LiteFold/PDB huggingface dataset:
PDB entry 9k0o: Cryo-EM structure of human taurine transporter TauT bound with GAA in an intermediate state during the transport cycle
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-10-15
Authors: Du, B., Yan, K.
PDB entry 9k0x: Cryo-EM structure of ATP-bound P2Y purinoceptor 2-miniGq-Nb35 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-10-16
Authors: Lan, B., Zhang, S., Liu, X., Lin, B.
PDB entry 9k0z: EF-G2 bound 70S ribosome complex of M. smegmatis
Classification: RIBOSOME
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2024-10-16
Authors: Sengupta, J., Baid, P.
PDB entry 9k10: EF-G2 bound 50S ribosome subunit complex of M. smegmatis
Classification: RIBOSOME
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-10-16
Authors: Sengupta, J., Baid, P.
PDB entry 9k11: A cryo-EM structure of B. oleracea RNA polymerase V in complex with 0U scaffold at 2.96 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-10-16
Authors: Xie, G., Du, X., Du, J.
PDB entry 9k12: A cryo-EM structure of B. oleracea RNA polymerase V in complex with 1U sacffold at 3.5 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2024-10-16
Authors: Xie, G., Du, X., Du, J.
PDB entry 9k13: A cryo-EM structure of B. oleracea RNA polymerase V in complex with 2U sacffold at 3.04 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-10-16
Authors: Xie, G., Du, X., Du, J.
PDB entry 9k14: A cryo-EM structure of B. oleracea RNA polymerase V in complex with 3U sacffold at 3.8 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-10-16
Authors: Xie, G., Du, X., Du, J.
PDB entry 9k15: A cryo-EM structure of B. oleracea RNA polymerase V in complex with 4U sacffold at 3.32 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2024-10-16
Authors: Xie, G., Du, X., Du, J.
PDB entry 9k16: A cryo-EM structure of B. oleracea RNA polymerase V in complex with 5U sacffold at 3.19 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2024-10-16
Authors: Xie, G., Du, X., Du, J.
PDB entry 9k17: A cryo-EM structure of B. oleracea RNA polymerase V in complex with 6U sacffold at 3.04 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-10-16
Authors: Xie, G., Du, X., Du, J.
PDB entry 9k18: A cryo-EM structure of B. oleracea RNA polymerase V in complex with 7U sacffold at 3.42 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2024-10-16
Authors: Xie, G., Du, X., Du, J.
PDB entry 9k19: A cryo-EM structure of B. oleracea RNA polymerase V in complex with 8U sacffold at 4.06 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.06 Å
Deposited: 2024-10-16
Authors: Xie, G., Du, X., Du, J.
PDB entry 9k1b: Cryo-EM structure of human taurine transporter TauT bound with taurine in an occluded state
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2024-10-16
Authors: Du, B., Yan, K.
PDB entry 9k1c: Cryo-EM structure of the DHA bound FFA1-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-10-16
Authors: Han, S., Wu, B., Zhao, Q.
PDB entry 9k1d: Cryo-EM structure of the butyrate bound FFA2-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2024-10-16
Authors: Han, S., Wu, B., Zhao, Q.
PDB entry 9k1e: Structural insights into photosystem I complex of Bryopsis corticulans
Classification: PHOTOSYNTHESIS
Source organism: Bryopsis corticulans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-10-16
Authors: Liu, X.Y., Wang, W.D.
PDB entry 9k1f: Cryo-EM structure of human taurine transporter TauT bound with GABA in an intermediate conformation in the transport cycle
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2024-10-16
Authors: Du, B., Yan, K.
PDB entry 9k1g: COMPLEX STRUCTURE OF ENDO-1,3-FUCANASE (FUN174Sb) FROM GH174 FAMILY WITH FUCOTETRAOSE
Classification: HYDROLASE
Source organism: Spartobacteria bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-10-16
Authors: Chen, G.N., Chang, Y.G.
PDB entry 9k1h: Cryo-EM structure of human taurine transporter TauT bound with P4S in an inward open state
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2024-10-16
Authors: Du, B., Yan, K.
PDB entry 9k1i: Cryo-EM structure of huamn taurine transporter bound with I4AA in inward-open state
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-10-16
Authors: Du, B., Yan, K.
PDB entry 9k1j: Crystal Structure of 6D1-Ab-ohrB complex
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-10-16
Authors: Huang, W., Hu, C.X.
PDB entry 9k1k: Yeast Cytosine Deaminase mutant-M100H
Classification: ANTITUMOR PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.439 Å
Deposited: 2024-10-16
Authors: Yung, K.W.Y., Zheng, J.L., Chan, M.K.
PDB entry 9k1l: Complex structure of CNK2 and SAMD12
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-10-16
Authors: Lin, Z., Chen, K., Zhang, M.
PDB entry 9k1m: Crystal structure of xylanase inhibitor protein (OsXIP) from rice
Classification: PLANT PROTEIN
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-10-16
Authors: Ohnuma, T., Takeshita, D.
PDB entry 9k1n: Crystal structure of family 11 xylanase in complex with inhibitor (OsXIP)
Classification: PROTEIN BINDING
Source organism: Oryza sativa subsp. japonica; Rhizopus arrhizus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.205 Å
Deposited: 2024-10-16
Authors: Ohnuma, T., Takeshita, D.
PDB entry 9k1o: Structure of SF3B core in complex with the 22-nt histone mRNA(SF3B-22-nt histone mRNA)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-10-16
Authors: Zhang, Y., Yin, C., Huang, J.
PDB entry 9k1p: crystal structure of Rtks- C2221
Classification: SIGNALING PROTEIN
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2024-10-16
Authors: Xu, M., Ran, T., Wang, W.
PDB entry 9k1q: Structure of SF3B core in complex with the 101-nt histone mRNA(SF3B-101-nt histone mRNA)
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-10-16
Authors: Zhang, Y., Yin, C., Huang, J.
PDB entry 9k1r: Structure of SF3B core in complex with the intron-U2 snRNA (SF3B-intron-U2 snRNA)
Classification: SPLICING/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-10-16
Authors: Zhang, Y., Yin, C., Huang, J.
PDB entry 9k1s: Crystal structure of human granzyme A in complex with GSDMB-C domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2024-10-16
Authors: Zhong, X., Hou, Y.J., Ding, J.
PDB entry 9k1t: Crystal structure of mouse granzyme A
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2024-10-16
Authors: Zhong, X., Hou, Y.J., Ding, J.
PDB entry 9k1u: crystal structure of Rtks and Ppka complex
Classification: SIGNALING PROTEIN
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.792 Å
Deposited: 2024-10-16
Authors: Xu, M., Ran, T., Wang, W.
PDB entry 9k1v: Cryo-EM structure of human taurine transporter bound with 5AVA in an inward-open state
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-10-16
Authors: Du, B., Yan, K.
PDB entry 9k1w: Structure of the SF3B core, harboring the K700E mutation in SF3B1, in complex with intron-U2 snRNA
Classification: SPLICING/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-10-16
Authors: Zhang, Y., Yin, C., Huang, J.
PDB entry 9k1x: Cryo-EM structure of human taurine transporter TauT bound with GES in an occluded state
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-10-16
Authors: Du, B., Yan, K.
PDB entry 9k1y: Structure of the SF3B core, harboring the R625H mutation in SF3B1, in complex with intron-U2 snRNA
Classification: SPLICING/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-10-16
Authors: Zhang, Y., Yin, C., Huang, J.
PDB entry 9k1z: Cryo-EM structure of human taurine transporter bound with nipecotic acid in an inward open state
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2024-10-16
Authors: Du, B., Yan, K.
PDB entry 9k20: Cryo-EM structure of ATP-bound P2Y purinoceptor 2-miniGo-scFv16 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-10-16
Authors: Lan, B., Zhang, S., Liu, X., Lin, B.
PDB entry 9k21: Cryo-EM structure of human taurine transporter TauT bound with homotaurine in an inward-open state
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2024-10-16
Authors: Du, B., Yan, K.
PDB entry 9k22: A novel histone H3K27 reader, CBFA2T2, inhibits H3K27me3 demethylation and tumor growth by regulating metabolic genes and metabolite levels
Classification: ANTITUMOR PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2024-10-16
Authors: Li, H.T., Ou, Y.T., Guo, R., He, S.F.
PDB entry 9k23: Cryo-EM structure of alpha-synuclein Mini S fibril
Classification: PROTEIN FIBRIL
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-10-17
Authors: Xia, W.C., Liu, C.
PDB entry 9k24: Cryo-EM structure of alpha-synuclein Mini P fibril
Classification: PROTEIN FIBRIL
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-10-17
Authors: Xia, W.C., Liu, C.
PDB entry 9k25: Cryo-EM structure of apo-P2Y purinoceptor 2-miniGq-Nb35 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-10-17
Authors: Lan, B., Zhang, S., Liu, X., Lin, B.
PDB entry 9k26: PrRP31 bound prolactin-releasing peptide receptor coupled with Gi protein complex
Classification: PEPTIDE BINDING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-10-17
Authors: Wu, Z., Du, Y., Chen, G.
PDB entry 9k27: PrRP31 bound prolactin-releasing peptide receptor coupled with Gq protein complex
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-10-17
Authors: Wu, Z., Du, Y., Chen, G.
PDB entry 9k29: Structure of the Salmonella flagellar FliPQR complex reconstituted in the peptidisc
Classification: PROTEIN TRANSPORT
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-10-17
Authors: Kinoshita, M., Miyata, T., Makino, F., Imada, K., Namba, K., Minamino, T.
PDB entry 9k2a: Structure of ClpP from Staphylococcus aureus in complex with ZY27
Classification: ANTIBIOTIC
Source organism: Staphylococcus aureus (strain Mu3 / ATCC 700698)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-10-17
Authors: Wei, B.Y., Wang, P.Y., Wu, W., Zhang, T., Yang, C.-G.
PDB entry 9k2b: Structure of ClpP from Staphylococcus aureus in complex with ZY18
Classification: ANTIBIOTIC
Source organism: Staphylococcus aureus subsp. aureus Mu3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-10-17
Authors: Wei, B.Y., Wang, P.Y., Wu, W., Zhang, T., Yang, C.-G.
PDB entry 9k2c: Structure of ClpP from Staphylococcus aureus in complex with ZY1
Classification: ANTIBIOTIC
Source organism: Staphylococcus aureus subsp. aureus Mu3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-10-17
Authors: Li, J.H., Wu, W., Zhang, T., Yang, C.-G.
PDB entry 9k2d: Structure of ClpP from Staphylococcus aureus in complex with ZY39
Classification: ANTIBIOTIC
Source organism: Staphylococcus aureus subsp. aureus Mu3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-10-17
Authors: Wei, B.Y., Wang, P.Y., Wu, W., Zhang, T., Yang, C.-G.
PDB entry 9k2e: Crystal structure of mSMPDL3B-dimer
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-10-17
Authors: Zhang, C.G., Hou, Y.F., Liu, P.Y., Fan, S.L.
PDB entry 9k2f: Crystal Structure of CyaF/SAH in open conformational state
Classification: BIOSYNTHETIC PROTEIN
Source organism: Actinoalloteichus caeruleus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-10-17
Authors: Chen, R.J., Zhang, L.P., Zhu, Y.G., Zhang, C.S.
PDB entry 9k2g: Human RNA Polymerase III de novo transcribing complex 13 (TC13)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-10-17
Authors: Wang, Q., Ren, Y., Jin, Q., Chen, X., Xu, Y.
PDB entry 9k2h: Crystal structure of the carboxy-terminal channel-forming domain of Colicin Ib
Classification: ANTIMICROBIAL PROTEIN
Source organism: Shigella flexneri 2b
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2024-10-17
Authors: Yang, J., Hu, N.-J.
PDB entry 9k2i: Rac1 epitope specific TCR 5934 binding to Rac1P29S-HLA-A2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2024-10-17
Authors: Yang, D.D., Wu, D.C.
PDB entry 9k2j: X-ray crystal structure of 3-hydroxyisobutyrate dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2024-10-17
Authors: Tang, K.
PDB entry 9k2k: Structure of ClpP from Staphylococcus aureus in complex with ZY7
Classification: ANTIBIOTIC
Source organism: Staphylococcus aureus (strain Mu3 / ATCC 700698)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2024-10-17
Authors: Li, J.H., Wu, W., Zhang, T., Yang, C.-G.
PDB entry 9k2l: Crystal structure of Plasmoredoxin, a disulfide oxidoreductase from Plasmodium falciparum crystallized in the presence of Glutathione(GSH)
Classification: OXIDOREDUCTASE
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-10-17
Authors: Panicker, L.
PDB entry 9k2n: Crystal structure of Glutamine Synthetase-apo
Classification: LIGASE
Source organism: Acinetobacter baumannii AB0057
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2024-10-17
Authors: Chandrasekaran, P., Killivalavan, A., Vaigundan, D., Yuvaraj, I., Manju, B., Sekar, K.
PDB entry 9k2o: Local refinement of A7 nanotubes assembled from baculovirus capsid protein
Classification: VIRAL PROTEIN
Source organism: Autographa californica nuclear polyhedrosis virus; Schistosoma japonicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-10-17
Authors: Tian, K., Rao, G., Fu, Y., Cao, S.
PDB entry 9k2p: The crystal structure of CapA1 from Capnocytophaga ochracea
Classification: BIOSYNTHETIC PROTEIN
Source organism: Capnocytophaga ochracea DSM 7271
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-10-17
Authors: Zhang, L., Yang, S., Zhang, Y.
PDB entry 9k2r: Human T cell receptor (TRAV24*01/TRBV27*01) in complex with HLA-C*1202 and IY11 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2024-10-18
Authors: Chikata, T., Kuroki, K., Kuse, N., Kliszczak, A., Paes, W., Tomioka, N., Parker, R., Aflalo, A., Akahoshi, T., Yamashita, R., Sakata, R., Kusaka, H., Watanabe, Y., Nicastri, A., Matsubara, H., Ose, T., Kita, S., Oka, S., Gatanaga, H., Lin, Z., Ternette, N., Borrow, P., Maenaka, K., Takiguchi, M.
PDB entry 9k2s: Killer cell immunoglobulin-like receptor 2DL2 in complex with HLA-C*1202 and IY10 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-10-18
Authors: Chikata, T., Kuroki, K., Kuse, N., Kliszczak, A., Paes, W., Tomioka, N., Parker, R., Aflalo, A., Akahoshi, T., Yamashita, R., Sakata, R., Kusaka, H., Watanabe, Y., Nicastri, A., Matsubara, H., Ose, T., Kita, S., Oka, S., Gatanaga, H., Lin, Z., Ternette, N., Borrow, P., Maenaka, K., Takiguchi, M.
PDB entry 9k2t: Crystal structure of HLA-C*1202 in complex with IY10 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-18
Authors: Chikata, T., Kuroki, K., Kuse, N., Kliszczak, A., Paes, W., Tomioka, N., Parker, R., Aflalo, A., Akahoshi, T., Yamashita, R., Sakata, R., Kusaka, H., Watanabe, Y., Nicastri, A., Matsubara, H., Ose, T., Kita, S., Oka, S., Gatanaga, H., Lin, Z., Ternette, N., Borrow, P., Maenaka, K., Takiguchi, M.
PDB entry 9k2u: Crystal structure of HLA-C*1202 in complex with IY11V9A peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-10-18
Authors: Chikata, T., Kuroki, K., Kuse, N., Kliszczak, A., Paes, W., Tomioka, N., Parker, R., Aflalo, A., Akahoshi, T., Yamashita, R., Sakata, R., Kusaka, H., Watanabe, Y., Nicastri, A., Matsubara, H., Ose, T., Kita, S., Oka, S., Gatanaga, H., Lin, Z., Ternette, N., Borrow, P., Maenaka, K., Takiguchi, M.
PDB entry 9k2v: Cyanophage A4 pre-ejectosome
Classification: VIRAL PROTEIN
Source organism: Anabaena phage A-4L
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-10-18
Authors: Hou, P., Li, Q., Zhou, C.Z.
PDB entry 9k2w: Cryo-EM structure of USP7:DNMT1 complex; closed conformation
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2024-10-18
Authors: Nakamura, N., Arita, K.
PDB entry 9k2x: Cryo-EM structure of USP7:DNMT1 complex; open conformation
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2024-10-18
Authors: Nakamura, N., Arita, K.
PDB entry 9k2y: Human IgG1 Fc fragments, mutant (2CT1.1)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2024-10-18
Authors: Kim, J.-S., Kim, J.-W.
PDB entry 9k2z: Cryo-EM structure of the HfmIscB-omega RNA-target DNA complex
Classification: RNA BINDING PROTEIN
Source organism: metagenome; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-10-18
Authors: Nagahata, N., Yamada, S., Yamashita, K., Nishimasu, H.
PDB entry 9k30: Cryo-EM structure of the TbaIscB-omega RNA-target DNA complex
Classification: RNA BINDING PROTEIN
Source organism: Tissierellia bacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-10-18
Authors: Nagahata, N., Yamada, S., Yamashita, K., Nishimasu, H.
PDB entry 9k31: Cryo-EM structure of the YnpsCas9-guide RNA-target DNA complex
Classification: RNA BINDING PROTEIN
Source organism: metagenome; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.38 Å
Deposited: 2024-10-18
Authors: Nagahata, N., Yamada, S., Yamashita, K., Nishimasu, H.
PDB entry 9k32: Cryo-EM structure of the NbaCas9-guide RNA-target DNA complex
Classification: RNA BINDING PROTEIN
Source organism: Nitrospirota bacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-10-18
Authors: Nagahata, N., Yamada, S., Yamashita, K., Nishimasu, H.
PDB entry 9k34: Human IgG1 Fc fragments, mutant (2CT1.9)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-10-18
Authors: Kim, J.-S., Kim, J.-W.
PDB entry 9k35: Crystal structure of a (R)-selective transaminase (RTA) from Sphingopyxis sp.
Classification: TRANSFERASE
Source organism: Sphingopyxis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-10-18
Authors: Qin, F.Y., Lee, K.M., Wong, K.B., Lee, K.H.
PDB entry 9k36: Human RNA Polymerase III de novo transcribing complex 12 (TC12)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-18
Authors: Wang, Q., Ren, Y., Jin, Q., Chen, X., Xu, Y.
PDB entry 9k38: Human RNA Polymerase III de novo transcribing complex 6 (TC6)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-10-18
Authors: Wang, Q., Ren, Y., Jin, Q., Chen, X., Xu, Y.
PDB entry 9k39: Human RNA Polymerase III de novo transcribing complex 8 (TC8)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-10-18
Authors: Wang, Q., Ren, Y., Jin, Q., Chen, X., Xu, Y.
PDB entry 9k3a: Cyanophage A4 pre-ejectosome with C1 symmetry
Classification: VIRAL PROTEIN
Source organism: Anabaena phage A-4L
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-10-18
Authors: Hou, P., Li, Q., Zhou, C.Z.
PDB entry 9k3b: Human RNA Polymerase III de novo transcribing complex 10 overall (TC10-overall)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2024-10-18
Authors: Wang, Q., Ren, Y., Jin, Q., Chen, X., Xu, Y.
PDB entry 9k3c: Crystal Structure of CapA2 from Alistipes finegoldii in complex with PLP cofactor
Classification: BIOSYNTHETIC PROTEIN
Source organism: Alistipes finegoldii DSM 17242
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2024-10-18
Authors: Yang, S., Zhang, Y.
PDB entry 9k3e: DddB(BadTF3) dsDNA deaminase
Classification: HYDROLASE
Source organism: Taylorella equigenitalis (strain MCE9)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-10-18
Authors: Dong, W.Y., Xiaoliang, S.X.
PDB entry 9k3f: Cryo-EM structure of the unliganded human melanocortin receptor 3 (MC3R)-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2024-10-18
Authors: Feng, W.B., Zhou, Q.T., Zheng, C., Yang, D.H., Wang, M.W.
PDB entry 9k3g: Crystal structure of Sortase A from Streptococcus pyogenes in complex with T10
Classification: HYDROLASE
Source organism: Streptococcus pyogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2024-10-18
Authors: Yang, C.G., Gan, J.
PDB entry 9k3h: Cryo-EM structure of the unliganded human melanocortin receptor 5 (MC5R)-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2024-10-18
Authors: Feng, W.B., Zhou, Q.T., Zheng, C., Yang, D.H., Wang, M.W.
PDB entry 9k3k: Cryo-EM structure of the unliganded human melanocortin receptor 4 (MC4R)-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2024-10-19
Authors: Feng, W.B., Zhou, Q.T., Zheng, C., Yang, D.H., Wang, M.W.
PDB entry 9k3l: Cryo-EM structure of the unliganded human melanocortin receptor 2 (MC2R)-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2024-10-19
Authors: Feng, W.B., Zhou, Q.T., Zheng, C., Yang, D.H., Wang, M.W.
PDB entry 9k3m: The structure of Microviridae PJNS001
Classification: VIRUS
Source organism: Microviridae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-10-19
Authors: Hu, W.L., Chen, Y.B., Wei, Y.M., Gao, Y.
PDB entry 9k3n: The structure of Salmonella phage PJNS002
Classification: VIRUS
Source organism: Salmonella phage PJNS002
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-10-19
Authors: Hu, W.L., Chen, Y.B., Wei, Y.M., Gao, Y.
PDB entry 9k3o: Crystal structure of CapA2 from Alistipes finegoldii in complex with OPS-PLP external aldimine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Alistipes finegoldii DSM 17242
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2024-10-19
Authors: Yang, S., Zhang, Y.
PDB entry 9k3p: Cryo-EM structure of the unliganded human melanocortin receptor 1 (MC1R)-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-10-19
Authors: Feng, W.B., Zhou, Q.T., Zheng, C., Yang, D.H., Wang, M.W.
PDB entry 9k3q: Cryo-EM structure of the Rhodospirillum rubrum RC-LH1 complex
Classification: PHOTOSYNTHESIS
Source organism: Rhodospirillum rubrum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-10-19
Authors: Liu, Z.K., Wang, P., Liu, L.N.
PDB entry 9k3s: Cryo-EM structure of E coli pstSCAB in the catalytic intermediate state
Classification: METAL TRANSPORT
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-10-20
Authors: Chen, Q.F., Xiao, H.
PDB entry 9k3t: Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-10-20
Authors: Katsura, K., Hisano, T., Matsumoto, T., Shirouzu, M.
PDB entry 9k3u: Human RNA Polymerase III de novo transcribing complex 5 (TC5)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-10-20
Authors: Wang, Q., Ren, Y., Jin, Q., Chen, X., Xu, Y.
PDB entry 9k3v: Human RNA Polymerase III de novo transcribing complex 4 (TC4)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-10-20
Authors: Wang, Q., Ren, Y., Jin, Q., Chen, X., Xu, Y.
PDB entry 9k3w: Crystal structure of putative transcription regulator (dr_2454) from Deinococcus radiodurans
Classification: UNKNOWN FUNCTION
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-10-20
Authors: Khakerwala, Z., Kumar, A., Makde, R.D.
PDB entry 9k3x: Cryo-EM structure of E coli pstSCAB in the pretranslocation state
Classification: METAL TRANSPORT
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-20
Authors: Chen, Q.F., Xiao, H.
PDB entry 9k3y: Cryo-EM structure of E coli pstSCAB in the resting state
Classification: METAL TRANSPORT
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-10-20
Authors: Chen, Q.F., Xiao, H.
PDB entry 9k3z: Cryo-EM structure of Arabidopsis thaliana H2A.Z-nucleosome with Arabidopsis native 147bp DNA 15.2.2 (C2 symmetry)
Classification: NUCLEAR PROTEIN/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2024-10-21
Authors: Wang, Y., Dong, A.
PDB entry 9k40: Cryo-EM structure of Arabidopsis thaliana H2A-nucleosome with Arabidopsis native 147bp DNA 15.2.2 (C2 symmetry)
Classification: NUCLEAR PROTEIN/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-10-21
Authors: Wang, Y., Dong, A.
PDB entry 9k41: Cryo-EM structure of Arabidopsis thaliana H2A.W-nucleosome with Arabidopsis native 147bp DNA 15.2.2 (C2 symmetry)
Classification: NUCLEAR PROTEIN/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2024-10-21
Authors: Wang, Y., Dong, A.
PDB entry 9k42: Cryo-EM structure of Arabidopsis thaliana H2A-nucleosome with 147bp Widom 601 DNA (C2 symmetry)
Classification: NUCLEAR PROTEIN/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-10-21
Authors: Wang, Y., Dong, A.
PDB entry 9k43: Cryo-EM structure of Arabidopsis thaliana H2A.Z-nucleosome with 147bp Widom 601 DNA (C2 symmetry)
Classification: NUCLEAR PROTEIN/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2024-10-21
Authors: Wang, Y., Dong, A.
PDB entry 9k44: Cryo-EM structure of Arabidopsis thaliana H2A-H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2 (C2 symmetry)
Classification: NUCLEAR PROTEIN/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2024-10-21
Authors: Wang, Y., Dong, A.
PDB entry 9k45: Cryo-EM structure of Arabidopsis thaliana H2A.Z-H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2 (C2 symmetry)
Classification: NUCLEAR PROTEIN/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2024-10-21
Authors: Wang, Y., Dong, A.
PDB entry 9k46: Cryo-EM structure of Arabidopsis thaliana H2A.W-H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2 (C2 symmetry)
Classification: NUCLEAR PROTEIN/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-10-21
Authors: Wang, Y., Dong, A.
PDB entry 9k47: Cryo-EM structure of glomalin (a group I chaperonin) from Rhizophagus irregularis BGC BJ09
Classification: CHAPERONE
Source organism: Rhizophagus irregularis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-10-21
Authors: Wang, Y., Jia, M., Tan, W.
PDB entry 9k48: Bacetrial Cocaine Esterase with mutations T172R/G173Q/V116K/S117A/A51K
Classification: HYDROLASE
Source organism: Rhodococcus sp. (strain MB1 Bresler)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.249 Å
Deposited: 2024-10-21
Authors: Zhang, Y., Tong, J.S.
PDB entry 9k49: Cryo-EM structure of inner membrane TolQRA complex in CYMAL-6-Neopentyl Glycol detergent micelles
Classification: PROTON TRANSPORT
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-10-21
Authors: Yeow, J., Chng, S.S.
PDB entry 9k4a: Cryo-EM structure of depolymerase S2-4 from Klebsiella phage K64-1
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella phage K64-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.24 Å
Deposited: 2024-10-21
Authors: Zhao, R., Du, T., Ren, Z., Gu, J., Ru, H.
PDB entry 9k4b: Cryo-EM structure of depolymerase S2-4 from Klebsiella phage K64-1
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella phage K64-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.18 Å
Deposited: 2024-10-21
Authors: Zhao, R., Du, T., Ren, Z., Gu, J., Ru, H.
PDB entry 9k4c: SuperFi Cas9 - 22nt sgRNA - DNA ternary complex
Classification: IMMUNE SYSTEM/DNA/RNA
Source organism: Streptococcus pyogenes; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2024-10-21
Authors: Zheng, R., Ma, L.J.
PDB entry 9k4d: SuperFi Cas9 - 20nt sgRNA - DNA ternary complex
Classification: IMMUNE SYSTEM/DNA/RNA
Source organism: Streptococcus pyogenes; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2024-10-21
Authors: Zheng, R., Ma, L.J.
PDB entry 9k4e: SuperFi Cas9 - mismatch 22nt sgRNA - DNA ternary complex class1
Classification: IMMUNE SYSTEM/DNA/RNA
Source organism: Streptococcus pyogenes; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-10-21
Authors: Zheng, R., Ma, L.J.
PDB entry 9k4f: SuperFi Cas9 - mismatch 22nt sgRNA - DNA ternary complex class2
Classification: IMMUNE SYSTEM/DNA/RNA
Source organism: Streptococcus pyogenes; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2024-10-21
Authors: Zheng, R., Ma, L.J.
PDB entry 9k4g: 5-fold vertex of SH-Ab15497
Classification: VIRAL PROTEIN
Source organism: Acinetobacter phage SH-Ab 15497
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-21
Authors: Lin, J., Zhao, S.W.
PDB entry 9k4h: SuperFi Cas9 - mismatch 22nt sgRNA - DNA ternary complex class3
Classification: IMMUNE SYSTEM/DNA/RNA
Source organism: Streptococcus pyogenes; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-10-21
Authors: Zheng, R., Ma, L.J.
PDB entry 9k4i: Cryo-EM structure of the human TRPC1/C5 heteromer
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12); Escherichia coli K-12; Homo sapiens; Human betaherpesvirus 5; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-10-21
Authors: Chen, Y.X., Cheng, X.Y., Zhang, J.
PDB entry 9k4j: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EA1.0
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4k: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EA1.1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4l: Structure of substrate-engaged 26S proteasome RP-CP subcomplex in state EA1.2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4m: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EA2.1
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4o: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EA2.2
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4p: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EA2.3
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4q: Crystal structure of designed zinc-induced homodimer C2-Zn1-HEHE-2
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-10-21
Authors: Qu, Y.N., Cao, L.X.
PDB entry 9k4r: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EB.1
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4s: Structure of substrate-engaged 26S proteasome RP-CP subcomplex in state EB.2
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4t: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EB.3
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4u: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EC1
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4v: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state EC2
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4w: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED0.1
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4x: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED0.2
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4y: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED0.3
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k4z: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED1.1
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k50: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED1.2
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k51: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED1.3
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k53: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED2.1
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k54: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED2.2
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k55: Structure of substrate-engaged human 26S proteasome RP-CP subcomplex in state ED2.3
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k56: Structure of substrate-engaged single-cap human proteasome in state EA1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k57: Structure of substrate-engaged single-cap human proteasome in state EA2
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k58: Structure of substrate-engaged single-cap human proteasome in state EB
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k59: Structure of substrate-engaged single-cap human proteasome in state EC1
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k5a: Structure of substrate-engaged single-cap human proteasome in state EC2
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k5b: Structure of substrate-engaged single-cap human proteasome in state ED0
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k5c: Structure of substrate-engaged single-cap human proteasome in state ED1
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k5d: Structure of substrate-engaged single-cap human proteasome in state ED2
Classification: HYDROLASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k5e: Structure of substrate-engaged double-cap human proteasome in state EA1-EA1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-10-21
Authors: Wu, Z., Chen, E., Mao, Y.
PDB entry 9k5h: Crystal structure of designed zinc-induced homodimer C2-Zn2-HEHE-2
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-10-21
Authors: Qu, Y.N., Cao, L.X.
PDB entry 9k5p: Crystal structure of designed zinc-induced homotrimer C3-Zn2-HEHE-19
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-10-21
Authors: Qu, Y.N., Cao, L.X.
PDB entry 9k6g: Structure of human LINE-1 ORF2p with endogenous dsDNA and RNA/cDNA hybrid
Classification: GENE REGULATION
Source organism: Homo sapiens; Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-10-22
Authors: Jin, W., Yu, C., Xu, R.M.
PDB entry 9k6h: Structure of human LINE-1 ORF2p with endogenous DNA and RNA/cDNA hybrid bound to dNTP and Mn2+
Classification: GENE REGULATION
Source organism: Homo sapiens; Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-10-22
Authors: Jin, W., Yu, C., Xu, R.M.
PDB entry 9k6i: Structure of full-length human LINE-1 ORF2p with endogenous DNA and RNA/cDNA hybrid
Classification: GENE REGULATION
Source organism: Homo sapiens; Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-10-22
Authors: Jin, W., Yu, C., Xu, R.M.
PDB entry 9k6j: Crystal structure of SARS-CoV-2 WT RBD bound with P5-1C8 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2024-10-22
Authors: Lv, N.N., Yang, R.Y.
PDB entry 9k6k: monkeypox thymidine kinase
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.826 Å
Deposited: 2024-10-22
Authors: Zhang, T., Cui, W., Wang, W.
PDB entry 9k6l: Cryo-EM structure of GPCR16-Gi2 complex
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Streptococcus pneumoniae; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2024-10-22
Authors: Wang, X., Zhou, C., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 9k6m: Crystal structure of the Dictyostelium discoideum mitochondrial calcium uptake protein (DdMICU)
Classification: METAL BINDING PROTEIN
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.502 Å
Deposited: 2024-10-22
Authors: Jin, M., Yang, J., Park, J., Kim, H., Eom, S.H.
PDB entry 9k6n: Pentraxin Domain of PTX3 Tetramer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-10-22
Authors: Guo, H.H., Zhang, H.W.
PDB entry 9k6o: Crystal structure of designed zinc-induced homopentamer C5-Zn1-HEHE-1
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-10-22
Authors: Qu, Y.N., Cao, L.X.
PDB entry 9k6p: Cryo-EM Structure of hAGO2D669A-siRNA-target (12-nt)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-10-22
Authors: Li, Z.Z., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9k6q: ""Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, sesqui-lobed)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-10-22
Authors: Li, Z.Z., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9k6r: Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, uni-lobed)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-10-22
Authors: Li, Z.Z., Xu, Q.K., Wu, J.P., Shen, E.Z.
PDB entry 9k6s: Cryo-EM Structure of hAGO2D669A-siRNA-target (19-nt)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-10-22
Authors: Li, Z.Z., Xu, Q.K., Wu, J.P., Shen, E.Z.