LiteFold/PDB huggingface dataset:
PDB entry 5ok2: Structure of the D10N mutant of beta-phosphoglucomutase from Lactococcus lactis inhibited with glucose 6-phosphate and tetrafluoroaluminate to 1.1A resolution.
Classification: ISOMERASE
Source organism: Lactococcus lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2017-07-25
Authors: Robertson, A.J., Bisson, C.
PDB entry 5ok3: Crystal Structure of the Protein-Kinase A catalytic subunit from Criteculus Griseus in complex with compounds RKp241 and Fasudil
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.588 Å
Deposited: 2017-07-25
Authors: Mueller, J.M., Heine, A., Klebe, G.
PDB entry 5ok4: Crystal structure of native [Fe]-hydrogenase Hmd from Methanothermobacter marburgensis inactivated by O2.
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis str. Marburg
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2017-07-25
Authors: Wagner, T., Huang, G., Bill, E., Ermler, U., Ataka, K., Shima, S.
PDB entry 5ok6: Ubiquitin specific protease 11 USP11 - peptide F complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2017-07-25
Authors: Spiliotopoulos, A., Dreveny, I.
PDB entry 5ok7: Conservatively refined structure of Gan1D-E170Q, a catalytic mutant of a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5ok8: Crystal structure of protein Lpp20 (HP1456) from Helicobacter pylori
Classification: UNKNOWN FUNCTION
Source organism: Helicobacter pylori (strain J99 / ATCC 700824)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.874 Å
Deposited: 2017-07-25
Authors: Zanotti, G., Mishra, N., Valesse, F.
PDB entry 5ok9: CH1 chimera of human 14-3-3 sigma with the HSPB6 phosphopeptide in a conformation with swapped phosphopeptides
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2017-07-25
Authors: Sluchanko, N.N., Tugaeva, K.V., Greive, S.J., Antson, A.A.
PDB entry 5oka: Non-conservatively refined structure of Gan1D-E170Q, a catalytic mutant of a 6-phospho-beta-galactosidase from Geobacillus stearothermophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5okb: High resolution structure of native Gan1D, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.331 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5okc: Crystal structure of the Ctf18-1-8 module from Ctf18-RFC
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-07-25
Authors: Grabarczyk, D.B., Kisker, C.
PDB entry 5okd: Crystal structure of bovine Cytochrome bc1 in complex with inhibitor SCR0911.
Classification: ELECTRON TRANSPORT
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-07-25
Authors: Amporndanai, K., O'Neill, P.M., Hasnain, S.S., Antonyuk, S.V.
PDB entry 5oke: Conservatively refined structure of Gan1D-E170Q, a catalytic mutant of a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with cellobiose-6-phosphate
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5okf: CH1 chimera of human 14-3-3 sigma with the HSPB6 phosphopeptide in a conformation with self-bound phosphopeptides
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2017-07-25
Authors: Sluchanko, N.N., Tugaeva, K.V., Greive, S.J., Antson, A.A.
PDB entry 5okg: Non-conservatively refined structure of Gan1D-E170Q, a catalytic mutant of a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with cellobiose-6-phosphate
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5okh: Conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in the C2 spacegroup
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5oki: Crystal structure of the Ctf18-1-8 module from Ctf18-RFC in complex with a 63 kDa fragment of DNA Polymerase epsilon
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.5 Å
Deposited: 2017-07-25
Authors: Grabarczyk, D.B., Kisker, C.
PDB entry 5okj: Non-conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in the C2 spacegroup
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5okk: Conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-galactose
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5okl: Human afamin monoclinic crystal form
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2017-07-25
Authors: Rupp, B., Naschberger, A., Bowler, M.W.
PDB entry 5okm: Crystal structure of human SHIP2 Phosphatase-C2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2017-07-25
Authors: Le Coq, J., Lietha, D.
PDB entry 5okn: Crystal structure of human SHIP2 Phosphatase-C2 D607A mutant
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2017-07-25
Authors: Le Coq, J., Lietha, D.
PDB entry 5oko: Crystal structure of human SHIP2 Phosphatase-C2 double mutant F593D/L597D
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2017-07-25
Authors: Le Coq, J., Lietha, D.
PDB entry 5okp: Crystal structure of human SHIP2 Phosphatase-C2 double mutant F593D/L597D
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2017-07-25
Authors: Le Coq, J., Lietha, D.
PDB entry 5okq: Non-conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-galactose
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5okr: Conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-glucose
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5oks: Non-conservatively refined structure of Gan1D, a 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-glucose
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2017-07-25
Authors: Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 5okt: Crystal structure of human Casein Kinase I delta in complex with IWP-2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2017-07-25
Authors: Pichlo, C., Brunstein, E., Baumann, U.
PDB entry 5oku: R. palustris Rpa4515 with adipate
Classification: TRANSPORT PROTEIN
Source organism: Rhodopseudomonas palustris CGA009
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2017-07-25
Authors: Rosa, L., Rafferty, J., Kelly, D., Dix, S.R.
PDB entry 5okz: Crystal Strucrure of the Mpp6 Exosome complex
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.20004 Å
Deposited: 2017-07-26
Authors: Falk, S., Ebert, J., Conti, E.
PDB entry 5ol0: Structure of Leishmania infantum Silent Information Regulator 2 related protein 1 (LiSIR2rp1) in complex with acetylated p53 peptide
Classification: HYDROLASE
Source organism: Leishmania infantum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2017-07-26
Authors: Ronin, C., Ciesielski, F., Ciapetti, P.
PDB entry 5ol1: Crystal structure of an inactivated Ssp SICLOPPS intein with a CAFHPQ extein
Classification: SPLICING
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.751 Å
Deposited: 2017-07-26
Authors: Kick, L.M., Schneider, S.
PDB entry 5ol2: The electron transferring flavoprotein/butyryl-CoA dehydrogenase complex from Clostridium difficile
Classification: FLAVOPROTEIN
Source organism: Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-07-26
Authors: Demmer, J.K., Chowdhury, N.P., Selmer, T., Ermler, U., Buckel, W.
PDB entry 5ol3: Crystal Structure of the Protein-Kinase A catalytic subunit from Criteculus Griseus in complex with compounds RKp013 and RKp117
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2017-07-26
Authors: Mueller, J.M., Heine, A., Klebe, G.
PDB entry 5ol4: 1.28 A resolution of Sporosarcina pasteurii urease inhibited in the presence of NBPT
Classification: HYDROLASE
Source organism: Sporosarcina pasteurii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2017-07-26
Authors: Mazzei, L., Cianci, M., Musiani, F., Ciurli, S.
PDB entry 5ol5: Crystal structure of an inactivated Ssp SICLOPPS intein with CFAHPQ extein
Classification: SPLICING
Source organism: Synechocystis sp.; Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.329 Å
Deposited: 2017-07-26
Authors: Kick, L.M., Schneider, S.
PDB entry 5ol6: Crystal structure of an inactivated Npu SICLOPPS intein with CAFHPQ extein
Classification: SPLICING
Source organism: Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-07-26
Authors: Kick, L.M., Schneider, S.
PDB entry 5ol7: Crystal structure of an inactivated Npu SICLOPPS intein with CFAHPQ extein
Classification: SPLICING
Source organism: Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-07-26
Authors: Kick, L.M., Schneider, S.
PDB entry 5ol8: Structure of human mitochondrial transcription elongation factor (TEFM) C-terminal domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-07-27
Authors: Hillen, H.S., Parshin, A.V., Agaronyan, K., Morozov, Y., Graber, J.J., Chernev, A., Schwinghammer, K., Urlaub, H., Anikin, M., Cramer, P., Temiakov, D.
PDB entry 5ol9: Structure of human mitochondrial transcription elongation factor (TEFM) N-terminal domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.302 Å
Deposited: 2017-07-27
Authors: Hillen, H.S., Parshin, A.V., Agaronyan, K., Morozov, Y., Graber, J.J., Chernev, A., Schwinghammer, K., Urlaub, H., Anikin, M., Cramer, P., Temiakov, D.
PDB entry 5ola: Structure of mitochondrial transcription elongation complex in complex with elongation factor TEFM
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.904 Å
Deposited: 2017-07-27
Authors: Hillen, H.S., Parshin, A.V., Agaronyan, K., Morozov, Y., Graber, J.J., Chernev, A., Schwinghammer, K., Urlaub, H., Anikin, M., Cramer, P., Temiakov, D.
PDB entry 5olb: crystal structure of autotaxin in complex with PF-8380
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2017-07-27
Authors: Hoerer, S., Lammens, A.
PDB entry 5olc: Crystal structure of the 3,6-anhydro-D-galactonate cycloisomerase from Zobellia galactanivorans
Classification: ISOMERASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2017-07-27
Authors: Michel, G., Czjzek, M., Jam, M.
PDB entry 5old: X-ray structure of the adduct formed upon reaction of ribonuclease A with a tetranuclear Pt-thiosemicarbazone compound
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2017-07-27
Authors: Ferraro, G., Merlino, A.
PDB entry 5ole: X-ray structure of the adduct formed upon reaction of hen egg white lysozyme with a tetranuclear Pt-thiosemicarbazone compound
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2017-07-27
Authors: Ferraro, G., Merlino, A.
PDB entry 5olf: Ligand-Based NMR Study of C-X-C Chemokine Receptor Type 4 (CXCR4)-Ligand Interactions in Living Cancer Cells
Classification: PEPTIDE BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2017-07-27
Authors: Brancaccio, D., Carotenuto, A.
PDB entry 5olg: Structure of the A2A-StaR2-bRIL562-ZM241385 complex at 1.86A obtained from in meso soaking experiments.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2017-07-27
Authors: Rucktooa, P., Cheng, R.K.Y., Segala, E., Geng, T., Errey, J.C., Brown, G.A., Cooke, R., Marshall, F.H., Dore, A.S.
PDB entry 5olh: Structure of the A2A-StaR2-bRIL562-Vipadenant complex at 2.6A obtained from in meso soaking experiments.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-07-27
Authors: Rucktooa, P., Cheng, R.K.Y., Segala, E., Geng, T., Errey, J.C., Brown, G.A., Cooke, R., Marshall, F.H., Dore, A.S.
PDB entry 5olj: Crystal structure of Porphyromonas gingivalis dipeptidyl peptidase 4
Classification: HYDROLASE
Source organism: Porphyromonas gingivalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-07-27
Authors: Fulop, V.
PDB entry 5olk: Crystal structure of the ATP-cone-containing NrdB from Leeuwenhoekiella blandensis
Classification: OXIDOREDUCTASE
Source organism: Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2017-07-28
Authors: Hasan, M., Grinberg, A.R., Sjoberg, B.M., Logan, D.T.
PDB entry 5oll: Crystal structure of gurmarin, a sweet taste suppressing polypeptide
Classification: PLANT PROTEIN
Source organism: Gymnema sylvestre
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2017-07-28
Authors: Sigoillot, M., Neiers, F., Legrand, P., Roblin, P., Briand, L.
PDB entry 5olm: TRIM21
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-07-28
Authors: James, L.C.
PDB entry 5oln: X-Ray Structure of the Complex Pyrimidine-nucleoside phosphorylase from Bacillus subtilis at 1.88 A
Classification: TRANSFERASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2017-07-28
Authors: Balaev, V.V., Prokofev, I.I., Gabdoulkhakov, A.G., Betzel, C., Lashkov, A.A.
PDB entry 5olo: Structure of the A2A-StaR2-bRIL562-Tozadenant complex at 3.1A obtained from in meso soaking experiments.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-07-28
Authors: Rucktooa, P., Cheng, R.K.Y., Segala, E., Geng, T., Errey, J.C., Brown, G.A., Cooke, R., Marshall, F.H., Dore, A.S.
PDB entry 5olp: Galacturonidase
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-07-28
Authors: Basle, A., Luis, A.S., Gilbert, H.J.
PDB entry 5olq: Rhamnogalacturonan lyase
Classification: LYASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2017-07-28
Authors: Basle, A., Luis, A.S., Gilbert, H.J.
PDB entry 5olr: Rhamnogalacturonan lyase
Classification: LYASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2017-07-28
Authors: Basle, A., Luis, A.S., Gilbert, H.J.
PDB entry 5ols: Rhamnogalacturonan lyase
Classification: LYASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-07-28
Authors: Basle, A., Luis, A.S., Gilbert, H.J.
PDB entry 5olt: Crystal structure of the extramembrane domain of the cellulose biosynthetic protein BcsG from Salmonella typhimurium
Classification: TRANSFERASE
Source organism: Salmonella typhimurium LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2017-07-28
Authors: Vella, P., Polyakova, A., Lindqvist, Y., Schnell, R., Bourenkov, G., Schneider, T., Schneider, G.
PDB entry 5olu: The crystal structure of a highly thermostable carboxyl esterase from Bacillus coagulans in complex with glycerol
Classification: HYDROLASE
Source organism: Bacillus coagulans DSM 1 = ATCC 7050
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-07-28
Authors: Gourlay, L.J., Nakhnoukh, C., Bolognesi, M.
PDB entry 5olv: Structure of the A2A-StaR2-bRIL562-LUAA47070 complex at 2.0A obtained from in meso soaking experiments.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.998 Å
Deposited: 2017-07-28
Authors: Rucktooa, P., Cheng, R.K.Y., Segala, E., Geng, T., Errey, J.C., Brown, G.A., Cooke, R., Marshall, F.H., Dore, A.S.
PDB entry 5olw: 5-fluorotryptophan labeled beta-phosphoglucomutase in an open conformation
Classification: ISOMERASE
Source organism: Lactococcus lactis subsp. lactis (strain IL1403)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2017-07-28
Authors: Bowler, M.W., von Velsen, J.
PDB entry 5olx: 5-fluorotryptophan labeled beta-phosphoglucomutase in a closed conformation, orthorhomic crystal form
Classification: ISOMERASE
Source organism: Lactococcus lactis subsp. lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2017-07-28
Authors: Bowler, M.W., von Velsen, J.
PDB entry 5oly: 5-fluorotryptophan labeled beta-phosphoglucomutase in a closed conformation, monoclinic crystal form
Classification: ISOMERASE
Source organism: Lactococcus lactis subsp. lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-07-28
Authors: Bowler, M.W., von Velsen, J.
PDB entry 5olz: Structure of the A2A-StaR2-bRIL562-Compound 4e complex at 1.9A obtained from bespoke co-crystallisation experiments.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-07-28
Authors: Rucktooa, P., Cheng, R.K.Y., Segala, E., Geng, T., Errey, J.C., Brown, G.A., Cooke, R., Marshall, F.H., Dore, A.S.
PDB entry 5om0: CH2 chimera of human 14-3-3 sigma with the Gli1 phosphopeptide around Ser640
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2017-07-28
Authors: Sluchanko, N.N., Tugaeva, K.V., Greive, S.J., Antson, A.A.
PDB entry 5om1: Structure of the A2A-StaR2-bRIL562-Compound 4e complex at 2.1A obtained from in meso soaking experiments (1 hour soak).
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-07-28
Authors: Rucktooa, P., Cheng, R.K.Y., Segala, E., Geng, T., Errey, J.C., Brown, G.A., Cooke, R., Marshall, F.H., Dore, A.S.
PDB entry 5om2: Crystal structure of Alpha1-antichymotrypsin variant DBS-I1: a drug-binding serpin for doxycycline
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2017-07-28
Authors: Schmidt, K., Muller, Y.A.
PDB entry 5om3: Crystal structure of Alpha1-antichymotrypsin variant DBS-I5: a MMP14-cleavable drug-binding serpin for doxycycline
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-07-28
Authors: Schmidt, K., Muller, Y.A.
PDB entry 5om4: Structure of the A2A-StaR2-bRIL562-Compound 4e complex at 1.86A obtained from in meso soaking experiments (24 hour soak).
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-07-28
Authors: Rucktooa, P., Cheng, R.K.Y., Segala, E., Geng, T., Errey, J.C., Brown, G.A., Cooke, R., Marshall, F.H., Dore, A.S.
PDB entry 5om5: Crystal structure of Alpha1-antichymotrypsin variant DBS-I-allo1: an allosterically triggered drug-binding serpin for doxycycline
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.595 Å
Deposited: 2017-07-28
Authors: Schmidt, K., Muller, Y.A.
PDB entry 5om6: Crystal structure of Alpha1-antichymotrypsin variant DBS-I-allo2: a MMP9-cleavable drug-binding serpin for doxycycline
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.849 Å
Deposited: 2017-07-28
Authors: Schmidt, K., Muller, Y.A.
PDB entry 5om7: Crystal structure of Alpha1-antichymotrypsin variant DBS-II: a drug-binding serpin for doxorubicin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.727 Å
Deposited: 2017-07-28
Authors: Schmidt, K., Kern, A., Muller, Y.A.
PDB entry 5om8: Crystal form 2 of Alpha1-antichymotrypsin variant DBS-II-allo: an allosterically modulated drug-binding serpin for doxorubicin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-07-28
Authors: Schmidt, K., Muller, Y.A.
PDB entry 5om9: Crystal structure of the human CARBOXYPEPTIDASE A1 in complex with a thiirane mechanism-based inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-07-28
Authors: Gallego, P., Granados, C., Fernandez, D., Pallares, I., Covaleda, G., Aviles, F.X., Vendrell, J., Reverter, D.
PDB entry 5oma: CH3 chimera of human 14-3-3 sigma with the StARD1 peptide including Ser57
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2017-07-28
Authors: Sluchanko, N.N., Tugaeva, K.V., Greive, S.J., Antson, A.A.
PDB entry 5omb: Crystal structure of K. lactis Ddc2 N-terminus in complex with S. cerevisiae Rfa1 N-OB domain
Classification: PROTEIN BINDING
Source organism: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37); Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2017-07-28
Authors: Deshpande, I., Seeber, A., Shimada, K., Keusch, J.J., Gut, H., Gasser, S.M.
PDB entry 5omc: Crystal structure of K. lactis Ddc2 N-terminus in complex with S. cerevisiae Rfa1 (K45E mutant) N-OB domain
Classification: PROTEIN BINDING
Source organism: Kluyveromyces lactis; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2017-07-28
Authors: Deshpande, I., Seeber, A., Shimada, K., Keusch, J.J., Gut, H., Gasser, S.M.
PDB entry 5omd: Crystal structure of S. cerevisiae Ddc2 N-terminal coiled-coil domain
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-07-28
Authors: Deshpande, I., Seeber, A., Shimada, K., Keusch, J.J., Gut, H., Gasser, S.M.
PDB entry 5ome: The cryofrozen atomic resolution X-ray crystal structure of the reduced form (Fe2+) perdeuterated Pyrococcus furiosus Rubredoxin in D2O (100K, 0.75 Angstrom resolution)
Classification: ELECTRON TRANSPORT
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 0.747 Å
Deposited: 2017-07-31
Authors: Cuypers, M.G., Mason, S.A., Mossou, E., Haertlein, M., Mitchell, E.P., Forsyth, V.T.
PDB entry 5omf: Closed, ternary structure of KOD DNA polymerase
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.092 Å
Deposited: 2017-07-31
Authors: Kropp, H.M., Betz, K., Wirth, J., Diederichs, K., Marx, A.
PDB entry 5omg: p38alpha in complex with pyrazolobenzothiazine inhibitor COXP4M12
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-07-31
Authors: Buehrmann, M., Rauh, D.
PDB entry 5omh: p38alpha in complex with pyrazolobenzothiazine inhibitor COXH11
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-07-31
Authors: Buehrmann, M., Rauh, D.
PDB entry 5omi: Crystal structure of GP2 from Lassa virus in a post fusion conformation
Classification: VIRAL PROTEIN
Source organism: Lassa mammarenavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2017-07-31
Authors: Shulman, A., Diskin, R.
PDB entry 5omj: R2-like ligand-binding oxidase with aerobically reconstituted metal cofactor after photoconversion
Classification: OXIDOREDUCTASE
Source organism: Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.005 Å
Deposited: 2017-07-31
Authors: Griese, J.J., Hogbom, M.
PDB entry 5omk: R2-like ligand-binding oxidase with aerobically reconstituted metal cofactor before photoconversion
Classification: OXIDOREDUCTASE
Source organism: Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.704 Å
Deposited: 2017-07-31
Authors: Griese, J.J., Hogbom, M.
PDB entry 5oml: Crystal structure of Trypanosoma Brucei PEX14 N-terminal domain in complex with small molecules to investigate the water envelope
Classification: SIGNALING PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-08-01
Authors: Ratkova, E.L., Dawidowski, M., Napolitano, V., Dubin, G., Fino, R., Popowicz, G., Sattler, M., Tetko, I.V.
PDB entry 5omm: GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-14
Classification: VIRAL PROTEIN
Source organism: Norovirus GII.10; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-08-01
Authors: Koromyslova, A.D., Hansman, G.S.
PDB entry 5omn: GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-27
Classification: VIRAL PROTEIN
Source organism: Norwalk virus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.682 Å
Deposited: 2017-08-01
Authors: Koromyslova, A.D., Hansman, G.S.
PDB entry 5omo: CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE-1 (RPMFE1) COMPLEXED WITH WITH 3S-HYDROXY-DECANOYL-COA AND 3-KETO-DECANOYL-COA
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2017-08-01
Authors: Kasaragod, P., Kiema, T.-R., Schmitz, W., Hiltunen, J.K., Wierenga, R.K.
PDB entry 5omp: Human FKBP5 protein
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2017-08-01
Authors: Kumar, R., Moche, M., Winblad, B., Pavlov, P.
PDB entry 5omq: Ternary complex of 9N DNA polymerase in the replicative state with three metal ions in the active site
Classification: TRANSFERASE
Source organism: Thermococcus sp. (strain 9oN-7); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2017-08-01
Authors: Betz, K., Marx, A., Diederichs, K.
PDB entry 5omr: Crystal structure of Amycolatopsis cytochrome P450 GcoA in complex with vanillin.
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis sp. ATCC 39116
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2017-08-01
Authors: Mallinson, S.J.B., Johnson, C.W., Neidle, E.L., Beckham, G.T., McGeehan, J.E.
PDB entry 5oms: Crystal structure of Amycolatopsis cytochrome P450 GcoA in complex with guaethol.
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis sp. ATCC 39116
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-08-01
Authors: Mallinson, S.J.B., Johnson, C.W., Neidle, E.L., Beckham, G.T., McGeehan, J.E.
PDB entry 5omt: Endonuclease NucB
Classification: HYDROLASE
Source organism: Bacillus licheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2017-08-01
Authors: Basle, A., Lewis, R.J.
PDB entry 5omu: Crystal structure of Amycolatopsis cytochrome P450 GcoA in complex with syringol
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis sp. ATCC 39116
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-08-01
Authors: Mallinson, S.J.B., Johnson, C.W., Neidle, E.L., Beckham, G.T., McGeehan, J.E.
PDB entry 5omv: Ternary complex of 9N DNA polymerase in the replicative state with two metal ions in the active site
Classification: TRANSFERASE
Source organism: Thermococcus sp. 9oN-7; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.003 Å
Deposited: 2017-08-01
Authors: Betz, K., Marx, A., Diederichs, K.
PDB entry 5omw: Mutant T252A of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformation
Classification: TRANSLATION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-08-02
Authors: Palencia, A., Cusack, S.
PDB entry 5omx: X-ray Structure of the H2A-N38C Nucleosome Core Particle
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2017-08-02
Authors: Frouws, T.D., Richmond, T.J.
PDB entry 5omy: HIGH-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR 4P
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-08-02
Authors: Hochscherf, J., Lindenblatt, D., Witulski, B., Birus, R., Aichele, D., Marminon, C., Bouaziz, Z., Le Borgne, M., Jose, J., Niefind, K.
PDB entry 5omz: Solution structure of domain III (DIII)of Zika virus Envelope protein
Classification: VIRAL PROTEIN
Source organism: Zika virus (strain Mr 766)
Experimental method: SOLUTION NMR
Deposited: 2017-08-02
Authors: Zerbe, O., Bardelli, M.
PDB entry 5on0: Crystal structure of NikA in complex with Fe-L2 (N-(2-hydroxy-3methoxybenzyl)-N-N'-ethylenediaminediacetic acid)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-08-02
Authors: Cavazza, C., Menage, S.
PDB entry 5on1: Crystal structure of NikA in complex with hydroxylated Fe-L1 (N-(2-hydroxybenzyl)-N'-(2-thiomethylbenzyl)-N,N'-ethylenediamine diacetic acid)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-08-02
Authors: Cavazza, C., Menage, S.
PDB entry 5on2: Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation
Classification: TRANSLATION
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-08-02
Authors: Palencia, A., Cusack, S.
PDB entry 5on3: Quaternary complex of mutant T252A of E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of leucine in the aminoacylation conformation
Classification: LIGASE
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-08-02
Authors: Palencia, A., Cusack, S.
PDB entry 5on4: Crystal structure of NikA in complex with Fe-L1 (N-(2-hydroxybenzyl)-N'-(2-thiomethylbenzyl)-N,N'-ethylenediamine diacetic acid)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-08-02
Authors: Cavazza, C., Menage, S.
PDB entry 5on5: Crystal structure of NikA in complex with Fe-L2 (Fe-L2 (N-(2-hydroxy-3-methoxybenzyl)-N'-(2-thiomethylbenzyl)- N,N'-ethylenediamine diacetic acid) after dioxygen oxidation
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-08-02
Authors: Cavazza, C., Menage, S.
PDB entry 5on6: Crystal structure of haemanthamine bound to the 80S ribosome
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-08-03
Authors: Pellegrino, S., Meyer, M., Yusupova, G., Yusupov, M.
PDB entry 5on7: The ENTH domain from epsin-2 in complex with phosphatidylinositol 4,5-bisphosphate (PIP2)
Classification: ENDOCYTOSIS
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2017-08-03
Authors: Garcia-Alai, M., GIeras, A., Meijers, R.
PDB entry 5on8: Crystal structure of NikA in complex with reduced Fe-L2 (N-(2-hydroxy-3-methoxybenzyl)-N'-(2-thiomethylbenzyl)- N,N'-ethylenediamine diacetic acid)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-08-03
Authors: Cavazza, C., Menage, S.
PDB entry 5on9: Crystal structure of NikA in complex with reduced Fe-L1 (N-(2-hydroxybenzyl)-N'-(2-thiomethylbenzyl)-N,N'-ethylenediamine diacetic acid)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-08-03
Authors: Cavazza, C., Menage, S.
PDB entry 5ona: Drosophila Bag-of-marbles CBM peptide bound to human CAF40-CNOT1
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-08-03
Authors: Raisch, T., Sgromo, A., Backhaus, C., Izaurralde, E., Weichenrieder, O.
PDB entry 5onb: Drosophila Bag-of-marbles CBM peptide bound to human CAF40
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2017-08-03
Authors: Raisch, T., Sgromo, A., Backhaus, C., Izaurralde, E., Weichenrieder, O.
PDB entry 5onc: Catabolism of the Cholesterol Side Chain in Mycobacterium tuberculosis is Controlled by a Redox-Sensitive Thiol Switch
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2017-08-03
Authors: Schaefer, C., Kuper, J., Sampson, N.S., Kisker, C.
PDB entry 5ond: RfaH from Escherichia coli in complex with ops DNA
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-08-03
Authors: Zuber, P.K., Artsimovitch, I., Roesch, P., Knauer, S.H.
PDB entry 5one: Crystal structure of Aurora-A in complex with FMF-03-145-1 (compound 2)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-08-03
Authors: Chaikuad, A., Ferguson, F.M., Gray, N.S., Knapp, S.
PDB entry 5onf: The ENTH domain from epsin-1
Classification: ENDOCYTOSIS
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-08-03
Authors: Garcia-Alai, M., GIeras, A., Meijers, R.
PDB entry 5ong: X-Ray crystal structure of a nucleosome core particle with its DNA site-specifically crosslinked to the histone octamer
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.797 Å
Deposited: 2017-08-03
Authors: Frouws, T.D., Barth, P.D., Richmond, T.J.
PDB entry 5onh: Quaternary complex of wild type E. coli leucyl-tRNA synthetase with tRNA(leu), leucyl-adenylate analogue, and post-transfer editing analogue of norvaline in the aminoacylation conformation
Classification: LIGASE
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-08-03
Authors: Palencia, A., Cusack, S.
PDB entry 5oni: LOW-SALT STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR 4P
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-08-03
Authors: Hochscherf, J., Lindenblatt, D., Witulski, B., Birus, R., Aichele, D., Marminon, C., Bouaziz, Z., Le Borgne, M., Jose, J., Niefind, K.
PDB entry 5onj: YnDL in Complex with 5 amino acid (PGA) complex
Classification: HYDROLASE
Source organism: Bacillus subtilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-08-03
Authors: Ramaswamy, S., Rasheed, M., Morelli, C., Calvio, C., Sutton, B., Pastore, A.
PDB entry 5onk: Native YndL
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2017-08-03
Authors: Ramaswamy, S., Rasheed, M., Morelli, C., Calvio, C., Sutton, B., Pastore, A.
PDB entry 5onl: YNDL-apo (Zinc-free)
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-08-03
Authors: Ramaswamy, S., Rasheed, M., Morelli, C., Calvio, C., Sutton, B., Pastore, A.
PDB entry 5onm: Crystal Structure of Ectoine Synthase from P. lautus
Classification: METAL BINDING PROTEIN
Source organism: Paenibacillus lautus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2017-08-04
Authors: Bremer, E.
PDB entry 5onn: Crystal Structure of Ectoine Synthase from P. lautus
Classification: METAL BINDING PROTEIN
Source organism: Paenibacillus lautus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2017-08-04
Authors: Bremer, E.
PDB entry 5ono: Crystal Structure of Ectoine Synthase from P. lautus
Classification: METAL BINDING PROTEIN
Source organism: Paenibacillus lautus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-08-04
Authors: Bremer, E.
PDB entry 5onp: Alzheimer's Amyloid-Beta Peptide Fragment 1-40 in Complex with Cd-substituted Thermolysin
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2017-08-04
Authors: Leite, J.P., Gales, L.
PDB entry 5onq: Alzheimer's Amyloid-Beta Peptide Fragment 29-40 in Complex with Cd-substituted Thermolysin
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2017-08-04
Authors: Leite, J.P., Gales, L.
PDB entry 5onr: Alzheimer's Amyloid-Beta Peptide Fragment 1-40 in Complex with Thermolysin
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2017-08-04
Authors: Leite, J.P., Gales, L.
PDB entry 5ons: Crystal structure of the minimal DENR-MCTS1 complex
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2017-08-04
Authors: Ahmed, Y.L., Sinning, I.
PDB entry 5ont: Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase(MhGgH) E419A variant in complex with glucosylglycerol
Classification: HYDROLASE
Source organism: Mycobacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2017-08-04
Authors: Cereija, T.B., Macedo-Ribeiro, S., Pereira, P.J.B.
PDB entry 5onu: Trimeric OmpU structure
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2017-08-04
Authors: Li, H.Y., Dong, C.J.
PDB entry 5onv: Cryo-EM structure of F-actin in complex with ADP
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2017-08-04
Authors: Merino, F., Pospich, S., Funk, J., Kuellmer, F., Arndt, H.-D., Bieling, P., Raunser, S.
PDB entry 5onw: X-Ray crystal structure of a nucleosome core particle with its DNA site-specifically crosslinked to the histone octamer and the two H2A/H2B dimers crosslinked via H2A N38C
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-08-04
Authors: Frouws, T.D., Barth, P.D., Richmond, T.J.
PDB entry 5onx: Resting state copper nitrite reductase determined by serial femtosecond rotation crystallography
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes xylosoxydans xylosoxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-08-04
Authors: Halsted, T.P., Yamashita, K., Hirata, K., Ago, H., Ueno, G., Tosha, T., Eady, R.R., Antonyuk, S.V., Yamamoto, M., Hasnain, S.S.
PDB entry 5ony: As-isolated resting state copper nitrite reductase from Achromobacter xylosoxidans
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes xylosoxydans xylosoxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-08-04
Authors: Halsted, T.P., Yamashita, K., Hirata, K., Ago, H., Ueno, G., Tosha, T., Eady, R.R., Antonyuk, S.V., Yamamoto, M., Hasnain, S.S.
PDB entry 5onz: Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase (MhGgH) D182A variant in complex with glucosylglycolate
Classification: HYDROLASE
Source organism: Mycobacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2017-08-04
Authors: Cereija, T.B., Macedo-Ribeiro, S., Pereira, P.J.B.
PDB entry 5oo0: Cdk2(WT) covalent adduct with D28 at C177
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-08-04
Authors: Craven, G., Morgan, R.M.L., Mann, D.J.
PDB entry 5oo1: Cdk2(F80C, C177A) covalent adduct with C37 at F80C
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-08-04
Authors: Craven, G., Morgan, R.M.L., Mann, D.J.
PDB entry 5oo2: Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase (MhGgH) E419A variant in complex with glucosylglycolate
Classification: HYDROLASE
Source organism: Mycobacterium hassiacum (strain DSM 44199 / CIP 105218 / JCM 12690 / 3849)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2017-08-05
Authors: Cereija, T.B., Macedo-Ribeiro, S., Pereira, P.J.B.
PDB entry 5oo3: Cdk2(F80C, C177A) with covalent ligand at F80C
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2017-08-05
Authors: Craven, G., Morgan, R.M.L., Mann, D.J.
PDB entry 5oo4: Streptomyces PAC13 with uridine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coeruleorubidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-08-05
Authors: Chung, C., Michailidou, F.
PDB entry 5oo5: Streptomyces PAC13 with uridine uronic acid
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coeruleorubidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2017-08-05
Authors: Chung, C., Michailidou, F.
PDB entry 5oo6: Complex of human nuclear cap-binding complex with ARS2 C-terminal peptide
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-08-06
Authors: Cusack, S., Schulze, W.M.
PDB entry 5oo7: The ENTH domain from epsin-2 in complex with phosphatidylinositol 4,5-bisphosphate (PIP2)
Classification: ENDOCYTOSIS
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2017-08-06
Authors: Garcia-Alai, M., Meijers, R.
PDB entry 5oo8: Streptomyces PAC13 (H42Q) with uridine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coeruleorubidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2017-08-06
Authors: Chung, C., Michailidou, F.
PDB entry 5oo9: Streptomyces PAC13 (Y55F) with uridine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coeruleorubidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2017-08-06
Authors: Chung, C., Michailidou, F.
PDB entry 5ooa: Streptomyces PAC13 (Y89F) with uridine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coeruleorubidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-08-06
Authors: Chung, C., Michailidou, F.
PDB entry 5oob: COMPLEX OF HUMAN NUCLEAR CAP-BINDING COMPLEX WITH M7GTP AND NELF-E C-TERMINAL PEPTIDE
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2017-08-07
Authors: Cusack, S., Schulze, W.M.
PDB entry 5ooc: Cryo-EM structure of jasplakinolide-stabilized F-actin in complex with ADP
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2017-08-07
Authors: Merino, F., Pospich, S., Funk, J., Kuellmer, F., Arndt, H.-D., Bieling, P., Raunser, S.
PDB entry 5ood: Cryo-EM structure of jasplakinolide-stabilized F-actin in complex with ADP-Pi
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2017-08-07
Authors: Merino, F., Pospich, S., Funk, J., Kuellmer, F., Arndt, H.-D., Bieling, P., Raunser, S.