LiteFold/PDB huggingface dataset:
PDB entry 3w23: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-3-131
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2012-11-26
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w24: The high-resolution crystal structure of TsXylA, intracellular xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2012-11-27
Authors: Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.
PDB entry 3w25: The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylobiose
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2012-11-27
Authors: Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.
PDB entry 3w26: The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E146A mutant with xylotriose
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-11-27
Authors: Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.
PDB entry 3w27: The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylobiose
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2012-11-27
Authors: Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.
PDB entry 3w28: The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotriose
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2012-11-27
Authors: Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.
PDB entry 3w29: The high-resolution crystal structure of TsXylA, intracellular xylanase from /Thermoanaerobacterium saccharolyticum JW/SL-YS485/: the complex of the E251A mutant with xylotetraose
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2012-11-27
Authors: Han, X., Gao, J., Shang, N., Huang, C.-H., Ko, T.-P., Zhu, Z., Wiegel, J., Shao, W., Guo, R.-T.
PDB entry 3w2a: Crystal structure of VirB core domain complexed with the cis-acting site upstream icsp promoter
Classification: TRANSCRIPTION/DNA
Source organism: Shigella flexneri 2a; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.775 Å
Deposited: 2012-11-27
Authors: Gao, X.P., Waltersperger, S., Wang, M.T., Cui, S.
PDB entry 3w2c: Structure of Aurora kinase A complexed to benzoimidazole-indazole inhibitor XV
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2012-11-28
Authors: Oliveira, T.M., Kairies, N.A., Engh, R.A.
PDB entry 3w2d: Crystal Structure of Staphylococcal Eenterotoxin B in complex with a novel neutralization monoclonal antibody Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2012-11-28
Authors: Liang, S.Y., Hu, S., Dai, J.X., Guo, Y.J., Lou, Z.Y.
PDB entry 3w2e: Crystal structure of oxidation intermediate (20 min) of NADH-cytochrome b5 reductase from pig liver
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-11-28
Authors: Yamada, M., Tamada, T., Matsumoto, F., Shoyama, Y., Kimura, S., Kuroki, R., Miki, K.
PDB entry 3w2f: Crystal structure of oxidation intermediate (10 min) of NADH-cytochrome b5 reductase from pig liver
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2012-11-28
Authors: Yamada, M., Tamada, T., Matsumoto, F., Shoyama, Y., Kimura, S., Kuroki, R., Miki, K.
PDB entry 3w2g: Crystal structure of fully reduced form of NADH-cytochrome b5 reductase from pig liver
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2012-11-28
Authors: Yamada, M., Tamada, T., Matsumoto, F., Shoyama, Y., Kimura, S., Kuroki, R., Miki, K.
PDB entry 3w2h: Crystal structure of oxidation intermediate (1min) of NADH-cytochrome b5 reductase from pig liver
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.752 Å
Deposited: 2012-11-28
Authors: Yamada, M., Tamada, T., Matsumoto, F., Shoyama, Y., Kimura, S., Kuroki, R., Miki, K.
PDB entry 3w2i: Crystal structure of re-oxidized form (60 min) of NADH-cytochrome b5 reductase from pig liver
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2012-11-28
Authors: Yamada, M., Tamada, T., Matsumoto, F., Shoyama, Y., Kimura, S., Kuroki, R., Miki, K.
PDB entry 3w2j: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-3-135
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2012-11-28
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w2k: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-3-165
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2012-11-29
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w2l: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-3-169
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2012-11-29
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w2m: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-3-183
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2012-11-30
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w2n: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-3-185
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2012-12-03
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w2o: EGFR Kinase domain T790M/L858R Mutant with TAK-285
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-12-03
Authors: Sogabe, S., Kawakita, Y., Igaki, S.
PDB entry 3w2p: EGFR Kinase domain T790M/L858R mutant with compound 2
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2012-12-03
Authors: Sogabe, S., Kawakita, Y., Igaki, S.
PDB entry 3w2q: EGFR kinase domain T790M/L858R mutant with HKI-272
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-12-03
Authors: Sogabe, S., Kawakita, Y., Igaki, S.
PDB entry 3w2r: EGFR Kinase domain T790M/L858R mutant with compound 4
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2012-12-03
Authors: Sogabe, S., Kawakita, Y., Igaki, S.
PDB entry 3w2s: EGFR kinase domain with compound4
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-12-03
Authors: Sogabe, S., Kawakita, Y., Igaki, S.
PDB entry 3w2t: Crystal structure of human depiptidyl peptidase IV (DPP-4) in complex with vildagliptin
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2012-12-04
Authors: Kishida, H., Nabeno, M., Miyaguchi, I., Tanaka, Y., Katou, R., Akahoshi, F.
PDB entry 3w2u: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-3-193
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-12-05
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w2v: Crystal structure of the Cmr2dHD-Cmr3 subcomplex bound to 3'-AMP
Classification: IMMUNE SYSTEM
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-12-06
Authors: Numata, T., Osawa, T.
PDB entry 3w2w: Crystal structure of the Cmr2dHD-Cmr3 subcomplex bound to ATP
Classification: IMMUNE SYSTEM
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-12-06
Authors: Numata, T., Osawa, T.
PDB entry 3w2x: Crystal structure of DNA uridine endonuclease Mth212
Classification: HYDROLASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-12-06
Authors: Tabata, N., Shida, T., Arai, R.
PDB entry 3w2y: Crystal structure of DNA uridine endonuclease Mth212 mutant W205S
Classification: HYDROLASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-12-06
Authors: Tabata, N., Shida, T., Arai, R.
PDB entry 3w2z: Crystal structure of the cyanobacterial protein
Classification: SIGNALING PROTEIN
Source organism: Nostoc
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-12-06
Authors: Narikawa, R., Muraki, N., Shiba, T., Kurisu, G., Ikeuchi, M.
PDB entry 3w30: Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
Classification: IMMUNE SYSTEM
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2012-12-07
Authors: Nishide, A., Kim, M., Takagi, K., Sasakawa, C., Mizushima, T.
PDB entry 3w31: Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2012-12-07
Authors: Nishide, A., Kim, M., Takagi, K., Sasakawa, C., Mizushima, T.
PDB entry 3w32: EGFR kinase domain complexed with compound 20a
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-12-07
Authors: Sogabe, S., Kawakita, Y.
PDB entry 3w33: EGFR kinase domain complexed with compound 19b
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-12-07
Authors: Sogabe, S., Kawakita, Y.
PDB entry 3w34: Ternary complex of Thermus thermophilus HB8 uridine-cytidine kinase with substrates
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2012-12-10
Authors: Tomoike, F., Nakagawa, N., Masui, R., Kuramitsu, S.
PDB entry 3w35: Crystal structure of apo-type bacterial Vanadium-dependent chloroperoxidase
Classification: OXIDOREDUCTASE
Source organism: Streptomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-12-11
Authors: Liscombe, D.K., Miyanaga, A., Fielding, E., Bernhardt, P., Li, A., Winter, J.M., Gilson, M.K., Noel, J.P., Moore, B.S.
PDB entry 3w36: Crystal structure of holo-type bacterial Vanadium-dependent chloroperoxidase
Classification: OXIDOREDUCTASE
Source organism: Streptomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2012-12-11
Authors: Liscombe, D.K., Miyanaga, A., Fielding, E., Bernhardt, P., Li, A., Winter, J.M., Gilson, M.K., Noel, J.P., Moore, B.S.
PDB entry 3w37: Sugar beet alpha-glucosidase with acarbose
Classification: HYDROLASE, CARBOHYDRATE
Source organism: Beta vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-12-13
Authors: Tagami, T., Yamashita, K., Okuyama, M., Mori, H., Yao, M., Kimura, A.
PDB entry 3w38: Sugar beet alpha-glucosidase
Classification: HYDROLASE, CARBOHYDRATE
Source organism: Beta vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2012-12-13
Authors: Tagami, T., Yamashita, K., Okuyama, M., Mori, H., Yao, M., Kimura, A.
PDB entry 3w39: Crystal structure of HLA-B*5201 in complexed with HIV immunodominant epitope (TAFTIPSI)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2012-12-13
Authors: Yagita, Y., Kuse, N., Kuroki, K., Gatanaga, H., Carlson, J.M., Chikata, T., Brumme, Z.L., Murakoshi, H., Akahoshi, T., Pfeifer, N., Mallal, S., John, M., Ose, T., Matsubara, H., Kanda, R., Fukunaga, Y., Honda, K., Kawashima, Y., Ariumi, Y., Oka, S., Maenaka, K., Takiguchi, M.
PDB entry 3w3a: Crystal structure of V1-ATPase at 3.9 angstrom resolution
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2012-12-14
Authors: Nagamatsu, Y., Takeda, K., Kuranaga, T., Numoto, N., Miki, K.
PDB entry 3w3b: Crystal structure of wild-type human transthyretin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-12-19
Authors: Lima, L.M.T.R.
PDB entry 3w3c: Crystal structure of VirB core domain complexed with the cis-acting site upstream icsb promoter
Classification: TRANSCRIPTION/DNA
Source organism: Shigella flexneri 2a; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.431 Å
Deposited: 2012-12-19
Authors: Gao, X.P., Waltersperger, S., Wang, M.T., Cui, S.
PDB entry 3w3d: Crystal structure of smooth muscle G actin DNase I complex
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-12-20
Authors: Sakabe, N., Sakabe, K., Sasaki, K., Kondo, H., Shimomur, M.
PDB entry 3w3e: Structure of Vigna unguiculata chitinase with regulation activity of the plant cell wall
Classification: HYDROLASE
Source organism: Vigna unguiculata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-12-20
Authors: Morohashi, K., Sasaki, K., Sakabe, N., Sakabe, K.
PDB entry 3w3g: Crystal structure of human TLR8 (unliganded form)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-12-21
Authors: Tanji, H., Ohto, U., Shimizu, T.
PDB entry 3w3j: Crystal structure of human TLR8 in complex with CL097
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-12-22
Authors: Tanji, H., Ohto, U., Shimizu, T.
PDB entry 3w3k: Crystal structure of human TLR8 in complex with CL075
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-12-22
Authors: Tanji, H., Ohto, U., Shimizu, T.
PDB entry 3w3l: Crystal structure of human TLR8 in complex with Resiquimod (R848) crystal form 1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2012-12-22
Authors: Tanji, H., Ohto, U., Shimizu, T.
PDB entry 3w3m: Crystal structure of human TLR8 in complex with Resiquimod (R848) crystal form 2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-12-22
Authors: Tanji, H., Ohto, U., Shimizu, T.
PDB entry 3w3n: Crystal structure of human TLR8 in complex with Resiquimod (R848) crystal form 3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-12-22
Authors: Tanji, H., Ohto, U., Shimizu, T.
PDB entry 3w3o: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-053
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2012-12-27
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Shiba, T., Sakamoto, K., Suzuki, S., Rocha, J.R., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w3s: Crystal structure of A. aeolicus tRNASec in complex with M. kandleri SerRS
Classification: LIGASE/RNA
Source organism: Methanopyrus kandleri; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.095 Å
Deposited: 2012-12-27
Authors: Itoh, Y., Sekine, S., Yokoyama, S.
PDB entry 3w3t: Crystal structure of Kap121p
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2012-12-28
Authors: Kobayashi, J., Matsuura, Y.
PDB entry 3w3u: Crystal structure of Kap121p mutant R349A/Q350A/D353A/E396A/N430K/D438A/N477A
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-12-28
Authors: Kobayashi, J., Matsuura, Y.
PDB entry 3w3v: Crystal structure of Kap121p mutant D353K/E396K/D438K
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2012-12-28
Authors: Kobayashi, J., Matsuura, Y.
PDB entry 3w3w: Crystal structure of Kap121p bound to Ste12p
Classification: PROTEIN TRANSPORT/DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-12-28
Authors: Kobayashi, J., Matsuura, Y.
PDB entry 3w3x: Crystal structure of Kap121p bound to Pho4p
Classification: PROTEIN TRANSPORT/TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2012-12-28
Authors: Kobayashi, J., Matsuura, Y.
PDB entry 3w3y: Crystal structure of Kap121p bound to Nup53p
Classification: PROTEIN TRANSPORT/DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-12-28
Authors: Kobayashi, J., Matsuura, Y.
PDB entry 3w3z: Crystal structure of Kap121p bound to RanGTP
Classification: PROTEIN TRANSPORT/NUCLEAR PROTEIN
Source organism: Canis lupus familiaris; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-12-28
Authors: Kobayashi, J., Matsuura, Y.
PDB entry 3w40: Crystal structure of RsbX in complex with magnesium in space group P1
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-01-04
Authors: Teh, A.H., Makino, M., Baba, S., Shimizu, N., Yamamoto, M., Kumasaka, T.
PDB entry 3w41: Crystal structure of RsbX in complex with magnesium in space group P21
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2013-01-04
Authors: Teh, A.H., Makino, M., Baba, S., Shimizu, N., Yamamoto, M., Kumasaka, T.
PDB entry 3w42: Crystal structure of RsbX in complex with manganese in space group P1
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2013-01-04
Authors: Teh, A.H., Makino, M., Baba, S., Shimizu, N., Yamamoto, M., Kumasaka, T.
PDB entry 3w43: Crystal structure of RsbX in complex with manganese in space group P21
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2013-01-04
Authors: Teh, A.H., Makino, M., Baba, S., Shimizu, N., Yamamoto, M., Kumasaka, T.
PDB entry 3w44: Crystal structure of RsbX, selenomethionine derivative
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-01-04
Authors: Teh, A.H., Makino, M., Baba, S., Shimizu, N., Yamamoto, M., Kumasaka, T.
PDB entry 3w45: Crystal structure of RsbX in complex with cobalt in space group P1
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-01-04
Authors: Makino, M., Teh, A.H., Baba, S., Shimizu, N., Yamamoto, M., Kumasaka, T.
PDB entry 3w4i: Crystal Structure of human DAAO in complex with coumpound 8
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-01-09
Authors: Hondo, T., Warizaya, M., Niimi, T., Namatame, I., Yamaguchi, T., Nakanishi, K., Hamajima, T., Harada, K., Sakashita, H., Matsumoto, Y., Orita, M., Watanabe, T., Takeuchi, M.
PDB entry 3w4j: Crystal Structure of human DAAO in complex with coumpound 12
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2013-01-09
Authors: Hondo, T., Warizaya, M., Niimi, T., Namatame, I., Yamaguchi, T., Nakanishi, K., Hamajima, T., Harada, K., Sakashita, H., Matsumoto, Y., Orita, M., Watanabe, T., Takeuchi, M.
PDB entry 3w4k: Crystal Structure of human DAAO in complex with coumpound 13
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2013-01-09
Authors: Hondo, T., Warizaya, M., Niimi, T., Namatame, I., Yamaguchi, T., Nakanishi, K., Hamajima, T., Harada, K., Sakashita, H., Matsumoto, Y., Orita, M., Watanabe, T., Takeuchi, M.
PDB entry 3w4o: Crystal structure of PenI beta-lactamase from Burkholderia pseudomallei at pH9.5
Classification: HYDROLASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2013-01-10
Authors: Nukaga, M., Ohuchi, N., Papp-Wallace, K.M., Taracila, M.A., Bonomo, R.A.
PDB entry 3w4p: Crystal structure of PenI beta-lactamase from Burkholderia pseudomallei at pH7.5
Classification: HYDROLASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2013-01-10
Authors: Nukaga, M., Ohuchi, N., Papp-Wallace, K.M., Taracila, M.A., Bonomo, R.A.
PDB entry 3w4q: Crystal structure of PenA beta-lactamase from Burkholderia multivorans at pH4.2
Classification: HYDROLASE
Source organism: Burkholderia multivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2013-01-10
Authors: Nukaga, M., Ohuchi, N., Papp-Wallace, K.M., Taracila, M.A., Bonomo, R.A.
PDB entry 3w4r: Crystal structure of an insect chitinase from the Asian corn borer, Ostrinia furnacalis
Classification: HYDROLASE
Source organism: Ostrinia furnacalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-01-10
Authors: Chen, L., Liu, T., Zhou, Y., Shen, X., Yang, Q.
PDB entry 3w4s: Myo-inositol kinase from Thermococcus kodakarensis
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2013-01-10
Authors: Fujihashi, M., Miyamoto, Y., Miki, K.
PDB entry 3w4t: Crystal structure of MATE P26A mutant
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.096 Å
Deposited: 2013-01-16
Authors: Tanaka, Y., Ishitani, R., Nureki, O.
PDB entry 3w4u: Human zeta-2 beta-2-s hemoglobin
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-01-16
Authors: Safo, M.K., Ko, T.-P., Russell, J.E.
PDB entry 3w4y: Crystal structure of yeast Erv1 core
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-01-17
Authors: Kawano, S., Terao, K., Watanabe, N., Endo, T.
PDB entry 3w51: Tankyrase in complex with 2-hydroxy-4-methylquinoline
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-01-18
Authors: Jansson, A.E., Larsson, E.A., Nordlund, P.L.
PDB entry 3w52: Zinc-dependent bifunctional nuclease
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2013-01-18
Authors: Chou, T.L., Ko, T.P., Ko, C.Y., Shaw, J.F., Wang, A.H.J.
PDB entry 3w53: Crystal structure of psychrophilic beta-glucosidase BglU from Micrococcus antarcticus
Classification: HYDROLASE
Source organism: Micrococcus antarcticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-01-18
Authors: Hou, Y.J., Miao, L.L., Li, D.F., Liu, Z.P.
PDB entry 3w54: Crystal structure of cyanide-insensitive alternative oxidase from Trypanosoma brucei with colletochlorin B
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-01-21
Authors: Shiba, T., Kido, Y., Sakamoto, K., Inaoka, D.K., Tsuge, C., Tatsumi, R., Takahashi, G., Balogun, E.O., Nara, T., Aoki, T., Honma, T., Tanaka, A., Inoue, M., Matsuoka, S., Saimoto, H., Moore, A.L., Harada, S., Kita, K.
PDB entry 3w55: The structure of ERK2 in complex with FR148083
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-01-21
Authors: Ohori, M., Kinoshita, T.
PDB entry 3w56: Structure of a C2 domain
Classification: LIPID BINDING PROTEIN
Source organism: Scophthalmus maximus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-01-24
Authors: Traore, D.A.K., Whisstock, J.C.
PDB entry 3w57: Structure of a C2 domain
Classification: LIPID BINDING PROTEIN
Source organism: Scophthalmus maximus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.662 Å
Deposited: 2013-01-24
Authors: Traore, D.A.K., Whisstock, J.C.
PDB entry 3w58: Crystal structure of Galectin-1 in the lactose-unbound state(P21)
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2013-01-25
Authors: Saburi, H., Tanaka, T., Kunishima, N.
PDB entry 3w59: Crystal structure of Galectin-1 in the lactose-unbound state(P212121)
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-01-26
Authors: Saburi, H., Tanaka, T., Kunishima, N.
PDB entry 3w5a: Crystal structure of the calcium pump and sarcolipin from rabbit fast twitch skeletal muscle in the E1.Mg2+ state
Classification: METAL TRANSPORT/MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2013-01-27
Authors: Toyoshima, C., Iwasawa, S., Ogawa, H., Hirata, A., Tsueda, J., Inesi, G.
PDB entry 3w5b: Crystal structure of the recombinant SERCA1a (calcium pump of fast twitch skeletal muscle) in the E1.Mg2+ state
Classification: METAL TRANSPORT
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2013-01-27
Authors: Toyoshima, C., Iwasawa, S., Ogawa, H., Hirata, A., Tsueda, J., Inesi, G.
PDB entry 3w5c: Crystal structure of the calcium pump in the E2 state free from exogenous inhibitors
Classification: METAL TRANSPORT
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-01-27
Authors: Toyoshima, C., Iwasawa, S., Ogawa, H., Hirata, A., Tsueda, J., Inesi, G.
PDB entry 3w5d: Crystal structure of the calcium pump in the E2+Pi state
Classification: METAL TRANSPORT
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2013-01-27
Authors: Toyoshima, C., Iwasawa, S., Ogawa, H., Hirata, A., Tsueda, J., Inesi, G.
PDB entry 3w5e: Crystal structure of phosphodiesterase 4B in complex with compound 31e
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-01-28
Authors: Takahashi, M., Hanzawa, H.
PDB entry 3w5f: Crystal structure of tomato beta-galactosidase 4
Classification: HYDROLASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-01-29
Authors: Eda, M., Tada, T.
PDB entry 3w5g: Crystal structure of tomato beta-galactosidase 4 in complex with galactose
Classification: HYDROLASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-01-29
Authors: Eda, M., Tada, T.
PDB entry 3w5h: Ultra-high resolution structure of NADH-cytochrome b5 reductase
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 0.78 Å
Deposited: 2013-01-30
Authors: Takeda, K., Ohno, H., Kosugi, M., Takaba, K., Miki, K.
PDB entry 3w5i: Crystal structure of NfeoB from Gallionella capsiferriformans
Classification: METAL TRANSPORT
Source organism: Gallionella capsiferriformans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-01-30
Authors: Deshpande, C.N., McGrath, A.P., Jormakka, M.
PDB entry 3w5j: Crystal structure of GDP-bound NfeoB from Gallionella capsiferriformans
Classification: METAL TRANSPORT
Source organism: Gallionella capsiferriformans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.932 Å
Deposited: 2013-01-30
Authors: Deshpande, C.N., McGrath, A.P., Jormakka, M.
PDB entry 3w5k: Crystal structure of Snail1 and importin beta complex
Classification: NUCLEAR PROTEIN/METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-01-30
Authors: Choi, S., Yamashita, E., Yasuhara, N., Song, J., Son, S.Y., Won, Y.H., Shin, Y.S., Sekimoto, T., Park, I.Y., Yoneda, Y., Lee, S.J.
PDB entry 3w5m: Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase
Classification: HYDROLASE
Source organism: Streptomyces avermitilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-01-31
Authors: Fujimoto, Z., Jackson, A., Michikawa, M., Maehara, T., Momma, M., Henrissat, B.F., Gilbert, H.J., Kaneko, S.
PDB entry 3w5n: Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose
Classification: HYDROLASE
Source organism: Streptomyces avermitilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-01-31
Authors: Fujimoto, Z., Jackson, A., Michikawa, M., Maehara, T., Momma, M., Henrissat, B.F., Gilbert, H.J., Kaneko, S.
PDB entry 3w5o: Crystal Structure of Human DNA ligase IV
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2013-02-02
Authors: Gu, X., Ochi, T., Blundell, T.L.
PDB entry 3w5p: Crystal structure of complexes of vitamin D receptor ligand binding domain with lithocholic acid derivatives
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-02-05
Authors: Masuno, H., Ikura, T., Ito, N.
PDB entry 3w5q: Crystal structure of complexes of vitamin D receptor ligand binding domain with lithocholic acid derivatives
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-02-05
Authors: Masuno, H., Ikura, T., Ito, N.
PDB entry 3w5r: Crystal structure of complexes of vitamin D receptor ligand binding domain with lithocholic acid derivatives
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-02-06
Authors: Masuno, H., Ikura, T., Ito, N.
PDB entry 3w5s: Crystal Structure of Maleylacetate Reductase from Rhizobium sp. strain MTP-10005
Classification: OXIDOREDUCTASE
Source organism: Rhizobium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2013-02-06
Authors: Fujii, T., Ogawa, A., Goda, Y., Yamauchi, T., Yoshida, M., Oikawa, T., Hata, Y.
PDB entry 3w5t: Crystal structure of complexes of vitamin D receptor ligand binding domain with lithocholic acid derivatives
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2013-02-06
Authors: Masuno, H., Ikura, T., Ito, N.
PDB entry 3w5u: Cross-linked complex between Ferredoxin and Ferredoxin-NADP+ reductase
Classification: ELECTRON TRANSPORT
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-02-06
Authors: Kimata-Ariga, Y., Kubota-Kawai, H., Muraki, N., Hase, T., Kurisu, G.
PDB entry 3w5v: Cross-linked complex between Ferredoxin and Ferredoxin-NADP+ reductase
Classification: ELECTRON TRANSPORT
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 3.81 Å
Deposited: 2013-02-06
Authors: Kimata-Ariga, Y., Kubota-Kawai, H., Muraki, N., Hase, T., Kurisu, G.
PDB entry 3w5w: Mn2+-GMP complex of nanoRNase (Nrn) from Bacteroides fragilis
Classification: HYDROLASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2013-02-07
Authors: Uemura, Y., Nakagawa, N., Wakamatsu, T., Montelione, G.T., Hunt, J.F., Masui, R., Kuramitsu, S.
PDB entry 3w5x: MamM-CTD
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-02-10
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w5y: MamM-CTD
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-02-10
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w5z: MamM-CTD D249A
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2013-02-10
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w60: MamM-CTD H264A
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2013-02-10
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w61: MamM-CTD H285A
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2013-02-10
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w62: MamM-CTD E289A
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2013-02-10
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w63: MamM-CTD 215-293
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-02-10
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w64: MamM-CTD 215-293
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2013-02-10
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w65: MamM-CTD D249A and H264A
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2013-02-10
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w66: MamM-CTD D249A and H285A
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-02-11
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w67: Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(3,4)-bisphosphate
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2013-02-11
Authors: Ohto, U., Satow, Y.
PDB entry 3w68: Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(4,5)-bisphosphate
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-02-11
Authors: Ohto, U., Satow, Y.
PDB entry 3w69: Crystal structure of human mdm2 with a dihydroimidazothiazole inhibitor
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-02-12
Authors: Shimizu, H., Katakura, S., Miyazaki, M., Naito, H., Sugimoto, Y., Kawato, H., Okayama, T., Soga, T.
PDB entry 3w6a: Crystal structure of cross-linked tetragonal hen egg white lysozyme soaked wiht 5mM [Ru(benzene)Cl2]2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2013-02-13
Authors: Tabe, H., Abe, S., Hikage, T., Kitagawa, S., Ueno, T.
PDB entry 3w6b: Crystal structure of catalytic domain of chitinase from Ralstonia sp. A-471
Classification: HYDROLASE
Source organism: Ralstonia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-02-14
Authors: Arimori, T., Kawamoto, N., Okazaki, N., Nakazawa, M., Miyatake, K., Fukamizo, T., Ueda, M., Tamada, T.
PDB entry 3w6c: Crystal structure of catalytic domain of chitinase from Ralstonia sp. A-471 in complex with disaccharide
Classification: HYDROLASE
Source organism: Ralstonia
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-02-14
Authors: Arimori, T., Kawamoto, N., Okazaki, N., Nakazawa, M., Miyatake, K., Fukamizo, T., Ueda, M., Tamada, T.
PDB entry 3w6d: Crystal structure of catalytic domain of chitinase from Ralstonia sp. A-471 (E141Q) in complex with tetrasaccharide
Classification: HYDROLASE
Source organism: Ralstonia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-02-14
Authors: Arimori, T., Kawamoto, N., Okazaki, N., Nakazawa, M., Miyatake, K., Fukamizo, T., Ueda, M., Tamada, T.
PDB entry 3w6e: Crystal structure of catalytic domain of chitinase from Ralstonia sp. A-471 (E162Q)
Classification: HYDROLASE
Source organism: Ralstonia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-02-14
Authors: Arimori, T., Kawamoto, N., Okazaki, N., Nakazawa, M., Miyatake, K., Fukamizo, T., Ueda, M., Tamada, T.
PDB entry 3w6f: Crystal structure of catalytic domain of chitinase from Ralstonia sp. A-471 (E162Q) in complex with disaccharide
Classification: HYDROLASE
Source organism: Ralstonia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-02-14
Authors: Arimori, T., Kawamoto, N., Okazaki, N., Nakazawa, M., Miyatake, K., Fukamizo, T., Ueda, M., Tamada, T.
PDB entry 3w6g: Structure of peroxiredoxin from anaerobic hyperthermophilic archaeon Pyrococcus horikoshii
Classification: OXIDOREDUCTASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-02-14
Authors: Nakamura, T., Mori, A., Niiyama, M., Matsumura, H., Tokuyama, C., Morita, J., Uegaki, K., Inoue, T.
PDB entry 3w6h: Crystal structure of 19F probe-labeled hCAI in complex with acetazolamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.964 Å
Deposited: 2013-02-14
Authors: Takaoka, Y., Kioi, Y., Morito, A., Otani, J., Arita, K., Ashihara, E., Ariyoshi, M., Tochio, H., Shirakawa, M., Hamachi, I.
PDB entry 3w6i: Crystal structure of 19F probe-labeled hCAI
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.693 Å
Deposited: 2013-02-14
Authors: Takaoka, Y., Kioi, Y., Morito, A., Otani, J., Arita, K., Ashihara, E., Ariyoshi, M., Tochio, H., Shirakawa, M., Hamachi, I.
PDB entry 3w6j: Crystal structure of ScpAB core complex
Classification: CELL CYCLE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-02-15
Authors: Kamada, K., Hirano, T.
PDB entry 3w6k: Crystal structure of dimer of ScpB N-terminal domain complexed with ScpA peptide
Classification: CELL CYCLE
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.374 Å
Deposited: 2013-02-15
Authors: Kamada, K., Hirano, T.
PDB entry 3w6l: Contribution of disulfide bond toward thermostability in hyperthermostable endocellulase
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.751 Å
Deposited: 2013-02-15
Authors: Kim, H.-W., Ishikawa, K.
PDB entry 3w6m: Contribution of disulfide bond toward thermostability in hyperthermostable endocellulase
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.948 Å
Deposited: 2013-02-15
Authors: Kim, H.-W., Ishikawa, K.
PDB entry 3w6n: Crystal structure of human Dlp1 in complex with GMP-PN.Pi
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-02-17
Authors: Kishida, H., Sugio, S.
PDB entry 3w6o: Crystal structure of human Dlp1 in complex with GMP-PCP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-02-17
Authors: Kishida, H., Sugio, S.
PDB entry 3w6p: Crystal structure of human Dlp1 in complex with GDP.AlF4
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-02-17
Authors: Kishida, H., Sugio, S.
PDB entry 3w6q: Crystal structure of melB apo-protyrosinase from Asperugillus oryzae
Classification: OXIDOREDUCTASE
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.052 Å
Deposited: 2013-02-20
Authors: Fujieda, N., Yabuta, S., Ikeda, T., Oyama, T., Muraki, N., Kurisu, G., Itoh, S.
PDB entry 3w6r: Crystal structure of the GAP domain of human MgcRacGAP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-02-21
Authors: Matsuura, A., Lee, H.H.
PDB entry 3w6s: yeast N-acetyltransferase Mpr1 involved in oxidative stress tolerance via proline metabolism
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-02-21
Authors: Nasuno, R., Hirano, Y., Itoh, T., Hakoshima, T., Hibi, T., Takagi, H.
PDB entry 3w6u: Crystal structure of NADP bound L-serine 3-dehydrogenase from Hyperthermophilic Archaeon Pyrobaculum calidifontis
Classification: OXIDOREDUCTASE
Source organism: Pyrobaculum calidifontis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-02-22
Authors: Yoneda, K., Sakuraba, H., Ohshima, T.
PDB entry 3w6v: Crystal structure of the DNA-binding domain of AdpA, the global transcriptional factor, in complex with a target DNA
Classification: TRANSCRIPTION ACTIVATOR/DNA
Source organism: Streptomyces griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2013-02-22
Authors: Yao, M.D., Ohtsuka, J., Nagata, K., Miyazono, K., Ohnishi, Y., Tanokura, M.
PDB entry 3w6w: Crystal structure of melB holo-protyrosinase from Asperugillus oryzae
Classification: OXIDOREDUCTASE
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.394 Å
Deposited: 2013-02-22
Authors: Fujieda, N., Yabuta, S., Ikeda, T., Oyama, T., Muraki, N., Kurisu, G., Itoh, S.
PDB entry 3w6x: Yeast N-acetyltransferase Mpr1 in complex with CHOP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.299 Å
Deposited: 2013-02-25
Authors: Nasuno, R., Hirano, Y., Itoh, T., Hakoshima, T., Hibi, T., Takagi, H.
PDB entry 3w6y: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-2-199
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2013-02-27
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w6z: Crystal structure of NADP bound L-serine 3-dehydrogenase (K170M) from Hyperthermophilic Archaeon Pyrobaculum calidifontis
Classification: OXIDOREDUCTASE
Source organism: Pyrobaculum calidifontis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2013-02-27
Authors: Yoneda, K., Sakuraba, H., Ohshima, T.
PDB entry 3w70: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-095
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-02-27
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w71: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-097
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2013-02-27
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w72: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-107
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-02-27
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.