LiteFold/PDB huggingface dataset:
PDB entry 8wkl: Rauvolfia serpentina strictosidine synthase (RsSTR) in complex with a non-reactive tryptamine substitute crystallized in P1211 space group
Classification: LYASE
Source organism: Rauvolfia serpentina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2023-09-28
Authors: Nitin, K., Rajakumara, E.
PDB entry 8wkn: Cryo-EM structure of DSR2-DSAD1
Classification: ANTIVIRAL PROTEIN
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-09-28
Authors: Zhang, H., Li, Z., Li, X.Z.
PDB entry 8wko: Crystal structure of O-acetylhomoserine sulfhydrylase from Lactobacillus plantarum in the closed form
Classification: LYASE
Source organism: Lactiplantibacillus plantarum JDM1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2023-09-28
Authors: Oda, K., Matoba, Y.
PDB entry 8wkp: Structural basis of translation inhibition by a valine tRNA-derived fragment
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.62 Å
Deposited: 2023-09-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8wkq: Cryo-EM structure of the MS ring (C1) with export apparatus and proximal rod within the flagellar motor-hook complex in the CW state.
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-09-28
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wkr: Crystal structure of O-acetylhomoserine sulfhydrylase from Lactobacillus plantarum in the open form
Classification: LYASE
Source organism: Lactiplantibacillus plantarum JDM1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-09-28
Authors: Oda, K., Matoba, Y.
PDB entry 8wks: Cryo-EM structure of DSR2-TUBE complex
Classification: STRUCTURAL PROTEIN
Source organism: Bacillus subtilis subsp. natto (strain BEST195); Siphoviridae sp. ct0106
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2023-09-28
Authors: Gao, A., Huang, J., Zhu, K.
PDB entry 8wkt: Cryo-EM structure of DSR2-DSAD1 complex
Classification: STRUCTURAL PROTEIN
Source organism: Bacillus subtilis subsp. natto (strain BEST195); Caudoviricetes
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2023-09-28
Authors: Gao, A., Huang, J., Zhu, K.
PDB entry 8wku: Complex structure of MjHKU4r-CoV-1 spike RBD bound to human CD26
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Manis javanica
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-09-28
Authors: Zhao, Z.N., Chai, Y., Gao, F.
PDB entry 8wkw: Structure of MAVS-CARD Filament
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2023-09-28
Authors: Shi, M., Gao, P.
PDB entry 8wkx: Cryo-EM structure of DSR2
Classification: SURFACTANT PROTEIN
Source organism: Bacillus subtilis subsp. natto (strain BEST195)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.15 Å
Deposited: 2023-09-28
Authors: Gao, A., Huang, J., Zhu, K.
PDB entry 8wky: Crystal structure of the Melanocortin-4 Receptor (MC4R) in complex with S25
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-09-28
Authors: Gimenez, L.E., Martin, C., Yu, J., Hollanders, C., Hernandez, C., Dahir, N.S., Wu, Y., Yao, D., Han, G.W., Wu, L., Poorten, O.V., Lamouroux, A., Mannes, M., Tourwe, D., Zhao, S., Stevens, R.C., Cone, R.D., Ballet, S.
PDB entry 8wkz: Crystal structure of the Melanocortin-4 Receptor (MC4R) in complex with S31
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-09-28
Authors: Gimenez, L.E., Martin, C., Yu, J., Hollanders, C., Hernandez, C., Dahir, N.S., Wu, Y., Yao, D., Han, G.W., Wu, L., Poorten, O.V., Lamouroux, A., Mannes, M., Tourwe, D., Zhao, S., Stevens, R.C., Cone, R.D., Ballet, S.
PDB entry 8wl0: Crystal structure of AtHPPD+Y19542 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.789 Å
Deposited: 2023-09-29
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8wl1: The crystal structure of D-mandelate dehydrogenase from Lactobacillus brevis
Classification: OXIDOREDUCTASE
Source organism: Levilactobacillus brevis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-09-29
Authors: Liu, F., Rao, Z.M.
PDB entry 8wl2: Cryo-EM structure of the membrane-anchored part of the flagellar motor-hook complex in the CW state.
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-09-29
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wl3: The structure of D-mandelate dehydrogenase with L243W mutation
Classification: OXIDOREDUCTASE
Source organism: Levilactobacillus brevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-09-29
Authors: Liu, F., Rao, Z.M.
PDB entry 8wl4: The structure of D-mandelate dehydrogenase with L103G and T143G mutations
Classification: OXIDOREDUCTASE
Source organism: Levilactobacillus brevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-09-29
Authors: Liu, F., Rao, Z.M.
PDB entry 8wl5: X-ray structure of Enterobacter cloacae allose-binding protein in free form
Classification: SUGAR BINDING PROTEIN
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-09-29
Authors: Kamitori, S.
PDB entry 8wl6: Structure of 1,3-beta-glucan synthase component FKS1
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2023-09-29
Authors: Li, J.L., Zhu, A.Q., Liu, J.X., Dai, X.L., Wang, X., Yan, C.Y., Deng, D.
PDB entry 8wl7: X-ray structure of Enterobacter cloacae allose-binding protein in complex with D-allose
Classification: SUGAR BINDING PROTEIN
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2023-09-29
Authors: Kamitori, S.
PDB entry 8wl9: X-ray structure of Enterobacter cloacae allose-binding protein in complex with D-ribose
Classification: SUGAR BINDING PROTEIN
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-09-29
Authors: Kamitori, S.
PDB entry 8wla: Cryo-EM structure of the beta-1,3-glucan synthase FKS1-Rho1 complex
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-09-29
Authors: Li, J.L., Zhu, A.Q., Liu, J.X., Dai, X.L., Yan, C.Y., Deng, D., Wang, X.
PDB entry 8wlb: X-ray structure of Enterobacter cloacae allose-binding protein in complex with D-psicose
Classification: SUGAR BINDING PROTEIN
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2023-09-29
Authors: Kamitori, S.
PDB entry 8wld: Cryo-EM structure of SIR2/HerA antiphage complex
Classification: IMMUNE SYSTEM
Source organism: Paenibacillus sp. 453mf
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2023-09-29
Authors: Yu, G., Liao, F., Li, X., Li, Z., Zhang, H.
PDB entry 8wle: Cryo-EM structure of the LP ring within the flagellar motor-hook complex in the CCW state.
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-09-29
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wlg: Crystal structure of Cypovirus Polyhedra mutant fused with c-Myc fragment
Classification: VIRAL PROTEIN
Source organism: Bombyx mori cytoplasmic polyhedrosis virus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-09-29
Authors: Kojima, M., Ueno, T., Abe, S., Hirata, K.
PDB entry 8wlh: Cryo-EM structure of the proximal rod-export apparatus and FlgF within the motor-hook complex in the CCW state
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-09-29
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wli: Cryo-EM structure of the MS ring (C34) within the flagellar motor-hook complex in the CCW state
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-09-30
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wlj: Cryo-EM structure of human apo VMAT2 with nanobody in an outward-facing conformation
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-09-30
Authors: Qu, Q., Wang, Y., Zhou, Z.
PDB entry 8wlk: Cryo-EM structure of human VMAT2 in presence of Tetrabenazine, determined in an outward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2023-09-30
Authors: Qu, Q., Wang, Y., Zhou, Z.
PDB entry 8wll: Cryo-EM structure of human VMAT2 Y422C, in the presence of reserpine, determined in an inward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2023-09-30
Authors: Qu, Q., Wang, Y., Zhou, Z.
PDB entry 8wlm: Cryo-EM structure of human VMAT2 in presence of 5-HT, determined in an outward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2023-09-30
Authors: Qu, Q., Wang, Y., Zhou, Z.
PDB entry 8wln: Cryo-EM structure of the MS ring with export apparatus and proximal rod within the motor-hook complex in the CCW state
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-09-30
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wlo: Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with hippopotamus ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Hippopotamus amphibius; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2023-09-30
Authors: Han, P., Yang, R.R., Li, S.H.
PDB entry 8wlp: Cryo-EM structure of the distal rod-hook within the flagellar motor-hook complex in the CCW state.
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-09-30
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wlq: Cryo-EM structure of the whole rod-export apparatus with hook within the flagellar motor-hook complex in the CCW state.
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-09-30
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wlr: Cryo-EM structure of SARS-CoV-2 prototype spike protein receptor-binding domain in complex with hippopotamus ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Hippopotamus amphibius; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-09-30
Authors: Han, P., Yang, R.R., Li, S.H.
PDB entry 8wls: Bcl-xL in complex with HBx BH3 delta C peptide
Classification: APOPTOSIS
Source organism: Hepatitis B virus; Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-10-01
Authors: Kobayashi, N., Nagata, T., Kusunoki, H.
PDB entry 8wlt: Cryo-EM structure of the membrane-anchored part of the flagellar motor-hook complex in the CCW state
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-10-01
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wlu: Cryo-EM structure of bat RsSHC014 spike glycoprotein
Classification: VIRAL PROTEIN
Source organism: Bat SARS-like coronavirus RsSHC014; Enterobacteria phage T6
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-10-01
Authors: Wang, X., Qiao, S.
PDB entry 8wlv: Crystal structure of P122A_Msd in complex with 5-azauracil
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-10-01
Authors: Porathoor, S., Anand, R.
PDB entry 8wlw: Crystal structure of DelP123_Msd in complex with 5-azauracil
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.538 Å
Deposited: 2023-10-01
Authors: Porathoor, S., Anand, R.
PDB entry 8wlx: Crystal structure of P123A_Msd
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.562 Å
Deposited: 2023-10-01
Authors: Porathoor, S., Anand, R.
PDB entry 8wly: Cryo-EM structure of bat WIV1 spike glycoprotein
Classification: VIRAL PROTEIN
Source organism: Bat SARS-like coronavirus WIV1; Enterobacteria phage T6
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2023-10-01
Authors: Wang, X., Qiao, S.
PDB entry 8wlz: Cryo-EM structure of the WIV1 S-hACE2 complex
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Bat SARS-like coronavirus WIV1; Enterobacteria phage T6; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.45 Å
Deposited: 2023-10-01
Authors: Wang, X., Qiao, S.
PDB entry 8wm0: Crystal structure of TNIK-thiopeptide wTP3 complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-10-01
Authors: Hamada, K., Kobayashi, S., Vinogradov, A.A., Zhang, Y., Goto, Y., Suga, H., Ogata, K., Sengoku, T.
PDB entry 8wm1: DHS dehydratase
Classification: HYDROLASE
Source organism: Acinetobacter pittii PHEA-2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2023-10-02
Authors: Wang, M.
PDB entry 8wm2: Crystal structure of AbmM
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. ATCC 700974
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-10-02
Authors: Ushimaru, R., Mori, T., Abe, I., Liu, H.-w.
PDB entry 8wm3: Cryo-EM structure of ACE2-SIT1 complex with tiagabine
Classification: TRANSPORT PROTEIN/HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2023-10-02
Authors: Yan, R., Hu, Z., Dai, L., Zhang, T.
PDB entry 8wm4: Cryo-EM structure of DiCas7-11 in complex with crRNA
Classification: IMMUNE SYSTEM
Source organism: Desulfonema ishimotonii; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-10-02
Authors: Ma, H.Y., Tang, X.D.
PDB entry 8wm5: multidrug transporter EfpA from Mycobacterium tuberculosis bound with lipids
Classification: TRANSPORT PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-10-03
Authors: Wang, S., Liao, M.
PDB entry 8wm6: The structure of PSI-CAC(L-14)of R.salina at 2.7 angstroms resolution
Classification: PHOTOSYNTHESIS
Source organism: Rhodomonas salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-03
Authors: Zhang, S.M., Si, L., Li, M.
PDB entry 8wm7: Cryo-EM structure of cyanobacterial nitrate/nitrite transporter NrtBCD in complex with signalling protein PII
Classification: MEMBRANE PROTEIN
Source organism: Nostoc sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2023-10-03
Authors: Li, B., Zhou, C.Z., Chen, Y.X., Jiang, Y.L.
PDB entry 8wm8: Cryo-EM structure of cyanobacterial nitrate/nitrite transporter NrtBCD in complex with nitrate
Classification: MEMBRANE PROTEIN
Source organism: Nostoc sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2023-10-03
Authors: Li, B., Zhou, C.Z., Chen, Y.X., Jiang, Y.L.
PDB entry 8wm9: Fzd4/DEP complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2023-10-03
Authors: He, Y., Qian, Y.
PDB entry 8wma: Fzd4/DEP complex (local refined)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2023-10-03
Authors: He, Y., Qian, Y.
PDB entry 8wmb: Crystal Structure of Drosophila melanogaster D46A Dopamine N-Acetyltransferase in Complex with Acetyl-CoA
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.645 Å
Deposited: 2023-10-03
Authors: Wu, C.Y., Hu, I.C., Cheng, H.C., Lyu, P.C.
PDB entry 8wmc: Cryo-EM structure of DiCas7-11-crRNA in complex with regulator
Classification: IMMUNE SYSTEM
Source organism: Desulfonema ishimotonii; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-03
Authors: Ma, H.Y., Tang, X.D.
PDB entry 8wmd: Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-2 state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2023-10-03
Authors: Nomai, T., Anraku, Y., Kita, S., Hashiguchi, T., Maenaka, K.
PDB entry 8wme: Crystal Structure of Drosophila melanogaster D46A Dopamine N-Acetyltransferase
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.283 Å
Deposited: 2023-10-03
Authors: Wu, C.Y., Hu, I.C., Cheng, H.C., Lyu, P.C.
PDB entry 8wmf: Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-1 state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2023-10-03
Authors: Nomai, T., Anraku, Y., Kita, S., Hashiguchi, T., Maenaka, K.
PDB entry 8wmg: Structure of ConA/Man3
Classification: SUGAR BINDING PROTEIN
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-10-03
Authors: Li, L., Chen, G.
PDB entry 8wmh: Structure of CbCas9 bound to 6-nucleotide complementary DNA substrate
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Chryseobacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-10-03
Authors: Zhang, S., Lin, S., Liu, J.J.G.
PDB entry 8wmi: Cryo-EM structure of DiCas7-11 mutant in complex with crRNA
Classification: IMMUNE SYSTEM
Source organism: Desulfonema ishimotonii; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2023-10-03
Authors: Ma, H.Y., Tang, X.D.
PDB entry 8wmj: structure of PSI-11CAC complex at Logrithmic growth phase
Classification: PHOTOSYNTHESIS
Source organism: Rhodomonas salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-03
Authors: Zhang, S.M., Si, L., Li, M.
PDB entry 8wmk: Structure of ConA/Man2
Classification: SUGAR BINDING PROTEIN
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2023-10-03
Authors: Li, L., Chen, G.
PDB entry 8wml: Cryo-EM structure of Cas7-11-crRNA bound to N-terminal of TPR-CHAT
Classification: IMMUNE SYSTEM
Source organism: Desulfonema ishimotonii; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-10-03
Authors: Ma, H.Y., Tang, X.D.
PDB entry 8wmm: Structure of CbCas9-PcrIIC1 complex bound to 28-bp DNA substrate (20-nt complementary)
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Chryseobacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-10-04
Authors: Zhang, S., Lin, S., Liu, J.J.G.
PDB entry 8wmn: Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (symmetric 20-nt complementary)
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Chryseobacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2023-10-04
Authors: Zhang, S., Lin, S., Liu, J.J.G.
PDB entry 8wmo: Crystal structure analysis of tubulin and heterocyclic podophyllotoxins complex for anticancer agents
Classification: CELL CYCLE
Source organism: Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2023-10-04
Authors: Zhao, W., Bi, J.
PDB entry 8wmp: Crystal Structure of Mutant HisB from Mycobacterium tuberculosis
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-10-04
Authors: Tiwari, S., Mohini, M., Ahmad, M., Pal, R.K., Biswal, B.K.
PDB entry 8wmq: trans-Zeatin bound state of Arabidopsis AZG1 at pH5.5
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-04
Authors: Xu, L., Guo, J.
PDB entry 8wms: Crystal structure of human DPPA3 in complex with human UHRF1 PHD domain
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-10-04
Authors: Shiraishi, N., Arita, K.
PDB entry 8wmt: Crystal structure of cis-epoxysuccinic hydrolase from Bradyrhizobium mercantei
Classification: HYDROLASE
Source organism: Bradyrhizobium mercantei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-10-04
Authors: Han, Y., Kong, X.D., Xu, J.H.
PDB entry 8wmu: Structural basis of tubulin and heterocyclic podophyllotoxins complex for anticancer agents with dual-binding sites
Classification: CELL CYCLE
Source organism: Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-10-04
Authors: Zhao, W., Bi, J.
PDB entry 8wmv: The structure of PSI-14CAC complex at stationary growth phase
Classification: PHOTOSYNTHESIS
Source organism: Rhodomonas salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-10-04
Authors: Zhang, S.M., Si, L., Li, M.
PDB entry 8wmw: The structure of PSI-11CAC at the stationary growth phase
Classification: PHOTOSYNTHESIS
Source organism: Rhodomonas salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-04
Authors: Zhang, S.M., Si, L., Li, M.
PDB entry 8wmy: Crystal structure of YqeK in complex with MG and ADP.
Classification: HYDROLASE
Source organism: Staphylococcus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2023-10-05
Authors: Mo, X.
PDB entry 8wn5: Crystal structure of GH1 beta-glucosidase Td2F2 E352Q glucose complex
Classification: HYDROLASE
Source organism: metagenomes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-10-05
Authors: Lin, C.C., Lu, T.J., Fushinobu, S.
PDB entry 8wn6: Crystal structure of GH1 beta-glucosidase Td2F2 E352Q sophorose complex
Classification: HYDROLASE
Source organism: metagenomes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2023-10-05
Authors: Lin, C.C., Lu, T.J., Fushinobu, S.
PDB entry 8wn8: CryoEM structure of ZIKV rsNS1
Classification: VIRAL PROTEIN
Source organism: Zika virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-05
Authors: Chew, B.L.A., Luo, D.
PDB entry 8wna: Crystal structure of GH1 beta-glucosidase Td2F2 E352Q laminaribiose complex
Classification: HYDROLASE
Source organism: metagenomes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2023-10-05
Authors: Lin, C.C., Lu, T.J., Fushinobu, S.
PDB entry 8wnb: Crystal structure of d(ACGCCGT/ACGICGT)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2023-10-05
Authors: Hou, M.H., Huang, H.T., Lin, S.M.
PDB entry 8wnd: Crystal structure of Saccharomyces cerevisiae isoleucyl-tRNA synthetase in complex with tRNA(Ile) and isoleucine
Classification: LIGASE/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-10-05
Authors: Chen, B., Yi, F., Zhou, H.
PDB entry 8wnf: Crystal structure of H. pylori isoleucyl-tRNA synthetase (HpIleRS) in apo form
Classification: LIGASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-10-05
Authors: Guo, Y., Li, S., Zhang, T.
PDB entry 8wng: Crystal structure of H. pylori isoleucyl-tRNA synthetase (HpIleRS) in complex with Ile
Classification: LIGASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-10-05
Authors: Guo, Y., Li, S., Zhang, T.
PDB entry 8wnh: Crystal structure of cis-epoxysuccinate hydrolase from Rhodococcus opacus
Classification: HYDROLASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.773 Å
Deposited: 2023-10-05
Authors: Han, Y., Kong, X.D., Xu, J.H.
PDB entry 8wni: Crystal structure of H. pylori isoleucyl-tRNA synthetase (HpIleRS) in complex with Val
Classification: LIGASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-10-06
Authors: Guo, Y., Li, S., Zhang, T.
PDB entry 8wnj: Crystal structure of H. pylori isoleucyl-tRNA synthetase (HpIleRS) in complex with Ile-AMP
Classification: LIGASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2023-10-06
Authors: Guo, Y., Li, S., Zhang, T.
PDB entry 8wnp: ZIKV rsNS1 in complex with Fab AA12 and anti-fab nanobody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama; Zika virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-06
Authors: Chew, B.L.A., Luo, D.
PDB entry 8wns: Cryo EM map of SLC7A10 in the apo state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-10-06
Authors: Li, Y.N., Guo, Y.Y., Dai, L., Yan, R.H.
PDB entry 8wnt: Cryo EM map of SLC7A10 with L-Alanine substrate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-10-06
Authors: Li, Y.N., Guo, Y.Y., Dai, L., Yan, R.H.
PDB entry 8wnu: ZIKV rsNS1 in complex with Fab GB5 and anti-fab nanobody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama; Zika virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-10-06
Authors: Chew, B.L.A., Luo, D.
PDB entry 8wnw: the structure of PsaQ
Classification: PHOTOSYNTHESIS
Source organism: Rhodomonas salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-06
Authors: Zhang, S.M., Si, L., Li, M.
PDB entry 8wny: Cryo EM map of SLC7A10-SLC3A2 complex in the D-serine bound state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-06
Authors: Li, Y.N., Guo, Y.Y., Dai, L., Yan, R.H.
PDB entry 8wo0: CryoEM structure of ZIKV rsNS1 filament
Classification: VIRAL PROTEIN
Source organism: Zika virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2023-10-06
Authors: Chew, B.L.A., Luo, D.
PDB entry 8wo1: Cryo-EM Structure of Human TLR4/MD-2/DLAM5 Complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.24 Å
Deposited: 2023-10-06
Authors: Fu, Y., Kim, H., Zamyatina, A., Kim, H.M.
PDB entry 8wo2: Crystal structure of H. pylori isoleucyl-tRNA synthetase (HpIleRS) in complex with Val-AMP
Classification: LIGASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2023-10-06
Authors: Guo, Y., Li, S., Zhang, T.
PDB entry 8wo3: Crystal structure of H. pylori isoleucyl-tRNA synthetase (HpIleRS) in complex with Mupirocin
Classification: LIGASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-10-06
Authors: Guo, Y., Li, S., Zhang, T.
PDB entry 8wo4: ZIKV rsNS1 in complex with Fab EB9 and anti-fab nanobody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama; Zika virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-10-06
Authors: Chew, B.L.A., Luo, D.
PDB entry 8wo5: Cryo-EM structure of the intact flagellar motor-hook complex in the CCW state
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.4 Å
Deposited: 2023-10-06
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wo7: Apo state of Arabidopsis AZG1 T440Y
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-06
Authors: Xu, L., Guo, J.
PDB entry 8wo8: Crystal Structure of an RNA-binding protein, FAU-1, from Pyrococcus furiosus
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli; Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2023-10-06
Authors: Kawai, G., Okada, K., Baba, S., Sato, A., Sakamoto, T., Kanai, A.
PDB entry 8wo9: Duck major histocompatibility complex class-1 02JD-IMFSNKMAR
Classification: IMMUNE SYSTEM
Source organism: Anas platyrhynchos; unidentified influenza virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-10-06
Authors: Tang, Z., Zhang, N.
PDB entry 8woc: Cryo-EM structure of SIR2/HerA complex
Classification: IMMUNE SYSTEM
Source organism: Paenibacillus sp. 453mf
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2023-10-07
Authors: Yu, G., Liao, F., Li, X., Li, Z., Zhang, H.
PDB entry 8wod: Cryo-EM structure of SIR2/HerA complex
Classification: IMMUNE SYSTEM
Source organism: Paenibacillus sp. 453mf
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2023-10-07
Authors: Yu, G., Liao, F., Li, X., Li, Z., Zhang, H.
PDB entry 8woe: Cryo-EM structure of the intact flagellar motor-hook complex in the CW state
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-10-07
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8wof: Cryo-EM structure of SIR2/HerA complex
Classification: IMMUNE SYSTEM
Source organism: Paenibacillus sp. 453mf
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-07
Authors: Yu, G., Liao, F., Li, X., Li, Z., Zhang, H.
PDB entry 8wog: Cryo-EM structure of SUCR1 in complex with succinate and Gi protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2023-10-07
Authors: Liu, A., Ye, R.D.
PDB entry 8woh: human dsDNA sensor CCDC25 complexed with 18bp DNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-10-07
Authors: Wen, Y., Wu, B.X.
PDB entry 8woi: Structure of the wild-type Arabidopsis ABCB19 in the apo state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-10-07
Authors: Ying, W., Wei, H., Liu, X., Sun, L.
PDB entry 8woj: Structure of RxLR121 effector from phytophthora capsici
Classification: IMMUNOSUPPRESSANT
Source organism: Phytophthora capsici LT1534
Experimental method: X-RAY DIFFRACTION
Resolution: 1.768 Å
Deposited: 2023-10-07
Authors: Yang, C.C., Zhang, X.G.
PDB entry 8wok: Crystal structure of PL7 family alginate lyase AlyMc
Classification: LYASE
Source organism: Saccharina japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-10-07
Authors: Yang, M., Mou, H.J., Kong, Q.
PDB entry 8wol: Cryo-EM structure of the Mmp1 encapasulin from Mycobacterium smegmatis
Classification: STRUCTURAL PROTEIN
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-10-07
Authors: Zhang, M., Tang, Y., Gao, Y., Liu, X., Lan, W., Liu, Y., Ma, M.
PDB entry 8wom: Structure of the wild-type Arabidopsis ABCB19 in the brassinolide-bound state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-07
Authors: Ying, W., Wei, H., Liu, X., Sun, L.
PDB entry 8won: Cryo-EM structure of the 10-subunits Mmp1 complex from Mycobacterium smegmatis
Classification: STRUCTURAL PROTEIN
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2023-10-07
Authors: Zhang, M., Tang, Y., Gao, Y., Liu, X., Lan, W., Liu, Y., Ma, M.
PDB entry 8woo: Structure of the wild-type Arabidopsis ABCB19 in the brassinolide and AMP-PNP bound state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-10-07
Authors: Ying, W., Wei, H., Liu, X., Sun, L.
PDB entry 8wop: Crystal structure of Arabidopsis thaliana UDP-glucose 4-epimerase 2 (AtUGE2) complexed with UDP, wild-type
Classification: ISOMERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-10-07
Authors: Matsumoto, M., Umezawa, A., Kotake, T., Fushinobu, S.
PDB entry 8woq: Cryo-EM structure of human SIDT1 protein with C1 symmetry at neutral pH
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2023-10-07
Authors: Liu, W., Tang, M., Wang, J., Zhang, X., Wu, S., Ru, H.
PDB entry 8wor: Cryo-EM structure of human SIDT1 protein with C2 symmetry at neutral pH
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2023-10-07
Authors: Liu, W., Tang, M., Wang, J., Zhang, X., Wu, S., Ru, H.
PDB entry 8wos: Cryo-EM structure of human SIDT1 protein with C1 symmetry at low pH
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2023-10-07
Authors: Liu, W., Tang, M., Wang, J., Zhang, X., Wu, S., Ru, H.
PDB entry 8wot: Cryo-EM structure of human SIDT1 protein with C2 symmetry at low pH
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2023-10-07
Authors: Liu, W., Tang, M., Wang, J., Zhang, X., Wu, S., Ru, H.
PDB entry 8wou: The crystal structure of aspartate aminotransferases Lpg0070 from Legionella pneumophila
Classification: TRANSFERASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-10-07
Authors: Gao, Y.S., Hua, L., Xie, R.
PDB entry 8wov: Crystal structure of Arabidopsis thaliana UDP-glucose 4-epimerase 2 (AtUGE2) complexed with UDP, G233A mutant
Classification: ISOMERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-10-07
Authors: Matsumoto, M., Umezawa, A., Kotake, T., Fushinobu, S.
PDB entry 8wow: Crystal structure of Arabidopsis thaliana UDP-glucose 4-epimerase 2 (AtUGE2) complexed with UDP, I160L/G233A mutant
Classification: ISOMERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-10-08
Authors: Matsumoto, M., Umezawa, A., Kotake, T., Fushinobu, S.
PDB entry 8wox: Cryo-EM structure of SARS-CoV-2 prototype RBD in complex with rabbit ACE2 (local refinement)
Classification: VIRAL PROTEIN
Source organism: Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2023-10-08
Authors: Li, L.J., Shi, K.Y., Yu, G.H., Gao, G.F.
PDB entry 8woy: Cryo-EM structure of SARS-CoV-2 Omicron BA.4/5 RBD in complex with rabbit ACE2 (local refinement)
Classification: VIRAL PROTEIN
Source organism: Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2023-10-08
Authors: Li, L.J., Shi, K.Y., Yu, G.H., Gao, G.F.
PDB entry 8woz: Cryo-EM structure of SARS-CoV RBD in complex with rabbit ACE2
Classification: VIRAL PROTEIN
Source organism: Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-10-08
Authors: Li, L.J., Shi, K.Y., Yu, G.H., Gao, G.F.
PDB entry 8wp0: Structure of the Arabidopsis E529Q/E1174Q ABCB19 in the ATP bound state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-10-08
Authors: Ying, W., Wei, H., Liu, X., Sun, L.
PDB entry 8wp1: Cryo-EM structure of SUCR1 in complex with cis-epoxysuccinic acid and Gi proteins
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2023-10-08
Authors: Liu, A., Ye, R.D.
PDB entry 8wp2: MapSPARTA tetramer bound with guide-target
Classification: RNA BINDING PROTEIN/DNA/RNA
Source organism: Maribacter polysiphoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-08
Authors: Huang, P.P., Li, Z.X., Guo, L.J., Xiao, Y.B., Chen, M.R.
PDB entry 8wp5: Crystal structure of LbUGT1 in complex with UDP
Classification: TRANSFERASE
Source organism: Lycium barbarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57006 Å
Deposited: 2023-10-08
Authors: Hu, D., Wang, G.Q.
PDB entry 8wp6: Crystal structure of a TetR family regulator AmvR from Acinetobacter baumannii (APO FORM)
Classification: TRANSCRIPTION
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-10-09
Authors: Ma, J.M., Ge, H.H., Wang, N.
PDB entry 8wp7: Crystal structure of a TetR family regulator AmvR from Acinetobacter baumannii with spermidine bound
Classification: TRANSCRIPTION
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2023-10-09
Authors: Ma, J.M., Ge, H.H., Wang, N.
PDB entry 8wp8: Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 RBD in complex with human ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2023-10-09
Authors: Li, L.J., Gu, Y.H., Qi, J.X., Gao, G.F.
PDB entry 8wp9: Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
Classification: CHAPERONE
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2023-10-09
Authors: Lee, J., Ryu, B., Kim, T., Kim, K.K.
PDB entry 8wpa: Crystal Structure of the Acinetobacter baumannii LysR family regulator AceR DNA-binding domain (H32)
Classification: TRANSCRIPTION
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-10-09
Authors: Ma, J.M., Ge, H.H., Wang, N.
PDB entry 8wpc: Complex structure of AtHPPD with LB553
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.797 Å
Deposited: 2023-10-09
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8wpd: Complex structure of AtHPPD with YH20009
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2023-10-09
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8wpe: Structure of monkeypox virus polymerase complex F8-A22-E4-H5 (tag-free A22) with exogenous DNA
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-10
Authors: Wang, X., Li, N., Gao, N.
PDB entry 8wpf: Structure of monkeypox virus polymerase complex F8-A22-E4-H5 with exogenous DNA bearing one abasic site
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-10
Authors: Wang, X., Li, N., Gao, N.
PDB entry 8wpg: Human calcium-sensing receptor bound with cinacalcet in detergent
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-10
Authors: Ling, S.L., Meng, X.Y., Tian, C.L.
PDB entry 8wph: Anabaena McyI with prebound NAD
Classification: OXIDOREDUCTASE
Source organism: Anabaena sp. 90
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-10-10
Authors: Wang, X., Yin, Y., Duan, Y., Liu, L.
PDB entry 8wpi: Anabaena McyI with prebound NAD and soaked NADP
Classification: OXIDOREDUCTASE
Source organism: Anabaena sp. 90
Experimental method: X-RAY DIFFRACTION
Resolution: 2.201 Å
Deposited: 2023-10-10
Authors: Wang, X., Yin, Y., Duan, Y., Liu, L.
PDB entry 8wpj: Anabaena McyI with prebound NAD and soaked NAD
Classification: OXIDOREDUCTASE
Source organism: Anabaena sp. 90
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-10-10
Authors: Wang, X., Yin, Y., Duan, Y., Liu, L.
PDB entry 8wpk: Structure of monkeypox virus polymerase complex F8-A22-E4-H5 with exgenous DNA
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-10
Authors: Wang, X., Li, N., Gao, N.
PDB entry 8wpl: Cryo-EM structure of the human TRPC1/C4 heteromer
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-10-10
Authors: Won, J., Jeong, H., Lee, H.H.
PDB entry 8wpm: Cryo-EM structure of the human TRPC1/C4 heteromer in complex with Pico145
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2023-10-10
Authors: Won, J., Jeong, H., Lee, H.H.
PDB entry 8wpn: Cryo-EM structure of the human TRPC4 in lipid nanodiscs
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2023-10-10
Authors: Won, J., Jeong, H., Lee, H.H.
PDB entry 8wpo: Anabaena McyI R166A with prebound NAD and citrate
Classification: OXIDOREDUCTASE
Source organism: Anabaena sp. 90
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-10-10
Authors: Wang, X., Yin, Y., Duan, Y., Liu, L.
PDB entry 8wpp: Structure of monkeypox virus polymerase complex F8-A22-E4-H5 with endogenous DNA
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-10
Authors: Wang, X., Li, N., Gao, N.
PDB entry 8wpq: Anabaena McyI R166M with prebound NAD and citrate
Classification: OXIDOREDUCTASE
Source organism: Anabaena sp. 90
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-10-10
Authors: Wang, X., Yin, Y., Duan, Y., Liu, L.
PDB entry 8wpr: Anabaena McyI R166A with prebound NAD and malate
Classification: OXIDOREDUCTASE
Source organism: Anabaena sp. 90
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-10-10
Authors: Wang, X., Yin, Y., Duan, Y., Liu, L.
PDB entry 8wps: Anabaena McyI R166M with prebound NAD and malate
Classification: OXIDOREDUCTASE
Source organism: Anabaena sp. 90
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-10-10
Authors: Wang, X., Yin, Y., Duan, Y., Liu, L.
PDB entry 8wpt: Truncated mutant (1-171) of ferritin from Ureaplasma diversum
Classification: METAL BINDING PROTEIN
Source organism: Ureaplasma diversum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2023-10-10
Authors: Wang, W.M., Xi, H.F., Gong, W.J., Ma, D.Y., Wang, H.F.
PDB entry 8wpu: Human calcium-sensing receptor(CaSR) bound to cinacalcet in complex with Gq protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-10
Authors: Ling, S.L., Meng, X.Y., Tian, C.L.
PDB entry 8wpv: Truncated mutant (1-171) of ferritin from Ureaplasma diversum soaked in Fe2+ solution for 30min
Classification: METAL BINDING PROTEIN
Source organism: Ureaplasma diversum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.059 Å
Deposited: 2023-10-10
Authors: Wang, W.M., Xi, H.F., Gong, W.J., Ma, D.Y., Wang, H.F.
PDB entry 8wpw: Cryo-EM structure of SARS-CoV-2 XBB.1.5 receptor-binding domain (RBD) complexed with CB6 mutant,S309, and S304 antibodies
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2023-10-10
Authors: Su, C., Qi, J.X., Gao, G.F.
PDB entry 8wpy: Cryo-EM structure of SARS-CoV-2 receptor-binding domain (RBD) complexed with CB6 mutant,S309, and S304 antibodies
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2023-10-10
Authors: Su, C., Qi, J.X., Gao, G.F.
PDB entry 8wpz: Cryo-ET structure of RuBisCO at 3.9 angstroms from Synechococcus elongatus PCC 7942
Classification: PHOTOSYNTHESIS
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-10-10
Authors: Kong, W.W., Jiang, Y.L., Zhou, C.Z.
PDB entry 8wq0: Cryo-EM structure of WIV1 spike glycoprotein (the closed state)
Classification: VIRAL PROTEIN
Source organism: Bat SARS-like coronavirus WIV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2023-10-10
Authors: Wang, X., Qiao, S.
PDB entry 8wq2: Structural basis of translation inhibition by a valine tRNA-derived fragment
Classification: RIBOSOME
Source organism: Haloferax volcanii; Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-10-10
Authors: Wang, Y.H., Zhou, J.
PDB entry 8wq3: Crystal structure of the C-terminal RRM domain of an RBP
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2023-10-10
Authors: Chen, X., Jiang, M., Yang, Z., Chen, X., Wei, Q., Guo, S., Wang, M.
PDB entry 8wq4: Structural basis of translation inhibition by a valine tRNA-derived fragment
Classification: RIBOSOME
Source organism: Haloferax volcanii; Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.53 Å
Deposited: 2023-10-11
Authors: Wang, Y.H., Zhou, J.
PDB entry 8wq5: Crystal structure of the C-terminal RRM domain of an RBP in complex with ssDNA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-10-11
Authors: Chen, X., Yang, Z., Chen, X., Wei, Q., Guo, S., Jiang, M., Wang, M.
PDB entry 8wq6: Durio zibethinus trypsin inhibitor DzTI-5 (lattice translocation disorder)
Classification: PLANT PROTEIN
Source organism: Durio zibethinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-10-11
Authors: Deentanya, P., Wangkanont, K.
PDB entry 8wq7: Crystal structure of d(CGTATACG)2 with a four-carbon linker containing diacridine compound
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2023-10-11
Authors: Huang, S.C., Satange, R.B., Hou, M.H.