LiteFold/PDB huggingface dataset:
PDB entry 8wq8: Structure of Saccharolobus solfataricus SegC (SSO0033) protein
Classification: UNKNOWN FUNCTION
Source organism: Saccharolobus solfataricus P2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-10-11
Authors: Yen, C.Y., Lin, M.G., Sun, Y.J., Hsiao, C.D.
PDB entry 8wq9: Crystal structure of dihydropyrimidinase complexed with gamma-aminobutyric acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-10-11
Authors: Huang, Y.H., Huang, C.Y.
PDB entry 8wqa: Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 1)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2023-10-11
Authors: Chen, X., Zhang, K., Xu, C.
PDB entry 8wqb: Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 2)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2023-10-11
Authors: Chen, X., Zhang, K., Xu, C.
PDB entry 8wqc: cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CDK5R1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2023-10-11
Authors: Chen, X., Zhang, K., Xu, C.
PDB entry 8wqd: Local refinement of FEM1B bound with the C-degron of CCC89
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2023-10-11
Authors: Chen, X., Zhang, K., Xu, C.
PDB entry 8wqe: Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CUX1 (conformation 1)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2023-10-11
Authors: Chen, X., Zhang, K., Xu, C.
PDB entry 8wqf: cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CUX1 (conformation 2)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2023-10-11
Authors: Chen, X., Zhang, K., Xu, C.
PDB entry 8wqg: cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 1)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.09 Å
Deposited: 2023-10-11
Authors: Chen, X., Zhang, K., Xu, C.
PDB entry 8wqh: cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 2)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2023-10-11
Authors: Chen, X., Zhang, K., Xu, C.
PDB entry 8wqi: Local refinement of FEM1B bound with the C-degron of CUX1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-11
Authors: Chen, X., Zhang, K., Xu, C.
PDB entry 8wqj: Crystal Structure of Transaminase from Shimia marina
Classification: TRANSFERASE
Source organism: Shimia marina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-10-11
Authors: Heo, Y.S.
PDB entry 8wqk: Crystal structure of the C-terminal domain of PEDV nucleocapsid protein
Classification: VIRAL PROTEIN
Source organism: Porcine epidemic diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2023-10-11
Authors: Zhang, J.T., Jiao, Z., Liang, R., Shi, Y.J., Peng, G.Q.
PDB entry 8wql: In situ PBS-PSII supercomplex from cyanobacterial Spirulina platensis
Classification: PHOTOSYNTHESIS
Source organism: Arthrospira sp. FACHB-439
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-11
Authors: You, X., Zhang, X., Xiao, Y.N., Sun, S., Sui, S.F.
PDB entry 8wqm: Complex structure of AtHPPD with Atovaquone
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.796 Å
Deposited: 2023-10-11
Authors: Yang, G.-F., Lin, H.-Y., Dong, J.
PDB entry 8wqn: Structure of Saccharolobus solfataricus SegC (SSO0033) protein
Classification: UNKNOWN FUNCTION
Source organism: Saccharolobus solfataricus P2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-12
Authors: Yen, C.Y., Lin, M.G., Sun, Y.J., Hsiao, C.D.
PDB entry 8wqo: Crystal structure of BRD4-BD1 bound with DI106
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2023-10-12
Authors: Cao, D., Xiong, B.
PDB entry 8wqp: Cryo-EM structure of T. pseudonana PyShell helical tube
Classification: PLANT PROTEIN
Source organism: Thalassiosira pseudonana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-10-12
Authors: Kawamoto, A., Tohda, R., Gerle, C., Kurisu, G.
PDB entry 8wqq: Proteomics study reveals that ASFV g5Rp protein interacts with eukaryotic translation initiation factor 5A and may regulate host translation
Classification: VIRAL PROTEIN
Source organism: ASFV-like virus WU
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-10-12
Authors: Liang, R.Y., Xu, C.M., Zhao, X.M.
PDB entry 8wqr: Structure of the DDB1-AMBRA1 E3 ligase receptor complex linked to cell cycle regulation
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2023-10-12
Authors: Liu, M., Wang, Y., Su, M.Y., Stjepanovic, G.
PDB entry 8wqt: Cryo-EM Structure of Mouse TLR4/MD-2/DLAM1 complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-10-12
Authors: Fu, Y., Kim, H., Zamyatina, A., Kim, H.M.
PDB entry 8wqu: Fe-O nanocluster of form-IX in the 4-fold channel of Ureaplasma diversum ferritin
Classification: METAL BINDING PROTEIN
Source organism: Ureaplasma diversum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-10-12
Authors: Wang, W.M., Ma, D.Y., Gong, W.J., Wu, L.J., Wang, H.F.
PDB entry 8wqv: Fe-O nanocluster of form-VIII in the 4-fold channel of Ureaplasma diversum ferritin
Classification: METAL BINDING PROTEIN
Source organism: Ureaplasma diversum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-12
Authors: Wang, W.M., Ma, D.Y., Gong, W.J., Wu, L.J., Wang, H.F.
PDB entry 8wqw: Cryo-EM structure of bsAb3 Fab-Gn-Gc complex
Classification: PROTEIN BINDING
Source organism: Dabie bandavirus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2023-10-12
Authors: Wu, Y., Sun, J.Q.
PDB entry 8wqx: Fe-O nanocluster of form-X in the 4-fold channel of Ureaplasma diversum ferritin
Classification: METAL BINDING PROTEIN
Source organism: Ureaplasma diversum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-10-12
Authors: Wang, W.M., Ma, D.Y., Gong, W.J., Wu, L.J., Wang, H.F.
PDB entry 8wqy: Fe-O nanocluster of form-XI in the 4-fold channel of Ureaplasma diversum ferritin
Classification: METAL BINDING PROTEIN
Source organism: Ureaplasma diversum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-12
Authors: Wang, W.M., Ma, D.Y., Gong, W.J., Wu, L.J., Wang, H.F.
PDB entry 8wqz: X-ray Crystal Structure of Pseudoazurin Met16Gly variant
Classification: ELECTRON TRANSPORT
Source organism: Achromobacter cycloclastes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-10-12
Authors: Sugai, A., Yamaguchi, T., Kohzuma, T.
PDB entry 8wr0: Fe-O nanocluster of form-XII in the 4-fold channel of Ureaplasma diversum ferritin
Classification: METAL BINDING PROTEIN
Source organism: Ureaplasma diversum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-12
Authors: Wang, W.M., Ma, D.Y., Gong, W.J., Wu, L.J., Wang, H.F.
PDB entry 8wr2: Crystal Structure of Human Pyridoxal Kinase with bound Luteolin
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-10-12
Authors: Fan, J., Zhu, Y.
PDB entry 8wr3: Cryo-EM structure of lysosomal protein LYCHOS
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-12
Authors: Wang, Z.H., Qian, H.W.
PDB entry 8wr4: Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (non-targeting complex)
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Chryseobacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2023-10-13
Authors: Zhang, S., Lin, S., Liu, J.J.G.
PDB entry 8wr5: The Crystal Structure of Mms2 from Biortus
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-10-13
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Guo, S.
PDB entry 8wr8: The Crystal Structure of cGAS from Biortus
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-10-13
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Guo, S.
PDB entry 8wra: The Crystal Structure of CASP1 from Biortus
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-10-13
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Guo, S.
PDB entry 8wrb: Lysophosphatidylserine receptor GPR34-Gi complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2023-10-13
Authors: Gong, W., Liu, G., Li, X., Wang, Y., Zhang, X.
PDB entry 8wrc: Time-Resolved Ambient Temperature Kineto-Crystallographic Structure of Initiation Factor in Complex with Ribosome
Classification: RIBOSOME
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.59 Å
Deposited: 2023-10-13
Authors: DeMirci, H., Yapici, I.
PDB entry 8wrd: Human VMAT2 in the apo state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-10-13
Authors: Im, D., Iwata, S.
PDB entry 8wre: Human VMAT2 in complex with dopamine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-13
Authors: Im, D., Iwata, S.
PDB entry 8wrf: Crystal structure of MexL
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-10-14
Authors: Wei, Y., Wu, Z.K.
PDB entry 8wrg: Solution structure of the TAD domain (450-504) of human transcriptional coactivator YAP1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-10-14
Authors: Zhang, H., Li, Y.
PDB entry 8wrh: SARS-CoV-2 XBB.1.5.70 in complex with ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2023-10-14
Authors: Feng, L.L., Feng, L.L.
PDB entry 8wrj: glycosyltransferase UGT74AN3
Classification: TRANSFERASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-10-15
Authors: Huang, W., Long, F.
PDB entry 8wrk: glycosyltransferase UGT74AN3
Classification: TRANSFERASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2023-10-15
Authors: Huang, W., Long, F.
PDB entry 8wrl: XBB.1.5 RBD in complex with ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-10-15
Authors: Feng, L.L., Feng, L.L.
PDB entry 8wrm: XBB.1.5 spike protein in complex with ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.34 Å
Deposited: 2023-10-15
Authors: Feng, L.L., Feng, L.L.
PDB entry 8wro: XBB.1.5.10 spike protein in complex with ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-10-15
Authors: Feng, L.L., Feng, L.L.
PDB entry 8wrp: Cryo-EM structure of Cas12-1 with 20 nt complementary heteroduplex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8wrq: Cryo-EM structure of Cas12-1 with 14 nt complementary heteroduplex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-10-16
Authors: Zhang, K., Zhang, X.
PDB entry 8wrr: Cryo-EM structure of Cas12-1 with 10 nt complementary heteroduplex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-16
Authors: Zhang, X., Zhang, K.
PDB entry 8wrs: Cryo-EM structure of Cas12-1 with 5 nt complementary heteroduplex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8wrt: Cryo-EM structure of Cas12-1/crRNA complex
Classification: RNA BINDING PROTEIN
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8wru: Cryo-EM structure of Cas12-2/crRNA/Target DNA complex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8wrv: Cryo-EM mini structure of Cas12-2/crRNA/Target DNA complex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8wrw: Cryo-EM mini structure of Cas12-1-N1/crRNA/Target DNA complex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8wrx: Anti-CRISPR type II-A 28
Classification: IMMUNE SYSTEM
Source organism: Streptococcus phage Javan128
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-10-16
Authors: Kim, G.E., Park, H.H.
PDB entry 8wry: Cryo-EM Structure of Mouse TLR4/MD-2/DLAM3 Complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-10-16
Authors: Fu, Y., Kim, H., Zamyatina, A., Kim, H.M.
PDB entry 8wrz: Cry-EM structure of cannabinoid receptor-beta-arrestin-1 complex
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Phage display vector pTDisp
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-10-16
Authors: Wang, Y.X., Wang, T., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8ws0: Crystal structure of human NEK7 S195D mutant
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2023-10-16
Authors: Bijpuria, S., Athresh, S., Subbiah, R., Mollard, A., Bearss, D.
PDB entry 8ws1: Crystal structure of human NEK7 D161N mutant
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-10-16
Authors: Bijpuria, S., Kanavalli, M., Subbiah, R., Mollard, A., Bearss, D.
PDB entry 8ws2: Crystal Structure of 5'-Deoxy-5'-methylthioadenosine phosphorylase from Aeropyrum pernix complex with 5'-Deoxy-5'-methylthioadenosine
Classification: TRANSFERASE
Source organism: Aeropyrum pernix K1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2023-10-16
Authors: Iizuka, Y., Kikuchi, M., Yamauchi, T., Tsunoda, M.
PDB entry 8ws3: Crystal structure of SARS-CoV-2 Main Protease (Mpro) with covalent inhibitor 5,8-Dihydroxy-1,4-naphthoquinone
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-10-16
Authors: Yang, Y., Wu, D.
PDB entry 8ws4: Crystal structure of the CYP199A4 mutant F182A in complex with 4-methoxybenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2023-10-16
Authors: Jiang, Y., Cong, Z.
PDB entry 8ws5: Cryo-EM structure of Cas12-1-N2/crRNA/Target DNA complex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8ws6: Cryo-EM mini structure of Cas12-1 with 14 nt complementary heteroduplex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8ws7: Cryo-EM mini structure of Cas12-1 with 10 nt complementary heteroduplex
Classification: NA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8ws8: Cryo-EM mini structure of Cas12-1/crRNA/Target DNA complex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2023-10-16
Authors: Kuo, Z., Xi, Z.
PDB entry 8ws9: Cryo-EM mini structure of Cas12-1 with 5 nt complementary heteroduplex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: unclassified sequences
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2023-10-17
Authors: Kuo, Z., Xi, Z.
PDB entry 8wsa: Cryo-EM Structure of Mouse TLR4/MD-2/DLAM5 Complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-17
Authors: Fu, Y., Kim, H., Zamyatina, A., Kim, H.M.
PDB entry 8wsh: Crystal structure of SARS-Cov-2 main protease, pH=4.0
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-17
Authors: Zhou, X.L., Jiang, H.H., Zhang, J., Li, J.
PDB entry 8wsi: Crystal structure of SARS-Cov-2 main protease, pH=6.0
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2023-10-17
Authors: Jiang, H.H., Zhou, X.L., Zhang, J., Li, J.
PDB entry 8wsj: Crystal structure of SARS-Cov-2 main protease, pH=6.5
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2023-10-17
Authors: Jiang, H.H., Zhou, X.L., Zhang, J., Li, J.
PDB entry 8wsk: Crystal structure of SARS-Cov-2 main protease, pH=8.5
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-10-17
Authors: Jiang, H.H., Zhou, X.L., Zhang, J., Li, J.
PDB entry 8wsm: NLRP3 NACHT domain in complex with compound 32
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-10-17
Authors: Akai, S., Orita, T., Adachi, T.
PDB entry 8wsn: Crystal structure of SFTSV Gn and antibody SF1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SFTS virus JS4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-10-17
Authors: Chang, Z., Gao, F., Wu, Y.
PDB entry 8wsp: Crystal structure of SFTSV Gn and antibody SF5
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SFTS virus SD4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2023-10-17
Authors: Chang, Z., Gao, F., Wu, Y.
PDB entry 8wsq: A protective human antibody against respiratory syncytial virus by targeting a prefusion epitope across sites IV and V of the viral fusion glycoprotein.
Classification: ANTIVIRAL PROTEIN/VIRAL PROTEIN
Source organism: Homo sapiens; Respiratory syncytial virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-10-17
Authors: Xu, S.Y., Chai, Y.
PDB entry 8wsr: The structure of LS1_RBD/hACE2 protein
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Bat SARS-like virus BtSY1; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-10-17
Authors: Xu, Z.P., Sun, J.Q.
PDB entry 8wss: Cryo-EM structure of Melanin-Concentrating Hormone Receptor 1 with MCH
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2023-10-17
Authors: Zhao, L., He, Q., Yuan, Q., Gu, Y., Shan, H., Hu, W., Wu, K., Xu, H.E., Zhang, Y., Wu, C.
PDB entry 8wst: Cryo-EM structure of Melanin-Concentrating Hormone Receptor 2 with MCH
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-10-17
Authors: Zhao, L., He, Q., Yuan, Q., Gu, Y., Shan, H., Hu, W., Wu, K., Xu, H.E., Zhang, Y., Wu, C.
PDB entry 8wsu: Crystal structure of SFTSV Gc and antibody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-10-17
Authors: Chang, Z., Gao, F., Wu, Y.
PDB entry 8wsv: Pre-binding structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69) in presence of sub optimal concentration of 4-hydroxy benzoic acid
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli O127:H6 str. E2348/69
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-10-17
Authors: Goswami, A., Raju, R., Kasarla, M., Ullah, S.
PDB entry 8wsw: The Crystal Structure of LIMK2a from Biortus
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-10-17
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Pan, W.
PDB entry 8wt0: The toxin-antitoxin complex Fic-1-AntF is a deAMPylase that regulates the activity of DNA gyrase
Classification: STRUCTURAL PROTEIN
Source organism: Pseudomonas; Pseudomonas bijieensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-10-17
Authors: Chen, F.R., Guo, L.W., Lu, C.H., Jiang, W.J., Luo, Z.Q., Liu, J.F., Zhang, L.Q.
PDB entry 8wt1: Crystal structure of S9 carboxypeptidase from Geobacillus sterothermophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus ATCC 12980
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-17
Authors: Chandravanshi, K., Kumar, A., Sen, C., Singh, R., Bhange, G.B., Makde, R.D.
PDB entry 8wt3: Crystal structure of peptidoglycan DL-endopeptidase CwlO
Classification: HYDROLASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-10-17
Authors: Tandukar, S., Kwon, E., Kim, D.Y.
PDB entry 8wt4: Crystal structure of DL-endopeptidase CwlO complexed with IseA
Classification: HYDROLASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2023-10-17
Authors: Tandukar, S., Kwon, E., Kim, D.Y.
PDB entry 8wt5: Vaccinia Virus J5 ectodomain
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: SOLUTION NMR
Deposited: 2023-10-18
Authors: Carillo, K.J., Tzou, D.L.
PDB entry 8wt6: Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
Classification: RECOMBINATION/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-10-18
Authors: Hiraizumi, M., Yamashita, K., Nishimasu, H.
PDB entry 8wt7: Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange locked state
Classification: RECOMBINATION/RNA/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-18
Authors: Hiraizumi, M., Yamashita, K., Nishimasu, H.
PDB entry 8wt8: Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction intermediate)
Classification: RECOMBINATION/RNA/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-18
Authors: Hiraizumi, M., Yamashita, K., Nishimasu, H.
PDB entry 8wt9: Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction resolution)
Classification: RECOMBINATION/RNA/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-18
Authors: Hiraizumi, M., Yamashita, K., Nishimasu, H.
PDB entry 8wta: Cryo-EM Structure of Human TLR4/MD-2/DLAM3 Complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-18
Authors: Fu, Y., Kim, H., Zamyatina, A., Kim, H.M.
PDB entry 8wtb: Crystal structure of McsA/McsB complex truncated by chymotrypsin
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-10-18
Authors: Arifuzzaman, M., Kwon, E., Kim, D.Y.
PDB entry 8wtc: Crystal structure of McsB kinase domain complexed with McsA.
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-10-18
Authors: Arifuzzaman, M., Kwon, E., Kim, D.Y.
PDB entry 8wtd: XBB.1.5.10 RBD in complex with ACE2
Classification: VIRAL PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2023-10-18
Authors: Feng, L.L., Feng, L.L.
PDB entry 8wte: Crystal structure of TCR in complex with HLA-A*11:01 bound to KRAS-G12V peptide (VVGAVGVGK)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2023-10-18
Authors: Zhang, M.Y., Luo, L.J., Xu, W., Guan, F.H., Wang, X.Y., Zhu, P., Zhang, J.H., Zhou, X.Y., Wang, F., Ye, S.
PDB entry 8wtf: The Crystal Structure of IRAK4 from Biortus
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-18
Authors: Wang, F., Cheng, W., Lv, Z., Meng, Q., Xu, Y.
PDB entry 8wth: Crystal structure of Cas3-HD
Classification: METAL BINDING PROTEIN
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2023-10-18
Authors: Mo, X.
PDB entry 8wti: Crystal structure of the SARS-CoV-2 main protease in complex with 20j
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-10-18
Authors: Zeng, R., Zhao, X., Yang, S.Y., Lei, J.
PDB entry 8wtj: XBB.1.5.70 spike protein in complex with ACE2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.64 Å
Deposited: 2023-10-18
Authors: Feng, L.L., Feng, L.L.
PDB entry 8wtk: Crystal structure of Cas3-DExD+MG
Classification: METAL BINDING PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2023-10-18
Authors: Mo, X.
PDB entry 8wtl: Crystal structure of Cas3-DExD+MG+ATP
Classification: METAL BINDING PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2023-10-18
Authors: Mo, X.
PDB entry 8wtm: Cryo-EM structure of jasmonic acid transporter ABCG16 bound to JA
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2023-10-19
Authors: Huang, X., An, N., Zhang, X., Zhang, P.
PDB entry 8wtn: Cryo-EM structure of jasmonic acid transporter ABCG16 in occluded conformation
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-10-19
Authors: Huang, X., An, N., Zhang, X., Zhang, P.
PDB entry 8wto: Cryo-EM structure of jasmonic acid transporter ABCG16 in outward conformation
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.38 Å
Deposited: 2023-10-19
Authors: Huang, X., An, N., Zhang, X., Zhang, P.
PDB entry 8wtp: Cryo-EM structure of jasmonic acid transporter ABCG16
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2023-10-19
Authors: Huang, X., An, N., Zhang, X., Zhang, P.
PDB entry 8wtq: HUMAN SQUALENE SYNTHASE IN COMPLEX WITH {1-[2-Chloro-5-(2,2-dimethyl-propyl)-13-(2-methoxy-phenyl)-6-oxo-6,7,10,11-tetrahydro-5H,9H,13H-12-oxa-5,8-diaza-benzocycloundecene-8-carbonyl]-piperidin-4-yl}-acetic acid
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-19
Authors: Suzuki, M., Haginoya, N., Suzuki, M., Ishigai, Y., Terayama, K., Kanda, A., Sugita, K.
PDB entry 8wtr: HUMAN SQUALENE SYNTHASE IN COMPLEX WITH (1S,3R)-3-[2-Chloro-5-(2,2-dimethyl-propyl)-13-(2-methoxy-phenyl)-6,8-dioxo-5,6,7,8,10,11-hexahydro-13H-12-oxa-5,9-diaza-benzocycloundecen-9-yl]-cyclohexanecarboxylic acid
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-19
Authors: Suzuki, M., Haginoya, N., Suzuki, M., Ishigai, Y., Terayama, K., Kanda, A., Sugita, K.
PDB entry 8wts: SARS-CoV-2 3CLpro bound to covalent inhibitor
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-10-19
Authors: Peng, J., Sun, D., Ding, X.
PDB entry 8wtu: Cryo-EM structure of noradrenaline transporter in apo state
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-19
Authors: Zhao, Y., Hu, T., Yu, Z.
PDB entry 8wtv: Cryo-EM structure of noradrenaline transporter in complex with noradrenaline
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-19
Authors: Zhao, Y., Hu, T., Yu, Z.
PDB entry 8wtw: Cryo-EM structure of noradrenaline transporter in complex with a x-MrlA analogue
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-10-19
Authors: Zhao, Y., Hu, T., Yu, Z.
PDB entry 8wtx: Cryo-EM structure of noradrenaline transporter in complex with bupropion
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-19
Authors: Zhao, Y., Hu, T., Yu, Z.
PDB entry 8wty: Cryo-EM structure of noradrenaline transporter in complex with ziprasidone
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-10-19
Authors: Zhao, Y., Hu, T., Yu, Z.
PDB entry 8wtz: potassium outward rectifier channel SKOR
Classification: METAL TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-19
Authors: Gao, X., Sun, T., Lu, Y., Jia, Y., Xu, X., Zhang, Y., Fu, P., Yang, G.
PDB entry 8wu0: Crystal structure of lisargine
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-10-19
Authors: Wang, P., Zhu, Z.
PDB entry 8wu1: Cryo-EM structure of CB1-beta-arrestin1 complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-10-19
Authors: Liao, Y., Zhang, H., Shen, Q., Cai, C.
PDB entry 8wu2: Crystal structure of RNA-dependent RNA polymerases from Jingmen tick virus
Classification: VIRAL PROTEIN
Source organism: Amblyomma virus GXTV108v
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-10-20
Authors: Liu, Z., Han, P., Peng, Q., Qi, J.
PDB entry 8wu3: Crystal structure of RNA-dependent RNA polymerases from Alongshan virus
Classification: VIRAL PROTEIN
Source organism: Alongshan virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-10-20
Authors: Liu, Z.Y., Han, P., Peng, Q., Qi, J.X.
PDB entry 8wu4: Cryo-EM structure of native H. thermoluteolus TH-1 GroEL
Classification: CHAPERONE
Source organism: Hydrogenophilus thermoluteolus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-20
Authors: Liao, Z., Gopalasingam, C.C., Kameya, M., Gerle, C., Shigematsu, H., Ishii, M., Arakawa, T., Fushinobu, S.
PDB entry 8wu5: The complex of CAG repeat sequence-specific binding cPIP and dsDNA with A-A mismatch
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-10-20
Authors: Abe, K., Takeda, K., Sugiyama, H.
PDB entry 8wu6: Structure of a Nerylneryl Diphosphate Synthase from Solanum lycopersicum
Classification: BIOSYNTHETIC PROTEIN
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-10-20
Authors: Li, F.R., Wang, Q.L., Pan, X.M., Dong, L.B.
PDB entry 8wu7: Structure of a cis-Geranylfarnesyl Diphosphate Synthase from Streptomyces clavuligerus
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces clavuligerus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2023-10-20
Authors: Li, F.R., Wang, Q.L., Pan, X.M., Dong, L.B.
PDB entry 8wu8: Crystal structure of the human RAD9-RAD1(F64A/M256A/F266A)-HUS1-RHINO(88-99) complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2023-10-20
Authors: Hara, K., Nagata, K., Iida, N., Hashimoto, H.
PDB entry 8wua: cryo-EM structure of human TMEM63A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-10-20
Authors: Yang, D.
PDB entry 8wub: The X-ray structure of human neuroglobin C120S mutant
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-10-20
Authors: Lin, Y.W., Yuan, H.
PDB entry 8wuc: Cryo-EM structure of H. thermoluteolus GroEL-GroES2 football complex
Classification: CHAPERONE
Source organism: Hydrogenophilus thermoluteolus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-10-20
Authors: Liao, Z., Gopalasingam, C.C., Kameya, M., Gerle, C., Shigematsu, H., Ishii, M., Arakawa, T., Fushinobu, S.
PDB entry 8wue: The sigma-1 receptor from Xenopus laevis in complex with dehydroepiandrosterone sulfate by soaking (C2 form)
Classification: MEMBRANE PROTEIN
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.089 Å
Deposited: 2023-10-20
Authors: Fu, C., Sun, Z., Zhou, X.
PDB entry 8wug: The Crystal Structure of JMJD2D from Biortus.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-10-20
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Guo, S.
PDB entry 8wui: SKOR D312N L271P double mutation
Classification: METAL TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-10-20
Authors: Gao, X., Sun, T., Lu, Y., Jia, Y., Xu, X., Zhang, Y., Fu, P., Yang, G.
PDB entry 8wul: Crystal structure of affinity enhanced TCR in complex with HLA-A*11:01 bound to KRAS-G12V peptide (VVGAVGVGK)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2023-10-20
Authors: Zhang, M.Y., Luo, L.J., Xu, W., Guan, F.H., Wang, X.Y., Zhu, P., Zhang, J.H., Zhou, X.Y., Wang, F., Ye, S.
PDB entry 8wup: X-Ray crystal structure of glycoside hydrolase family 6 cellobiohydrolase from Phanerochaete chrysosporium PcCel6A wild-type
Classification: HYDROLASE
Source organism: Phanerodontia chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2023-10-20
Authors: Yamaguchi, S., Sunagawa, N., Tachioka, M., Igarashi, K.
PDB entry 8wur: Crystal structure of SARS-Cov-2 main protease D48N mutant in complex with shikonin
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2023-10-21
Authors: Zhao, Z.Y., Li, W.W., Zhang, J., Li, J.
PDB entry 8wus: SpCas9-MMLV RT-pegRNA-target DNA complex (termination)
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Moloney murine leukemia virus; Streptococcus pyogenes; Streptococcus pyogenes serotype M1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-21
Authors: Shuto, Y., Nakagawa, R., Hoki, M., Omura, S.N., Hirano, H., Itoh, Y., Nureki, O.
PDB entry 8wut: SpCas9-MMLV RT-pegRNA-target DNA complex (initiation)
Classification: RNA BINDING PROTEIN
Source organism: Moloney murine leukemia virus; Streptococcus pyogenes; Streptococcus pyogenes serotype M1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-21
Authors: Shuto, Y., Nakagawa, R., Hoki, M., Omura, S.N., Hirano, H., Itoh, Y., Nureki, O.
PDB entry 8wuu: SpCas9-pegRNA-target DNA complex (pre-initiation)
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Streptococcus pyogenes; Streptococcus pyogenes serotype M1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-10-21
Authors: Shuto, Y., Nakagawa, R., Hoki, M., Omura, S.N., Hirano, H., Itoh, Y., Nureki, O.
PDB entry 8wuv: SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 16-nt)
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Moloney murine leukemia virus; Streptococcus pyogenes; Streptococcus pyogenes serotype M1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-21
Authors: Shuto, Y., Nakagawa, R., Hoki, M., Omura, S.N., Hirano, H., Itoh, Y., Nureki, O.
PDB entry 8wuw: Cryo-EM structure of H. thermophilus GroEL-GroES2 asymmetric football complex
Classification: CHAPERONE
Source organism: Hydrogenobacter thermophilus TK-6
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-10-21
Authors: Liao, Z., Gopalasingam, C.C., Kameya, M., Gerle, C., Shigematsu, H., Ishii, M., Arakawa, T., Fushinobu, S.
PDB entry 8wux: Cryo-EM structure of H. thermophilus GroEL-GroES bullet complex
Classification: CHAPERONE
Source organism: Hydrogenobacter thermophilus TK-6
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-10-21
Authors: Liao, Z., Gopalasingam, C.C., Kameya, M., Gerle, C., Shigematsu, H., Ishii, M., Arakawa, T., Fushinobu, S.
PDB entry 8wuy: Crystal Structure of TR3 LBD in complex with para-positioned 3,4,5-trisubstituted benzene derivatives
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-10-21
Authors: Hong, W.B., Chen, X.Q., Lin, T.W.
PDB entry 8wuz: Development of 2-imino-2,3,5,6,7,8-hexahydropyrido[4,3-d]pyrimidin-4(1H)-one derivatives as human caseinolytic peptidase P (hClpP) activators
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-10-22
Authors: Jiang, J.-X., Ding, H., Chen, M.-R., Lu, M.-L., Sun, H.-Y., Xiao, Y.-B.
PDB entry 8wv0: Outer membrane porin of Burkholderia pseudomallei (BpsOmp38)
Classification: PROTEIN TRANSPORT
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-10-22
Authors: Bunkum, P., Aunkham, A., Bert van den, B., Robinson, R.C., Suginta, W.
PDB entry 8wv1: Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
Classification: RIBOSOME
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.99 Å
Deposited: 2023-10-22
Authors: DeMirci, H., Tosun, B.
PDB entry 8wv2: Crystal structure of urethanase from Candida parapsilosis and structure-based Engineering to improve the catalytic activity and stability
Classification: HYDROLASE
Source organism: Candida parapsilosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2023-10-22
Authors: Zhao, T., Wu, H.
PDB entry 8wv3: NUDIX hydrolase from Bacillus methanolicus
Classification: HYDROLASE
Source organism: Bacillus methanolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-10-23
Authors: Ma, B.D., Kong, X.D.
PDB entry 8wv4: C-reactive protein, pentamer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-23
Authors: Yadav, S., Vinothkumar, K.R.
PDB entry 8wv5: C-reactive protein, decamer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-23
Authors: Yadav, S., Vinothkumar, K.R.
PDB entry 8wv6: PaaZ, bifunctional enzyme
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-10-23
Authors: Yadav, S., Vinothkumar, K.R.
PDB entry 8wv8: Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
Classification: TRANSFERASE
Source organism: Synechococcus elongatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.93 Å
Deposited: 2023-10-23
Authors: Furuike, Y., Akiyama, S.
PDB entry 8wvb: Crystal structure of Lsd18 mutant S195M
Classification: FLAVOPROTEIN
Source organism: Streptomyces lasalocidi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-10-23
Authors: Liu, N., Xiao, H.L., Chen, X.
PDB entry 8wvd: Crystal structure of Glycosyltransferase in complex with UD1
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2023-10-23
Authors: Li, J., Shan, N., Yang, J.G., Liu, W.D., Sun, Y.X.
PDB entry 8wve: Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
Classification: TRANSFERASE
Source organism: Synechococcus elongatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.729 Å
Deposited: 2023-10-23
Authors: Furuike, Y., Akiyama, S.
PDB entry 8wvf: Crystal structure of Lsd18 mutant T189M and S195M
Classification: FLAVOPROTEIN
Source organism: Streptomyces lasalocidi
Experimental method: X-RAY DIFFRACTION
Resolution: 3.757 Å
Deposited: 2023-10-23
Authors: Liu, N., Xiao, H.L., Chen, X.
PDB entry 8wvg: Human VMAT2 in complex with tetrabenazine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2023-10-23
Authors: Im, D., Iwata, S.
PDB entry 8wvr: Complex structure of the azoxy synthase VlmB and its substrate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Kitasatospora setae KM-6054
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-10-24
Authors: Zang, X., Zhou, J.H., Yiling, D., Jingkun, S., Zhijie, Z., Zhuanglin, S., Guiyun, Z.
PDB entry 8wvs: The structure of CPPCXC motif
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2023-10-24
Authors: Fan, S.H., Wu, C.L.
PDB entry 8wvt: Crystal structure of Lsd18 in complex with ligands
Classification: FLAVOPROTEIN
Source organism: Streptomyces lasalocidi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-10-24
Authors: Deng, Y.M., Hu, Y.L., Chen, X.
PDB entry 8wvu: Cryo-EM structure of LGR4 in complex with Rspo1 and RNF43
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2023-10-24
Authors: Chang, Z., Lin, C.
PDB entry 8wvv: Cryo-EM structure of LGR4 in state I
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2023-10-24
Authors: Lin, C., Chang, Z.
PDB entry 8wvw: Cryo-EM structure of LGR4 in state II
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2023-10-24
Authors: Lin, C., Chang, Z.
PDB entry 8wvx: Cryo-EM structure of LGR4 in complex with Norrin(dimer)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2023-10-24
Authors: Lin, C., Chang, Z.
PDB entry 8wvy: Cryo-EM structure of LGR4 in complex with Norrin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-10-24
Authors: Lin, C., Chang, Z.
PDB entry 8wvz: Structure of ADP-Form AsfvPrimPol Hexamer
Classification: DNA BINDING PROTEIN/DNA
Source organism: African swine fever virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2023-10-24
Authors: Shi, T.H., Guo, Y.Y., Yan, R.H.
PDB entry 8ww0: Cyclic peptide with affinity for ICOS
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2023-10-24
Authors: Fan, S.H., Wu, C.L.
PDB entry 8ww1: Cyclic peptide with affinity for HER3
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2023-10-24
Authors: Fan, S.H., Wu, C.L.
PDB entry 8ww2: GPR3/Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-10-24
Authors: He, Y., Xiong, Y.
PDB entry 8ww5: X-Ray crystal structure of glycoside hydrolase family 6 cellobiohydrolase from Phanerochaete chrysosporium PcCel6A C240S
Classification: HYDROLASE
Source organism: Phanerodontia chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2023-10-24
Authors: Yamaguchi, S., Sunagawa, N., Tachioka, M., Igarashi, K.
PDB entry 8ww6: Structure of ATP-rs-Form AsfvPrimPol Hexamer
Classification: DNA BINDING PROTEIN/DNA
Source organism: African swine fever virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2023-10-25
Authors: Shi, T.H., Guo, Y.Y., Yan, R.H.
PDB entry 8ww7: Structure of AMPPNP-Form AsfvPrimPol Dodecamer
Classification: DNA BINDING PROTEIN/DNA
Source organism: African swine fever virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2023-10-25
Authors: Shi, T.H., Guo, Y.Y., Yan, R.H.
PDB entry 8ww8: Structure of Apo-Form AsfvPrimPol Hexamer
Classification: DNA BINDING PROTEIN
Source organism: African swine fever virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.99 Å
Deposited: 2023-10-25
Authors: Shi, T.H., Guo, Y.Y., Yan, R.H.