LiteFold/PDB huggingface dataset:
PDB entry 8usp: Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway
Classification: METAL TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-28
Authors: Vasquez, S., Drennan, C.L.
PDB entry 8usq: Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway
Classification: METAL TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 12.77 Å
Deposited: 2023-10-29
Authors: Vasquez, S., Drennan, C.L.
PDB entry 8usr: IL17A homodimer complexed to Compound 23
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-10-29
Authors: Argiriadi, M.A., Ramos, A.L.
PDB entry 8uss: IL17A complexed to Compound 7
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2023-10-29
Authors: Argiriadi, M.A., Ramos, A.L.
PDB entry 8ust: In-virion structure of Ebola virus nucleocapsid-like assemblies from recombinant virus-like particles (nucleoprotein, VP24,VP35,VP40)
Classification: VIRAL PROTEIN/RNA
Source organism: Ebola virus - Mayinga, Zaire, 1976; Zaire
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.3 Å
Deposited: 2023-10-29
Authors: Watanabe, R., Zyla, D., Saphire, E.O.
PDB entry 8usu: Crystal Structure of L-galactose 1-dehydrogenase of Myrciaria dubia in complex with NAD
Classification: PLANT PROTEIN
Source organism: Myrciaria dubia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2023-10-30
Authors: Santillan, J.A.V., Cabrejos, D.A.L., Pereira, H.M., Gomez, J.C.C., Garratt, R.C.
PDB entry 8usw: CNQX-bound GluN1a-3A NMDA receptor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.23 Å
Deposited: 2023-10-30
Authors: Michalski, K., Furukawa, H.
PDB entry 8usx: Glycine-bound GluN1a-3A NMDA receptor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-10-30
Authors: Michalski, K., Furukawa, H.
PDB entry 8usy: HIV-1 Integrase F185H N222K Complexed with Allosteric Inhibitor BI-D
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 4.4 Å
Deposited: 2023-10-30
Authors: Montermoso, S., Gupta, K., Eilers, G., Bushman, F.D., Van Duyne, G.D.
PDB entry 8usz: Cryo-EM Structure of Full-Length Spike Protein of Omicron XBB.1.5
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-10-30
Authors: Huynh, K.W., Chang, J.S., Fennell, K.F., Che, Y., Wu, H.
PDB entry 8ut0: Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-10-30
Authors: Yelland, J.N., Taylor, D.W., Johnson, A.W.
PDB entry 8ut1: Alpha7-nicotinic acetylcholine receptor bound to epibatidine
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-10-30
Authors: Burke, S.M., Hibbs, R.E., Noviello, C.M.
PDB entry 8ut2: Pre-fusion Measles virus fusion protein complexed with Fab 77
Classification: VIRAL PROTEIN
Source organism: Measles morbillivirus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2023-10-30
Authors: Zyla, D., Saphire, E.O.
PDB entry 8ut3: CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-10-30
Authors: Huang, J., Han, J., Ward, A.B.
PDB entry 8ut4: CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody 09-1B12
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-30
Authors: Huang, J., Han, J., Ward, A.B.
PDB entry 8ut5: CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody UCA6_N55T
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-30
Authors: Huang, J., Han, J., Ward, A.B.
PDB entry 8ut6: CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-15 days post immunization
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-10-30
Authors: Huang, J., Han, J., Ward, A.B.
PDB entry 8ut7: CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-28 days post immunization
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-30
Authors: Huang, J., Han, J., Ward, A.B.
PDB entry 8ut8: CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-15 days post-immunization
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-10-30
Authors: Huang, J., Han, J., Ward, A.B.
PDB entry 8ut9: CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-28 days post immunization
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-30
Authors: Huang, J., Han, J., Ward, A.B.
PDB entry 8uta: yjdF riboswitch from R. gauvreauii in complex with proflavine bound to Fab BL3-6 S97N
Classification: RNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2023-10-30
Authors: Krochmal, D., Lewicka, A., Piccirilli, J.A.
PDB entry 8utb: Alpha7-nicotinic acetylcholine receptor bound to epibatidine and NS-1738
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-10-30
Authors: Burke, S.M., Noviello, C.M., Hibbs, R.E.
PDB entry 8utc: HUMAN LEUKOCYTE ANTIGEN B*07:02 IN COMPLEX WITH SARS-COV2 EPITOPE N105-113 (Y111F mutant)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-10-30
Authors: Oltean, N., Nyovanie, S., Hashem, A., Patskovska, L., Patskovsky, Y., Krogsgaard, M.
PDB entry 8utd: CryoEM Structure of HCA2-Gi1 in complex with MK-1903
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2023-10-30
Authors: Krumm, B.E., Kang, H.J., Diberto, J.F., Kapolka, N.J., Gumpper, R.H., Olsen, R.H.J., Huang, X.P., Zhang, S., Fay, J.F., Roth, B.L.
PDB entry 8ute: Structure of SARS-Cov2 3CLPro in complex with Compound 27
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-10-31
Authors: Krishnamurthy, H., Zhuang, N., Qiang, D., Wu, Y., Klein, D.J.
PDB entry 8utf: Structure of the Measles virus Fusion protein in the post-fusion conformation
Classification: VIRAL PROTEIN
Source organism: Measles virus strain Ichinose-B95a
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2023-10-31
Authors: Zyla, D., Saphire, E.O.
PDB entry 8utg: An RNA G-Quadruplex from the NS5 gene in the West Nile Virus Genome
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-10-31
Authors: Terrell, J.R., Le, T.T., Wilson, W.D., Siemer, J.L.
PDB entry 8uti: Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-10-31
Authors: Yelland, J.N., Taylor, D.W., Johnson, A.W.
PDB entry 8utj: E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-31
Authors: Kimbrough, E.M., Dunham, C.M., Nguyen, H.A.
PDB entry 8utk: IL-23R minibinder - 23R-B04dslf02IB
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-10-31
Authors: Bera, A.K., Berger, S.A., Kang, A., Baker, D.
PDB entry 8utl: Bovine trypsin in complex with Thr3Dap mutated microviridin J
Classification: HYDROLASE
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-10-31
Authors: Chen, W., Bruner, S.D.
PDB entry 8utm: CryoEM Structure of Allosterically Switchable De Novo Protein sr322, In Closed State without Effector Peptide, off Target Multimeric State
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.32 Å
Deposited: 2023-10-31
Authors: Weidle, C., Borst, A.
PDB entry 8utn: KIF1A[1-393] AMP-PNP bound two-heads-bound state in complex with a microtubule (class T23L1)
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8uto: KIF1A[1-393] AMP-PNP bound two-heads-bound state in complex with a microtubule - class T2L1
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8utp: KIF1A[1-393] - AMP-PNP two-heads-bound state in complex with a microtubule - class T3L1
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8utq: KIF1A[1-393] AMP-PNP bound one-head-bound state in complex with a microtubule - class T1L02*
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8utr: KIF1A[1-393] ADP bound in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8uts: KIF1A[1-393] APO in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8utt: KIF1A[1-393] P305L mutant AMP-PNP bound two-heads-bound state in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8utu: KIF1A[1-393] P305L mutant AMP-PNP bound one and two heads bound states merged, in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8utv: KIF1A[1-393] P305L mutant ADP bound in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8utw: KIF1A[1-393] P305L mutant APO in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8utx: Solution structure of a 12-mer peptide bearing a bicyclic Asx motif mimic (BAMM) as a synthetic N-cap
Classification: PEPTIDE BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-10-31
Authors: Mi, T.X., Burgess, K.
PDB entry 8uty: KIF1A[1-393] P364L mutant AMP-PNP bound two-heads-bound state in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-31
Authors: Benoit, M.P.M.H., Rao, L., Asenjo, A.B., Gennerich, A., Sosa, H.
PDB entry 8uu4: Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)
Classification: RIBOSOME
Source organism: Listeria innocua
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-31
Authors: Seely, S.M., Basu, R.S., Gagnon, M.G.
PDB entry 8uu5: Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
Classification: RIBOSOME
Source organism: Escherichia coli; Listeria innocua; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-31
Authors: Seely, S.M., Basu, R.S., Gagnon, M.G.
PDB entry 8uu6: Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)
Classification: RIBOSOME
Source organism: Escherichia coli; Listeria innocua; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-31
Authors: Seely, S.M., Basu, R.S., Gagnon, M.G.
PDB entry 8uu7: Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)
Classification: RIBOSOME
Source organism: Escherichia coli; Listeria innocua; Listeria monocytogenes EGD-e
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-10-31
Authors: Seely, S.M., Basu, R.S., Gagnon, M.G.
PDB entry 8uu8: Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)
Classification: RIBOSOME
Source organism: Escherichia coli; Listeria innocua; Listeria monocytogenes EGD-e; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-31
Authors: Seely, S.M., Basu, R.S., Gagnon, M.G.
PDB entry 8uu9: Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)
Classification: RIBOSOME
Source organism: Escherichia coli; Listeria innocua; Listeria monocytogenes EGD-e; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-10-31
Authors: Seely, S.M., Basu, R.S., Gagnon, M.G.
PDB entry 8uua: Cryo-EM structure of the Listeria innocua 50S ribosomal subunit in complex with HflXr (structure III)
Classification: RIBOSOME
Source organism: Listeria innocua; Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-31
Authors: Seely, S.M., Basu, R.S., Gagnon, M.G.
PDB entry 8uub: Structure of hypothiocyanous acid reductase (Har) from Streptococcus pneumoniae
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae D39
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-10-31
Authors: Shearer, H.L., Currie, M.J., Dickerhof, N., Dobson, R.C.J.
PDB entry 8uuc: Crystal structure of a bacterial clusterless MutYX bound to an Abasic site analog (THF) opposite d(8-oxo-G)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Eggerthella sp. YY7918; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-11-01
Authors: Trasvina-Arenas, C.H., David, S.S., Fisher, A.J.
PDB entry 8uud: BCX2627 complexed with human FVIIa and soluble Tissue Factor.
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-11-01
Authors: Krishnan, R., Kotian, P.
PDB entry 8uue: Glycine-bound GluN1a-3A LBD heterotetramer (local refinement)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2023-11-01
Authors: Michalski, K., Furukawa, H.
PDB entry 8uuf: SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun11941
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2023-11-01
Authors: Ansari, A., Tan, B., Riuz, F.X., Arnold, E., Wang, J.
PDB entry 8uug: SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12303
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2023-11-01
Authors: Ansari, A., Tan, B., Ruiz, F.X., Arnold, E., Wang, J.
PDB entry 8uuh: SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12199
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-11-01
Authors: Ansari, A., Tan, B., Ruiz, F.X., Arnold, E., Wang, J.
PDB entry 8uui: X-ray structure of Interleukin-23 in complex with peptide 23-446
Classification: CYTOKINE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-11-01
Authors: Joseph, J.S., Sridhar, V.S., Liu, M., Hu, Y., Gatchalian, J.
PDB entry 8uuj: CryoEM Structure of HCA2 DREADD Gi1 in complex with FCH-2296413
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2023-11-01
Authors: Krumm, B.E., Kang, H.J., Diberto, J.F., Kapolka, N.J., Gumpper, R.H., Olsen, R.H.J., Huang, X.P., Zhang, S., Fay, J.F., Roth, B.L.
PDB entry 8uuk: Pendrin in apo
Classification: TRANSPORT PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-11-01
Authors: Wang, L., Hoang, A., Zhou, M.
PDB entry 8uul: Prototypic SARS-CoV-2 spike (containing K417) in the closed conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-11-01
Authors: Geng, Q., Liu, B., Li, F.
PDB entry 8uum: Prototypic SARS-CoV-2 spike (containing K417) in the open conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-11-01
Authors: Geng, Q., Liu, B., Li, F.
PDB entry 8uun: Prototypic SARS-CoV-2 spike (containing V417) in the closed conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-11-01
Authors: Geng, Q., Liu, B., Li, F.
PDB entry 8uuo: Prototypic SARS-CoV-2 spike (containing V417) in the open conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-11-01
Authors: Geng, Q., Liu, B., Li, F.
PDB entry 8uup: Structure of the Measles virus Fusion protein in the pre-fusion conformation
Classification: VIRAL PROTEIN
Source organism: Measles virus strain Ichinose-B95a
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.11 Å
Deposited: 2023-11-01
Authors: Zyla, D., Saphire, E.O.
PDB entry 8uuq: Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11
Classification: VIRAL PROTEIN
Source organism: Measles virus strain Ichinose-B95a; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.34 Å
Deposited: 2023-11-01
Authors: Zyla, D., Saphire, E.O.
PDB entry 8uur: Structure of Serratia proteamaculans antifeeding prophage mini-fibre (AfpX13)
Classification: STRUCTURAL PROTEIN
Source organism: Serratia proteamaculans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-11-01
Authors: Young, P.G., Hurst, M.R.H.
PDB entry 8uus: Structure of Serratia proteamaculans antifeeding prophage Fibre foot domain (AfpX13)
Classification: STRUCTURAL PROTEIN
Source organism: Serratia proteamaculans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2023-11-01
Authors: Young, P.G., Hurst, M.R.H.
PDB entry 8uut: Structure of Serratia entomophila antifeeding prophage Fibre foot domain (Afp13)
Classification: STRUCTURAL PROTEIN
Source organism: Serratia entomophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-11-01
Authors: Young, P.G., Hurst, M.R.H.
PDB entry 8uuu: SARS-Cov-2 papain-like protease (PLpro) with inhibitor Jun12162
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2023-11-02
Authors: Ansari, A., Tan, B., Ruiz, F.X., Arnold, E., Wang, J.
PDB entry 8uuv: SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12197
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2023-11-02
Authors: Ansari, A., Tan, B., Arnold, E., Ruiz, F.X., Wang, J.
PDB entry 8uuw: SARS-CoV-2 papain-like protease (PLpro) with inhibitor Jun12145
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-11-02
Authors: Ansari, A., Tan, B., Ruiz, F.X., Arnold, E., Wang, J.
PDB entry 8uux: Murine norovirus capsid protein in the presence of 1mM calcium
Classification: VIRAL PROTEIN
Source organism: Murine norovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2023-11-02
Authors: Smith, T.J.
PDB entry 8uuy: SARS-CoV-2 papain-like protease (PLpro) complex with inhibitor Jun12129
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2023-11-02
Authors: Ansari, A., Tan, B., Ruiz, F.X., Arnold, E., Wang, J.
PDB entry 8uuz: Campylobacter jejuni CosR apo form
Classification: DNA BINDING PROTEIN
Source organism: Campylobacter jejuni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2023-11-02
Authors: Zhang, Z.
PDB entry 8uv0: Discovery of (4-Pyrazolyl)-2-Aminopyrimidines as Potent and Selective Inhibitors of Cyclin-Dependent Kinase 2
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-11-02
Authors: Deller, M.C., Epling, L.B.
PDB entry 8uv1: Structure of TDP1 complexed with compound IB01
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-11-02
Authors: Lountos, G.T., Zhao, X.Z., Barakat, I., Wang, W., Agama, K., Al Mahmud, M.R., Pommier, Y., Burke, T.R.
PDB entry 8uv2: Human p97/VCP structure with a triazole inhibitor (NSC799462/hexamer)
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2023-11-02
Authors: Nandi, P., DeVore, K., Chiu, P.-L.
PDB entry 8uv3: Murine norovirus capsid protein + 1 mM MgCl2
Classification: VIRAL PROTEIN
Source organism: Murine norovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-11-02
Authors: Smith, T.J.
PDB entry 8uv4: M. tuberculosis CTP synthase filament bound to substrates
Classification: LIGASE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-11-02
Authors: Lynch, E.M., Kollman, J.M.
PDB entry 8uv8: M. tuberculosis CTP synthase tetramer bound to CTP
Classification: LIGASE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-11-02
Authors: Lynch, E.M., Kollman, J.M.
PDB entry 8uv9: M. tuberculosis CTP synthase bound to inhibitor GSK1570606A
Classification: LIGASE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-11-02
Authors: Lynch, E.M., Kollman, J.M.
PDB entry 8uva: M. tuberculosis CTP synthase bound to inhibitor GSK735826A
Classification: LIGASE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-11-02
Authors: Lynch, E.M., Kollman, J.M.
PDB entry 8uvb: Structure of NaCT-PF4a complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.13 Å
Deposited: 2023-11-02
Authors: Li, Y., Wang, D.N., Mindell, J.A., Rice, W.J., Song, J., Mikusevic, V., Marden, J.J., Becerril, A., Kuang, H., Wang, B.
PDB entry 8uvc: Structure of NaDC3-aKG complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.09 Å
Deposited: 2023-11-02
Authors: Li, Y., Wang, D.N., Mindell, J.A., Rice, W.J., Song, J., Mikusevic, V., Marden, J.J., Becerril, A., Kuang, H., Wang, B.
PDB entry 8uvd: Structure of NaDC3-PF4a complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.16 Å
Deposited: 2023-11-02
Authors: Li, Y., Wang, D.N., Mindell, J.A., Rice, W.J., Song, J., Mikusevic, V., Marden, J.J., Becerril, A., Kuang, H., Wang, B.
PDB entry 8uve: Structure of NaDC3-Succinate complex in Coo-Ci conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-11-02
Authors: Li, Y., Wang, D.N., Mindell, J.A., Rice, W.J., Song, J., Mikusevic, V., Marden, J.J., Becerril, A., Kuang, H., Wang, B.
PDB entry 8uvf: Structure of NaDC3-DMS complex in Ci-Ci conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.17 Å
Deposited: 2023-11-02
Authors: Li, Y., Wang, D.N., Mindell, J.A., Rice, W.J., Song, J., Mikusevic, V., Marden, J.J., Becerril, A., Kuang, H., Wang, B.
PDB entry 8uvg: Structure of NaDC3-DMS complex in Co-Ci conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-11-02
Authors: Li, Y., Wang, D.N., Mindell, J.A., Rice, W.J., Song, J., Mikusevic, V., Marden, J.J., Becerril, A., Kuang, H., Wang, B.
PDB entry 8uvh: Structure of NaCT-succ complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2023-11-02
Authors: Li, Y., Wang, D.N., Mindell, J.A., Rice, W.J., Song, J., Mikusevic, V., Marden, J.J., Becerril, A., Kuang, H., Wang, B.
PDB entry 8uvi: Structure of NaDC3-Succinate complex in Coo-Coo conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2023-11-03
Authors: Li, Y., Wang, D.N., Mindell, J.A., Rice, W.J., Song, J., Mikusevic, V., Marden, J.J., Becerril, A., Kuang, H., Wang, B.
PDB entry 8uvk: CosR DNA bound form II
Classification: DNA BINDING PROTEIN/DNA
Source organism: Campylobacter jejuni; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2023-11-03
Authors: Zhang, Z.
PDB entry 8uvl: Crystal structure of selective IRE1a inhibitor 29 at the enzyme active site
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-11-03
Authors: Kiefer, J.R., Wallweber, H.A., Braun, M.-G., Wei, W., Jiang, F., Wang, W., Rudolph, J., Ashkenazi, A.
PDB entry 8uvm: SARS-CoV-2 papain-like protease (PLpro) complex with covalent inhibitor Jun11313
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-11-03
Authors: Ansari, A., Tan, B., Chopra, A., Ruiz, F.X., Arnold, E., Wang, J.
PDB entry 8uvo: Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC804515)
Classification: MOTOR PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-11-03
Authors: Nandi, P., DeVore, K., Chiu, P.-L.
PDB entry 8uvp: Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC819701/up)
Classification: MOTOR PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-11-03
Authors: Nandi, P., DeVore, K., Chiu, P.-L.
PDB entry 8uvq: Human p97/VCP R155H mutant structure with a triazole inhibitor (NSC819701/down)
Classification: MOTOR PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-11-03
Authors: Nandi, P., DeVore, K., Chiu, P.-L.
PDB entry 8uvr: Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution
Classification: RIBOSOME/INHIBITOR,ANTIBIOTIC
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-11-03
Authors: Killam, B.Y., Phelps, G.A., Lee, R.E., Polikanov, Y.S.
PDB entry 8uvs: Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution
Classification: RIBOSOME/INHIBITOR
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-11-03
Authors: Killam, B.Y., Phelps, G.A., Lee, R.E., Polikanov, Y.S.
PDB entry 8uvt: Structure of the insect gustatory receptor Gr9 from Bombyx mori
Classification: TRANSPORT PROTEIN
Source organism: Bombyx mori
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-11-04
Authors: Gomes, J.V., Butterwick, J.A.
PDB entry 8uvu: Structure of the insect gustatory receptor Gr9 from Bombyx mori in complex with D-fructose
Classification: TRANSPORT PROTEIN
Source organism: Bombyx mori
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-11-04
Authors: Gomes, J.V., Butterwick, J.A.
PDB entry 8uvv: The NanJ sialidase catalytic domain in complex with Neu5Ac
Classification: HYDROLASE
Source organism: Clostridium perfringens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-11-04
Authors: Medley, B.J., Boraston, A.B.
PDB entry 8uvw: Crystal structure of RAD51-BRCA2 Cter complex
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2023-11-05
Authors: Longo, M.A., Perera, R., Tsai, C.-L., Tainer, J.A.
PDB entry 8uvx: CosR DNA bound form I
Classification: DNA BINDING PROTEIN/DNA
Source organism: Campylobacter jejuni; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-11-05
Authors: Zhang, Z.
PDB entry 8uvy: Structure of AKT1(E17K) with compound 3
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2023-11-05
Authors: Craven, G.B., Taunton, J.
PDB entry 8uvz: Bacillus subtilis DHFR bound to NADP+ and folate
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2023-11-05
Authors: Smith, N., Horswill, A.R., Wilson, M.A.
PDB entry 8uw0: Escherichia coli DHFR bound to NADP+ and folate, 17.2 MGy dose
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2023-11-05
Authors: Smith, N., Horswill, A.R., Wilson, M.A.
PDB entry 8uw1: Cryo-EM structure of DNMT3A1 UDR in complex with H2AK119Ub-nucleosome
Classification: GENE REGULATION
Source organism: Escherichia coli 'BL21-Gold(DE3)pLysS AG'; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2023-11-05
Authors: Gretarsson, K., Abini-Agbomson, S., Armache, K.-J., Lu, C.
PDB entry 8uw2: Structure of AKT1(E17K) with compound 3 (zinc-free)
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-11-05
Authors: Craven, G.B., Taunton, J.
PDB entry 8uw3: Human LINE-1 retrotransposon ORF2 protein engaged with template RNA in elongation state
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-11-06
Authors: Thawani, A., Florez Ariza, A.J., Collins, K., Nogales, E.
PDB entry 8uw4: Crystal structure of hydroxyisourate hydrolase from Herbaspirillum seropedicae
Classification: HYDROLASE
Source organism: Herbaspirillum seropedicae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-11-06
Authors: Magalhaes, M.T.Q., Pereira, H.M., Bleicher, L.
PDB entry 8uw6: Acetylornithine deacetylase from Escherichia coli, di-zinc form.
Classification: HYDROLASE
Source organism: Escherichia coli str. K-12 substr. MG1655
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-11-06
Authors: Osipiuk, J., Endres, M., Kelley, E., Becker, D.P., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8uw7: Structure of AKT1(WT) with compound 3
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.972 Å
Deposited: 2023-11-06
Authors: Craven, G.B., Taunton, J.
PDB entry 8uw8: Site-one protease and SPRING
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-11-06
Authors: Kober, D.L.
PDB entry 8uw9: Structure of AKT1(E17K) with compound 4
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-11-06
Authors: Craven, G.B., Taunton, J.
PDB entry 8uwa: VH1-18 QxxV class antibody 09-1B12 bound to A/Perth/16/2009 H3N2 hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Perth/16/2009(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 4.02 Å
Deposited: 2023-11-06
Authors: Maurer, D.P.
PDB entry 8uwb: Crystal structure of PP2A PPP2R1A-PPP2CA-PPP2R5E phosphatase.
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2023-11-06
Authors: Wachter, F., Nowak, R.P., Fischer, E.S.
PDB entry 8uwc: Site-one protease without SPRING
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.27 Å
Deposited: 2023-11-06
Authors: Kober, D.L.
PDB entry 8uwf: NMR structure of the funnel-web spider toxin Hc3a
Classification: TOXIN
Source organism: Hadronyche cerberea
Experimental method: SOLUTION NMR
Deposited: 2023-11-06
Authors: Budusan, E., Payne, C.D., Gonzalez, T.I., Clark, R.J., Rosengren, K.J., Rash, L.D., Cristofori-Armstrong, B.
PDB entry 8uwl: 5-HT2AR bound to Lisuride in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-11-06
Authors: Barros-Alvarez, X., Kim, K., Panova, O., Roth, B.L., Skiniotis, G.
PDB entry 8uwm: FphE, Staphylococcus aureus fluorophosphonate-binding serine hydrolases E, borolane-based compound Q41 bound
Classification: HYDROLASE
Source organism: Staphylococcus aureus subsp. aureus USA300
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-11-06
Authors: Fellner, M.
PDB entry 8uwn: Crystal structure of human CLK1 kinase in complex with compound 3
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-11-07
Authors: Kim, J.L.
PDB entry 8uwp: Crystal structure of SETDB1 Tudor domain in complex with MR46747
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-11-07
Authors: Shrestha, S., Beldar, S., Dong, A., Ackloo, S., Brown, P.J., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 8uwq: Crystal structure of BT1282 GH18-like from Bacteroides thetaiotaomicron VPI-5482
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2023-11-07
Authors: Sastre, D.E., Sultana, N., Navarro, M.V.A.S., Sundberg, E.J.
PDB entry 8uwr: Crystal structure of human ACVR1 (ALK2) kinase in complex with compound 3
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2023-11-07
Authors: Kim, J.L.
PDB entry 8uws: Cryo-EM structure of an Enterobacter GH43 Beta-Xylosidase: EcXyl43
Classification: HYDROLASE
Source organism: Enterobacter hormaechei
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2023-11-08
Authors: Briganti, L., Godoy, A.S., Capetti, C.C.M., Portugal, R.V., Polikarpov, I.
PDB entry 8uwt: A X-ray Crystallographic Structure Model of a Glycoside Hydrolase (GH) Family 39 (GH39)-like Enzyme Encoded within a Xylan Utilization Locus of the pSOL1 Megaplasmid of Clostridium acetobutylicum
Classification: HYDROLASE
Source organism: Clostridium acetobutylicum ATCC 824
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-11-08
Authors: St John, F.J., Fujimoto, Z.
PDB entry 8uwu: EmrE structure in the proton-bound state (WT/L51I heterodimer)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: SOLUTION NMR, SOLID-STATE NMR
Deposited: 2023-11-08
Authors: Li, J., Sae Her, A., Besch, A., Ramirez, B., Crames, M., Banigan, J.R., Mueller, C., Marsiglia, W.M., Zhang, Y., Traaseth, N.J.
PDB entry 8uwv: Crystal structure of BT3984 SusD-like from Bacteroides thetaiotaomicron VPI-5482 at 1.1 A resolution (Space group P21)
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2023-11-08
Authors: Sastre, D.E., Navarro, M.V.A.S., Sundberg, E.J.
PDB entry 8uww: The structure of the native cardiac thin filament troponin core in Ca2+-free state from the upper strand
Classification: MOTOR PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.1 Å
Deposited: 2023-11-08
Authors: Galkin, V.E., Risi, C.M.
PDB entry 8uwx: The structure of the native cardiac thin filament troponin core in Ca2+-free tilted state from the upper strand
Classification: MOTOR PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2023-11-08
Authors: Galkin, V.E., Risi, C.M.
PDB entry 8uwy: The structure of the native cardiac thin filament troponin core in Ca2+-free rotated state from the upper strand
Classification: MOTOR PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.5 Å
Deposited: 2023-11-08
Authors: Galkin, V.E., Risi, C.M.
PDB entry 8uwz: The structure of Raamsizumab in complex with VEGF121
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-11-08
Authors: Singer, A.U., Bruce, H., Blazer, L., Sicheri, F., Adams, J.J., Sidhu, S.S.
PDB entry 8ux1: Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
Classification: NUCLEAR PROTEIN
Source organism: Drosophila melanogaster; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-11-08
Authors: Huang, S.K., Rubinstein, J.L., Kay, L.E.
PDB entry 8ux2: Chromobacterium violaceum mono-ADP-ribosyltransferase CteC in complex with NAD+
Classification: TRANSFERASE
Source organism: Chromobacterium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-11-08
Authors: Zhang, Z., Rondon, H., Das, C.
PDB entry 8ux4: Mitochondrial ribosome of saccharomyces cerevisiae class II from YEP with Dextrose culture
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-11-08
Authors: Yu, Z., Zheng, F., Zhou, C.
PDB entry 8ux5: OvsA M401Y/Q430N/A431F from Halomonas utahensis, a hercynine-binding variant with selenoneine-biosynthetic activity
Classification: OXIDOREDUCTASE
Source organism: Halomonas utahensis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2023-11-08
Authors: Ireland, K.A., Davis, K.M.
PDB entry 8ux6: Structure of Fab201 with a T. parva sporozoite neutralizing B cell epitope of p67
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-08
Authors: Singer, A.U., Gopalsamy, A., Fellouse, F.A., Miersch, S., Sidhu, S.S.
PDB entry 8ux7: Dioclea megacarpa lectin (DmegA) complexed with X-Man
Classification: SUGAR BINDING PROTEIN
Source organism: Macropsychanthus megacarpus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-11-09
Authors: Oliveira, M.V., De Sloover, G., Osterne, V.J.S., Pinto-Junior, V.R., Sacramento-Neto, J.C., Van Damme, E.J.M., Nascimento, K.S., Cavada, B.S.
PDB entry 8ux8: E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-11-09
Authors: Kimbrough, E.M., Dunham, C.M., Nguyen, H.A.
PDB entry 8ux9: Asymmetric unit of the PARIS Immune Complex at 3.2 Angstrom Resolution
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli B185
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-11-09
Authors: Burman, N.B., Henriques, W., Wilkinson, R., Graham, A., Wiedenheft, B.
PDB entry 8uxa: Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-11-09
Authors: Yu, Z., Zheng, F., Zhou, C.
PDB entry 8uxb: E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-11-09
Authors: Kimbrough, E.M., Dunham, C.M., Nguyen, H.A.
PDB entry 8uxc: Structure of PKA phosphorylated human RyR2-R420Q in the primed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-11-09
Authors: Miotto, M.C., Marks, A.R.
PDB entry 8uxe: Structure of PKA phosphorylated human RyR2-R420Q in the closed state in the presence of ARM210
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2023-11-09
Authors: Miotto, M.C., Marks, A.R.
PDB entry 8uxf: Structure of PKA phosphorylated human RyR2-R420W in the primed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-11-09
Authors: Miotto, M.C., Marks, A.R.
PDB entry 8uxg: Structure of PKA phosphorylated human RyR2-R420W in the closed state in the presence of ARM210
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2023-11-09
Authors: Miotto, M.C., Marks, A.R.
PDB entry 8uxh: Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2023-11-09
Authors: Miotto, M.C., Marks, A.R.
PDB entry 8uxi: Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-11-09
Authors: Miotto, M.C., Marks, A.R.
PDB entry 8uxj: Caulobacter crescentus FljK flagellar filament (asymmetrical)
Classification: STRUCTURAL PROTEIN
Source organism: Caulobacter vibrioides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2023-11-09
Authors: Sanchez, J.C., Montemayor, E.J., Ploscariu, N.T., Parrell, D., Baumgardt, J.K., Yang, J.E., Sibert, B., Cai, K., Wright, E.R.
PDB entry 8uxk: Caulobacter crescentus FljL flagellar filament (asymmetrical)
Classification: STRUCTURAL PROTEIN
Source organism: Caulobacter vibrioides
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2023-11-09
Authors: Sanchez, J.C., Montemayor, E.J., Ploscariu, N.T., Parrell, D., Baumgardt, J.K., Yang, J.E., Sibert, B., Cai, K., Wright, E.R.
PDB entry 8uxl: Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium and calmodulin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-11-09
Authors: Miotto, M.C., Marks, A.R.
PDB entry 8uxm: Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium and calmodulin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2023-11-09
Authors: Miotto, M.C., Marks, A.R.
PDB entry 8uxn: Caulobacter crescentus FljM flagellar filament (symmetrized)
Classification: STRUCTURAL PROTEIN
Source organism: Caulobacter vibrioides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.11 Å
Deposited: 2023-11-09
Authors: Sanchez, J.C., Montemayor, E.J., Ploscariu, N.T., Parrell, D., Baumgardt, J.K., Yang, J.E., Sibert, B., Cai, K., Wright, E.R.
PDB entry 8uxq: Structure of Heterochromatin Protein 1 (HP1) alpha in complex with an H2A.Z nucleosome
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2023-11-09
Authors: Tan, D., Sokolova, V.
PDB entry 8uxr: TxVIIB,U-superfamily conotoxin
Classification: TOXIN
Source organism: Conus textile
Experimental method: SOLUTION NMR
Deposited: 2023-11-09
Authors: Raffaelli, T., Daly, N.
PDB entry 8uxs: KLHDC2 ubiquitin ligase in complex with a novel small-molecule
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-10
Authors: Rusnac, D.V., Zheng, N.