LiteFold/PDB huggingface dataset:
PDB entry 2zh6: Complex structure of AFCCA with tRNAminiDCU and ATP
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zh7: Complex structure of AFCCA with tRNAminiDG
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zh8: Complex structure of AFCCA with tRNAminiDGC
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zh9: Complex structure of AFCCA with tRNAminiDU
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zha: Complex structure of AFCCA with tRNAminiDU and CTP
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zhb: Complex structure of AFCCA with tRNAminiDUC
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zhc: ParM filament
Classification: CELL CYCLE/PROTEIN FIBRIL
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 23 Å
Deposited: 2008-02-04
Authors: Popp, D., Narita, A., Oda, T., Fujisawa, T., Matsuo, H., Nitanai, Y., Iwasa, M., Maeda, K., Onishi, H., Maeda, Y.
PDB entry 2zhd: Exploring trypsin S3 pocket
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2008-02-04
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zhe: Exploring thrombin S3 pocket
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-02-04
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zhf: Exploring thrombin S3 pocket
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2008-02-04
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zhg: Crystal structure of SoxR in complex with DNA
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-02-05
Authors: Watanabe, S., Kita, A., Kobayashi, K., Miki, K.
PDB entry 2zhh: Crystal structure of SoxR
Classification: TRANSCRIPTION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-02-05
Authors: Watanabe, S., Kita, A., Kobayashi, K., Miki, K.
PDB entry 2zhi: Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.58 A resolution
Classification: METAL BINDING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2008-02-06
Authors: Butsushita, K., Ida, K., Fukuoka, S.-I., Arii, Y.
PDB entry 2zhj: Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A resolution
Classification: METAL BINDING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2008-02-06
Authors: Butsushita, K., Ida, K., Fukuoka, S.-I., Arii, Y.
PDB entry 2zhk: Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine dimer (crystal 1)
Classification: SUGAR BINDING PROTEIN
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-02-06
Authors: Nagae, M., Nishi, N., Murata, T., Usui, T., Nakamura, T., Wakatsuki, S., Kato, R.
PDB entry 2zhl: Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine dimer (crystal 2)
Classification: SUGAR BINDING PROTEIN
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-02-06
Authors: Nagae, M., Nishi, N., Murata, T., Usui, T., Nakamura, T., Wakatsuki, S., Kato, R.
PDB entry 2zhm: Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine trimer (crystal 1)
Classification: SUGAR BINDING PROTEIN
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2008-02-06
Authors: Nagae, M., Nishi, N., Murata, T., Usui, T., Nakamura, T., Wakatsuki, S., Kato, R.
PDB entry 2zhn: Crystal structure of human galectin-9 N-terminal CRD in complex with N-acetyllactosamine trimer (crystal 2)
Classification: SUGAR BINDING PROTEIN
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-02-06
Authors: Nagae, M., Nishi, N., Murata, T., Usui, T., Nakamura, T., Wakatsuki, S., Kato, R.
PDB entry 2zho: Crystal structure of the regulatory subunit of aspartate kinase from Thermus thermophilus (ligand free form)
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2008-02-06
Authors: Yoshida, A., Tomita, T., Kuzuyama, T., Nishiyama, M.
PDB entry 2zhp: Crystal structure of bleomycin-binding protein from Streptoalloteichus hindustanus complexed with bleomycin derivative
Classification: ANTIBIOTIC INHIBITOR
Source organism: Streptoalloteichus hindustanus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-02-06
Authors: Okumura, H., Miyazaki, I., Simizu, S., Osada, H.
PDB entry 2zhq: Thrombin Inhibition
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2008-02-08
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zhr: Crystal structure of BACE1 in complex with OM99-2 at pH 5.0
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-02-08
Authors: Shimizu, H., Nukina, N.
PDB entry 2zhs: Crystal structure of BACE1 at pH 4.0
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-02-08
Authors: Shimizu, H., Nukina, N.
PDB entry 2zht: Crystal structure of BACE1 at pH 4.5
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-02-08
Authors: Shimizu, H., Nukina, N.
PDB entry 2zhu: Crystal structure of BACE1 at pH 5.0
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-02-08
Authors: Shimizu, H., Nukina, N.
PDB entry 2zhv: Crystal structure of BACE1 at pH 7.0
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-02-08
Authors: Shimizu, H., Nukina, N.
PDB entry 2zhw: Exploring thrombin S3 pocket
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2008-02-08
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zhx: Crystal structure of Uracil-DNA Glycosylase from Mycobacterium tuberculosis in complex with a proteinaceous inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bacillus phage PBS2; Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-02-11
Authors: Kaushal, P.S., Talawar, R.K., Krishna, P.D.V., Varshney, U., Vijayan, M.
PDB entry 2zhy: Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis
Classification: TRANSFERASE
Source organism: Burkholderia thailandensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-02-11
Authors: Moon, J.H., Park, A.K., Jang, E.H., Kim, H.S., Chi, Y.M.
PDB entry 2zhz: Crystal structure of a pduO-type ATP:cobalamin adenosyltransferase from Burkholderia thailandensis
Classification: TRANSFERASE
Source organism: Burkholderia thailandensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-02-12
Authors: Moon, J.H., Park, A.K., Jang, E.H., Kim, H.S., Chi, Y.M.
PDB entry 2zi0: Crystal structure of Tav2b/siRNA complex
Classification: GENE REGULATION/RNA
Source organism: Tomato aspermy virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2008-02-12
Authors: Yuan, Y.A., Chen, H.-Y.
PDB entry 2zi2: Thrombin Inhibition
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-02-13
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zi3: C4S-E247A dCK variant of dCK in complex with D-dA+ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-02-13
Authors: Sabini, E., Lavie, A.
PDB entry 2zi4: C4S dCK variant of dCK in complex with L-dA+ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-02-13
Authors: Sabini, E., Lavie, A.
PDB entry 2zi5: C4S dCK variant of dCK in complex with L-dA+UDP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2008-02-13
Authors: Sabini, E., Lavie, A.
PDB entry 2zi6: C4S dCK variant of dCK in complex with D-dA+UDP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2008-02-13
Authors: Sabini, E., Lavie, A.
PDB entry 2zi7: C4S dCK variant of dCK in complex with D-dG+UDP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2008-02-13
Authors: Sabini, E., Lavie, A.
PDB entry 2zi8: Crystal structure of the HsaC extradiol dioxygenase from M. tuberculosis in complex with 3,4-dihydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione (DHSA)
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-02-13
Authors: D'Angelo, I., Yam, K.C., Eltis, L.D., Strynadka, N.
PDB entry 2zi9: C4S-E247A dCK variant of dCK in complex with cladribine+ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2008-02-13
Authors: Sabini, E., Lavie, A.
PDB entry 2zia: C4S dCK variant of dCK in complex with cladribine+UDP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-02-13
Authors: Sabini, E., Lavie, A.
PDB entry 2zib: Crystal structure analysis of calcium-independent type II antifreeze protein
Classification: ANTIFREEZE PROTEIN
Source organism: Brachyopsis rostratus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2008-02-14
Authors: Nishimiya, Y., Sato, R., Kondo, H., Noro, N., Sugimoto, H., Suzuki, M., Tsuda, S.
PDB entry 2zic: Crystal structure of Streptococcus mutans dextran glucosidase
Classification: HYDROLASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-02-14
Authors: Hondoh, H., Saburi, W., Mori, H., Okuyama, M., Nakada, T., Matsuura, Y., Kimura, A.
PDB entry 2zid: Crystal structure of dextran glucosidase E236Q complex with isomaltotriose
Classification: HYDROLASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-02-14
Authors: Hondoh, H., Saburi, W., Mori, H., Okuyama, M., Nakada, T., Matsuura, Y., Kimura, A.
PDB entry 2zie: Crystal Structure of TTHA0409, Putatative DNA Modification Methylase from Thermus thermophilus HB8- Selenomethionine derivative
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-02-15
Authors: Morita, R., Ishikawa, H., Nakagawa, N., Masui, R., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zif: Crystal Structure of TTHA0409, Putative DNA Modification Methylase from Thermus thermophilus HB8- Complexed with S-Adenosyl-L-Methionine
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-02-15
Authors: Morita, R., Ishikawa, H., Nakagawa, N., Masui, R., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zig: Crystal Structure of TTHA0409, Putative DNA Modification Methylase from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-02-15
Authors: Morita, R., Ishikawa, H., Nakagawa, N., Masui, R., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zih: Crystal Structure of Yeast Vps74
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-02-18
Authors: Schmitz, K.R., Li, S., Setty, T.G., Ferguson, K.M.
PDB entry 2zii: Crystal Structure of Yeast Vps74-N-term Truncation Variant
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2008-02-18
Authors: Schmitz, K.R., Li, S., Setty, T.G., Ferguson, K.M.
PDB entry 2zij: Crystal Structure of Human Lysozyme Expressed in E. coli.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-02-18
Authors: Tamada, T., Kuroki, R., Koshiba, T.
PDB entry 2zik: Crystal Structure of Human Lysozyme from Pichia pastoris
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2008-02-18
Authors: Tamada, T., Kuroki, R., Koshiba, T.
PDB entry 2zil: Crystal Structure of Human Lysozyme from Urine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-02-18
Authors: Tamada, T., Kuroki, R., Koshiba, T.
PDB entry 2zim: Pyrrolysyl-tRNA synthetase bound to adenylated pyrrolysine and pyrophosphate
Classification: LIGASE
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-02-19
Authors: Steitz, T.A., Kavran, J.M.
PDB entry 2zin: Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with BocLys and an ATP analogue
Classification: LIGASE
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2008-02-19
Authors: Yanagisawa, T., Ishii, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zio: Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with AlocLys-AMP and PNP
Classification: LIGASE
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2008-02-19
Authors: Yanagisawa, T., Ishii, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ziq: Thrombin Inhibition
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-02-20
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zir: Crystal Structure of rat protein farnesyltransferase complexed with a benzofuran inhibitor and FPP
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-02-22
Authors: Fukami, T.A., Sogabe, S., Nagata, Y., Kondoh, O., Ishii, N.
PDB entry 2zis: Crystal Structure of rat protein farnesyltransferase complexed with a bezoruran inhibitor and FPP
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-02-22
Authors: Fukami, T.A., Sogabe, S., Nagata, Y., Kondoh, O., Ishii, N.
PDB entry 2zit: Structure of the eEF2-ExoA-NAD+ complex
Classification: BIOSYNTHETIC PROTEIN/TRANSFERASE
Source organism: Pseudomonas aeruginosa; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-02-24
Authors: Jorgensen, R., Merrill, A.R.
PDB entry 2ziu: Crystal structure of the Mus81-Eme1 complex
Classification: HYDROLASE
Source organism: Danio rerio; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-02-25
Authors: Chang, J.H., Kim, J.J., Choi, J.M., Lee, J.H., Cho, Y.
PDB entry 2ziv: Crystal structure of the Mus81-Eme1 complex
Classification: HYDROLASE
Source organism: Danio rerio; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-02-25
Authors: Chang, J.H., Kim, J.J., Choi, J.M., Lee, J.H., Cho, Y.
PDB entry 2ziw: Crystal structure of the Mus81-Eme1 complex
Classification: HYDROLASE
Source organism: Danio rerio; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-02-25
Authors: Chang, J.H., Kim, J.J., Choi, J.M., Lee, J.H., Cho, Y.
PDB entry 2zix: Crystal structure of the Mus81-Eme1 complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2008-02-25
Authors: Chang, J.H., Kim, J.J., Choi, J.M., Lee, J.H., Cho, Y.
PDB entry 2ziy: Crystal structure of squid rhodopsin
Classification: SIGNALING PROTEIN
Source organism: Todarodes pacificus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2008-02-27
Authors: Miyano, M., Shimamura, T.
PDB entry 2ziz: Crystal structure of Mycobacterium tuberculosis S-adenosyl-L-homocysteine hydrolase in ternary complex with NAD and 3-deazaadenosine
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-02-29
Authors: Reddy, M.C.M., Gokulan, K., Shetty, N.D., Owen, J.L., Ioerger, T.R., Sacchettini, J.C.
PDB entry 2zj0: Crystal structure of Mycobacterium tuberculosis S-Adenosyl-L-homocysteine hydrolase in ternary complex with NAD and 2-fluoroadenosine
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2008-02-29
Authors: Reddy, M.C.M., Gokulan, K., Shetty, N.D., Owen, J.L., Ioerger, T.R., Sacchettini, J.C.
PDB entry 2zj1: Crystal structure of Mycobacterium tuberculosis S-adenosyl-L-homocysteine hydrolase in ternary complex with NAD and 3'-keto-aristeromycin
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2008-02-29
Authors: Reddy, M.C.M., Gokulan, K., Shetty, N.D., Owen, J.L., Ioerger, T.R., Sacchettini, J.C.
PDB entry 2zj2: Archaeal DNA helicase Hjm apo state in form 1
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-02-29
Authors: Oyama, T., Oka, H., Fujikane, R., Ishino, Y., Morikawa, K.
PDB entry 2zj3: Isomerase domain of human glucose:fructose-6-phosphate amidotransferase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-02-29
Authors: Nakaishi, Y., Bando, M., Kondo, K., Tsuge, H.
PDB entry 2zj4: Isomerase domain of human glucose:fructose-6-phosphate amidotransferase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-02-29
Authors: Nakaishi, Y., Bando, M., Kondo, K., Tsuge, H.
PDB entry 2zj5: Archaeal DNA helicase Hjm complexed with ADP in form 1
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-02-29
Authors: Oyama, T., Oka, H., Fujikane, R., Ishino, Y., Morikawa, K.
PDB entry 2zj6: Crystal structure of D337A mutant of Pseudomonas sp. MIS38 lipase
Classification: HYDROLASE
Source organism: Pseudomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-02-29
Authors: Angkawidjaja, C., Kuwahara, K., Kanaya, S.
PDB entry 2zj7: Crystal structure of D157A mutant of Pseudomonas sp. MIS38 lipase
Classification: HYDROLASE
Source organism: Pseudomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2008-02-29
Authors: Angkawidjaja, C., Kuwahara, K., Kanaya, S.
PDB entry 2zj8: Archaeal DNA helicase Hjm apo state in form 2
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-02-29
Authors: Oyama, T., Oka, H., Fujikane, R., Ishino, Y., Morikawa, K.
PDB entry 2zj9: X-ray crystal structure of AmpC beta-Lactamase (AmpC(D)) from an Escherichia coli with a Tripeptide Deletion (Gly286 Ser287 Asp288) on the H10 Helix
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-02-29
Authors: Yamaguchi, Y., Sato, G., Yamagata, Y., Wachino, J., Arakawa, Y., Kurosaki, H.
PDB entry 2zja: Archaeal DNA helicase Hjm complexed with AMPPCP in form 2
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-02-29
Authors: Oyama, T., Oka, H., Fujikane, R., Ishino, Y., Morikawa, K.
PDB entry 2zjb: Crystal structure of the human Dmc1-M200V polymorphic variant
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2008-03-02
Authors: Hikiba, J., Hirota, K., Kagawa, W., Ikawa, S., Kinebuchi, T., Sakane, I., Takizawa, Y., Yokoyama, S., Mandon-Pepin, B., Nicolas, A., Shibata, T., Ohta, K., Kurumizaka, H.
PDB entry 2zjc: TNFR1 selectve TNF mutant; R1-6
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-03-05
Authors: Mukai, Y., Yamagata, Y., Tsutsumi, Y.
PDB entry 2zjd: Crystal Structure of LC3-p62 complex
Classification: Apoptosis inhibitor/Apoptosis
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2008-03-05
Authors: Ichimura, Y., Kumanomidou, T., Sou, Y., Mizushima, T., Ezaki, J., Ueno, T., Kominami, E., Yamane, T., Tanaka, K., Komatsu, M.
PDB entry 2zjf: Crystal structure of Mycobacterium tuberculosis epoxide hydrolase B complexed with an inhibitor
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-03-07
Authors: Biswal, B.K., TB Structural Genomics Consortium (TBSGC)
PDB entry 2zjg: Crystal structural of mouse kynurenine aminotransferase III
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-03-07
Authors: Han, Q., Cai, T., Tagle, D.A., Robinson, H., Li, J.
PDB entry 2zjh: Crystal structure of the human BACE1 catalytic domain in complex with N-(1-benzyl-piperidin-4-yl)-4-mercapto-butyramide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-03-07
Authors: Randal, M., Lam, M.B., Romanowski, M.J.
PDB entry 2zji: Crystal structure of the human BACE1 catalytic domain in complex with N-[1-(2,6-dimethoxy-benzyl)-piperidin-4-yl]-4-mercapto-butyramide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-03-07
Authors: Randal, M., Lam, M.B., Romanowski, M.J.
PDB entry 2zjj: Crystal structure of the human BACE1 catalytic domain in complex with 4-(4-fluoro-benzyl)-piperazine-2-carboxylic acid (2-mercapto-ethyl)-amide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-03-07
Authors: Randal, M., Lam, M.B., Romanowski, M.J.
PDB entry 2zjk: Crystal structure of the human BACE1 catalytic domain in complex with 4-(4-fluoro-benzyl)-piperazine-2-carboxylic acid(3-mercapto-propyl)-amide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-03-07
Authors: Randal, M., Lam, M.B., Lu, W., Romanowski, M.J.
PDB entry 2zjl: Crystal structure of the human BACE1 catalytic domain in complex with N-[1-(5-bromo-2,3-dimethoxy-benzyl)-piperidin-4-yl]-4-mercapto-butyramide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-03-07
Authors: Randal, M., Lam, M.B., Lu, W., Romanowski, M.J.
PDB entry 2zjm: Crystal structure of the human BACE1 catalytic domain in complex with N-[1-(5-chloro-2-isopropoxy-3-methoxy-benzyl)-piperidin-4-yl]-2-(4-sulfamoyl-phenoxy)-acetamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-03-07
Authors: Allison, T.J., Pham, P., Romanowski, M.J., Munshi, S.K.
PDB entry 2zjn: Crystal structure of the human BACE1 catalytic domain in complex with N-[1-(5-chloro-2-isopropoxy-3-methoxy-benzyl)-piperidin-4-yl]-2-(2-methyl-4-sulfamoyl-phenoxy)-acetamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-03-07
Authors: Randal, M., Lam, M.B., Fahr, B.T., Romanowski, M.J.
PDB entry 2zjo: Crystal structure of hepatitis C virus NS3 helicase with a novel inhibitor
Classification: HYDROLASE
Source organism: Hepatitis C virus (isolate Taiwan)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-03-07
Authors: Liaw, S.H., Chen, S.J., Hu, C.Y., Chi, W.K., Chu, I.D., Hwang, L.H., Chern, J.W., Chen, D.S.
PDB entry 2zjp: Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radiodurans
Classification: RIBOSOME/ANTIBIOTIC
Source organism: DEINOCOCCUS RADIODURANS; STREPTOMYCES ACTUOSUS
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2008-03-07
Authors: Harms, J.M., Wilson, D.N., Schluenzen, F., Connell, S.R., Stachelhaus, T., Zaborowska, Z., Spahn, C.M.T., Fucini, P.
PDB entry 2zjq: Interaction of L7 with L11 induced by Microccocin binding to the Deinococcus radiodurans 50S subunit
Classification: RIBOSOME
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-03-08
Authors: Harms, J.M., Wilson, D.N., Schluenzen, F., Connell, S.R., Stachelhaus, T., Zaborowska, Z., Spahn, C.M.T., Fucini, P.
PDB entry 2zjr: Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans
Classification: RIBOSOME
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2008-03-08
Authors: Harms, J.M., Wilson, D.N., Schluenzen, F., Connell, S.R., Stachelhaus, T., Zaborowska, Z., Spahn, C.M.T., Fucini, P.
PDB entry 2zjs: Crystal Structure of SecYE translocon from Thermus thermophilus with a Fab fragment
Classification: PROTEIN TRANSPORT/IMMUNE SYSTEM
Source organism: Mus musculus; Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-03-08
Authors: Tsukazaki, T., Mori, H., Fukai, S., Ishitani, R., Perederina, A., Vassylyev, D.G., Ito, K., Nureki, O.
PDB entry 2zjt: Crystal structure of dna gyrase B' domain sheds lights on the mechanism for T-segment navigation
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-03-10
Authors: Fu, G.S., Zhu, D.Y., Hu, Y.L., Wang, D.C.
PDB entry 2zju: Crystal Structure of Lymnaea stagnalis Acetylcholine Binding Protein (Ls-AChBP) Complexed with Imidacloprid
Classification: SIGNALING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2008-03-10
Authors: Okajima, T., Ihara, M., Yamashita, A., Oda, T., Morimoto, T., Matsuda, K.
PDB entry 2zjv: Crystal Structure of Lymnaea stagnalis Acetylcholine Binding Protein (Ls-AChBP) Complexed with Clothianidin
Classification: SIGNALING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-03-10
Authors: Okajima, T., Ihara, M., Yamashita, A., Oda, T., Morimoto, T., Matsuda, K.
PDB entry 2zjw: Crystal structure of human CK2 alpha complexed with Ellagic acid
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-03-11
Authors: Sekiguchi, Y., Kinoshita, T., Nakaniwa, T., Tada, T.
PDB entry 2zjx: Bovine pancreatic trypsin inhibitor (BPTI) containing only the [5,55] disulfide bond
Classification: HYDROLASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2008-03-11
Authors: Islam, M.M., Sohya, S., Noguchi, K., Yohda, M., Kuroda, Y.
PDB entry 2zjy: Structure of the K349P mutant of Gi alpha 1 subunit bound to ALF4 and GDP
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-03-11
Authors: Morikawa, T., Muroya, A., Sugio, S., Wakamatsu, K., Kohno, T.
PDB entry 2zjz: Structure of the K349P mutant of Gi alpha 1 subunit bound to GDP
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-03-11
Authors: Morikawa, T., Muroya, A., Sugio, S., Wakamatsu, K., Kohno, T.
PDB entry 2zk0: Human peroxisome proliferator-activated receptor gamma ligand binding domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2008-03-12
Authors: Waku, T., Shiraki, T., Oyama, T., Fujimoto, Y., Morikawa, K.
PDB entry 2zk1: Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with 15-deoxy-delta12,14-prostaglandin J2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2008-03-12
Authors: Waku, T., Shiraki, T., Oyama, T., Fujimoto, Y., Morikawa, K.
PDB entry 2zk2: Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with glutathion conjugated 15-deoxy-delta12,14-prostaglandin J2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2008-03-12
Authors: Waku, T., Shiraki, T., Oyama, T., Fujimoto, Y., Morikawa, K.
PDB entry 2zk3: Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with 8-oxo-eicosatetraenoic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2008-03-12
Authors: Waku, T., Shiraki, T., Oyama, T., Fujimoto, Y., Morikawa, K.
PDB entry 2zk4: Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with 15-oxo-eicosatetraenoic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2008-03-12
Authors: Waku, T., Shiraki, T., Oyama, T., Fujimoto, Y., Morikawa, K.
PDB entry 2zk5: Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with nitro-233
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2008-03-12
Authors: Waku, T., Shiraki, T., Oyama, T., Fujimoto, Y., Morikawa, K.
PDB entry 2zk6: Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with C8-BODIPY
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2008-03-12
Authors: Waku, T., Shiraki, T., Oyama, T., Fujimoto, Y., Morikawa, K.
PDB entry 2zk7: Structure of a C-terminal deletion mutant of Thermoplasma acidophilum aldohexose dehydrogenase (AldT)
Classification: OXIDOREDUCTASE
Source organism: Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2008-03-12
Authors: Nishioka, T., Yasutake, Y., Nishiya, Y., Tamura, N., Tamura, T.
PDB entry 2zk9: Crystal Structure of Protein-glutaminase
Classification: HYDROLASE
Source organism: Chryseobacterium proteolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2008-03-13
Authors: Hashizume, R.
PDB entry 2zka: Urate oxidase complexed with 8-azaxanthine under 1.0 MPa oxygen pressure
Classification: OXIDOREDUCTASE
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2008-03-13
Authors: Colloc'h, N., Gabison, L., Chiadmi, M., Abraini, J.H., Prange, T.
PDB entry 2zkb: Urate oxidase complexed with 8-azaxanthine under 2.5 MPa oxygen pressure
Classification: OXIDOREDUCTASE
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2008-03-14
Authors: Colloc'h, N., Gabison, L., Chiadmi, M., Abraini, J.H., Prange, T.
PDB entry 2zkc: Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with bisphenol Z
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-03-14
Authors: Matsushima, A., Kakuta, Y., Teramoto, T., Shimohigashi, Y.
PDB entry 2zkd: Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA
Classification: LIGASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-03-19
Authors: Arita, K., Ariyoshi, M., Tochio, H., Nakamura, Y., Shirakawa, M.
PDB entry 2zke: Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA
Classification: LIGASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-03-19
Authors: Arita, K., Ariyoshi, M., Tochio, H., Nakamura, Y., Shirakawa, M.
PDB entry 2zkf: Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA
Classification: LIGASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-03-19
Authors: Arita, K., Ariyoshi, M., Tochio, H., Nakamura, Y., Shirakawa, M.
PDB entry 2zkg: Crystal structure of unliganded SRA domain of mouse Np95
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2008-03-19
Authors: Arita, K., Ariyoshi, M., Tochio, H., Nakamura, Y., Shirakawa, M.
PDB entry 2zkh: Human thrombopoietin neutralizing antibody TN1 FAB
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2008-03-21
Authors: Arai, S., Tamada, T., Honjo, E., Maeda, Y., Kuroki, R.
PDB entry 2zki: Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872)
Classification: TRANSCRIPTION
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-03-21
Authors: Kawano, T., Teshima, N., Suzuki, A., Kuramitsu, S., Yamane, T.
PDB entry 2zkj: Crystal structure of human PDK4-ADP complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-03-25
Authors: Kato, M., Wynn, R.M., Chuang, J.L., Tso, S.-C., Li, J., Chuang, D.T.
PDB entry 2zkl: Crystal Structure of capsular polysaccharide assembling protein CapF from staphylococcus aureus
Classification: ISOMERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2008-03-25
Authors: Miyafusa, T., Tanaka, Y., Yao, M., Tanaka, I., Tsumoto, K.
PDB entry 2zkm: Crystal Structure of Phospholipase C Beta 2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2008-03-26
Authors: Hicks, S.N., Jezyk, M.R., Gershberg, S., Seifert, J.P., Harden, T.K., Sondek, J.
PDB entry 2zkn: X-ray structure of mutant galectin-1/lactose complex
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2008-03-26
Authors: Abe, A., Yoshida, H., Kamitori, S.
PDB entry 2zko: Structural basis for dsRNA recognition by NS1 protein of human influenza virus A
Classification: RNA BINDING PROTEIN/RNA
Source organism: Influenza A virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-03-26
Authors: Yuan, Y.A.
PDB entry 2zks: Structural insights into the proteolytic machinery of apoptosis-inducing Granzyme M
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-03-28
Authors: Wu, L.F., Wang, L., Hua, G.Q., Liu, K., Yang, X., Zhai, Y.J., Sun, F., Fan, Z.S.
PDB entry 2zkt: Structure of PH0037 protein from Pyrococcus horikoshii
Classification: ISOMERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-03-29
Authors: Lokanath, N.K., Pampa, K.J., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zku: Structure of hepatitis C virus NS5B polymerase in a new crystal form
Classification: TRANSFERASE
Source organism: Hepatitis C virus subtype 1b
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-03-31
Authors: Biswal, B.K.
PDB entry 2zkw: Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group P21
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-03-31
Authors: Yoshikawa, S., Kukimoto-Niino, M., Ito, K., Chen, L., Fu, Z.Q., Chrzas, J., Wang, B.C., Shirouzu, M., Urushitani, M., Takahashi, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zkx: Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group I212121
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2008-03-31
Authors: Yoshikawa, S., Kukimoto-Niino, M., Ito, K., Chen, L., Fu, Z.Q., Chrzas, J., Wang, B.C., Shirouzu, M., Urushitani, M., Takahashi, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zky: Crystal structure of human Cu-Zn superoxide dismutase mutant G93A
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-03-31
Authors: Yoshikawa, S., Kukimoto-Niino, M., Ito, K., Shirouzu, M., Urushitani, M., Takahashi, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zkz: Crystal structure of the transcriptional repressor PagR of Bacillus anthracis
Classification: TRANSCRIPTION
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-01
Authors: Zhao, H., Volkov, A., Veldore, V.H., Varughese, K.I.
PDB entry 2zl0: Crystal structure of H.pylori ClpP
Classification: HYDROLASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-04-02
Authors: Kim, D.Y., Kim, K.K.
PDB entry 2zl1: MP1-p14 Scaffolding complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-02
Authors: Schrag, J.D., Cygler, M., Munger, C., Magloire, A.
PDB entry 2zl2: Crystal structure of H.pylori ClpP in complex with the peptide NVLGFTQ
Classification: HYDROLASE
Source organism: Helicobacter pylori; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-04-02
Authors: Kim, D.Y., Kim, K.K.
PDB entry 2zl3: Crystal structure of H.pylori ClpP S99A
Classification: HYDROLASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2008-04-02
Authors: Kim, D.Y., Kim, K.K.
PDB entry 2zl4: Crystal structure of H.pylori ClpP S99A in complex with the peptide AAAA
Classification: HYDROLASE
Source organism: Helicobacter pylori; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-04-02
Authors: Kim, D.Y., Kim, K.K.
PDB entry 2zl5: Atomic resolution structural characterization of recognition of histo-blood group antigen by Norwalk virus
Classification: VIRAL PROTEIN
Source organism: Norwalk virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2008-04-02
Authors: Choi, J.M., Huston, A.M., Estes, M.K., Prasad, B.V.V.
PDB entry 2zl6: Atomic resolution structural characterization of recognition of histo-blood group antigens by Norwalk virus
Classification: VIRAL PROTEIN
Source organism: Norwalk virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2008-04-02
Authors: Choi, J.M., Huston, A.M., Estes, M.K., Prasad, B.V.V.
PDB entry 2zl7: Atomic resolution structural characterization of recognition of histo-blood group antigens by Norwalk virus
Classification: VIRAL PROTEIN
Source organism: Norwalk virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2008-04-02
Authors: Choi, J.M., Huston, A.M., Estes, M.K., Prasad, B.V.V.
PDB entry 2zl8: Crystal structure of copper amine oxidase from Arthrobacter globiformis: Substrate Schiff-base intermediate formed with ethylamine
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2008-04-03
Authors: Murakawa, T., Okajima, T.
PDB entry 2zl9: 2-Substituted-16-ene-22-thia-1alpha,25-dihydroxy-26,27-dimethyl-19-norvitamin D3 analogs: Synthesis, biological evaluation and crystal structure
Classification: HORMONE
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-04-04
Authors: Shimizu, M., Miyamoto, Y., Nakabayashi, M., Masuno, H., Ikura, T., Ito, N.
PDB entry 2zla: 2-Substituted-16-ene-22-thia-1alpha,25-dihydroxy-26,27-dimethyl-19-norvitamin D3 analogs: Synthesis, biological evaluation and crystal structure
Classification: HORMONE
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-04
Authors: Shimizu, M., Miyamoto, Y., Nakabayashi, M., Masuno, H., Ikura, T., Ito, N.
PDB entry 2zlb: Crystal structure of APO form of rat catechol-O-methyltransferase
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-04-04
Authors: Tsuji, E.
PDB entry 2zlc: 2-Substituted-16-ene-22-thia-1alpha,25-dihydroxy-26,27-dimethyl-19-norvitamin D3 analogs: Synthesis, biological evaluation and crystal structure
Classification: HORMONE
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-04
Authors: Shimizu, M., Miyamoto, Y., Nakabayashi, M., Masuno, H., Ikura, T., Ito, N.
PDB entry 2zld: Structure of OmpF co-crystallized with T83
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-04-09
Authors: Cramer, W.A., Zakharov, S.D., Yamashita, E.
PDB entry 2zle: Cryo-EM structure of DegP12/OMP
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 28 Å
Deposited: 2008-04-09
Authors: Schaefer, E., Saibil, H.R.
PDB entry 2zlf: The Structural Basis for Peptidomimetic Inhibition of Eukaryotic Ribonucleotide Reductase
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2008-04-09
Authors: Xu, H., Fairman, J.W., Wijerathna, S.R., LaMacchia, J., Kreischer, N.R., Helmbrecht, E., Cooperman, B.S., Dealwis, C.
PDB entry 2zlg: The Structual Basis for Peptidomimetic Inhibition of Eukaryotic Ribonucleotide Reductase
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2008-04-09
Authors: Xu, H., Fairman, J.W., Wijerathna, S.R., LaMacchia, J., Kreischer, N.R., Helmbrecht, E., Cooperman, B.S., Dealwis, C.
PDB entry 2zlt: Horse methemoglobin high salt, pH 7.0
Classification: Oxygen storage, Oxygen transport
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-04-10
Authors: Kaushal, P.S., Sankaranarayanan, R., Vijayan, M.
PDB entry 2zlu: Horse methemoglobin high salt, pH 7.0 (88% relative humidity)
Classification: Oxygen storage, Oxygen transport
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-10
Authors: Kaushal, P.S., Sankaranarayanan, R., Vijayan, M.
PDB entry 2zlv: Horse methemoglobin high salt, pH 7.0 (79% relative humidity)
Classification: Oxygen storage, Oxygen transport
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-10
Authors: Kaushal, P.S., Sankaranarayanan, R., Vijayan, M.
PDB entry 2zlw: Horse methemoglobin high salt, pH 7.0 (75% relative humidity)
Classification: Oxygen storage, Oxygen transport
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-04-10
Authors: Kaushal, P.S., Sankaranarayanan, R., Vijayan, M.
PDB entry 2zlx: Horse methemoglobin high salt, pH 7.0 (66% relative humidity)
Classification: Oxygen storage, Oxygen transport
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-04-10
Authors: Kaushal, P.S., Sankaranarayanan, R., Vijayan, M.
PDB entry 2zly: Structure of 6-aminohexanoate-dimer hydrolase, D370Y mutant
Classification: HYDROLASE
Source organism: FLAVOBACTERIUM SP.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2008-04-10
Authors: Ohki, T., Shibata, N., Higuchi, Y., Kawashima, Y., Takeo, M., Kato, D., Negoro, S.
PDB entry 2zm0: Structure of 6-aminohexanoate-dimer hydrolase, G181D/H266N/D370Y mutant
Classification: HYDROLASE
Source organism: FLAVOBACTERIUM SP.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-04-10
Authors: Ohki, T., Shibata, N., Higuchi, Y., Kawashima, Y., Takeo, M., Kato, D., Nego, S.
PDB entry 2zm1: Crystal structure of imidazo pyrazin 1 bound to the kinase domain of human LCK, (auto-phosphorylated on TYR394)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-04-10
Authors: Tsuji, E.
PDB entry 2zm2: Structure of 6-aminohexanoate-dimer hydrolase, A61V/A124V/R187S/F264C/G291R/G338A/D370Y mutant (Hyb-S4M94)
Classification: HYDROLASE
Source organism: FLAVOBACTERIUM SP.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-04-10
Authors: Ohki, T., Shibata, N., Higuchi, Y., Kawashima, Y., Takeo, M., Kato, D., Nego, S.
PDB entry 2zm3: Complex Structure of Insulin-like Growth Factor Receptor and Isoquinolinedione Inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-04-10
Authors: Xu, W., Mayer, S.C., Boschelli, F., Johnson, M., Dwyer, B.
PDB entry 2zm4: Crystal structure of imidazo quinoxaline 1 bound to the kinase domain of human LCK, activated form (auto-phosphorylated on TYR394)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-04-11
Authors: Tsuji, E.