LiteFold/PDB huggingface dataset:
PDB entry 7ewx: Crystal structure of Ebinur Lake virus cap snatching endonuclease (P78A mutant)
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ewy: Crystal structure of Ebinur Lake virus cap snatching endonuclease (D79A mutant)
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ewz: Crystal structure of Ebinur Lake virus cap snatching endonuclease (D92A mutant)
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ex0: Crystal structure of Ebinur Lake virus cap snatching endonuclease (K108A mutant)
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ex1: Crystal structure of Ebinur Lake virus cap snatching endonuclease (Y109A mutant)
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ex2: Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with L-742,001 (methyl ester form)
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ex3: Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 3
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ex4: Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 5
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ex6: Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 11
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ex7: Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 16
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ex8: Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 27
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7ex9: Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 28
Classification: HYDROLASE
Source organism: Abbey lake orthobunyavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-05-26
Authors: Kuang, W., Hu, Z., Gong, P.
PDB entry 7exa: Structure of mumps virus nucleoprotein without C-arm
Classification: NUCLEAR PROTEIN
Source organism: Escherichia coli; Mumps virus (strain Jeryl-Lynn)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-05-26
Authors: Shen, Q., Shan, H., Zhang, N., Qin, Y.
PDB entry 7exb: DfgA-DfgB complex apo 2.4 angstrom
Classification: LYASE
Source organism: [Eubacterium] cellulosolvens 6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-05-26
Authors: Mori, T., Senda, M., Senda, T., Abe, I.
PDB entry 7exc: Crystal structure of T2R-TTL-1129A2 complex
Classification: CELL CYCLE
Source organism: Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-05-26
Authors: Yang, J.H., Yan, W.
PDB entry 7exd: Lasmiditan-bound serotonin 1F (5-HT1F) receptor-Gi protein complex
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-05-27
Authors: Huang, S., Xu, P., Jiang, Y., Xu, H.E.
PDB entry 7exe: Crystal structure of mouse 14-3-3zeta in complex with doubly phosphorylated ADAM22 peptide
Classification: SIGNALING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2021-05-27
Authors: Yan, L., Okatsu, K., Fukai, S.
PDB entry 7exf: Crystal structure of wild-type from Arabidopsis thaliana complexed with Galactose
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2021-05-27
Authors: Chuankhayan, P., Guan, H.H., Lin, C.C., Chen, N.C., Huang, Y.C., Yoshimura, M., Nakagawa, A., Lee, R.H., Chen, C.J.
PDB entry 7exg: Crystal structure of D383A mutant from Arabidopsis thaliana complexed with Galactose.
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-05-27
Authors: Chuankhayan, P., Guan, H.H., Lin, C.C., Chen, N.C., Huang, Y.C., Yoshimura, M., Nakagawa, A., Lee, R.H., Chen, C.J.
PDB entry 7exh: Crystal structure of D383A mutant from Arabidopsis thaliana complexed with Galactinol.
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2021-05-27
Authors: Chuankhayan, P., Guan, H.H., Lin, C.C., Chen, N.C., Huang, Y.C., Yoshimura, M., Nakagawa, A., Lee, R.H., Chen, C.J.
PDB entry 7exi: Crystal structure of the BTB domain human Keap1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2021-05-27
Authors: Padmanabhan, B., Deshmukh, P., Gopinath, K., Unni, S.
PDB entry 7exj: Crystal structure of alkaline alpha-galctosidase D383A mutant from Arabidopsis thaliana complexed with Raffinose
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2021-05-27
Authors: Chuankhayan, P., Guan, H.H., Lin, C.C., Chen, N.C., Huang, Y.C., Yoshimura, M., Nakagawa, A., Lee, R.H., Chen, C.J.
PDB entry 7exk: An AA9 LPMO of Ceriporiopsis subvermispora
Classification: OXIDOREDUCTASE
Source organism: Ceriporiopsis subvermispora (strain B)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2021-05-27
Authors: Nguyen, H., Kondo, K., Nagata, T., Katahira, M., Mikami, B.
PDB entry 7exm: The N-terminal crystal structure of SARS-CoV-2 NSP2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2021-05-27
Authors: Ma, J., Chen, Z.
PDB entry 7exo: Structure of legume lectin domain from Methanocaldococcus jannaschii in mannose bound form
Classification: SUGAR BINDING PROTEIN
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-05-28
Authors: Suguna, K., Khan, F.
PDB entry 7exp: Crystal structure of zebrafish TRAP1 with AMPPNP and MitoQ
Classification: CHAPERONE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.297 Å
Deposited: 2021-05-28
Authors: Lee, H., Yoon, N.G., Kang, B.H., Lee, C.
PDB entry 7exq: Crystal structure of alkaline alpha-galactosidase D383A mutant from Arabidopsis thaliana complexed with product-galactose and sucrose.
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-05-28
Authors: Chuankhayan, P., Guan, H.H., Lin, C.C., Chen, N.C., Huang, Y.C., Yoshimura, M., Nakagawa, A., Lee, R.H., Chen, C.J.
PDB entry 7exr: Crystal structure of alkaline alpha-galactosidase D383A mutant from Arabidopsis thaliana complexed with Stachyose.
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-05-28
Authors: Chuankhayan, P., Guan, H.H., Lin, C.C., Chen, N.C., Huang, Y.C., Yoshimura, M., Nakagawa, A., Lee, R.H., Chen, C.J.
PDB entry 7exs: Thermomicrobium roseum sarcosine oxidase mutant - S320R
Classification: OXIDOREDUCTASE
Source organism: Thermomicrobium roseum DSM 5159
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2021-05-28
Authors: Xin, Y., Shen, C., Tang, M.W., Shi, Y., Guo, Z.T., Gu, Z.H., Shao, J., Zhang, L.
PDB entry 7ext: Cryo-EM structure of cyanobacterial phycobilisome from Synechococcus sp. PCC 7002
Classification: PHOTOSYNTHESIS
Source organism: Synechococcus sp. PCC 7002
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-05-28
Authors: Zheng, L., Zheng, Z., Li, X., Wang, G., Zhang, K., Wei, P., Zhao, J., Gao, N.
PDB entry 7exu: GH127 beta-L-arabinofuranosidase HypBA1 E322Q mutant complexed with p-nitrophenyl beta-L-arabinofuranoside
Classification: HYDROLASE
Source organism: Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-05-28
Authors: Maruyama, S., Arakawa, T., Yamada, C., Fujita, K., Fushinobu, S.
PDB entry 7exv: GH127 beta-L-arabinofuranosidase HypBA1 covalently complexed with beta-L-arabinofuranoylamide
Classification: HYDROLASE
Source organism: Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-05-28
Authors: Sawano, K., Arakawa, T., Yamada, C., Fujita, K., Fushinobu, S.
PDB entry 7exw: GH127 beta-L-arabinofuranosidase HypBA1 covalently complexed with alpha-L-arabinofuranosylamide
Classification: HYDROLASE
Source organism: Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-05-28
Authors: Sawano, K., Arakawa, T., Yamada, C., Fujita, K., Fushinobu, S.
PDB entry 7exx: The structure of DndG
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-05-28
Authors: Wu, D., Wang, L.
PDB entry 7exy: T-hairpin structure found in the RNA element involved in the piRNA biogenesis
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2021-05-29
Authors: Takase, N., Kawai, G.
PDB entry 7exz: DgpB-DgpC complex apo 2.5 angstrom
Classification: LYASE
Source organism: human intestinal bacterium PUE
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-05-29
Authors: Mori, T., Senda, M., Senda, T., Abe, I.
PDB entry 7ey0: Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-813 Fab and BD-744 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-05-29
Authors: Du, S., Xiao, J.
PDB entry 7ey1: Bifunctional xylosidase/glucosidase LXYL with intermediate substrate xylose
Classification: HYDROLASE
Source organism: Lentinula edodes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2021-05-29
Authors: Gong, W.M., Yang, L.Y.
PDB entry 7ey2: Bifunctional xylosidase/glucosidase LXYL D300N mutant with intermediate substrate xylose
Classification: HYDROLASE
Source organism: Lentinula edodes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2021-05-29
Authors: Gong, W.M., Yang, L.Y.
PDB entry 7ey3: Double cysteine mutations in T1 lipase
Classification: HYDROLASE
Source organism: Geobacillus zalihae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2021-05-29
Authors: Hamdan, S.H., Leow, T.C., Yahaya, N.M., Ali, M.S.M., Jonet, M.A., Mohamad Aris, S.N.A., Maiangwa, J.
PDB entry 7ey4: Local CryoEM of the SARS-CoV-2 S6PV2 in complex with BD-667
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2021-05-29
Authors: Liu, P.L.
PDB entry 7ey5: Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-771 Fab and BD-821 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-05-29
Authors: Zhang, Z.Y.
PDB entry 7ey6: The portal protein (GP8) of bacteriophage T7
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-05-30
Authors: Liu, H.R., Chen, W.Y.
PDB entry 7ey7: bacteriophage T7 tail complex
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-05-30
Authors: Liu, H.R., Chen, W.Y.
PDB entry 7ey8: portal
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-05-30
Authors: Liu, H.R., Chen, W.Y.
PDB entry 7ey9: tail proteins
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-05-30
Authors: Liu, H.R., Chen, W.Y.
PDB entry 7eya: Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-804 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2021-05-30
Authors: Du, S., Xiao, J.
PDB entry 7eyb: core proteins
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-05-30
Authors: Liu, H.R., Chen, W.Y.
PDB entry 7eyc: Crystal structure of Tau and acetylated tau peptide antigen
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2021-05-30
Authors: Hong, M., Park, J.
PDB entry 7eyd: Cryo-EM structure of cyanobacterial phycobilisome from Anabaena sp. PCC 7120
Classification: PHOTOSYNTHESIS
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-05-30
Authors: Zheng, L., Zheng, Z., Li, X., Wang, G., Zhang, K., Wei, P., Zhao, J., Gao, N.
PDB entry 7eye: Cryo-EM (SPA) structure of Nup155 N-terminus (19-863) at 5.1 Angstrom resolution
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; Recombinant vesicular stomatitis Indiana virus rVSV-G/GFP
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.1 Å
Deposited: 2021-05-30
Authors: Niranjan, S.
PDB entry 7eyf: Cryo-EM (SPA) structure of human Nup155 C-terminus (864-1337) at 5.3 Angstroms resolution
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.3 Å
Deposited: 2021-05-30
Authors: Niranjan, S.
PDB entry 7eyi: Crystal structure of ZBTB7A in complex with gamma-globin -200 sequence element with C-194A mutation
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.401 Å
Deposited: 2021-05-31
Authors: Yang, Y., Shi, Y.Y.
PDB entry 7eyj: Crystal structure of Escherichia coli ppnP
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2021-05-31
Authors: Wen, Y., Wu, B.X.
PDB entry 7eyk: Crystal structure of Escherichia coli ppnP-Selenomethionine derived
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2021-05-31
Authors: Wen, Y., Wu, B.X.
PDB entry 7eyl: Crystal structure of Salmonella enterica ppnP
Classification: HYDROLASE
Source organism: Salmonella enterica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2021-05-31
Authors: Wen, Y., Wu, B.X.
PDB entry 7eym: Crystal structure of Vibrio cholerae ppnP
Classification: HYDROLASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2021-05-31
Authors: Wen, Y., Wu, B.X.
PDB entry 7eyo: Crystal structure of leech hyaluronidase
Classification: HYDROLASE
Source organism: Hirudo nipponia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-05-31
Authors: Huang, H., Hou, X.D., Rao, Y.J., Kang, Z.
PDB entry 7eyp: Crystal structure of Pseudomonas aeruginosa ppnP
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-05-31
Authors: Wen, Y., Wu, B.X.
PDB entry 7eyq: Cryo-EM (SPA) structure of human Nup155 Longer N-terminus (19-1069) at 5.4 Angstrom resolution
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; Recombinant vesicular stomatitis Indiana virus rVSV-G/GFP
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.4 Å
Deposited: 2021-05-31
Authors: Niranjan, S.
PDB entry 7eyr: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF apo
Classification: OXIDOREDUCTASE
Source organism: Aspergillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2021-06-01
Authors: Tao, H., Mori, T., Abe, I.
PDB entry 7eys: Complex structure of SptF with Fe, alpha-ketoglutarate, and andiconin D
Classification: OXIDOREDUCTASE
Source organism: Aspergillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-06-01
Authors: Tao, H., Mori, T., Abe, I.
PDB entry 7eyt: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF with andilesin C and NOG
Classification: OXIDOREDUCTASE
Source organism: Aspergillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-06-01
Authors: Tao, H., Mori, T., Abe, I.
PDB entry 7eyu: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF-N65T mutant with andiconin D
Classification: OXIDOREDUCTASE
Source organism: Aspergillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-06-01
Authors: Tao, H., Mori, T., Abe, I.
PDB entry 7eyw: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase SptF with terretonin C
Classification: OXIDOREDUCTASE
Source organism: Aspergillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-06-01
Authors: Tao, H., Mori, T., Abe, I.
PDB entry 7eyx: Crystal structure of Mg-free KRAS-G12D bound to GDP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2021-06-01
Authors: Fei, Z.
PDB entry 7ez0: Apo L-21 ScaI Tetrahymena ribozyme
Classification: RNA
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2021-06-01
Authors: Su, Z., Zhang, K., Kappel, K., Luo, B., Das, R., Chiu, W.
PDB entry 7ez2: Holo L-16 ScaI Tetrahymena ribozyme
Classification: RNA
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2021-06-01
Authors: Su, Z., Zhang, K., Kappel, K., Luo, B., Das, R., Chiu, W.
PDB entry 7ezb: Thorarchaeota Rab bound to GDP
Classification: SIGNALING PROTEIN
Source organism: Candidatus Thorarchaeota archaeon SMTZ1-45
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-06-01
Authors: Robinson, R.C., Tran, L.T.
PDB entry 7ezc: Adenosine A2a receptor mutant-I92N
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2021-06-01
Authors: Cui, M., Zhou, Q., Yao, D., Zhao, S., Song, G.
PDB entry 7ezd: Thorarchaeota Rab co-crystallized with GTP gamma-S
Classification: SIGNALING PROTEIN
Source organism: Candidatus Thorarchaeota archaeon SMTZ1-45
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2021-06-01
Authors: Robinson, R.C., Tran, L.T.
PDB entry 7eze: Thorarchaeota Rab GTP-gamma-S/Mg2+ (soak)
Classification: SIGNALING PROTEIN
Source organism: Candidatus Thorarchaeota archaeon SMTZ1-45
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-06-01
Authors: Robinson, R.C., Tran, L.T.
PDB entry 7ezf: Indole-2-carboxylic acid derivatives as allosteric inhibitors of fructose-1,6-bisphosphatase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2021-06-01
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 7ezg: The structure of the human METTL6 enzyme in complex with SAH
Classification: Methyltransferase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-06-01
Authors: Xie, W., Chen, R., Zhou, J., Liu, L.
PDB entry 7ezh: Cryo-EM structure of an activated Cholecystokinin A receptor (CCKAR)-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-06-01
Authors: Liu, Q.F., Yang, D.H., Zhuang, Y.W., Croll, T.I., Cai, X.Q., Duan, J., Dai, A.T., Yin, W.C., Ye, C.Y., Zhou, F.L., Wu, B.L., Zhao, Q., Xu, H.E., Wang, M.W., Jiang, Y.
PDB entry 7ezi: Rice L-galactose dehydrogenase (apo form)
Classification: OXIDOREDUCTASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2021-06-01
Authors: Momma, M., Fujimoto, Z.
PDB entry 7ezj: Crystal structure of p73 DNA binding domain complex bound with 1 bp and 2 bp spacer DNA response elements.
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-06-01
Authors: Koley, T., Roy Chowdhury, S., Kumar, M., Kaur, P., Singh, T.P., Viadiu, H., Ethayathulla, A.S.
PDB entry 7ezk: Cryo-EM structure of an activated Cholecystokinin A receptor (CCKAR)-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-06-01
Authors: Liu, Q.F., Yang, D.H., Zhuang, Y.W., Croll, T.I., Cai, X.Q., Duan, J., Dai, A.T., Yin, W.C., Ye, C.Y., Zhou, F.L., Wu, B.L., Zhao, Q., Xu, H.E., Wang, M.W., Jiang, Y.
PDB entry 7ezl: Rice L-galactose dehydrogenase (holo form)
Classification: OXIDOREDUCTASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-06-01
Authors: Momma, M., Fujimoto, Z.
PDB entry 7ezm: Cryo-EM structure of an activated Cholecystokinin A receptor (CCKAR)-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-06-01
Authors: Liu, Q.F., Yang, D.H., Zhuang, Y.W., Croll, T.I., Cai, X.Q., Duan, J., Dai, A.T., Yin, W.C., Ye, C.Y., Zhou, F.L., Wu, B.L., Zhao, Q., Xu, H.E., Wang, M.W., Jiang, Y.
PDB entry 7ezn: Crystal structure of CnYvh1 complex with vanadate
Classification: HYDROLASE
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-06-01
Authors: Choi, M.K., Yoo, Y.
PDB entry 7ezo: GH10 domain of bifunctional endoxylanase and arabinofuranosidase of Bi0569
Classification: HYDROLASE
Source organism: Bacillus sp. (in: Bacteria)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.80006 Å
Deposited: 2021-06-01
Authors: Wang, C.Y., Liu, D.
PDB entry 7ezp: Indole-2-carboxylic acid derivatives as allosteric inhibitors of fructose-1,6-bisphosphatase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-06-01
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 7ezq: Complex structure of AtHPPD with inhibitor Y15832
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.886 Å
Deposited: 2021-06-01
Authors: Lin, H.Y., Yang, G.F.
PDB entry 7ezr: Indole-2-carboxylic acid derivatives as allosteric inhibitors of fructose-1,6-bisphosphatase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.27 Å
Deposited: 2021-06-01
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 7ezt: The structure and functional mechanism of nucleotide regulated acetylhexosaminidase Am2136 from Akkermansia muciniphila
Classification: HYDROLASE
Source organism: Akkermansia muciniphila (strain ATCC BAA-835 / Muc)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2021-06-02
Authors: Bao, R., Li, C.C., Tang, X.Y., Zhu, Y.B., Song, Y.J., Zhao, N.L., Huang, Q., Mou, X.Y., Luo, G.H., Liu, T.G.
PDB entry 7ezv: local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-812 Fab and BD-836 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-06-02
Authors: Liu, P.L.
PDB entry 7ezw: Cyclic Peptide that Interacts with the eIF4E Capped-mRNA Binding Site
Classification: RNA BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-06-02
Authors: Brown, C.J., Ng, S., Frosi, Y.
PDB entry 7ezx: Structure of the phycobilisome from the red alga Porphyridium purpureum in Middle Light
Classification: PHOTOSYNTHESIS
Source organism: Porphyridium purpureum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-06-02
Authors: Ma, J.F., Sui, S.-F.
PDB entry 7ezy: anti-CRISPR-associated Aca2
Classification: IMMUNE SYSTEM
Source organism: Oceanimonas smirnovii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-06-02
Authors: Lee, S.Y., Park, H.H.
PDB entry 7ezz: Crystal structure of Salmonella typhi outer membrane phospholipase (OMPLA) dimer with bound calcium
Classification: HYDROLASE
Source organism: Salmonella typhi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2021-06-02
Authors: Perumal, P., Raina, R., Sreeshma, N.S., Arockiasamy, A., Sundarabaalaji, N.
PDB entry 7f00: Crystal structure of SPD_0310
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-06-03
Authors: Cao, K., Zhang, T., Li, N., Yang, X., Ding, J., He, Q., Sun, X.
PDB entry 7f01: Structure of a triple-helix region of human collagen type XVII
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2021-06-03
Authors: Zhu, Y., Yang, X., Sun, F.
PDB entry 7f02: Cytochrome c-type biogenesis protein CcmABCD from E. coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2021-06-03
Authors: Li, J., Zheng, W., Gu, M., Zhang, K., Zhu, J.P.
PDB entry 7f03: Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with ANP
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2021-06-03
Authors: Li, J., Zheng, W., Gu, M., Zhang, K., Zhu, J.P.
PDB entry 7f04: Cytochrome c-type biogenesis protein CcmABCD from E. coli in complex with Heme and ATP.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2021-06-03
Authors: Li, J., Zheng, W., Gu, M., Zhang, K., Zhu, J.P.
PDB entry 7f05: Crystal structure of human cardiac calsequestrin bound with calcium
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.298 Å
Deposited: 2021-06-03
Authors: Fan, X.X., Liu, X.X., Su, X.D., Wang, S.Q.
PDB entry 7f06: Crystal Structure of 1144
Classification: HYDROLASE
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-06-03
Authors: Huang, S.X., Yan, Y.J.
PDB entry 7f07: Autonomous VH domain that interacts with eIF4E at the Capped mRNA Binding site.
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-06-03
Authors: Brown, C.J., Frosi, Y., Ng, S., Lin, Y.C.
PDB entry 7f08: Crystal Structure of K8
Classification: HYDROLASE
Source organism: Abrus precatorius
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2021-06-03
Authors: Huang, S.X., Yan, Y.J.
PDB entry 7f09: Crystal structure of the HLH-Lz domain of human TFE3
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-06-03
Authors: Yang, G., Li, P., Liu, Z., Wu, S., Zhuang, C., Qiao, H., Fang, P., Wang, J.
PDB entry 7f0a: Crystal structure of capreomycin phosphotransferase
Classification: TRANSFERASE
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-06-03
Authors: Chang, C.Y., Pan, Y.C., Wang, Y.L., Toh, S.I.
PDB entry 7f0b: Crystal structure of capreomycin phosphotransferase in complex with ATP
Classification: TRANSFERASE
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2021-06-03
Authors: Chang, C.Y., Pan, Y.C., Wang, Y.L., Toh, S.I.
PDB entry 7f0c: Crystal structure of capreomycin phosphotransferase in complex with CMN IIA
Classification: TRANSFERASE
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2021-06-03
Authors: Chang, C.Y., Pan, Y.C., Wang, Y.L., Toh, S.I.
PDB entry 7f0d: Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin
Classification: RIBOSOME
Source organism: Mycobacterium tuberculosis H37Ra
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-06-03
Authors: Zhang, W., Sun, Y., Gao, N., Li, Z.
PDB entry 7f0e: Crystal Structure of EnPKS2
Classification: TRANSFERASE
Source organism: Erythroxylum novogranatense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2021-06-03
Authors: Huang, S.X., Yan, Y.J.
PDB entry 7f0f: Crystal structure of capreomycin phosphotransferase in complex with CMN IIB
Classification: TRANSFERASE
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-06-03
Authors: Chang, C.Y., Pan, Y.C., Wang, Y.L., Toh, S.I.
PDB entry 7f0g: Crystal Structure of EnPKS1
Classification: TRANSFERASE
Source organism: Erythroxylum novogranatense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2021-06-04
Authors: Huang, S.X., Yan, Y.J.
PDB entry 7f0h: Structural and functional characterization of bovine G1P[5] rotavirus VP8* protein
Classification: VIRAL PROTEIN
Source organism: Rotavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.695 Å
Deposited: 2021-06-04
Authors: Duan, Z., Sun, X.
PDB entry 7f0i: phosphodiesterase-9A in complex with inhibitor 4b
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.70001 Å
Deposited: 2021-06-04
Authors: Wu, Y., Huang, Y.Y., Luo, H.B.
PDB entry 7f0j: CryoEM structure of human Kv4.2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-06-04
Authors: Kise, Y., Nureki, O.
PDB entry 7f0k: Crystal structure of Kmp11
Classification: LIPID BINDING PROTEIN
Source organism: Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2021-06-05
Authors: Mo, X.
PDB entry 7f0l: STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES MONOMER
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2021-06-05
Authors: Tani, K., Nagashima, V.P., Kanno, R., Kawamura, S., Kikuchi, R., Ji, X.-C., Hall, M., Yu, L.-J., Kimura, Y., Madigan, M.T., Mizoguchi, A., Humbel, B.M., Wang-Otomo, Z.-Y.
PDB entry 7f0m: Crystal Structure of human Pin1 complexed with a potent covalent inhibitor
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-06-05
Authors: Liu, L., Li, J.
PDB entry 7f0n: Structure of deamidated Ubiquitin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-06-06
Authors: Chauhan, K., Varshney, N., Das, R.
PDB entry 7f0o: Crystal structure of selenomethionine-labeled isomerase NsrQ
Classification: ISOMERASE
Source organism: Aspergillus novofumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-06-06
Authors: Yang, J., Mori, T., Abe, I.
PDB entry 7f0r: Cryo-EM structure of Pseudomonas aeruginosa SutA transcription activation complex
Classification: TRANSCRIPTION/DNA
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.8 Å
Deposited: 2021-06-06
Authors: He, D.W., You, L.L., Zhang, Y.
PDB entry 7f0s: A crystal structure of alphavirus nonstructural protein 4 (nsP4) reveals an intrinsically 1dynamic RNA-dependent RNA polymerase
Classification: TRANSFERASE
Source organism: Ross river virus (strain T48)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-06-06
Authors: Tan, Y.B., Luo, D.
PDB entry 7f0t: Cryo-EM structure of dopamine receptor 1 and mini-Gs complex with dopamine bound
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-06-07
Authors: Xiao, T., Zheng, S.
PDB entry 7f0u: porcine epidemic diarrhea virus papain-like protease 2 C44S mutant in complex with mono ubiquitin
Classification: VIRAL PROTEIN/PROTEIN BINDING
Source organism: Bos taurus; Porcine epidemic diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-06-07
Authors: Chu, H.F., Lin, T.H.
PDB entry 7f0v: Structure of the M305I mutant of CueO
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.494 Å
Deposited: 2021-06-07
Authors: Kawano, T.K., Takata, S.T., Sakai, N.S., Imaizumi, R.I., Nakata, S.N., Takeshita, K.T., Yamashita, S.Y., Sakurai, T.S., Kataoka, K.K.
PDB entry 7f0w: Crystal structure of KRAS-G12D bound to GDP with switch 1 open conformation
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2021-06-07
Authors: Zhang, F.
PDB entry 7f0x: A SARS-CoV-2 neutralizing antibody
Classification: VIRAL PROTEIN/ANTIVIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-06-07
Authors: Zhang, G., Li, X., Guo, Y., Wang, Y., Yuan, S.
PDB entry 7f0y: Crystal structure of isomerase NsrQ F58A in complex with substrate analogue
Classification: ISOMERASE
Source organism: Aspergillus novofumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-06-07
Authors: Yang, J., Mori, T., Abe, I.
PDB entry 7f0z: Crystal structure of NsrQ W31A
Classification: ISOMERASE
Source organism: Aspergillus novofumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-07
Authors: Yang, J., Mori, T., Abe, I.
PDB entry 7f10: Crystal structure of NsrQ M128I in complex with substrate analogue 3
Classification: ISOMERASE
Source organism: Aspergillus novofumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-06-07
Authors: Yang, J., Mori, T., Abe, I.
PDB entry 7f11: Crystal structure of NsrQ M128I in complex with substrate analogue 7
Classification: ISOMERASE
Source organism: Aspergillus novofumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-06-07
Authors: Yang, J., Mori, T., Abe, I.
PDB entry 7f12: A SARS-CoV-2 neutralizing antibody
Classification: VIRAL PROTEIN/ANTIVIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2021-06-07
Authors: Zhang, G., Li, X., Guo, Y., Wang, Y., Yuan, S.
PDB entry 7f13: Crystal structure of isomerase Dcr3
Classification: ISOMERASE
Source organism: Diaporthe longicolla
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-06-07
Authors: Yang, J., Mori, T., Abe, I.
PDB entry 7f14: Crystal structure of isomerase Dcr3 complex with substrate analogue 3
Classification: ISOMERASE
Source organism: Diaporthe longicolla
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-06-07
Authors: Yang, J., Mori, T., Abe, I.
PDB entry 7f15: A SARS-CoV-2 neutralizing antibody
Classification: VIRAL PROTEIN/ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2021-06-07
Authors: Zhang, G., Li, X., Guo, Y., Wang, Y., Yuan, S.
PDB entry 7f16: Cryo-EM structure of parathyroid hormone receptor type 2 in complex with a tuberoinfundibular peptide of 39 residues and G protein
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Lama glama; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-06-08
Authors: Wang, X., Cheng, X., Zhao, L.H., Wang, Y., Ye, C., Zou, X., Dai, A., Cong, Z., Chen, J., Zhou, Q., Xia, T., Jiang, H., Xu, H.E., Yang, D., Wang, M.W.
PDB entry 7f17: Crystal Structure of acid phosphatase
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-06-08
Authors: Xu, X., Hou, X.D., Song, W., Rao, Y.J., Liu, L.M., Wu, J.
PDB entry 7f18: Crystal Structure of a mutant of acid phosphatase from Pseudomonas aeruginosa (Q57H/W58P/D135R)
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2021-06-08
Authors: Xu, X., Hou, X.D., Song, W., Yin, D.J., Rao, Y.J., Liu, L.M.
PDB entry 7f19: Structure of the G304E mutant of CueO
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.773 Å
Deposited: 2021-06-08
Authors: Takata, S.T., Kawano, T.K., Nakata, S.N., Takado, K.T., Imaizumi, R.I., Sakai, N.S., Takeshita, K.T., Yamashita, S.Y., Sakurai, T.S., Kataoka, K.K.
PDB entry 7f1a: Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound 78% GTP/22% GDP 1 K+, 1 Mg2+
Classification: STRUCTURAL PROTEIN
Source organism: Odinarchaeota archaeon (strain LCB_4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-06-08
Authors: Robinson, R.C., Akil, C., Tran, L.T.
PDB entry 7f1b: Odinarchaeota tubulin H393D mutant, in a pseudo protofilament arrangement, after GTP hydrolysis and phosphate release
Classification: STRUCTURAL PROTEIN
Source organism: Odinarchaeota archaeon (strain LCB_4)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-06-08
Authors: Robinson, R.C., Akil, C., Tran, L.T.
PDB entry 7f1d: Crystal Structure of BACE1 in complex with N-{3-[(4R,5R,6R)-2-amino-5-fluoro-4,6-dimethyl-5,6-dihydro-4H-1,3-thiazin-4-yl]-4-fluorophenyl}-2H,3H-[1,4]dioxino[2,3-c]pyridine-7-carboxamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-06-09
Authors: Ueno, T., Matsuoka, E., Asada, N., Yamamoto, S., Kanegawa, N., Ito, M., Ito, H., Moechars, D., Rombouts, F.J.R., Gijsen, H.J.M., Kusakabe, K.I.
PDB entry 7f1e: Structure of METTL6 bound with SAM
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.589 Å
Deposited: 2021-06-09
Authors: Li, S., Liao, S., Xu, C.
PDB entry 7f1g: BACE2 xaperone complex with N-{3-[(4R,5R,6R)-2-amino-5-fluoro-4,6-dimethyl-5,6-dihydro-4H-1,3-thiazin-4-yl]-4-fluorophenyl}-2H,3H-[1,4]dioxino[2,3-c]pyridine-7-carboxamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-06-09
Authors: Ueno, T., Matsuoka, E., Asada, N., Yamamoto, S., Kanegawa, N., Ito, M., Ito, H., Moechars, D., Rombouts, F.J.R., Gijsen, H.J.M., Kusakabe, K.I.
PDB entry 7f1h: Designed enzyme RA61 M48K/I72D mutant: form I
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2021-06-09
Authors: Fujioka, T., Oka, M., Numoto, N., Ito, N., Oda, M., Tanaka, F.
PDB entry 7f1i: Designed enzyme RA61 M48K/I72D mutant: form II
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-06-09
Authors: Fujioka, T., Oka, M., Numoto, N., Ito, N., Oda, M., Tanaka, F.
PDB entry 7f1j: Designed enzyme RA61 M48K/I72D mutant: form III
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-06-09
Authors: Fujioka, T., Oka, M., Numoto, N., Ito, N., Oda, M., Tanaka, F.
PDB entry 7f1k: Designed enzyme RA61 M48K/I72D mutant: form IV
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2021-06-09
Authors: Fujioka, T., Oka, M., Numoto, N., Ito, N., Oda, M., Tanaka, F.
PDB entry 7f1l: Designed enzyme RA61 M48K/I72D mutant: form V
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-06-09
Authors: Fujioka, T., Oka, M., Numoto, N., Ito, N., Oda, M., Tanaka, F.
PDB entry 7f1m: Marburg virus nucleoprotein-RNA complex
Classification: VIRAL PROTEIN
Source organism: Lake Victoria marburgvirus (strain Angola/2005); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-06-09
Authors: Fujita, F.Y., Sugita, Y., Takamatsu, Y., Houri, K., Muramoto, Y., Nakano, M., Tsunoda, Y., Igarashi, M., Becker, S., Noda, T.
PDB entry 7f1n: Beta-Glucosidase
Classification: HYDROLASE
Source organism: Thermofilum sp. ex4484_79
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2021-06-09
Authors: Anke, C.
PDB entry 7f1o: Cryo-EM structure of the GDP-bound dopamine receptor 1 and mini-Gs complex with Nb35
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2021-06-09
Authors: Xiao, T., Zheng, S.
PDB entry 7f1p: Crystal structure of Pseudomonas putida methionine gamma-lyase Q349S mutant ligand-free form.
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-06-09
Authors: Okawa, A., Handa, H., Yasuda, E., Murota, M., Kudo, D., Tamura, T., Shiba, T., Inagaki, K.
PDB entry 7f1q: Cryo-EM structure of the chemokine receptor CCR5 in complex with MIP-1a and Gi
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-06-09
Authors: Zhang, H., Chen, K., Tan, Q., Han, S., Zhu, Y., Zhao, Q., Wu, B.
PDB entry 7f1r: Cryo-EM structure of the chemokine receptor CCR5 in complex with RANTES and Gi
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-06-09
Authors: Zhang, H., Chen, K., Tan, Q., Han, S., Zhu, Y., Zhao, Q., Wu, B.
PDB entry 7f1s: Cryo-EM structure of the apo chemokine receptor CCR5 in complex with Gi
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-06-09
Authors: Zhang, H., Chen, K., Tan, Q., Han, S., Zhu, Y., Zhao, Q., Wu, B.
PDB entry 7f1t: Crystal structure of the human chemokine receptor CCR5 in complex with MIP-1a
Classification: SIGNALING PROTEIN
Source organism: Clostridium pasteurianum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-06-09
Authors: Zhang, H., Chen, K., Tan, Q., Han, S., Zhu, Y., Zhao, Q., Wu, B.
PDB entry 7f1u: Crystal structure of Pseudomonas putida methionine gamma-lyase Q349S mutant with L-methionine intermediates
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-06-09
Authors: Okawa, A., Handa, H., Yasuda, E., Murota, M., Kudo, D., Tamura, T., Shiba, T., Inagaki, K.
PDB entry 7f1v: Crystal structure of Pseudomonas putida methionine gamma-lyase Q349S mutant with L-homocysteine intermediates
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-06-09
Authors: Okawa, A., Handa, H., Yasuda, E., Murota, M., Kudo, D., Tamura, T., Shiba, T., Inagaki, K.
PDB entry 7f1w: X-ray crystal structure of visual arrestin complexed with inositol hexaphosphate
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.097 Å
Deposited: 2021-06-10
Authors: Kang, M., Jang, K., Eger, B.T., Ernst, O.P., Choe, H.W., Kim, Y.J.
PDB entry 7f1x: X-ray crystal structure of visual arrestin complexed with inositol 1,4,5-triphosphate
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-06-10
Authors: Jang, K., Kang, M., Eger, B.T., Choe, H.W., Ernst, O.P., Kim, Y.J.
PDB entry 7f1y: L-lactate oxidase without substrate
Classification: OXIDOREDUCTASE
Source organism: Aerococcus viridans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2021-06-10
Authors: Morimoto, Y., Inaka, K.
PDB entry 7f1z: Cryo-EM structure of the GDP-bound dopamine receptor 1 and mini-Gs complex without Nb35
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2021-06-10
Authors: Xiao, T., Zheng, S.
PDB entry 7f20: L-lactate oxidase with L-lactate
Classification: OXIDOREDUCTASE
Source organism: Aerococcus viridans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-06-10
Authors: Morimoto, Y., Inaka, K.
PDB entry 7f21: L-lactate oxidase with D-lactate
Classification: OXIDOREDUCTASE
Source organism: Aerococcus viridans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2021-06-10
Authors: Morimoto, Y., Inaka, K.
PDB entry 7f22: L-lactate oxidase with pyruvate
Classification: OXIDOREDUCTASE
Source organism: Aerococcus viridans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2021-06-10
Authors: Morimoto, Y., Inaka, K.
PDB entry 7f23: Cryo-EM structure of the GTP-bound dopamine receptor 1 and mini-Gs complex with Nb35
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2021-06-10
Authors: Xiao, T., Zheng, S.
PDB entry 7f24: Cryo-EM structure of the GTP-bound dopamine receptor 1 and mini-Gs complex without Nb35
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.16 Å
Deposited: 2021-06-10
Authors: Xiao, T., Zheng, S.
PDB entry 7f25: Crystal structure of SSB from Salmonella enterica serovar Typhimurium LT2.
Classification: DNA BINDING PROTEIN
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2021-06-10
Authors: Luo, R.H., Huang, Y.H., Huang, C.Y.