LiteFold/PDB huggingface dataset:
PDB entry 6nlu: Circularly permuted Haliangium ochraceum BMC-H
Classification: STRUCTURAL PROTEIN
Source organism: Haliangium ochraceum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.607 Å
Deposited: 2019-01-09
Authors: Sutter, M., Ferlez, B., Kerfeld, C.A.
PDB entry 6nlv: Selective inhibition of carbonic anhydrase IX activity, using compound SLC-149, displays limited anticancer effects in breast cancer cell lines
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.794 Å
Deposited: 2019-01-09
Authors: Singh, S., McKenna, R.
PDB entry 6nlw: The crystal structure of class D carbapenem-hydrolyzing beta-lactamase BlaA from Shewanella oneidensis MR-1
Classification: HYDROLASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-01-09
Authors: Tan, K., Tesar, C., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6nlx: Crystal Structure of Glyceraldehyde-3-phosphate Dehydrogenase from Naegleria fowleri with bound NAD
Classification: OXIDOREDUCTASE
Source organism: Naegleria fowleri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-01-09
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nly: Fragment of human mitochondrial Alanyl-tRNA Synthetase C-Ala domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.307 Å
Deposited: 2019-01-09
Authors: Kuhle, B., Schimmel, P.
PDB entry 6nlz: Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase in complex with fragment degradation product B9D
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-01-10
Authors: Thompson, A.P., Polyak, S.W., Wegener, K.L., Bruning, J.B.
PDB entry 6nm0: Selective inhibition of carbonic anhydrase IX activity, using compound SLC-149, displays limited anticancer effects in breast cancer cell lines
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2019-01-10
Authors: Singh, S., McKenna, R.
PDB entry 6nm1: The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein A158L mutant to 2.33 Angstrom resolution exhibits a conformation change compared to the wild type form
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2019-01-10
Authors: Cuypers, M.G., Gullett, J.M., Subramanian, C., Ericson, M., White, S.W., Rock, C.O.
PDB entry 6nm2: NMR Structure of WW291
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-01-10
Authors: Wang, G., Zarena, D.
PDB entry 6nm3: NMR structure of WW295
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-01-10
Authors: Wang, G., Zarena, D.
PDB entry 6nm4: Crystal structure of SAM-bound PRDM9 in complex with MRK-740 inhibitor
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2019-01-10
Authors: Ivanochko, D., Halabelian, L., Fischer, C., Sanders, J.M., Kattar, S.D., Brown, P.J., Edwards, A.M., Bountra, C., Arrowsmith, C.H., Structural Genomics Consortium (SGC)
PDB entry 6nm5: F-pilus/MS2 Maturation protein complex
Classification: PROTEIN BINDING
Source organism: Enterobacteria phage MS2; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2019-01-10
Authors: Meng, R., Chang, J., Zhang, J.
PDB entry 6nm6: Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to N6 FR3-03 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.2 Angstrom
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.739 Å
Deposited: 2019-01-10
Authors: Lai, Y.-T., Kwong, P.D.
PDB entry 6nm7: PD-L1 IgV domain bound to fragment
Classification: immune system/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.426 Å
Deposited: 2019-01-10
Authors: Perry, E., Zhao, B.
PDB entry 6nm8: IgV-V76T BMS compound 105
Classification: immune system/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.792 Å
Deposited: 2019-01-10
Authors: Perry, E., Zhao, B., Fesik, S.
PDB entry 6nm9: CryoEM structure of the LbCas12a-crRNA-AcrVA4 dimer
Classification: UNKNOWN FUNCTION/RNA
Source organism: Lachnospiraceae bacterium ND2006; Moraxella bovoculi; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2019-01-10
Authors: Chang, L., Li, Z., Zhang, H.
PDB entry 6nma: CryoEM structure of the LbCas12a-crRNA-AcrVA4 complex
Classification: UNKNOWN FUNCTION/RNA
Source organism: Lachnospiraceae bacterium ND2006; Moraxella bovoculi; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2019-01-10
Authors: Chang, L., Li, Z., Zhang, H.
PDB entry 6nmb: Tranexamic Acid is an Active Site Inhibitor of Urokinase Plasminogen Activator
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-01-10
Authors: Law, R.H.P., Wu, G.
PDB entry 6nmc: CryoEM structure of the LbCas12a-crRNA-2xAcrVA1 complex
Classification: Unknown Function/RNA
Source organism: Lachnospiraceae bacterium ND2006; Moraxella bovoculi; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.24 Å
Deposited: 2019-01-10
Authors: Chang, L., Li, Z., Zhang, H.
PDB entry 6nmd: cryo-EM Structure of the LbCas12a-crRNA-AcrVA1 complex
Classification: UNKNOWN FUNCTION/RNA
Source organism: Lachnospiraceae bacterium ND2006; Moraxella bovoculi; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2019-01-10
Authors: Chang, L., Li, Z., Zhang, H.
PDB entry 6nme: Structure of LbCas12a-crRNA
Classification: UNKNOWN FUNCTION/RNA
Source organism: Lachnospiraceae bacterium ND2006; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.67 Å
Deposited: 2019-01-10
Authors: Chang, L., Li, Z., Zhang, H.
PDB entry 6nmf: SFX structure of reduced cytochrome c oxidase at room temperature
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-01-10
Authors: Rousseau, D.L., Yeh, S.-R., Ishigami, I.
PDB entry 6nmg: Crystal Structure of Rat Ric-8A G alpha binding domain
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-01-10
Authors: Zeng, B., Mou, T.C., Sprang, S.R.
PDB entry 6nmi: Cryo-EM structure of the human TFIIH core complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-01-10
Authors: Greber, B.J., Toso, D., Fang, J., Nogales, E.
PDB entry 6nmj: Crystal Structure of Rat Ric-8A G alpha binding domain, "Paratone-N Immersed"
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-01-11
Authors: Zeng, B., Mou, T.C., Sprang, S.R.
PDB entry 6nmk: Binary complex structure of the T130K mutant of ANT-4'' with Neomycin
Classification: transferase/ANTIBIOTIC
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2019-01-11
Authors: Cuneo, M.J., Selvaraj, B.
PDB entry 6nml: Ternary structure of the T130K mutant of ANT-4'' with Neomycin and AMPCPP
Classification: transferase/ANTIBIOTIC
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-01-11
Authors: Cuneo, M.J., Selvaraj, B.
PDB entry 6nmm: Ternary complex structure of the T130K mutant of ANT-4 with Neomycin, AMPCPP and Pyrophosphate
Classification: transferase/ANTIBIOTIC
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-01-11
Authors: Cuneo, M.J., Selvaraj, B.
PDB entry 6nmn: Ternary complex structure of the T130K mutant of ANT-4'' with Neomycin and ATP (No Pyrophosphate)
Classification: transferase/ANTIBIOTIC
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-01-11
Authors: Cuneo, M.J., Selvaraj, B.
PDB entry 6nmo: Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (IspF) Burkholderia pseudomallei in complex with ligand SR-4
Classification: LYASE
Source organism: Burkholderia pseudomallei (strain 1710b)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2019-01-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nmp: SFX structure of oxidized cytochrome c oxidase at room temperature
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2019-01-11
Authors: Rousseau, D.L., Yeh, S.-R., Ishigami, I.
PDB entry 6nmq: Hypoxia-Inducible Factor (HIF) Prolyl Hydroxylase 2 (PHD2) in Complex with the Carboxamide Analog JNJ43058171
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2019-01-11
Authors: Bembenek, S.D., Mirzadegan, T.
PDB entry 6nmr: Blocking Fab 119 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2019-01-11
Authors: Wibowo, A.S., Carter, J.J., Sim, J.
PDB entry 6nms: Blocking Fab 136 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2019-01-11
Authors: Wibowo, A.S., Carter, J.J., Sim, J.
PDB entry 6nmt: Non-Blocking Fab 3 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2019-01-11
Authors: Wibowo, A.S., Carter, J.J., Sim, J.
PDB entry 6nmu: Kick-Off Fab 115 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2019-01-11
Authors: Wibowo, A.S., Carter, J.J., Sim, J.
PDB entry 6nmv: Non-Blocking Fab 218 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2019-01-11
Authors: Wibowo, A.S., Carter, J.J., Sim, J.
PDB entry 6nmw: Crystal structure of the human Lyn SH3 domain
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.199 Å
Deposited: 2019-01-12
Authors: Berndt, S., Gurevich, V.V., Iverson, T.M.
PDB entry 6nmx: Threonine synthase from Bacillus subtilis ATCC 6633 with PLP and APPA
Classification: LYASE
Source organism: Bacillus subtilis subsp. spizizenii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.971 Å
Deposited: 2019-01-12
Authors: Petronikolou, N., Nair, S.K.
PDB entry 6nmy: A Cytokine-receptor complex
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.301 Å
Deposited: 2019-01-13
Authors: Dhagat, U., Kan, W.L., Hercus, T.R., Broughton, S.E., Nero, T.L., Lopez, A.F., Parker, M.W.
PDB entry 6nmz: Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase in complex with an intentionally produced fragment degradation product B9D
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-01-14
Authors: Thompson, A.P., Polyak, S.W., Wegener, K.L., Bruning, J.B.
PDB entry 6nn0: Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase in complex with 2'-deoxycytidine and fragment degradation product B9D
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.343 Å
Deposited: 2019-01-14
Authors: Thompson, A.P., Polyak, S.W., Wegener, K.L., Bruning, J.B.
PDB entry 6nn1: Xanthomonas citri PGM Apo-Dephospho
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-01-14
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nn2: Xanthomonas citri PGM Apo-Phospho
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2019-01-14
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nn3: Structure of parvovirus B19 decorated with Fab molecules from a human antibody
Classification: VIRUS LIKE PARTICLE
Source organism: Homo sapiens; Human parvovirus B19
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2019-01-14
Authors: Rossmann, M.G., Sun, Y., Klose, T., Liu, Y.
PDB entry 6nn4: The structure of human liver pyruvate kinase, hLPYK-D499N, in complex with Fru-1,6-BP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-01-14
Authors: McFarlane, J.S., Ronnebaum, T.A., Meneely, K.M., Fenton, A.W., Lamb, A.L.
PDB entry 6nn5: The structure of human liver pyruvate kinase, hLPYK-W527H
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.256 Å
Deposited: 2019-01-14
Authors: McFarlane, J.S., Ronnebaum, T.A., Meneely, K.M., Fenton, A.W., Lamb, A.L.
PDB entry 6nn6: Structure of Dot1L-H2BK120ub nucleosome complex
Classification: GENE REGULATION
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-01-14
Authors: Anderson, C.J., Baird, M.R., Hsu, A., Barbour, E.H., Koyama, Y., Borgnia, M.J., McGinty, R.K.
PDB entry 6nn7: The structure of human liver pyruvate kinase, hLPYK-GGG
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2019-01-14
Authors: McFarlane, J.S., Ronnebaum, T.A., Meneely, K.M., Fenton, A.W., Lamb, A.L.
PDB entry 6nn8: The structure of human liver pyruvate kinase, hLPYK-S531E
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.416 Å
Deposited: 2019-01-14
Authors: McFarlane, J.S., Ronnebaum, T.A., Meneely, K.M., Fenton, A.W., Lamb, A.L.
PDB entry 6nn9: REFINED ATOMIC STRUCTURES OF N9 SUBTYPE INFLUENZA VIRUS NEURAMINIDASE AND ESCAPE MUTANTS
Classification: HYDROLASE(O-GLYCOSYL)
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1991-03-28
Authors: Tulip, W.R., Varghese, J.N., Baker, A.T., Vandonkelaar, A., Laver, W.G., Webster, R.G., Colman, P.M.
PDB entry 6nna: Human Fatty Acid Synthase Psi/KR Tri-Domain with NADPH and Compound 22
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2019-01-14
Authors: Toms, A.V., Martin, M.W.
PDB entry 6nnb: Solution structure of the Tudor domain of PSHCP
Classification: RNA BINDING PROTEIN
Source organism: Prochlorococcus marinus (strain MIT 9303)
Experimental method: SOLUTION NMR
Deposited: 2019-01-14
Authors: Bauer, K.M., Pelligrini, M., Ragusa, M.J.
PDB entry 6nnc: Structure of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and pemetrexed
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-01-14
Authors: Ribeiro, J.A., Chavez-Pacheco, S.M., Dias, M.V.B.
PDB entry 6nnd: Structure of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and dihydrofolate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-01-14
Authors: Ribeiro, J.A., Chavez-Pacheco, S.M., Dias, M.V.B.
PDB entry 6nne: Crystal structure of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with diaverdine
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.595 Å
Deposited: 2019-01-14
Authors: Ribeiro, J.A., Chavez-Pacheco, S.M., Dias, M.V.B.
PDB entry 6nnf: Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to VRC01 FR3-03 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.5 Angstrom
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.762 Å
Deposited: 2019-01-14
Authors: Lai, Y.-T., Kwong, P.D.
PDB entry 6nng: Tubulin-RB3_SLD-TTL in complex with compound DJ95
Classification: CELL CYCLE
Source organism: Gallus gallus; Homo sapiens; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.397 Å
Deposited: 2019-01-15
Authors: Kumar, G., Wang, Y., Li, W., White, S.W.
PDB entry 6nnh: Structure of Closed state of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and cycloguanil
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.523 Å
Deposited: 2019-01-15
Authors: Giudice, J.H.P., Ribeiro, J.A., Dias, M.V.B.
PDB entry 6nni: Structure of closed state of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and pyrimethamine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.561 Å
Deposited: 2019-01-15
Authors: Ribeiro, J.A., Chavez-Pacheco, S.M., Dias, M.V.B.
PDB entry 6nnj: Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to CH31 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.1 Angstrom
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-01-15
Authors: Lai, Y.-T., Kwong, P.D.
PDB entry 6nnn: Xanthomonas citri Dephospho-PGM in complex with glucose-1-phosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2019-01-15
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nno: Xanthomonas citri Phospho-PGM in complex with glucose-1-phosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2019-01-15
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nnp: Xanthomonas citri Dephospho-PGM in complex with glucose-6-phosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-01-15
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nnq: Non-covalent structure of SENP1 in complex with SUMO2
Classification: HYDROLASE/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.621 Å
Deposited: 2019-01-15
Authors: Ambaye, N.D.
PDB entry 6nnr: high-resolution structure of wild-type E. coli thymidylate synthase
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2019-01-15
Authors: Stroud, R.M., Finer-Moore, J.
PDB entry 6nns: Xanthomonas citri Phospho-PGM in complex with glucose-6-phosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2019-01-15
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nnt: Xanthomonas citri Dephospho-PGM in complex with glucose-1,6-bisphosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2019-01-15
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nnu: Xanthomonas citri Phospho-PGM in complex with glucose-1,6-phosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2019-01-15
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nnv: PD-L1 IgV domain complex with macro-cyclic peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2019-01-15
Authors: Zhao, B., Perry, E.
PDB entry 6nnw: Tsn15 in complex with substrate intermediate
Classification: UNKNOWN FUNCTION
Source organism: Streptomyces longisporoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-01-15
Authors: Paiva, F.C.R., Little, R., Leadlay, P., Dias, M.V.B.
PDB entry 6nnx: Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121M Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.87 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2019-01-15
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 6nny: Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39E:R59Y:L121E Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.67 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.668 Å
Deposited: 2019-01-15
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 6nnz: Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase in complex with fragment analogue 4
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-01-15
Authors: Thompson, A.P., Polyak, S.W., Wegener, K.L., Bruning, J.B.
PDB entry 6no0: ADP bound to ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Classification: LIGASE
Source organism: Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.209 Å
Deposited: 2019-01-15
Authors: Huang, J., Fraser, M.E.
PDB entry 6no1: ADP bound to K46bE mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Classification: LIGASE
Source organism: Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2019-01-15
Authors: Huang, J., Fraser, M.E.
PDB entry 6no2: ADP bound to K114bD mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Classification: LIGASE
Source organism: Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.159 Å
Deposited: 2019-01-15
Authors: Huang, J., Fraser, M.E.
PDB entry 6no3: ADP bound to V113bL mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Classification: LIGASE
Source organism: Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.939 Å
Deposited: 2019-01-15
Authors: Huang, J., Fraser, M.E.
PDB entry 6no4: ADP bound to L227bF mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Classification: LIGASE
Source organism: Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2019-01-15
Authors: Huang, J., Fraser, M.E.
PDB entry 6no5: ADP bound to K46bE&K114bD mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Classification: LIGASE
Source organism: Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.069 Å
Deposited: 2019-01-15
Authors: Huang, J., Fraser, M.E.
PDB entry 6no6: K46bE&K114bD mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Classification: LIGASE
Source organism: Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.911 Å
Deposited: 2019-01-15
Authors: Huang, J., Fraser, M.E.
PDB entry 6no7: Crystal Structure of the full-length wild-type PKA RIa Holoenzyme
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2019-01-15
Authors: Lu, T., Wu, J., Taylor, S.S.
PDB entry 6no8: PIM1 in complex with Cpd9 ((R)-5-amino-N-(3-(4-aminoazepan-1-yl)-1H-pyrazol-4-yl)-2-(2,6-difluorophenyl)thiazole-4-carboxamide)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.377 Å
Deposited: 2019-01-15
Authors: Murray, J.M., wang, X.
PDB entry 6no9: PIM1 in complex with Cpd16 (5-amino-N-(5-((4R,5R)-4-amino-5-fluoroazepan-1-yl)-1-methyl-1H-pyrazol-4-yl)-2-(2,6-difluorophenyl)thiazole-4-carboxamide)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.712 Å
Deposited: 2019-01-15
Authors: Murray, J.M., Noland, C.
PDB entry 6noa: Solution Structure of the RNA element that recruits eIF3 to the 5'-UTR of c-Jun and regulates specialized translation initiation (apical loop)
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2019-01-16
Authors: Walker, M., Shortridge, M., Varani, G.
PDB entry 6nob: Structure of Glycoside Hydrolase family 32 from Bifidobacterium adolescentis
Classification: HYDROLASE
Source organism: Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2019-01-16
Authors: Mera, A.M., Lima, M.Z.T., Muniz, J.R.C.
PDB entry 6noc: Crystal structure of FBF-2 repeat 5 mutant (C363A, R364Y) in complex with 8-nt RNA
Classification: rna binding protein/rna
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.849 Å
Deposited: 2019-01-16
Authors: McCann, K., Wang, Y., Qiu, C., Hall, T.M.T.
PDB entry 6nod: Crystal structure of C. elegans PUF-8 in complex with RNA
Classification: rna binding protein/rna
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.547 Å
Deposited: 2019-01-16
Authors: Wang, Y., McCann, K.L., Qiu, C., Hall, T.M.T.
PDB entry 6noe: Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E:I63D Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.97 Angstrom Resolution
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.969 Å
Deposited: 2019-01-16
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 6nof: Crystal structure of FBF-2 repeat 5 mutant (C363A, R364Y, Q367S) in complex with 8-nt RNA
Classification: rna binding protein/rna
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.251 Å
Deposited: 2019-01-16
Authors: McCann, K.L., Wang, Y., Qiu, C., Hall, T.M.T.
PDB entry 6nog: Poised-state Dot1L bound to the H2B-Ubiquitinated nucleosome
Classification: STRUCTURAL PROTEIN/TRANSFERASE/DNA
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-01-16
Authors: Worden, E.J., Hoffmann, N.A., Wolberger, C.
PDB entry 6noh: Crystal structure of FBF-2 repeat 5 mutant (C363S, R364Y, Q367S) in complex with 8-nt RNA
Classification: rna binding protein/rna
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.249 Å
Deposited: 2019-01-16
Authors: McCann, K.L., Wang, Y., Qiu, C., Hall, T.M.T.
PDB entry 6noi: Crystal structure of Tsn15 in apo form
Classification: LYASE
Source organism: Streptomyces longisporoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-01-16
Authors: Little, R., Paiva, F.C.R., Dias, M.V.B., Leadlay, P.
PDB entry 6noj: PD-L1 IgV domain V76T with fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2019-01-16
Authors: Zhao, B., Perry, E.
PDB entry 6nok: The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B1 protein loaded with myristic acid (C14:0) to 1.69 Angstrom resolution
Classification: TRANSFERASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2019-01-16
Authors: Cuypers, M.G., Gullett, J.M., Subramanian, C., White, S.W., Rock, C.O.
PDB entry 6nol: Xanthomonas citri Dephospho-PGM in complex with mannose-1-phosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2019-01-16
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nom: NMR solution structure of Pisum sativum defensin 2 (Psd2) provides evidence for the presence of hydrophobic surface clusters
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pisum sativum
Experimental method: SOLUTION NMR
Deposited: 2019-01-16
Authors: Pinheiro-Aguiar, R., Amaral, V.S.G., Bastos, I., Kurtenbach, E., Almeida, F.C.L.
PDB entry 6non: Structure of Cyanthece apo McdA
Classification: DNA BINDING PROTEIN
Source organism: Cyanothece
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2019-01-16
Authors: Schumacher, M.A.
PDB entry 6noo: Structure of Cyanothece McdA-AMPPNP complex
Classification: DNA BINDING PROTEIN
Source organism: Cyanothece
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-01-16
Authors: Schumacher, M.A.
PDB entry 6nop: Structure of Cyanothece McdA(D38A)-ATP complex
Classification: DNA BINDING PROTEIN
Source organism: Cyanothece
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-01-16
Authors: Schumacher, M.A.
PDB entry 6noq: Xanthomonas citri Phospho-PGM in complex with mannose-1-phosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2019-01-16
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nor: Crystal structure of GenD2 from gentamicin A biosynthesis in complex with NAD
Classification: OXIDOREDUCTASE
Source organism: Micromonospora echinospora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2019-01-16
Authors: Araujo, N.C., Bury, P.S., Huang, F., Leadlay, P.F., Dias, M.V.B.
PDB entry 6nos: PD-L1 IgV domain V76T with fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2019-01-16
Authors: Zhao, B., Perry, E.
PDB entry 6not: Crystal structure of a full length elongation factor G (EF-G) from Rickettsia prowazekii
Classification: TRANSLATION
Source organism: Rickettsia prowazekii (strain Madrid E)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-01-16
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nou: An scFv derived from ixekizumab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.914 Å
Deposited: 2019-01-16
Authors: Durbin, J.D., Clawson, D.K., Lu, F., Tian, Y., Lu, J., Atwell, S.
PDB entry 6nov: A Fab derived from ixekizumab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2019-01-16
Authors: Durbin, J.D., Clawson, D.K., Lu, F., Tian, Y., Lu, J., Schmitt, M., Atwell, S.
PDB entry 6now: Human Mitochondrial Alanyl-tRNA Synthetase C-Ala domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.099 Å
Deposited: 2019-01-16
Authors: Kuhle, B., Schimmel, P.
PDB entry 6nox: Solution structure of SFTI-KLK5 inhibitor
Classification: BIOSYNTHETIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-01-16
Authors: White, A.M.
PDB entry 6noy: Structure of Cyanothece McdB
Classification: STRUCTURAL PROTEIN
Source organism: Cyanothece
Experimental method: X-RAY DIFFRACTION
Resolution: 3.46 Å
Deposited: 2019-01-16
Authors: Schumacher, M.A.
PDB entry 6noz: X-ray structure of PEDV papain-like protease 2
Classification: HYDROLASE
Source organism: Porcine epidemic diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-01-16
Authors: Clasman, J.C., Mesecar, A.D., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6np0: Cryo-EM structure of 5HT3A receptor in presence of granisetron
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2019-01-17
Authors: Basak, S., Chakrapani, S.
PDB entry 6np1: Product state mimicry leads to aminoglycoside discrimination in an antibiotic acetyltransferase
Classification: TRANSFERASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-01-17
Authors: Kumar, P., Cuneo, M.J.
PDB entry 6np2: AAC-VIa bound to Sisomicin
Classification: TRANSFERASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2019-01-17
Authors: Kumar, P., Cuneo, M.J.
PDB entry 6np3: AAC-VIa bound to Gentamicin
Classification: TRANSFERASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2019-01-17
Authors: Kumar, P., Cuneo, M.J.
PDB entry 6np4: AAC-VIa bound to Tobramycin
Classification: TRANSFERASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.151 Å
Deposited: 2019-01-17
Authors: Kumar, P., Cuneo, M.J.
PDB entry 6np5: AAC-VIa bound to Kanamycin B
Classification: TRANSFERASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.353 Å
Deposited: 2019-01-17
Authors: Kumar, P., Cuneo, M.J.
PDB entry 6np6: Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
Classification: TRANSCRIPTION
Source organism: Porphyromonas gingivalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-01-17
Authors: Musayev, F.N., Belvin, B.R., Escalante, C.R., Turner, J., Scarsdale, J.N., Lewis, J.P.
PDB entry 6np7: Crystal structure of Trypanosoma cruzi bromodomain BDF2 (TcCLB.506553.20)
Classification: TRANSCRIPTION
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2019-01-17
Authors: Lin, Y.H., Dong, A., Loppnau, P., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Vedadi, M., Hui, R., Harding, R.J., Structural Genomics Consortium (SGC)
PDB entry 6np8: Xanthomonas citri Phospho-PGM in complex with mannose-6-phosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2019-01-17
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6np9: PD-L1 IgV domain V76T with fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2019-01-17
Authors: Zhao, B., Perry, E.
PDB entry 6npa: X-ray crystal structure of TmpB, (R)-1-hydroxy-2-trimethylaminoethylphosphonate oxygenase, with (R)-1-hydroxy-2-trimethylaminoethylphosphonate
Classification: OXIDOREDUCTASE
Source organism: Leisingera caerulea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2019-01-17
Authors: Rajakovich, L.J., Mitchell, A.J., Boal, A.K.
PDB entry 6npb: X-ray crystal structure of TmpA, 2-trimethylaminoethylphosphonate hydroxylase, with Fe and 2OG
Classification: OXIDOREDUCTASE
Source organism: Leisingera caerulea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2019-01-17
Authors: Rajakovich, L.J., Mitchell, A.J., Boal, A.K.
PDB entry 6npc: X-ray crystal structure of TmpA, 2-trimethylaminoethylphosphonate hydroxylase, with Fe, 2OG, and 2-trimethylaminoethylphosphonate
Classification: OXIDOREDUCTASE
Source organism: Leisingera caerulea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-01-17
Authors: Rajakovich, L.J., Mitchell, A.J., Boal, A.K.
PDB entry 6npd: X-ray crystal structure of TmpA, 2-trimethylaminoethylphosphonate hydroxylase, with Fe, 2OG, and (R)-1-hydroxy-2-trimethylaminoethylphosphonate
Classification: OXIDOREDUCTASE
Source organism: Leisingera caerulea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2019-01-17
Authors: Rajakovich, L.J., Mitchell, A.J., Boal, A.K.
PDB entry 6npe: C-abl Kinase domain with the activator(cmpd6), 2-cyano-N-(4-(3,4-dichlorophenyl)thiazol-2-yl)acetamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-01-17
Authors: campobasso, N.
PDB entry 6npf: Structure of E.coli enolase in complex with an analog of the natural product SF-2312 metabolite.
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2019-01-17
Authors: Erlandsen, H., Krucinska, J., Lombardo, M., Wright, D.
PDB entry 6nph: Structure of NKCC1 TM domain
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-01-17
Authors: Feng, L., Liao, M.F., Orlando, B., Zhang, J.R.
PDB entry 6npi: Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragments
Classification: viral protein/inhibitor
Source organism: Epstein-Barr virus (strain B95-8)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.501 Å
Deposited: 2019-01-17
Authors: Messick, T.E.
PDB entry 6npj: Structure of the NKCC1 CTD
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-01-17
Authors: Feng, L., Liao, M.F., Orlando, B., Zhang, J.R.
PDB entry 6npk: Structure of the TM domain
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2019-01-17
Authors: Feng, L., Liao, M.F., Orlando, B., Zhang, J.R.
PDB entry 6npl: Cryo-EM structure of NKCC1
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-01-17
Authors: Feng, L., Liao, M.F., Orlando, B., Zhang, J.R.
PDB entry 6npm: Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragments
Classification: viral protein/inhibitor
Source organism: Epstein-Barr virus (strain B95-8)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.603 Å
Deposited: 2019-01-17
Authors: Messick, T.E.
PDB entry 6npn: Crystal Structure of the Human vaccinia-related kinase bound to a N,N-dipropynyl-dihydropteridine-3-hydroxyindazole inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-01-18
Authors: Counago, R.M., dos Reis, C.V., Takarada, J.E., Azevedo, A., Guimaraes, C., Mascarello, A., Gama, F., Ferreira, M., Massirer, K.B., Arruda, P., Edwards, A.M., Elkins, J.M., Structural Genomics Consortium (SGC)
PDB entry 6npo: Crystal structure of oligopeptide ABC transporter from Bacillus anthracis str. Ames (substrate-binding domain)
Classification: TRANSPORT PROTEIN
Source organism: Bacillus anthracis; Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-01-18
Authors: Michalska, K., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6npp: Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragments
Classification: viral protein/inhibitor
Source organism: Epstein-Barr virus (strain B95-8)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2019-01-18
Authors: Messick, T.E.
PDB entry 6npq: Pseudomonas fluorescens isocyanide hydratase at 298 K XFEL data
Classification: LYASE
Source organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-01-18
Authors: Dasgupta, M., van den Bedem, H., Wilson, M.A.
PDB entry 6npr: Crystal structure of H-2Dd with C84-C139 disulfide in complex with gp120 derived peptide P18-I10
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2019-01-18
Authors: Toor, J., McShan, A.C., Tripathi, S.M., Sgourakis, N.G.
PDB entry 6nps: Crystal structure of GH115 enzyme AxyAgu115A from Amphibacillus xylanus
Classification: HYDROLASE
Source organism: Amphibacillus xylanus NBRC 15112
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2019-01-18
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Yan, R., Master, E., Savchenko, A.
PDB entry 6npt: TRK-A IN COMPLEX WITH LIGAND 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2019-01-18
Authors: Subramanian, G.
PDB entry 6npu: C-abl Kinase domain with the activator(cmpd29), N-(1-(3,4-dichlorophenyl)-4,5-dihydro-1H-pyrazol-3-yl)acetamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2019-01-18
Authors: Campobasso, N.
PDB entry 6npv: C-abl Kinase domain with the activator(cmpd51), N-(1-(3,4-dichlorophenyl)-4-(2-hydroxyethyl)-4,5-dihydro-1H-pyrazol-3-yl)isonicotinamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2019-01-18
Authors: campobasso, N.
PDB entry 6npw: SSu72/Sympk in complex with Ser2/Ser5 phosphorylated peptide
Classification: HYDROLASE
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.486 Å
Deposited: 2019-01-18
Authors: Irani, S., Zhang, Y.
PDB entry 6npx: Xanthomonas citri Dephospho-PGM in complex with mannose-6-phosphate
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2019-01-18
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6npy: Cryo-EM structure of NLRP3 bound to NEK7
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-01-18
Authors: Sharif, H., Wang, L., Wang, W.L., Wu, H.
PDB entry 6npz: Crystal structure of Akt1 (aa 123-480) kinase with a bisubstrate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2019-01-18
Authors: Chu, N., Cole, P.A., Gabelli, S.B.
PDB entry 6nq0: Cryo-EM structure of human TPC2 channel in the ligand-bound open state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-01-18
Authors: She, J., Zeng, W., Guo, J., Chen, Q., Bai, X., Jiang, Y.
PDB entry 6nq1: Cryo-EM structure of human TPC2 channel in the apo state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2019-01-18
Authors: She, J., Zeng, W., Guo, J., Chen, Q., Bai, X., Jiang, Y.
PDB entry 6nq2: Cryo-EM structure of human TPC2 channel in the ligand-bound closed state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-01-18
Authors: She, J., Zeng, W., Guo, J., Chen, Q., Bai, X., Jiang, Y.
PDB entry 6nq3: Crystal Structure of a SUZ12-RBBP4-PHF19-JARID2 Heterotetrameric Complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2019-01-19
Authors: Chen, S., Jiao, L., Liu, X.
PDB entry 6nq4: Crystal structure of a Hydrolase, haloacid dehalogenase-like family from Brucella suis 1330
Classification: HYDROLASE
Source organism: Brucella suis biovar 1 (strain 1330)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2019-01-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6nq5: human (alpha met/beta hemichrome) hemoglobin with S-nitrosation at beta-Cys93
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-01-19
Authors: Yi, J.
PDB entry 6nq6: Structure & function of a new Aspartylglucosaminuria variant
Classification: HYDROLASE
Source organism: Elizabethkingia meningoseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-01-19
Authors: Pande, S., Guo, H.C.
PDB entry 6nq7: Crystal structure of YetJ from Bacillus Subtilis crystallized in lipidic cubic phase
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-01-19
Authors: Guo, G., Chang, Y., Liu, Q.
PDB entry 6nq8: Crystal structure of YetJ mutant from Bacillus Subtilis - D171E
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2019-01-19
Authors: Guo, G., Chang, Y., Liu, Q.
PDB entry 6nq9: Crystal structure of YetJ mutant from Bacillus Subtilis - D195E
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2019-01-19
Authors: Guo, G., Chang, Y., Liu, Q.
PDB entry 6nqa: Active state Dot1L bound to the H2B-Ubiquitinated nucleosome, 1-to-1 complex
Classification: STRUCTURAL PROTEIN/TRANSFERASE/DNA
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2019-01-19
Authors: Worden, E.J., Hoffmann, N.A., Wolberger, C.
PDB entry 6nqb: Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli H736
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-01-20
Authors: Ortega, J.
PDB entry 6nqc: Crystal structure of a peptidase from an acI-B1 Actinobacterium
Classification: HYDROLASE
Source organism: actinobacterium SCGC AAA027-L06
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2019-01-20
Authors: Forest, K.T., Dwulit-Smith, J.R., Satyshur, K.A.
PDB entry 6nqd: Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-01-21
Authors: Fang, Q., Rossmann, M.G.
PDB entry 6nqe: Xanthomonas citri PGM Apo-Dephospho at room temperature
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-01-21
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nqf: Xanthomonas citri PGM Apo-Phospho at room temperature
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-01-21
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 6nqg: Xanthomonas citri Phospho-PGM in complex with glucopyranosyl-1-methyl-phosphonic acid at room temperature
Classification: ISOMERASE
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2019-01-21
Authors: Stiers, K.M., Beamer, L.J.