LiteFold/PDB huggingface dataset:
PDB entry 4dhl: Crystal structure of red kidney bean purple acid phosphatase in complex with Maybridge fragment MO07123
Classification: HYDROLASE
Source organism: Phaseolus vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-29
Authors: Feder, D., Clayton, D.J., Hussein, W.M., Schenk, G., McGeary, R., Guddat, L.W.
PDB entry 4dhm: Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-01-30
Authors: Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.
PDB entry 4dhn: Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-01-30
Authors: Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.
PDB entry 4dho: Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-01-30
Authors: Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.
PDB entry 4dhp: Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-01-30
Authors: Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.
PDB entry 4dhq: Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-01-30
Authors: Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.
PDB entry 4dhr: Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2012-01-30
Authors: Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.
PDB entry 4dhs: Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2012-01-30
Authors: Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.
PDB entry 4dht: Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-01-30
Authors: Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.
PDB entry 4dhu: Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2012-01-30
Authors: Thiel, P., Roeglin, L., Kohlbacher, O., Ottmann, C.
PDB entry 4dhv: Crystal structure of the Pyrococcus furiosus ferredoxin D14C variant containing the heterometallic [AgFe3S4] cluster
Classification: ELECTRON TRANSPORT
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-01-30
Authors: Jakab-Simon, I.N., Christensen, H.E.M., Haahr, L.T.
PDB entry 4dhw: Crystal structure of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with Adipic acid at 2.4 Angstrom resolution
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2012-01-30
Authors: Kumar, A., Singh, A., Singh, N., Sinha, M., Sharma, S., Arora, A., Singh, T.P.
PDB entry 4dhx: ENY2:GANP complex
Classification: TRANSPORT PROTEIN/DNA binding Protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-01-30
Authors: Stewart, M., Jani, D.
PDB entry 4dhy: Crystal structure of human glucokinase in complex with glucose and activator
Classification: TRANSFERASE/TRANSFERASE ACTIVATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2012-01-30
Authors: Liu, S.
PDB entry 4dhz: The structure of h/ceOTUB1-ubiquitin aldehyde-UBC13~Ub
Classification: HYDROLASE/SIGNALING PROTEIN/LIGASE
Source organism: Caenorhabditis elegans; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2012-01-30
Authors: Wiener, R., Zhang, X., Wang, T., Wolberger, C.
PDB entry 4di0: The structure of Rubrerythrin from Burkholderia pseudomallei
Classification: OXIDOREDUCTASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-01-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4di1: Crystal structure of enoyl-CoA hydratase EchA17 from Mycobacterium marinum
Classification: LYASE
Source organism: Mycobacterium marinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-01-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4di2: Crystal structure of BACE1 in complex with hydroxyethylamine inhibitor 37
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-01-30
Authors: Whittington, D.A., Long, A.M.
PDB entry 4di3: Crystal structure of a 2:1 complex of Treponema pallidum TatP(T) (Tp0957) bound to TatT (Tp0956)
Classification: TRANSPORT PROTEIN
Source organism: Treponema pallidum subsp. pallidum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2012-01-30
Authors: Brautigam, C.A., Deka, R.K., Norgard, M.V.
PDB entry 4di4: Crystal structure of a 3:1 complex of Treponema pallidum TatP(T) (Tp0957) bound to TatT (Tp0956)
Classification: TRANSPORT PROTEIN
Source organism: Treponema pallidum subsp. pallidum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.714 Å
Deposited: 2012-01-30
Authors: Brautigam, C.A., Deka, R.K., Norgard, M.V.
PDB entry 4di5: Co-crystal structure of WT 5-epi-Aristolochene synthase from Nicotiana tobaccum with geraniline
Classification: Lyase/Lyase inhibitor
Source organism: Nicotiana tabacum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-30
Authors: Noel, J.P., Starks, C., Crenshaw, C.M.
PDB entry 4di6: crystal structure of nucleoside-diphosphate kinase from Borrelia burgdorferi
Classification: TRANSFERASE
Source organism: Borrelia burgdorferi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-01-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4di8: CRYSTAL STRUCTURE OF THE D248A mutant of 2-PYRONE-4,6-DICARBOXYLIC ACID HYDROLASE FROM SPHINGOMONAS PAUCIMOBILIS complexed with substrate at pH 8.5
Classification: HYDROLASE
Source organism: Sphingomonas paucimobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2012-01-11
Authors: Malashkevich, V.N., Toro, R., Hobbs, M.E., Raushel, F.M., Almo, S.C.
PDB entry 4di9: CRYSTAL STRUCTURE OF THE D248A mutant of 2-PYRONE-4,6-DICARBOXYLIC ACID HYDROLASE FROM SPHINGOMONAS PAUCIMOBILIS complexed with substrate at pH 6.5
Classification: HYDROLASE
Source organism: Sphingomonas paucimobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2012-01-11
Authors: Malashkevich, V.N., Toro, R., Hobbs, M.E., Raushel, F.M., Almo, S.C.
PDB entry 4dia: CRYSTAL STRUCTURE OF THE D248N mutant of 2-PYRONE-4,6-DICARBOXYLIC ACID HYDROLASE FROM SPHINGOMONAS PAUCIMOBILIS complexed with substrate at pH 4.6
Classification: HYDROLASE
Source organism: Sphingomonas paucimobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-01-11
Authors: Malashkevich, V.N., Toro, R., Hobbs, M.E., Raushel, F.M., Almo, S.C.
PDB entry 4dib: The crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bacillus anthracis str. Sterne
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2012-01-30
Authors: Nocek, B., Makowska-Grzyska, M., Papazisi, L., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4did: Crystal structure of Salmonella effector N-terminal domain SopB in complex with Cdc42
Classification: HYDROLASE/HYDROLASE
Source organism: Homo sapiens; Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3501 Å
Deposited: 2012-01-30
Authors: Burkinshaw, B.J., Strynadka, N.C.J.
PDB entry 4die: Crystal structure of a cytidylate kinase CmK from Mycobacterium abscessus bound to cytidine-5'-monophosphate
Classification: TRANSFERASE
Source organism: Mycobacterium abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2012-01-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4dif: Structure of A1-type ketoreductase
Classification: OXIDOREDUCTASE
Source organism: Streptomyces nodosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.521 Å
Deposited: 2012-01-30
Authors: Zheng, J., Keatinge-Clay, A.T.
PDB entry 4dig: Crystal Structure of C-lobe of Bovine lactoferrin Complexed with N-acetylmuramyl l-alanyl d-isoglutamine at 1.8 A Resolution
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-01-31
Authors: Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4dih: X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of sodium ions
Classification: HYDROLASE/HYDROLASE INHIBITOR/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-01-31
Authors: Russo Krauss, I., Merlino, A., Mazzarella, L., Sica, F.
PDB entry 4dii: X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of potassium ions
Classification: HYDROLASE/HYDROLASE INHIBITOR/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2012-01-31
Authors: Russo Krauss, I., Merlino, A., Mazzarella, L., Sica, F.
PDB entry 4dij: The Central Valine Concept Provides an Entry in a New Class of Non Peptide Inhibitors of the P53-MDM2 Interaction
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-01-31
Authors: Kallen, J.
PDB entry 4dik: Flavo Di-iron protein H90A mutant from Thermotoga maritima
Classification: ELECTRON TRANSPORT
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-01-31
Authors: Fang, H., Caranto, J.D., Taylor, A.B., Hart, P.J., Kurtz Jr., D.M.
PDB entry 4dil: Flavo Di-iron protein H90N mutant from Thermotoga maritima
Classification: ELECTRON TRANSPORT
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-01-31
Authors: Fang, H., Caranto, J.D., Taylor, A.B., Hart, P.J., Kurtz, D.M.
PDB entry 4dim: Crystal structure of phosphoribosylglycinamide synthetase from Anaerococcus prevotii
Classification: LIGASE
Source organism: Anaerococcus prevotii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2012-01-31
Authors: Michalska, K., Wu, R., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4din: Novel Localization and Quaternary Structure of the PKA RI beta Holoenzyme
Classification: Transferase/Transport Protein
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2012-01-31
Authors: Ilouz, R., Bubis, J., Wu, J., Yim, Y.Y., Deal, M.S., Kornev, A.P., Ma, Y., Blumenthal, D.K., Taylor, S.S.
PDB entry 4dio: The crystal structure of transhydrogenase from Sinorhizobium meliloti
Classification: OXIDOREDUCTASE
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-01-31
Authors: Zhang, Z., Chamala, S., Evans, B., Foti, R., Gizzi, A., Hillerich, B., Kar, A., Lafleur, J., Seidel, R., Villigas, G., Zencheck, W., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4dip: Crystal structure of human Peptidyl-prolyl cis-trans isomerase FKBP14
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2012-01-31
Authors: Krojer, T., Kiyani, W., Goubin, S., Muniz, J.R.C., Filippakopoulos, P., Arrowsmith, C.H., Edwards, A., Bountra, C., von Delft, F., Oppermann, U., Zschocke, J., Yue, W.W., Structural Genomics Consortium (SGC)
PDB entry 4diq: Crystal Structure of human NO66
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-01-31
Authors: Vollmar, M., Krojer, T., Ng, S., Pilka, E., Bray, J., Pike, A.C.W., Filippakopoulos, P., Roos, A., Arrowsmith, C.H., Edwards, E., Bountra, C., von Delft, F., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 4dir: 2.6 Angstrom X-ray structure of human CA(2+)-S100A5
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-01-31
Authors: Liriano, M.A., Toth, E.A., Weber, D.J.
PDB entry 4dit: Crystal Structure of GSK3beta in complex with a Imidazopyridine inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-01-31
Authors: Kim, H.T., Lee, S.C., Chang, H.J.
PDB entry 4diu: Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR94
Classification: Structural Genomics, Unknown Function
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-01-31
Authors: Seetharaman, J., Lew, S., Wang, D., Kohan, E., Patel, D., Whitehead, T., Fleishman, S., Ciccosanti, C., Xiao, R., Everett, J.K., Acton, T.B., Baker, D., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 4dix: Crystal structure of the Ig-PH domain of actin-binding protein SCAB1
Classification: PROTEIN BINDING
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-02-01
Authors: Zhang, W., Ye, K.
PDB entry 4diy: Thaumatin I by Classical Hanging Drop Method at 1.98A resolution for Unique Water Distribution
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2012-02-01
Authors: Pechkova, E., Sivozhelezov, V., Belmonte, L., Nicolini, C.
PDB entry 4diz: Thaumatin I by Classical Hanging Drop Method at 1.98A resolution for Unique Water Distribution
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2012-02-01
Authors: Pechkova, E., Sivozhelezov, V., Belmonte, L., Nicolini, C.
PDB entry 4dj0: Thaumatin I by Langmuir-Blodgett Hanging Drop Method at 1.98A resolution for Unique Water Distribution
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2012-02-01
Authors: Pechkova, E., Sivozhelezov, V., Belmonte, L., Nicolini, C.
PDB entry 4dj1: Thaumatin I by Langmuir-Blodgett Hanging Drop Method at 1.98A resolution for Unique Water Distribution
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2012-02-01
Authors: Pechkova, E., Sivozhelezov, V., Belmonte, L., Nicolini, C.
PDB entry 4dj2: Unwinding the Differences of the Mammalian PERIOD Clock Proteins from Crystal Structure to Cellular Function
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2012-02-01
Authors: Kucera, N., Schmalen, I., Hennig, S., Oellinger, R., Strauss, H.M., Grudziecki, A., Wieczorek, C., Kramer, A., Wolf, E.
PDB entry 4dj3: Unwinding the Differences of the Mammalian PERIOD Clock Proteins from Crystal Structure to Cellular Function
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-02-01
Authors: Wolf, E., Kucera, N., Hennig, S.
PDB entry 4dj4: X-ray structure of mutant N211D of bifunctional nuclease TBN1 from Solanum lycopersicum (Tomato)
Classification: HYDROLASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-02-01
Authors: Koval, T., Stepankova, A., Lipovova, P., Podzimek, T., Matousek, J., Duskova, J., Skalova, T., Hasek, J., Dohnalek, J.
PDB entry 4dj5: Proteinase K by Langmuir-Blodgett Hanging Drop Method at 1.8A resolution for Unique Water Distribution
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-01
Authors: Pechkova, E., Sivozhelezov, V., Belmonte, L., Nicolini, C.
PDB entry 4dj6: Structure of the hemagglutinin from a highly pathogenic H7N7 influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Netherlands/219/2003(H7N7))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2012-02-01
Authors: Yang, H., Carney, P.J., Donis, R.O., Stevens, J.
PDB entry 4dj7: Structure of the hemagglutinin complexed with 3SLN from a highly pathogenic H7N7 influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Netherlands/219/2003(H7N7))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2012-02-01
Authors: Yang, H., Carney, P.J., Donis, R.O., Stevens, J.
PDB entry 4dj8: Structure of the hemagglutinin complexed with 6SLN from a highly pathogenic H7N7 influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Netherlands/219/2003(H7N7))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-02-01
Authors: Yang, H., Carney, P.J., Donis, R.O., Stevens, J.
PDB entry 4dj9: Human vinculin head domain Vh1 (residues 1-258) in complex with the talin vinculin binding site 50 (VBS50, residues 2078-2099)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-02-01
Authors: Yogesha, S.D., Rangarajan, E.S., Vonrhein, C., Bricogne, G., Izard, T.
PDB entry 4dja: Crystal structure of a prokaryotic (6-4) photolyase PhrB from Agrobacterium Tumefaciens with an Fe-S cluster and a 6,7-dimethyl-8-ribityllumazine antenna chromophore at 1.45A resolution
Classification: LYASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2012-02-01
Authors: Scheerer, P., Zhang, F., Oberpichler, I., Lamparter, T., Krauss, N.
PDB entry 4djb: A Structural Basis for the Assembly and Functions of a Viral Polymer that Inactivates Multiple Tumor Suppressors
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.053 Å
Deposited: 2012-02-01
Authors: Ou, H.D., Kwiatkowski, W., Deerinck, T.J., Noske, A., Blain, K.Y., Land, H.S., Soria, C., Powers, C.J., May, A.P., Shu, X., Tsien, R.Y., Fitzpatrick, J.A.J., Long, J.A., Ellisman, M.H., Choe, S., O'Shea, C.C.
PDB entry 4djc: 1.35 A crystal structure of the NaV1.5 DIII-IV-Ca/CaM complex
Classification: calcium-binding protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2012-02-01
Authors: Sarhan, M.F., Tung, C.-C., Van Petegem, F., Ahern, C.A.
PDB entry 4djd: Crystal structure of folate-free corrinoid iron-sulfur protein (CFeSP) in complex with its methyltransferase (MeTr)
Classification: TRANSFERASE/VITAMIN-BINDING PROTEIN
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2012-02-01
Authors: Kung, Y., Doukov, T.I., Blasiak, L.C., Drennan, C.L.
PDB entry 4dje: Crystal structure of folate-bound corrinoid iron-sulfur protein (CFeSP) in complex with its methyltransferase (MeTr), co-crystallized with folate
Classification: TRANSFERASE/VITAMIN-BINDING PROTEIN
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 3.504 Å
Deposited: 2012-02-01
Authors: Kung, Y., Drennan, C.L.
PDB entry 4djf: Crystal structure of folate-bound corrinoid iron-sulfur protein (CFeSP) in complex with its methyltransferase (MeTr), co-crystallized with folate and Ti(III) citrate reductant
Classification: TRANSFERASE/VITAMIN-BINDING PROTEIN
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2012-02-01
Authors: Kung, Y., Drennan, C.L.
PDB entry 4djg: Crystal structure of the coiled-coil 1 domain of actin-binding protein SCAB1
Classification: PROTEIN BINDING
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-02-01
Authors: Zhang, W., Ye, K.
PDB entry 4djh: Structure of the human kappa opioid receptor in complex with JDTic
Classification: Hormone receptor/antagonist
Source organism: Enterobacteria phage T4; Homo Sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2012-02-01
Authors: Wu, H., Wacker, D., Katritch, V., Mileni, M., Han, G.W., Vardy, E., Liu, W., Thompson, A.A., Huang, X.P., Carroll, F.I., Mascarella, S.W., Westkaemper, R.B., Mosier, P.D., Roth, B.L., Cherezov, V., Stevens, R.C., GPCR Network (GPCR)
PDB entry 4dji: Structure of glutamate-GABA antiporter GadC
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.187 Å
Deposited: 2012-02-02
Authors: Ma, D., Lu, P.L., Yan, C.Y., Fan, C., Yin, P., Wang, J.W., Shi, Y.G.
PDB entry 4djj: Crystal structure of the complex of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with Pimelic acid at 2.9 Angstrom resolution
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2012-02-02
Authors: Kumar, A., Singh, A., Singh, N., Sinha, M., Sharma, S., Arora, A., Singh, T.P.
PDB entry 4djk: Structure of glutamate-GABA antiporter GadC
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.097 Å
Deposited: 2012-02-02
Authors: Ma, D., Lu, P.L., Yan, C.Y., Fan, C., Yin, P., Wang, J.W., Shi, Y.G.
PDB entry 4djl: Carboxypeptidase T with N-sulfamoyl-L-phenylalanine
Classification: HYDROLASE
Source organism: Thermoactinomyces vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2012-02-02
Authors: Kuznetsov, S.A., Timofeev, V.I., Akparov, V.K., Kuranova, I.P.
PDB entry 4djm: Crystal structure of the E. coli chaperone DraB
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2012-02-02
Authors: Dauter, Z., Piatek, R., Dauter, M., Brzuszkiewicz, A.
PDB entry 4djn: Crystal structure of a ribonucleotide reductase M2 B (RNRR2) from Homo sapiens at 2.20 A resolution
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-02-02
Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
PDB entry 4djo: Crystal Structure of wild-type HIV-1 Protease in Complex with MKP56
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2012-02-02
Authors: Schiffer, C.A., Nalam, M.N.L.
PDB entry 4djp: Crystal Structure of wild-type HIV-1 Protease in Complex with MKP73
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2012-02-02
Authors: Schiffer, C.A., Nalam, M.N.L.
PDB entry 4djq: Crystal Structure of wild-type HIV-1 Protease in Complex with MKP86
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2012-02-02
Authors: Schiffer, C.A., Nalam, M.N.L.
PDB entry 4djr: Crystal Structure of wild-type HIV-1 Protease in Complex with MKP97
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2012-02-02
Authors: Schiffer, C.A., Nalam, M.N.L.
PDB entry 4djs: Structure of beta-catenin in complex with a stapled peptide inhibitor
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.029 Å
Deposited: 2012-02-02
Authors: Bowman, B.R., Grossmann, T.N., Yeh, J.T.-H., Verdine, G.L.
PDB entry 4djt: Crystal structure of a nuclear GTP-binding protein from Encephalitozoon cuniculi bound to GDP-Mg2+
Classification: NUCLEAR PROTEIN
Source organism: Encephalitozoon cuniculi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-02
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4dju: Structure of BACE Bound to 2-imino-3-methyl-5,5-diphenylimidazolidin-4-one
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-02
Authors: Strickland, C., Cumming, J.
PDB entry 4djv: Structure of BACE Bound to 2-imino-5-(3'-methoxy-[1,1'-biphenyl]-3-yl)-3-methyl-5-phenylimidazolidin-4-one
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2012-02-02
Authors: Strickland, C., Cumming, J.
PDB entry 4djw: Structure of BACE Bound to 2-imino-3-methyl-5-phenyl-5-(3-(pyridin-3-yl)phenyl)imidazolidin-4-one
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-02-02
Authors: Strickland, C., Cumming, J.
PDB entry 4djx: Structure of BACE Bound to 5-(3-(5-chloropyridin-3-yl)phenyl)-5-cyclopropyl-2-imino-3-methylimidazolidin-4-one
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-02-02
Authors: Strickland, C., Cumming, J.
PDB entry 4djy: Structure of BACE Bound to (R)-5-cyclopropyl-2-imino-3-methyl-5-(3-(5-(prop-1-yn-1-yl)pyridin-3-yl)phenyl)imidazolidin-4-one
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2012-02-02
Authors: Strickland, C., Cumming, J.
PDB entry 4djz: Catalytic fragment of masp-1 in complex with its specific inhibitor developed by directed evolution on sgci scaffold
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; Schistocerca gregaria
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2012-02-03
Authors: Heja, D., Harmat, V., Fodor, K., Wilmanns, M., Dobo, J., Kekesi, K.A., Zavodszky, P., Gal, P., Pal, G.
PDB entry 4dk0: Crystal structure of MacA from Actinobacillus actinomycetemcomitans
Classification: MEMBRANE PROTEIN
Source organism: Aggregatibacter actinomycetemcomitans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2012-02-03
Authors: Xu, Y., Piao, S., Ha, N.C.
PDB entry 4dk1: Crystal Structure of MacA-MexA chimeric protein, containing the Pseudomonas aeruginosa MexA alpha-hairpin domain.
Classification: MEMBRANE PROTEIN
Source organism: Aggregatibacter actinomycetemcomitans; Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.499 Å
Deposited: 2012-02-03
Authors: Xu, Y., Ha, N.C.
PDB entry 4dk2: Crystal Structure of Open Trypanosoma brucei dUTPase
Classification: HYDROLASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2012-02-03
Authors: Hemsworth, G.R., Gonzalez-Pacanowska, D., Wilson, K.S.
PDB entry 4dk3: Structure of Editosome protein
Classification: RNA BINDING PROTEIN/IMMUNE SYSTEM
Source organism: Lama glama; Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2012-02-03
Authors: Park, Y.-J., Hol, W.
PDB entry 4dk4: Crystal Structure of Trypanosoma brucei dUTPase with dUpNp, Ca2+ and Na+
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-02-03
Authors: Hemsworth, G.R., Gonzalez-Pacanowska, D., Wilson, K.S.
PDB entry 4dk5: Crystal structure of human PI3K-gamma in complex with a pyridyl-triazine inhibitor
Classification: Transferase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2012-02-03
Authors: Whittington, D.A., Tang, J., Yakowec, P.
PDB entry 4dk6: Structure of Editosome protein
Classification: RNA BINDING PROTEIN/IMMUNE SYSTEM
Source organism: Lama glama; Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2012-02-03
Authors: Park, Y.-J., Hol, W.
PDB entry 4dk7: Crystal structure of LXR ligand binding domain in complex with full agonist 1
Classification: TRANSCRIPTION/Peptide/Agonist
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2012-02-03
Authors: Piper, D.E., Xu, H.
PDB entry 4dk8: Crystal structure of LXR ligand binding domain in complex with partial agonist 5
Classification: TRANSCRIPTION/Peptide/Agonist
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2012-02-03
Authors: Piper, D.E., Kopecky, D.J., Xu, H.
PDB entry 4dk9: Crystal Structure of MBD4 Catalytic Domain Bound to Abasic DNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2012-02-03
Authors: Manvilla, B.A., Toth, E.A., Drohat, A.C.
PDB entry 4dka: Structure of Editosome protein
Classification: RNA BINDING PROTEIN/IMMUNE SYSTEM
Source organism: Lama glama; Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2012-02-03
Authors: Park, Y.-J., Hol, W.
PDB entry 4dkb: Crystal Structure of Trypanosoma brucei dUTPase with dUpNp and Ca2+
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.831 Å
Deposited: 2012-02-03
Authors: Hemsworth, G.R., Gonzalez-Pacanowska, D., Wilson, K.S.
PDB entry 4dkc: Crystal Structure of Human Interleukin-34
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-02-03
Authors: Ma, X., Bazan, J.F., Starovasnik, M.A.
PDB entry 4dkd: Crystal Structure of Human Interleukin-34 Bound to Human CSF-1R
Classification: CYTOKINE/TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-02-03
Authors: Ma, X., Bazan, J.F., Starovasnik, M.A.
PDB entry 4dke: Crystal Structure of Human Interleukin-34 Bound to FAb1.1
Classification: CYTOKINE/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-02-03
Authors: Ma, X., Chen, Y., Stawicki, S., Wu, Y., Bazan, J.F., Starovasnik, M.A.
PDB entry 4dkf: Crystal Structure of Human Interleukin-34 Bound to FAb2
Classification: CYTOKINE/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2012-02-03
Authors: Ma, X., Chen, Y., Stawicki, S., Wu, Y., Bazan, J.F., Starovasnik, M.A.
PDB entry 4dki: Structural Insights into the Anti- Methicillin-Resistant Staphylococcus aureus (MRSA) Activity of Ceftobiprole
Classification: HYDROLASE/Antibiotic
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2012-02-03
Authors: Lovering, A.L., Gretes, M.C., Strynadka, N.C.J.
PDB entry 4dkj: CpG specific methyltransferase in complex with target DNA
Classification: TRANSFERASE/DNA
Source organism: Mycoplasma penetrans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2012-02-03
Authors: Wojciechowski, M., Czapinska, H., Bochtler, M.
PDB entry 4dkk: The X-ray Crystal Structure of the Human STAU1 SSM-'RBD'5 Domain-Swapped Dimer
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2012-02-03
Authors: Gleghorn, M.L.
PDB entry 4dkl: Crystal structure of the mu-opioid receptor bound to a morphinan antagonist
Classification: SIGNALING PROTEIN/ANTAGONIST
Source organism: Enterobacteria phage T4; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-02-03
Authors: Manglik, A., Kruse, A.C., Kobilka, T.S., Thian, F.S., Mathiesen, J.M., Sunahara, R.K., Pardo, L., Weis, W.I., Kobilka, B.K., Granier, S.
PDB entry 4dkm: Crystal Structure of Amphioxus GFPc1a
Classification: FLUORESCENT PROTEIN
Source organism: Branchiostoma floridae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-02-03
Authors: Deheyn, D.D., Bomati, E.K.
PDB entry 4dkn: Crystal structure of amphioxus green fluorescent protein, GFPA1
Classification: FLUORESCENT PROTEIN
Source organism: Branchiostoma floridae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2012-02-03
Authors: Bomati, E.K., Deheyn, D.D.
PDB entry 4dko: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with TS-II-224
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.981 Å
Deposited: 2012-02-03
Authors: Kwon, Y.D., LaLonde, J.M., Jones, D.M., Sun, A.W., Courter, J.R., Soeta, T., Kobayashi, T., Princiotto, A.M., Wu, X., Mascola, J., Schon, A., Freire, E., Sodroski, J., Madani, N., Smith III, A.B., Kwong, P.D.
PDB entry 4dkp: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AWS-I-50
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7978 Å
Deposited: 2012-02-03
Authors: Kwon, Y.D., LaLonde, J.M., Jones, D.M., Sun, A.W., Courter, J.R., Soeta, T., Kobayashi, T., Princiotto, A.M., Wu, X., Mascola, J., Schon, A., Freire, E., Sodroski, J., Madani, N., Smith III, A.B., Kwong, P.D.
PDB entry 4dkq: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with DMJ-I-228
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.888 Å
Deposited: 2012-02-03
Authors: Kwon, Y.D., LaLonde, J.M., Jones, D.M., Sun, A.W., Courter, J.R., Soeta, T., Kobayashi, T., Princiotto, A.M., Wu, X., Mascola, J., Schon, A., Freire, E., Sodroski, J., Madani, N., Smith III, A.B., Kwong, P.D.
PDB entry 4dkr: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AWS-I-169
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-03
Authors: Kwon, Y.D., LaLonde, J.M., Jones, D.M., Sun, A.W., Courter, J.R., Soeta, T., Kobayashi, T., Princiotto, A.M., Wu, X., Mascola, J., Schon, A., Freire, E., Sodroski, J., Madani, N., Smith III, A.B., Kwong, P.D.
PDB entry 4dks: A spindle-shaped virus protein (chymotrypsin treated)
Classification: RECOMBINATION
Source organism: Sulfolobus virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-02-04
Authors: Ouyang, S., Liang, W., Huang, L., Liu, Z.-J.
PDB entry 4dkt: Crystal structure of human peptidylarginine deiminase 4 in complex with N-acetyl-L-threonyl-L-alpha-aspartyl-N5-[(1E)-2-fluoroethanimidoyl]-L-ornithinamide
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2012-02-04
Authors: Jones, J.E., Slack, J.L., Fang, P., Zhang, X., Subramanian, V., Causey, C.P., Coonrod, S.A., Guo, M., Thompson, P.R.
PDB entry 4dku: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-09027
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4902 Å
Deposited: 2012-02-04
Authors: Kwon, Y.D., Debnath, A.K., Kwong, P.D.
PDB entry 4dkv: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-10007
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1847 Å
Deposited: 2012-02-04
Authors: Kwon, Y.D., Debnath, A.K., Kwong, P.D.
PDB entry 4dkw: Structure of P22 Large terminase nuclease domain
Classification: HYDROLASE
Source organism: Enterobacteria phage P22
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2012-02-04
Authors: Roy, A., Cingolani, G.
PDB entry 4dkx: Crystal Structure of the Rab 6A'(Q72L)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-02-04
Authors: Park, H.H., Shin, Y.-C.
PDB entry 4dky: Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra]
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Ra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.478 Å
Deposited: 2012-02-05
Authors: Bhowmick, T., Ramagopal, U.A., Ghosh, S., Nagaraja, V., Ramakumar, S.
PDB entry 4dkz: Hairpin structure of a DNA dodecamer containing North-methanocarba-2'-deoxythymidine
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-05
Authors: Egli, M., Pallan, P.S.
PDB entry 4dl0: Crystal Structure of the heterotrimeric EGChead Peripheral Stalk Complex of the Yeast Vacuolar ATPase
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.905 Å
Deposited: 2012-02-05
Authors: Oot, R.A., Huang, L.S., Berry, E.A., Wilkens, S.
PDB entry 4dl1: Crystal Structure of human Myeloperoxidase with covalent thioxanthine analog
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-05
Authors: Vajdos, F., Varghese, A.
PDB entry 4dl2: Human DNA polymerase eta inserting dCMPNPP opposite CG template (GG0a)
Classification: TRANSFERASE/DNA/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2012-02-05
Authors: Zhao, Y., Biertumpfel, C., Gregory, M., Hua, Y., Hanaoka, F., Yang, W.
PDB entry 4dl3: Human DNA polymerase eta inserting dCMPNPP opposite GG template (GG0b).
Classification: TRANSFERASE/DNA/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-02-05
Authors: Zhao, Y., Biertumpfel, C., Gregory, M., Hua, Y., Hanaoka, F., Yang, W.
PDB entry 4dl4: Human DNA polymerase eta inserting dCMPNPP opposite the 3'G of cisplatin crosslinked Gs (Pt-GG1).
Classification: TRANSFERASE/DNA/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-05
Authors: Zhao, Y., Biertumpfel, C., Gregory, M., Hua, Y.-J., Hanaoka, F., Yang, W.
PDB entry 4dl5: Human DNA polymerase eta inserting dCMPNPP opposite the 5'G of cisplatin crosslinked Gs (Pt-GG2).
Classification: TRANSFERASE/DNA/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2012-02-05
Authors: Zhao, Y., Biertumpfel, C., Gregory, M., Hanaoka, F., Hua, Y., Yang, W.
PDB entry 4dl6: Human DNA polymerase eta extending primer immediately after cisplatin crosslink (Pt-GG3).
Classification: TRANSFERASE/DNA/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-02-05
Authors: Zhao, Y., Biertumpfel, C., Gregory, M., Hua, Y., Hanaoka, F., Yang, W.
PDB entry 4dl7: Human DNA polymerase eta fails to extend primer 2 nucleotide after cisplatin crosslink (Pt-GG4).
Classification: TRANSFERASE/DNA/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2012-02-05
Authors: Zhao, Y., Biertumpfel, C., Gregory, M., Hua, Y., Hanaoka, F., Yang, W.
PDB entry 4dl8: Crystal structure of Trypanosoma brucei dUTPase with dUMP, planar [AlF3-OPO3] transition state analogue, Mg2+, and Na+
Classification: HYDROLASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2012-02-06
Authors: Hemsworth, G.R., Gonzalez-Pacanowska, D., Wilson, K.S.
PDB entry 4dl9: Crystal structure of S-nitrosoglutathione reductase from tomato (Solanum lycopersicum) in complex with NAD+
Classification: OXIDOREDUCTASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-02-06
Authors: Kopecny, D., Tylichova, M., Briozzo, P.
PDB entry 4dla: Crystal structure of S-nitrosoglutathione reductase apoenzyme from tomato (Solanum lycopersicum)
Classification: OXIDOREDUCTASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2012-02-06
Authors: Kopecny, D., Tylichova, M., Briozzo, P.
PDB entry 4dlb: Structure of S-nitrosoglutathione reductase from tomato (Solanum lycopersicum) crystallized in presence of NADH and glutathione
Classification: OXIDOREDUCTASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-02-06
Authors: Kopecny, D., Tylichova, M., Briozzo, P.
PDB entry 4dlc: Crystal Structure of Trypanosoma brucei dUTPase with dUMP, MgF3- transition state analogue, and Mg2+
Classification: HYDROLASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.759 Å
Deposited: 2012-02-06
Authors: Hemsworth, G.R., Gonzalez-Pacanowska, D., Wilson, K.S.
PDB entry 4dld: Crystal structure of the GluK1 ligand-binding domain (S1S2) in complex with the antagonist (S)-2-amino-3-(2-(2-carboxyethyl)-5-chloro-4-nitrophenyl)propionic acid at 2.0 A resolution
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-06
Authors: Venskutonyte, R., Frydenvang, K., Kastrup, J.S.
PDB entry 4dle: Ternary Structure of the large Fragment of Taq DNA Polymerase: 4-Fluoroproline Variant
Classification: Transferase/DNA
Source organism: Thermus aquaticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2012-02-06
Authors: Holzberger, B., Obeid, S., Welte, W., Diederichs, K., Marx, A.
PDB entry 4dlf: Crystal structure of an amidohydrolase (COG3618) from burkholderia multivorans (TARGET EFI-500235) with bound ZN, space group P3221
Classification: HYDROLASE
Source organism: Burkholderia multivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.925 Å
Deposited: 2012-02-06
Authors: Vetting, M.W., Toro, R., Bhosle, R., Seidel, R.D., Hillerich, B., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Al Obaidi, N.F., Zencheck, W.D., Imker, H.J., Gerlt, J.A., Raushel, F.M., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4dlg: Ternary Structure of the large Fragment of Taq DNA polymerase
Classification: Transferase/DNA
Source organism: Thermus aquaticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2012-02-06
Authors: Marx, A., Diederichs, K., Obeid, S., Holzberger, B.
PDB entry 4dlh: Crystal Structure of the protein Q9HRE7 from Halobacterium salinarium at the resolution 1.9A, Northeast Structural Genomics Consortium (NESG) Target HsR50
Classification: Structural Genomics, Unknown Function
Source organism: Halobacterium sp. NRC-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-02-06
Authors: Kuzin, A., Chen, Y., Seetharaman, J., Mao, M., Xiao, R., Ciccosanti, C., Zhao, L., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 4dli: Human p38 MAP kinase in complex with RL87
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2012-02-06
Authors: Gruetter, C., Getlik, M., Simard, J.R., Rauh, D.
PDB entry 4dlj: Human p38 MAP kinase in complex with RL163
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-02-06
Authors: Gruetter, C., Termathe, M.
PDB entry 4dlk: Crystal Structure of ATP-Ca++ complex of purK: N5-carboxyaminoimidazole ribonucleotide synthetase
Classification: LYASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2012-02-06
Authors: Fung, L.W., Tuntland, M.L., Santarsiero, B.D., Johnson, M.E.
PDB entry 4dll: Crystal structure of a 2-hydroxy-3-oxopropionate reductase from Polaromonas sp. JS666
Classification: OXIDOREDUCTASE
Source organism: Polaromonas sp. JS666
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2012-02-06
Authors: Agarwal, R., Chamala, S., Evans, B., Foti, R., Gizzi, A., Hillerich, B., Kar, A., Lafleur, J., Seidel, R., Villigas, G., Zencheck, W., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4dlm: Crystal structure of an amidohydrolase (COG3618) from burkholderia multivorans (TARGET EFI-500235) with bound ZN, space group P212121
Classification: HYDROLASE
Source organism: Burkholderia multivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.925 Å
Deposited: 2012-02-06
Authors: Vetting, M.W., Toro, R., Bhosle, R., Seidel, R.D., Hillerich, B., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Al Obaidi, N.F., Zencheck, W.D., Imker, H.J., Gerlt, J.A., Raushel, F.M., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4dln: Crystal structure of the CFTR inhibitory factor Cif with the D129S mutation
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2012-02-06
Authors: Bahl, C.D., Amacher, J.F., Madden, D.R.
PDB entry 4dlo: Crystal structure of the GAIN and HormR domains of brain angiogenesis inhibitor 3 (BAI3)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-02-06
Authors: Arac, D., Boucard, A.A., Bolliger, M.F., Nguyen, J., Soltis, M., Sudhof, T.C., Brunger, A.T.
PDB entry 4dlp: Crystal structure of methionyl-tRNA synthetase MetRS from Brucella melitensis bound to selenomethionine
Classification: LIGASE
Source organism: Brucella melitensis biovar Abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2012-02-06
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4dlq: Crystal structure of the GAIN and HormR domains of CIRL 1/Latrophilin 1 (CL1)
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-02-06
Authors: Arac, D., Boucard, A.A., Bolliger, M.F., Nguyen, J., Soltis, M., Sudhof, T.C., Brunger, A.T.
PDB entry 4dlr: H-Ras PEG 400/Ca(OAc)2, ordered off
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.319 Å
Deposited: 2012-02-06
Authors: Holzapfel, G., Mattos, C.
PDB entry 4dls: H-Ras Set 1 CaCl2 'Mixed'
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.819 Å
Deposited: 2012-02-06
Authors: Holzapfel, G., Mattos, C.