G., Lei, X., Gonzalez, F., Qiao, J.
PDB entry 7y4g: sit-bound btDPP4
Classification: HYDROLASE/INHIBITOR
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-06-14
Authors: Hang, J., Jiang, C., Wang, K., Zhang, Z., Guo, F., Liu, J., Wang, G., Lei, X., Gonzalez, F., Qiao, J.
PDB entry 7y4h: AcvX from Actinomadura viridis that exhibits deglycosylation activity on lobophorins
Classification: HYDROLASE
Source organism: Actinomadura viridis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-14
Authors: Tan, B., Zhang, L.P., Zhang, C.S.
PDB entry 7y4i: Crystal structure of SPINDLY in complex with GDP
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-06-14
Authors: Xu, S.T., Wan, L.H.
PDB entry 7y4j: HapR_Triple mutant Y76F, L97I, F171C
Classification: TRANSCRIPTION
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2022-06-14
Authors: Basu Choudhury, G., Chaudhari, V., Ray Chaudhuri, S., Datta, S.
PDB entry 7y4k: Crystal structure of Ricin A chain bound with N2-(2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-phenylalanyl-N6-((benzyloxy)carbonyl)-L-ornitine
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-06-15
Authors: Katakura, S., Goto, M., Ohba, T., Kawata, R., Nagatsu, K., Higashi, S., Matsumoto, K., Kurisu, K., Ohtsuka, K., Saito, R.
PDB entry 7y4l: PBS of PBS-PSII-PSI-LHCs from Porphyridium purpureum.
Classification: PHOTOSYNTHESIS
Source organism: Porphyridium purpureum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-15
Authors: You, X., Zhang, X., Cheng, J., Xiao, Y.N., Sun, S., Sui, S.F.
PDB entry 7y4m: Crystal structure of Ricin A chain bound with N2-(2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)glycyl-L-phenylalanyl-N6-((benzyloxy)carbonyl)-L-lysine
Classification: HYDROLASE
Source organism: Ricinus communis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-06-15
Authors: Katakura, S., Goto, M., Ohba, T., Kawata, R., Nagatsu, K., Higashi, S., Matsumoto, K., Kurisu, K., Ohtsuka, K., Saito, R.
PDB entry 7y4n: Insight into the C-terminal SH3 domain mediated binding of Drosophila Drk to Sos and Dos
Classification: PEPTIDE BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: SOLUTION NMR
Deposited: 2022-06-15
Authors: Pooppadi, M.S., Ikeya, T., Sugasawa, H., Watanabe, R., Mishima, M., Inomata, K., Ito, Y.
PDB entry 7y4o: Rat Semaphorin 6D extracellular region
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-06-15
Authors: Tanaka, T., Neyazaki, M., Nogi, T.
PDB entry 7y4p: Human Plexin A1, extracellular domains 1-4
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2022-06-15
Authors: Tanaka, T., Neyazaki, M., Nogi, T.
PDB entry 7y4q: Semaphorin 6D in complex with Plexin A1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.7 Å
Deposited: 2022-06-16
Authors: Tanaka, T., Neyazaki, M., Nogi, T.
PDB entry 7y4r: Structure of RclX
Classification: UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2022-06-16
Authors: Ki, N., Ha, N.C.
PDB entry 7y4s: Structure of human MG53 homo-dimer
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-06-16
Authors: Chen, L., Niu, Y.
PDB entry 7y4t: Crystal structure of cMET kinase domain bound by compound 9I
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2022-06-16
Authors: Qu, L.Z., Chen, Y.H.
PDB entry 7y4u: Crystal structure of cMET kinase domain bound by compound 9Y
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2022-06-16
Authors: Qu, L.Z., Chen, Y.H.
PDB entry 7y4w: The cryo-EM structure of human ERAD retro-translocation complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2022-06-16
Authors: Cao, Y., Rao, B., Wang, Q., Yao, D., Xia, Y., Li, W., Li, S., Shen, Y.
PDB entry 7y4x: Crystal structure of sDscam Ig1 domain, isoform alpha7
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.952 Å
Deposited: 2022-06-16
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y50: Class I diterpene synthase (CyS) from Streptomyces cattleya
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces cattleya
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-16
Authors: Xing, B., Ma, M.
PDB entry 7y51: Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis TTE0866 delta100 mutant
Classification: HYDROLASE
Source organism: Caldanaerobacter subterraneus subsp. tengcongensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-06-16
Authors: Sasamoto, K., Himiyama, T., Moriyoshi, K., Ohmoto, T., Uegaki, K., Nakamura, T., Nishiya, Y.
PDB entry 7y52: Crystal structure of peptidyl-tRNA hydrolase from Enterococcus faecium
Classification: HYDROLASE
Source organism: Enterococcus faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2022-06-16
Authors: Pandey, R., Zohib, M., Mundra, S., Pal, R.K., Arora, A.
PDB entry 7y53: The cryo-EM structure of human ERAD retro-translocation complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2022-06-16
Authors: Cao, Y., Rao, B., Wang, Q., Yao, D., Xia, Y., Li, W., Li, S., Shen, Y.
PDB entry 7y54: Crystal structure of sDscam Ig1 domain, isoform alpha1
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.787 Å
Deposited: 2022-06-16
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y55: Crystal structure of a glutathione S-transferase Tau1 from Pinus densata in complex with GSH
Classification: TRANSFERASE
Source organism: Pinus densata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19113 Å
Deposited: 2022-06-16
Authors: Qu, C., Zeng, Q.Y.
PDB entry 7y56: Crystal structure of NS1 nuclease domain in P41212 space group
Classification: DNA BINDING PROTEIN
Source organism: Human parvovirus B19
Experimental method: X-RAY DIFFRACTION
Resolution: 1.752 Å
Deposited: 2022-06-16
Authors: Zhang, X.Y., Gan, J.H.
PDB entry 7y57: Crystal structure of NS1 nuclease domain in P21 space group
Classification: DNA BINDING PROTEIN
Source organism: Human parvovirus B19
Experimental method: X-RAY DIFFRACTION
Resolution: 2.183 Å
Deposited: 2022-06-16
Authors: Zhang, X.Y., Gan, J.H.
PDB entry 7y58: CryoEM structure of QacA (D411N), an antibacterial efflux transporter from Staphylococcus aureus
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Camelus dromedarius; Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-06-16
Authors: Penmatsa, A., Majumder, P.
PDB entry 7y59: The cryo-EM structure of human ERAD retro-translocation complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.51 Å
Deposited: 2022-06-16
Authors: Cao, Y., Rao, B., Wang, Q., Yao, D., Xia, Y., Li, W., Li, S., Shen, Y.
PDB entry 7y5a: Cryo-EM structure of the Mycolicibacterium smegmatis F1-ATPase
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-06-16
Authors: Wong, C.F., Saw, W.-G., Grueber, G.
PDB entry 7y5b: Cryo-EM structure of F-ATP synthase from Mycolicibacterium smegmatis (rotational state 1)
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-06-16
Authors: Saw, W.-G., Wong, C.F., Grueber, G.
PDB entry 7y5c: Cryo-EM structure of F-ATP synthase from Mycolicibacterium smegmatis (rotational state 2)
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2022-06-16
Authors: Saw, W.-G., Wong, C.F., Grueber, G.
PDB entry 7y5d: Cryo-EM structure of F-ATP synthase from Mycolicibacterium smegmatis (rotational state 3) (backbone)
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.3 Å
Deposited: 2022-06-16
Authors: Saw, W.-G., Wong, C.F., Grueber, G.
PDB entry 7y5e: In situ single-PBS-PSII-PSI-LHCs megacomplex.
Classification: PHOTOSYNTHESIS
Source organism: Porphyridium purpureum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-17
Authors: You, X., Zhang, X., Cheng, J., Xiao, Y.N., Sui, S.F.
PDB entry 7y5f: Crystal structure of CmnC in complex with L-homoarginine
Classification: OXIDOREDUCTASE
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2022-06-17
Authors: Hsiao, Y.H., Huang, S.J., Lin, E.C., Lee, Y.C., Chang, C.Y.
PDB entry 7y5g: Cryo-EM structure of a eukaryotic ZnT8 in the presence of zinc
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2022-06-17
Authors: Zhang, S., Fu, C., Luo, Y., Sun, Z., Su, Z., Zhou, X.
PDB entry 7y5h: Cryo-EM structure of a eukaryotic ZnT8 at a low pH
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2022-06-17
Authors: Zhang, S., Fu, C., Luo, Y., Sun, Z., Su, Z., Zhou, X.
PDB entry 7y5i: Crystal structure of CmnC in complex with L-homoarginine
Classification: OXIDOREDUCTASE
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-06-17
Authors: Hsiao, Y.H., Huang, S.J., Lin, E.C., Lee, Y.C., Chang, C.Y.
PDB entry 7y5j: Crystal structure of sDscam Ig1 domain, isoform alpha1v7
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-17
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y5k: Crystal structure of human CAF-1 core complex in spacegroup C2221
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.48 Å
Deposited: 2022-06-17
Authors: Liu, C.P., Wang, M.Z., Xu, R.M.
PDB entry 7y5l: Crystal structure of human CAF-1 core complex in spacegroup C2
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2022-06-17
Authors: Liu, C.P., Wang, M.Z., Xu, R.M.
PDB entry 7y5m: The OTU domain of Tacheng Tick Virus 1
Classification: VIRAL PROTEIN
Source organism: Tacheng Tick Virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-17
Authors: Li, Z., Wang, W.J., Xiao, Y.S., Sun, L.T.
PDB entry 7y5n: Structure of 1:1 PAPP-A.ProMBP complex(half map)
Classification: METAL BINDING PROTEIN/HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2022-06-17
Authors: Zhong, Q.H., Chu, H.L., Wang, G.P., Zhang, C., Wei, Y., Qiao, J., Hang, J.
PDB entry 7y5o: Crystal structure of human CAF-1 core complex in spacegroup P21
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.57 Å
Deposited: 2022-06-17
Authors: Liu, C.P., Wang, M.Z., Xu, R.M.
PDB entry 7y5p: Crystal structure of CmnC in complex with L-arginine and alpha-KG
Classification: OXIDOREDUCTASE
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-06-17
Authors: Hsiao, Y.H., Huang, S.J., Lin, E.C., Lee, Y.C., Chang, C.Y.
PDB entry 7y5q: Structure of 1:1 PAPP-A.STC2 complex(half map)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli K-12; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-06-17
Authors: Zhong, Q.H., Chu, H.L., Wang, G.P., Zhang, C., Wei, Y., Qiao, J., Hang, J.
PDB entry 7y5r: Crystal structure of sDscam FNIII2 domain, isoform alpha7
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.562 Å
Deposited: 2022-06-17
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y5s: CryoEM structure of Klebsiella phage Kp7 type I tail fiber gp51 in vitro
Classification: VIRAL PROTEIN
Source organism: Klebsiella phage Kp7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-06-17
Authors: Huang, L., Xiang, Y.
PDB entry 7y5t: CryoEM structure of PS1-containing gamma-secretase in complex with MRK-560
Classification: MEMBRANE PROTEIN/HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-06-17
Authors: Guo, X., Wang, Y., Zhou, J., Jin, C., Wang, J., Jia, B., Jing, D., Yan, C., Lei, J., Zhou, R., Shi, Y.
PDB entry 7y5u: Cryo-EM structure of the monomeric human CAF1LC-H3-H4 complex
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-06-17
Authors: Liu, C.P., Yu, Z.Y., Yu, C., Xu, R.M.
PDB entry 7y5v: Cryo-EM structure of the dimeric human CAF1LC-H3-H4 complex
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2022-06-17
Authors: Liu, C.P., Yu, C., Yu, Z.Y., Xu, R.M.
PDB entry 7y5w: Cryo-EM structure of the left-handed Di-tetrasome
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-06-17
Authors: Liu, C.P., Yu, Z.Y., Yu, C., Xu, R.M.
PDB entry 7y5x: CryoEM structure of PS2-containing gamma-secretase treated with MRK-560
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-06-17
Authors: Guo, X., Wang, Y., Zhou, J., Jin, C., Wang, J., Jia, B., Jing, D., Yan, C., Lei, J., Zhou, R., Shi, Y.
PDB entry 7y5y: X-ray Structure of Stay-Green (SGR) from Anaerolineae bacterium.
Classification: PLANT PROTEIN
Source organism: Anaerolineae bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-06-18
Authors: Dey, D., Nishijima, M., Kurisu, G., Tanaka, H., Ito, H.
PDB entry 7y5z: CryoEM structure of human PS2-containing gamma-secretase
Classification: MEMBRANE PROTEIN/HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-06-18
Authors: Guo, X., Wang, Y., Zhou, J., Jin, C., Wang, J., Jia, B., Jing, D., Yan, C., Lei, J., Zhou, R., Shi, Y.
PDB entry 7y60: Cryo-EM structure of human CAF1LC bound right-handed Di-tetrasome
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-06-18
Authors: Liu, C.P., Yu, C., Yu, Z.Y., Xu, R.M.
PDB entry 7y61: Cryo-EM structure of the two CAF1LCs bound right-handed Di-tetrasome
Classification: REPLICATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2022-06-18
Authors: Liu, C.P., Yu, Z.Y., Yu, C., Xu, R.M.
PDB entry 7y62: Crystal structure of human TFEB HLHLZ domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-18
Authors: Yang, G., Li, P., Lin, Y., Liu, Z., Sun, H., Zhao, Z., Fang, P., Wang, J.
PDB entry 7y63: ApoSIDT2-pH7.4
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2022-06-18
Authors: Gong, D.S.
PDB entry 7y64: Cryo-EM structure of C5a-bound C5aR1 in complex with Gi protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-06-18
Authors: Feng, Y.Y., Zhao, C., Yan, W., Shao, Z.H.
PDB entry 7y65: Cryo-EM structure of C5a peptide-bound C5aR1 in complex with Gi protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-06-18
Authors: Feng, Y.Y., Zhao, C., Yan, W., Shao, Z.H.
PDB entry 7y66: Cryo-EM structure of BM213-bound C5aR1 in complex with Gi protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-06-18
Authors: Feng, Y.Y., Zhao, C., Yan, W., Shao, Z.H.
PDB entry 7y67: Cryo-EM structure of C089-bound C5aR1(I116A) mutant in complex with Gi protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-06-18
Authors: Feng, Y.Y., Zhao, C., Yan, W., Shao, Z.H.
PDB entry 7y68: SIDT2-pH5.5 plus miRNA
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2022-06-18
Authors: Gong, D.S.
PDB entry 7y69: ApoSIDT2-pH5.5
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2022-06-18
Authors: Gong, D.S.
PDB entry 7y6a: Crystal structure of Chicken Egg Lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-18
Authors: DeMirci, H.
PDB entry 7y6b: Crystal structure of the EscE/EsaH complex
Classification: CHAPERONE
Source organism: Edwardsiella piscicida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-18
Authors: Zeng, Z.X., Xiao, S.B., Liao, L.J., Zhou, Y.Z.
PDB entry 7y6c: Crystal structure of the EscE/EsaG/EsaH complex
Classification: CHAPERONE
Source organism: Edwardsiella piscicida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-06-18
Authors: Zeng, Z.X., Xiao, S.B., Liao, L.J., Zhou, Y.Z.
PDB entry 7y6d: Cryo-EM structure of SARS-CoV-2 Delta variant spike proteins on intact virions: 3 Closed RBD
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.39 Å
Deposited: 2022-06-20
Authors: Xu, J., Song, Y., Li, S.
PDB entry 7y6e: Crystal structure of sDscam FNIII23 domains, isoform Beta2v6
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 3.034 Å
Deposited: 2022-06-20
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y6f: Cryo-EM structure of Apo form of ScBfr
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-06-20
Authors: Jobichen, C., Sivaraman, J.
PDB entry 7y6g: Cryo-EM structure of bacterioferritin holoform 1a
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-06-20
Authors: Jobichen, C., Sivaraman, J.
PDB entry 7y6i: Cryo-EM structure of human sodium-chloride cotransporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2022-06-20
Authors: Nan, J., Yang, X., Shan, Z., Yuan, Y., Zhang, Y.Q.
PDB entry 7y6j: Crystal structure of human transthyretin variant A97S at pH 5.4
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2022-06-20
Authors: Wang, Y.S., Huang, C.H., Tzeng, S.R.
PDB entry 7y6k: Cryo-EM structure of SARS-CoV-2 receptor binding domain in complex with K202.B bispecific antibody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2022-06-20
Authors: Yoo, Y., Cho, H.S.
PDB entry 7y6l: The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab816
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-06-21
Authors: Uchikubo, T., Shirouzu, M.
PDB entry 7y6m: Intracellular Subtilisin from Bacillus sp.
Classification: HYDROLASE
Source organism: Bacillus sp. (in: Bacteria)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.703 Å
Deposited: 2022-06-21
Authors: Hussin, N., Jamaluddin, H., Jonet, M.A.
PDB entry 7y6n: The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab803
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-06-21
Authors: Uchikubo, T., Shirouzu, M.
PDB entry 7y6o: Crystal structure of sDscam Ig1-3 domains, isoform alpha25
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 3.102 Å
Deposited: 2022-06-21
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y6p: Cryo-EM structure if bacterioferritin holoform
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-21
Authors: Jobichen, C., Sivaraman, J.
PDB entry 7y6s: Cryo-EM map of IPEC-J2 cell-derived PEDV PT52 S protein with three D0-up
Classification: VIRAL PROTEIN
Source organism: Porcine epidemic diarrhea virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-21
Authors: Hsu, S.T.D., Draczkowski, P., Wang, Y.S.
PDB entry 7y6t: Cryo-EM map of IPEC-J2 cell-derived PEDV PT52 S protein one D0-down and two D0-up
Classification: VIRAL PROTEIN
Source organism: Porcine epidemic diarrhea virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-06-21
Authors: Hsu, S.T.D., Draczkowski, P., Wang, Y.S.
PDB entry 7y6u: Symmetry-expanded and locally refined protomer structure of IPEC-J2 cell-derived PEDV PT52 S with a CTD-close conformation
Classification: VIRAL PROTEIN
Source organism: Porcine epidemic diarrhea virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-06-21
Authors: Hsu, S.T.D., Draczkowski, P., Wang, Y.S.
PDB entry 7y6v: Symmetry-expanded and locally refined protomer structure of IPEC-J2 cell-derived PEDV PT52 S with a CTD-open conformation
Classification: VIRAL PROTEIN
Source organism: Porcine epidemic diarrhea virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-21
Authors: Hsu, S.T.D., Draczkowski, P., Wang, Y.S.
PDB entry 7y6w: RRGSGG-AtPRT6 UBR box (I222)
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-06-21
Authors: Kim, L., Song, H.K.
PDB entry 7y6x: RRGSGG-AtPRT6 UBR box (P32)
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.196 Å
Deposited: 2022-06-21
Authors: Kim, L., Song, H.K.
PDB entry 7y6y: RLGSGG-AtPRT6 UBR box (C121)
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.543 Å
Deposited: 2022-06-21
Authors: Kim, L., Song, H.K.
PDB entry 7y6z: RLGSGG-AtPRT6 UBR box (I222)
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.598 Å
Deposited: 2022-06-21
Authors: Kim, L., Song, H.K.
PDB entry 7y70: RLGSGG-AtPRT6 UBR box (P4332)
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2022-06-21
Authors: Kim, L., Song, H.K.
PDB entry 7y71: SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7
Classification: VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2022-06-21
Authors: Chia, W.N., Tan, C.W., Tan, A.W.K., Young, B., Starr, T.N., Lopez, E., Fibriansah, G., Barr, J., Cheng, S., Yeoh, A.Y.Y., Yap, W.C., Lim, B.L., Ng, T.S., Sia, W.R., Zhu, F., Chen, S., Zhang, J., Greaney, A.J., Chen, M., Au, G.G., Paradkar, P., Peiris, M., Chung, A.W., Bloom, J.D., Lye, D., Lok, S.M., Wang, L.F.
PDB entry 7y72: SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7 (focused refinement on Fab-RBD interface)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.03 Å
Deposited: 2022-06-21
Authors: Chia, W.N., Tan, C.W., Tan, A.W.K., Young, B., Starr, T.N., Lopez, E., Fibriansah, G., Barr, J., Cheng, S., Yeoh, A.Y.Y., Yap, W.C., Lim, B.L., Ng, T.S., Sia, W.R., Zhu, F., Chen, S., Zhang, J., Greaney, A.J., Chen, M., Au, G.G., Paradkar, P., Peiris, M., Chung, A.W., Bloom, J.D., Lye, D., Lok, S.M., Wang, L.F.
PDB entry 7y73: Crystal structure of sDscam Ig1 domain, isoform beta3v7
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2022-06-21
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y74: Apostichopus japonicus ferritin mutant-D129A/E132A
Classification: METAL BINDING PROTEIN
Source organism: Apostichopus japonicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2022-06-21
Authors: Wu, Y., Ming, T.H., Su, X.R.
PDB entry 7y75: SIT1-ACE2-BA.2 RBD
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-21
Authors: Shen, Y.P., Li, Y.N., Zhang, Y.Y., Yan, R.H.
PDB entry 7y76: SIT1-ACE2-BA.5 RBD
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-06-21
Authors: Shen, Y.P., Li, Y.N., Zhang, Y.Y., Yan, R.H.
PDB entry 7y77: Crystal structure of rice NAL1
Classification: HYDROLASE
Source organism: Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-06-21
Authors: Yan, J.J., Guan, Z.Y., Yin, P., Xiong, L.Z.
PDB entry 7y78: Crystal structure of Cry78Aa
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-06-21
Authors: Cao, B.B., Nie, Y.F., Wang, N.C., Guan, Z.Y., Zhang, D.L., Zhang, J.
PDB entry 7y79: Crystal structure of Cry78Aa
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-06-21
Authors: Cao, B.B., Nie, Y.F., Wang, N.C., Guan, Z.Y., Zhang, D.L., Zhang, J.
PDB entry 7y7a: In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.
Classification: PHOTOSYNTHESIS
Source organism: Porphyridium purpureum
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2022-06-22
Authors: You, X., Zhang, X., Cheng, J., Xiao, Y.N., Sun, S., Sui, S.F.
PDB entry 7y7b: Cryo-EM structure of cryptophyte photosystem I
Classification: PHOTOSYNTHESIS
Source organism: Chroomonas placoidea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2022-06-22
Authors: Zhao, L.S., Li, K., Zhang, Y.Z., Liu, L.N.
PDB entry 7y7c: Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)
Classification: RIBOSOME
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2022-06-22
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 7y7d: Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)
Classification: RIBOSOME
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2022-06-22
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 7y7e: Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)
Classification: RIBOSOME
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2022-06-22
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 7y7f: Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)
Classification: RIBOSOME
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2022-06-22
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 7y7g: Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)
Classification: RIBOSOME
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.34 Å
Deposited: 2022-06-22
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 7y7h: Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)
Classification: RIBOSOME
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2022-06-22
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 7y7i: chicken KNL2 in complex with the CENP-A nucleosome
Classification: NUCLEAR PROTEIN/DNA
Source organism: Gallus gallus; Homo sapiens; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2022-06-22
Authors: Ariyoshi, M., Jiang, H., Makino, F., Fukagawa, T.
PDB entry 7y7j: SARS-CoV-2 S trimer in complex with 1F Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-06-22
Authors: Zhao, S., Liu, F., Yang, X., Zhong, G.
PDB entry 7y7k: SARS-CoV-2 RBD in complex with 1F Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-06-22
Authors: Zhao, S., Liu, F., Yang, X., Zhong, G.
PDB entry 7y7l: Solution structure of zinc finger domain 2 of human ZFAND1
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-06-22
Authors: Fang, P.J., Lai, C.H., Ko, K.T., Chang, C.F., Hsu, S.T.D.
PDB entry 7y7m: The structure of coxsackievirus A16 mature virion in complex with Fab 8C4
Classification: VIRUS
Source organism: Coxsackievirus A16
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2022-06-22
Authors: Cong, Y., Liu, C.X.
PDB entry 7y7n: Crystal structure of DUF371 domain-containing protein from Methanobrevibacter ruminantium
Classification: STRUCTURAL GENOMICS
Source organism: Methanobrevibacter ruminantium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.764 Å
Deposited: 2022-06-22
Authors: Yang, Q., Lai, Z.
PDB entry 7y7o: Crystal structure of metallo-endoribonuclease YbeY from Staphylococcus aureus
Classification: HYDROLASE
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-22
Authors: Lee, J., Ha, N.-C.
PDB entry 7y7p: QDE-1 in complex with RNA template, RNA primer and AMPNPP
Classification: RNA BINDING PROTEIN
Source organism: Neurospora crassa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-06-22
Authors: Cui, R.X., Gan, J.H., Ma, J.B.
PDB entry 7y7q: QDE-1 in complex with RNA template, RNA primer and 3'-dGTP
Classification: RNA BINDING PROTEIN
Source organism: Neurospora crassa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-06-22
Authors: Cui, R.X., Gan, J.H., Ma, J.B.
PDB entry 7y7r: QDE-1 in complex with DNA template, RNA primer and 3'-dGTP
Classification: RNA BINDING PROTEIN
Source organism: Neurospora crassa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-22
Authors: Cui, R.X., Gan, J.H., Ma, J.B.
PDB entry 7y7s: QDE-1 in complex with DNA template, RNA primer and AMPNPP
Classification: RNA BINDING PROTEIN
Source organism: Neurospora crassa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-06-22
Authors: Cui, R.X., Gan, J.H., Ma, J.B.
PDB entry 7y7t: QDE-1 in complex with 12nt DNA template, ATP and 3'-dGTP
Classification: RNA BINDING PROTEIN
Source organism: Neurospora crassa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-06-22
Authors: Cui, R.X., Gan, J.H., Ma, J.B.
PDB entry 7y7u: Dimeric structure of a Quorum-Quenching metallo-hydrolase, LrsL
Classification: HYDROLASE
Source organism: Labrenzia sp. VG12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-06-22
Authors: Momin, A.A., Arold, S.T.
PDB entry 7y7v: Cryo-EM structure of human apo GABA transporter GAT1 in an inward-open state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2022-06-22
Authors: Zhu, A., Huang, J., Kong, F., Tan, J., Lei, J., Yuan, Y., Yan, C.
PDB entry 7y7w: Cryo-EM structure of human GABA transporter GAT1 bound with GABA in NaCl solution in an inward-occluded state at 2.4 angstrom
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-06-22
Authors: Zhu, A., Huang, J., Kong, F., Tan, J., Lei, J., Yuan, Y., Yan, C.
PDB entry 7y7y: Cryo-EM structure of human GABA transporter GAT1 bound with nipecotic acid in NaCl solution in an inward-occluded state at 2.4 angstrom
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-06-22
Authors: Zhu, A., Huang, J., Kong, F., Tan, J., Lei, J., Yuan, Y., Yan, C.
PDB entry 7y7z: Cryo-EM structure of human GABA transporter GAT1 bound with tiagabine in NaCl solution in an inward-open state at 3.2 angstrom
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-06-22
Authors: Zhu, A., Huang, J., Kong, F., Tan, J., Lei, J., Yuan, Y., Yan, C.
PDB entry 7y80: CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA binary complex
Classification: STRUCTURAL PROTEIN/RNA
Source organism: Candidatus Scalindua brodae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2022-06-22
Authors: Zhang, J.T., Cui, N., Huang, H.D., Jia, N.
PDB entry 7y81: CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA complex bound to non-self RNA target
Classification: STRUCTURAL PROTEIN/RNA
Source organism: Candidatus Scalindua brodae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2022-06-22
Authors: Zhang, J.T., Cui, N., Huang, H.D., Jia, N.
PDB entry 7y82: CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA complex bound to self RNA target
Classification: RNA BINDING PROTEIN
Source organism: Candidatus Scalindua brodae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2022-06-22
Authors: Zhang, J.T., Cui, N., Huang, H.D., Jia, N.
PDB entry 7y83: CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease bound to non-self RNA target
Classification: STRUCTURAL PROTEIN/RNA
Source organism: Candidatus Scalindua brodae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2022-06-22
Authors: Zhang, J.T., Cui, N., Huang, H.D., Jia, N.
PDB entry 7y84: CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease
Classification: STRUCTURAL PROTEIN/RNA
Source organism: Candidatus Scalindua brodae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2022-06-22
Authors: Zhang, J.T., Cui, N., Huang, H.D., Jia, N.
PDB entry 7y85: CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease bound to self RNA target
Classification: STRUCTURAL PROTEIN/RNA
Source organism: Candidatus Scalindua brodae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2022-06-22
Authors: Zhang, J.T., Cui, N., Huang, H.D., Jia, N.
PDB entry 7y86: CcpS mutant
Classification: GENE REGULATION
Source organism: Streptococcus suis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-22
Authors: Tang, J.S., Ran, T.T., Wang, W.W., Fan, H.J.
PDB entry 7y87: class I diterpene synthase mutant (CyS-C59A) from Streptomyces cattleya
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces cattleya
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-23
Authors: Xing, B., Ma, M.
PDB entry 7y88: class I diterpene synthase (CyS-GGPP-Mg2+) from Streptomyces cattleya
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces cattleya
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2022-06-23
Authors: Xing, B., Ma, M.
PDB entry 7y89: Structure of the GPR17-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2022-06-23
Authors: Ye, F., Chen, G.
PDB entry 7y8a: Cryo-EM structure of cryptophyte photosystem I
Classification: PHOTOSYNTHESIS
Source organism: Chroomonas placoidea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2022-06-23
Authors: Zhao, L.S., Zhang, Y.Z., Liu, L.N., Li, K.
PDB entry 7y8b: Crystal structure of CotA laccase complexed with syringic acid
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-23
Authors: Liu, Z.C., Xie, T., Wang, G.G.
PDB entry 7y8c: Crystal structure of CotA laccase complexed with syringaldehyde
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-23
Authors: Liu, Z.C., Xie, T., Wang, G.G.
PDB entry 7y8d: Crystal structure of cp1 bound BCLxl
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-23
Authors: Li, F.W., Liu, C., Wu, C.L., Wu, D.L.
PDB entry 7y8f: Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with an Inhibitor 30o and GRIP Peptide
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-06-23
Authors: Min, J., Hu, H.B., Yang, Y., Dong, C.E., Zhou, H.B., Chen, C.-C., Guo, R.-T.
PDB entry 7y8g: Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with an Inhibitor 30a and GRIP Peptide
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-06-23
Authors: Min, J., Hu, H.B., Yang, Y., Dong, C.E., Zhou, H.B., Chen, C.-C., Guo, R.-T.
PDB entry 7y8h: Crystal structure of sDscam FNIII1 domain, isoform alpha7
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-23
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y8i: Crystal structure of sDscam FNIII3 domain, isoform alpha7
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-24
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y8j: 3D1 in complex with 6-mer HR1 peptide from SARS-CoV-2
Classification: ANTIMICROBIAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2022-06-24
Authors: Lei, Y.
PDB entry 7y8k: Structure of ScIRED wild-type from Streptomyces clavuligerus
Classification: HYDROLASE
Source organism: Streptomyces clavuligerus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-06-24
Authors: Zhang, L.L., Liu, W.D., Shi, M., Huang, J.W., Yang, Y., Chen, C.C., Guo, R.T.
PDB entry 7y8l: Structure of ScIRED-R2-V3 from Streptomyces clavuligerus in complex with 5-(2,5-difluorophenyl)-3,4-dihydro-2H-pyrrole
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Streptomyces clavuligerus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2022-06-24
Authors: Zhang, L.L., Liu, W.D., Shi, M., Huang, J.W., Yang, Y., Chen, C.C., Guo, R.T.
PDB entry 7y8m: Structure of ScIRED-R2-V3 from Streptomyces clavuligerus in complex with 5-(3-fluorophenyl)-3,4-dihydro-2H-pyrrole
Classification: HYDROLASE/INHIBITOR
Source organism: Streptomyces clavuligerus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2022-06-24
Authors: Zhang, L.L., Liu, W.D., Shi, M., Huang, J.W., Yang, Y., Chen, C.C., Guo, R.T.
PDB entry 7y8n: Structure of ScIRED-R3-V4 from Streptomyces clavuligerus in complex with 5-(2,5-difluorophenyl)-3,4-dihydro-2H-pyrrole
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Streptomyces clavuligerus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-06-24
Authors: Zhang, L.L., Liu, W.D., Shi, M., Huang, J.W., Yang, Y., Chen, C.C., Guo, R.T.
PDB entry 7y8o: Structure of ScIRED-R3-V4 from Streptomyces clavuligerus in complex with 5-(3-fluorophenyl)-3,4-dihydro-2H-pyrrole
Classification: HYDROLASE/INHIBITOR
Source organism: Streptomyces clavuligerus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-24
Authors: Zhang, L.L., Liu, W.D., Shi, M., Huang, J.W., Yang, Y., Chen, C.C., Guo, R.T.
PDB entry 7y8p: Crystal structure of 4'-selenoRNA duplex
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-24
Authors: Kondo, J., Minakawa, N., Ohta, M., Takahashi, H., Tarashima, N.
PDB entry 7y8q: Amyloid-beta assemblage on GM1-containing membranes
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: SOLID-STATE NMR
Deposited: 2022-06-24
Authors: Yagi-Utsumi, M., Itoh, S.G., Okumura, H., Yanagisawa, K., Kato, K., Nishimura, K.
PDB entry 7y8r: The nucleosome-bound human PBAF complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-06-24
Authors: Wang, L., Yu, J., Yu, Z., Wang, Q., He, S., Xu, Y.
PDB entry 7y8s: Crystal structure of sDscam FNIII1-3 domains, isoform beta2v6
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.696 Å
Deposited: 2022-06-24
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y8t: Structure of Cas7-11-crRNA in complex with TPR-CHAT
Classification: IMMUNE SYSTEM/RNA
Source organism: Candidatus Scalindua brodae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-06-24
Authors: Wang, S., Guo, M., Zhu, Y., Huang, Z.
PDB entry 7y8u: Crystal structure of AlbEF homolog from Quasibacillus thermotolerans
Classification: HYDROLASE
Source organism: Quasibacillus thermotolerans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-24
Authors: Ishida, K., Nakamura, A., Kojima, S.
PDB entry 7y8v: Crystal structure of AlbEF homolog mutant (AlbF-H54A/H58A) from Quasibacillus thermotolerans
Classification: HYDROLASE
Source organism: Quasibacillus thermotolerans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-24
Authors: Ishida, K., Nakamura, A., Kojima, S.
PDB entry 7y8w: Crystal structure of DLC-1/SAO-1 complex
Classification: PROTEIN BINDING
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-06-24
Authors: Yan, H., Zhao, C., Wei, Z., Yu, C.
PDB entry 7y8x: Crystal structure of AlbEF homolog from Quasibacillus thermotolerans in complex with Ni(II)
Classification: HYDROLASE
Source organism: Quasibacillus thermotolerans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-06-24
Authors: Ishida, K., Nakamura, A., Kojima, S.
PDB entry 7y8y: Structure of Cas7-11-crRNA-tgRNA in complex with TPR-CHAT
Classification: IMMUNE SYSTEM/RNA
Source organism: Candidatus Scalindua brodae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-06-24
Authors: Wang, S., Guo, M., Zhu, Y., Huang, Z.
PDB entry 7y8z: CcpS
Classification: GENE REGULATION
Source organism: Streptococcus suis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-24
Authors: Tang, J.S., Ran, T.T., Wang, W.W., Fan, H.J.
PDB entry 7y90: Crystal Structure Analysis of cp1 bound BCL2
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-06-24
Authors: Li, F.W.
PDB entry 7y94: Crystal structure of Escherichia coli Adenine Phosphoribosyltransferase (APRT) in complex with Adenine
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-24
Authors: Yadav, P., Kushwaha, G.S., Bhavesh, N.S.
PDB entry 7y95: Crystal structure of sDscam Ig1 domain, isoform beta6v2
Classification: CELL ADHESION
Source organism: Chelicerata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-06-24
Authors: Chen, Q., Yu, Y., Cheng, J.
PDB entry 7y96: Crystal structure of the carboxy-terminal domain of a coronavirus M protein fused with a split GFP
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Pipistrellus bat coronavirus HKU5
Experimental method: X-RAY DIFFRACTION
Resolution: 3.415 Å
Deposited: 2022-06-24
Authors: Wang, X., Sun, Z., Zhou, X.
PDB entry 7y97: Crystal structure of CYP109B4 from Bacillus Sonorensis
Classification: OXIDOREDUCTASE
Source organism: Bacillus sonorensis L12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2022-06-24
Authors: Shen, P.P., Huang, J.-W., Li, X., Liu, W.D., Chen, C.-C., Guo, R.-T.