LiteFold/PDB huggingface dataset:
PDB entry 8p7m: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-30
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7n: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-05-30
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7o: Isopenicillin N synthase in complex with Fe and Aad-Cys-[(S)-1-amino-2-methylpropane-1-sulfonic acid]
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-05-30
Authors: Rabe, P., Schofield, C.J.
PDB entry 8p7p: Isopenicillin N synthase in complex with Fe and Aad-Val-[(R)-1-amino-2-methylpropane-1-sulfonic acid]
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-05-30
Authors: Rabe, P., Schofield, C.J.
PDB entry 8p7q: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-05-30
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7r: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-30
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7s: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-05-31
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7t: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-05-31
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7u: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2023-05-31
Authors: Dym, O., Aggarwal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7v: The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.737 Å
Deposited: 2023-05-31
Authors: Dym, O., Aggawal, N., Ashani, Y., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Sussman, J.L.
PDB entry 8p7w: Structure of 5D3-Fab and nanobody(Nb8)-bound ABCG2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-05-31
Authors: Irobalieva, R.N., Manolaridis, I., Jackson, S.M., Ni, D., Pardon, E., Stahlberg, H., Steyaert, J., Locher, K.P.
PDB entry 8p7x: Mycoplasma pneumoniae 70S ribosome in chloramphenicol-treated cells
Classification: TRANSLATION
Source organism: Mycoplasmoides pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2023-05-31
Authors: Schacherl, M., Xue, L., Spahn, C.M.T., Mahamid, J.
PDB entry 8p7y: Mycoplasma pneumoniae 70S ribosome with second S4 protein on large subunit
Classification: TRANSLATION
Source organism: Mycoplasmoides pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-05-31
Authors: Schacherl, M., Xue, L., Spahn, C.M.T., Mahamid, J.
PDB entry 8p81: Crystal structure of human Cdk12/Cyclin K in complex with inhibitor SR-4835
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2023-05-31
Authors: Anand, K., Schmitz, M., Geyer, M.
PDB entry 8p82: Cryo-EM structure of dimeric UBR5
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-05-31
Authors: Aguirre, J.D., Kater, L., Kempf, G., Cavadini, S., Thoma, N.H.
PDB entry 8p83: Cryo-EM structure of full-length human UBR5 (homotetramer)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2023-05-31
Authors: Aguirre, J.D., Kater, L., Kempf, G., Cavadini, S., Thoma, N.H.
PDB entry 8p84: X-ray structure of Thermoanaerobacterales bacterium monoamine oxidase
Classification: FLAVOPROTEIN
Source organism: Thermoanaerobacterales bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-05-31
Authors: Basile, L., Santema, L.L., Fraaije, M.W., Binda, C.
PDB entry 8p85: 80S yeast ribosome in complex with Fluorolissoclimide
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-08-31
Authors: Terrosu, S., Yusupov, M.
PDB entry 8p86: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 mM MG-132, from an ""old"" crystal.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-31
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p87: Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 mM X77, from an ""old"" crystal.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-05-31
Authors: Costanzi, E., Demitri, N., Storici, P.
PDB entry 8p88: X-ray structure of cardiotoxic light chain H3 in complex to neutralizing nanobody C4
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.022 Å
Deposited: 2023-05-31
Authors: Broggini, L., Ricagno, S.
PDB entry 8p89: X-ray structure of cardiotoxic light chain H3 in complex to neutralizing nanobody B5
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.187 Å
Deposited: 2023-05-31
Authors: Broggini, L., Ricagno, S.
PDB entry 8p8a: Structure of 5D3-Fab and nanobody(Nb17)-bound ABCG2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-05-31
Authors: Irobalieva, R.N., Manolaridis, I., Jackson, S.M., Ni, D., Pardon, E., Stahlberg, H., Steyaert, J., Locher, K.P.
PDB entry 8p8b: Mycoplasma pneumoniae large ribosomal subunit in chloramphenicol-treated cells
Classification: TRANSLATION
Source organism: Mycoplasmoides pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-31
Authors: Schacherl, M., Xue, L., Spahn, C.M.T., Mahamid, J.
PDB entry 8p8c: HUMAN CD38 ECTODOMAIN BOUND TO COMPOUND 9-ADPR ADDUCT
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.653 Å
Deposited: 2023-05-31
Authors: Rangel, V., Zebisch, M., Doyle, K.J., Burli, R.W.
PDB entry 8p8e: Crystal structure of endolysin gp46 from Pseudomonas aeruginosa bacteriophage vB_PaeM_KTN6
Classification: HYDROLASE
Source organism: Bacteriophage sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.391 Å
Deposited: 2023-06-01
Authors: van Raaij, M.J., Sanz-Gaitero, M.
PDB entry 8p8f: Crystal structure of the lipase SpL from Sphingomonas sp. HXN-200 in complex with N-benzyl-picolinamide
Classification: HYDROLASE
Source organism: Sphingomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-06-01
Authors: Mokos, D., Gruber, K., Daniel, B.
PDB entry 8p8g: Nitrogenase MoFe protein from A. vinelandii beta double mutant D353G/D357G
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii DJ
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-06-01
Authors: Maslac, N., Wagner, T.
PDB entry 8p8h: Crystal structure of HHD2 domain of hRTEL1
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-06-01
Authors: Hegde, R.P., Kanade, M., Cortone, G., Graewert, M., Longo, A., Gonzalez, A., Chaves-Arquero, B., Blanco, F.J., Napolitano, L.M.R., Onesti, S.
PDB entry 8p8j: Structure of 5D3-Fab and nanobody(Nb96)-bound ABCG2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2023-06-01
Authors: Irobalieva, R.N., Manolaridis, I., Jackson, S.M., Ni, D., Pardon, E., Stahlberg, H., Steyaert, J., Locher, K.P.
PDB entry 8p8k: Acyl-ACP thioesterase from Lemna paucicostata in complex with a thiazolopyridine
Classification: HYDROLASE
Source organism: Lemna aequinoctialis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-06-01
Authors: Freigang, J.
PDB entry 8p8m: Yeast 60S ribosomal subunit, RPL39 deletion
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2023-06-01
Authors: Rabl, J., Banerjee, A., Boehringer, D., Zavolan, M.
PDB entry 8p8n: Mouse RPL39 integrated into the yeast 60S ribosomal subunit
Classification: RIBOSOME
Source organism: Mus musculus; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.15 Å
Deposited: 2023-06-02
Authors: Rabl, J., Banerjee, A., Boehringer, D., Zavolan, M.
PDB entry 8p8o: M. tuberculosis dUTPase - Stl1-159 (StlNT) complex structure
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2023-06-02
Authors: Benedek, A., Leveles, I., Toth, Z.S., Harmat, V., Vertessy, B.G.
PDB entry 8p8p: Crystal structure of human Histidine Triad Nucleotide-Binding Protein 1 in complex with 5'-O-[(3-Indolyl)-1-Ethyl]Carbamoyl Ethenoadenosine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-06-02
Authors: Dolot, R.M., Dillenburg, M., Wagner, C.R.
PDB entry 8p8q: Recombinant Ym1 crystal structure
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.792 Å
Deposited: 2023-06-02
Authors: Verschueren, K.H.G., Verstraete, K., Heyndrickx, I., Aegerter, H., Smole, U., Savvides, S.N., Lambrecht, B.N.
PDB entry 8p8r: Ex vivo Ym1 crystal structure
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-06-02
Authors: Verschueren, K.H.G., Verstraete, K., Heyndrickx, I., Smole, U., Aegerter, H., Savvides, S.N., Lambrecht, B.N.
PDB entry 8p8s: Recombinant Ym2 crystal structure
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2023-06-02
Authors: Verschueren, K.H.G., Verstraete, K., Heyndrickx, I., Smole, U., Aegerter, A., Savvides, S.N., Lambrecht, B.N.
PDB entry 8p8t: Ex vivo Ym2 crystal structure
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2023-06-02
Authors: Verschueren, K.H.G., Verstraete, K., Heyndrickx, I., Smole, U., Aegerter, H., Savvides, S.N., Lambrecht, B.N.
PDB entry 8p8u: Yeast 60S ribosomal subunit
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.23 Å
Deposited: 2023-06-02
Authors: Rabl, J., Banerjee, A., Boehringer, D., Zavolan, M.
PDB entry 8p8v: Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (leading 70S)
Classification: TRANSLATION
Source organism: Mycoplasmoides pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.7 Å
Deposited: 2023-06-02
Authors: Schacherl, M., Xue, L., Spahn, C.M.T., Mahamid, J.
PDB entry 8p8w: Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (following 70S)
Classification: TRANSLATION
Source organism: Mycoplasmoides pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.7 Å
Deposited: 2023-06-02
Authors: Schacherl, M., Xue, L., Spahn, C.M.T., Mahamid, J.
PDB entry 8p8x: Crystal structure of a pathogenic mutant variant of human mitochodnrial PheRS
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2023-06-03
Authors: Chen, W., Kuhle, B.
PDB entry 8p8y: Crystal structure of the metallo-beta-lactamase VIM1 with 1657
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2023-06-04
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8p8z: Crystal structure of the metallo-beta-lactamase VIM1 with 1963
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-06-04
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8p90: TARGET COMPLEX 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-06-05
Authors: Garau, G.
PDB entry 8p91: Hfq from Chromobacterium haemolyticum; a P6 space group monomer
Classification: RNA BINDING PROTEIN
Source organism: Chromobacterium haemolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-06-05
Authors: Nikulin, A.D., Lekontseva, N.V.
PDB entry 8p92: Crystal structure of the metallo-beta-lactamase VIM1 with 2117
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2023-06-05
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8p93: Crystal structure of the metallo-beta-lactamase VIM1 with 2163
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2023-06-05
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8p94: Cryo-EM structure of cortactin stabilized Arp2/3-complex nucleated actin branches
Classification: CONTRACTILE PROTEIN
Source organism: Amanita phalloides; Homo sapiens; Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-06-05
Authors: Liu, T., Moores, C.A.
PDB entry 8p95: Crystal structure of the metallo-beta-lactamase VIM1 with 2407
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2023-06-05
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8p96: TARGET COMPLEX 3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2023-06-05
Authors: Garau, G.
PDB entry 8p97: BtuB3G3 bound to cyanocobalamin with disordered EL8
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2023-06-05
Authors: Silale, A., Abellon-Ruiz, J., van den Berg, B.
PDB entry 8p98: BtuB3G3 bound to cyanocobalamin with ordered EL8
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2023-06-05
Authors: Silale, A., Abellon-Ruiz, J., van den Berg, B.
PDB entry 8p99: SARS-CoV-2 S-protein:D614G mutant in 1-up conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-06-05
Authors: Adhav, A., Forcada-Nadal, A., Marco-Marin, C., Lopez-Redondo, M.L., Llacer, J.L.
PDB entry 8p9a: 80S yeast ribosome in complex with Methyllissoclimide
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-06-05
Authors: Terrosu, S., Yusupov, M., Vanderwal, C.
PDB entry 8p9b: Crystal Structure of Mnk2-D228G in complex with Tinodasertib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2023-06-05
Authors: Turnbull, A.P., Sabin, V., Bell, C., Watson, M.
PDB entry 8p9c: Crystal structure of p63-p73 heterotetramer (tetramerisation domain) in complex with darpin 1810 F11
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-06-05
Authors: Chaikuad, A., Strubel, A., Doetsch, V., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8p9d: Crystal structure of p63-p73 heterotetramer (tetramerisation domain) in complex with darpin 1810 A2
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-06-05
Authors: Chaikuad, A., Strubel, A., Doetsch, V., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8p9e: Crystal structure of wild type p63-p73 heterotetramer (tetramerisation domain) in complex with darpin 1810 F11
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-06-05
Authors: Chaikuad, A., Strubel, A., Doetsch, V., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8p9f: Crystal structure of the first bromodomain of human BRD4 in complex with the dual BET/HDAC inhibitor NB161
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-06-06
Authors: Balourdas, D.I., Bauer, N., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8p9g: Crystal structure of the first bromodomain of human BRD4 in complex with the dual BET/HDAC inhibitor NB390
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-06-06
Authors: Balourdas, D.I., Bauer, N., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8p9h: Crystal structure of the first bromodomain of human BRD4 in complex with the dual BET/HDAC inhibitor NB437
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2023-06-06
Authors: Balourdas, D.I., Bauer, N., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8p9i: Crystal structure of the first bromodomain of human BRD4 in complex with the dual BET/HDAC inhibitor NB462
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2023-06-06
Authors: Balourdas, D.I., Bauer, N., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8p9j: Crystal structure of the first bromodomain of human BRD4 in complex with the dual BET/HDAC inhibitor NB500
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-06-06
Authors: Balourdas, D.I., Bauer, N., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8p9k: Crystal structure of the first bromodomain of human BRD4 in complex with the dual BET/HDAC inhibitor NB503
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-06-06
Authors: Balourdas, D.I., Bauer, N., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8p9l: Crystal structure of the first bromodomain of human BRD4 in complex with the dual BET/HDAC inhibitor NB512
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2023-06-06
Authors: Balourdas, D.I., Bauer, N., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8p9m: Hexameric Hfq from Chromobacterium haemolyticum
Classification: RNA BINDING PROTEIN
Source organism: Chromobacterium haemolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-06-06
Authors: Nikulin, A.D., Lekontseva, N.V.
PDB entry 8p9o: PCNA from Chaetomium thermophilum in complex with PolD3 peptide
Classification: REPLICATION
Source organism: Thermochaetoides thermophila DSM 1495; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-06-06
Authors: Alphey, M.S., Wolford, C.B., MacNeill, S.A.
PDB entry 8p9p: Crystal structure of the metallo-beta-lactamase VIM1 with 2408
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2023-06-06
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8p9q: Crystal structure of the metallo-beta-lactamase VIM1 with 2455
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2023-06-06
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8p9r: Structure of the periplasmic domain of ExbD from E. coli in complex with TonB
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2023-06-06
Authors: Zinke, M., Mechaly, A., Lejeune, M., Haouz, A., Izadi-Pruneyre, N.
PDB entry 8p9s: Crystal structure of the metallo-beta-lactamase VIM1 with 2482
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-06-06
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8p9t: Crystal structure of the metallo-beta-lactamase VIM1 with 2483
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-06-06
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8p9u: Crystal Structure of Two-Domain Laccase mutant M199A/D268N from Streptomyces griseoflavus
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-06-06
Authors: Kolyadenko, I.A., Tishchenko, S.V., Gabdulkhakov, A.G.
PDB entry 8p9v: Crystal Structure of Two-Domain Laccase mutant M199G/R240H/D268N from Streptomyces griseoflavus
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-06-06
Authors: Kolyadenko, I.A., Tishchenko, S.V., Gabdulkhakov, A.G.
PDB entry 8p9w: vitamin D receptor complex with Xe4MeCF3 analog
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-06-06
Authors: Belorusova, A.Y., Rochel, N.
PDB entry 8p9x: Vitamin D receptor complex with Xe4Me agonist ligand
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-06-06
Authors: Rochel, N.
PDB entry 8p9y: SARS-CoV-2 S protein S:D614G mutant in 3-down with binding site of an entry inhibitor
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-06-06
Authors: Adhav, A., Forcada-Nadal, A., Marco-Marin, C., Lopez-Redondo, M.L., Llacer, J.L.
PDB entry 8pa0: cvHsp (HspB7) C131S alpha-crystallin domain - filamin C (FLNC) domain 24 complex
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-06-06
Authors: Wang, Z., Benesch, J.L.P., Allison, T.M., Song, H., McDonough, M.A., Brem, J., Rabe, P.
PDB entry 8pa1: Crystal structure of alcohol dehydrogenase/ketoreductase variant from Thermus thermophilus apo form
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-06-07
Authors: Rozeboom, H.J., Janssen, D.B.
PDB entry 8pa2: Crystal structure of alcohol dehydrogenase/ketoreductase variant from Thermus thermophilus apo form
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-06-07
Authors: Rozeboom, H.J., Janssen, D.B.
PDB entry 8pa3: Crystal structure of the metallo-beta-lactamase VIM1 with 2500
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2023-06-07
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pa4: Crystal structure of the metallo-beta-lactamase VIM1 with 2526
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2023-06-07
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pa5: Crystal structure of the metallo-beta-lactamase VIM1 with 2540
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-06-07
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pa6: Crystal structure of human Histidine Triad Nucleotide-Binding Protein 1 in complex with 5'-O-[(3-Indolyl)-1-Ethyl]Carbamoyl 2-aminoethenoadenosine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2023-06-07
Authors: Dolot, R.M., Dillenburg, M., Wagner, C.R.
PDB entry 8pa7: Crystal structure of the metallo-beta-lactamase VIM1 with 2546
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-06-07
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pa8: Crystal structure of the metallo-beta-lactamase VIM1 with 2551
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2023-06-07
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pa9: Crystal structure of human Histidine Triad Nucleotide-Binding Protein 1 in complex with 5'-O-[(3-Indolyl)-1-Ethyl]Carbamoyl N2-methyl-2-aminoethenoadenosine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-06-07
Authors: Dolot, R.M., Dillenburg, M., Wagner, C.R.
PDB entry 8paa: Crystal structure of the metallo-beta-lactamase VIM1 with 2552
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-06-07
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pab: Structures of the ectodomains of Atypical porcine pestivirus solved by long wavelength sulphur SAD
Classification: VIRAL PROTEIN
Source organism: Atypical porcine pestivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-06-07
Authors: Aitkenhead, H., Stuart, D.I., El Omari, K.
PDB entry 8pac: Crystal structure of the metallo-beta-lactamase VIM1 with 2553
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-06-07
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pad: Crystal structure of the metallo-beta-lactamase VIM1 with 2555
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-06-07
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pae: Structure of the ectodomain of Atypical Porcine Pestivirus E2 at 1.2A resolution
Classification: VIRAL PROTEIN
Source organism: Atypical porcine pestivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-06-07
Authors: Aitkenhead, H., Stuart, D.I., EL Omari, K.
PDB entry 8paf: Crystal structure of human Histidine Triad Nucleotide-Binding Protein 1 in complex with 5'-O-[N-(3-Indolepropionic acid)sulfamoyl] 2-aminoethenoadenosine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-06-07
Authors: Dolot, R.M., Dillenburg, M., Wagner, C.R.
PDB entry 8pag: Crystal structure of the ectodomain of Norway rat pestivirus E2 glycoprotein
Classification: VIRAL PROTEIN
Source organism: Norway rat pestivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-06-07
Authors: Aitkenhead, H., Stuart, D.I., EL Omari, K.
PDB entry 8pah: Crystal structure of the metallo-beta-lactamase VIM1 with 2596
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-06-07
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pai: Crystal structure of human Histidine Triad Nucleotide-Binding Protein 1 in complex with 5'-O-[N-(3-Indolepropionic acid)sulfamoyl] N2-methyl-2-aminoethenoadenosine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-06-07
Authors: Dolot, R.M., Dillenburg, M., Wagner, C.R.
PDB entry 8paj: Crystal Structure of a Squalene-Hopene cyclase from Archangium gephyra
Classification: UNKNOWN FUNCTION
Source organism: Archangium gephyra
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2023-06-08
Authors: Worthy, H.L., Isupov, M.N., Littlechild, J.A., Mitchell, D.E.
PDB entry 8pak: Crystal Structure of a Squalene-Hopene Cyclase from Cystobacter fuscus
Classification: UNKNOWN FUNCTION
Source organism: Cystobacter fuscus DSM 2262
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-06-08
Authors: Worthy, H.L., Mitchell, D.E., Isupov, M.N., Littlechild, J.A.
PDB entry 8pal: Crystal structure of the metallo-beta-lactamase VIM1 with 2651
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-06-08
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pam: Crystal structure of the metallo-beta-lactamase VIM1 with 2652
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-06-08
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pan: Crystal structure of the metallo-beta-lactamase VIM1 with 2653
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-06-08
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pao: Crystal structure of the metallo-beta-lactamase VIM1 with 2654
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-06-08
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8paq: Structure of the small subunit of the laccase-like Nlac protein from Pleurotus eryngii
Classification: OXIDOREDUCTASE
Source organism: Pleurotus eryngii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-06-08
Authors: Medrano, F.J., Camarero, S.
PDB entry 8par: Crystal structure of human MAP4K1 with an inhibitor, BAY-405
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-06-08
Authors: Schaefer, M.
PDB entry 8pas: Crystal structure of MAP4K1 with a SMOL inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-06-08
Authors: Friberg, A.
PDB entry 8pat: Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 3.
Classification: REPLICATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-06-08
Authors: Compain, G., Monsarrat, C., Blagojevic, J., Brillet, K., Dumas, P., Hammann, P., Kuhn, L., Martiel, I., Engilberge, S., Olieric, V., Wolff, P., Burnouf, D., Guichard, G.
PDB entry 8pau: Crystal structure of MAP4K1 with a SMOL inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-06-08
Authors: Friberg, A.
PDB entry 8pav: Crystal structure of MST1 with a MAP4K1 SMOL inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-06-08
Authors: Friberg, A.
PDB entry 8paw: Crystal structure of MST1 with a MAP4K1 SMOL inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-06-08
Authors: Friberg, A.
PDB entry 8pay: Structure of the E.coli DNA polymerase sliding clamp with a covalently bound peptide 2.
Classification: REPLICATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2023-06-08
Authors: Compain, G., Monsarrat, C., Blagojevic, J., Brillet, K., Dumas, P., Hammann, P., Kuhn, L., Martiel, I., Engilberge, S., Olieric, V., Wolff, P., Burnouf, D., wagner, J., Guichard, G.
PDB entry 8paz: OXIDIZED NATIVE PSEUDOAZURIN FROM A. FAECALIS
Classification: ELECTRON TRANSFER
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 1997-02-24
Authors: Adman, E.T., Libeu, C.A.P.
PDB entry 8pb0: Crystal structure of the metallo-beta-lactamase VIM1 with 2696
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2023-06-08
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pb1: Cryo-EM structure of a pre-dimerized murine IL-12 complete extracellular signaling complex (Class 1), obtained after local refinement.
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-06-08
Authors: Felix, J., Bloch, Y., Savvides, S.N.
PDB entry 8pb2: Crystal structure of the metallo-beta-lactamase VIM1 with 2697
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-06-08
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pb3: PsiM in complex with SAH and norbaeocystin, monoclinic crystal form
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2023-06-08
Authors: Werten, S., Hudspeth, J., Rupp, B.
PDB entry 8pb4: PsiM in complex with SAH and norbaeocystin, orthorhombic crystal form
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.91 Å
Deposited: 2023-06-08
Authors: Werten, S., Hudspeth, J., Rupp, B.
PDB entry 8pb5: PsiM in complex with sinefungin and norbaeocystin
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.89 Å
Deposited: 2023-06-08
Authors: Werten, S., Hudspeth, J., Rupp, B.
PDB entry 8pb6: PsiM in complex with SAH and baeocystin
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2023-06-08
Authors: Werten, S., Hudspeth, J., Rupp, B.
PDB entry 8pb7: PsiM in complex with sinefungin and baeocystin
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.92 Å
Deposited: 2023-06-08
Authors: Werten, S., Hudspeth, J., Rupp, B.
PDB entry 8pb8: PsiM in complex with SAH
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.531 Å
Deposited: 2023-06-08
Authors: Werten, S., Hudspeth, J., Rupp, B.
PDB entry 8pb9: Cryo-EM structure of the c-di-GMP-bound FleQ-FleN master regulator complex from Pseudomonas aeruginosa
Classification: GENE REGULATION
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-06-08
Authors: Torres-Sanchez, L.T., Krasteva, P.V.
PDB entry 8pba: Cryo-EM structure of Caenorhabditis elegans DPF-3 (apo)
Classification: HYDROLASE
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-06-08
Authors: Gudipati, R.K., Cavadini, S., Kempf, G., Grosshans, H.
PDB entry 8pbb: CHAPSO treated partial catalytic component (comprising only AnfD & AnfK, lacking AnfG and FeFeco) of iron nitrogenase from Rhodobacter capsulatus
Classification: OXIDOREDUCTASE
Source organism: Rhodobacter capsulatus SB 1003
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2023-06-09
Authors: Schmidt, F.V., Schulz, L., Zarzycki, J., Prinz, S., Erb, T.J., Rebelein, J.G.
PDB entry 8pbc: RAD51 filament on ssDNA bound by the BRCA2 c-terminus
Classification: RECOMBINATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2023-06-09
Authors: Appleby, R., Pellegrini, L.
PDB entry 8pbd: RAD51 filament on dsDNA bound by the BRCA2 c-terminus
Classification: RECOMBINATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-06-09
Authors: Appleby, R., Pellegrini, L.
PDB entry 8pbe: Mutant K1556T of the dihydroorotase domain of human CAD protein bound to the substrate carbamoyl aspartate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbf: Galectin-3C in complex with a triazolesulfane derivative
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2023-06-09
Authors: Kumar, R., Mahanti, M.
PDB entry 8pbg: Mutant K1556T of the dihydroorotase domain of human CAD protein bound to the inhibitor fluoroorotate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbh: Mutant R1617Q of the dihydroorotase domain of human CAD protein bound to the substrate carbamoyl aspartate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbi: Mutant R1617Q of the dihydroorotase domain of human CAD protein bound to the inhibitor fluoroorotate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbj: Mutant R1722W of the dihydroorotase domain of human CAD protein bound to the substrate carbamoyl aspartate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbk: Mutant R1722W of the dihydroorotase domain of human CAD protein bound to the inhibitor fluoorotate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbl: E. coli RNA polymerase elongation complex stalled at thymine dimer lesion
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-06-09
Authors: Woodgate, J., Zenkin, N.
PDB entry 8pbm: Mutant R1789Q of the dihydroorotase domain of human CAD protein bound to the substrate dihydroorotate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbn: Mutant R1789Q of the dihydroorotase domain of human CAD protein bound to the inhibitor fluoorotate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbo: Deep interactome learning for generative drug design
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-06-09
Authors: Hakansson, M., Focht, D., Atz, K., Schneider, G.
PDB entry 8pbp: Mutant R1785C of the dihydroorotase domain of human CAD protein bound to the substrate carbamoyl aspartate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbq: Mutant R1810Q of the dihydroorotase domain of human CAD protein bound to the substrates
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbr: Mutant R1475Q of the dihydroorotase domain of human CAD protein in apo form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbs: Mutant K1482M of the dihydroorotase domain of human CAD protein in apo form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbt: Mutant K1482M of the dihydroorotase domain of human CAD protein bound to the substrate dihydroorotate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbu: Mutant K1482M of the dihydroorotase domain of human CAD protein bound to the inhibitor fluoorotate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2023-06-09
Authors: del Cano-Ochoa, F., Ramon-Maiques, S.
PDB entry 8pbv: Solution NMR structure of D. melanogaster TotA
Classification: UNKNOWN FUNCTION
Source organism: Drosophila melanogaster
Experimental method: SOLUTION NMR
Deposited: 2023-06-09
Authors: Abriata, L.A.
PDB entry 8pbw: Histidine-containing phosphotransfer protein from Chaetomium thermophilum
Classification: TRANSFERASE
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-06-09
Authors: Paredes-Martinez, F., Casino, P.
PDB entry 8pbx: Single particle cryo-EM of the P140-P110 heterodimer of Mycoplasma genitalium at 3.3 Angstrom resolution.
Classification: CELL ADHESION
Source organism: Mycoplasmoides genitalium G37
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-06-09
Authors: Sprankel, L., Scheffer, M.P., Frangakis, A.S.
PDB entry 8pby: Single particle cryo-EM of the P140-P110 heterodimer with an alternative conformation in the P140 stalk of Mycoplasma genitalium at a resolution of 3.7 Angstrom.
Classification: CELL ADHESION
Source organism: Mycoplasmoides genitalium G37
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-06-09
Authors: Sprankel, L., Scheffer, M.P., Frangakis, A.S.
PDB entry 8pbz: Sub-tomogram average of the Nap adhesion complex from the human pathogen Mycoplasma genitalium at 11 Angstrom.
Classification: CELL ADHESION
Source organism: Mycoplasmoides genitalium G37
Experimental method: ELECTRON MICROSCOPY
Resolution: 11 Å
Deposited: 2023-06-09
Authors: Sprankel, L., Scheffer, M.P., Frangakis, A.F.
PDB entry 8pc0: Sub-tomogram average of the open conformation of the Nap adhesion complex from the human pathogen Mycoplasma genitalium.
Classification: CELL ADHESION
Source organism: Mycoplasmoides genitalium G37
Experimental method: ELECTRON MICROSCOPY
Resolution: 17 Å
Deposited: 2023-06-09
Authors: Sprankel, L., Scheffer, M.P., Frangakis, A.F.
PDB entry 8pc1: Sub-tomogram average of the closed conformation of the Nap adhesion complex from the human pathogen Mycoplasma genitalium.
Classification: CELL ADHESION
Source organism: Mycoplasmoides genitalium G37
Experimental method: ELECTRON MICROSCOPY
Resolution: 18 Å
Deposited: 2023-06-09
Authors: Sprankel, L., Scheffer, M.P., Frangakis, A.S.
PDB entry 8pc2: SelDeg51 in complex with FKBP51FK1 domain and pVHL:EloB:EloC
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-06-09
Authors: Meyners, C., Walz, M., Geiger, T.M., Hausch, F.
PDB entry 8pc3: Crystal structure of Paradendryphiella salina PL7C alginate lyase in complex with pentamannuronic acid
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-06-09
Authors: Wilknes, C.
PDB entry 8pc4: MEMBRANE TARGET COMPLEX 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-06-09
Authors: Garau, G.
PDB entry 8pc5: H3K36me3 nucleosome-LEDGF/p75 PWWP domain complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2023-06-09
Authors: Koutna, E., Kouba, T., Veverka, V.
PDB entry 8pc6: H3K36me3 nucleosome-LEDGF/p75 PWWP domain complex - pose 2
Classification: TRANSCRIPTION
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-06-09
Authors: Koutna, E., Kouba, T., Veverka, V.