LiteFold/PDB huggingface dataset:
PDB entry 9mcv: Plant chloroplast dicarboxylate transporter AtDiT2.1 bound with malate
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2025-03-17
Authors: Yang, Z., Zhang, P.
PDB entry 9mcw: OLE RNA dimer (Clostridium acetobutylicum)
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-05
Authors: Kretsch, R.C., Wu, Y., Das, R., Chiu, W.
PDB entry 9mcx: CRYSTAL STRUCTURE OF HUMAN IGG1 FC FRAGMENT-FC-GAMMA RECEPTOR IIA COMPLEX H131 VARIANT
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2024-12-05
Authors: Tolbert, W.D., Pazgier, M.
PDB entry 9mcy: CRYSTAL STRUCTURE OF HUMAN IGG1 FC FRAGMENT-FC-GAMMA RECEPTOR IIA COMPLEX R131 VARIANT
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-12-05
Authors: Tolbert, W.D., Pazgier, M.
PDB entry 9mcz: Crystal structure of the transpeptidase domain of PBP2 from the Neisseria gonorrhoeae cephalosporin decreased susceptibility strain 35/02 in complex with boronate inhibitor VNRX-6884
Classification: LIGASE
Source organism: Neisseria gonorrhoeae 35/02
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-12-05
Authors: Stratton, C.M., Bala, S., Davies, C.
PDB entry 9md0: Crystal structure of the transpeptidase domain of PBP2 from the Neisseria gonorrhoeae cephalosporin decreased susceptibility strain 35/02 in complex with boronate inhibitor VNRX-6752
Classification: LIGASE
Source organism: Neisseria gonorrhoeae 35/02
Experimental method: X-RAY DIFFRACTION
Resolution: 2.613 Å
Deposited: 2024-12-05
Authors: Stratton, C.M., Bala, S., Davies, C.
PDB entry 9md1: Buspirone-bound serotonin 1A (5-HT1A) receptor-Gz protein complex
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2024-12-05
Authors: Warren, A.L., Zilberg, G., Wacker, D.
PDB entry 9md2: Neuraminidase in complex with mAb 5-6
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-12-05
Authors: Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.
PDB entry 9md3: Neuraminidase in complex with mAb 5-12
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-05
Authors: Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.
PDB entry 9md4: Neuraminidase complexed with mAb 5-16
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-12-05
Authors: Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.
PDB entry 9md5: Neuraminidase in complex with mAb 6-23.2
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-05
Authors: Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.
PDB entry 9md6: Neuraminidase in complex with mAb 6-23.1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-12-05
Authors: Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.
PDB entry 9md7: Hip1 complex with inhibitor #1 (Hip1-1) via Ser228
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2024-12-05
Authors: Yim, M.K., Olsen, K.J., Brooks, C.L., Pena, K.J., Johnson, S.J., Goldfarb, N.E.
PDB entry 9md8: Hip1 complex with inhibitor #2 (Hip1-2) via Ser228
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-12-05
Authors: Yim, M.K., Schumann, N.C., Goldfarb, N.E., Johnson, S.J.
PDB entry 9md9: Photoactivation in Bacteriophytochromes; 3ps TR-SFX structure
Classification: SIGNALING PROTEIN
Source organism: Stigmatella aurantiaca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-12-05
Authors: Schmidt, M., Malla, T.
PDB entry 9mda: Conformational flexibility in HLA-B8: peptide tuning structural and dynamical changes
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-12-05
Authors: Li, L., Bouvier, M.
PDB entry 9mdb: Co-MAHF-9 A8V Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.81 Å
Deposited: 2024-12-05
Authors: Richardson-Matthews, R.M.
PDB entry 9mdc: Crystal Structure of human cyclic GMP-AMP synthase (cGAS) in complex with compound 36; (S)-(6,7-dichloro-1-methyl-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl)(5-(2-hydroxyethoxy)pyrimidin-2-yl)methanone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-12-05
Authors: Sietsema, D.V.
PDB entry 9mdd: Crystal Structure of human cyclic GMP-AMP synthase (cGAS) in complex with compound 23; (S)-1-(6,7-dichloro-1-methyl-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl)-2-methoxyethan-1-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-12-05
Authors: Sietsema, D.V.
PDB entry 9mde: Crystal structure of Human Prostaglandin reductase 1 (PTGR1) in complex with NADP
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mdf: Crystal structure of Human Prostaglandin reductase 1 (PTGR1) in complex with NADP and Indomethacin
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mdg: Co-MAHF-9 A8L Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2024-12-05
Authors: Richardson-Matthews, R.M.
PDB entry 9mdh: Crystal structure of Human Prostaglandin reductase 1 (PTGR1) in complex with NADP and Indomethacin (Orthorhombic P form)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mdi: Clostridioides difficile Transferase B Component Dimer
Classification: TOXIN
Source organism: Clostridioides difficile R20291
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2024-12-05
Authors: Sheedlo, M.J., Mullard, R.M.
PDB entry 9mdj: Clostridioides difficile Transferase B Component Dimer in Complex with the A Component
Classification: TOXIN
Source organism: Clostridioides difficile R20291
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.17 Å
Deposited: 2024-12-05
Authors: Sheedlo, M.J., Mullard, R.M.
PDB entry 9mdk: Crystal Structure of E64-inhibited C0362 (TDE_0362 [TDE0362] resi 205-647)
Classification: HYDROLASE
Source organism: Treponema denticola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-12-05
Authors: Clark, N.D., Malkowski, M.G.
PDB entry 9mdl: Clostridioides difficile Transferase B Component Trimer
Classification: TOXIN
Source organism: Clostridioides difficile R20291
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.19 Å
Deposited: 2024-12-05
Authors: Sheedlo, M.J., Mullard, R.M.
PDB entry 9mdm: Crystal Structure of C412S Mutant of C0362 (TDE_0362 [TDE0362] resi 205-647)
Classification: HYDROLASE
Source organism: Treponema denticola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2024-12-05
Authors: Clark, N.D., Malkowski, M.G.
PDB entry 9mdn: Clostridioides difficile Transferase B Component Trimer in Complex with the A Component
Classification: TOXIN
Source organism: Clostridioides difficile R20291
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.86 Å
Deposited: 2024-12-05
Authors: Sheedlo, M.J., Mullard, R.M.
PDB entry 9mdo: Crystal Structure of Y559A Prosegment Binding Loop Mutant of C0362 (TDE_0362 [TDE0362] resi 205-647)
Classification: HYDROLASE
Source organism: Treponema denticola
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-12-05
Authors: Clark, N.D., Malkowski, M.G.
PDB entry 9mdp: Clostridioides difficile Transferase B Component Tetramer
Classification: TOXIN
Source organism: Clostridioides difficile R20291
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.01 Å
Deposited: 2024-12-05
Authors: Sheedlo, M.J., Mullard, R.M.
PDB entry 9mdq: Crystal Structure of SARS-CoV-2 Omicron Main Protease (Mpro) Complex with Azapeptide Inhibitor 20a
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-12-05
Authors: Vishwakarma, J., Taylor, A.B., Harris, R.S.
PDB entry 9mdr: Clostridioides difficile Transferase B Component Symmetric Heptamer
Classification: TOXIN
Source organism: Clostridioides difficile R20291
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2024-12-05
Authors: Sheedlo, M.J., Mullard, R.M.
PDB entry 9mds: ROOL RNA nanocage (env-120)
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-05
Authors: Kretsch, R.C., Wu, Y., Das, R., Chiu, W.
PDB entry 9mdt: Crystal Structure Pyrophosphate-fructose 6-phosphate 1-phosphotransferase 1 (Pfk1) from Trichomonas vaginalis (ATP/Pyrophosphate complex)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2024-12-05
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mdu: Human CXCR4 tetramer
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-05
Authors: Zhang, Z., Patel, D.J., Junyu, X.
PDB entry 9mdv: Apo form of the estrogen receptor alpha ligand binding domain of Melanotaenia fluviatilis
Classification: NUCLEAR PROTEIN
Source organism: Melanotaenia fluviatilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-12-05
Authors: Pederick, J.L., McDougal, D.P., Bruning, J.B.
PDB entry 9mdw: 16mer self-complementary duplex RNA with all Watson-Crick base pairs
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.421 Å
Deposited: 2024-12-05
Authors: Fang, Z., Jia, X., Szostak, J.W.
PDB entry 9mdx: 16mer self-complementary duplex RNA with s(2)U:A pair sequence 1
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-12-05
Authors: Fang, Z., Jia, X., Szostak, J.W.
PDB entry 9mdy: 16mer self-complementary duplex RNA with s(2)U:A pair sequence 2
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2024-12-05
Authors: Fang, Z., Jia, X., Szostak, J.W.
PDB entry 9mdz: anti-IL23R VHH
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2024-12-05
Authors: Kiefer, J.R., Koerber, J.T., Ota, N., Davies, C., Wallweber, H.A.
PDB entry 9me0: Goose Parvovirus Capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Goose parvovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2024-12-05
Authors: Jabbari, K., Mietzsch, M., McKenna, R.
PDB entry 9me1: hCXCR4-CXCL12 complex with 1:1 stoichiometry
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-12-05
Authors: Zhang, Z., Patel, D.J.
PDB entry 9me2: Bruton's tyrosine kinase with mutations in the activation loop in complex with compound A110162
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.38 Å
Deposited: 2024-12-05
Authors: Lin, D.Y., Andreotti, A.H., Tonge, P.J., Bravo, E., Li, X.
PDB entry 9me3: Bruton's tyrosine kinase with mutations in the activation loop in complex with compound P301390
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2024-12-06
Authors: Lin, D.Y., Andreotti, A.H., Tonge, P.J., Bravo, E., Li, X.
PDB entry 9me4: Antibody fragments from mAb475 and mAb824 bound to the adhesin protein FimH
Classification: CELL ADHESION/IMMUNE SYSTEM
Source organism: Escherichia coli; Escherichia coli K-12; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-06
Authors: Hvorecny, K.L., Magala, P., Klevit, R.E., Kollman, J.M.
PDB entry 9me5: Antibody fragments from mAb824 and mAb926 bound to the adhesin protein FimH
Classification: CELL ADHESION/IMMUNE SYSTEM
Source organism: Escherichia coli; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-06
Authors: Hvorecny, K.L., Magala, P., Klevit, R.E., Kollman, J.M.
PDB entry 9me6: Antibody fragments from mAb21, mAb475, and mAb824 bound to the adhesin protein FimH
Classification: CELL ADHESION/IMMUNE SYSTEM
Source organism: Escherichia coli; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-06
Authors: Hvorecny, K.L., Magala, P., Klevit, R.E., Kollman, J.M.
PDB entry 9me7: Antibody fragments from mAb21 and mAb824 bound to the adhesin protein FimH containing alpha-methyl mannose
Classification: CELL ADHESION/IMMUNE SYSTEM
Source organism: Escherichia coli; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-06
Authors: Hvorecny, K.L., Magala, P., Klevit, R.E., Kollman, J.M.
PDB entry 9me8: Co-crystal structure of maltose binding protein (MBP)-human SENP3 fusion protein in complex with PELP1 peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.93 Å
Deposited: 2024-12-06
Authors: Kaminski, A.M., Gordon, J., Pedersen, L.C., Stanley, R.E.
PDB entry 9me9: Cryo-EM structure of the magnesium transporter MgtA in an E1-like conformation with bound Mg2+ ions
Classification: TRANSPORT PROTEIN
Source organism: Lactococcus lactis subsp. lactis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-06
Authors: Khan, M.B., Primeau, J.O., Basu, P.C., Morth, J.P., Lemieux, M.J., Young, H.S.
PDB entry 9mea: Crystal Structure of Pyrophosphate-fructose 6-phosphate 1-phosphotransferase 1 (Pfk1) from Trichomonas vaginalis (AMP/fructose-1,6-biphosphate complex)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2024-12-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9meb: Photoactivation in Bacteriophytochrome, 100 ps structure
Classification: SIGNALING PROTEIN
Source organism: Stigmatella aurantiaca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-12-06
Authors: Schmidt, M., Malla, T.
PDB entry 9mec: Crystal Structure of Pyrophosphate-fructose 6-phosphate 1-phosphotransferase 1 (Pfk1) from Trichomonas vaginalis (AMP/alpha-D-Glucose-6-phosphate complex)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-12-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9med: Crystal Structure Pyrophosphate-fructose 6-phosphate 1-phosphotransferase 1 (Pfk1) from Trichomonas vaginalis (AMP/beta-D-Glucose-6-phosphate complex)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2024-12-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mee: GOLLD RNA nanocage (env-38)
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-06
Authors: Kretsch, R.C., Wu, Y., Nye, G., Das, R., Chiu, W.
PDB entry 9mef: Conformational flexibility in HLA-B8: peptide tuning structural and dynamical changes
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2024-12-06
Authors: Li, L., Bouvier, M.
PDB entry 9meg: Conformational flexibility in HLA-B8: peptide tuning structural and dynamical changes
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-12-06
Authors: Li, L., Bouvier, M.
PDB entry 9meh: Crystal structure of the dimodular LgrA after protein ligation
Classification: BIOSYNTHETIC PROTEIN
Source organism: Brevibacillus parabrevis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2024-12-06
Authors: Pistofidis, A., Schmeing, T.M.
PDB entry 9mei: Crystal Structure of SARS-CoV-2 Mpro mutant L50F E166V with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN, HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2024-12-06
Authors: Zvornicanin, S.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9mej: Global structure of hCXCR4 and HIV-2 gp120
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.99 Å
Deposited: 2024-12-06
Authors: Zhang, Z., Patel, D.J.
PDB entry 9mek: Structure of the human TWIK-2 potassium channel
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-12-06
Authors: Khanra, N.K., Long, S.B.
PDB entry 9mel: Structure of the human TWIK-2 potassium channel in complex with pimozide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-12-06
Authors: Khanra, N.K., Long, S.B.
PDB entry 9mem: Anabaena Sensory Rhodopsin Structure Determination from Paramagnetic Relaxation Enhancement and NMR Restraints
Classification: MEMBRANE PROTEIN
Source organism: Nostoc sp.
Experimental method: SOLID-STATE NMR
Deposited: 2024-12-06
Authors: Vaz, R.F., Brown, L., Ladizhansky, V.
PDB entry 9men: CryoEM structure of hCXCR4 tetramer bound to HIV-2/gp120/V3 loop
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Virus-associated RNAs
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2024-12-07
Authors: Zhang, Z., Patel, D.J.
PDB entry 9meo: Co-MAHF-9 A8D Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.85 Å
Deposited: 2024-12-07
Authors: Richardson-Matthews, R.M.
PDB entry 9mep: Co-MAHF-9 A8W Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2024-12-07
Authors: Richardson-Matthews, R.M.
PDB entry 9meq: Co-MAHF-9 A8Q Dehydrated Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2024-12-08
Authors: Richardson-Matthews, R.M.
PDB entry 9mer: Structure of H1H5:FluA20 Chimeric Influenza HA Complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-12-08
Authors: Seraj, N.
PDB entry 9mes: NMR strucuture of Dengue Virus 2 capsid protein with the deletion of the intrinsically disordered N-terminal region
Classification: VIRAL PROTEIN
Source organism: dengue virus type 2
Experimental method: SOLUTION NMR
Deposited: 2024-12-08
Authors: Barbosa, G.M., Da Poian, A.T., Almeida, F.C.L.
PDB entry 9met: CXCR4-HIV-2/gp120-CD4
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Virus-associated RNAs
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.65 Å
Deposited: 2024-12-08
Authors: Zhang, Z., Patel, D.J.
PDB entry 9meu: CXCR4 tetramer bound to 4 CXCL12 dimers
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2024-12-08
Authors: Zhang, Z., Patel, D.J.
PDB entry 9mev: Structure of H1H3:FluA20 Chimeric Antigen Complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-12-08
Authors: Seraj, N.
PDB entry 9mew: JUNV GP1, GP2, SSP and CR1-28 Fab complex in a pseudotyped virus membrane
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mammarenavirus juninense
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-12-09
Authors: Taylor, L.J., Sawaya, M.R., Castells-Graells, R., Rodriguez, J.A.
PDB entry 9mex: Structure of phosphocysteine intermediate of human PRL1 phosphatase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-12-09
Authors: Mahbub, L., Kozlov, G., Knorn, C., Gehring, K.
PDB entry 9mey: Crystal structure of RIT1(GDP) bound to LZTR1(Kelch domain)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2024-12-09
Authors: Dharmaiah, S., Bonsor, D.A., Simanshu, D.K.
PDB entry 9mez: Crystal structure of MRAS(GDP) bound to LZTR1(Kelch domain)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-12-09
Authors: Dharmaiah, S., Bonsor, D.A., Simanshu, D.K.
PDB entry 9mf0: Crystal structure of KRAS(GDP) bound to LZTR1(Kelch domain)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2024-12-09
Authors: Dharmaiah, S., Bonsor, D.A., Simanshu, D.K.
PDB entry 9mf1: Crystal structure of RIT1 in the GDP state
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-12-09
Authors: Dharmaiah, S., Bonsor, D.A., Simanshu, D.K.
PDB entry 9mf3: Crystal Structure of macrophage migration inhibitory factor from Plasmodium knowlesi
Classification: CYTOKINE
Source organism: Plasmodium knowlesi strain H
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-12-09
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mf4: De novo designed minibinder complexed with Clostridioides difficile Toxin B
Classification: TOXIN
Source organism: Clostridioides difficile; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-12-09
Authors: Miletic, S., Li, Z., Ragotte, R.J., Melnyk, R.
PDB entry 9mf5: CryoEM structure of the Protein Phosphatase 2A (Abeta-B56gamma-Calpha) holoenzyme complex
Classification: SIGNALING PROTEIN, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-09
Authors: Day, A., Taylor, D.
PDB entry 9mf6: Crystal Structure of Pyrophosphate-fructose 6-phosphate 1-phosphotransferase 1 (Pfk1) from Trichomonas vaginalis (ADP/5-O-phosphono-alpha-D-ribofuranose complex)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-12-09
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mf7: Backbone alpha-Methylation in the Villin Headpiece Miniprotein: Prototype HP35
Classification: STRUCTURAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-12-09
Authors: Harmon, T.W., Lin, Y., Sutton, R.T., Osborne, S., Horne, W.S.
PDB entry 9mf8: Backbone alpha-Methylation in the Villin Headpiece Miniprotein: HP35 with Aib at Position 15
Classification: STRUCTURAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-12-09
Authors: Harmon, T.W., Lin, Y., Sutton, R.T., Osborne, S., Horne, W.S.
PDB entry 9mf9: Backbone alpha-Methylation in the Villin Headpiece Miniprotein: HP35 with Calpha-methyl-Ser at Position 15
Classification: STRUCTURAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-12-09
Authors: Harmon, T.W., Lin, Y., Sutton, R.T., Osborne, S., Horne, W.S.
PDB entry 9mfa: Backbone alpha-Methylation in the Villin Headpiece Miniprotein: HP35 with Aib at Position 30
Classification: STRUCTURAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-12-09
Authors: Harmon, T.W., Lin, Y., Sutton, R.T., Osborne, S., Horne, W.S.
PDB entry 9mfb: Backbone alpha-Methylation in the Villin Headpiece Miniprotein: HP35 with Calpha-methyl-Lys at Position 30
Classification: STRUCTURAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-12-09
Authors: Harmon, T.W., Lin, Y., Sutton, R.T., Osborne, S., Horne, W.S.
PDB entry 9mfc: Crystal structure of Purine nucleoside phosphorylase from Trichomonas vaginalis (adenosine and phosphate bound)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2024-12-09
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mfe: cryoEM structure of Escherichia phage YDC107 tail core
Classification: VIRAL PROTEIN
Source organism: Escherichia phage YDC107_1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2024-12-09
Authors: Kopylov, M.
PDB entry 9mff: Structure of zebrafish OTOP1 in nanodisc in complex with inhibitor C2.2
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-12-09
Authors: Burendei, B., Ward, A.B.
PDB entry 9mfg: Complex of IL23 receptor and VHH
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-12-09
Authors: Kiefer, J.R., Wallweber, H.A., Koerber, J.T., Ota, N., Davies, C.
PDB entry 9mfh: env2 cobalamin riboswitch aptamer domain in the apo state
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-12-09
Authors: Olenginski, L.T., Batey, R.T.
PDB entry 9mfi: Cu-MAHF-9 A8S Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.89 Å
Deposited: 2024-12-09
Authors: Richardson-Matthews, R.M.
PDB entry 9mfj: Zn-MAHF-9 A8S Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.88 Å
Deposited: 2024-12-09
Authors: Richardson-Matthews, R.M.
PDB entry 9mfk: Mn-MAHF-9 A8S Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2024-12-09
Authors: Richardson-Matthews, R.M.
PDB entry 9mfl: Structure of zebrafish OTOP1 in nanodisc in the presence of inhibitor C11
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2024-12-10
Authors: Burendei, B., Ward, A.B.
PDB entry 9mfm: Structure of zebrafish OTOP1 in nanodisc in complex with inhibitor C2.36
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2024-12-10
Authors: Burendei, B., Ward, A.B.
PDB entry 9mfn: Crystal Structure of ADI-64596 (human Fab, with substituted IgG1-CH1 (HC-L145Q, K147E, and S181E) and substituted kappa constant domain (LC-T129R, T178R, and T180Q))
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-12-10
Authors: Battles, M.B., Welin, M., Laursen, M.
PDB entry 9mfo: Human DHX9 in Complex with Compound 1 and ADP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.26 Å
Deposited: 2024-12-10
Authors: Lockbaum, G.J., Lee, Y.-T., Sickmier, E.A., Boriack-Sjodin, P.A., Grigoriu, S.
PDB entry 9mfp: Cat DHX9 in Complex with Compound 1 and ADP
Classification: HYDROLASE
Source organism: Felis catus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2024-12-10
Authors: Lockbaum, G.J., Lee, Y.-T., Sickmier, E.A., Boriack-Sjodin, P.A., Grigoriu, S.
PDB entry 9mfq: Cat DHX9 in Complex with Compound 10 and ADP
Classification: HYDROLASE
Source organism: Felis catus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2024-12-10
Authors: Lockbaum, G.J., Lee, Y.-T., Sickmier, E.A., Boriack-Sjodin, P.A., Grigoriu, S.
PDB entry 9mfr: Cat DHX9 in Complex with Compound 23 and ADP
Classification: HYDROLASE
Source organism: Felis catus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-12-10
Authors: Lockbaum, G.J., Lee, Y.-T., Sickmier, E.A., Boriack-Sjodin, P.A., Grigoriu, S.
PDB entry 9mfs: Cat DHX9 in Complex with ATX968 and ADP
Classification: HYDROLASE
Source organism: Felis catus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2024-12-10
Authors: Lockbaum, G.J., Lee, Y.-T., Sickmier, E.A., Boriack-Sjodin, P.A., Grigoriu, S.
PDB entry 9mft: Human DHX9 in Complex with ATX968 and ADP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-12-10
Authors: Lockbaum, G.J., Lee, Y.-T., Sickmier, E.A., Boriack-Sjodin, P.A., Grigoriu, S.
PDB entry 9mfu: Cryo-EM of helical fibers formed by (NAP)FFGPQYQP
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2024-12-10
Authors: Zia, A., Qiao, Y., Xu, B., Wang, F.
PDB entry 9mfv: Motor domain with Apo AAA1 and ADP AAA3 from yeast full-length dynein-1 in 0.1 mM ATP condition
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-10
Authors: Geohring, I.C., Chai, P., Iyer, B.R.
PDB entry 9mfw: Motor domain with ADP AAA1 and ADP AAA3 from yeast full-length dynein-1 in 0.1 mM ATP condition
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-12-10
Authors: Geohring, I.C., Chai, P., Iyer, B.R.
PDB entry 9mfx: Motor domain alone with Apo AAA1 and ADP AAA3 from yeast full-length dynein-1 and Pac1 in 0.1 mM ATP condition
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-10
Authors: Geohring, I.C., Chai, P., Iyer, B.R.
PDB entry 9mfy: Motor domain-Pac1 complex with ADP AAA1 and Apo AAA3 from yeast full-length dynein-1 and Pac1 in 0.1 mM ATP condition
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-10
Authors: Geohring, I.C., Chai, P., Iyer, B.R.
PDB entry 9mfz: Streptavidin-E101Q-K121A-L124E bound to Fe(III)-biotin-pentyl-dipicolylamine cofactor
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-12-10
Authors: Biswas, A., Follmer, A.H., Borovik, A.S.
PDB entry 9mg0: Structure of Kluyveromyces lactis mRNA cap (guanine-N7) methyltransferase, Abd1, in complex with SAH
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis NRRL Y-1140
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-12-10
Authors: Nilson, D.J., Fedorov, E., Ghosh, A.
PDB entry 9mg1: Structure of Kluyveromyces lactis mRNA cap (guanine-N7) methyltransferase, Abd1, in complex with adenine and m7GTP
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis NRRL Y-1140
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2024-12-10
Authors: Nilson, D.J., Fedorov, E., Ghosh, A.
PDB entry 9mg2: Structure of Kluyveromyces lactis mRNA cap (guanine-N7) methyltransferase, Abd1, in complex with sinefungin
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis NRRL Y-1140
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2024-12-10
Authors: Nilson, D.J., Fedorov, E., Ghosh, A.
PDB entry 9mg3: Structure of Kluyveromyces lactis mRNA cap (guanine-N7) methyltransferase, Abd1, in complex with sinefungin and GTP
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis NRRL Y-1140
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2024-12-10
Authors: Nilson, D.J., Fedorov, E., Ghosh, A.
PDB entry 9mg4: Structure of Saccharomyces cerevisiae mRNA cap (guanine-N7) methyltransferase, Abd1, in complex with SAH
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae YJM789
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-12-10
Authors: Nilson, D.J., Fedorov, E., Ghosh, A.
PDB entry 9mg5: Structure of Saccharomyces cerevisiae mRNA cap (guanine-N7) methyltransferase, Abd1, in complex with sinefungin and GTP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae YJM789
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-12-10
Authors: Nilson, D.J., Fedorov, E., Ghosh, A.
PDB entry 9mg6: Structure of Saccharomyces cerevisiae mRNA cap (guanine-N7) methyltransferase variant, Abd1-K163R-K311R-F387Y-Y416F, in complex with sinefungin and GTP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae YJM789
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-12-10
Authors: Nilson, D.J., Ghosh, A.
PDB entry 9mg7: Crystal structure of Purine nucleoside phosphorylase from Trichomonas vaginalis (phosphate bound)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2024-12-10
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mg8: Crystal Structure of b-iTHR-110
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-12-10
Authors: Bera, A.K., Harley, P., Baker, D.
PDB entry 9mg9: Crystal structure of Purine nucleoside phosphorylase from Trichomonas vaginalis (glycerol bound)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-12-10
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mga: Cryo-EM of 3-protofilament helical fibers formed by (NAP)FFGPQYQP
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-12-10
Authors: Zia, A., Qiao, Y., Xu, B., Wang, F.
PDB entry 9mgb: scFv antibody CL33 bound to R-phycoerythrin
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Neopyropia tenera
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-12-10
Authors: Rashleigh, L., Gully, B.S.
PDB entry 9mge: beta-barrel assembly machine from Escherichia coli in an early state of substrate assembly
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-12-10
Authors: Thomson, B.D., Kahne, D.
PDB entry 9mgf: beta-barrel assembly machine from Escherichia coli in a middle state of substrate assembly
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-10
Authors: Thomson, B.D., Kahne, D.
PDB entry 9mgg: beta-barrel assembly machine from Escherichia coli in a late state of substrate assembly
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-12-10
Authors: Thomson, B.D., Kahne, D.
PDB entry 9mgh: In situ cryo-EM structure of bacteriophage Ur-lambda tail side fiber
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-12-10
Authors: Yu, H., Liu, J., Molineux, I.J.
PDB entry 9mgj: Crystal structure of Purine nucleoside phosphorylase from Trichomonas vaginalis (mannose bound)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2024-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mgk: Human prostaglandin transporter(OATP2A1)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-12-11
Authors: Yu, P., Orlando, M.A., Orlando, B.J.
PDB entry 9mgl: Crystal structure of PRMT5:MEP50 in complex with MTA and GSK3326595
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-12-11
Authors: Whittington, D.A.
PDB entry 9mgm: Crystal structure of PRMT5:MEP50 in complex with MTA and compound 24
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-12-11
Authors: Whittington, D.A.
PDB entry 9mgn: Crystal structure of PRMT5:MEP50 in complex with MTA and compound 41
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2024-12-11
Authors: Whittington, D.A.
PDB entry 9mgo: Crystal structure of Purine nucleoside phosphorylase from Trichomonas vaginalis (citrate bound)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mgp: Crystal structure of PRMT5:MEP50 in complex with MTA and compound 46a
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2024-12-11
Authors: Whittington, D.A.
PDB entry 9mgq: Crystal structure of PRMT5:MEP50 in complex with sinefungin and compound 47
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-12-11
Authors: Whittington, D.A.
PDB entry 9mgr: Crystal structure of PRMT5:MEP50 in complex with MTA and compound 51
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-12-11
Authors: Whittington, D.A.
PDB entry 9mgs: Structure of aminoglycoside acetyltransferase AAC(3)-Ia in complex with sisomicin and CoA
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-12-11
Authors: Hemmings, M., Zielinski, M., Blanchet, J., Golkar, T., Berghuis, A.M.
PDB entry 9mgt: Structure of N-3 aminoglycoside acetyltransferase XIa (AAC(3)-XIa) in complex with coenzyme A and tobramycin
Classification: TRANSFERASE
Source organism: Corynebacterium striatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-12-11
Authors: Zielinski, M., Hemmings, M., Golkar, T., Blanchet, J., Berghuis, A.M.
PDB entry 9mgu: Structure of aminoglycoside acetyltransferase AAC(3)-Ia in complex with CoA
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-12-11
Authors: Hemmings, M., Blanchet, J., Zielinski, M., Golkar, T., Berghuis, A.M.
PDB entry 9mgv: Crystal structure of Apo Purine nucleoside phosphorylase from Trichomonas vaginalis (H32 form)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mgw: Dunaliella salina PSI-LHCI-TIDI1 supercomplex
Classification: PHOTOSYNTHESIS
Source organism: Dunaliella salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-11
Authors: Liu, H.W., Khera, R., Iwai, M., Merchant, S.S.
PDB entry 9mgx: Crystal structure of Purine nucleoside phosphorylase from Trichomonas vaginalis (phosphate/adenine bound)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mgy: Cryo-EM structure of Human NLRP3 complex with compound 1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-11
Authors: Mammoliti, O., Carbajo, R.J., Perez-Benito, L., Yu, X., Prieri, M.L.C., Bontempi, L., Embrechts, S., Paesmans, I., Bassi, M., Bhattacharya, A., Roman, S.C., Hoog, S.D., Demin, S., Gijsen, H.J.M., Hache, G., Jacobs, T., Jerhaoui, S., Leenaerts, J., Lutter, F.H., Matico, R., Oehlrich, D., Perrier, M., Ryabchuk, P., Schepens, W., Sharma, S., Somers, M., Suarez, J., Surkyn, M., Opdenbosch, N.V., Verhulst, T., Bottelbergs, A.
PDB entry 9mgz: Dunaliella tertiolecta PSI-LHCI-TIDI1 supercomplex
Classification: PHOTOSYNTHESIS
Source organism: Dunaliella tertiolecta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-12-11
Authors: Liu, H.W., Khera, R., Iwai, M., Merchant, S.S.
PDB entry 9mh0: Dunaliella salina PSI-LHCI supercomplex
Classification: PHOTOSYNTHESIS
Source organism: Dunaliella salina
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-11
Authors: Liu, H.W., Khera, R., Iwai, M., Merchant, S.S.
PDB entry 9mh1: Dunaliella tertiolecta PSI-LHCI supercomplex
Classification: PHOTOSYNTHESIS
Source organism: Dunaliella tertiolecta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-12-11
Authors: Liu, H.W., Khera, R., Iwai, M., Merchant, S.S.
PDB entry 9mh2: Crystal structure of Purine nucleoside phosphorylase from Trichomonas vaginalis (Adenosine and glycine complex)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mh3: Structure of N-3 aminoglycoside acetyltransferase XI (AAC(3)-XI) in complex with acetyl coenzyme A
Classification: TRANSFERASE
Source organism: Corynebacterium striatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2024-12-11
Authors: Zielinski, M., Hemmings, M., Golkar, T., Blanchet, J., Berghuis, A.M.
PDB entry 9mh4: Crystal Structure of Bifunctional protein GlmU from Klebsiella aerogenes
Classification: TRANSFERASE
Source organism: Klebsiella aerogenes KCTC 2190
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2024-12-11
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9mh5: Structure of N-3 aminoglycoside acetyltransferase XI (AAC(3)-XI) in complex with coenzyme A and acetylated sisomicin
Classification: TRANSFERASE
Source organism: Corynebacterium striatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2024-12-11
Authors: Zielinski, M., Hemmings, M., Golkar, T., Blanchet, J., Berghuis, A.M.
PDB entry 9mh6: Structure of N-3 aminoglycoside acetyltransferase XIa (AAC(3)-XIa) in complex with acetylamino coenzyme A and gentamicin
Classification: TRANSFERASE
Source organism: Corynebacterium striatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2024-12-11
Authors: Zielinski, M., Hemmings, M., Golkar, T., Blanchet, J., Berghuis, A.M.
PDB entry 9mh7: Structure of N-3 aminoglycoside acetyltransferase XI (AAC(3)-XI) in complex with coenzyme A, and one apo monomer
Classification: TRANSFERASE
Source organism: Corynebacterium striatum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-12-11
Authors: Zielinski, M., Hemmings, M., Golkar, T., Blanchet, J., Berghuis, A.M.
PDB entry 9mh8: CryoEM structure of G protein-gated inwardly rectifying potassium channel GIRK2 R92F (State 2)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2024-12-11
Authors: Nguyen, H., Mount, J., Yuan, P., Slesinger, P.
PDB entry 9mh9: CryoEM structure of G protein-gated inwardly rectifying potassium channel 2 R92F (State 1)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2024-12-11
Authors: Nguyen, H., Mount, J., Yuan, P., Slesinger, P.
PDB entry 9mha: CryoEM Structure of Zaire Ebola Virus Envelope Glycoprotein GP
Classification: VIRAL PROTEIN
Source organism: Ebola virus - Mayinga, Zaire, 1976
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-12-11
Authors: Weidle, C., Borst, A.J.
PDB entry 9mhb: Crystal Structure of Human P38 alpha MAPK In Complex with MW01-14-064SRM
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-12-11
Authors: Minasov, G., Tokars, V.L., Roy, S.M., Watterson, D.M., Shuvalova, L.
PDB entry 9mhd: Cryo-EM structure of S. aureus TarGH in complex with ATP-gamma-S
Classification: MEMBRANE PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-12-11
Authors: Peters, S.C., Worrall, L.J., Strynadka, N.C.J.
PDB entry 9mhe: Native tagless Lassa virus spike complex bound to ARN-75039 at pH 8.0
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Lassa virus Josiah
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.01 Å
Deposited: 2024-12-11
Authors: Cohen-Dvashi, H., Katz, M., Diskin, R.
PDB entry 9mhf: Cryo-EM reconstruction of PI3KC3-C1 in complex with Human RAB1A(Q70L)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2024-12-11
Authors: Cook, A.S.I., Hurley, J.H., Chen, M.
PDB entry 9mhg: Cryo EM reconstruction of PI3KC3-C1 in complex with Human RAB1A(Q70L), VPS34 kinase domain in the inactive conformation
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-11
Authors: Cook, A.S.I., Hurley, J.H., Chen, M.
PDB entry 9mhh: PI3KC3-C1 in complex with RAB1A. VPS34 kinase domain active conformation
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2024-12-11
Authors: Cook, A.S.I., Hurley, J.H., Chen, M.
PDB entry 9mhi: The structure of SeMet substituted Zcp
Classification: METAL BINDING PROTEIN
Source organism: Neisseria gonorrhoeae FA 1090
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2024-12-12
Authors: Bera, A.K., Liyayi, I.K., Criss, A.K., Noinaj, N.