LiteFold/PDB huggingface dataset:
PDB entry 4nd3: Crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with substrate (l-lactic acid) and cofactor (b-nicotinamide adenine dinucleotide)
Classification: OXIDOREDUCTASE
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-10-25
Authors: Chattopadhyay, D., Cook, W.J.
PDB entry 4nd4: Crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with substrate (pyruvic acid) and cofactor (b-nicotinamide adenine dinucleotide)
Classification: OXIDOREDUCTASE
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-10-25
Authors: Chattopadhyay, D., Cook, W.J.
PDB entry 4nd5: Crystal structure of the lactate dehydrogenase from cryptosporidium parvum
Classification: OXIDOREDUCTASE
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-10-25
Authors: Chattopadhyay, D., Cook, W.J.
PDB entry 4nd6: Crystal structure of apo 3-nitro-tyrosine tRNA synthetase (5B) in the open form
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-10-25
Authors: Cooley, R.B., Driggers, C.M., Karplus, P.A., Mehl, R.A.
PDB entry 4nd7: Crystal structure of apo 3-nitro-tyrosine tRNA synthetase (5B) in the closed form
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-10-25
Authors: Cooley, R.B., Driggers, C.M., Karplus, P.A., Mehl, R.A.
PDB entry 4nd8: Av Nitrogenase MoFe Protein High pH Form
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-10-25
Authors: Yang, K.-Y., Haynes, C.A., Spatzal, T., Rees, D.C., Howard, J.B.
PDB entry 4nd9: The putative substrate binding domain of ABC-type transporter from Agrobacterium tumefaciens in open conformation
Classification: TRANSPORT PROTEIN
Source organism: Agrobacterium fabrum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-10-25
Authors: Nicholls, R., Tkaczuk, K.L., Kagan, O., Chruszcz, M., Domagalski, M.J., Savchenko, A., Joachimiak, A., Murshudov, G., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 4nda: Crystal structure of 3-nitro-tyrosine tRNA synthetase (5B) bound to 3-nitro-tyrosine
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-10-25
Authors: Cooley, R.B., Driggers, C.M., Karplus, P.A., Mehl, R.A.
PDB entry 4ndb: X-ray structure of a mutant (T61D) of calexcitin - a neuronal calcium-signalling protein
Classification: SIGNALING PROTEIN
Source organism: Doryteuthis pealeii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-10-25
Authors: Erskine, P.T., Fokas, A., Muriithi, C., Razzall, E., Bowyer, A., Findlow, I.S., Werner, J.M., Wallace, B.A., Wood, S.P., Cooper, J.B.
PDB entry 4ndc: X-ray structure of a mutant (T188D) of calexcitin - a neuronal calcium-signalling protein
Classification: SIGNALING PROTEIN
Source organism: Doryteuthis pealeii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-10-25
Authors: Erskine, P.T., Fokas, A., Muriithi, C., Razzall, E., Bowyer, A., Findlow, I.S., Werner, J.M., Wallace, B.A., Wood, S.P., Cooper, J.B.
PDB entry 4ndd: X-ray structure of a double mutant of calexcitin - a neuronal calcium-signalling protein
Classification: SIGNALING PROTEIN
Source organism: Doryteuthis pealeii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-10-25
Authors: Erskine, P.T., Fokas, A., Muriithi, C., Razzall, E., Bowyer, A., Findlow, I.S., Werner, J.M., Wallace, B.A., Wood, S.P., Cooper, J.B.
PDB entry 4ndf: Human Aprataxin (Aptx) bound to RNA-DNA, AMP, and Zn - product complex
Classification: DNA BINDING PROTEIN/RNA/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.944 Å
Deposited: 2013-10-26
Authors: Schellenberg, M.J., Tumbale, P.S., Williams, R.S.
PDB entry 4ndg: Human Aprataxin (Aptx) bound to RNA-DNA and Zn - adenosine vanadate transition state mimic complex
Classification: DNA BINDING PROTEIN/RNA/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.541 Å
Deposited: 2013-10-26
Authors: Schellenberg, M.J., Tumbale, P.S., Williams, R.S.
PDB entry 4ndh: Human Aprataxin (Aptx) bound to DNA, AMP, and Zn - product complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.848 Å
Deposited: 2013-10-26
Authors: Schellenberg, M.J., Tumbale, P.S., Williams, R.S.
PDB entry 4ndi: Human Aprataxin (Aptx) AOA1 variant K197Q bound to RNA-DNA, AMP, and Zn - product complex
Classification: DNA BINDING PROTEIN/RNA/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-10-26
Authors: Schellenberg, M.J., Tumbale, P.S., Williams, R.S.
PDB entry 4ndj: Crystal Structure of a computational designed engrailed homeodomain variant fused with YFP
Classification: fluorescent protein, de novo protein
Source organism: Aequorea victoria; Eimeria acervulina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-10-26
Authors: Mou, Y., Mayo, S.L.
PDB entry 4ndk: Crystal structure of a computational designed engrailed homeodomain variant fused with YFP
Classification: fluorescent protein, de novo protein
Source organism: Aequorea victoria; Eimeria acervulina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-10-26
Authors: Mou, Y., Mayo, S.L.
PDB entry 4ndl: Computational design and experimental verification of a symmetric homodimer
Classification: DE NOVO PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2013-10-26
Authors: Mou, Y., Huang, P.S., Hsu, F.C., Huang, S.J., Mayo, S.L.
PDB entry 4ndm: Structure of the AB18.1 TCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.0065 Å
Deposited: 2013-10-27
Authors: Luoma, A.M., Adams, E.J.
PDB entry 4ndn: Structural insights of MAT enzymes: MATa2b complexed with SAM and PPNP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2013-10-27
Authors: Murray, B., Antonyuk, S.V., Marina, A., Lu, S.C., Mato, J.M., Hasnain, S.S., Rojas, A.L.
PDB entry 4ndo: Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-10-27
Authors: Poppe, J., Warkentin, E., Demmer, U., Ermler, U.
PDB entry 4ndp: Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-10-27
Authors: Poppe, J., Warkentin, E., Demmer, U., Ermler, U.
PDB entry 4ndq: Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.751 Å
Deposited: 2013-10-27
Authors: Poppe, J., Warkentin, E., Demmer, U., Ermler, U.
PDB entry 4ndr: Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-10-27
Authors: Poppe, J., Warkentin, E., Demmer, U., Ermler, U.
PDB entry 4nds: Crystal structure of L. decastes alpha-galactosyl-binding lectin
Classification: SUGAR BINDING PROTEIN
Source organism: Lyophyllum decastes
Experimental method: X-RAY DIFFRACTION
Resolution: 0.997 Å
Deposited: 2013-10-27
Authors: Van Eerde, A., Grahn, E., Krengel, U.
PDB entry 4ndt: Crystal structure of L. decastes alpha-galactosyl-binding lectin, orthorhombic crystal form
Classification: SUGAR BINDING PROTEIN
Source organism: Lyophyllum decastes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2013-10-27
Authors: Van Eerde, A., Grahn, E., Krengel, U.
PDB entry 4ndu: Crystal structure of L. decastes alpha-galactosyl-binding lectin in complex with alpha-methylgalactoside
Classification: SUGAR BINDING PROTEIN
Source organism: Lyophyllum decastes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.301 Å
Deposited: 2013-10-27
Authors: Van Eerde, A., Grahn, E., Krengel, U.
PDB entry 4ndv: Crystal structure of L. decastes alpha-galactosyl-binding lectin in complex with globotriose
Classification: SUGAR BINDING PROTEIN
Source organism: Lyophyllum decastes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-10-27
Authors: Van Eerde, A., Grahn, E., Krengel, U.
PDB entry 4ndw: Crystal STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ESX-1 SECRETED PROTEIN REGULATOR (EspR)
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2013-10-28
Authors: Gangwar, S.P., Meena, S.R., Saxena, A.K.
PDB entry 4ndx: Crystal structure of Staphylococcal nuclease variant Delta+PHS I92N at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.496 Å
Deposited: 2013-10-28
Authors: Caro, J.A., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4ndy: Human MHF1-MHF2 DNA complex
Classification: DNA Binding Protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 6.999 Å
Deposited: 2013-10-28
Authors: Zhao, Q., Saro, D., Sachpatzidis, A., Sung, P., Xiong, Y.
PDB entry 4ndz: Structure of Maltose Binding Protein fusion to 2-O-Sulfotransferase with bound heptasaccharide and PAP
Classification: TRANSPORT PROTEIN/TRANSFERASE
Source organism: Escherichia coli; Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2013-10-28
Authors: Liu, C., Sheng, J., Krahn, J.M., Perera, L., Xu, Y., Hsieh, P., Liu, J., Pedersen, L.C.
PDB entry 4ne0: Crystal structure of non-heme iron oxygenase OrfP D157A mutant in complex with (3S)-hydroxy-L-Arg
Classification: HYDROLASE
Source organism: Streptomyces lavendulae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2013-10-28
Authors: Chang, C.Y., Liu, Y.C., Lyu, S.Y., Wu, C.C., Li, T.L.
PDB entry 4ne1: Human MHF1 MHF2 DNA complexes
Classification: DNA binding protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 6.499 Å
Deposited: 2013-10-28
Authors: Zhao, Q., Saro, D., Sachpatzidis, A., Sung, P., Xiong, Y.
PDB entry 4ne2: Pantothenamide-bound Pantothenate Kinase from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-10-28
Authors: Hughes, S.J., Antoshchenko, T., Kim, K.P., Smil, D., Park, H.W.
PDB entry 4ne3: Human MHF1-MHF2 complex
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8007 Å
Deposited: 2013-10-28
Authors: Zhao, Q., Saro, D., Sachpatzidis, A., Sung, P., Xiong, Y.
PDB entry 4ne4: Crystal structure of ABC transporter substrate binding protein ProX from Agrobacterium tumefaciens cocrystalized with BTB
Classification: TRANSPORT PROTEIN
Source organism: Agrobacterium fabrum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2013-10-28
Authors: Tkaczuk, K.L., Nicholls, R., Kagan, O., Chruszcz, M., Domagalski, M.J., Savchenko, A., Joachimiak, A., Murshudov, G., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 4ne5: Human MHF1-MHF2 complex
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-10-28
Authors: Zhao, Q., Saro, D., Sachpatzidis, A., Sung, P., Xiong, Y.
PDB entry 4ne6: Human MHF1-MHF2 complex
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1001 Å
Deposited: 2013-10-28
Authors: Zhao, Q., Saro, D., Sachpatzidis, A., Sung, P., Xiong, Y.
PDB entry 4ne7: Crystal Structure of engineered Kumamolisin-As from Alicyclobacillus sendaiensis, Northeast Structural Genomics Consortium (NESG) Target OR367
Classification: HYDROLASE
Source organism: Alicyclobacillus sendaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.497 Å
Deposited: 2013-10-28
Authors: Guan, R., Pultz, I.S., Siegel, J.B., Seetharaman, J., Kornhaber, G., Maglaqui, M., Mao, L., Xiao, R., Everett, J.K., Baker, D., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)
PDB entry 4ne9: PCSK9 in complex with LDLR peptide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-10-28
Authors: Liu, S.
PDB entry 4nea: 1.90 Angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betB) from Staphylococcus aureus in complex with NAD+ and BME-free Cys289
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-10-28
Authors: Halavaty, A.S., Minasov, G., Winsor, J., Dubrovska, I., Shuvalova, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4neb: Previously de-ionized HEW lysozyme batch crystallized in 0.5 M MnCl2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2013-10-29
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4nec: Conversion of a Disulfide Bond into a Thioacetal Group during Echinomycin Biosynthesis
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Streptomyces lasaliensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-10-29
Authors: Hotta, K., Keegan, R.M., Ranganathan, S., Fang, M., Bibby, J., Winn, M.D., Sato, M., Lian, M., Watanabe, K., Rigden, D.J., Kim, C.-Y.
PDB entry 4ned: Crystal STRUCTURE OF C-LOBE OF BOVINE LACTOFERRIN COMPLEXED WITH FENOPROFEN AT 2.1 ANGSTROM RESOLUTION
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-10-29
Authors: Gautam, L., Dube, D., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4nee: crystal structure of AP-2 alpha/simga2 complex bound to HIV-1 Nef
Classification: VIRAL PROTEIN/PROTEIN TRANSPORT
Source organism: Human immunodeficiency virus 1; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8841 Å
Deposited: 2013-10-29
Authors: Hurley, J.H., Bonifacino, J.S., Ren, X., Park, S.Y.
PDB entry 4nef: X-ray structure of human Aquaporin 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2013-10-29
Authors: Frick, A., Eriksson, U., Mattia, F.D., Oberg, F., Hedfalk, K., Neutze, R., Grip, W.D., Deen, P.M.T., Tornroth-horsefield, S.
PDB entry 4neg: The crystal structure of tryptophan synthase subunit beta from Bacillus anthracis str. 'Ames Ancestor'
Classification: LYASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.201 Å
Deposited: 2013-10-29
Authors: Tan, K., Zhang, R., Zhou, M., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4neh: An internal ligand-bound, metastable state of a leukocyte integrin, aXb2
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7505 Å
Deposited: 2013-10-29
Authors: Sen, M., Yuki, K., Springer, T.A.
PDB entry 4nei: Alg17c PL17 Family Alginate Lyase
Classification: LYASE
Source organism: Saccharophagus degradans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-10-29
Authors: Park, D.S., Nair, S.K.
PDB entry 4nej: Small molecular fragment bound to crystal contact interface of Interleukin-2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.919 Å
Deposited: 2013-10-29
Authors: Brenke, R., Jehle, S., Vajda, S., Allen, K.N., Kozakov, D.
PDB entry 4nek: Putative enoyl-CoA hydratase/carnithine racemase from Magnetospirillum magneticum AMB-1
Classification: ISOMERASE
Source organism: Magnetospirillum magneticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-10-29
Authors: Tkaczuk, K.L., Cooper, D.R., Geffken, K., Chapman, H.C., Stead, M., Hillerich, B., Ahmed, M., Bonanno, J.B., Seidel, R., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4nel: Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with N,N-dimethylmethanamine
Classification: TRANSCRIPTION REGULATOR
Source organism: Saccharomonospora viridis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-10-29
Authors: Halavaty, A.S., Filippova, E.V., Minasov, G., Kiryukhina, O., Shuvalova, L., Endres, M., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)
PDB entry 4nem: Small molecular fragment bound to crystal contact interface of Interleukin-2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.934 Å
Deposited: 2013-10-29
Authors: Jehle, S., Brenke, R., Vajda, S., Allen, K.N., Kozakov, D.
PDB entry 4nen: An internal ligand-bound, metastable state of a leukocyte integrin, aXb2
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9012 Å
Deposited: 2013-10-29
Authors: Sen, M., Yuki, K., Springer, T.A.
PDB entry 4neo: Structure of BlmI, a type-II acyl-carrier-protein from Streptomyces verticillus involved in bleomycin biosynthesis
Classification: LIGASE
Source organism: Streptomyces verticillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-10-29
Authors: Cuff, M.E., Bigelow, L., Bearden, J., Babnigg, G., Bruno, C.J.P., Bingman, C.A., Yennamalli, R., Lohman, J., Ma, M., Shen, B., Phillips Jr., G.N., Joachimiak, A., Enzyme Discovery for Natural Product Biosynthesis (NatPro), Midwest Center for Structural Genomics (MCSG)
PDB entry 4neq: The structure of UDP-GlcNAc 2-epimerase from Methanocaldococcus jannaschii
Classification: ISOMERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2013-10-29
Authors: Chen, S.C., Yang, C.S., Huang, C.H., Chen, Y.
PDB entry 4ner: Multicopper Oxidase CueO (data1)
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-10-30
Authors: Komori, H., Kataoka, K., Sakurai, T., Higuchi, Y.
PDB entry 4nes: Crystal structure of Methanocaldococcus jannaschii UDP-GlcNAc 2-epimerase in complex with UDP-GlcNAc and UDP
Classification: ISOMERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2013-10-30
Authors: Chen, S.C., Yang, C.S., Huang, C.H., Chen, Y.
PDB entry 4net: Crystal structure of ADC-1 beta-lactamase
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2013-10-30
Authors: Bhattacharya, M., Toth, M., Antunes, N.T., Smith, C.A., Vakulenko, S.B.
PDB entry 4neu: X-ray structure of Receptor Interacting Protein 1 (RIP1)kinase domain with a 1-aminoisoquinoline inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2013-10-30
Authors: Nolte, R.T., Ward, P., kahler, K.M., Campobasso, N.
PDB entry 4nev: Crystal structure of Trypanothione Reductase from Trypanosoma brucei in complex with inhibitor EP127 (5-{5-[1-(PYRROLIDIN-1-YL)CYCLOHEXYL]-1,3-THIAZOL-2-YL}-1H-INDOLE)
Classification: Oxidoreductase/Oxidoreductase inhibitor
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-10-30
Authors: Persch, E., Bryson, S., Pai, E.F., Krauth-Siegel, R.L., Diederich, F.
PDB entry 4new: Crystal structure of Trypanothione Reductase from Trypanosoma cruzi in complex with inhibitor EP127 (5-{5-[1-(PYRROLIDIN-1-YL)CYCLOHEXYL]-1,3-THIAZOL-2-YL}-1H-INDOLE)
Classification: Oxidoreductase/Oxidoreductase inhibitor
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-10-30
Authors: Persch, E., Bryson, S., Pai, E.F., Krauth-Siegel, R.L., Diederich, F.
PDB entry 4nex: Structure of the N-acetyltransferase domain of X. fastidiosa NAGS/K
Classification: TRANSFERASE
Source organism: Xylella fastidiosa Temecula1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6955 Å
Deposited: 2013-10-30
Authors: Zhao, G., Jin, Z., Allewell, N.M., Tuchman, M., Shi, D.
PDB entry 4ney: Crystal Structure of an engineered protein with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR277
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.323 Å
Deposited: 2013-10-30
Authors: Guan, R., Lin, Y.-R., Koga, N., Koga, R., Castellanos, J., Seetharaman, J., Maglaqui, M., Sahdev, S., Mao, L., Xiao, R., Everett, J.K., Baker, D., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)
PDB entry 4nez: Crystal Structure of an engineered protein with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR276
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.395 Å
Deposited: 2013-10-30
Authors: Guan, R., Lin, Y.-R., Koga, N., Koga, R., Castellanos, J., Seetharaman, J., Maglaqui, M., Sahdev, S., Mao, L., Xiao, R., Everett, J.K., Baker, D., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)
PDB entry 4nf0: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM PSEUDOMONAS AERUGINOSA PAO1 (PA4616), TARGET EFI-510182, WITH BOUND L-Malate
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-10-30
Authors: Vetting, M.W., Patskovsky, Y., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4nf1: Structure of N-acetyltransferase domain of X. fastidiosa NAGS/K without his-tag
Classification: TRANSFERASE
Source organism: Xylella fastidiosa Temecula1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3986 Å
Deposited: 2013-10-30
Authors: Zhao, G., Jin, Z., Allewell, N.M., Tuchman, M., Shi, D.
PDB entry 4nf2: Crystal structure of anabolic ornithine carbamoyltransferase from Bacillus anthracis in complex with carbamoyl phosphate and L-norvaline
Classification: TRANSFERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2013-10-30
Authors: Shabalin, I.G., Handing, K., Cymborowski, M.T., Stam, J., Winsor, J., Shuvalova, L., Anderson, W.F., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4nf4: Crystal structure of GluN1/GluN2A ligand-binding domain in complex with DCKA and glutamate
Classification: transport protein, receptor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-10-30
Authors: Annie, J., Tajima, N., Furukawa, H.
PDB entry 4nf5: Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and D-AP5
Classification: transport protein, receptor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.903 Å
Deposited: 2013-10-30
Authors: Jespersen, A., Tajima, N., Furukawa, H.
PDB entry 4nf6: Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and PPDA
Classification: transport protein, receptor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-10-30
Authors: Jespersen, A., Tajima, N., Furukawa, H.
PDB entry 4nf7: Crystal structure of the GH5 family catalytic domain of Endo-1,4-beta-glucanase Cel5C from Butyrivibrio proteoclasticus.
Classification: HYDROLASE
Source organism: Butyrivibrio proteoclasticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.111 Å
Deposited: 2013-10-30
Authors: Lott, J.S., Colbert, D.A.
PDB entry 4nf8: Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and glutamate in PEG2000MME
Classification: transport protein, receptor
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.856 Å
Deposited: 2013-10-30
Authors: Jespersen, A., Tajima, N., Furukawa, H.
PDB entry 4nf9: Structure of the Knl1/Nsl1 complex
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-10-31
Authors: Petrovic, A., Mosalaganti, S., Keller, J., Mattiuzzo, M., Overlack, K., Wohlgemuth, S., Pasqualato, S., Raunser, S., Musacchio, A.
PDB entry 4nfa: Structure of the C-terminal doamin of Knl1
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.497 Å
Deposited: 2013-10-31
Authors: Petrovic, A., Mosalaganti, S., Keller, J., Mattiuzzo, M., Overlack, K., Wohlgemuth, S., Pasqualato, S., Raunser, S., Musacchio, A.
PDB entry 4nfb: Structure of paired immunoglobulin-like type 2 receptor (PILR )
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-10-31
Authors: Lu, Q., Lu, G., Qi, J., Li, Y., Zhang, Y., Wang, H., Fan, Z., Yan, J., Gao, G.
PDB entry 4nfc: Structure of paired immunoglobulin-like type 2 receptor (PILR )
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-10-31
Authors: Lu, Q., Lu, G., Qi, J., Li, Y., Zhang, Y., Wang, H., Fan, Z., Yan, J., Gao, G.F.
PDB entry 4nfd: Structure of PILR L108W mutant in complex with sialic acid
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.708 Å
Deposited: 2013-10-31
Authors: Lu, Q., Lu, G., Qi, J., Li, Y., Zhang, Y., Wang, H., Fan, Z., Yan, J., Gao, G.F.
PDB entry 4nfe: Human kallikrein-related peptidase 2 in complex with benzamidine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-10-31
Authors: Skala, W., Brandstetter, H., Magdolen, V., Goettig, P.
PDB entry 4nff: Human kallikrein-related peptidase 2 in complex with PPACK
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-10-31
Authors: Skala, W., Brandstetter, H., Magdolen, V., Goettig, P.
PDB entry 4nfg: K13R mutant of horse cytochrome c and yeast cytochrome c peroxidase complex
Classification: OXIDOREDUCTASE/ELECTRON TRANSPORT
Source organism: Equus caballus; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2013-10-31
Authors: Meulenbroek, E.M., Bashir, Q., Ubbink, M., Pannu, N.S.
PDB entry 4nfh: V207A Horse Liver Alcohol Dehydrogenase E complexed with NAD and 2,3,4,5,6-pentafluorobenzyl alcohol
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2013-10-31
Authors: Plapp, B.V.
PDB entry 4nfi: Crystal structure of human FPPS in complex with magnesium and JDS05120
Classification: Transferase/Transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-10-31
Authors: Park, J., De Schutter, J.W., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 4nfj: Crystal structure of human FPPS in complex with magnesium, JDS05120, and sulfate
Classification: Transferase/Transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-10-31
Authors: Park, J., De Schutter, J.W., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 4nfk: Crystal structure of human FPPS in complex with nickel, JDS05120, and sulfate
Classification: Transferase/Transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-10-31
Authors: Park, J., De schutter, J.W., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 4nfl: Crystal structure of human mitochondrial 5'(3')-deoxyribonucleotidase in complex with the inhibitor NPB-T
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.375 Å
Deposited: 2013-10-31
Authors: Pachl, P., Rezacova, P., Brynda, J.
PDB entry 4nfm: Human tau tubulin kinase 1 (TTBK1)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2013-10-31
Authors: Sheriff, S.
PDB entry 4nfn: Human tau tubulin kinase 1 (TTBK1) complexed with 3-({5-[(4-amino-4-methylpiperidin-1-yl)methyl]pyrrolo[2,1-f][1,2,4]triazin-4-yl}amino)-5-bromophenol
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2013-10-31
Authors: Sheriff, S.
PDB entry 4nfo: Crystal Structure Analysis of the 16mer GCAGACUUAAGUCUGC
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2013-10-31
Authors: Beal, P.A., Fisher, A.J., Phelps, K.J., Ibarra-Soza, J.M., Zheng, Y.
PDB entry 4nfp: Crystal Structure Analysis of the 16mer GCAGNCUUAAGUCUGC containing 8-aza-7-deaza-7-ethynyl Adenosine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-10-31
Authors: Beal, P.A., Fisher, A.J., Phelps, K.J., Ibarra-Soza, J.M., Zheng, Y.
PDB entry 4nfq: Crystal Structure Analysis of the 16mer GCAGNCUUAAGUCUGC containing 7-triazolyl-8-aza-7-deazaadenosine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-10-31
Authors: Beal, P.A., Fisher, A.J., Phelps, K.J., Ibarra-Soza, J.M., Zheng, Y.
PDB entry 4nfr: Human brain aspartoacylase mutant E285A complex with intermediate analog (N-phosphonomethyl-L-aspartate)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-10-31
Authors: Wijayasinghe, Y.S., Pavlovsky, A.G., Viola, R.E.
PDB entry 4nfs: V203A horse liver alcohol dehydrogenase E complexed with NAD and 2,2,2-trifluoroethanol
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2013-10-31
Authors: Plapp, B.V.
PDB entry 4nft: Crystal structure of human lnkH2B-h2A.Z-Anp32e
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2013-11-01
Authors: Shan, S., Pan, L., Mao, Z., Wang, W., Sun, J., Dong, Q., Liang, X., Ding, X., Chen, S., Dai, L., Zhang, Z., Zhu, B., Zhou, Z.
PDB entry 4nfu: Structure of the central plant immunity signaling node EDS1 in complex with its interaction partner SAG101
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2013-11-01
Authors: Wagner, S., Stuttmann, J., Rietz, S., Guerois, R., Niefind, K., Parker, J.E.
PDB entry 4nfv: Previously de-ionized HEW lysozyme batch crystallized in 1.1 M MnCl2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2013-11-01
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4nfw: Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-11-01
Authors: Hong, M.K., Kim, J.K., Kang, L.W.
PDB entry 4nfx: Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2013-11-01
Authors: Hong, M.K., Kim, J.K., Kang, L.W.
PDB entry 4nfy: Crystal Structure of 3-phosphoglycerate Dehydrogenase from Entamoeba histolytica
Classification: OXIDOREDUCTASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2013-11-01
Authors: Singh, R.K., Gourinath, S.
PDB entry 4nfz: Crystal structure of polymerase subunit PA N-terminal endonuclease domain from bat-derived influenza virus H17N10
Classification: RNA BINDING PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-11-01
Authors: Tefsen, B., Lu, G., Zhu, Y., Haywood, J., Zhao, L., Deng, T., Qi, J., Gao, G.F.
PDB entry 4ng0: Lar_0958 a cell surface adhesin from lactobacillus reuteri
Classification: CELL ADHESION
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.501 Å
Deposited: 2013-11-01
Authors: Etzold, S., Mackenzie, D.A., Juge, N., Hemmings, A.M.
PDB entry 4ng1: Previously de-ionized HEW lysozyme batch crystallized in 1.9 M CsCl
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2013-11-01
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ng2: Crystal structure of LasR LBD-QslA complex from Pseudomonas aeruginosa
Classification: Transcription Regulator
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.413 Å
Deposited: 2013-11-01
Authors: Fan, H., Wu, D.H., Song, H.
PDB entry 4ng3: Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with 4-Hydroxy-3-methoxy-5-nitrobenzoic acid
Classification: LYASE
Source organism: Sphingomonas paucimobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.751 Å
Deposited: 2013-11-01
Authors: Fedorov, A.A., Fedorov, E.V., Vladimirova, A., Raushel, F.M., Almo, S.C.
PDB entry 4ng4: Structure of phosphoglycerate kinase (CBU_1782) from Coxiella burnetii
Classification: TRANSFERASE
Source organism: Coxiella burnetii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2013-11-01
Authors: Franklin, M.C., Cheung, J., Rudolph, M., Cassidy, M., Gary, E., Burshteyn, F., Love, J.
PDB entry 4ng5: V203A horse liver alcohol dehydrogenase E complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2013-11-01
Authors: Plapp, B.V.
PDB entry 4ng6: The effects of Lysine 200 and Phenylalanine 239 Farnesyl Pyrophosphate Synthase (FPPS) mutations on the catalytic activity, crystal structure and inhibition by nitrogen containing bisphosphonates
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-11-01
Authors: Tsoumpra, M.K., Muniz, J.R.C., Barnett, B.L., Pilka, E., Kwaasi, A.A., Kavanagh, K.L., Evdokimov, A., Walter, R.L., Ebetino, F.H., Oppermann, U., Russell, R.G.G., Dunford, J.E.
PDB entry 4ng7: Crystal structure of a TRAP periplasmic solute binding protein from Citrobacter koseri (CKO_04899), Target EFI-510094, apo, open structure
Classification: TRANSPORT PROTEIN
Source organism: Citrobacter koseri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-11-01
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4ng8: Dialyzed HEW lysozyme batch crystallized in 1.9 M CsCl and collected at 100 K.
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2013-11-01
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ng9: Factor viia in complex with the inhibitor (2R)-2-[(1-aminoisoquinolin-6-yl)amino]-2-[3-ethoxy-4-(propan-2-yloxy)phenyl]-n-(3-sulfamoylbenzyl)ethanamide
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-11-01
Authors: Wei, A., Anumula, R.
PDB entry 4nga: Factor viia in complex with the inhibitor (2R)-2-[(1-aminoisoquinolin-6-yl)amino]-2-[3-ethoxy-4-(propan-2-yloxy)phenyl]-N-[2-(propan-2-ylsulfonyl)benzyl]ethanamide
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-11-01
Authors: Wei, A., Anumula, R.
PDB entry 4ngb: Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having UU-3' ends (2.25 Angstrom resolution)
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-11-01
Authors: Simanshu, D.K., Tian, Y., Patel, D.J.
PDB entry 4ngc: Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having UA-3' ends (2.1 Angstrom resolution)
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2013-11-01
Authors: Simanshu, D.K., Tian, Y., Patel, D.J.
PDB entry 4ngd: Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having 5'-p and UU-3' ends (1.95 Angstrom resolution)
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.958 Å
Deposited: 2013-11-01
Authors: Tian, Y., Simanshu, D.K., Patel, D.J.
PDB entry 4nge: Crystal Structure of Human Presequence Protease in Complex with Amyloid-beta (1-40)
Classification: HYDROLASE/PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.704 Å
Deposited: 2013-11-01
Authors: King, J.V., Liang, W.G., Tang, W.J.
PDB entry 4ngf: Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 17-mer siRNA having 5'-p and UU-3' ends (3.1 Angstrom resolution)
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.101 Å
Deposited: 2013-11-01
Authors: Simanshu, D.K., Tian, Y., Patel, D.J.
PDB entry 4ngg: Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 13-mer siRNA having 5'-A and UU-3' ends (2.6 Angstrom resolution)
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-11-01
Authors: Simanshu, D.K., Tian, Y., Patel, D.J.
PDB entry 4ngh: Crystal structure of the HIV-1 neutralizing antibody 4E10 Fab fragment in complex with a hydrocarbon-stapled peptide containing the 4e10 epitope on gp41 and a tethered phosphate moiety.
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2013-11-01
Authors: Irimia, A., Wilson, I.A.
PDB entry 4ngi: Previously de-ionized HEW lysozyme crystallized in 1.0 M RbCl and collected at 125K
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-11-02
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ngj: Dialyzed HEW lysozyme batch crystallized in 1.0 M RbCl and collected at 100 K
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2013-11-02
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ngk: Previously de-ionized HEW lysozyme batch crystallized in 0.2 M CoCl2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-11-02
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ngl: Previously de-ionized HEW lysozyme batch crystallized in 0.6 M CoCl2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2013-11-02
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ngm: Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2013-11-02
Authors: Tykvart, J., Pachl, P.
PDB entry 4ngn: Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2013-11-02
Authors: Tykvart, J., Pachl, P.
PDB entry 4ngo: Previously de-ionized HEW lysozyme batch crystallized in 1.0 M CoCl2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2013-11-02
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ngp: Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2013-11-02
Authors: Tykvart, J., Pachl, P.
PDB entry 4ngq: Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2013-11-02
Authors: Tykvart, J., Pachl, P.
PDB entry 4ngr: Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-11-02
Authors: Tykvart, J., Pachl, P.
PDB entry 4ngs: Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2013-11-02
Authors: Tykvart, J., Pachl, P.
PDB entry 4ngt: Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2013-11-02
Authors: Tykvart, J., Pachl, P.
PDB entry 4ngu: Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio alaskensis G20 (Dde_1548), Target EFI-510103, with bound D-Ala-D-Ala
Classification: TRANSPORT PROTEIN
Source organism: Desulfovibrio alaskensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-11-02
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4ngv: Previously de-ionized HEW lysozyme batch crystallized in 0.5 M YbCl3
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2013-11-03
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ngw: Dialyzed HEW lysozyme batch crystallized in 0.5 M YbCl3 and collected at 100 K
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2013-11-03
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ngy: Dialyzed HEW lysozyme batch crystallized in 0.75 M YbCl3 and collected at 100 K
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-11-03
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4ngz: Previously de-ionized HEW lysozyme crystallized in 0.5 M YbCl3/30% (v/v) glycerol and collected at 125K
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-11-03
Authors: Benas, P., Legrand, L., Ries-Kautt, M.
PDB entry 4nh0: Cytoplasmic domain of the Thermomonospora curvata Type VII Secretion ATPase EccC
Classification: CELL CYCLE
Source organism: Thermomonospora curvata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-11-03
Authors: Rosenberg, O.S., Cox, J.S., Stroud, R.M., Strauli, N., Dovala, D.
PDB entry 4nh1: Crystal structure of a heterotetrameric CK2 holoenzyme complex carrying the Andante-mutation in CK2beta and consistent with proposed models of autoinhibition and trans-autophosphorylation
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2013-11-04
Authors: Schnitzler, A., Issinger, O.-G., Niefind, K.
PDB entry 4nh2: Crystal structure of AmtB from E. coli bound to phosphatidylglycerol
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-11-04
Authors: Laganowsky, A., Reading, E., Allison, T.M., Robinson, C.V.
PDB entry 4nh3: Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 13-mer siRNA having 5'-pU and UU-3' ends (2.6 Angstrom resolution)
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.616 Å
Deposited: 2013-11-04
Authors: Simanshu, D.K., Tian, Y., Patel, D.J.
PDB entry 4nh4: Structure of the binary complex of a zingiber officinale double bond reductase in complex with NADP
Classification: PLANT PROTEIN
Source organism: ZINGIBER OFFICINALE
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-11-04
Authors: Langlois D'Estaintot, B., Buratto, J., Granier, T., Gallois, B., Willis, M.A., Sang, Y., Flores-Sanchez, I.J., Gang, D.R.
PDB entry 4nh5: Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 14-mer siRNA having 5'-pUU and UU-3' ends (2.55 Angstrom resolution)
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2013-11-04
Authors: Tian, Y., Simanshu, D.K., Patel, D.J.
PDB entry 4nh6: Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 15-mer siRNA having 5'-pUUU and UU-3' ends (2.55 Angstrom resolution)
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.551 Å
Deposited: 2013-11-04
Authors: Simanshu, D.K., Tian, Y., Patel, D.J.
PDB entry 4nh7: Correlation between chemotype-dependent binding conformations of HSP90 alpha/beta and isoform selectivity
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-11-04
Authors: Zuccola, H.J., Ernst, J.
PDB entry 4nh8: Correlation between chemotype-dependent binding conformations of HSP90 alpha/beta and isoform selectivity
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-11-04
Authors: Ernst, J.T., Zuccola, H.J.
PDB entry 4nh9: Correlation between chemotype-dependent binding conformations of HSP90 alpha/beta and isoform selectivity
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2013-11-04
Authors: Zuccola, H.J., Ernst, J.T.