LiteFold/PDB huggingface dataset:
PDB entry 7phd: Chimeric carminomycin-4-O-methyltransferase (DnrK) with a region from 10-decarboxylase TamK
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces peucetius; Streptomyces tsukubensis (strain DSM 42081 / NBRC 108919 / NRRL 18488 / 9993)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2021-08-17
Authors: Grocholski, T., Dinis, P., MetsaKetela, M.
PDB entry 7phe: Chimeric carminomycin-4-O-methyltransferase (DnrK) with regions from 10-hydroxylase RdmB and 10-decarboxylase TamK
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces peucetius; Streptomyces purpurascens; Streptomyces tsukubensis (strain DSM 42081 / NBRC 108919 / NRRL 18488 / 9993)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2021-08-17
Authors: Dinis, P., MetsaKetela, M.
PDB entry 7phf: Chimeric carminomycin-4-O-methyltransferase (DnrK) with regions from 10-hydroxylase RdmB and 10-decarboxylase TamK
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces peucetius; Streptomyces purpurascens; Streptomyces tsukubensis (strain DSM 42081 / NBRC 108919 / NRRL 18488 / 9993)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2021-08-17
Authors: Dinis, P., MetsaKetela, M.
PDB entry 7phg: MaP OF P5C3RBD Interface
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-08-17
Authors: Perez, L.
PDB entry 7phh: Human voltage-gated potassium channel Kv3.1 (apo condition)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-17
Authors: Chi, G., Venkaya, S., Singh, N.K., McKinley, G., Mukhopadhyay, S.M.M., Marsden, B., MacLean, E.M., Fernandez-Cid, A., Pike, A.C.W., Savva, C., Ragan, T.J., Burgess-Brown, N.A., Duerr, K.L.
PDB entry 7phi: Human voltage-gated potassium channel Kv3.1 (with Zn)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-17
Authors: Chi, G., Qian, P., Castro-Hartmann, P., Venkaya, S., Singh, N.K., McKinley, G., Mukhopadhyay, S.M.M., Fernandez-Cid, A., Marsden, B., MacLean, E.M., Pike, A.C.W., Sader, K., Burgess-Brown, N.A., Duerr, K.L.
PDB entry 7phj: LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
Classification: HYDROLASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-08-17
Authors: Ryan, M.D., Pallin, T.D., Lamers, M.B.A.C., Leonard, P.M.
PDB entry 7phk: Human voltage-gated potassium channel Kv3.1 in dimeric state (with Zn)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-17
Authors: Chi, G., Qian, P., Castro-Hartmann, P., Venkaya, S., Singh, N.K., McKinley, G., Mukhopadhyay, S.M.M., Marsden, B., MacLean, E.M., Fernandez-Cid, A., Pike, A.C.W., Sader, K., Burgess-Brown, N.A., Duerr, K.L.
PDB entry 7phl: Human voltage-gated potassium channel Kv3.1 (with EDTA)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-17
Authors: Chi, G., Qian, P., Castro-Hartmann, P., Venkaya, S., Singh, N.K., McKinley, G., Mukhopadhyay, S.M.M., Fernandez-Cid, A., Pike, A.C.W., Marsden, B., MacLean, E.M., Sader, K., Burgess-Brown, N.A., Duerr, K.L.
PDB entry 7phm: Cryo-EM structure of Mycobacterium tuberculosis encapsulin
Classification: STRUCTURAL PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2021-08-17
Authors: Woodward, J.D.
PDB entry 7phn: LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-17
Authors: Ryan, M.D., Pallin, T.D., Lamers, M.B.A.C., Leonard, P.M.
PDB entry 7pho: Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.1 in complex with 4-hydroxybenzaldehyde
Classification: TRANSFERASE
Source organism: Mycolicibacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2021-08-17
Authors: Nunes-Costa, D., Silva, A., Barbosa Pereira, P.J., Macedo-Ribeiro, S.
PDB entry 7php: Structure of Multidrug and Toxin Compound Extrusion (MATE) transporter NorM by NabFab-fiducial assisted cryo-EM
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; synthetic construct; Vibrio cholerae RC385
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2021-08-18
Authors: Bloch, J.S., Mukherjee, S., Kowal, J., Niederer, M., Pardon, E., Steyaert, J., Kossiakoff, A.A., Locher, K.P.
PDB entry 7phq: Structure of homo-dimeric Staphylococcus capitis divalent metal ion transporter (DMT) by NabFab-fiducial assisted cryo-EM
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Staphylococcus capitis; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.45 Å
Deposited: 2021-08-18
Authors: Bloch, J.S., Mukherjee, S., Kowal, J., Kossiakoff, A.A., Locher, K.P.
PDB entry 7phr: Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I
Classification: IMMUNE SYSTEM
Source organism: Aequorea victoria; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2021-08-18
Authors: Susac, L., Thomas, C., Tampe, R.
PDB entry 7phs: highly potent IL6 antagonistic antibody selected from a camelid immune phage display repertoire
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2021-08-18
Authors: Cambillau, C., Pannecoucke, E., De Haard, H.
PDB entry 7pht: Structure of Insulin receptor's transmembrane domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-08-18
Authors: Bershatsky, Y.V., Nadezhdin, K.D., Bocharova, O.V., Bocharov, E.V.
PDB entry 7phu: PfRH5 bound to monoclonal antibody R5.015 and R5.016 Fab fragments
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2021-08-18
Authors: Ragotte, R.J., Higgins, M.K.
PDB entry 7phv: PfCyRPA bound to monoclonal antibody Cy.007 Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 3.091 Å
Deposited: 2021-08-18
Authors: Ragotte, R.J., Higgins, M.K.
PDB entry 7phw: PfCyRPA bound to monoclonal antibody Cy.004 Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.793 Å
Deposited: 2021-08-18
Authors: Ragotte, R.J., Higgins, M.K.
PDB entry 7phx: Tsetse thrombin inhibitor in complex with human alpha-thrombin - acid-stable sulfotyrosine analogue
Classification: BLOOD CLOTTING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-18
Authors: Pereira, P.J.B., Ripoll-Rozada, J., Calisto, B.M.
PDB entry 7phy: Vaccinia virus E2
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus WR
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-08-19
Authors: Gao, W.N.D., Gao, C., Graham, S.C.
PDB entry 7phz: Crystal structure of X77 bound to the main protease (3CLpro/Mpro) of SARS-CoV-2 in spacegroup P2(1)2(1)2(1).
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2021-08-19
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 7pi0: Unstacked compact Dunaliella PSII
Classification: PHOTOSYNTHESIS
Source organism: Dunaliella salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2021-08-19
Authors: Caspy, I., Fadeeva, M., Mazor, Y., Nelson, N.
PDB entry 7pi1: Bacillus subtilis PabB
Classification: TRANSFERASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.729 Å
Deposited: 2021-08-19
Authors: Rooms, L.D., Race, P.R.
PDB entry 7pi2: PfCyRPA bound to monoclonal antibody Cy.003 Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2021-08-19
Authors: Ragotte, R.J., Higgins, M.K.
PDB entry 7pi3: PfCyRPA bound to Fab fragments from monoclonal antibodies Cy.003, Cy.004 and Cy.007
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 3.269 Å
Deposited: 2021-08-19
Authors: Ragotte, R.J., Higgins, M.K.
PDB entry 7pi4: FAK Protac GSK215 in complex with FAK and pVHL:ElonginC:ElonginB
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2021-08-19
Authors: Chung, C.
PDB entry 7pi5: Unstacked stretched Dunaliella PSII
Classification: PHOTOSYNTHESIS
Source organism: Dunaliella salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2021-08-19
Authors: Caspy, I., Fadeeva, M., Mazor, Y., Nelson, N.
PDB entry 7pi6: Trypanosoma brucei ISG65 bound to human complement C3d
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-08-19
Authors: Cook, A.D., Higgins, M.K.
PDB entry 7pi7: PfCyRPA bound to monoclonal antibody Cy.002 Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2021-08-19
Authors: Ragotte, R.J., Higgins, M.K.
PDB entry 7pi8: 70S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.9 Å
Deposited: 2021-08-19
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pi9: 70S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2021-08-19
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pia: 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 13.6 Å
Deposited: 2021-08-19
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pib: 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2021-08-19
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pic: 70S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae (strain ATCC 29342 / M129); Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.1 Å
Deposited: 2021-08-19
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pid: Protein kinase A catalytic subunit in complex with PKI5-24 and EN060
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.496 Å
Deposited: 2021-08-19
Authors: Glinca, S., Mueller, J.M., Ruf, M., Merkl, S.
PDB entry 7pie: Protein kinase A catalytic subunit in complex with PKI5-24 and EN068
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.427 Å
Deposited: 2021-08-19
Authors: Glinca, S., Mueller, J.M., Ruf, M., Merkl, S.
PDB entry 7pif: Protein kinase A catalytic subunit in complex with PKI5-24 and EN086
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.395 Å
Deposited: 2021-08-19
Authors: Glinca, S., Mueller, J.M., Ruf, M., Merkl, S.
PDB entry 7pig: Protein kinase A catalytic subunit in complex with PKI5-24 and EN088
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.553 Å
Deposited: 2021-08-19
Authors: Glinca, S., Mueller, J.M., Ruf, M., Merkl, S.
PDB entry 7pih: Protein kinase A catalytic subunit in complex with PKI5-24 and EN093
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.374 Å
Deposited: 2021-08-19
Authors: Glinca, S., Mueller, J.M., Ruf, M., Merkl, S.
PDB entry 7pii: Structure of the human CCAN CENP-A alpha-satellite complex
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2021-08-19
Authors: Yatskevich, S., Muir, K.W., Bellini, D., Barford, D.
PDB entry 7pij: Structure of Staphylococcus capitis divalent metal ion transporter (DMT) by NabFab-fiducial assisted cryo-EM
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Staphylococcus capitis; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2021-08-20
Authors: Bloch, J.S., Mukherjee, S., Kowal, J., Kossiakoff, A.A., Locher, K.P.
PDB entry 7pik: Cryo-EM structure of E. coli TnsB in complex with right end fragment of Tn7 transposon
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2021-08-20
Authors: Kaczmarska, Z., Czarnocki-Cieciura, M., Rawski, M., Nowotny, M.
PDB entry 7pil: Cryo-EM structure of the Rhodobacter sphaeroides RC-LH1-PufXY monomer complex at 2.5 A
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158); Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-08-20
Authors: Qian, P., Hunter, C.N.
PDB entry 7pim: Partial structure of tyrosine hydroxylase lacking the first 35 residues in complex with dopamine.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2021-08-20
Authors: Bueno-Carrasco, M.T., Cuellar, J., Santiago, C., Valpuesta, J.M., Martinez, A., Flydal, M.I.
PDB entry 7pin: Stacked compact Dunaliella PSII
Classification: PHOTOSYNTHESIS
Source organism: Dunaliella salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-08-22
Authors: Caspy, I., Fadeeva, M., Mazor, Y., Nelson, N.
PDB entry 7pio: 70S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.5 Å
Deposited: 2021-08-23
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pip: 70S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2021-08-23
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7piq: 70S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.7 Å
Deposited: 2021-08-23
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pir: 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 12.1 Å
Deposited: 2021-08-23
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pis: 70S ribosome with EF-G, A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 15 Å
Deposited: 2021-08-23
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7pit: 70S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
Classification: TRANSLATION
Source organism: Mycoplasma pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.7 Å
Deposited: 2021-08-23
Authors: Xue, L., Lenz, S., Rappsilber, J., Mahamid, J.
PDB entry 7piu: Cryo-EM structure of the agonist setmelanotide bound to the active melanocortin-4 receptor (MC4R) in complex with the heterotrimeric Gs protein at 2.6 A resolution.
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Lama glama; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2021-08-23
Authors: Heyder, N.A., Schmidt, A., Kleinau, G., Hilal, T., Scheerer, P.
PDB entry 7piv: Active Melanocortin-4 receptor (MC4R)- Gs protein complex bound to agonist NDP-alpha-MSH at 2.86 A resolution.
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2021-08-23
Authors: Heyder, N.A., Schmidt, A., Kleinau, G., Hilal, T., Scheerer, P.
PDB entry 7piw: Stacked stretched Dunaliella PSII
Classification: PHOTOSYNTHESIS
Source organism: Dunaliella salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-08-23
Authors: Caspy, I., Fadeeva, M., Mazor, Y., Nelson, N.
PDB entry 7piz: The structure of phosphoglucomutase from Candida albicans
Classification: ISOMERASE
Source organism: Candida albicans P75010
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-08-23
Authors: Yan, K., van Aalten, D.M.F.
PDB entry 7pj1: Solution structure of isolated Drosophila histone H2A-H2B heterodimer
Classification: DNA BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: SOLUTION NMR
Deposited: 2021-08-23
Authors: van Ingen, H., Zhang, H.
PDB entry 7pj2: LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-23
Authors: Ryan, M.D., Pallin, T.D., Lamers, M.B.A.C., Leonard, P.M.
PDB entry 7pj3: Crystal structure of catalytic domain in open conformation of LytB from Streptococcus pneumoniae
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2021-08-23
Authors: Martinez Caballero, S., Hermoso, J.A.
PDB entry 7pj4: Crystal structure of catalytic domain in closed conformation of LytB (E585Q)from Streptococcus pneumoniae
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-08-23
Authors: Martinez Caballero, S., Hermoso, J.A.
PDB entry 7pj5: Crystal structure of catalytic domain of LytB from Streptococcus pneumoniae in complex with NAG-NAG-NAG-NAG tetrasaccharide
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-08-23
Authors: Martinez Caballero, S., Hermoso, J.A.
PDB entry 7pj6: Crystal structure of catalytic domain of LytB (E585Q) from Streptococcus pneumoniae in complex with NAG-NAM-NAG-NAM-NAG peptidolycan analogue
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-08-23
Authors: Martinez Caballero, S., Hermoso, J.A.
PDB entry 7pj7: Crystal structure of YTHDC1 with compound DHU_DC1_222
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2021-08-23
Authors: Bedi, R.K., Huang, D., Caflisch, A.
PDB entry 7pj8: Crystal structure of YTHDC1 with compound DHU_DC1_225
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-08-23
Authors: Bedi, R.K., Huang, D., Caflisch, A.
PDB entry 7pj9: Crystal structure of YTHDC1 with compound DHU_DC1_232
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2021-08-23
Authors: Bedi, R.K., Huang, D., Caflisch, A.
PDB entry 7pja: Crystal structure of YTHDC1 with compound PSI_DC1_002
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-23
Authors: Bedi, R.K., Huang, D., Caflisch, A.
PDB entry 7pjb: Crystal structure of YTHDC1 with compound PSI_DC1_004
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-23
Authors: Bedi, R.K., Huang, D., Caflisch, A.
PDB entry 7pjc: The structure of Candida albicans phosphoglucomutase with isothiazolone modification on Cys359
Classification: ISOMERASE
Source organism: Candida albicans SC5314
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2021-08-23
Authors: Yan, K., van Aalten, D.M.F.
PDB entry 7pjd: The X-ray structure of juvenile hormone diol kinase from the silk worm Bombyx mori.
Classification: METAL BINDING PROTEIN
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-08-23
Authors: Guo, J., Cooper, J., Keegan, R.M.
PDB entry 7pje: Inhibiting parasite proliferation using a rationally designed anti-tubulin agent
Classification: STRUCTURAL PROTEIN
Source organism: synthetic construct; Tetrahymena thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-08-24
Authors: Sharma, A., Gaillard, N., Ehrhard, V.A., Steinmetz, M.O.
PDB entry 7pjf: Inhibiting parasite proliferation using a rationally designed anti-tubulin agent
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.862 Å
Deposited: 2021-08-24
Authors: Sharma, A., Gaillard, N., Ehrhard, V.A., Steinmetz, M.O.
PDB entry 7pjg: LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2021-08-24
Authors: Ryan, M.D., Pallin, T.D., Lamers, M.B.A.C., Leonard, P.M.
PDB entry 7pjh: Crystal structure of the human spliceosomal maturation factor AAR2 bound to the RNAse H domain of PRPF8
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-08-24
Authors: Preussner, M., Santos, K., Heroven, A.C., Alles, J., Heyd, F., Wahl, M.C., Weber, G.
PDB entry 7pji: Crystal structure of Pseudomonas aeruginosa guaB (IMP dehydrogenase) bound to ATP and GDP at 1.65A resolution
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-08-24
Authors: Fernandez-Justel, D., Buey, R.M.
PDB entry 7pjj: Structure of the Family-3 Glycosyl Hydrolase BcpE2 from Streptomyces scabies
Classification: HYDROLASE
Source organism: Streptomyces scabiei (strain 87.22)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.086 Å
Deposited: 2021-08-24
Authors: Jadot, C., Herman, R., Deflandre, B., Rigali, S., Kerff, F.
PDB entry 7pjk: Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with a benzotriazole analog of thalidomide
Classification: SIGNALING PROTEIN
Source organism: Magnetospirillum gryphiswaldense MSR-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-08-24
Authors: Heim, C., Hartmann, M.D., Maiwald, S.
PDB entry 7pjm: Crystal Structure of Ivosidenib-resistant IDH1 variant R132C S280F in complex with NADPH and Ca2+/2-Oxoglutarate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-24
Authors: Reinbold, R., Rabe, P., Abboud, M.I., Schofield, C.J.
PDB entry 7pjn: Crystal Structure of Ivosidenib-resistant IDH1 variant R132C S280F in complex with NADPH and inhibitor DS-1001B
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-08-24
Authors: Reinbold, R., Rabe, P., Abboud, M.I., Schofield, C.J., Clifton, I.J.
PDB entry 7pjo: Crystal form 3 of CPR-C4: a cysteine protease from the Candidate Phyla Radiation
Classification: HYDROLASE
Source organism: Candidate division CPR1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.248 Å
Deposited: 2021-08-24
Authors: Cornish, K.A.S., Pohl, E.
PDB entry 7pjp: Crystal structure of YTHDC1 with compound DHU_DC1_226
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2021-08-24
Authors: Bedi, R.K., Huang, D., Caflisch, A.
PDB entry 7pjq: Crystal structure of YTHDC1 with compound T96
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2021-08-24
Authors: Bedi, R.K., Huang, D., Caflisch, A.
PDB entry 7pjr: Notum_ARUK3000438
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2021-08-24
Authors: Vecchia, L., Zhao, Y., Fish, P., Jones, E.Y.
PDB entry 7pjs: Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2021-08-24
Authors: Petrychenko, V., Peng, B.Z., Schwarzer, A.C., Peske, F., Rodnina, M.V., Fischer, N.
PDB entry 7pjt: Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2021-08-24
Authors: Petrychenko, V., Peng, B.Z., Schwarzer, A.C., Peske, F., Rodnina, M.V., Fischer, N.
PDB entry 7pju: Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.5 Å
Deposited: 2021-08-24
Authors: Petrychenko, V., Peng, B.Z., Schwarzer, A.C., Peske, F., Rodnina, M.V., Fischer, N.
PDB entry 7pjv: Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-24
Authors: Petrychenko, V., Peng, B.Z., Schwarzer, A.C., Peske, F., Rodnina, M.V., Fischer, N.
PDB entry 7pjw: Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-08-24
Authors: Petrychenko, V., Peng, B.Z., Schwarzer, A.C., Peske, F., Rodnina, M.V., Fischer, N.
PDB entry 7pjx: Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2021-08-24
Authors: Petrychenko, V., Peng, B.Z., Schwarzer, A.C., Peske, F., Rodnina, M.V., Fischer, N.
PDB entry 7pjy: Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-24
Authors: Petrychenko, V., Peng, B.Z., Schwarzer, A.C., Peske, F., Rodnina, M.V., Fischer, N.
PDB entry 7pjz: Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2021-08-24
Authors: Petrychenko, V., Peng, B.Z., Schwarzer, A.C., Peske, F., Rodnina, M.V., Fischer, N.
PDB entry 7pk0: Bovine Glycine N-Acyltransferase complexed with Benzoyl-CoA
Classification: TRANSFERASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-08-25
Authors: Opperman, D.J., Ebrecht, A.C., Read, R.J.
PDB entry 7pk1: Bovine Glycine N-Acyltransferase
Classification: TRANSFERASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-08-25
Authors: Opperman, D.J., Ebrecht, A.C., Read, R.J.
PDB entry 7pk2: Bovine Glycine N-Acyltransferase
Classification: TRANSFERASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-08-25
Authors: Opperman, D.J., Ebrecht, A.C., Read, R.J.
PDB entry 7pk3: Notum_ARUK3001185
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2021-08-25
Authors: Vecchia, L., Hillier, J., Zhao, Y., Fish, P., Jones, E.Y.
PDB entry 7pk4: Tick salivary cystatin Ricistatin in complex with cathepsin V
Classification: HYDROLASE
Source organism: Homo sapiens; Ixodes ricinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-08-25
Authors: Busa, M., Mares, M.
PDB entry 7pk5: Phosphodiesterase PdeL (EAL domain of crystals comprising full-length protein)
Classification: HYDROLASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.4 Å
Deposited: 2021-08-25
Authors: Fadel, J., Schirmer, T.
PDB entry 7pk6: Providencia stuartii Arginine decarboxylase (Adc), stack structure
Classification: LYASE
Source organism: Providencia stuartii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.15 Å
Deposited: 2021-08-25
Authors: Jessop, M., Desfosses, A., Bacia-Verloop, M., Gutsche, I.
PDB entry 7pk8: LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-08-25
Authors: Ryan, M.D., Pallin, T.D., Lamers, M.B.A.C., Leonard, P.M.
PDB entry 7pk9: C-reactive protein decamer at pH 7.5
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-08-25
Authors: Noone, D.P., Sharp, T.H.
PDB entry 7pka: Synechocystis sp. PCC6803 glutathione transferase Chi 1, GSOH bound
Classification: TRANSFERASE
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2021-08-25
Authors: Didierjean, C., Mocchetti, E., Hecker, A., Favier, F.
PDB entry 7pkb: C-reactive protein pentamer at pH 7.5
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-25
Authors: Noone, D.P., Sharp, T.H.
PDB entry 7pkc: Streptococcus pyogenes Apo-GapN C284S variant
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pyogenes M49 591
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-08-25
Authors: Schindelin, H., Albert, L.
PDB entry 7pkd: C-reactive protein decamer at pH 7.5 with phosphocholine ligand
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-25
Authors: Noone, D.P., Sharp, T.H.
PDB entry 7pke: C-reactive protein pentamer at pH 7.5 with phosphocholine ligand
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-25
Authors: Noone, D.P., Sharp, T.H.
PDB entry 7pkf: C-reactive protein decamer at pH 5
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-08-25
Authors: Noone, D.P., Sharp, T.H.
PDB entry 7pkg: C-reactive protein pentamer at pH 5
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-25
Authors: Noone, D.P., Sharp, T.H.
PDB entry 7pkh: C-reactive protein decamer at pH 5 with phosphocholine ligand
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-25
Authors: Noone, D.P., Sharp, T.H.
PDB entry 7pki: Crystal structure of human ACE2 bound to the spike receptor-binding domain from a cave bat sarbecovirus closely related to SARS-CoV-2.
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Sarbecovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94234 Å
Deposited: 2021-08-25
Authors: Baquero, E., Rey, F.A.
PDB entry 7pkj: Streptococcus pyogenes apo GapN
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pyogenes M49 591
Experimental method: X-RAY DIFFRACTION
Resolution: 1.989 Å
Deposited: 2021-08-25
Authors: Schindelin, H., Albert, L.
PDB entry 7pkk: LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-08-25
Authors: Ryan, M.D., Pallin, T.D., Lamers, M.B.A.C., Leonard, P.M.
PDB entry 7pkl: Mechanistic understanding of antibody masking with anti-idiotypic antibody fragments
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-08-25
Authors: Hargreaves, D.
PDB entry 7pkm: LpxC Inhibitors With Fluoroproline As A Novel Zinc-Binding Group Can Serve As A Novel Class of Antibiotic With Activity Against Multidrug-Resistant Gram-Negative Bacteria
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-25
Authors: Ryan, M.D., Pallin, T.D., Lamers, M.B.A.C., Leonard, P.M.
PDB entry 7pkn: Structure of the human CCAN deltaCT complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-25
Authors: Muir, K.W., Yatskevich, S., Bellini, D., Barford, D.
PDB entry 7pko: CryoEM structure of Rotavirus NSP2
Classification: VIRAL PROTEIN
Source organism: Rotavirus A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-08-26
Authors: Bravo, J.P.K., Borodavka, A.
PDB entry 7pkp: NSP2 RNP complex
Classification: VIRAL PROTEIN
Source organism: Rotavirus A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-26
Authors: Bravo, J.P.K., Borodavka, A.
PDB entry 7pkq: Small subunit of the Chlamydomonas reinhardtii mitoribosome
Classification: RIBOSOME
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2021-08-26
Authors: Waltz, F., Soufari, H., Hashem, Y.
PDB entry 7pkr: Vault structure in primmed conformation
Classification: STRUCTURAL PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-08-26
Authors: Guerra, P., Gonzalez-Alamos, M., Llauro, A., Casanas, A., Querol-Audi, J., de Pablo, P., Verdaguer, N.
PDB entry 7pks: Structural basis of Integrator-mediated transcription regulation
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Human immunodeficiency virus 1; Sus scrofa domesticus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-08-26
Authors: Fianu, I., Chen, Y., Dienemann, C., Cramer, P.
PDB entry 7pkt: Large subunit of the Chlamydomonas reinhardtii mitoribosome
Classification: RIBOSOME
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-26
Authors: Waltz, F., Soufari, H., Hashem, Y.
PDB entry 7pku: Structure of SARS-CoV-2 nucleoprotein in dynamic complex with its viral partner nsp3a
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: SOLUTION NMR
Deposited: 2021-08-26
Authors: Bessa, L.M., Guseva, S., Camacho-Zarco, A.R., Salvi, N., Blackledge, M.
PDB entry 7pkv: Notum_Inhibitor ARUK3000223
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2021-08-26
Authors: Ruza, R., Zhao, Y., Fish, P., Jones, E.Y.
PDB entry 7pkw: Crystal structure of VIRB8-like OrfG central and C-terminal domains of Streptococcus thermophilus ICESt3 (Gram positive conjugative type IV secretion system).
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.835 Å
Deposited: 2021-08-27
Authors: Favier, F., Didierjean, C., Cappele, J., Douzi, B., Leblond-Bourget, N.
PDB entry 7pkx: Crystal structure of a DyP-type peroxidase from Bacillus subtilis in P3121 space group
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.491 Å
Deposited: 2021-08-27
Authors: Borges, P.T., Rodrigues, C., Silva, D., Taborda, A., Brissos, V., Frazao, C., Martins, L.O.
PDB entry 7pky: Half-vault structure
Classification: STRUCTURAL PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.9 Å
Deposited: 2021-08-27
Authors: Guerra, P., Gonzalez-Alamos, M., Llauro, A., Casanas, A., Querol-Audi, J., de Pablo, P., Verdaguer, N.
PDB entry 7pkz: Vault structure in committed conformation
Classification: STRUCTURAL PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.8 Å
Deposited: 2021-08-27
Authors: Guerra, P., Gonzalez-Alamos, M., Llauro, A., Casanas, A., Querol-Audi, J., de Pablo, P., Verdaguer, N.
PDB entry 7pl0: Crystal structure of a DyP-type peroxidase 5G5 variant from Bacillus subtilis
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-27
Authors: Borges, P.T., Rodrigues, C., Silva, D., Taborda, A., Brissos, V., Frazao, C., Martins, L.O.
PDB entry 7pl1: Crystal structure of human METTL1 bound to Sinefungin
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-27
Authors: Nai, F., Caflisch, A.
PDB entry 7pl2: Crystal structure of choline-binding module of LytB from Streptococcus pneumoniae
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2021-08-28
Authors: Martinez Caballero, S., Hermoso, J.A.
PDB entry 7pl3: Crystal structure of catalytic domain in closed conformation of LytB from Streptococcus pneumoniae
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae R6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-28
Authors: Martinez Caballero, S., Hermoso, J.A.
PDB entry 7pl4: Structure of Insulin receptor-related receptor's transmembrane domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-08-28
Authors: Bershatsky, Y.V., Nadezhdin, K.D., Bocharova, O.V., Bocharov, E.V.
PDB entry 7pl5: Crystal structure of choline-binding module (R1-R9) of LytB from Streptococcus pneumoniae
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-08-28
Authors: Molina, R., Martinez Caballero, S., Hermoso, J.A.
PDB entry 7pl7: Crystal structure of yeast Otu2 OTU domain
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-08-28
Authors: Ivic, N., Cheng, J., Becker, T., Ikeuchi, K.
PDB entry 7pl9: Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex
Classification: MEMBRANE PROTEIN
Source organism: Phaeocystis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2021-08-29
Authors: Matzov, D., Kaczmarczyk, I., Shalev-Benami, M.
PDB entry 7pla: Cryo-EM structure of ShCas12k in complex with a sgRNA and a dsDNA target
Classification: DNA BINDING PROTEIN
Source organism: Scytonema hofmannii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2021-08-30
Authors: Schmitz, M., Jinek, M.
PDB entry 7plb: Caulobacter crescentus xylonolactonase with D-xylose
Classification: HYDROLASE
Source organism: Caulobacter vibrioides (strain ATCC 19089 / CB15)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2021-08-30
Authors: Paakkonen, J., Hakulinen, N., Rouvinen, J.
PDB entry 7plc: Caulobacter crescentus xylonolactonase with D-xylose, P21 space group
Classification: HYDROLASE
Source organism: Caulobacter vibrioides (strain ATCC 19089 / CB15)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-08-30
Authors: Paakkonen, J., Hakulinen, N., Rouvinen, J.
PDB entry 7pld: Caulobacter crescentus xylonolactonase with (R)-4-hydroxy-2-pyrrolidone
Classification: HYDROLASE
Source organism: Caulobacter vibrioides (strain ATCC 19089 / CB15)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-08-30
Authors: Paakkonen, J., Hakulinen, N., Rouvinen, J.
PDB entry 7ple: ArsH of Paracoccus denitrificans
Classification: OXIDOREDUCTASE
Source organism: Paracoccus denitrificans (strain Pd 1222)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-08-30
Authors: Kryl, M.
PDB entry 7plf: Human Carbonic Anhydrase I in complex with clorsulon
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.461 Å
Deposited: 2021-08-31
Authors: Angeli, A., Ferraroni, M.
PDB entry 7plh: Scytonema hofmannii TnsC bound to AMPPNP and DNA
Classification: DNA BINDING PROTEIN
Source organism: Scytonema hofmannii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2021-08-31
Authors: Querques, I., Jinek, M.
PDB entry 7pli: DEAD-box helicase DbpA bound to single stranded RNA and ADP/BeF3
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-31
Authors: Wurm, J.P.
PDB entry 7plj: Structure of Polyphosphate kinase 2 from Deinococcus radiodurans, in complex with ATP and polyphosphates.
Classification: TRANSFERASE
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2021-08-31
Authors: Silva, S.T.N., Romao, C.V.
PDB entry 7plk: Crystal structure bovine Hsc70(aa1-554)E213A/D214A in complex with nicotinic-acid-derivative
Classification: CHAPERONE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48781 Å
Deposited: 2021-08-31
Authors: Zehe, M., Grimm, C., Sotriffer, C.
PDB entry 7pll: Structure of the murine cortactin C-SH3 domain in complex with a Pyk2 proline-rich ligand
Classification: CELL INVASION
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2021-08-31
Authors: Sokolik, C.G., Samson, A.O., Gil-Henn, H., Chill, J.H.
PDB entry 7plm: CryoEM reconstruction of pyruvate ferredoxin oxidoreductase (PFOR) in anaerobic conditions
Classification: OXIDOREDUCTASE
Source organism: Desulfocurvibacter africanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-08-31
Authors: Cherrier, M.V., Vernede, X., Fenel, D., Martin, L., Arragain, B., Neumann, E., Fontecilla Camps, J.C., Schoehn, G., Nicolet, Y.
PDB entry 7pln: Structure of the APCbeta domain of Plasmodium vivax perforin-like protein 1
Classification: CELL INVASION
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2021-08-31
Authors: Williams, S.I., Ni, T., Yu, X., Gilbert, R.J.C.
PDB entry 7plo: H. sapiens replisome-CUL2/LRR1 complex
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-09-01
Authors: Jones, M.J., Yeeles, J.T.P., Deegan, T.D., Jenkyn-Bedford, M.
PDB entry 7plp: Human Teneurin-4 C-rich domain
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-09-01
Authors: Beugelink, J.W., Meijer, D.H., Janssen, B.J.C.
PDB entry 7plq: Crystal structure of the PARP domain of wheat SRO1
Classification: PLANT PROTEIN
Source organism: Triticum aestivum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2021-09-01
Authors: Wirthmueller, L., Loll, B.
PDB entry 7plr: Crystal structure of the N-terminal endonuclease domain of La Crosse virus L-protein bound to compound Baloxavir
Classification: TRANSFERASE
Source organism: Bunyavirus La Crosse
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2021-09-01
Authors: Feracci, M., Hernandez, S., Vincentelli, R., Ferron, F., Reguera, J., Canard, B., Alvarez, K.
PDB entry 7pls: Cryo-EM structures of human fucosidase FucA1 reveal insight into substate recognition and catalysis.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2021-09-01
Authors: Armstrong, Z., Meek, R.W., Wu, L., Blaza, J.N., Davies, G.J.
PDB entry 7plt: Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er)
Classification: MOTOR PROTEIN
Source organism: Gallus gallus; Homo sapiens; Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-09-01
Authors: Pospich, S., Sweeney, H.L., Houdusse, A., Raunser, S.
PDB entry 7plu: Cryo-EM structure of the actomyosin-V complex in the rigor state (central 3er/2er)
Classification: MOTOR PROTEIN
Source organism: Gallus gallus; Homo sapiens; Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-09-01
Authors: Pospich, S., Sweeney, H.L., Houdusse, A., Raunser, S.