LiteFold/PDB huggingface dataset:
PDB entry 8pu9: Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle -10 degrees
Classification: VIRAL PROTEIN
Source organism: Human T-cell leukemia virus type I
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-07-17
Authors: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., Porley, D., Mansky, L.M., Dick, R.A., Schur, F.K.M.
PDB entry 8pua: Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle -05 degrees
Classification: VIRAL PROTEIN
Source organism: Human T-cell leukemia virus type I
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-07-17
Authors: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., Porley, D., Mansky, L.M., Dick, R.A., Schur, F.K.M.
PDB entry 8pub: Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle 0 degrees
Classification: VIRAL PROTEIN
Source organism: Human T-cell leukemia virus type I
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-07-17
Authors: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., Porley, D., Mansky, L.M., Dick, R.A., Schur, F.K.M.
PDB entry 8puc: Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle 05 degrees
Classification: VIRAL PROTEIN
Source organism: Human T-cell leukemia virus type I
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-07-17
Authors: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., Porley, D., Mansky, L.M., Dick, R.A., Schur, F.K.M.
PDB entry 8pud: Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle 10 degrees
Classification: VIRAL PROTEIN
Source organism: Human T-cell leukemia virus type I
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2023-07-17
Authors: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., Porley, D., Mansky, L.M., Dick, R.A., Schur, F.K.M.
PDB entry 8pue: Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle 15 degrees
Classification: VIRAL PROTEIN
Source organism: Human T-cell leukemia virus type I
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.9 Å
Deposited: 2023-07-17
Authors: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., Porley, D., Mansky, L.M., Dick, R.A., Schur, F.K.M.
PDB entry 8puf: Structure of immature HTLV-1 CA-NTD from in vitro assembled MA126-CANC tubes: axis angle 20 degrees
Classification: VIRAL PROTEIN
Source organism: Human T-cell leukemia virus type I
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2023-07-17
Authors: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., Porley, D., Mansky, L.M., Dick, R.A., Schur, F.K.M.
PDB entry 8pug: Structure of the immature HTLV-1 CA lattice from full-length Gag VLPs: CA-NTD refinement
Classification: VIRAL PROTEIN
Source organism: Human T-cell leukemia virus type I
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.9 Å
Deposited: 2023-07-17
Authors: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., Porley, D., Mansky, L.M., Dick, R.A., Schur, F.K.M.
PDB entry 8puh: Structure of the immature HTLV-1 CA lattice from full-length Gag VLPs: CA-CTD refinement
Classification: VIRAL PROTEIN
Source organism: Human T-cell leukemia virus type I
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2023-07-17
Authors: Obr, M., Percipalle, M., Chernikova, D., Yang, H., Thader, A., Pinke, G., Porley, D., Mansky, L.M., Dick, R.A., Schur, F.K.M.
PDB entry 8pui: human PHOX2B C-terminal domain including the polyA fragment at 298K
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-07-17
Authors: Anton, R., Trevino, M.A., Pantoja-Uceda, D., Felix, S., Babu, M., Cabrita, E.J., Zweckstetter, M., Tinnefeld, P., Vera, A.M., Oroz, J.
PDB entry 8puj: The surface-exposed lipo-protein of BtuG2 in complex with cyanocobalamin.
Classification: TRANSPORT PROTEIN
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-07-17
Authors: Whittaker, J., Martinez-Felices, J.M., Guskov, A., Slotboom, D.J.
PDB entry 8puk: ChiLob 7/4 H2 HC-T219C/C224S Kappa LC-E123C/C214S F(ab')2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.671 Å
Deposited: 2023-07-17
Authors: Elliott, I.G., Fisher, H., Tews, I.
PDB entry 8pul: ChiLob 7/4 H2 HC-K223C/C224S Kappa LC-C214S F(ab')2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-07-17
Authors: Elliott, I., Fisher, H., Tews, I.
PDB entry 8pum: Tha1 L-threonine aldolase (mouse), monoclinic form (C2)
Classification: LYASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-07-17
Authors: Battistutta, R., Fornasier, E., Giachin, G.
PDB entry 8pun: Old Yellow Enzyme from the thermophilic Ferrovum sp. JA12
Classification: OXIDOREDUCTASE
Source organism: Ferrovum sp. JA12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-07-17
Authors: Polidori, N., Gruber, K.
PDB entry 8puo: Structural determinants of cold-activity and glucose tolerance of a family 1 glycoside hydrolase (GH1) from Antarctic Marinomonas Ef 1
Classification: HYDROLASE
Source organism: Marinomonas sp. ef1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-07-17
Authors: Gourlay, L.J., Nardini, M.
PDB entry 8pup: Influenza A/California/07/2009(H1N1) endonuclease in complex with purpurogallin-like compound
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/California/07/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-07-17
Authors: Kotacka, T., Radilova, K.
PDB entry 8puq: MetHemoglobin structure from serial synchrotron crystallography with fixed target
Classification: OXYGEN TRANSPORT
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-07-17
Authors: Bjelcic, M., Sigfridsson Clauss, K., Aurelius, O., Milas, M., Nan, J., Ursby, T.
PDB entry 8pur: DexyHemoglobin structure from serial synchrotron crystallography with fixed target
Classification: OXYGEN TRANSPORT
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-07-17
Authors: Bjelcic, M., Sigfridsson Clauss, K., Aurelius, O., Milas, M., Nan, J., Ursby, T.
PDB entry 8pus: Tha1 L-threonine aldolase (mouse), orthorhombic form (F222)
Classification: LYASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2023-07-17
Authors: Battistutta, R., Fornasier, E., Giachin, G.
PDB entry 8put: IF5A in complex with Deoxyhypusine synthase
Classification: TRANSLATION
Source organism: Sulfolobus islandicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-07-17
Authors: Ennifar, E., D'agostino, M.
PDB entry 8puu: Giardia intestinalis deoxyadenosine kinase forms a functional tetramer
Classification: TRANSFERASE
Source organism: Giardia intestinalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-07-17
Authors: Ranjbarian, F., Rafie, K., Shankar, K., Krakovka, S., Svaerd, S., Carlson, L.-A., Hofer, A.
PDB entry 8puv: Trimeric prM/E spike of Tick-borne encephalitis virus immature particle
Classification: VIRUS
Source organism: Tick-borne encephalitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-07-17
Authors: Fuzik, T., Plevka, P., Smerdova, L., Novacek, J.
PDB entry 8puw: Chaetomium thermophilum Las1-Grc3-complex
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pux: TEAD2 with a covalent inhibitor
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-07-17
Authors: Guichou, J.F., Gelin, M., Allemand, F.
PDB entry 8puy: TEAD2 with a covalent inhibitor
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-07-17
Authors: Guichou, J.F., Gelin, M., Allemand, F.
PDB entry 8puz: Crystal structure of tropomyosin (Cdc8) cables, Conformer 1
Classification: STRUCTURAL PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-07-17
Authors: Reinke, P.Y.A., Zahn, M., Fedorov, R., Manstein, D.J.
PDB entry 8pv0: Crystal structure of tropomyosin (Cdc8) cables, Conformers 2 and 3
Classification: STRUCTURAL PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-07-17
Authors: Reinke, P.Y.A., Zahn, M., Fedorov, R., Manstein, D.J.
PDB entry 8pv1: Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pv2: Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pv3: Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pv4: Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pv5: Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pv6: Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pv7: Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.12 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pv8: Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pv9: Structure of DPS determined by cryoEM at 100 keV
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pva: Structure of bacterial ribosome determined by cryoEM at 100 keV
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pvb: Structure of GABAAR determined by cryoEM at 100 keV
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pvc: Structure of mouse heavy-chain apoferritin determined by cryoEM at 100 keV
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pvd: Structure of catalase determined by cryoEM at 100 keV
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pve: Structure of AHIR determined by cryoEM at 100 keV
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pvf: Structure of GAPDH determined by cryoEM at 100 keV
Classification: OXIDOREDUCTASE
Source organism: Cryptosporidium parvum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pvg: Structure of E. coli glutamine synthetase determined by cryoEM at 100 keV
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pvh: Structure of human apo ALDH1A1 determined by cryoEM at 100 keV
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pvi: Structure of PaaZ determined by cryoEM at 100 keV
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pvj: Structure of lumazine synthase determined by cryoEM at 100 keV
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-07-17
Authors: McMullan, G., Naydenova, K., Mihaylov, D., Peet, M.J., Wilson, H., Yamashita, K., Dickerson, J.L., Chen, S., Cannone, G., Lee, Y., Hutchings, K.A., Gittins, O., Sobhy, M., Wells, T., El-Gomati, M.M., Dalby, J., Meffert, M., Schulze-Briese, C., Henderson, R., Russo, C.J.
PDB entry 8pvk: Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pvl: Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2023-07-17
Authors: Thoms, M., Cheng, J., Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 8pvm: formaldehyde-inhibited [FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant C299D
Classification: OXIDOREDUCTASE
Source organism: Clostridium pasteurianum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2023-07-18
Authors: Duan, J., Hofmann, E., Happe, T.
PDB entry 8pvo: Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric compound FG5
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-07-18
Authors: Kraemer, A., Greco, F., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8pvp: Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with allosteric compound FGJG18
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-07-18
Authors: Kraemer, A., Greco, F., Gerninghaus, J., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8pvq: Crystal Structure of Human PTX3 C-terminal domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-07-18
Authors: Levy, C.W.
PDB entry 8pvr: Cryo-EM structure of horse Nhe9 bound to PI(3,5)P2
Classification: TRANSPORT PROTEIN
Source organism: Equus caballus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2023-07-18
Authors: Kokane, S., Meier, P., Gulati, A., Delemotte, L., Drew, D.
PDB entry 8pvs: Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Classification: HYDROLASE
Source organism: Akkermansia muciniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2023-07-18
Authors: Jensen, M., Abou Hachem, M., Morth, J.P.
PDB entry 8pvt: Manganese-dependent transcriptional repressor DR2539 complexed with cadmium (SAD 7 keV)
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-07-18
Authors: Mota, C., De Sanctis, D.
PDB entry 8pvu: Cryo-EM structure of DHS-ERK2 complex with 1:1 stoichiometry refined in C1 symmetry
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-07-18
Authors: Kochanowski, P., Biela, A.P., Grudnik, P.
PDB entry 8pvv: Archaeoglobus fulgidus AfAgo complex with AfAgo-N protein (fAfAgo) bound with 30 nt RNA guide and 51 nt DNA target
Classification: DNA BINDING PROTEIN
Source organism: Archaeoglobus fulgidus; Archaeoglobus fulgidus DSM 8774; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2023-07-18
Authors: Manakova, E.N., Zaremba, M., Pocevicuite, R., Golovinas, E., Sasnauskas, G., Zagorskaite, E., Silanskas, A.
PDB entry 8pvw: Structure of a short E. coli adenylate kinase in complex with Ap5A
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-07-18
Authors: Rodriguez, J.A., Wolf Watz, M., Sauer-Eriksson, E.
PDB entry 8pvx: Structure of the Lifeact13-F-actin complex
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2023-07-18
Authors: Belyy, A., Raunser, S.
PDB entry 8pvy: Cryo-EM structure of the human BRISC dimer complex bound to compound FX-171-C
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2023-07-18
Authors: Chandler, F., Zeqiraj, E.
PDB entry 8pvz: Manganese-dependent transcriptional repressor DR2539 complexed with cadmium
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-07-18
Authors: Mota, C., De Sanctis, D.
PDB entry 8pw0: Manganese-dependent transcriptional repressor DR2539 complexed with manganese and bound to dr1709 promotor
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus radiodurans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-07-18
Authors: Mota, C., De Sanctis, D.
PDB entry 8pw1: Structure of human UCHL1 in complex with CG341 inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-07-19
Authors: Grethe, C., Gersch, M.
PDB entry 8pw2: Protein p6 from bacteriophage phi29, C-terminal delta31 truncated version
Classification: DNA BINDING PROTEIN
Source organism: Salasvirus phi29
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2023-07-19
Authors: Alcorlo Pages, M., Hermoso Dominguez, J.
PDB entry 8pw3: Mycobacterium smegmatis inosine monophosphate dehydrogenase (IMPDH) apo form
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.507 Å
Deposited: 2023-07-19
Authors: Bulvas, O., Kouba, T., Pichova, I.
PDB entry 8pw4: Protein p6 from bacteriophage phi29, C-terminal delta20 truncated version
Classification: DNA BINDING PROTEIN
Source organism: Salasvirus phi29
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-07-19
Authors: Alcorlo Pages, M., Hermoso Dominguez, J.
PDB entry 8pw5: CS respirasome from murine liver
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-07-19
Authors: Vercellino, I., Sazanov, L.A.
PDB entry 8pw6: C respirasome from murine liver
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-07-19
Authors: Vercellino, I., Sazanov, L.A.
PDB entry 8pw7: A respirasome from murine liver
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-07-19
Authors: Vercellino, I., Sazanov, L.A.
PDB entry 8pw8: Crystal structure of the human METTL3-METTL14 in complex with a bisubstrate analogue (BA2)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-07-19
Authors: Bedi, R.K., Etheve-Quelquejeu, M., Caflisch, A.
PDB entry 8pw9: Crystal structure of the human METTL3-METTL14 in complex with a bisubstrate analogue (BA1)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-07-19
Authors: Bedi, R.K., Etheve-Quelquejeu, M., Caflisch, A.
PDB entry 8pwa: Crystal structure of the human METTL3-METTL14 in complex with a bisubstrate analogue (BA4)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-07-19
Authors: Bedi, R.K., Etheve-Quelquejeu, M., Caflisch, A.
PDB entry 8pwb: Crystal structure of the human METTL3-METTL14 in complex with a bisubstrate analogue (BA6)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-07-19
Authors: Bedi, R.K., Etheve-Quelquejeu, M., Caflisch, A.
PDB entry 8pwc: Crystal structure of MDM2 with Brigimadlin
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.461 Å
Deposited: 2023-07-20
Authors: Bader, G., Wolkerstorfer, B.
PDB entry 8pwd: Crystal structure of VDR in complex Des-C-Ring and Aromatic-D-Ring analog 3c
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-07-20
Authors: Rochel, N.
PDB entry 8pwe: Crystal structure of VDR complex with Novel Des-C-Ring and Aromatic-D-Ring analog 3a
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-07-20
Authors: Rochel, N.
PDB entry 8pwf: crystal structure of VDR in complex with Des-C-Ring and Aromatic-D-Ring analog 2
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-07-20
Authors: rochel, N.
PDB entry 8pwg: Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 90-120 milliseconds time-bin
Classification: SIGNALING PROTEIN
Source organism: Natronomonas pharaonis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-07-20
Authors: Ortolani, G., Bosman, R., Branden, G., Neutze, R.
PDB entry 8pwh: Atomic structure and conformational variability of the HER2-Trastuzumab-Pertuzumab complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-07-20
Authors: Ruedas, R., Vuillemot, R., Tubiana, T., Winter, J.M., Pieri, L., Arteni, A.A., Samson, C., Jonic, J., Mathieu, M., Bressanelli, S.
PDB entry 8pwi: Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 60-90 milliseconds time-bin
Classification: SIGNALING PROTEIN
Source organism: Natronomonas pharaonis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-07-20
Authors: Bosman, R., Ortolani, G., Branden, G., Neutze, R.
PDB entry 8pwj: Light structure of sensory rhodopsin-II solved by serial millisecond crystallography. 30-60 milliseconds time-bin
Classification: SIGNALING PROTEIN
Source organism: Natronomonas pharaonis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-07-20
Authors: Bosman, R., Ortolani, G., Branden, G., Neutze, R.
PDB entry 8pwk: human HINT1 in complex with compound AT8003
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.095 Å
Deposited: 2023-07-20
Authors: Zimberger, C., Canard, B., Ferron, F.
PDB entry 8pwl: Cryo-EM structure of a full-length HACE1 dimer
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.73 Å
Deposited: 2023-07-20
Authors: Duering, J., Wolter, M., Dienemann, C., Lorenz, S.
PDB entry 8pwm: Crystal structure of VDR in complex with Des-C-Ring and Aromatic-D-Ring analog 3b
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-07-20
Authors: Rochel, N.
PDB entry 8pwn: Structure of A2A adenosine receptor A2AR-StaR2-bRIL, solved at wavelength 2.75 A
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-07-20
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Romano, M., Moraes, I., Wagner, A.
PDB entry 8pwo: Hepatitis B core protein with bound Geraniol
Classification: VIRUS LIKE PARTICLE
Source organism: Hepatitis B virus ayw/France/Tiollais/1979
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-07-21
Authors: Makbul, C., Khayenko, V., Maric, M.H., Bottcher, B.
PDB entry 8pwp: Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 0-30 milliseconds time-bin
Classification: SIGNALING PROTEIN
Source organism: Natronomonas pharaonis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2023-07-21
Authors: Ortolani, G., Bosman, R., Branden, G., Neutze, R.
PDB entry 8pwq: Light structure of sensory rhodopsin-II solved by serial millisecond crystallography 120-150 milliseconds time-bin
Classification: SIGNALING PROTEIN
Source organism: Natronomonas pharaonis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-07-21
Authors: Bosman, R., Ortolani, G., Branden, G., Neutze, R.
PDB entry 8pwr: TINA-conjugated antiparallel DNA triplex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2023-07-21
Authors: Garavis, M., Edwards, P.J.B., Serrano-Chacon, I., Doluca, O., Filichev, V.V., Gonzalez, C.
PDB entry 8pws: Dye-decolourising peroxidase DtpB (56 kGy)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-07-21
Authors: Lucic, M., Worrall, J.A.R., Hough, M.A., Owen, R.L., Strange, R.W.
PDB entry 8pwt: Solution structure of the peptide U11-MYRTX-Tb1a from the venom of the ant Tetramorium bicarinatum
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2023-07-21
Authors: Jouvensal, L., Paquet, F., Loth, K.
PDB entry 8pwu: PfRH5 bound to monoclonal antibody MAD10-255
Classification: CELL CYCLE
Source organism: Homo sapiens; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 3.148 Å
Deposited: 2023-07-21
Authors: Farrell, B., Higgins, M.K.
PDB entry 8pwv: PfRH5 bound to monoclonal antibody MAD8-502
Classification: CELL ADHESION
Source organism: Homo sapiens; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2023-07-21
Authors: Farrell, B., Higgins, M.K.
PDB entry 8pww: PfRH5 bound to monoclonal antibody MAD8-151
Classification: CELL ADHESION
Source organism: Homo sapiens; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.945 Å
Deposited: 2023-07-21
Authors: Farrell, B., Higgins, M.K.
PDB entry 8pwx: PfRH5 bound to monoclonal antibody R5.008
Classification: CELL ADHESION
Source organism: Homo sapiens; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-07-21
Authors: Farrell, B., Higgins, M.K.
PDB entry 8pwy: Dye-decolourising peroxidase DtpB (112 kGy)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-07-21
Authors: Lucic, M., Worrall, J.A.R., Hough, M.A., Owen, R.L., Strange, R.W.
PDB entry 8pwz: Crystal Structure of (3R)-hydroxyacyl-ACP dehydratase HadBD from Mycobacterium tuberculosis
Classification: LYASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.00197 Å
Deposited: 2023-07-22
Authors: Rima, J., Grimoire, Y., Bories, P., Bardou, F., Quemard, A., Bon, C., Mourey, L., Tranier, S.
PDB entry 8px0: Structure of ribonuclease A, solved at wavelength 2.75 A
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-07-22
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Romano, M., Beis, K., Wagner, A.
PDB entry 8px1: Structure of salmonella effector SseK3, solved at wavelength 2.75 A
Classification: TOXIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-07-22
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C.M., Esposito, D., Rittinger, K., Wagner, A.
PDB entry 8px2: C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 1,3-dimethyl-5-(1-((tetrahydro-2H-pyran-4-yl)methyl)-1H-benzo[d]imidazol-2-yl)pyridin-2(1H)-one
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.622 Å
Deposited: 2023-07-22
Authors: Chung, C.W.
PDB entry 8px3: Hepatitis B core protein with bound P1dC
Classification: VIRUS LIKE PARTICLE
Source organism: Hepatitis B virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-07-22
Authors: Makbul, C., Khayenko, V., Maric, M.H., Bottcher, B.
PDB entry 8px4: Structure of the PAS domain code by the LIC_11128 gene from Leptospira interrogans serovar Copenhageni Fiocruz, solved at wavelength 3.09 A
Classification: UNKNOWN FUNCTION
Source organism: Leptospira interrogans serovar Copenhageni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-07-22
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Guzzo, C.R., Owens, R.J., Wagner, A.
PDB entry 8px5: Structure of the RNA recognition motif (RRM) of Seb1 from S. pombe., solved at wavelength 2.75 A
Classification: TRANSCRIPTION
Source organism: Schizosaccharomyces pombe 972h-
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-07-22
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Wittmann, S., Renner, M., Grimes, J.M., Wagner, A.
PDB entry 8px6: Hepatitis B core protein with bound SLLGRM-dimer
Classification: VIRUS LIKE PARTICLE
Source organism: Hepatitis B virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-07-22
Authors: Makbul, C., Khayenko, V., Maric, M.H., Bottcher, B.
PDB entry 8px7: Structure of Bacterial Multidrug Efflux transporter AcrB, solved at wavelength 3.02 A
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2023-07-22
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Qu, F., Beis, K., Wagner, A.
PDB entry 8px8: C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH (S)-5-(1-((1-acetylpiperidin-3-yl)methyl)-5-bromo-1H-benzo[d]imidazol-2-yl)-1,3-dimethylpyridin-2(1H)-one
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.603 Å
Deposited: 2023-07-22
Authors: Chung, C.W.
PDB entry 8px9: Structure of the antibacterial peptide ABC transporter McjD, solved at wavelength 2.75 A
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-07-22
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Bountra, K., Beis, K., Wagner, A.
PDB entry 8pxa: N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH (S)-5-(1-((1-(1-isopropylpiperidine-4-carbonyl)piperidin-3-yl)methyl)-1H-benzo[d]imidazol-2-yl)-1,3-dimethylpyridin-2(1H)-one
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-07-22
Authors: Chung, C.
PDB entry 8pxb: Cryo-EM structure of horse NHE9 with a extracellular loop
Classification: TRANSPORT PROTEIN
Source organism: Equus caballus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-07-23
Authors: Kokane, S., Meier, P., Matsuoka, R., Drew, D.
PDB entry 8pxc: Structure of Fap1, a domain of the accessory Sec-dependent serine-rich glycoprotein adhesin from Streptococcus oralis, solved at wavelength 3.06 A
Classification: CELL ADHESION
Source organism: Streptococcus oralis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.973 Å
Deposited: 2023-07-23
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Owen, C.D., Walsh, M.A., Wagner, A.
PDB entry 8pxd: Crystal structure of the C-terminal domain of Hh1412
Classification: OXIDOREDUCTASE
Source organism: Helicobacter hepaticus ATCC 51449
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-07-23
Authors: Wilk, P., Orlikowska, M., Roszczenko-Jasinska, P., Jagusztyn-Krynicka, E.K.
PDB entry 8pxe: Crystal structure of the N-terminal dimerisation domain of Hh1141
Classification: OXIDOREDUCTASE
Source organism: Helicobacter hepaticus ATCC 51449
Experimental method: X-RAY DIFFRACTION
Resolution: 3.23 Å
Deposited: 2023-07-23
Authors: Wilk, P., Roszczenko-Jasinska, P., Jagusztyn-Krynicka, E.K.
PDB entry 8pxf: Crystal structure of the full length Hh1412 Dsb homodimer.
Classification: OXIDOREDUCTASE
Source organism: Helicobacter hepaticus ATCC 51449
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2023-07-23
Authors: Wilk, P., Orlikowska, M., Roszczenko-Jasinska, P., Jagusztyn-Krynicka, E.K.
PDB entry 8pxg: Structure of Streptactin, solved at wavelength 2.75 A
Classification: PEPTIDE BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-07-23
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Vecchia, L., Jones, E.Y., Wagner, A.
PDB entry 8pxh: Structure of TauA from E. coli, solved at wavelength 2.375 A
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-07-23
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Qu, F., Beis, K., Wagner, A.
PDB entry 8pxi: Crystal structure of Endothiapepsin soaked with FRG283
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-07-23
Authors: Mueller, J.M., Eckelt, S., Klebe, G., Glinca, S.
PDB entry 8pxj: Structure of Whitewater Arroyo virus GP1 glycoprotein, solved at wavelength 2.75 A
Classification: VIRAL PROTEIN
Source organism: Mammarenavirus whitewaterense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-07-23
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Bowden, T.A., Wagner, A.
PDB entry 8pxk: Structure of NADH-DEPENDENT FERREDOXIN REDUCTASE, BPHA4, solved at wavelength 5.76 A
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas sp. KKS102
Experimental method: X-RAY DIFFRACTION
Resolution: 3.77 Å
Deposited: 2023-07-23
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Senda, M., Matsugaki, N., Kawano, Y., Wagner, A.
PDB entry 8pxl: Structure of NADH-DEPENDENT FERREDOXIN REDUCTASE, BPHA4, solved at wavelength 1.37 A
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas sp. KKS102
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-07-23
Authors: El Omari, K., Duman, R., Mykhaylyk, V., Orr, C., Senda, M., Matsugaki, N., Kawano, Y., Wagner, A.
PDB entry 8pxm: N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH (1R,1'R)-7,7'-(pentane-1,5-diylbis(oxy))bis(1,3-dimethyl-1,3-dihydro-2H-benzo[d]azepin-2-one)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.378 Å
Deposited: 2023-07-23
Authors: Chung, C.W.
PDB entry 8pxn: N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH (1R,1'R)-7,7'-(ethane-1,2-diylbis(oxy))bis(1,3-dimethyl-1,3-dihydro-2H-benzo[d]azepin-2-one)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.952 Å
Deposited: 2023-07-23
Authors: Chung, C.
PDB entry 8pxo: ABCG2 in complex with AZ99 and 5D3 Fab
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-07-23
Authors: Yu, Q., Kowal, J., Tajkhorshid, E., Altmann, K.H., Locher, K.P.
PDB entry 8pxp: Compound II structure of Y389F variant of A type dye-decolourising peroxidase DtpAa
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-07-24
Authors: Lucic, M., Thompson, A., Worrall, J.A.R., Hough, M.A.
PDB entry 8pxq: SFX Ferric structure of Y389F variant of A type dye-decolourising peroxidase DtpAa
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-07-24
Authors: Lucic, M., Worrall, J.A.R., Hough, M.A., Pfalzgraf, H.
PDB entry 8pxs: Short RNA binding to peptide amyloids
Classification: UNKNOWN FUNCTION
Experimental method: SOLID-STATE NMR
Deposited: 2023-07-24
Authors: Rout, S.K., Cadalbert, R., Schroder, N., Wiegand, T., Zehnder, J., Gampp, O., Guntert, P., Kringler, D., Kreutz, C., Knorlein, A., Hall, J., Greenwald, J., Riek, R.
PDB entry 8pxt: Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Classification: HYDROLASE
Source organism: Akkermansia muciniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-07-24
Authors: Jensen, M., Abou Hachem, M., Morth, J.P.
PDB entry 8pxu: Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Classification: HYDROLASE
Source organism: Akkermansia muciniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-07-24
Authors: Jensen, M., Abou Hachem, M., Morth, J.P.
PDB entry 8pxv: Targeting extended blood antigens by Akkermansia muciniphila enzymes unveils a missing link for generating universal donor blood
Classification: HYDROLASE
Source organism: Akkermansia muciniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-07-24
Authors: Weikum, J., Jensen, M., Abou Hachem, M., Morth, J.P.
PDB entry 8pxw: Structure of the WW domain tandem of PRPF40A
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-07-24
Authors: Martinez-Lumbreras, S., Sattler, M.
PDB entry 8pxx: Structure of the WW domain tandem of PRPF40A in complex with SF1
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-07-24
Authors: Martinez-Lumbreras, S., Sattler, M.
PDB entry 8pxy: Crystal structure of the transpeptidase LdtMt2 C354S mutant from Mycobacterium tuberculosis in complex with natural substrate
Classification: ANTIMICROBIAL PROTEIN
Source organism: Corynebacterium jeikeium; Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-07-24
Authors: de Munnik, M., Schofield, C.J.
PDB entry 8pxz: Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with natural substrate
Classification: ANTIMICROBIAL PROTEIN
Source organism: Corynebacterium jeikeium; Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-07-24
Authors: de Munnik, M., Schofield, C.J.
PDB entry 8py0: Sensor domain of Oscillibacter ruminantium chemoreceptor in complex with formate.
Classification: SIGNALING PROTEIN
Source organism: Oscillibacter ruminantium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-07-24
Authors: Gavira, J.A., Krell, T., Monteagudo-Cascales, E., Velando, F., Matilla, M.A., Martinez-Rodriguez, S.
PDB entry 8py1: Sensor domain of Asticcacaulis benevestitus chemoreceptor in complex with formate.
Classification: SIGNALING PROTEIN
Source organism: Asticcacaulis benevestitus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-07-24
Authors: Gavira, J.A., Krell, T., Monteagudo-Cascales, E., Velando, F., Matilla, M.A., Martinez-Rodriguez, S.
PDB entry 8py2: Cryo-EM structure of the human BRISC dimer complex bound to compound JMS-175-2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2023-07-24
Authors: Chandler, F., Zeqiraj, E.
PDB entry 8py3: Crystal structure of human Sirt2 in complex with a 1,2,4-oxadiazole based inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-07-24
Authors: Friedrich, F., Colcerasa, A., Einsle, O., Jung, M.
PDB entry 8py4: ABCG2 in complex with ko143 and 5D3 Fab
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-07-25
Authors: Yu, Q., Kowal, J., Tajkhorshid, E., Altmann, K.H., Locher, K.P.
PDB entry 8py5: Isopenicillin N synthase in complex with Fe and ACdV under anaerobic conditions
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-07-25
Authors: Rabe, P., Schofield, C.J.
PDB entry 8py6: Isopenicillin N synthase in complex with Fe and ACdV under anaerobic conditions
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2023-07-25
Authors: Rabe, P., Schofield, C.J.
PDB entry 8py7: Isopenicillin N synthase in complex with Fe, ACdV and O2 after 1s O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2023-07-25
Authors: Rabe, P., Schofield, C.J.
PDB entry 8py8: Isopenicillin N synthase in complex with Fe, ACdV and O2 after 2s O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2023-07-25
Authors: Rabe, P., Schofield, C.J.
PDB entry 8py9: Isopenicillin N synthase in complex with Fe, O2, ACdV or thioaldehyde after 3s O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-07-25
Authors: Rabe, P., Schofield, C.J.
PDB entry 8pya: Isopenicillin N synthase in complex with Fe, O2, ACdV or thioaldehyde after 4s O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-07-25
Authors: Rabe, P., Schofield, C.J.
PDB entry 8pyh: Crystal structure of the Orange Carotenoid Protein 2 (OCP2) from Crinalium epipsammum PCC 9333
Classification: PHOTOSYNTHESIS
Source organism: Crinalium epipsammum PCC 9333
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-07-25
Authors: Boyko, K.M., Varfolomeeva, L.A., Slonimskiy, Y.B., Maksimov, E.G., Popov, V.O., Sluchanko, N.N.
PDB entry 8pyi: Human IGF1R with inhibitor 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2023-07-25
Authors: Dreyer, M.K., Wang, J., Elkins, J.M.
PDB entry 8pyj: Human IGF1R with inhibitor 8
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.702 Å
Deposited: 2023-07-25
Authors: Dreyer, M.K., Wang, J., Elkins, J.M.
PDB entry 8pyk: Human IGF1R with inhibitor 47
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2023-07-25
Authors: Dreyer, M.K., Wang, J., Elkins, J.M.
PDB entry 8pyl: Human IGF1R with inhibitor 53
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.93 Å
Deposited: 2023-07-25
Authors: Dreyer, M.K., Wang, J., Elkins, J.M.
PDB entry 8pym: Human IGF1R with inhibitor 54
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.652 Å
Deposited: 2023-07-25
Authors: Dreyer, M.K., Wang, J., Elkins, J.M.