LiteFold/PDB huggingface dataset:
PDB entry 5vmp: Crystal Structure of Human KDM4 with Small Molecule Inhibitor QC5714
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2017-04-28
Authors: Hosfield, D.J.
PDB entry 5vmq: STRUCTURE OF THE R105A MUTANT CATALYTIC TRIMER OF ESCHERICHIA COLI ASPARTATE TRANSCARBAMOYLASE AT 2.0-A RESOLUTION
Classification: TRANSFERASE
Source organism: Escherichia coli O45:K1 (strain S88 / ExPEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.012 Å
Deposited: 2017-04-28
Authors: Beernink, P.T., Endrizzi, J.A.
PDB entry 5vmr: Receptor binding domain of BoNT/B in complex with mini-protein binder Bot.2110.4
Classification: TOXIN
Source organism: Clostridium botulinum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-04-28
Authors: Jin, R., Lam, K., Yao, G.
PDB entry 5vms: CryoEM structure of Xenopus KCNQ1 channel
Classification: TRANSPORT PROTEIN, CALCIUM BINDING PROTEIN
Source organism: Homo sapiens; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2017-04-28
Authors: Mackinnon, R., Sun, J.
PDB entry 5vmt: Crystal structure of a glyceraldehyde-3-phosphate dehydrogenase from Neisseria gonorrhoeae bound to NAD
Classification: OXIDOREDUCTASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-04-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vmu: Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a double CpG-methylated DNA resembling the specific Kaiso binding sequence (KBS)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.346 Å
Deposited: 2017-04-28
Authors: Nikolova, E.N., Stanfield, R.L., Martinez-Yamout, M.A., Dyson, H.J., Wright, P.E.
PDB entry 5vmv: Kaiso (ZBTB33) zinc finger DNA binding domain in complex with its double CpG-methylated DNA consensus binding site
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.313 Å
Deposited: 2017-04-28
Authors: Nikolova, E.N., Stanfield, R.L., Martinez-Yamout, M.A., Dyson, H.J., Wright, P.E.
PDB entry 5vmw: Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a double CpG-methylated DNA resembling the specific Kaiso binding sequence (KBS)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.397 Å
Deposited: 2017-04-28
Authors: Nikolova, E.N., Stanfield, R.L., Martinez-Yamout, M.A., Dyson, H.J., Wright, P.E.
PDB entry 5vmx: Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a hemi CpG-methylated DNA resembling the specific Kaiso binding sequence (KBS)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2017-04-28
Authors: Nikolova, E.N., Stanfield, R.L., Martinez-Yamout, M.A., Dyson, H.J., Wright, P.E.
PDB entry 5vmy: Kaiso (ZBTB33) zinc finger DNA binding domain in complex with a hemi CpG-methylated DNA resembling the specific Kaiso binding sequence (KBS)
Classification: Transcription/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2017-04-28
Authors: Nikolova, E.N., Stanfield, R.L., Martinez-Yamout, M.A., Dyson, H.J., Wright, P.E.
PDB entry 5vmz: Kaiso (ZBTB33) E535Q mutant zinc finger DNA binding domain in complex with a double CpG-methylated DNA resembling the specific Kaiso binding sequence (KBS)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.319 Å
Deposited: 2017-04-28
Authors: Nikolova, E.N., Stanfield, R.L., Martinez-Yamout, M.A., Dyson, H.J., Wright, P.E.
PDB entry 5vn0: Water-forming NADH oxidase from Lactobacillus brevis (LbNOX) bound to NADH.
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus brevis (strain ATCC 367 / JCM 1170)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2017-04-28
Authors: Cracan, V., Grabarek, Z.
PDB entry 5vn1: horse liver alcohol dehydrogenae complexed with NADH (R,S)-N-1-methylhexylformamide
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2017-04-28
Authors: Plapp, B.V., Ramaswamy, S., Ferraro, D.J., Baskar Raj, S.
PDB entry 5vn2: Crystal structure of 3-oxoacyl-[acyl-carrier protein] reductase from Brucella melitensis in complex with NAD
Classification: OXIDOREDUCTASE
Source organism: Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-04-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vn3: Cryo-EM model of B41 SOSIP.664 in complex with soluble CD4 (D1-D2) and fragment antigen binding variable domain of 17b
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2017-04-28
Authors: Ozorowski, G., Pallesen, J., Ward, A.B.
PDB entry 5vn4: Crystal structure of adenine phosphoribosyl transferase from Trypanosoma brucei in complex with AMP, pyrophosphate, and ribose-5-phosphate
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2017-04-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vn5: Crystal structure of LigY from Sphingobium sp. strain SYK-6
Classification: HYDROLASE
Source organism: Sphingobium sp. SYK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-04-28
Authors: Kuatsjah, E., Chan, A.C.K., Kobylarz, M.J., Murphy, M.E.P., Eltis, L.D.
PDB entry 5vn6: Crystal structure of Taurine dioxygenase from Burkholderia ambifaria
Classification: OXIDOREDUCTASE
Source organism: Burkholderia ambifaria (strain MC40-6)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-04-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vn7: Structure of bacteriorhodopsin from crystals grown at 20 deg Celcius using GlyNCOC15+4 as an LCP host lipid
Classification: MEMBRANE PROTEIN
Source organism: Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-04-28
Authors: Ishchenko, A., Peng, L., Zinovev, E., Vlasov, A., Lee, S.C., Kuklin, A., Mishin, A., Borshchevskiy, V., Zhang, Q., Cherezov, V.
PDB entry 5vn8: Cryo-EM model of B41 SOSIP.664 in complex with fragment antigen binding variable domain of b12
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2017-04-28
Authors: Ozorowski, G., Pallesen, J., Ward, A.B., Cottrell, C.A.
PDB entry 5vn9: Structure of bacteriorhodopsin from crystals grown at 4 deg C using GlyNCOC15+4 as an LCP host lipid
Classification: MEMBRANE PROTEIN
Source organism: Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.594 Å
Deposited: 2017-04-28
Authors: Ishchenko, A., Peng, L., Zinovev, E., Vlasov, A., Lee, S.C., Kuklin, A., Mishin, A., Borshchevskiy, V., Zhang, Q., Cherezov, V.
PDB entry 5vna: Crystal structure of human YEATS domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-04-29
Authors: Cho, H.J., Cierpicki, T.
PDB entry 5vnb: YEATS in complex with histone H3
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-04-29
Authors: Cho, H.J., Cierpicki, T.
PDB entry 5vnc: Glycogen synthase in complex with UDP and glucosamine
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2017-04-30
Authors: Mahalingan, K.K., Hurley, T.D.
PDB entry 5vnd: Crystal structure of FGFR1-Y563C (FGFR4 surrogate) covalently bound to H3B-6527
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-04-30
Authors: Tsai, J.H.C., Reynolds, D., Fekkes, P., Smith, P., Larsen, N.A.
PDB entry 5vne: Crystal structure of Sec23a/Sec24a/Sec22 complexed with Emp24 sorting motif
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.698 Å
Deposited: 2017-04-30
Authors: Ma, W., Goldberg, J.
PDB entry 5vnf: Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal VV sorting motif
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.407 Å
Deposited: 2017-04-30
Authors: Ma, W., Goldberg, J.
PDB entry 5vng: Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal II sorting motif
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-04-30
Authors: Ma, W., Goldberg, J.
PDB entry 5vnh: Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal SV sorting motif
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-04-30
Authors: Ma, W., Goldberg, J.
PDB entry 5vni: Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal FA sorting motif
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.788 Å
Deposited: 2017-04-30
Authors: Ma, W., Goldberg, J.
PDB entry 5vnj: Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal FF sorting motif (ERGIC-53)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.806 Å
Deposited: 2017-04-30
Authors: Ma, W., Goldberg, J.
PDB entry 5vnk: Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal LL sorting motif
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2017-04-30
Authors: Ma, W., Goldberg, J.
PDB entry 5vnl: Crystal structure of Sec23a/Sec24a/Sec22 complexed with 4-phenylbutyric acid (1mM soaking)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.394 Å
Deposited: 2017-04-30
Authors: Ma, W., Goldberg, J.
PDB entry 5vnm: Crystal structure of Sec23a/Sec24a/Sec22 complexed with 4-phenylbutyric acid (15mM soaking)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.765 Å
Deposited: 2017-04-30
Authors: Ma, W., Goldberg, J.
PDB entry 5vnn: Crystal structure of Sec23a/Sec24a/Sec22 complexed with 4-phenylbutyric acid (50mM soaking)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2017-05-01
Authors: Ma, W., Goldberg, J.
PDB entry 5vno: Crystal structure of Sec23a/Sec24a/Sec22
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.905 Å
Deposited: 2017-05-01
Authors: Ma, W., Goldberg, J.
PDB entry 5vnp: X-ray crystal structure of Halotag bound to the P1 benzoxadiazole fluorogenic ligand
Classification: HYDROLASE
Source organism: Rhodococcus rhodochrous
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2017-05-01
Authors: Dunham, N.P., Boal, A.K.
PDB entry 5vnq: Neutron crystallographic structure of perdeuterated T4 lysozyme cysteine-free pseudo-wild type at cryogenic temperature
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: NEUTRON DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-05-01
Authors: Li, L., Shukla, S., Meilleur, F., Standaert, R.F., Pierce, J., Myles, D.A.A., Cuneo, M.J.
PDB entry 5vnr: X-ray structure of perdeuterated T4 lysozyme cysteine-free pseudo-wild type at cryogenic temperature
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.631 Å
Deposited: 2017-05-01
Authors: Li, L., Shukla, S., Meilleur, F., Standaert, R.F., Pierce, J., Myles, D.A.A., Cuneo, M.J.
PDB entry 5vns: M.tb Antigen 85C Acyl-Enzyme Intermediate with Tetrahydrolipstatin
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2017-05-01
Authors: Goins, C.M., Ronning, D.R.
PDB entry 5vnt: Solution NMR Structure of the C-terminal Headpiece Domain of Villin 4 from A.thaliana, the First Non-Vertebrate Headpiece Structure
Classification: PROTEIN BINDING
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 2017-05-01
Authors: Miears, H.L., Smirnov, S.L.
PDB entry 5vnu: Nonheme Iron Replacement in a Biosynthetic Nitric Oxide Reductase Model Performing O2 Reduction to Water: Mn-bound FeBMb
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.584 Å
Deposited: 2017-05-01
Authors: Reed, J., Shi, Y., Zhu, Q., Chakraborty, S., Mirs, E.N., Petrik, I.D., Bhagi-Damodaran, A., Ross, M., Moenne-Loccoz, P., Zhang, Y., Lu, Y.
PDB entry 5vnv: Crystal structure of Nb.b201
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2017-05-01
Authors: Kruse, A.C., McMahon, C.
PDB entry 5vnw: Crystal structure of Nb.b201 bound to human serum albumin
Classification: TRANSPORT PROTEIN/DE NOVO PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-05-01
Authors: McMahon, C., Kruse, A.C.
PDB entry 5vnx: Crystal structure of an 8-amino-7-oxononanoate synthase from Burkholderia multivorans with a potential glycine-PLP-Lys242 cyclized intermediate or byproduct
Classification: TRANSFERASE
Source organism: Burkholderia multivorans (strain ATCC 17616 / 249)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2017-05-01
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vny: Crystal structure of DM14-3 domain of Lgd
Classification: ENDOCYTOSIS, PROTEIN BINDING
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.101 Å
Deposited: 2017-05-01
Authors: McMillan, B.J., Blacklow, S.C.
PDB entry 5vnz: Structure of a TRAF6-Ubc13~Ub complex
Classification: TRANSFERASE
Source organism: Danio rerio; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2017-05-01
Authors: Middleton, A.J., Day, C.L.
PDB entry 5vo0: Structure of a TRAF6-Ubc13~Ub complex
Classification: TRANSFERASE
Source organism: Danio rerio; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2017-05-01
Authors: Middleton, A.J., Day, C.L.
PDB entry 5vo1: DLK in complex with compound 10 (5-(1-isopropyl-5-(3-(oxetan-3-yl)-3-azabicyclo[3.1.0]hexan-6-yl)-1H-pyrazol-3-yl)-3-(trifluoromethyl)pyridin-2-amine)
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2017-05-01
Authors: HARRIS, S.F., YIN, J.
PDB entry 5vo2: DLK in complex with inhibitor 5-(1-isopropyl-5-(1-(oxetan-3-yl)piperidin-4-yl)-1H-pyrazol-3-yl)-3-(trifluoromethyl)pyridin-2-amine (compound 7)
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2017-05-01
Authors: HARRIS, S.F., YIN, J.
PDB entry 5vo3: Crystal structure of DapE in complex with the products (succinic acid and diaminopimelic acid)
Classification: HYDROLASE
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.954 Å
Deposited: 2017-05-01
Authors: Nocek, B.
PDB entry 5vo4: Crystal Structure Of The Androgen Receptor Ligand Binding Domain In Complex With 5-(2-fluoro-4-hydroxyphenyl)-1-methyl-1H-pyrrole-2-carbonitrile
Classification: HORMONE RECEPTOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2017-05-02
Authors: Parris, K., Unwalla, R.
PDB entry 5vo5: Crystal structure of Lgd-Shrub complex, single chain fusion
Classification: TRANSPORT PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.004 Å
Deposited: 2017-05-02
Authors: McMillan, B.J., Seegar, T.C.M., Blacklow, S.C.
PDB entry 5vo6: CRYSTAL STRUCTURE OF JAK3 KINASE DOMAIN IN COMPLEX WITH A PYRROLOPYRIDAZINE INHIBITOR
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2017-05-02
Authors: Sack, J.S.
PDB entry 5vo7: NMR Assignment and Structure of Thioredoxin (Rv1471 ortholog) from Mycobacterium smegmatis ATCC 700084 / mc(2)155
Classification: ELECTRON TRANSPORT
Source organism: Mycobacterium smegmatis
Experimental method: SOLUTION NMR
Deposited: 2017-05-02
Authors: Barnwal, R.P., Varani, G., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vo8: X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter
Classification: transcription/DNA/RNA
Source organism: Thermus thermophilus; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2017-05-02
Authors: Murakami, K.S., Shin, Y., Turnbough Jr, C.L., Molodtsov, V.
PDB entry 5vob: Crystal structure of HCMV Pentamer in complex with neutralizing antibody 8I21
Classification: Viral Protein/Immune System
Source organism: Homo sapiens; Human cytomegalovirus; Human cytomegalovirus (strain 5508); Human cytomegalovirus (strain AD169); Human cytomegalovirus (strain Merlin)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2017-05-02
Authors: Malito, E., Chandramouli, S.
PDB entry 5voc: Crystal structure of HCMV Pentamer in complex with neutralizing antibody 8I21 - Low resolution dataset for initial phasing by SAD
Classification: Viral Protein/Immune System
Source organism: Homo sapiens; Human cytomegalovirus; Human cytomegalovirus (strain 5508); Human cytomegalovirus (strain AD169); Human cytomegalovirus (strain Merlin)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.99 Å
Deposited: 2017-05-02
Authors: Malito, E., Chandramouli, S.
PDB entry 5vod: Crystal structure of HCMV Pentamer in complex with neutralizing antibody 9I6
Classification: Viral Protein/Immune System
Source organism: Homo sapiens; Human cytomegalovirus; Human cytomegalovirus (strain 5508); Human cytomegalovirus (strain AD169); Human cytomegalovirus (strain Merlin)
Experimental method: X-RAY DIFFRACTION
Resolution: 5.9 Å
Deposited: 2017-05-02
Authors: Malito, E., Chandramouli, S.
PDB entry 5voe: DesGla-XaS195A Bound to Aptamer 11F7t
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-05-02
Authors: Gunaratne, R., Kumar, S., Frederiksen, J.W., Stayrook, S., Lohrmann, J.L., Perry, K., Chabata, C.V., Thalji, N.K., Ho, M.D., Arepally, G., Camire, R.M., Krishnaswamy, S.K., Sullenger, B.A.
PDB entry 5vof: DesGla-XaS195A Bound to Aptamer 11F7t and Rivaroxaban
Classification: HYDROLASE/HYDROLASE INHIBITOR/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2017-05-02
Authors: Krishnaswamy, S., Kumar, S.
PDB entry 5vog: Crystal Structure of a Hypothetical Protein from Neisseria gonorrhoeae with bound ppGpp
Classification: TRANSFERASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-05-02
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5voh: Crystal structure of engineered water-forming NADPH oxidase (TPNOX) bound to NADPH. The G159A, D177A, A178R, M179S, P184R mutant of LbNOX.
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus brevis KB290
Experimental method: X-RAY DIFFRACTION
Resolution: 2.302 Å
Deposited: 2017-05-02
Authors: Cracan, V., Grabarek, Z.
PDB entry 5voi: X-ray crystal structure of bacterial RNA polymerase and pyrG promoter complex
Classification: transcription/dna/rna
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039); Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-05-02
Authors: Murakami, K.S., Shin, Y., Turnbough Jr, C.L., Molodtsov, V.
PDB entry 5voj: Crystal structure of HCV NS3/4A protease in complex with JZ01-15, an analogue of 5172-mcP1P3
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Hepatitis C virus subtype 1a
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2017-05-03
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 5vok: Crystal structure of the C7orf59-HBXIP dimer
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2017-05-03
Authors: Rasheed, N., Nascimento, A.F.Z., Bar-Peled, L., Shen, K., Sabatini, D.M., Aparicio, R., Smetana, J.H.C.
PDB entry 5vol: Bacint_04212 ferulic acid esterase
Classification: HYDROLASE
Source organism: Bacteroides intestinalis DSM 17393
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2017-05-03
Authors: Koropatkin, N.M., Cann, I., Mackie, R.I.
PDB entry 5vom: Benzopiperazine BET bromodomain inhibitor in complex with BD1 of Brd4
Classification: Transcription/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2017-05-03
Authors: Toms, A.V., Herbertz, T.
PDB entry 5von: Methionine synthase folate-binding domain from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-05-03
Authors: Yamada, K., Koutmos, M.
PDB entry 5voo: Methionine synthase folate-binding domain with methyltetrahydrofolate from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-05-03
Authors: Koutmos, M., Yamada, K.
PDB entry 5vop: Methionine synthase folate-binding domain from Thermus thermophilus HB8 native
Classification: TRANSFERASE
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-05-03
Authors: Koutmos, M., Yamada, K.
PDB entry 5vos: VGSNKGAIIGL from Amyloid Beta determined by MicroED
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.42 Å
Deposited: 2017-05-03
Authors: Rodriguez, J.A., Sawaya, M.R., Cascio, D., Eisenberg, D.S., Griner, S.L., Gonen, T.
PDB entry 5vot: Structure of AMPA receptor-TARP complex
Classification: membrane protein, metal transport
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2017-05-03
Authors: Chen, S., Zhao, Y., Wang, Y.S., Shekhar, M., Tajkhorshid, E., Gouaux, E.
PDB entry 5vou: Structure of AMPA receptor-TARP complex
Classification: membrane protein, metal transport
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.4 Å
Deposited: 2017-05-03
Authors: Chen, S., Zhao, Y., Wang, Y.S., Shekhar, M., Tajkhorshid, E., Gouaux, E.
PDB entry 5vov: Structure of AMPA receptor-TARP complex
Classification: membrane protein, metal transport
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.7 Å
Deposited: 2017-05-03
Authors: Zhao, Y., Chen, S., Wang, Y.S., Shekhar, M., Tajkhorshid, E., Gouaux, E.
PDB entry 5vox: Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 1)
Classification: HYDROLASE
Source organism: Legionella pneumophila subsp. pneumophila ATCC 43290; Saccharomyces cerevisiae; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.8 Å
Deposited: 2017-05-03
Authors: Zhao, J.
PDB entry 5voy: Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 2)
Classification: HYDROLASE
Source organism: Legionella pneumophila subsp. pneumophila ATCC 43290; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.9 Å
Deposited: 2017-05-03
Authors: Zhao, J.
PDB entry 5voz: Yeast V-ATPase in complex with Legionella pneumophila effector SidK (rotational state 3)
Classification: HYDROLASE
Source organism: Legionella pneumophila subsp. pneumophila ATCC 43290; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.6 Å
Deposited: 2017-05-03
Authors: Zhao, J.
PDB entry 5vp0: Discovery of Clinical Candidate N-{(1S)-1-[3-Fluoro-4-(trifluoromethoxy)phenyl]-2-methoxyethyl}-7-methoxy-2-oxo-2,3-dihydropyrido[2,3-b]pyrazine-4(1H)-carboxamide (TAK-915), A Highly Potent, Selective, and Brain-Penetrating Phosphodiesterase 2A Inhibitor for the Treatment of Cognitive Disorders
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-05-03
Authors: Hoffman, I.D.
PDB entry 5vp1: Discovery of Clinical Candidate N-{(1S)-1-[3-Fluoro-4-(trifluoromethoxy)phenyl]-2-methoxyethyl}-7-methoxy-2-oxo-2,3-dihydropyrido[2,3-b]pyrazine-4(1H)-carboxamide (TAK-915), A Highly Potent, Selective, and Brain-Penetrating Phosphodiesterase 2A Inhibitor for the Treatment of Cognitive Disorders
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2017-05-03
Authors: Hoffman, I.D.
PDB entry 5vp2: Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-05-04
Authors: Osterman, I.A., Khabibullina, N.F., Komarova, E.S., Kasatsky, P., Kartsev, V.G., Bogdanov, A.A., Dontsova, O.A., Konevega, A.L., Sergiev, P.V., Polikanov, Y.S.
PDB entry 5vp3: Light-sensitive photoprotein
Classification: LUMINESCENT PROTEIN
Source organism: Mnemiopsis leidyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.151 Å
Deposited: 2017-05-04
Authors: Gorman, M.A., Parker, M.W.
PDB entry 5vp5: Crystal structure of a 3-oxoacyl-acyl-carrier protein reductase FabG4 from Mycobacterium smegmatis bound to NAD
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-05-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vp7: Crystal structure of human KRAS G12A mutant in complex with GDP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-05-04
Authors: Xu, S., Long, B., Boris, G., Chen, A., Ni, S., Kennedy, M.A.
PDB entry 5vp8: I38T mutant of 2009 H1N1 PA Endonuclease
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-05-04
Authors: Kumar, G., White, S.W.
PDB entry 5vp9: Crystal structure of HCV NS3/4A protease in complex with AM-07, an analogue of 5172-mcP1P3
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Hepatitis C virus subtype 1a
Experimental method: X-RAY DIFFRACTION
Resolution: 1.859 Å
Deposited: 2017-05-04
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 5vpa: Transcription factor FosB/JunD bZIP domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2017-05-04
Authors: Yin, Z., Machius, M., Rudenko, G.
PDB entry 5vpb: Transcription factor FosB/JunD bZIP domain in its oxidized form, type-I crystal
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.691 Å
Deposited: 2017-05-04
Authors: Yin, Z., Machius, M., Rudenko, G.
PDB entry 5vpc: Transcription factor FosB/JunD bZIP domain in its oxidized form, type-II crystal
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.498 Å
Deposited: 2017-05-04
Authors: Yin, Z., Machius, M.C., Rudenko, G.
PDB entry 5vpd: Transcription factor FosB/JunD bZIP domain in its oxidized form, type-III crystal
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2017-05-04
Authors: Yin, Z., Machius, M., Rudenko, G.
PDB entry 5vpe: Transcription factor FosB/JunD bZIP domain in complex with cognate DNA, type-I crystal
Classification: transcription/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.053 Å
Deposited: 2017-05-04
Authors: Yin, Z., Machius, M., Rudenko, G.
PDB entry 5vpf: Transcription factor FosB/JunD bZIP domain in complex with cognate DNA, type-II crystal
Classification: transcription/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.694 Å
Deposited: 2017-05-04
Authors: Yin, Z., Rudenko, G., Machius, M.
PDB entry 5vpg: CRYSTAL STRUCTURE OF DER P 1 COMPLEXED WITH FAB 4C1
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Dermatophagoides pteronyssinus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-05-05
Authors: Chruszcz, M., Vailes, L.D., Chapman, M.D., Pomes, A., Minor, W.
PDB entry 5vph: CRYSTAL STRUCTURE OF DER P 1 COMPLEXED WITH FAB 4C1
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Dermatophagoides pteronyssinus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-05-05
Authors: Chruszcz, M., Vailes, L.D., Chapman, M.D., Pomes, A., Minor, W.
PDB entry 5vpi: Crystal structure of human KRAS G12A mutant in complex with GTP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2017-05-05
Authors: Xu, S., Long, B., Boris, G., Ni, S., Kennedy, M.A.
PDB entry 5vpj: The crystal structure of a thioesterase from Actinomadura verrucosospora
Classification: HYDROLASE
Source organism: Actinomadura verrucosospora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2017-05-05
Authors: Tan, K., Joachimiak, G., Endres, M., Phillips Jr., G.N., Joachmiak, A., Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
PDB entry 5vpk: CRYSTAL STRUCTURE OF MITE ALLERGEN DER F 1
Classification: HYDROLASE
Source organism: Dermatophagoides farinae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-05-05
Authors: Chruszcz, M., Chapman, M.D., Vailes, L.D., Pomes, A., Minor, W.
PDB entry 5vpl: CRYSTAL STRUCTURE OF DER F 1 COMPLEXED WITH FAB 4C1
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Dermatophagoides farinae; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-05-05
Authors: Chruszcz, M., Vailes, L.D., Chapman, M.D., Pomes, A., Minor, W.
PDB entry 5vpm: Crystal Structure of Human Renin in Complex with a biphenylpipderidinylcarbinol
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2017-05-05
Authors: Concha, N., Zhao, B.
PDB entry 5vpn: E. coli Quinol fumarate reductase FrdA E245Q mutation
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli; Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.2232 Å
Deposited: 2017-05-05
Authors: Starbird, C.A., Maklashina, E., Sharma, P., Qualls-Histed, S., Cecchini, G., Iverson, T.M.
PDB entry 5vpo: The 70S P-site ASL SufA6 complex
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.34 Å
Deposited: 2017-05-05
Authors: Hong, S., Sunita, S., Dunkle, J.A., Maehigashi, T., Dunham, C.M.
PDB entry 5vpp: The 70S P-site tRNA SufA6 complex
Classification: RIBOSOME
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2017-05-05
Authors: Hong, S., Sunita, S., Dunkle, J.A., Maehigashi, T., Dunham, C.M.
PDB entry 5vpq: Crystal structure of beta-lactamase from Burkholderia phymatum
Classification: HYDROLASE
Source organism: Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2017-05-05
Authors: SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vpr: Crystal Structure of Cysteine desulfurase from Elizabethkingia anophelis with covalently bound pyridoxal phosphate
Classification: TRANSFERASE
Source organism: Elizabethkingia anophelis NUHP1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2017-05-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vps: Crystal structure of an SDR from Burkholderia ambifaria in complex with NADPH with a TCEP adduct
Classification: OXIDOREDUCTASE
Source organism: Burkholderia ambifaria (strain MC40-6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2017-05-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vpt: 2009 H1N1 PA Endonuclease in complex with RO-7
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-05-05
Authors: Kumar, G., White, S.W.
PDB entry 5vpu: Crystal Structure of 2,3-bisphosphoglycerate-independent phosphoglycerate mutase bound to 3-phosphoglycerate, from Acinetobacter baumannii
Classification: ISOMERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-05-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vpv: Crystal structure of Apo Cryptococcus neoformans H99 Acetyl-CoA Synthetase with an Acetylated Active Site Lysine
Classification: LIGASE
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-05-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID), Fox III, D., Davies, D.R., Calhoun, B.
PDB entry 5vpw: Nitrogenase Cp1 at pH 5
Classification: OXIDOREDUCTASE
Source organism: Clostridium pasteurianum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2017-05-05
Authors: Morrison, C.N., Spatzal, T., Rees, D.C.
PDB entry 5vpx: I38T mutant of 2009 H1N1 PA Endonuclease in complex with RO-7
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.303 Å
Deposited: 2017-05-06
Authors: Kumar, G., White, S.W.
PDB entry 5vpy: Crystal structure of human KRAS G12A mutant in complex with GppNHp
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-05-06
Authors: Xu, S., Long, B., Boris, G., Ni, S., Kennedy, M.A.
PDB entry 5vpz: Crystal structure of human KRAS G12A mutant in complex with GTP-gamma-S
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2017-05-06
Authors: Xu, S., Long, B., Boris, G., Ni, S., Kennedy, M.A.
PDB entry 5vq0: Crystal structure of human KRAS G12A mutant in complex with GDP (EDTA soaked)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-05-06
Authors: Xu, S., Long, B., Boris, G., Ni, S., Kennedy, M.A.
PDB entry 5vq1: Crystal structure of human KRAS Q61A mutant in complex with GDP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2017-05-07
Authors: Xu, S., Long, B., Boris, G., Ni, S., Kennedy, M.A.
PDB entry 5vq2: Crystal structure of human WT-KRAS in complex with GTP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2017-05-07
Authors: Xu, S., Long, B., Boris, G., Ni, S., Kennedy, M.A.
PDB entry 5vq3: Nitrogenase Cp1 at pH 6.5
Classification: OXIDOREDUCTASE
Source organism: Clostridium pasteurianum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2017-05-07
Authors: Morrison, C.N., Spatzal, T., Rees, D.C.
PDB entry 5vq4: Nitrogenase Av1 at pH 5
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-05-07
Authors: Morrison, C.N., Spatzal, T., Rees, D.C.
PDB entry 5vq5: Crystal Structure of the Lectin Domain From the F17-like Adhesin, UclD
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-05-08
Authors: Klein, R.D., Spaulding, C.N., Dodson, K.W., Pinkner, J.S., Hultgren, S.J., Fremont, D.
PDB entry 5vq6: Crystal structure of human WT-KRAS in complex with GTP-gamma-S
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2017-05-08
Authors: Xu, S., Long, B., Boris, G., Ni, S., Kennedy, M.A.
PDB entry 5vq8: Crystal structure of human WT-KRAS in complex with GDP (EDTA soaked)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-05-08
Authors: Xu, S., Long, B., Boris, G., Ni, S., Kennedy, M.A.
PDB entry 5vq9: Structure of human TRIP13, Apo form
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2017-05-08
Authors: Ye, Q., Corbett, K.D.
PDB entry 5vqa: Structure of human TRIP13, ATP-bound form
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2017-05-08
Authors: Ye, Q., Corbett, K.D.
PDB entry 5vqb: Crystal structure of rifampin monooxygenase from Streptomyces venezuelae, complex with FAD
Classification: OXIDOREDUCTASE
Source organism: Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.391 Å
Deposited: 2017-05-08
Authors: Cox, G., Kelso, J., Stogios, P.J., Savchenko, A., Anderson, W.F., Wright, G.D., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5vqd: Beta-glucoside phosphorylase BglX
Classification: HYDROLASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-05-08
Authors: Patel, A., Mark, B.L.
PDB entry 5vqe: Beta-glucoside phosphorylase BglX bound to 2FGlc
Classification: HYDROLASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.889 Å
Deposited: 2017-05-08
Authors: Patel, A., Mark, B.L.
PDB entry 5vqf: Crystal Structure of pro-TGF-beta 1
Classification: PROTEIN BINDING
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2017-05-08
Authors: Zhao, B., Xu, S., Dong, X., Lu, C., Springer, T.A.
PDB entry 5vqg: Crystal structure of the extended Tudor domain from BmPAPI
Classification: RNA BINDING PROTEIN
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-05-08
Authors: Hubbard, P.A., Pan, X., Ohtaki, A., McNally, R., Honda, S., Kirino, Y., Murali, R.
PDB entry 5vqh: Crystal structure of the extended Tudor domain from BmPAPI in complex with sDMA
Classification: RNA BINDING PROTEIN
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-05-08
Authors: Hubbard, P.A., Pan, X., Ohtaki, A., McNally, R., Honda, S., Kirino, Y., Murali, R.
PDB entry 5vqi: Nuclear transport of the Neurospora crassa NIT2 transcription factor is mediated by Importin-alpha
Classification: PROTEIN TRANSPORT
Source organism: Neurospora crassa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2017-05-09
Authors: Bernardes, N.E., Fontes, M.R.M.
PDB entry 5vqj: Discovery of a first GH11 exo-1,4-beta-xylanase from a diverse microbial sugar cane bagasse composting community
Classification: HYDROLASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.761 Å
Deposited: 2017-05-09
Authors: Mello, B.L., Polikarpov, I.
PDB entry 5vqk: X-ray co-structure of nuclear receptor ROR-gammat Ligand Binding Domain with a inverse agonist and SRC2 peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-05-09
Authors: Li, X.
PDB entry 5vql: X-ray co-structure of nuclear receptor ROR-gammat Ligand Binding Domain with a inverse agonist and SRC2 peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-05-09
Authors: Li, X.
PDB entry 5vqm: Clostridium difficile TcdB-GTD bound to PA41 Fab
Classification: TOXIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Peptoclostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2017-05-09
Authors: Kroh, H.K., Spiller, B.W., Lacy, D.B.
PDB entry 5vqn: E119D mutant of 2009 H1N1 PA Endonuclease in complex with RO-7
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2017-05-09
Authors: Kumar, G., White, S.W.
PDB entry 5vqp: Crystal structure of human pro-TGF-beta1
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2017-05-09
Authors: Zhao, B., Xu, S., Dong, X., Lu, C., Springer, T.A.
PDB entry 5vqq: Crystal Structure of HIV-1 Reverse Transcriptase in Complex with N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)-2-fluoro-N-methylacetamide (JLJ683), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2017-05-09
Authors: Chan, A.H., Anderson, K.S.
PDB entry 5vqr: Crystal Structure of HIV-1 Reverse Transcriptase in Complex with N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)-N-methylacrylamide (JLJ684), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2017-05-09
Authors: Chan, A.H., Anderson, K.S.
PDB entry 5vqs: Crystal Structure of HIV-1 Reverse Transcriptase in Complex with N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)acrylamide (JLJ685), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.504 Å
Deposited: 2017-05-09
Authors: Chan, A.H., Anderson, K.S.
PDB entry 5vqt: Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 2-chloro-N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)-N-methylacetamide (JLJ686), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.556 Å
Deposited: 2017-05-09
Authors: Chan, A.H., Czyzyk, D.J., Anderson, K.S.
PDB entry 5vqu: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) Variant in Complex with N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)-2-fluoro-N-methylacetamide (JLJ683), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-05-09
Authors: Petrova, Z.O., Chan, A.H., Anderson, K.S.
PDB entry 5vqv: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) Variant in Complex with N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)-N-methylacrylamide (JLJ684), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2017-05-09
Authors: Chan, A.H., Anderson, K.S.
PDB entry 5vqw: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) Variant in Complex with N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)acrylamide (JLJ685), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-05-09
Authors: Chan, A.H., Kudalkar, S.N., Anderson, K.S.
PDB entry 5vqx: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) Variant in Complex with 2-chloro-N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)-N-methylacetamide (JLJ686), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-05-09
Authors: Chan, A.H., Anderson, K.S.
PDB entry 5vqy: Crystal Structure of HIV-1 Reverse Transcriptase (K103N, Y181C) Variant in Complex with N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)-N-methylacrylamide (JLJ684), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2017-05-09
Authors: Chan, A.H., Anderson, K.S.
PDB entry 5vqz: Crystal Structure of HIV-1 Reverse Transcriptase (K103N, Y181C) Variant in Complex with 2-chloro-N-(6-cyano-3-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-4-methylnaphthalen-1-yl)-N-methylacetamide (JLJ686), a Non-nucleoside Inhibitor
Classification: TRANSFERASE/HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BH10)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2017-05-09
Authors: Buckingham, A.B., Chan, A.H., Anderson, K.S.
PDB entry 5vr0: Crystal structure of glucose isomerase from Streptomyces rubiginosus
Classification: ISOMERASE,Oxidoreductase
Source organism: Streptomyces rubiginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-05-09
Authors: Borek, D., Otwinowski, Z.