LiteFold/PDB huggingface dataset:
PDB entry 5m1s: Cryo-EM structure of the E. coli replicative DNA polymerase-clamp-exonuclase-theta complex bound to DNA in the editing mode
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K12; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2016-10-10
Authors: Fernandez-Leiro, R., Conrad, J., Scheres, S.H.W., Lamers, M.H.
PDB entry 5m1t: PaMucR Phosphodiesterase, c-di-GMP complex
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2016-10-10
Authors: Hutchin, A., Tews, I., Walsh, M.A.
PDB entry 5m1u: Solution structure of CsgF in DHPC micelles
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 2016-10-10
Authors: Spehr, J., Schubeis, T., Ahmed, M., Ritter, C.
PDB entry 5m1w: Structure of a stable G-hairpin
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-10-11
Authors: Gajarsky, M., Zivkovic, M.L., Stadlbauer, P., Pagano, B., Fiala, R., Amato, J., Tomaska, L., Sponer, J., Plavec, J., Trantirek, L.
PDB entry 5m1x: Crystal structure of S. cerevisiae Rfa1 N-OB domain mutant (K45E)
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-10-11
Authors: Seeber, A., Hegnauer, A.M., Hustedt, N., Deshpande, I., Poli, J., Eglinger, J., Pasero, P., Gut, H., Shinohara, M., Hopfner, K.P., Shimada, K., Gasser, S.M.
PDB entry 5m1y: The case of 1lkr held at the PDB and its variable amino acid occupancies; re refinement of 4ow9 to correct this
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.904 Å
Deposited: 2016-10-11
Authors: Helliwell, J.R.
PDB entry 5m1z: STRUCTURE OF THE ALPHA-L-ARABINOFURANOSIDASE ARB93A FROM FUSARIUM GRAMINEARUM IN COMPLEX WITH AN hydroximolactone INHIBITOR
Classification: HYDROLASE
Source organism: Gibberella zeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-10-11
Authors: Varrot, A.
PDB entry 5m21: Crystal structure of hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3 with 4-hydroxybenzoate bound
Classification: OXIDOREDUCTASE
Source organism: Sphingomonas sp. TTNP3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2016-10-11
Authors: Ferraroni, M., Da Vela, S., Scozzafava, A., Kolvenbach, B., Corvini, P.F.X.
PDB entry 5m22: Crystal structure of hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3
Classification: OXIDOREDUCTASE
Source organism: Sphingomonas sp. TTNP3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-10-11
Authors: Ferraroni, M., Da Vela, S., Scozzafava, A., Kolvenbach, B., Corvini, P.F.X.
PDB entry 5m23: Modulation of MLL1 Methyltransferase Activity
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2016-10-11
Authors: Srinivasan, V.
PDB entry 5m24: RARg mutant-S371E
Classification: NUCLEAR RECEPTOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2016-10-11
Authors: Rochel, N., Sirigu, S.
PDB entry 5m25: Modulation of MLL1 Methyltransferase Activity
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2016-10-11
Authors: Srinivasan, V.
PDB entry 5m26: Crystal structure of hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3 in complex with methylhydroquinone
Classification: OXIDOREDUCTASE
Source organism: Sphingomonas sp. TTNP3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-10-12
Authors: Ferraroni, M., Da Vela, S., Scozzafava, A., Kolvenbach, B., Corvini, P.F.X.
PDB entry 5m27: Structure of a bacterial light-regulated adenylyl cylcase
Classification: LYASE
Source organism: Beggiatoa sp. PS
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-10-12
Authors: Lindner, R., Hartmann, E., Tarnawski, M., Winkler, A., Frey, D., Reinstein, J., Meinhart, A., Schlichting, I.
PDB entry 5m28: Maltodextrin binding protein MalE1 from L. casei BL23 bound to maltotriose
Classification: SUGAR BINDING PROTEIN
Source organism: Lactobacillus casei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.079 Å
Deposited: 2016-10-12
Authors: Homburg, C., Bommer, M., Wuttge, S., Hobe, C., Beck, S., Dobbek, H., Deutscher, J., Licht, A., Schneider, E.
PDB entry 5m29: Structure of cobinamide-bound BtuF, the periplasmic vitamin B12 binding protein in E.coli
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-10-12
Authors: Mireku, S.A., Ruetz, M., Zhou, T., Korkhov, V.M., Kraeutler, B., Locher, K.P.
PDB entry 5m2a: Structure of a bacterial light-regulated adenylyl cylcase
Classification: LYASE
Source organism: Beggiatoa sp. PS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-10-12
Authors: Lindner, R., Hartmann, E., Tarnawski, M., Winkler, A., Frey, D., Reinstein, J., Meinhart, A., Schlichting, I.
PDB entry 5m2b: Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with thiazole based inhibitor Ro19
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-10-12
Authors: Groll, M.
PDB entry 5m2c: Structural tuning of CD81LEL (space group P32 1 2)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.961 Å
Deposited: 2016-10-12
Authors: Cunha, E.S., Sfriso, P., Rojas, A.L., Roversi, P., Hospital, A., Orozco, M., Abrescia, N.G.
PDB entry 5m2d: CRYSTAL STRUCTURE 4Ac Endoglucanase-like protein from Acremonium chrysogenum
Classification: HYDROLASE
Source organism: Acremonium chrysogenum ATCC 11550
Experimental method: X-RAY DIFFRACTION
Resolution: 2.097 Å
Deposited: 2016-10-12
Authors: Gabdulkhakov, A., Tishchenko, S.
PDB entry 5m2e: Apo structure of Pseudomonas aeruginosa Isocitrate Dehydrogenase, ICD.
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-10-12
Authors: Crousilles, A., Welch, M.
PDB entry 5m2f: Crystal structure of human AKR1B10 complexed with NADP+ and the synthetic retinoid UVI2008
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.503 Å
Deposited: 2016-10-12
Authors: Ruiz, F.X., Cousido-Siah, A., Mitschler, A., Porte, S., Alvarez, S., Dominguez, M., Alvarez, R., de Lera, A.R., Pares, X., Farres, J., Podjarny, A.
PDB entry 5m2g: PCE reductive dehalogenase from S. multivorans in complex with 2,4,6-tribromophenol
Classification: OXIDOREDUCTASE
Source organism: Sulfurospirillum multivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-10-12
Authors: Kunze, C., Bommer, M., Hagen, W.R., Uksa, M., Dobbek, H., Schubert, T., Diekert, G.
PDB entry 5m2h: Crystal structure of vancomycin-Zn(II)-citrate complex
Classification: ANTIBIOTIC
Source organism: Amycolatopsis orientalis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2016-10-13
Authors: Zarkan, A., Macklyne, H.-R., Chirgadze, D.Y., Bond, A.D., Hesketh, A.R., Hong, H.-J.
PDB entry 5m2i: Structure of human Tumor Necrosis Factor (TNF) in complex with the Llama VHH1
Classification: CYTOKINE
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2016-10-13
Authors: Cambillau, C., Spinelli, S., Desmyter, A., de Haard, H.
PDB entry 5m2j: Complex between human TNF alpha and Llama VHH2
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-10-13
Authors: Cambillau, C., Spinelli, S., Desmyter, A., de Haard, H.
PDB entry 5m2k: Crystal structure of vancomycin-Zn(II) complex
Classification: ANTIBIOTIC
Source organism: Amycolatopsis orientalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2016-10-13
Authors: Zarkan, A., Macklyne, H.-R., Chirgadze, D.Y., Bond, A.D., Hesketh, A.R., Hong, H.-J.
PDB entry 5m2l: Structure of DNA tetrameric AGCGA-quadruplex adopted by 15-mer d(GCGAGGGAGCGAGGG), VK34, oligonucleotide found in regulatory region of the PLEKHG3 human gene
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-10-13
Authors: Kocman, V., Plavec, J.
PDB entry 5m2m: Complex between human TNF alpha and Llama VHH3
Classification: CYTOKINE
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-10-13
Authors: Cambillau, C., Spinelli, S., Desmyter, A., de Haard, H.
PDB entry 5m2n: Crystal Structure of Elongator subunit Elp2
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.812 Å
Deposited: 2016-10-13
Authors: Glatt, S., Mueller, C.W.
PDB entry 5m2o: R. flavefaciens' third ScaB cohesin in complex with a group 1 dockerin
Classification: PROTEIN BINDING
Source organism: Ruminococcus flavefaciens FD-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2016-10-13
Authors: Bule, P., Najmudin, S., Carvalho, A.L., Fontes, C.M.G.A.
PDB entry 5m2p: The Structure of the Ycf54 protein from Synechocystis sp. PCC6803
Classification: PHOTOSYNTHESIS
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2016-10-13
Authors: Baker, P.J., Bliss, S., Hollinshead, S., Hunter, C.N.
PDB entry 5m2q: Structure of cobinamide-bound BtuF mutant W66F, the periplasmic vitamin B12 binding protein in E.coli
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-10-13
Authors: Mireku, S.A., Ruetz, M., Zhou, T., Korkhov, V.M., Kraeutler, B., Locher, K.P.
PDB entry 5m2r: The Structure of the Ycf54 A9G mutant protein from Synechocystis sp. PCC6803
Classification: PHOTOSYNTHESIS
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-10-13
Authors: Baker, P.J., Bliss, S., Hollinshead, S., Hunter, N.
PDB entry 5m2s: R. flavefaciens' third ScaB cohesin in complex with a group 1 dockerin
Classification: PROTEIN BINDING
Source organism: Ruminococcus flavefaciens; Ruminococcus flavefaciens FD-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-10-13
Authors: Bule, P., Najmudin, S., Carvalho, A.L., Fontes, C.M.G.A.
PDB entry 5m2t: X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution
Classification: TRANSFERASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2016-10-13
Authors: Prokofev, I.I., Lashkov, A.A., Gabdulkhakov, A.G., Betzel, C., Mikhailov, A.M.
PDB entry 5m2u: The Structure of the Ycf54 protein from Synechocystis sp. PCC6803
Classification: PHOTOSYNTHESIS
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-10-13
Authors: Baker, P.J., Bliss, S., Hollingshead, S., Hunter, C.N.
PDB entry 5m2v: Structure of GluK1 ligand-binding domain (S1S2) in complex with (2S,4R)-4-(2-carboxyphenoxy)pyrrolidine-2-carboxylic acid at 3.18 A resolution
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å
Deposited: 2016-10-13
Authors: Frydenvang, K., Kastrup, J.S., Kristensen, C.M.
PDB entry 5m2w: Structure of nanobody nb18 raised against TssK from E. coli T6SS
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-10-13
Authors: Cambillau, C., Nguyen, V.S., Spinelli, S., Desmyter, A.
PDB entry 5m2x: Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)
Classification: VIRAL PROTEIN
Source organism: Zika virus (strain Mr 766)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.991 Å
Deposited: 2016-10-13
Authors: Ferrero, D.S., Ruiz-Arroyo, V.M., Soler, N., Uson, I., Verdaguer, N.
PDB entry 5m2y: Structure of TssK C-terminal domain from E. coli T6SS
Classification: SECRETION PROTEIN
Source organism: Escherichia coli (strain 55989 / EAEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2016-10-13
Authors: Cambillau, C., Nguyen, V.S., Spinelli, S., Desmyter, A., Legrand, P.
PDB entry 5m2z: Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)
Classification: HYDROLASE
Source organism: Zika virus (strain Mr 766)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.8 Å
Deposited: 2016-10-13
Authors: Ferrero, D.S., Ruiz-Arroyo, V.M., Soler, N., Uson, I., Verdaguer, N.
PDB entry 5m30: Structure of TssK from T6SS EAEC in complex with nanobody nb18
Classification: SECRETION SYSTEM
Source organism: Escherichia coli; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-10-13
Authors: Nguyen, V.S., Cambillau, C., Spinelli, C., Desmyter, A., Legrand, P., Cascales, E.
PDB entry 5m31: Macrodomain of Thermus aquaticus DarG
Classification: ANTITOXIN
Source organism: Thermus aquaticus Y51MC23
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2016-10-13
Authors: Ariza, A.
PDB entry 5m32: Human 26S proteasome in complex with Oprozomib
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2016-10-14
Authors: Haselbach, D., Schrader, J., Lambrecht, F., Henneberg, F., Chari, A., Stark, H.
PDB entry 5m33: Structural tuning of CD81LEL (space group P21)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2016-10-14
Authors: Cunha, E.S., Sfriso, P., Rojas, A.L., Roversi, P., Hospital, A., Orozco, M., Abrescia, N.G.
PDB entry 5m34: Structure of cobinamide-bound BtuF mutant W66Y, the periplasmic vitamin B12 binding protein in E.coli
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-10-14
Authors: Mireku, S.A., Ruetz, M., Zhou, T., Korkhov, V.M., Kraeutler, B., Locher, K.P.
PDB entry 5m35: The molecular tweezer CLR01 stabilizes a disordered protein-protein interface
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2016-10-14
Authors: Bier, D., Ottmann, C.
PDB entry 5m36: The molecular tweezer CLR01 stabilizes a disordered protein-protein interface
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2016-10-14
Authors: Bier, D., Ottmann, C.
PDB entry 5m37: The molecular tweezer CLR01 stabilizes a disordered protein-protein interface
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2016-10-14
Authors: Bier, D., Ottmann, C.
PDB entry 5m38: Structure of the TagL peptidoglycan binding domain from EAEC T6SS
Classification: SUGAR BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-10-14
Authors: Cambillau, C., Nguyen, V.S., Spinelli, S., Cascales, E.
PDB entry 5m39: Crystal structure of BRD4 BROMODOMAIN 1 IN COMPLEX WITH LIGAND 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2016-10-14
Authors: Kessler, D., Mayer, M., Engelhardt, H., Wolkerstorfer, B., Geist, L.
PDB entry 5m3a: Crystal structure of BRD4 BROMODOMAIN 1 IN COMPLEX WITH LIGAND 2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-10-14
Authors: Kessler, D., Mayer, M., Engelhardt, H., Wolkerstorfer, B., Geist, L.
PDB entry 5m3b: Structure of cobinamide-bound BtuF mutant W66L, the periplasmic vitamin B12 binding protein in E.coli
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-10-14
Authors: Mireku, S.A., Ruetz, M., Zhou, T., Korkhov, V.M., Kraeutler, B., Locher, K.P.
PDB entry 5m3c: Structure of the hybrid domain (GGDEF-EAL) of PA0575 from Pseudomonas aeruginosa PAO1 at 2.8 Ang. with GTP and Ca2+ bound to the active site of the GGDEF domain
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-10-14
Authors: Giardina, G., Brunotti, P., Cutruzzola, F., Rinaldo, S.
PDB entry 5m3d: Structural tuning of CD81LEL (space group P31)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2016-10-14
Authors: Cunha, E.S., Sfriso, P., Rojas, A.L., Roversi, P., Hospital, A., Orozco, M., Abrescia, N.G.
PDB entry 5m3e: Macrodomain of Thermus aquaticus DarG in complex with ADP-ribose
Classification: ANTITOXIN
Source organism: Thermus aquaticus Y51MC23
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-10-14
Authors: Ariza, A.
PDB entry 5m3f: Yeast RNA polymerase I elongation complex at 3.8A
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae ; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2016-10-14
Authors: Neyer, S., Kunz, M., Geiss, C., Hantsche, M., Hodirnau, V.-V., Seybert, A., Engel, C., Scheffer, M.P., Cramer, P., Frangakis, A.S.
PDB entry 5m3h: Bat influenza A/H17N10 polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTD
Classification: TRANSFERASE
Source organism: Influenza A virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-10-14
Authors: Lukarska, M., Pflug, A., Cusack, S.
PDB entry 5m3i: Macrodomain of Mycobacterium tuberculosis DarG
Classification: ANTITOXIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2016-10-14
Authors: Ariza, A.
PDB entry 5m3j: Influenza B polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTD
Classification: VIRAL PROTEIN
Source organism: Influenza B virus; Influenza B virus (B/Memphis/13/2003); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2016-10-14
Authors: Lukarska, M., Pflug, A., Cusack, S.
PDB entry 5m3k: A multi-component acyltransferase PhlABC from Pseudomonas protegens
Classification: TRANSFERASE
Source organism: Pseudomonas fluorescens; Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2016-10-15
Authors: Pavkov-Keller, T., Schmidt, N.G., Kroutil, W., Gruber, K.
PDB entry 5m3l: Single-particle cryo-EM using alignment by classification (ABC): the structure of Lumbricus terrestris hemoglobin
Classification: OXYGEN TRANSPORT
Source organism: Lumbricus terrestris
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2016-10-15
Authors: Afanasyev, P., Linnemayr-Seer, C., Ravelli, R.B.G., Matadeen, R., De Carlo, S., Alewijnse, B., Portugal, R.V., Pannu, N.S., Schatz, M., van Heel, M.
PDB entry 5m3m: Free monomeric RNA polymerase I at 4.0A resolution
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2016-10-15
Authors: Neyer, S., Kunz, M., Geiss, C., Hantsche, M., Hodirnau, V.-V., Seybert, A., Engel, C., Scheffer, M.P., Cramer, P., Frangakis, A.S.
PDB entry 5m3n: HTRA2 wild-type structure
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.649 Å
Deposited: 2016-10-15
Authors: Merski, M., Pereira, P.J.B., Macedo-Ribeiro, S.
PDB entry 5m3o: HTRA2 A141S mutant structure
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-10-15
Authors: Merski, M., Barbosa Pereira, P.J., Macedo-Ribeiro, S.
PDB entry 5m3q: Crystal structure of Tif6 from Chaetomium thermophilum
Classification: RIBOSOME
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-10-17
Authors: Ahmed, Y.L., Calvino, F.R., Sinning, I.
PDB entry 5m3s: Low-dose fixed target serial synchrotron crystallography structure of Metmyoglobin
Classification: OXYGEN BINDING
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-10-17
Authors: Axford, D., Owen, R.L., Sherrell, D., Muller-Werkmeister, H.
PDB entry 5m3t: Structural tuning of CD81LEL (space group P64)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.021 Å
Deposited: 2016-10-17
Authors: Cunha, E.S., Sfriso, P., Rojas, A.L., Roversi, P., Hospital, A., Orozco, M., Abrescia, N.G.
PDB entry 5m3u: The X-ray structure of human V216F phosphoglycerate kinase 1 mutant
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2016-10-17
Authors: Ilari, A., Fiorillo, A., Cipollone, A., Petrosino, M.
PDB entry 5m3v: BEAT Fc
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2016-10-17
Authors: Skegro, D., Stutz, C., Bourquin, F., Blein, S.
PDB entry 5m3w: Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-1,2-dideoxymannose and alpha-1,2-mannobiose
Classification: HYDROLASE
Source organism: Bacteroides xylanisolvens XB1A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2016-10-17
Authors: Petricevic, M., Sobala, L.F., Fernandes, P.Z., Raich, L., Thompson, A.J., Bernardo-Seisdedos, G., Millet, O., Zhu, S., Sollogoub, M., Rovira, C., Jimenez-Barbero, J., Davies, G.J., Williams, S.J.
PDB entry 5m3x: Crystal structure of human angiotensin I-deleted angiotensinogen
Classification: Serine protease inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2016-10-17
Authors: Yan, Y., Read, R.J.
PDB entry 5m3y: Crystal structure of human glycosylated angiotensinogen
Classification: Serine protease inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-10-17
Authors: Yan, Y., Read, R.J.
PDB entry 5m3z: Crystal structure of Citrobacter freundii methionine gamma-lyase with C115H replacement in the complex with L-norleucine
Classification: LYASE
Source organism: Citrobacter freundii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-10-17
Authors: Revtovich, S.V., Nikulin, A.D., Anufrieva, N.V., Morozova, E.A., Demidkina, T.V.
PDB entry 5m41: Crystal structure of nigritoxine
Classification: TOXIN
Source organism: Vibrio nigripulchritudo
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-10-17
Authors: Czjzek, M., Labreuche, L., Jeudy, A., Le Roux, F.
PDB entry 5m42: Structure of Thermus thermophilus L-proline dehydrogenase lacking alpha helices A, B and C
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-10-18
Authors: Martinez-Julvez, M., Huijbers, M.M.E., van Berkel, W.J.H., Medina, M.
PDB entry 5m43: Crystal structure of Yvh1 phosphatase domain from Chaetomium thermophilum
Classification: RIBOSOME
Source organism: Chaetomium thermophilum var. thermophilum DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 1.646 Å
Deposited: 2016-10-18
Authors: Ahmed, Y.L., Sinning, I.
PDB entry 5m44: Complex structure of human protein kinase CK2 catalytic subunit with a thieno[2,3-d]pyrimidin inhibitor crystallized under high-salt conditions
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2016-10-18
Authors: Niefind, K., Bischoff, N., Yarmoluk, S.M., Bdzhola, V.G., Golub, A.G., Balanda, A.O., Prykhod'ko, A.O.
PDB entry 5m45: Structure of Acetone Carboxylase purified from Xanthobacter autotrophicus
Classification: LIGASE
Source organism: Xanthobacter autotrophicus Py2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2016-10-18
Authors: Kabasakal, B.V., Wells, J.N., Nwaobi, B.C., Eilers, B.J., Peters, J.W., Murray, J.W.
PDB entry 5m46: Alpha-amino epsilon-caprolactam racemase (ACLR) from Rhizobacterium freirei
Classification: ISOMERASE
Source organism: Rhizobium freirei PRF 81
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2016-10-18
Authors: Frese, A., Sutton, P.W., Turkenburg, J.P., Grogan, G.
PDB entry 5m47: Crystal structure of DapF from Corynebacterium glutamicum in complex with D,L-diaminopimelate
Classification: ISOMERASE
Source organism: Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2016-10-18
Authors: Sagong, H.-Y., Kim, K.-J.
PDB entry 5m48: Coiled coil domain of Rtt103p
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.593 Å
Deposited: 2016-10-18
Authors: Jasnovidova, O., Kalynych, S., Plevka, P., Stefl, R.
PDB entry 5m49: Alpha-amino epsilon-caprolactam racemase in complex with PLP and D/L alpha amino epsilon-caprolactam (internal aldimine)
Classification: ISOMERASE
Source organism: Rhizobium freirei PRF 81
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2016-10-18
Authors: Frese, A., Sutton, P.W., Turkenburg, J.P., Grogan, G.
PDB entry 5m4a: Neutral trehalase Nth1 from Saccharomyces cerevisiae in complex with trehalose
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2016-10-18
Authors: Smidova, A., Alblova, M., Obsilova, V., Obsil, T.
PDB entry 5m4b: Alpha-amino epsilon-caprolactam racemase D210A mutant in complex with PLP and geminal diamine intermediate
Classification: ISOMERASE
Source organism: Rhizobacter
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-10-18
Authors: Frese, A., Sutton, P.W., Turkenburg, J.P., Grogan, G.
PDB entry 5m4c: Complex structure of human protein kinase CK2 catalytic subunit with a thieno[2,3-d]pyrimidin inhibitor crystallized under low-salt conditions
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.935 Å
Deposited: 2016-10-18
Authors: Niefind, K., Bischoff, N., Yarmoluk, S.M., Bdzhola, V.G., Golub, A.G., Balanda, A.O., Prykhod'ko, A.O.
PDB entry 5m4d: Alpha-amino epsilon-caprolactam racemase K241A mutant in complex with D-ACL (external aldimine)
Classification: ISOMERASE
Source organism: Rhizobium freirei PRF 81
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2016-10-18
Authors: Frese, A., Sutton, P.W., Turkenburg, J.P., Grogan, G.
PDB entry 5m4e: Application of Off-Rate Screening in the Identification of Novel Pan-Isoform Inhibitors of Pyruvate Dehydrogenase Kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-10-18
Authors: Baker, L.M.
PDB entry 5m4f: Complex structure of human protein kinase CK2 catalytic subunit with the inhibitor 4'-carboxy-6,8-chloro-flavonol (FLC21) crystallized under low-salt conditions
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.519 Å
Deposited: 2016-10-18
Authors: Niefind, K., Bischoff, N., Yarmoluk, S.M., Bdzhola, V.G., Golub, A.G., Balanda, A.O., Prykhod'ko, A.O.
PDB entry 5m4g: Crystal Structure of Wild-Type Human Prolidase with Mn ions
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2016-10-18
Authors: Wilk, P., Weiss, M.S., Mueller, U., Dobbek, H.
PDB entry 5m4h: Application of Off-Rate Screening in the Identification of Novel Pan-Isoform Inhibitors of Pyruvate Dehydrogenase Kinase
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-10-18
Authors: Baker, L.M., Brough, P., Surgenor, A.
PDB entry 5m4i: Complex structure of human protein kinase CK2 catalytic subunit with the inhibitor 4'-carboxy-6,8-chloro-flavonol (FLC21) crystallized under high-salt conditions
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.218 Å
Deposited: 2016-10-18
Authors: Niefind, K., Bischoff, N., Yarmoluk, S.M., Bdzhola, V.G., Golub, A.G., Balanda, A.O., Prykhod'ko, A.O.
PDB entry 5m4j: Crystal Structure of Wild-Type Human Prolidase with GlyPro ligand
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-10-18
Authors: Wilk, P., Weiss, M.S., Mueller, U., Dobbek, H.
PDB entry 5m4k: Application of Off-Rate Screening in the Identification of Novel Pan-Isoform Inhibitors of Pyruvate Dehydrogenase Kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-10-18
Authors: Baker, L.M., Brough, P., Surgenor, A.
PDB entry 5m4l: Crystal Structure of Wild-Type Human Prolidase with Mg ions and LeuPro ligand
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2016-10-18
Authors: Wilk, P., Weiss, M.S., Mueller, U., Dobbek, H.
PDB entry 5m4m: Application of Off-Rate Screening in the Identification of Novel Pan-Isoform Inhibitors of Pyruvate Dehydrogenase Kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-10-18
Authors: Baker, L.M., Brough, P., Surgenor, A.
PDB entry 5m4n: Application of Off-Rate Screening in the Identification of Novel Pan-Isoform Inhibitors of Pyruvate Dehydrogenase Kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-10-18
Authors: Baker, L.M., Brough, P., Surgenor, A.
PDB entry 5m4o: Crystal structure of hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3 in complex with 4-nitrophenol
Classification: OXIDOREDUCTASE
Source organism: Sphingomonas sp. TTNP3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-10-18
Authors: Ferraroni, M., Da Vela, S., Scozzafava, A., Kolvenbach, B., Corvini, P.F.X.
PDB entry 5m4p: Application of Off-Rate Screening in the Identification of Novel Pan-Isoform Inhibitors of Pyruvate Dehydrogenase Kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-10-18
Authors: Baker, L.M., Brough, P., Surgenor, A.
PDB entry 5m4q: Crystal Structure of Wild-Type Human Prolidase with Mn ions and Pro ligand
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2016-10-18
Authors: Wilk, P., Weiss, M.S., Mueller, U., Dobbek, H.
PDB entry 5m4r: Structural tuning of CD81LEL (space group C2)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2016-10-19
Authors: Cunha, E.S., Sfriso, P., Rojas, A.L., Roversi, P., Hospital, A., Orozco, M., Abrescia, N.G.
PDB entry 5m4s: Transcription factor TFIIA as a single chain protein
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2016-10-19
Authors: Kandiah, E., Gupta, K.
PDB entry 5m4t: C-terminal domain structure of VSG M1.1
Classification: MEMBRANE PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: SOLUTION NMR
Deposited: 2016-10-19
Authors: Jones, N.G., Mott, H.R., Carrington, M.
PDB entry 5m4u: ORTHORHOMBIC COMPLEX STRUCTURE OF HUMAN PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA') WITH THE INHIBITOR 4'-CARBOXY-6,8-CHLORO- FLAVONOL (FLC21)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.195 Å
Deposited: 2016-10-19
Authors: Niefind, K., Bischoff, N., Yarmoluk, S.M., Bdzhola, V.G., Golub, A.G., Balanda, A.O., Prykhod'ko, A.O.
PDB entry 5m4v: X-ray structure of the mambaquaretin-1, a selective antagonist of the vasopressin type 2 receptor
Classification: TOXIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2016-10-19
Authors: Stura, E.A., Vera, L., Ciolek, J., Mourier, G., Gilles, N.
PDB entry 5m4w: Structure of DNA AGCGA-quadruplex adopted by 15-mer oligonucleotide found in regulatory region of the PLEKHG3 human gene with G11 to I11 mutation, d(GCGAGGGAGCIAGGG),VK34_I11
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-10-19
Authors: Kocman, V., Plavec, J.
PDB entry 5m4x: Mutant glyceraldehyde dehydrogenase (F34M+Y399C+S405N) from Thermoplasma acidophilum
Classification: OXIDOREDUCTASE
Source organism: Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.56 Å
Deposited: 2016-10-19
Authors: Iermak, I., Mesters, J.R., Kuta Smatanova, I.
PDB entry 5m4y: Crystal structure of the Sec3/Sso2 complex at 2.20 angstrom resolution
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-10-19
Authors: Zhang, Y.B., Dong, G.
PDB entry 5m4z: Crystal structure of the complex of T.spiralis thymidylate synthase with N(4)-hydroxy-2'-deoxycytidine-5'-monophosphate, crystallized in the presence of N(5,10)-methylenetetrahydrofolate
Classification: TRANSFERASE
Source organism: Trichinella spiralis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.179 Å
Deposited: 2016-10-19
Authors: Wilk, P., Maj, P., Jarmula, A., Dowiercial, A., Rode, W.
PDB entry 5m50: Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.3 Å
Deposited: 2016-10-20
Authors: Akhmanova, A., Moores, C.A., Baldus, M., Steinmetz, M.O., Topf, M., Roberts, A.J., Grant, B.J., Scarabelli, G., Joseph, A.-P., van Hooff, J.J.E., Houben, K., Hua, S., Luo, Y., Stangier, M.M., Jiang, K., Atherton, J.
PDB entry 5m51: Nek2 bound to arylaminopurine compound 8
Classification: Transferase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.899 Å
Deposited: 2016-10-20
Authors: Bayliss, R., Yeoh, S.
PDB entry 5m52: Crystal structure of yeast Brr2 full-lenght in complex with Prp8 Jab1 domain
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2016-10-20
Authors: Wollenhaupt, J., Absmeier, E., Becke, C., Santos, K.F., Wahl, M.C.
PDB entry 5m53: Nek2 bound to arylaminopurine inhibitor 11
Classification: Transferase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-10-20
Authors: Bayliss, R., Carr, K.H.
PDB entry 5m54: Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2016-10-20
Authors: Akhmanova, A., Moores, C.A., Baldus, M., Steinmetz, M.O., Topf, M., Roberts, A.J., Grant, B.J., Scarabelli, G., Joseph, A.-J., van Hooff, J.J.E., Houben, K., Hua, S., Luo, Y., Stangier, M.M., Jiang, K., Atherton, J.
PDB entry 5m55: Nek2 bound to arylaminopurine 71
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-10-20
Authors: Bayliss, R.
PDB entry 5m56: Monoclinic complex structure of human protein kinase CK2 catalytic subunit (isoform CK2alpha') with the inhibitor 4'-carboxy-6,8-chloro-flavonol (FLC21)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.237 Å
Deposited: 2016-10-20
Authors: Niefind, K., Bischoff, N., Yarmoluk, S.M., Bdzhola, V.G., Golub, A.G., Balanda, A.O., Prykhod'ko, A.O.
PDB entry 5m57: Nek2 bound to arylaminopurine 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-10-20
Authors: Bayliss, R.
PDB entry 5m58: Crystal structure of CouO, a C-methyltransferase from Streptomyces rishiriensis
Classification: TRANSFERASE
Source organism: Streptomyces rishiriensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2016-10-20
Authors: Pavkov-Keller, T., Gruber, K.
PDB entry 5m59: Crystal structure of Chaetomium thermophilum Brr2 helicase core in complex with Prp8 Jab1 domain
Classification: SPLICING
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2016-10-20
Authors: Absmeier, E., Becke, C., Wollenhaupt, J., Santos, K.F., Wahl, M.C.
PDB entry 5m5a: Crystal structure of MELK in complex with an inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-10-21
Authors: Canevari, G., Re Depaolini, S., Casale, E., Felder, E., Kuster, B., Heinzlmeir, S.
PDB entry 5m5b: Crystal structure of Zika virus NS5 methyltransferase
Classification: TRANSFERASE
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2016-10-21
Authors: Barral, K., Ortiz Lombardia, M., Coutard, B., Decroly, E., Lichiere, J.
PDB entry 5m5c: Mechanism of microtubule minus-end recognition and protection by CAMSAP proteins
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2016-10-21
Authors: Akhmanova, A., Moores, C.A., Baldus, M., Steinmetz, M.O., Topf, M., Roberts, A.J., Grant, B.J., Scarabelli, G., Joseph, A.-P., van Hooff, J.J.E., Houben, K., Hua, S., Luo, Y., Stangier, M.M., Jiang, K., Atherton, J.
PDB entry 5m5d: Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-D-glucal
Classification: HYDROLASE
Source organism: Bacteroides xylanisolvens XB1A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2016-10-21
Authors: Petricevic, M., Sobala, L.F., Fernandes, P.Z., Raich, L., Thompson, A.J., Bernardo-Seisdedos, G., Millet, O., Zhu, S., Sollogoub, M., Rovira, C., Jimenez-Barbero, J., Davies, G.J., Williams, S.J.
PDB entry 5m5e: Crystal structure of a interleukin-2 variant in complex with interleukin-2 receptor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-10-21
Authors: Klein, C., Freimoser-Grundschober, A., Waldhauer, I., Stihle, M., Birk, M., Benz, J.
PDB entry 5m5f: Thermolysin in complex with inhibitor and krypton
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2016-10-21
Authors: Krimmer, S.G., Cramer, J., Heine, A., Klebe, G.
PDB entry 5m5g: Crystal structure of the Chaetomium Thermophilum polycomb repressive complex 2 (PRC2)
Classification: TRANSFERASE
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719); Chaetomium thermophilum var. thermophilum DSM 1495; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2016-10-21
Authors: Zhang, Y., Justin, N., Wilson, J., Gamblin, S.
PDB entry 5m5h: RIBOSOME-BOUND YIDC INSERTASE
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2016-10-21
Authors: Kedrov, A., Wickles, S., Crevenna, A.H., van der Sluis, E., Buschauer, R., Berninghausen, O., Lamb, D.C., Beckmann, R.
PDB entry 5m5i: Pseudo-atomic model of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus conformation allows formation of a cover neck bundle.
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2016-10-21
Authors: Goulet, A., Moores, C.A., Cross, R.A.
PDB entry 5m5j: Thioredoxin reductase from Giardia duodenalis
Classification: OXIDOREDUCTASE
Source organism: Giardia intestinalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2016-10-21
Authors: Fiorillo, A., Ilari, A., Lalle, M.
PDB entry 5m5k: S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenosine and cordycepin
Classification: HYDROLASE
Source organism: Bradyrhizobium elkanii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2016-10-21
Authors: Manszewski, T., Mueller-Dieckamann, J., Jaskolski, M.
PDB entry 5m5l: Pseudo-atomic model of microtubule-bound S. pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus adopts multiple conformations
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2016-10-21
Authors: Goulet, A., Moores, C.A., Cross, R.A.
PDB entry 5m5m: Pseudo-atomic model of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus adopts multiple conformations.
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2016-10-21
Authors: Goulet, A., Moores, C.A., Cross, R.A.
PDB entry 5m5n: Pseudo-atomic model of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus adopts multiple conformations.
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2016-10-22
Authors: Goulet, A., Moores, C.A., Cross, R.A.
PDB entry 5m5o: Pseudo-atomic model of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus adopts multiple conformations.
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2016-10-22
Authors: Goulet, A., Moores, C.A., Cross, R.A.
PDB entry 5m5p: S. cerevisiae spliceosomal helicase Brr2 (271-end) in complex with the Jab/MPN domain of S. cerevisiae Prp8
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.2 Å
Deposited: 2016-10-22
Authors: Becke, C., Absmeier, E., Wollenhaupt, J., Santos, K.F., Wahl, M.C.
PDB entry 5m5q: COPS5(2-257) IN COMPLEX WITH A AZAINDOLE (COMPOUND 4)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-10-22
Authors: Renatus, M., Altmann, E.
PDB entry 5m5r: Clathrin heavy chain N-terminal domain bound to beta2 adaptin clathrin box motif
Classification: ENDOCYTOSIS
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2016-10-22
Authors: Muenzner, J., Graham, S.C.
PDB entry 5m5s: Clathrin heavy chain N-terminal domain bound to amphiphysin clathrin-box motif
Classification: ENDOCYTOSIS
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2016-10-22
Authors: Muenzner, J., Graham, S.C.
PDB entry 5m5t: Clathrin heavy chain N-terminal domain bound to a non-natural clathrin-box motif peptide (Amph4T1)
Classification: ENDOCYTOSIS
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-10-22
Authors: Muenzner, J., Graham, S.C.
PDB entry 5m5u: Clathrin heavy chain N-terminal domain bound to a clathrin-box motif from hepatitis D virus large antigen (clade 1)
Classification: ENDOCYTOSIS
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2016-10-22
Authors: Muenzner, J., Graham, S.C.
PDB entry 5m5v: Clathrin heavy chain N-terminal domain bound to a clathrin-box motif from hepatitis D virus large antigen (clade 2)
Classification: ENDOCYTOSIS
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2016-10-22
Authors: Muenzner, J., Graham, S.C.
PDB entry 5m5w: RNA Polymerase I open complex
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae S288c; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2016-10-23
Authors: Tafur, L., Sadian, Y., Hoffmann, N.A., Jakobi, A.J., Wetzel, R., Hagen, W.J.H., Sachse, C., Muller, C.W.
PDB entry 5m5x: RNA Polymerase I elongation complex 1
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2016-10-23
Authors: Tafur, L., Sadian, Y., Hoffmann, N.A., Jakobi, A.J., Wetzel, R., Hagen, W.J.H., Sachse, C., Muller, C.W.
PDB entry 5m5y: RNA Polymerase I elongation complex 2
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2016-10-23
Authors: Tafur, L., Sadian, Y., Hoffmann, N.A., Jakobi, A.J., Wetzel, R., Hagen, W.J.H., Sachse, C., Muller, C.W.
PDB entry 5m5z: Chaetomium thermophilum beta-1-3-glucanase
Classification: TRANSFERASE
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2016-10-23
Authors: Papageorgiou, A.C., Chen, J., Li, D.
PDB entry 5m60: Chaetomium thermophilum beta-1-3-glucanase
Classification: TRANSFERASE
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-10-23
Authors: Papageorgiou, A.C., Chen, J., Li, D.
PDB entry 5m61: Clathrin heavy chain N-terminal domain bound to an extended amphiphysin clathrin-box motif
Classification: ENDOCYTOSIS
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2016-10-23
Authors: Muenzner, J., Graham, S.C.
PDB entry 5m62: Structure of the Mus musclus Langerin carbohydrate recognition domain in complex with glucose
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-10-24
Authors: Loll, B., Aretz, J., Rademacher, C., Wahl, M.C.
PDB entry 5m63: Crystal structure of group B Streptococcus type III DP2 oligosaccharide bound to Fab NVS-1-19-5
Classification: IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2016-10-24
Authors: Carboni, F., Adamo, R., Veggi, D., Rappuoli, R., Malito, E., Margarit, I.R., Berti, F.
PDB entry 5m64: RNA Polymerase I elongation complex with A49 tandem winged helix domain
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2016-10-24
Authors: Tafur, L., Sadian, Y., Hoffmann, N.A., Jakobi, A.J., Wetzel, R., Hagen, W.J.H., Sachse, C., Muller, C.W.