LiteFold/PDB huggingface dataset:
PDB entry 8kgq: Structure of African swine fever virus topoisomerase II in complex with dsDNA
Classification: VIRAL PROTEIN/DNA
Source organism: African swine fever virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2023-08-19
Authors: Cong, J., Xin, Y., Li, X., Chen, Y.
PDB entry 8kgr: Structure of African swine fever virus topoisomerase II in complex with dsDNA
Classification: VIRAL PROTEIN/DNA
Source organism: African swine fever virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-08-19
Authors: Cong, J., Xin, U., Li, X., Chen, Y.
PDB entry 8kgs: Structure of African swine fever virus topoisomerase II in complex with dsDNA
Classification: VIRAL PROTEIN
Source organism: African swine fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.603 Å
Deposited: 2023-08-19
Authors: Cong, J., Xin, Y., Li, X., Chen, Y.
PDB entry 8kgt: Structure of African swine fever virus topoisomerase II in complex with dsDNA
Classification: VIRAL PROTEIN
Source organism: African swine fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-08-19
Authors: Cong, J., Xin, Y., Li, X., Chen, Y.
PDB entry 8kgv: Molecular mechanism of prostaglandin transporter SLCO2A1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-08-19
Authors: Li, Y.H., Qu, Q.H., Zhu, Z.N., Chao, Y.L., Zhou, Z.X.
PDB entry 8kgw: Molecular mechanism of prostaglandin transporter SLCO2A1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2023-08-19
Authors: Li, Y.H., Qu, Q.H., Zhu, Z.N., Chao, Y.L., Zhou, Z.X.
PDB entry 8kgy: Human glutamate dehydrogenase I
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2023-08-20
Authors: Su, M.-Y.
PDB entry 8kgz: Crystal structure of single-chain Fv antibody against antigen peptide from SARS-CoV2 S-spike protein
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli (strain K12); Ovis aries
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2023-08-20
Authors: Ma, Q.Q., Zhang, B.L., Cheng, X.Y., Huang, Y.Q., Su, Z.D.
PDB entry 8kh1: Phage SPO1 protein Gp49 is a novel RNA binding protein that involves in host iron metabolism
Classification: RNA BINDING PROTEIN
Source organism: Bacillus phage SPO1
Experimental method: SOLUTION NMR
Deposited: 2023-08-21
Authors: Liu, B.
PDB entry 8kh2: Crystal structure of horse-spleen L-ferritin fused with amyloid beta peptide (1-42).
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-21
Authors: Maity, B., Tian, J., Abe, S., Ueno, T.
PDB entry 8kh3: Crystal Structure of Kemp Eliminase HG3.17 in complexed with 5-cyanobenzotriazole
Classification: LYASE
Source organism: Thermoascus aurantiacus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-21
Authors: Bunzel, A., Mori, T., Hilvert, D.
PDB entry 8kh4: Cryo-EM structure of the GPR161-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-08-21
Authors: Nie, Y., Qiu, Z., Zheng, S., Chen, S.
PDB entry 8kh5: Cryo-EM structure of the GPR174-Gs complex bound to endogenous lysoPS
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-08-21
Authors: Nie, Y., Qiu, Z., Zheng, S., Chen, S.
PDB entry 8kh6: Crystal structure of FGFR4 kinase domain with 8r
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2023-08-21
Authors: Lin, Q.M., Chen, X.J., Chen, Y.H.
PDB entry 8kh7: Crystal structure of FGFR4 kinase domain with 8zc
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2023-08-21
Authors: Lin, Q.M., Chen, X.J., Chen, Y.H.
PDB entry 8kh8: Crystal structure of FGFR4(V550L) kinase domain with 8z
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2023-08-21
Authors: Lin, Q.M., Chen, X.J., Chen, Y.H.
PDB entry 8kh9: Crystal structure of FGFR4(V550M) kinase domain with 8z
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-08-21
Authors: Lin, Q.M., Chen, X.J., Chen, Y.H.
PDB entry 8khc: SARS-CoV-2 Omicron spike in complex with 5817 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-08-21
Authors: Cao, L., Wang, X.
PDB entry 8khd: The interface structure of Omicron RBD binding to 5817 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-08-21
Authors: Cao, L., Wang, X.
PDB entry 8khf: Structure of the human ATP synthase bound to bedaquiline (membrane domain)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-08-21
Authors: Lai, Y., Zhang, Y.
PDB entry 8khg: Itaconyl-CoA hydratase PaIch
Classification: UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-08-21
Authors: Huang, Q., Bao, R.
PDB entry 8khh: Crystal structure of 2'-dG-III riboswitch with guanosine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-08-21
Authors: Liao, W., Huang, L.
PDB entry 8khl: (S)-citramalyl-CoA lyase
Classification: LYASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-08-22
Authors: Huang, Q., Bao, R.
PDB entry 8khm: Crystal structure of human methionine aminopeptidase 12 (MAP12) in the unbound form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2023-08-22
Authors: Lee, Y., Lee, E., Hahn, H., Kim, H., Heo, Y., Jang, D.M., Kim, H.J., Kim, H.S.
PDB entry 8khn: Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two cobalt ions
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2023-08-22
Authors: Lee, Y., Lee, E., Hahn, H., Kim, H., Heo, Y., Jang, D.M., Kim, H.J., Kim, H.S.
PDB entry 8kho: Crystal structure of human methionine aminopeptidase 12 (MAP12) in complex with two Cobalt ions and Methionine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-08-22
Authors: Lee, Y., Lee, E., Hahn, H., Kim, H., Heo, Y., Jang, D.M., Kim, H.J., Kim, H.S.
PDB entry 8khp: CULLIN3-KLHL22-RBX1 E3 ligase
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2023-08-22
Authors: Su, M.-Y., Su, M.-Y.
PDB entry 8khq: Bifunctional sulfoxide synthase OvoA_Th2 in complex with histidine and cysteine
Classification: OXIDOREDUCTASE
Source organism: Hydrogenimonas thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2023-08-22
Authors: Wang, J., Ye, K., Wang, X.Y., Yan, W.P.
PDB entry 8khr: Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Epstein-Barr virus (strain GD1); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-08-22
Authors: Fang, X.Y., Zhao, G.X., Zeng, M.S., Liu, Z.
PDB entry 8khs: the structure of a glutamine amidotransferase DnfC from Alcaligenes sp.
Classification: TRANSFERASE
Source organism: Alcaligenes ammonioxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-08-22
Authors: Qin, Y.L., Li, D.F.
PDB entry 8kht: The structure of Rv0097 with substrate
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-08-22
Authors: Chen, J., Zhou, J.
PDB entry 8khu: Hepatitis B virus core protein Y132A mutant in complex with THPP derivatives 48
Classification: VIRAL PROTEIN
Source organism: Hepatitis B virus adw/991
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-22
Authors: Zhou, Z., Xu, Z.H.
PDB entry 8khv: The crystal structure of glycosaminoglycan lyase GAGase II
Classification: LYASE
Source organism: Spirosoma fluviale
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-08-22
Authors: Wei, L., Cao, H.Y., Li, F.C.
PDB entry 8khw: The crystal structure of glycosaminoglycan lyase GAGase VII
Classification: LYASE
Source organism: Bacteroides intestinalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-08-22
Authors: Wei, L., Cao, H.Y., Li, F.C.
PDB entry 8ki0: Crystal structure of the hemophore HasA from Pseudomonas protegens Pf-5 capturing Fe-tetraphenylporphyrin
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas protegens Pf-5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-08-22
Authors: Shisaka, Y., Inaba, H., Sugimoto, H., Shoji, O.
PDB entry 8ki1: Crystal structure of the holo form of the hemophore HasA from Pseudomonas protegens Pf-5
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas protegens Pf-5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-08-22
Authors: Shisaka, Y., Inaba, H., Sugimoto, H., Shoji, O.
PDB entry 8ki3: Structure of the human ATP synthase bound to bedaquiline (composite)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2023-08-22
Authors: Lai, Y., Zhang, Y., Gong, H.
PDB entry 8ki4: Crystal structure of human HSP90 in intermediate state
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-08-22
Authors: Xu, C., Zhang, X.L., Bai, F.
PDB entry 8ki5: PhmA, a type I diterpene synthase without NST/DTE motif
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phoma
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-08-22
Authors: Zhang, B., Ge, H.M., Zhu, A., Zhang, Y.
PDB entry 8ki6: Structure of tomato spotted wilt virus L protein binding to Ribavirin
Classification: VIRAL PROTEIN
Source organism: Orthotospovirus tomatomaculae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-08-23
Authors: Cao, L., Wang, X.
PDB entry 8ki7: Structure of Tomato spotted wilt virus L protein contained endoH domain binding to 3'5'vRNA
Classification: VIRAL PROTEIN/RNA
Source organism: Tomato spotted wilt virus (strain Bulgarian L3); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-08-23
Authors: Cao, L., Wang, X.
PDB entry 8ki8: structure of Tomato spotted wilt virus L protein binding to 5'vRNA
Classification: VIRAL PROTEIN/RNA
Source organism: Orthotospovirus tomatomaculae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-08-23
Authors: Cao, L., Wang, X.
PDB entry 8ki9: Structure of Tomato spotted wilt virus L protein contained CTD
Classification: VIRAL PROTEIN
Source organism: Orthotospovirus tomatomaculae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-08-23
Authors: Cao, L., Wang, L.
PDB entry 8kia: Tomato spotted wilt virus L protein (apo state)
Classification: VIRAL PROTEIN
Source organism: Orthotospovirus tomatomaculae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-08-23
Authors: Cao, L., Wang, X.
PDB entry 8kib: NADP+-dependent cytosolic isocitrate dehydrogenase complexed with oxaloacetate
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-08-23
Authors: Kang, B.S., Cho, H.Y.
PDB entry 8kic: Bacterial serine protease
Classification: HYDROLASE
Source organism: Escherichia coli; Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-08-23
Authors: Lee, I.-G., Jeon, H.
PDB entry 8kie: Structure of YchF with 50S ribosomal subunit (local map)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-08-23
Authors: Yu, T., Li, X., Zeng, F.
PDB entry 8kif: The structure of MmaE with substrate
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium marinum M
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2023-08-23
Authors: Chen, J., Zhou, J.
PDB entry 8kig: Cryo-EM structure of MC3R in complex with SHU9119
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Pyrococcus abyssi GE5; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-08-23
Authors: Chen, Q., Fu, J.
PDB entry 8kih: PhmA, a type I diterpene synthase without NST/DTE motif
Classification: BIOSYNTHETIC PROTEIN
Source organism: Phoma
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-23
Authors: Zhang, B., Ge, H.M., Zhu, A., Zhang, Y.
PDB entry 8kme: CRYSTAL STRUCTURE OF HUMAN ALPHA-THROMBIN INHIBITED WITH SEL2770.
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 1999-03-21
Authors: Mochalkin, I., Tulinsky, A.
PDB entry 8ldh: REFINED CRYSTAL STRUCTURE OF DOGFISH M4 APO-LACTATE DEHYDROGENASE
Classification: OXIDOREDUCTASE
Source organism: Squalus acanthias
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 1988-01-04
Authors: Abad-Zapatero, C., Rossmann, M.G.
PDB entry 8lpr: STRUCTURAL BASIS FOR BROAD SPECIFICITY IN ALPHA-LYTIC PROTEASE MUTANTS
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Lysobacter enzymogenes; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 1991-08-05
Authors: Fujishige, A., Bone, R., Agard, D.A.
PDB entry 8lyz: AN X-RAY STUDY OF THE STRUCTURE AND BINDING PROPERTIES OF IODINE-INACTIVATED LYSOZYME
Classification: HYDROLASE (O-GLYCOSYL)
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1977-09-16
Authors: Beddell, C.R., Blake, C.C.F., Oatley, S.J.
PDB entry 8mht: CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEX
Classification: TRANSFERASE/DNA
Source organism: Haemophilus haemolyticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 1998-08-06
Authors: O'Gara, M., Horton, J.R., Roberts, R.J., Cheng, X.
PDB entry 8msi: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 N14SQ44T
Classification: ANTIFREEZE PROTEIN
Source organism: Macrozoarces americanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 1999-01-24
Authors: Graether, S.P., Deluca, C.I., Baardsnes, J., Hill, G.A., Davies, P.L., Jia, Z.
PDB entry 8nse: BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE, NNA COMPLEX
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 1999-01-14
Authors: Raman, C.S., Li, H., Martasek, P., Masters, B.S.S., Poulos, T.L.
PDB entry 8odn: RcpA-TadD with C13 symmetry from the Pseudomonas aeruginosa Tight Adherence Secretion System
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-03-09
Authors: Tassinari, M., Low, H.H.
PDB entry 8odo: Structure of human guanylylated RTCB in complex with Archease
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-03-09
Authors: Kopp, J., Gerber, J.L., Peschek, J.
PDB entry 8odp: Structure of human RTCB with GMPCPP in complex with Archease
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-03-09
Authors: Kopp, J., Gerber, J.L., Peschek, J.
PDB entry 8odq: SufS-SufU complex from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-03-09
Authors: Elchennawi, I., Carpentier, P., Caux, C., Ponge, M., Ollagnier de Choudens, S.
PDB entry 8odr: Mimetic of UBC9-SUMO1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-03-09
Authors: Coste, F., Goffinont, S., Suskiewicz, M.J.
PDB entry 8ods: Phosphate-Binding Protein (PstS) from Xanthomonas citri pv. citri A306 bound to phosphate
Classification: TRANSPORT PROTEIN
Source organism: Xanthomonas citri pv. citri str. 306
Experimental method: X-RAY DIFFRACTION
Resolution: 1.909 Å
Deposited: 2023-03-09
Authors: Santos, L.S., Balan, A., Guskov, A.
PDB entry 8odt: Structure of TolQR complex from E.coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-03-09
Authors: Webby, M.N., Kleanthous, C., Press, C.E.
PDB entry 8odu: Chaetomium thermophilum Get1/Get2 heterotetramer in complex with a Get3 dimer (amphipol)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2023-03-09
Authors: McDowell, M.A., Wild, K., Sinning, I.
PDB entry 8odv: Chaetomium thermophilum Get1/Get2 heterotetramer in complex with a Get3 dimer (nanodisc)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2023-03-09
Authors: McDowell, M.A., Wild, K., Sinning, I.
PDB entry 8odw: Crystal structure of LbmA Ox-ACP didomain in complex with NADP and ethyl glycinate from the lobatamide PKS (Gynuella sunshinyii)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Gynuella sunshinyii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2023-03-09
Authors: Francois, R.M.M., Fraley, A.E., Piel, J., Weissman, K.J., Gruez, A.
PDB entry 8odx: Interleukin 12 receptor subunit beta-1 Fn domains in complex with antagonistic FAb4 fragment and VHH.
Classification: CYTOKINE
Source organism: Homo sapiens; Homo sapiens x Mus musculus hybrid cell line; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 4.4 Å
Deposited: 2023-03-09
Authors: Bloch, Y., Savvides, S.N.
PDB entry 8odz: Cryo-EM structure of a pre-dimerized murine IL-12 complete extracellular signaling complex (Class 1).
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-03-10
Authors: Felix, J., Bloch, Y., Savvides, S.N.
PDB entry 8oe0: Cryo-EM structure of a pre-dimerized murine IL-12 complete extracellular signaling complex (Class 2).
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2023-03-10
Authors: Felix, J., Bloch, Y., Savvides, S.N.
PDB entry 8oe1: Structure of P167S BlaC from Mycobacterium tuberculosis at pH 5
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-03-10
Authors: Sun, J., Chikunova, A., Ubbink, M.
PDB entry 8oe2: Structure of hyperstable haloalkane dehalogenase variant DhaA223
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2023-03-10
Authors: Marek, M.
PDB entry 8oe3: Crystal structure of the non-canonical quadruplex d(GCATGCT) before soaking
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2023-03-10
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8oe4: Cryo-EM structure of a pre-dimerized human IL-23 complete extracellular signaling complex.
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-03-10
Authors: Bloch, Y., Felix, J., Savvides, S.N.
PDB entry 8oe5: Structure of P167S BlaC from Mycobacterium tuberculosis at pH 6.3
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-10
Authors: Sun, J., Chikunova, A., Ubbink, M.
PDB entry 8oe6: Structure of hyperstable haloalkane dehalogenase variant DhaA231
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2023-03-10
Authors: Marek, M.
PDB entry 8oe7: Crystal structure of the Z-DNA duplex d(CGCGCG) containing ordered copper(II) and soaked in hydrogen peroxide for 5 minutes
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-03-10
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8oe8: Crystal structure of the Z-DNA duplex d(CGCGCG) containing ordered copper(II) and soaked in hydrogen peroxide for an hour
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-03-10
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8oe9: Crystal structure of the Z-DNA duplex d(CGCGCG) soaked in copper(II) chloride and hydrogen peroxide
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2023-03-10
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8oea: Crystal structure of the Z-DNA duplex d(CGCGCG) soaked in copper(II) chloride, in preparation to hydrogen peroxide soaking, first collection at room temperature
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-10
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8oeb: Crystal structure of the Z-DNA duplex d(CGCGCG) containing ordered copper(II) and soaked in hydrogen peroxide for 30 minutes, second collection at room temperature
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-10
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8oec: Crystal structure of the Z-DNA duplex d(CGCGCG) containing ordered copper(II) and soaked in hydrogen peroxide for another 30 minutes, third collection at room temperature
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-03-10
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8oed: Aspergillus niger ferulic acid decarboxylase (Fdc) S145C-P289C (DB2) variant in complex with prenylated flavin hydroxylated at the C1 prime position
Classification: LYASE
Source organism: Aspergillus niger CBS 513.88
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2023-03-10
Authors: Roberts, G.W., Leys, D.
PDB entry 8oee: Crystal structure of human AQP2 T126M mutant
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2023-03-10
Authors: Horsefield, S., Hagstroemer, C.J.
PDB entry 8oef: Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6)
Classification: RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-03-10
Authors: Yi, G., Ye, M., Gilbert, R.J.
PDB entry 8oeg: PDE4B bound to MAPI compound 92a
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2023-03-10
Authors: Rizzi, A., Armani, E.
PDB entry 8oeh: Aspergillus niger ferulic acid decarboxylase (Fdc) C122-S261C (DB3) variant in complex with prenylated flavin
Classification: LYASE
Source organism: Aspergillus niger CBS 513.88
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-03-10
Authors: Roberts, G.W., Leys, D.
PDB entry 8oei: SFX structure of FutA after an accumulated dose of 350 kGy
Classification: METAL BINDING PROTEIN
Source organism: Prochlorococcus marinus subsp. pastoris str. CCMP1986
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-03-10
Authors: Bolton, R., Tews, I.
PDB entry 8oej: Extended RPA-DNA nucleoprotein filament
Classification: DNA BINDING PROTEIN
Source organism: Pyrococcus abyssi; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2023-03-10
Authors: Madru, C., Martinez-Carranza, M., Sauguet, L.
PDB entry 8oek: Crystal structure of the HormR-GAIN domains of adhesion GPCR ADGRB2 (BAI2) in the uncleaved state
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2023-03-10
Authors: Pohl, F., Strater, N.
PDB entry 8oel: Condensed RPA-DNA nucleoprotein filament
Classification: DNA BINDING PROTEIN
Source organism: Pyrococcus abyssi; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.2 Å
Deposited: 2023-03-10
Authors: Madru, C., Martinez-Carranza, M., Sauguet, L.
PDB entry 8oem: Crystal structure of FutA bound to Fe(II)
Classification: METAL BINDING PROTEIN
Source organism: Prochlorococcus marinus subsp. pastoris str. CCMP1986
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-03-10
Authors: Bolton, R., Tews, I.
PDB entry 8oeo: Aspergillus niger ferulic acid decarboxylase (Fdc) V186C-A296C (DB4) variant in complex with prenylated flavin
Classification: LYASE
Source organism: Aspergillus niger CBS 513.88
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-03-10
Authors: Roberts, G.W., Leys, D.
PDB entry 8oep: Crystal structure of the PTPN3 PDZ domain bound to the HPV18 E6 oncoprotein C-terminal peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-03-11
Authors: Genera, M., Colcombet-Cazenave, B., Croitoru, A., Raynal, B., Mechaly, A., Caillet, J., Haouz, A., Wolff, N., Caillet-Saguy, C.
PDB entry 8oeq: Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)
Classification: RIBOSOME
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-03-12
Authors: Kolosova, O., Zgadzay, Y., Yusupov, M.
PDB entry 8oer: MUC5B amino acids 26-1435
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-03-12
Authors: Khmelnitsky, L., Fass, D.
PDB entry 8oes: MUC5B amino acids 26-1435 Three beads
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-03-12
Authors: Khmelnitsky, L., Fass, D.
PDB entry 8oet: SFX structure of the class II photolyase complexed with a thymine dimer
Classification: LYASE
Source organism: Methanosarcina mazei Go1; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2023-03-12
Authors: Lane, T.J., Christou, N.-E., Melo, D.V.M., Apostolopoulou, V., Pateras, A., Mashhour, A.R., Galchenkova, M., Gunther, S., Reinke, P., Kremling, V., Oberthuer, D., Henkel, A., Sprenger, J., Scheer, T.E.S., Lange, E., Yefanov, O.N., Middendorf, P., Sellberg, J.A., Schubert, R., Fadini, A., Cirelli, C., Beale, E.V., Johnson, P., Dworkowski, F., Ozerov, D., Bertrand, Q., Wranik, M., Zitter, E.D., Turk, D., Bajt, S., Chapman, H., Bacellar, C.
PDB entry 8oeu: Structure of the mammalian Pol II-SPT6 complex (composite structure, Structure 4)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-03-13
Authors: Chen, Y., Kokic, G., Dienemann, C., Dybkov, O., Urlaub, H., Cramer, P.
PDB entry 8oev: Structure of the mammalian Pol II-SPT6-Elongin complex, lacking ELOA latch (composite structure, structure 3)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-03-13
Authors: Chen, Y., Kokic, G., Dienemann, C., Dybkov, O., Urlaub, H., Cramer, P.
PDB entry 8oew: Structure of the mammalian Pol II-Elongin complex, lacking the ELOA latch (composite structure, structure 2)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-03-13
Authors: Chen, Y., Kokic, G., Dienemann, C., Dybkov, O., Urlaub, H., Cramer, P.
PDB entry 8oex: Crystal structure of the native Z-DNA duplex d(CGCGCG) before soaking of CuCl2
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2023-03-13
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8oez: Crystal structure of the Z-DNA hexamer d(CGCGCG) with Iron(II) chloride
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2023-03-13
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8of0: Structure of the mammalian Pol II-SPT6-Elongin complex, Structure 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-03-13
Authors: Chen, Y., Kokic, G., Dienemann, C., Dybkov, O., Urlaub, H., Cramer, P.
PDB entry 8of1: Structure of ALDH5F1 from moss Physcomitrium patens in complex with NAD+ in the contracted conformation
Classification: OXIDOREDUCTASE
Source organism: Physcomitrium patens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-03-13
Authors: Morera, S., Kopecny, D., Vigouroux, A.
PDB entry 8of2: Trypanosoma brucei pteridine reductase 1 (TbPTR1) in complex with 2,4,6 triamminopyrimidine (TAP)
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2023-03-13
Authors: Tassone, G., Landi, G., Mangani, S., Pozzi, C.
PDB entry 8of3: Structure of the apoform of ALDEHYDE DEHYDROGENASE 5F1 (ALDH5F1) from the moss Physcomitrium patens
Classification: OXIDOREDUCTASE
Source organism: Physcomitrium patens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.348 Å
Deposited: 2023-03-13
Authors: Morera, S., Kopecny, D., Vigouroux, A.
PDB entry 8of4: Nucleosome Bound human SIRT6 (Composite)
Classification: GENE REGULATION
Source organism: Homo sapiens; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-03-13
Authors: Smirnova, E., Bignon, E., Schultz, P., Papai, G., Ben-Shem, A.
PDB entry 8of5: Crystal structure of Aurora A 122-403 C290A, N332A, Q335A, C393A bound to ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-03-14
Authors: Miles, J.A., Hammond, K.L.R., Bayliss, R.
PDB entry 8of6: Structure of YtoQ
Classification: UNKNOWN FUNCTION
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-03-14
Authors: Garbers, T.B., Neumann, P., Ficner, R.
PDB entry 8of7: Cyc15 Diels Alderase
Classification: LIGASE
Source organism: Streptomyces sp. NL15-2K
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2023-03-14
Authors: Back, C.R., Barringer, R.W.L., Zorn, K., Manzo-Ruiz, M., Race, P.R.
PDB entry 8of8: Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free)
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2023-03-14
Authors: Gravett, M.S.C., Klebl, D.P., Harlen, O.G., Read, D.J., Harris, S.A., Muench, S.P., Peckham, M.
PDB entry 8ofa: Crystal structure of human cathepsin L interacting with tosyl phenylalanyl chloromethyl ketone (TPCK)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-03-14
Authors: Falke, S., Lieske, J., Guenther, S., Ewert, W., Reinke, P.Y.A., Loboda, J., Karnicar, K., Usenik, A., Lindic, N., Sekirnik, A., Chapman, H.N., Hinrichs, W., Turk, D., Meents, A.
PDB entry 8ofb: Crystal Structure of T. maritima reverse gyrase with a minimal latch, hexagonal form
Classification: HYDROLASE
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2023-03-15
Authors: Klostermeier, D., Rasche, R., Mhaindarkar, V., Kummel, D., Rudolph, M.G.
PDB entry 8ofc: Structure of an i-motif domain with the cytosine analog 1,3-diaza-2-oxophenoxacione (tC) at neutral pH
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2023-03-15
Authors: Mir, B., Serrano-Chacon, I., Terrazas, M., Gandioso, A., Garavis, M., Orozco, M., Escaja, N., Gonzalez, C.
PDB entry 8ofd: Crystal structure of beta-conglutin from Lupinus albus refined to 2.81 A
Classification: ALLERGEN
Source organism: Lupinus albus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2023-03-15
Authors: Dolot, R.M., O'Sullivan, C.K., Jauset-Rubio, M.
PDB entry 8ofe: E.coli Peptide Deformylase with bound inhibitor
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-03-15
Authors: Kirschner, H., Stoll, R., Hofmann, E.
PDB entry 8off: Structure of BARD1 ARD-BRCTs in complex with H2AKc15ub nucleosomes (Map1)
Classification: DNA BINDING PROTEIN
Source organism: Felis catus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-03-15
Authors: Foglizzo, M., Burdett, H., Wilson, M.D., Zeqiraj, E.
PDB entry 8ofg: Streptococcus pneumoniae CdaA in complex with c-di-amp
Classification: TRANSFERASE
Source organism: Streptococcus pneumoniae R6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-03-15
Authors: Garbers, T.B., Neumann, P., Ficner, R.
PDB entry 8ofh: Streptococcus pneumoniae CdaA
Classification: TRANSFERASE
Source organism: Streptococcus pneumoniae R6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2023-03-15
Authors: Garbers, T.B., Neumann, P., Ficner, R.
PDB entry 8ofi: Ivabradine bound to HCN4 channel
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-03-15
Authors: Saponaro, A., Chaves-Sanjuan, A., Sharifzadeh, A.S., Clarke, O.B., Marabelli, C., Bolognesi, M., Thiel, G., Moroni, A.
PDB entry 8ofj: Mycoplasma pneumoniae CdaM
Classification: TRANSFERASE
Source organism: Mycoplasmoides pneumoniae 19294
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-03-15
Authors: Garbers, T.B., Neumann, P., Ficner, R.
PDB entry 8ofk: Crystal structure of the cysteine-rich Gallus gallus urate oxidase in complex with the 8-azaxanthine inhibitor under reducing conditions (space group C 2 2 21)
Classification: OXIDOREDUCTASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.713 Å
Deposited: 2023-03-15
Authors: Di Palma, M., Chegkazi, M., Bui, S., Mori, G., Percudani, R., Steiner, R.A.
PDB entry 8ofl: Coproporphyrin III - LmCpfC complex soaked 4min with Fe2+
Classification: METAL BINDING PROTEIN
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-03-16
Authors: Gabler, T., Hofbauer, S.
PDB entry 8ofm: Structure of the ALDEHYDE DEHYDROGENASE 5F1 (ALDH5F1) from the moss Physcomitrium patens in complex with NAD in an extended conformation
Classification: OXIDOREDUCTASE
Source organism: Physcomitrium patens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.831 Å
Deposited: 2023-03-16
Authors: Morera, S., Kopecny, D., Vigouroux, A.
PDB entry 8ofn: Structure of the yellow fever virus (Asibi strain) dimeric envelope protein
Classification: VIRAL PROTEIN
Source organism: Yellow fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.48 Å
Deposited: 2023-03-16
Authors: Covernton, E., Vaney, M.C., Barba-Spaeth, G., Rey, F.A.
PDB entry 8ofo: Structure of Enterococcus faecium CdaA
Classification: TRANSFERASE
Source organism: Enterococcus faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-03-16
Authors: Garbers, T.B., Neumann, P., Ficner, R.
PDB entry 8ofp: Human adenovirus type 24 fiber-knob protein
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 24
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-03-16
Authors: Rizkallah, P.J., Parker, A.L., Mundy, R.M., Baker, A.T.
PDB entry 8ofq: Human adenovirus type 25 fiber-knob protein
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 25
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-03-16
Authors: Rizkallah, P.J., Parker, A.L., Mundy, R.M., Baker, A.T.
PDB entry 8ofr: Human adenovirus type 25 fiber-knob protein complexed with sialic acid
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 25
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2023-03-16
Authors: Rizkallah, P.J., Parker, A.L., Mundy, R.M., Baker, A.T.
PDB entry 8ofs: Human adenovirus type 30 fiber-knob protein complexed with sialic acid
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 30
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2023-03-16
Authors: Rizkallah, P.J., Parker, A.L., Mundy, R.M., Baker, A.T.
PDB entry 8oft: Human adenovirus type 32 fiber-knob protein
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 32
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-03-16
Authors: Rizkallah, P.J., Parker, A.L., Mundy, R.M., Baker, A.T.
PDB entry 8ofu: Human adenovirus type 53 fiber-knob protein
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 53
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-03-16
Authors: Rizkallah, P.J., Parker, A.L., Mundy, R.M., Baker, A.T.
PDB entry 8ofv: Human adenovirus type 53 fiber-knob protein complexed with sialic acid
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 53
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-03-16
Authors: Rizkallah, P.J., Parker, A.L., Mundy, R.M., Baker, A.T.
PDB entry 8ofw: Crystal structure of the full-length dihydroorotate dehydrogenase from Mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2023-03-17
Authors: Alberti, M., Ferraris, D.M., Miggiano, R.
PDB entry 8ofx: Molecular Mechanism of trypanosomal AQP2
Classification: MEMBRANE PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-03-17
Authors: Weyand, S.N., Matusevicius, M., Yamashita, K.
PDB entry 8ofy: Molecular Mechanism of trypanosomal AQP2
Classification: MEMBRANE PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-03-17
Authors: Weyand, S.N., Matusevicius, M., Yamashita, K.
PDB entry 8ofz: Molecular Mechanism of trypanosomal AQP2
Classification: MEMBRANE PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-03-17
Authors: Weyand, S.N., Matusevicius, M., Yamashita, K.
PDB entry 8og0: Crystal structure of MJF14-6-4-2 Fab fragment in complex with epitope peptide
Classification: IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.712 Å
Deposited: 2023-03-17
Authors: Tars, K., Lieknina, I.
PDB entry 8og1: Exostosin-like 3 apo enzyme
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2023-03-17
Authors: Sammon, D., Hohenester, E.
PDB entry 8og2: Crystal structure of CREBBP histone acetyltransferase domain in complex with Coenzyme A
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2023-03-17
Authors: Mechaly, A.E., Zhang, W., Haouz, A., Green, M., Rodrigues-Lima, F.
PDB entry 8og3: E. coli NfsB triple mutant T41L/N71S/F124T bound to citrate
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2023-03-17
Authors: Day, M.A., White, S.A., Hyde, E.I., Searle, P.F.
PDB entry 8og4: Exostosin-like 3 UDP complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-03-18
Authors: Sammon, D., Hohenester, E.
PDB entry 8og5: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-03-19
Authors: Schroeder, M., Vulpetti, A., Renatus, M.
PDB entry 8og6: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.245 Å
Deposited: 2023-03-19
Authors: Schroeder, M., Vulpetti, A., Renatus, M.
PDB entry 8og7: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2023-03-19
Authors: Schroeder, M., Vulpetti, A., Renatus, M.
PDB entry 8og8: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2023-03-19
Authors: Schroeder, M., Vulpetti, A., Renatus, M.
PDB entry 8og9: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 4
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.945 Å
Deposited: 2023-03-19
Authors: Schroeder, M., Vulpetti, A., Renatus, M.
PDB entry 8oga: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-03-19
Authors: Schroeder, M., Vulpetti, A., Renatus, M.
PDB entry 8ogb: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 8
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2023-03-19
Authors: Schroeder, M., Vulpetti, A., Renatus, M.
PDB entry 8ogc: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 11
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2023-03-19
Authors: Schroeder, M., Vulpetti, A., Renatus, M.
PDB entry 8ogd: Structure of zinc(II) double mutant human carbonic anhydrase II bound to thiocyanate
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-03-20
Authors: Silva, J.M., Cerofolini, L., Carvalho, A.L., Ravera, E., Fragai, M., Parigi, G., Macedo, A.L., Geraldes, C.F.G.C., Luchinat, C.
PDB entry 8oge: Structure of cobalt(II) substituted double mutant human carbonic anhydrase II bound to thiocyanate
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2023-03-20
Authors: Silva, J.M., Cerofolini, L., Carvalho, A.L., Ravera, E., Fragai, M., Parigi, G., Macedo, A.L., Geraldes, C.F.G.C., Luchinat, C.
PDB entry 8ogf: Human Carbonic Anhydrase II in complex with 4-(((1-(3-((3aR,7R,7aS)-7-hydroxy-2,2-dimethyltetrahydro-[1,3]dioxolo[4,5-c]pyridin-5(4H)-yl)propyl)-1H-1,2,3-triazol-4-yl)methyl)amino)benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.321 Å
Deposited: 2023-03-20
Authors: Angeli, A., Ferraroni, M.
PDB entry 8ogg: Crystal structure of FutA after an accumulated dose of 5 kGy
Classification: METAL BINDING PROTEIN
Source organism: Prochlorococcus marinus subsp. pastoris str. CCMP1986
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-03-20
Authors: Bolton, R., Tews, I.
PDB entry 8ogh: Truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Mycobacterium tuberculosis with butylacetylphosphonate (BAP) bound
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-03-20
Authors: Gawriljuk, O.V., Oerlemans, R., Groves, R.M.
PDB entry 8ogi: Structure of native human eosinophil peroxidase
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.547 Å
Deposited: 2023-03-20
Authors: Pfanzagl, V., Obinger, C.
PDB entry 8ogj: Structure of Candida albicans 80S ribosome in complex with mefloquine
Classification: RIBOSOME
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-03-20
Authors: Kolosova, O., Zgadzay, Y., Stetsenko, A., Guskov, A., Yusupov, M.
PDB entry 8ogk: Crystal structure of CdaA from Bacillus subtilis co-crystallized with DMSO
Classification: UNKNOWN FUNCTION
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2023-03-20
Authors: Garbers, T.B., Neumann, P., Ficner, R.
PDB entry 8ogm: Crystal structure of CdaA from Bacillus subtilis
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-03-20
Authors: Garbers, T.B., Neumann, P., Weiss, M.S., Wollenhaupt, J., Ficner, R.
PDB entry 8ogn: PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A09
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2023-03-20
Authors: Garbers, T.B., Neumann, P., Wollenhaupt, J., Weiss, M.S., Ficner, R.
PDB entry 8ogo: PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2023-03-20
Authors: Garbers, T.B., Neumann, P., Wollenhaupt, J., Weiss, M.S., Ficner, R.
PDB entry 8ogp: PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B03
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2023-03-20
Authors: Garbers, T.B., Neumann, P., Wollenhaupt, J., Weiss, M.S., Ficner, R.
PDB entry 8ogq: PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-03-20
Authors: Garbers, T.B., Neumann, P., Wollenhaupt, J., Weiss, M.S., Ficner, R.
PDB entry 8ogr: PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-03-20
Authors: Garbers, T.B., Neumann, P., Wollenhaupt, J., Weiss, M.S., Ficner, R.
PDB entry 8ogs: PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B08
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-03-20
Authors: Garbers, T.B., Neumann, P., Wollenhaupt, J., Weiss, M.S., Ficner, R.
PDB entry 8ogt: PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C04
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-20
Authors: Garbers, T.B., Neumann, P., Wollenhaupt, J., Weiss, M.S., Ficner, R.