LiteFold/PDB huggingface dataset:
PDB entry 9f2g: Crystal structure of SARS-CoV-2 N-protein C-terminal domain (apo form)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-04-23
Authors: Marquez-Monino, M.A., Gonzalez, B., Perez-Canadillas, J.M.
PDB entry 9f2h: Crystal structure of SARS-CoV-2 N-protein C-terminal domain in complex with riluzole
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-04-23
Authors: Marquez-Monino, M.A., Gonzalez, B., Perez-Canadillas, J.M.
PDB entry 9f2i: Crystal structure of SARS-CoV-2 N-protein C-terminal domain in complex with 2-amino-1,3-benzothiazol-6-ol
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-04-23
Authors: Marquez-Monino, M.A., Gonzalez, B., Perez-Canadillas, J.M.
PDB entry 9f2j: Cryo-EM structure of SV2B-BoNT/A1 complex
Classification: MEMBRANE PROTEIN
Source organism: Clostridium botulinum; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Deposited: 2024-04-23
Authors: Khanppnavar, B., Leka, O., Korkhov, V., Kammerer, R.
PDB entry 9f2k: Myo-inositol-1-phosphate synthase from Thermochaetoides thermophila in complex with NAD
Classification: ISOMERASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2024-04-23
Authors: Traeger, T.K., Kyrilis, F.L., Hamdi, F., Kastritis, P.L.
PDB entry 9f2l: Cryo-EM structure of the I923V MDA5-dsRNA filament with ADP-AlF4 bound and 73-degree helical twist
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2024-04-23
Authors: Singh, R., Herrero del Valle, A., Modis, Y.
PDB entry 9f2m: To be published
Classification: PEPTIDE BINDING PROTEIN
Source organism: Marchantia polymorpha; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-04-23
Authors: Sanchez de Medina, V., Dagdas, Y.
PDB entry 9f2n: Structure of human carbonic anhydrase XII complexed with 3-(cyclooctylamino)-2,6-difluoro-4-((3-hydroxypropyl)sulfonyl)-5-(piperidin-1-yl)benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2024-04-23
Authors: Manakova, E.N., Grazulis, S., Paketuryte, V., Smirnov, A.
PDB entry 9f2o: Structure of human carbonic anhydrase XII complexed with 3-(cyclooctylamino)-2,6-difluoro-4-((3-hydroxypropyl)sulfonyl)-5- methoxybenzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2024-04-23
Authors: Manakova, E.N., Grazulis, S., Paketuryte, V., Smirnov, A.
PDB entry 9f2p: Crystal structure of Keap1 kelch domain in complex with a fluorenone-based small molecule inhibitor at 1.36A resolution
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2024-04-23
Authors: Narayanan, D., Bach, A., Gajhede, M.
PDB entry 9f2q: Crystal structure of Keap1 kelch domain in complex with a tetrahydroisoquinoline-based small molecule inhibitor at 1.2A resolution
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-04-23
Authors: Narayanan, D., Bach, A., Gajhede, M.
PDB entry 9f2r: Influenza A/H17N10 polymerase with bound promoter and 3' end of template in active site
Classification: VIRAL PROTEIN
Source organism: Influenza A virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.959 Å
Deposited: 2024-04-23
Authors: Cusack, S., Drncova, P.
PDB entry 9f2t: Ferric-mycobactin receptor (FemA)
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-04-24
Authors: Moynie, L.
PDB entry 9f2v: Crystal structure of SARS-CoV-2 Mpro in complex with RHTCR02
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.191 Å
Deposited: 2024-04-24
Authors: El kilani, H., Hilgenfeld, R.
PDB entry 9f2w: Cryo-EM structure of the I923V MDA5-dsRNA filament in complex with ATP
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.21 Å
Deposited: 2024-04-24
Authors: Singh, R., Herrero del Valle, A., Modis, Y.
PDB entry 9f2x: Crystal structure of SARS-CoV-2 Mpro in complex with RHTCR03
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-04-24
Authors: El kilani, H., Hilgenfeld, R.
PDB entry 9f2y: Focused refinement of SV2B-LD-BoNT/A1 at pH 5.5
Classification: TOXIN
Source organism: Clostridium botulinum; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.39 Å
Deposited: 2024-04-24
Authors: Khanppnavar, B., Leka, O., Korkhov, V., Kammerer, R.
PDB entry 9f30: Human carbonic anhydrase XII with 3-(Cyclooctylamino)-5-ethoxy-2,6-difluoro-4-((3-hydroxypropyl)sulfonyl)benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2024-04-24
Authors: Manakova, E., Grazulis, S., Smirnov, A., Paketuryte, V.
PDB entry 9f31: Crystal structure of MELK with a covalent compound GCL 99
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-04-24
Authors: Wang, G.Q., Seidler, N., Gehringer, M., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 9f32: Crystal structure of ULK1 with a covalent compound GCL 99
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-24
Authors: Wang, G.Q., Seidler, N., Gehringer, M., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 9f33: Cryo-EM structure of Dopamine 3 Receptor:Go complex bound to bitopic FOB02-04A - Conformation A
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Homo sapiens; Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-04-24
Authors: Arroyo-Urea, S., Garcia-Nafria, J.
PDB entry 9f34: Cryo-EM structure of Dopamine 3 receptor:Go complex bound to bitopic FOB02-04A - Conformation B
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2024-04-24
Authors: Arroyo-Urea, S., Garcia-Nafria, J.
PDB entry 9f35: Co-crystal structure of 14-3-3sigma in complex with B-Raf pS365 phosphopeptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-04-24
Authors: Wu, Q.
PDB entry 9f36: Crystal estructure of AimR from ATCC13952 phage
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-04-25
Authors: Gallego del Sol, F., Marina, A.
PDB entry 9f37: Replication-like initiation state of influenza polymerase with GTP and CTP at respectively the -1 and +1 positions (strain A/little yellow-shouldered bat/Guatemala/060/2010/H17N10)
Classification: VIRAL PROTEIN
Source organism: Influenza A virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.905 Å
Deposited: 2024-04-25
Authors: Cusack, S., Drncova, P.
PDB entry 9f38: BsmI (wild-type) crystallized with Ca2+ and cognate dsDNA
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-04-25
Authors: Sieskind, R., Missoury, S., Madru, C., Commenge, I., Niogret, G., Hollenstein, M., Rondelez, Y., Haouz, A., Sauguet, L., Legrand, P., Delarue, M.
PDB entry 9f39: Crystal structure of SARS-CoV-2 Mpro in complex with RK-54
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-04-25
Authors: El kilani, H., Hilgenfeld, R.
PDB entry 9f3a: Crystal structure of SARS-CoV-2 Mpro in complex with RK-325
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-04-25
Authors: El kilani, H., Hilgenfeld, R.
PDB entry 9f3b: Undecorated 13pf E254Q microtubule from recombinant human tubulin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-04-25
Authors: Estevez-Gallego, J., Blum, T.B., Steinmetz, M.O., Surrey, T.
PDB entry 9f3c: Low-resolution (5.4 angstrom) cryo-EM structure of SV2B-BoNT/A1 at pH 5.5
Classification: MEMBRANE PROTEIN
Source organism: Clostridium botulinum; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.41 Å
Deposited: 2024-04-25
Authors: Khanppnavar, B., Leka, O., Korkhov, V., Kammerer, R.
PDB entry 9f3d: Single acyclic phosphonate nucleotide (S)-ZNA modification on DNA hairpin
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-04-25
Authors: Li, X., Groaz, E., Herdewijn, P., Lescrinier, E.
PDB entry 9f3e: Single acyclic phosphonate nucleotide (R)-ZNA modification on DNA duplex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-04-25
Authors: Li, X., Groaz, E., Herdewyn, P., Lescrinier, E.
PDB entry 9f3f: Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap0
Classification: RNA BINDING PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-04-25
Authors: Bernhard, H., Dolce, L.G., Kowalinski, E.
PDB entry 9f3g: Human carbonic anhydrase XII with 3-(cyclooctylamino)-2,6-difluoro-5-((4-hydroxybutyl)amino)-4-((3-hydroxypropyl)sulfonyl)benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2024-04-25
Authors: Manakova, E., Grazulis, S., Smirnov, A., Paketuryte, V.
PDB entry 9f3h: Undecorated 13pf mosaic 20%E254Q - 80% E254QN microtubule from recombinant human tubulin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-04-25
Authors: Estevez-Gallego, J., Blum, T.B., Steinmetz, M.O., Surrey, T.
PDB entry 9f3i: Crystal structure of Kluyveromyces lactis glucokinase in complex with glucose
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-04-25
Authors: Weisse, R.H., Strater, N.
PDB entry 9f3j: Crystal structure of Kluyveromyces lactis glucokinase in complex with mannose
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-04-25
Authors: Weisse, R.H., Strater, N.
PDB entry 9f3k: Crystal structure of Kluyveromyces lactis glucokinase mutant H304Q in complex with glucose
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-04-25
Authors: Weisse, R.H., Strater, N.
PDB entry 9f3l: Crystal structure of Kluyveromyces lactis glucokinase mutant H304Q in complex with mannose
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-04-25
Authors: Weisse, R.H., Strater, N.
PDB entry 9f3m: Crystal structure of Kluyveromyces lactis glucokinase mutant H304Q in complex with fructose
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-04-25
Authors: Weisse, R.H., Strater, N.
PDB entry 9f3n: Crystal structure of the intermediate open state of apo Kluyveromyces lactis glucokinase
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-04-25
Authors: Weisse, R.H., Strater, N.
PDB entry 9f3o: Crystal structure of the open state of apo Kluyveromyces lactis glucokinase
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2024-04-25
Authors: Weisse, R.H., Kuettner, E.B., Keim, A., Strater, N.
PDB entry 9f3p: Cryo-EM structure of the A946T MDA5-dsRNA filament
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.97 Å
Deposited: 2024-04-25
Authors: Singh, R., Herrero del Valle, A., Modis, Y.
PDB entry 9f3q: Poliovirus type 1 (strain Mahoney) stabilised virus-like particle (PV1 SC6b) in complex with GPP3 and GSH.
Classification: VIRUS LIKE PARTICLE
Source organism: Human poliovirus 1 Mahoney
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2024-04-25
Authors: Bahar, M.W., Nasta, V., Sherry, L., Stonehouse, N.J., Rowlands, D.J., Fry, E.E., Stuart, D.I.
PDB entry 9f3r: 13pf E254Q microtubule from recombinant human tubulin decorated with EB3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-04-25
Authors: Estevez-Gallego, J., Blum, T.B., Steinmetz, M.O., Surrey, T.
PDB entry 9f3s: 13pf mosaic 20%E254Q - 80% E254N microtubule from recombinant human tubulin decorated with EB3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-04-25
Authors: Estevez-Gallego, J., Blum, T.B., Steinmetz, M.O., Surrey, T.
PDB entry 9f3t: Active SV40 LTAg complex with DNA (3D variability component_000, frame_010).
Classification: DNA BINDING PROTEIN
Source organism: Betapolyomavirus macacae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-04-25
Authors: Shahid, T.
PDB entry 9f3u: Active SV40 LTAg complex with DNA (3D variability component_001, frame_010).
Classification: DNA BINDING PROTEIN
Source organism: Betapolyomavirus macacae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-04-26
Authors: Shahid, T.
PDB entry 9f3v: RIP2K kinase domain dimer with bound compound 37 (N399), a speific NOD1 pathway inhibitor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.943 Å
Deposited: 2024-04-26
Authors: Cusack, S., Huard, K., Pellegrini, E.
PDB entry 9f3w: CutC choline lyase in complex with fluoromethylcholine
Classification: LYASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-04-26
Authors: Kalnins, G.
PDB entry 9f3x: CutC choline lyase in complex with cyclopropylcholine
Classification: LYASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-04-26
Authors: Kalnins, G.
PDB entry 9f3y: CutC choline lyase in complex with difluorocholine
Classification: LYASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-04-26
Authors: Kalnins, G.
PDB entry 9f3z: Psychrophilic laccase (multicopper oxidase) from Oenococcus oeni 229 with Histag
Classification: OXIDOREDUCTASE
Source organism: Oenococcus oeni
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2024-04-26
Authors: Paredes, F., Casino, P.
PDB entry 9f40: Crystal structure of the NTD domain from S. cerevisia Niemann-Pick type C protein NCR1 with ergosterol bound
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2024-04-26
Authors: Nel, L., Olesen, E., Frain, K.M., Pedersen, B.P.
PDB entry 9f41: Crystal structure of the NTD domain from S. cerevisia Niemann-Pick type C protein NCR1 with cholesterol bound
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2024-04-26
Authors: Nel, L., Olesen, E., Frain, K.M., Pedersen, B.P.
PDB entry 9f42: cryo-EM structure of LST2 TOS peptide bound to human mTOR complex 1, focused on RAPTOR
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2024-04-26
Authors: Craigie, L.M., Maier, T.
PDB entry 9f43: cryo-EM structure of human LST2 bound to human mTOR complex 1, focused on RAPTOR
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-04-26
Authors: Craigie, L.M., Maier, T.
PDB entry 9f44: cryo-EM structure of LST2 TOS peptide bound to human mTOR complex 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2024-04-26
Authors: Craigie, L.M., Maier, T.
PDB entry 9f45: cryo-EM structure of human LST2 bound to human mTOR complex 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2024-04-26
Authors: Craigie, L.M., Maier, T.
PDB entry 9f46: crystal structure of apo-[FeFe]-hydrogenase CbA5H from Clostridium beijerinckii
Classification: OXIDOREDUCTASE
Source organism: Clostridium beijerinckii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-04-26
Authors: Duan, J., Rutz, A., Hofmann, E., Happe, T., Kurisu, G.
PDB entry 9f47: crystal structure of [FeFe]-hydrogenase CbA5H from Clostridium beijerinckii in Hinact state
Classification: OXIDOREDUCTASE
Source organism: Clostridium beijerinckii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-04-26
Authors: Duan, J., Rutz, A., Hofmann, E., Happe, T., Kurisu, G.
PDB entry 9f48: KS + AT di-domain of polyketide synthase 13 in Mycobacterium tuberculosis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-04-26
Authors: Johnston, H.E., Futterer, K.
PDB entry 9f49: Structure of the bacteriophage K gp155 C-terminal domain, seleno-methionine modified version
Classification: VIRAL PROTEIN
Source organism: Staphylococcus phage K
Experimental method: X-RAY DIFFRACTION
Resolution: 1.621 Å
Deposited: 2024-04-26
Authors: Pichel, A., van Raaij, M.J.
PDB entry 9f4a: Interface between baseplate cup and extended tail tube/sheath of Klebsiella phage KP1 variant vB_Kpn_Lilla1
Classification: VIRUS
Source organism: Klebsiella phage KP1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2024-04-26
Authors: Orlova, E.V., Isupov, M.N.
PDB entry 9f4b: Pre-assembled baseplate cup of Klebsiella phage KP1 variant vB_Kpn_Lilla1
Classification: VIRUS
Source organism: Klebsiella phage KP1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-04-26
Authors: Orlova, E.V., Isupov, M.N.
PDB entry 9f4c: Structure of the C-terminal domain of CKAP5/chTOG
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-04-27
Authors: Pfuhl, M.
PDB entry 9f4d: UP1 in complex with Z1203107138
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-04-27
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4g: UP1 in complex with Z1373445602
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-27
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4h: UP1 in complex with Z106579662
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-27
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4i: Room temperature structure of Glycine max phyA in Pfr
Classification: PLANT PROTEIN
Source organism: Glycine max
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-04-28
Authors: Nagano, S., Hughes, J.
PDB entry 9f4j: UP1 in complex with Z416341642
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4k: UP1 in complex with ZINC72259689
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4l: UP1 in complex with Z104584152
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4n: UP1 in complex with Z137811222
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4o: UP1 in complex with Z991506900
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4p: UP1 in complex with Z1217960891
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4q: UP1 in complex with Z641239276
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4r: UP1 in complex with Z802821712
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4s: UP1 in complex with Z56880342
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4t: UP1 in complex with EN300-805013
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4u: UP1 in complex with Z111529496
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4v: UP1 in complex with EN300-118084
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4w: UP1 in complex with Z54508609
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4x: UP1 in complex with Z1220452176
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4y: UP1 in complex with Z90120418
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f4z: UP1 in complex with Z57040482
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f50: UP1 in complex with Z906021418
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f51: UP1 in complex with Z608065044
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f52: UP1 in complex with Z734147462
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f53: UP1 in complex with Z237527902
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f54: UP1 in complex with EN300-197154
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f55: UP1 in complex with Z235361315
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f56: Identification of calcium ions in thermolysin.
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-28
Authors: El Omari, K., Forsyth, I., Wagner, A.
PDB entry 9f58: Gcn2 dimer bound to the 60S ribosomal subunit
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-04-28
Authors: Paternoga, H., Dimitrova-Paternoga, L., Wilson, D.N.
PDB entry 9f59: Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from a mammalian expression system.
Classification: VIRUS LIKE PARTICLE
Source organism: Poliovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-04-28
Authors: Bahar, M.W., Porta, C., Fry, E.E., Stuart, D.I.
PDB entry 9f5a: Crystal structure of a parallel eight-helix coiled coil CC-Type2-II-I17V-I21F
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-04-28
Authors: Petrenas, R., Woolfson, D.N.
PDB entry 9f5b: Identification of zinc ions in LMO4.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-28
Authors: El Omari, K., Forsyth, I., Mancini, E.J., Wagner, A.
PDB entry 9f5c: UP1 in complex with Z198195770
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f5d: UP1 in complex with Z641230552
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f5e: UP1 in complex with Z30820160
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f5f: UP1 in complex with Z992569480
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f5g: UP1 in complex with EN300-115958
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-28
Authors: Dunnett, L., Prischi, F.
PDB entry 9f5h: Crystal structure of MGAT5 bump-and-hole mutant in complex with UDP and M592
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2024-04-28
Authors: Liu, Y., Bineva-Todd, G., Meek, R., Mazo, L., Piniello, B., Moroz, O.V., Begum, N., Roustan, C., Tomita, S., Kjaer, S., Rovira, C., Davies, G.J., Schumann, B.
PDB entry 9f5i: Active SV40 LTAg complex with DNA (3D variability component_000, frame_005).
Classification: DNA BINDING PROTEIN
Source organism: Betapolyomavirus macacae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-04-28
Authors: Shahid, T.
PDB entry 9f5j: SARS-CoV-2 Nucleocapsid N-terminal domain (NTD) mutant Q58I
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-04-29
Authors: Dhamotharan, K., Schlundt, A.
PDB entry 9f5k: UP1 in complex with Z33546965
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-04-29
Authors: Dunnett, L., Prischi, F.
PDB entry 9f5l: SARS-CoV-2 Nucleocapsid N-terminal domain (NTD) mutant A119S
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.363 Å
Deposited: 2024-04-29
Authors: Dhamotharan, K., Schlundt, A.
PDB entry 9f5m: Structure of the C-terminal domain of bacteriophage K gp155, native
Classification: VIRAL PROTEIN
Source organism: Staphylococcus phage K
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2024-04-29
Authors: Pichel, A., van Raaij, M.J.
PDB entry 9f5n: CryoEM structure of open sTeLIC in detergent, in complex with n-Dodecyl-Beta-Maltoside
Classification: MEMBRANE PROTEIN
Source organism: endosymbiont of Tevnia jerichonana (vent Tica)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2024-04-29
Authors: Anden, O., Howard, R.J., Lindahl, E.
PDB entry 9f5o: CryoEM structure of open sTeLIC in detergent, with 4-Bromoamphetamine
Classification: MEMBRANE PROTEIN
Source organism: endosymbiont of Tevnia jerichonana (vent Tica)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.16 Å
Deposited: 2024-04-29
Authors: Anden, O., Howard, R.J., Lindahl, E.
PDB entry 9f5p: Poliovirus type 2 (strain MEF-1) stabilised virus-like particle (PV2 SC6b) from an insect cell expression system.
Classification: VIRUS LIKE PARTICLE
Source organism: Poliovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-04-29
Authors: Bahar, M.W., Porta, C., Fry, E.E., Stuart, D.I.
PDB entry 9f5q: Crystal structure of selenomethionine-labelled kinetoplastid kinetochore protein KKT23 acetyltransferase domain from Trypanosoma brucei
Classification: CELL CYCLE
Source organism: Trypanosoma brucei brucei TREU927
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-04-30
Authors: Ludzia, P., Ishii, M., Akiyoshi, B.
PDB entry 9f5r: Holo IDO with a bound inhibitor
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.694 Å
Deposited: 2024-04-30
Authors: Wicki, M., Mac Sweeney, A.
PDB entry 9f5s: EVA71 E096A native particle
Classification: VIRUS
Source organism: Enterovirus A71
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-04-30
Authors: Kingston, N.J., Stonehouse, N.J., Rowlands, D.J., Hogle, J.M., Filman, D.J., Snowden, J.S.S.
PDB entry 9f5t: Ubiquitin C-terminal clippase BpJOS
Classification: HYDROLASE
Source organism: Burkholderia pyrrocinia; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2024-04-30
Authors: Uthoff, M., Hermanns, T., Birkmann, S., Hofmann, K., Baumann, U.
PDB entry 9f5u: Crystal structure of Heme-Oxygenase from Corynebacterium diphtheriae complexed with Cobalt-porphyrine (HumO-Co(III))
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2024-04-30
Authors: Labidi, R.J., Faivre, B., Carpentier, P., Perard, J., Gotico, P., Li, Y., Atta, M., Fontecave, M.
PDB entry 9f5v: Crystal structure of thiol peroxidase from Helicobacter pylori (HpTx, reduced)
Classification: OXIDOREDUCTASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-04-30
Authors: Fiedler, M.K., Gong, R., Fuchs, S., Rox, K., Friedrich, V., Pfeiffer, D., Reinhardt, T., Mibus, C., Huber, M., Hess, C., Mejias-Luque, R., Gerhard, M., Groll, M., Sieber, S.A.
PDB entry 9f5w: Human condensin II - M18BP1 complex
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2024-04-30
Authors: Borsellini, A., Vannini, A.
PDB entry 9f5x: Structure of the Chlamydomonas reinhardtii respiratory supercomplex I1 III2 IV2
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-04-30
Authors: Waltz, F., Righetto, R., Kotecha, A., Engel, B.D.
PDB entry 9f5y: Structure of the Chlamydomonas reinhardtii respiratory complex I from respiratory supercomplex
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2024-04-30
Authors: Waltz, F., Righetto, R., Kotecha, A., Engel, B.D.
PDB entry 9f5z: Structure of the Chlamydomonas reinhardtii respiratory complex III from respiratory supercomplex
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2024-04-30
Authors: Waltz, F., Righetto, R., Kotecha, A., Engel, B.D.
PDB entry 9f60: Structure of the Chlamydomonas reinhardtii respiratory complex IV from respiratory supercomplex
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2024-04-30
Authors: Waltz, F., Righetto, R., Kotecha, A., Engel, B.D.
PDB entry 9f61: Structure of the Chlamydomonas reinhardtii respiratory complex IV from respiratory supercomplex
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-04-30
Authors: Waltz, F., Righetto, R., Kotecha, A., Engel, B.D.
PDB entry 9f62: Subtomogram average of the Chlamydomonas reinhardtii mitochondrial respirasome I2 III4 IV6
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.44 Å
Deposited: 2024-04-30
Authors: Waltz, F., Righetto, R., Kotecha, A., Engel, B.D.
PDB entry 9f63: Crystal structure of Saccharomyces cerevisiae pH nine-sensitive protein 1 (PNS1)
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2024-04-30
Authors: Driller, J.H., Pedersen, B.P.
PDB entry 9f64: Crystal structure of thiol peroxidase mutant (C94A) in complex with Metro* (H. pylori
Classification: OXIDOREDUCTASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-04-30
Authors: Fiedler, M.K., Gong, R., Fuchs, S., Rox, K., Friedrich, V., Pfeiffer, D., Reinhardt, T., Mibus, C., Huber, M., Hess, C., Mejias-Luque, R., Gerhard, M., Groll, M., Sieber, S.A.
PDB entry 9f65: Crystal structure of thiol peroxidase mutant (C94A) in complex with Metro-P3* (H. pylori)
Classification: OXIDOREDUCTASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-04-30
Authors: Fiedler, M.K., Gong, R., Fuchs, S., Rox, K., Friedrich, V., Pfeiffer, D., Reinhardt, T., Mibus, C., Huber, M., Hess, C., Mejias-Luque, R., Gerhard, M., Groll, M., Sieber, S.A.
PDB entry 9f66: Crystal structure of Heme-Oxygenase from Corynebacterium diphtheriae complexed with Cobalt-porphyrine (HumO-Co(III)) flash-cooled under CO2 pressure
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-04-30
Authors: Labidi, R.J., Faivre, B., Carpentier, P., Perard, J., Gotico, P., Li, Y., Atta, M., Fontecave, M.
PDB entry 9f67: Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap4
Classification: RNA BINDING PROTEIN
Source organism: Trypanosoma brucei brucei; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-04-30
Authors: Bernhard, H., Warminski, M., Dolce, L.G., Kowalinski, E.
PDB entry 9f69: Crystal structure of human triose phosphate isomerase with methyl malonic acid ligand
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2024-04-30
Authors: Jonatansdottir, Y.Y., Hjorleifsson, G.J.
PDB entry 9f6a: EVA71 E096A native particle
Classification: VIRUS
Source organism: Enterovirus A71
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-04-30
Authors: Kingston, N.J., Stonehouse, N.J., Rowlands, D.J., Hogle, J.M., Filman, D.J., Snowden, J.S.S.
PDB entry 9f6b: Human neuropilin-1 in a complex with a quinoline based antagonists
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-04-30
Authors: Djordjevic, S., Selwood, D., Hubbard, P., Leonard, P., Mota, F.
PDB entry 9f6c: Cardiac myosin motor domain in the pre-powerstroke state co-crystallized with the inhibitor aficamten
Classification: MOTOR PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2024-05-01
Authors: Robert-Paganin, J., Hartman, J.J., Morgan, B.P., Malik, F.I., Houdusse, A.
PDB entry 9f6d: Human DNA polymerase epsilon bound to DNA and PCNA (open conformation)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-01
Authors: Roske, J.J., Yeeles, J.T.P.
PDB entry 9f6e: Human DNA polymerase epsilon bound to DNA and PCNA (ajar conformation)
Classification: REPLICATION
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2024-05-01
Authors: Roske, J.J., Yeeles, J.T.P.
PDB entry 9f6f: Human DNA polymerase epsilon bound to DNA and PCNA (closed conformation)
Classification: REPLICATION
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2024-05-01
Authors: Roske, J.J., Yeeles, J.T.P.
PDB entry 9f6g: Human USP30 chimera bound to Ubiquitin-PA
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-05-01
Authors: Kazi, N.H., Gersch, M.
PDB entry 9f6h: Crystal structure of bovine alpha-chymotrypsin in complex with the bicyclic peptide inhibitor MP5.4.3
Classification: HYDROLASE
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2024-05-01
Authors: Vascon, F., Mazzocato, Y., Trevisan, L., Linciano, S., Romanyuk, Z., Angelini, A., Cendron, L.
PDB entry 9f6i: Human DNA Polymerase epsilon bound to T-C mismatched DNA (Post-Insertion state)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-01
Authors: Roske, J.J., Yeeles, J.T.P.
PDB entry 9f6j: Human DNA Polymerase epsilon bound to T-C mismatched DNA (Polymerase Arrest state)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-05-01
Authors: Roske, J.J., Yeeles, J.T.P.
PDB entry 9f6k: Human DNA Polymerase epsilon bound to T-C mismatched DNA (Frayed Substrate state)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-05-01
Authors: Roske, J.J., Yeeles, J.T.P.
PDB entry 9f6l: Human DNA Polymerase epsilon bound to T-C mismatched DNA (Mismatch Excision state)
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-05-01
Authors: Roske, J.J., Yeeles, J.T.P.
PDB entry 9f6n: Human divalent metal transporter 1 (DMT1/SLC11A2) in complex with manganese, in an occluded state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-02
Authors: Liziczai, M., Dutzler, R.
PDB entry 9f6o: Human divalent metal transporter 1 (DMT1/SLC11A2) in complex with sybody 1, in an occluded state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-05-02
Authors: Liziczai, M., Dutzler, R.
PDB entry 9f6p: Human NRAMP1 (SLC11A1) in complex with manganese, towards the inward-open state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-05-02
Authors: Liziczai, M., Dutzler, R.
PDB entry 9f6q: Human NRAMP1 (SLC11A1) in an occluded state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-05-02
Authors: Liziczai, M., Dutzler, R.
PDB entry 9f6r: Crystal structure of human acetylcholinesterase in complex with the uncharged hybrid reactivator quinoline-3-hydroxy-pyridinaldoxime
Classification: HYDROLASE
Source organism: Myxococcaceae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-05-02
Authors: Dias, J., Nachon, F.
PDB entry 9f6s: PDZ domain in complex with the peptide from AP2-associated protein kinase 1
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2024-05-02
Authors: Benova, V., Boura, E.
PDB entry 9f6t: cryoEM structure of Asgard tubulin heterodimer AtubA/B with GTP
Classification: CYTOSOLIC PROTEIN
Source organism: Candidatus Lokiarchaeum ossiferum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-05-02
Authors: Wollweber, F., Xu, J., Ponce-Toled, R.I., Rodrigues-Oliveira, T., Malit, J.J.L., Kokhanovska, A., Schleper, C., Pilhofer, M.
PDB entry 9f6u: cryoEM structure of Asgard tubulin heterodimer AtubA/B with GDP
Classification: CYTOSOLIC PROTEIN
Source organism: Candidatus Lokiarchaeum ossiferum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-02
Authors: Wollweber, F., Xu, J., Ponce-Toled, R.I., Rodrigues-Oliveira, T., Malit, J.J.L., Kokhanovska, A., Schleper, C., Pilhofer, M.
PDB entry 9f6v: cryoEM structure of Asgard tubulin heterodimer AtubA/B2 with GTP
Classification: CYTOSOLIC PROTEIN
Source organism: Candidatus Lokiarchaeum ossiferum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-05-02
Authors: Wollweber, F., Xu, J., Ponce-Toled, R.I., Rodrigues-Oliveira, T., Malit, J.J.L., Kokhanovska, A., Schleper, C., Pilhofer, M.
PDB entry 9f6w: BAZ2A bromodomain in complex with acetylpyrrole derivative compound 1-TND14
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-05-02
Authors: Dalle Vedove, A., Cazzanelli, G., Caflisch, A., Lolli, G.
PDB entry 9f6x: Human transforming growth factor b type I receptor in complex with kinase inhibitor SB505124
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2024-05-02
Authors: Rodriguez Buitrago, J.A., Landstrom, M., Wolf-Watz, M.
PDB entry 9f6y: CryoEM structure of Human Mediator subunit MED23 complexed with phosphorylated Elk-1 transcription factor
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-05-02
Authors: Monte, D., Verger, A., Lens, Z., villeret, V.
PDB entry 9f6z: Human N-deacetylase/N-sulfotransferase 1 homodimer
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2024-05-02
Authors: Wild, R., Lortat-Jacob, H., Vallet, S.D.
PDB entry 9f70: BAZ2A bromodomain in complex with acetylpyrrole derivative compound 23-TND13
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-02
Authors: Dalle Vedove, A., Cazzanelli, G., Caflisch, A., Lolli, G.
PDB entry 9f71: BAZ2A bromodomain in complex with acetylpyrrole derivative compound 26-TND18
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-05-02
Authors: Dalle Vedove, A., Cazzanelli, G., Caflisch, A., Lolli, G.
PDB entry 9f73: Active SV40 LTAg complex with DNA (3D variability component_002, frame_015).
Classification: DNA BINDING PROTEIN
Source organism: Betapolyomavirus macacae; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-03
Authors: Shahid, T.
PDB entry 9f74: Active SV40 LTAg complex with DNA (3D variability component_000, frame_015).
Classification: DNA BINDING PROTEIN
Source organism: Betapolyomavirus macacae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-03
Authors: Shahid, T.
PDB entry 9f75: Active SV40 LTAg complex with DNA (3D variability component_000, frame_019).
Classification: DNA BINDING PROTEIN
Source organism: Betapolyomavirus macacae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-03
Authors: Shahid, T.
PDB entry 9f76: CryoEM structure of human Mediator subunit Med23
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-03
Authors: Monte, D., Verger, A., Lens, Z., Villeret, V.
PDB entry 9f77: BAZ2A bromodomain in complex with acetylpyrrole derivative compound 27-TND19
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2024-05-03
Authors: Dalle Vedove, A., Cazzanelli, G., Caflisch, A., Lolli, G.
PDB entry 9f78: BAZ2A bromodomain in complex with acetylpyrrole derivative compound 28-TN23
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-03
Authors: Dalle Vedove, A., Cazzanelli, G., Caflisch, A., Lolli, G.
PDB entry 9f79: Crystal structure of the S. cerevisiae eIF2beta N-terminal tail bound to the C-terminal domain of eIF5
Classification: TRANSLATION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-03
Authors: Kuhle, B., Marintchev, A., Ficner, R.
PDB entry 9f7a: SARS-CoV-2 Nucleocapsid N-terminal domain (NTD) mutant P80R
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-05-03
Authors: Dhamotharan, K., Schlundt, A.
PDB entry 9f7b: Thioesterase domain (GbnD6 TE domain) from the gladiolin PKS
Classification: HYDROLASE
Source organism: Burkholderia gladioli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-03
Authors: Alkhalaf, L.M., Pang, F., Fage, C.
PDB entry 9f7c: SARS-CoV-2 Nucleocapsid N-terminal domain (NTD) mutant S105I
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-03
Authors: Dhamotharan, K., Schlundt, A.
PDB entry 9f7d: Rhodococcus diDNase bound to deoxy-pGG
Classification: HYDROLASE
Source organism: Rhodococcus ruber; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-03
Authors: Mortensen, S., Sondermann, H.
PDB entry 9f7e: CtdA Canavanine tRNA-editing deacetylase from Pseudomonas canavaninivorans
Classification: RNA BINDING PROTEIN
Source organism: Pseudomonas canavaninivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-05-03
Authors: Tabagari, N., Mayans, O.