LiteFold/PDB huggingface dataset:
PDB entry 8ii9: crystal structure of Hyp mutant from Hypoxylon sp. E7406B
Classification: TRANSFERASE
Source organism: Hypoxylon sp. E7406B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2023-02-24
Authors: Gao, J., Liu, W.D., Li, Q., Han, X., Wei, H.L., Dai, Z.J., Su, L.Q.
PDB entry 8iia: Crystal structure of the oligomeric state of the extracellular domain of human myelin protein zero(MPZ/P0)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2023-02-24
Authors: Sakakura, M., Tanabe, M., Mio, K.
PDB entry 8iib: Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta85 mutant (residues 86-546)
Classification: TRANSFERASE
Source organism: Israeli acute paralysis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2023-02-24
Authors: Fang, X., Lu, G., Hou, C., Gong, P.
PDB entry 8iic: Crystal structure of Israeli acute paralysis virus RNA-dependent RNA polymerase delta40 mutant (residues 41-546)
Classification: TRANSFERASE
Source organism: Israeli acute paralysis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2023-02-24
Authors: Fang, X., Lu, G., Hou, C., Gong, P.
PDB entry 8iie: Complex form of MsmUdgX and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iif: H109A mutant of uracil DNA glycosylase X
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iig: Complex form of MsmUdgX H109A mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by UdgX H109A
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iih: H109C mutant of uracil DNA glycosylase X
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iii: Complex form of MsmUdgX H109C mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109C
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iij: H109G mutant of uracil DNA glycosylase X
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iil: Complex form of MsmUdgX H109G mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109G
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iim: H109K mutant of uracil DNA glycosylase X
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iin: Complex form of MsmUdgX H109K mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109K
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iio: H109Q mutant of uracil DNA glycosylase X
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iip: Complex form of MsmUdgX H109Q mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109Q
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iiq: MsmUdgX H109S/E52N double mutant
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iir: MsmUdgX H109S/Q53A double mutant
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iis: MsmUdgX H109S/R184A double mutant
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iit: Complex form of MsmUdgX H109S/R184A double mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109S/R184A
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-02-24
Authors: Aroli, S.
PDB entry 8iiu: anti-VEGF nanobody
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2023-02-24
Authors: Qian, F., Zhu, S.Q.
PDB entry 8iiy: Crystal structure of MBP fused GAS41 YEATS domain in complex with H3K14ac peptide
Classification: NUCLEAR PROTEIN
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-02-24
Authors: Kikuchi, M., Umehara, T.
PDB entry 8iiz: Crystal structure of MBP fused GAS41 YEATS domain in complex with H3K27ac peptide
Classification: NUCLEAR PROTEIN
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-24
Authors: Kikuchi, M., Umehara, T.
PDB entry 8ij0: Crystal structure of GAS41 YEATS domain in complex with H3K9ac peptide
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2023-02-24
Authors: Kikuchi, M., Umehara, T.
PDB entry 8ij1: Protomer 1 and 2 of the asymmetry trimer of the Cul2-Rbx1-EloBC-FEM1B ubiquitin ligase complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-02-24
Authors: Dai, Z., Liang, L., Yin, Y.X.
PDB entry 8ij3: Cryo-EM structure of human HCAR2-Gi complex without ligand (apo state)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2023-02-24
Authors: Pan, X., Fang, Y.
PDB entry 8ij5: Cryo-EM structure of Integrin AVB3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-02-26
Authors: Xi, Z., Cang, W., Yuanzhu, G.
PDB entry 8ij6: Crystal structure of alcohol dehydrogenase from Burkholderia gladioli with NADP
Classification: OXIDOREDUCTASE
Source organism: Burkholderia gladioli (strain BSR3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2023-02-26
Authors: Han, X., Mei, Z.L., Liu, W.D., Sun, Z.T., Ma, J.A.
PDB entry 8ij7: Crystal structure of alcohol dehydrogenase from Burkholderia gladioli
Classification: OXIDOREDUCTASE
Source organism: Burkholderia gladioli (strain BSR3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2023-02-26
Authors: Han, X., Mei, Z.L., Liu, W.D., Sun, Z.T., Ma, J.A.
PDB entry 8ij8: Crystal structure of alcohol dehydrogenase M4 mutant from Burkholderia gladioli
Classification: OXIDOREDUCTASE
Source organism: Burkholderia gladioli (strain BSR3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2023-02-26
Authors: Han, X., Mei, Z.L., Liu, W.D., Sun, Z.T., Ma, J.A.
PDB entry 8ij9: Crystal structure of the ELKS1/Rab6B complex
Classification: PROTEIN BINDING
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2023-02-26
Authors: Jin, G., Wei, Z.
PDB entry 8ija: Cryo-EM structure of human HCAR2-Gi complex with niacin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2023-02-26
Authors: Pan, X., Fang, Y.
PDB entry 8ijb: Cryo-EM structure of human HCAR2-Gi complex with acipimox
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2023-02-27
Authors: Pan, X., Fang, Y.
PDB entry 8ijc: NMR solution structure of the 1:1 complex of a platinum(II) ligand L1-transpt covalently bound to a G-quadruplex MYT1L
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2023-02-27
Authors: Liu, L.-Y., Mao, Z.-W.
PDB entry 8ijd: Cryo-EM structure of human HCAR2-Gi complex with MK-6892
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-02-27
Authors: Pan, X., Fang, Y.
PDB entry 8ijg: Crystal structure of alcohol dehydrogenase M5 from Burkholderia gladioli with NADP
Classification: OXIDOREDUCTASE
Source organism: Burkholderia gladioli BSR3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2023-02-27
Authors: Han, X., Mei, Z.L., Liu, W.D., Sun, Z.T., Ma, J.A.
PDB entry 8ijk: human KCNQ2-CaM-Ebio1 complex in the presence of PIP2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-02-27
Authors: Ma, D., Guo, J.
PDB entry 8ijl: Cyo-EM structure of wildtype non-gastric proton pump in the presence of Na+, AlF and ADP
Classification: MEMBRANE PROTEIN
Source organism: Rattus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2023-02-27
Authors: Abe, K.
PDB entry 8ijm: Cyo-EM structure of K794A non-gastric proton pump in Na+ bound E1AMPPCP state
Classification: MEMBRANE PROTEIN
Source organism: Rattus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-02-27
Authors: Abe, K.
PDB entry 8ijn: Bovine Heart Cytochrome c Oxidase in the Nitric Oxide-Bound Fully Reduced State at 100 K
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-27
Authors: Tsukihara, T., Shimada, A., Muramoto, K.
PDB entry 8ijo: Structure of DNA binding domain of McrBC endonuclease bound to DNA: Y41F-L68F double mutant
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-02-27
Authors: Adhav, V.A., Saikrishnan, K.
PDB entry 8ijp: Structure of DNA binding domain of McrBC endonuclease bound to DNA: L68Y mutant
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-02-27
Authors: Adhav, V.A., Saikrishnan, K.
PDB entry 8ijq: The cryo-EM structure of human sphingomyelin synthase-related protein in complex with ceramide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2023-02-27
Authors: Hu, K., Zhang, Q., Chen, Y., Yao, D., Zhou, L., Cao, Y.
PDB entry 8ijr: The cryo-EM structure of human sphingomyelin synthase-related protein in complex with diacylglycerol/phosphoethanolamine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-02-28
Authors: Hu, K., Zhang, Q., Chen, Y., Yao, D., Zhou, L., Cao, Y.
PDB entry 8ijs: anti-VEGF nanobody mutant
Classification: ANTITUMOR PROTEIN-IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.752 Å
Deposited: 2023-02-28
Authors: Qian, F., Zhu, S.Q.
PDB entry 8ijt: crystal structure of Hyp N135A mutant from Hypoxylon sp. E7406B
Classification: TRANSFERASE
Source organism: Hypoxylon sp. E7406B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2023-02-28
Authors: Gao, J., Su, L.Q., Li, Q., Han, X., Wei, H.L., Dai, Z.J., Liu, W.D.
PDB entry 8iju: ATP-dependent RNA helicase DDX39A (URH49delta41)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-02-28
Authors: Mikami, B., Fujita, K., Masuda, S., Kojima, M.
PDB entry 8ijv: Cryo-EM structure of the gastric proton pump with bound DQ-02
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2023-02-28
Authors: Abe, K., Yokoshima, S., Yoshimori, A.
PDB entry 8ijw: Cryo-EM structure of the gastric proton pump with bound DQ-06
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2023-02-28
Authors: Abe, K., Yokoshima, S., Yoshimori, A.
PDB entry 8ijx: Cryo-EM structure of the gastric proton pump with bound DQ-18
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.08 Å
Deposited: 2023-02-28
Authors: Abe, K., Yokoshima, S., Yoshimori, A.
PDB entry 8ijy: Synechococcus elongatus 6-4 photolyase with an 8-HDF as the antenna chromophore and a covalently linked FAD as the catalytic cofactor
Classification: DNA BINDING PROTEIN
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2023-02-28
Authors: Liu, Y., Xu, L., Zhang, P.
PDB entry 8ijz: anti-VEGF mutant
Classification: ANTITUMOR PROTEIN-IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.1 Å
Deposited: 2023-02-28
Authors: Qian, F., Zhu, S.Q.
PDB entry 8ik0: Cryo-EM structure of Stimulator of interferon genes
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-02-28
Authors: Lu, D.F., Shang, G.J.
PDB entry 8ik1: EstL5 in complex of PMSF
Classification: HYDROLASE
Source organism: Geobacillus sp. PA-3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-02-28
Authors: Chen, R., Zhang, Y.
PDB entry 8ik2: RhlA exhibits dual thioesterase and acyltransferase activities during rhamnolipid biosynthesis
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.151 Å
Deposited: 2023-02-28
Authors: Tang, T., Fu, L.H., Xie, W.H., Luo, Y.Z., Zhang, Y.T., Si, T.
PDB entry 8ik3: Structure of Stimulator of interferon genes/ligand complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-02-28
Authors: Lu, D.F., Shang, G.J.
PDB entry 8ik4: Structure of DNA binding domain of McrBC endonuclease bound to hemimethylated DNA: L68F mutant
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-28
Authors: Adhav, V.A., Saikrishnan, K.
PDB entry 8ik5: Transcription factor LMX1a homeobox domain in complex with Wnt1 promoter
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.989 Å
Deposited: 2023-02-28
Authors: Lv, M.Q., Lin, L.Q.
PDB entry 8ik6: pUbl depleted Parkin complex with pUbiquitin
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-02-28
Authors: Lenka, D.R., Kumar, A.
PDB entry 8ik7: Cryo-EM structure of hnRAC1 fibril.
Classification: RNA BINDING PROTEIN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2023-02-28
Authors: Li, D.N., Ma, Y.Y., Li, D., Dai, B., Liu, C.
PDB entry 8ik8: Structure of DNA binding domain of McrBC endonuclease bound to DNA: L68F mutant
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-28
Authors: Adhav, V.A., Saikrishnan, K.
PDB entry 8ika: Cryo-EM structure of the encapsulin shell from Mycobacterium tuberculosis
Classification: VIRUS LIKE PARTICLE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2023-02-28
Authors: Du, Z., Lai, Y., Gao, Y., Rao, Z., Gong, H.
PDB entry 8ikb: Cryo-EM structure of hnRAC1-2I fibril.
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2023-02-28
Authors: Li, D.N., Ma, Y.Y., Li, D., Dai, B., Liu, C.
PDB entry 8ikd: Structure of DNA binding domain of McrBC endonuclease bound to DNA: Y41F-L68Y double mutant
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-28
Authors: Adhav, V.A., Saikrishnan, K.
PDB entry 8ike: Transcription factors LMX1a mutant-R199A homeobox domain complex with Wnt1 promoter
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-02-28
Authors: Lv, M.Q., Lin, L.Q.
PDB entry 8ikg: Cryo-EM structure of human receptor with G proteins
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-02-28
Authors: Shen, S.Y., Shao, Z.H.
PDB entry 8ikh: Cryo-EM structure of human receptor with G proteins
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-02-28
Authors: Shen, S.Y., Shao, Z.H.
PDB entry 8ikj: Cryo-EM structure of the inactive CD97
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-02-28
Authors: Mao, C., Zhao, R., Dong, Y., Gao, M., Chen, L., Zhang, C., Xiao, P., Guo, J., Qin, J., Shen, D., Ji, S., Zang, S., Zhang, H., Wang, W., Shen, Q., Sun, P., Zhang, Y.
PDB entry 8ikl: Cryo-EM structure of the CD97-G13 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2023-02-28
Authors: Mao, C., Zhao, R., Dong, Y., Gao, M., Chen, L., Zhang, C., Xiao, P.
PDB entry 8ikm: Trans complex of phospho parkin
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-02-28
Authors: Lenka, D.R., Kumar, A.
PDB entry 8ikp: Cryo-EM structure of hnRAC1-8I fibril
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-02-28
Authors: Li, D.N., Ma, Y.Y., Li, D., Dai, B., Liu, C.
PDB entry 8ikq: NMR structure of Thanatin IM14 in LPS
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-28
Authors: Swaleeha, J., Bhattacharyya, S.
PDB entry 8ikr: Crystal structure of DpaA
Classification: HYDROLASE
Source organism: Escherichia coli 908519
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-03-01
Authors: Wang, H.-J., Hsieh, K.-Y., Lee, S.-H., Chang, C.-I.
PDB entry 8iks: Cryo-EM structure of hnRAC1-2I8I fibril.
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2023-03-01
Authors: Li, D.N., Ma, Y.Y., Li, D., Dai, B., Liu, C.
PDB entry 8ikt: Ternary trans-complex of phospho-parkin with cis ACT and pUb
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-03-01
Authors: Lenka, D.R., Kumar, A.
PDB entry 8iku: Aldo-keto reductase KmAKR - W297H
Classification: OXIDOREDUCTASE
Source organism: Kluyveromyces marxianus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2023-03-01
Authors: Xu, S.Y., Zhou, L., Xu, Y., Wang, Y.J., Zheng, Y.G.
PDB entry 8ikv: pUbl depleted phospho-Parkin(K211N,R163D) in complex with pUb
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-03-01
Authors: Lenka, D.R., Kumar, A.
PDB entry 8ikw: A complex structure of PGIP-PG
Classification: HYDROLASE
Source organism: Fusarium phyllophilum; Phaseolus vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-03-01
Authors: Xiao, Y., Chai, J.
PDB entry 8ikx: An Arabidopsis polygalacturonase PGLR
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-01
Authors: Xiao, Y., Chai, J.
PDB entry 8ikz: The mutant structure of DHAD
Classification: LYASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-03-01
Authors: Zhou, J., Zang, X., Tang, Y., Yan, Y.
PDB entry 8il0: Crystal structure of LmbT from Streptomyces lincolnensis NRRL ISP-5355
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces lincolnensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2023-03-01
Authors: Dai, Y., Li, P., Qiao, H., Xia, M., Liu, W., Fang, P.
PDB entry 8il1: Free Thanatin IM14
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-03-01
Authors: Swaleeha, A., Bhattacharyya, S.
PDB entry 8il2: Free Thanatin PM15
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-03-01
Authors: Swaleeha, A., Bhattacharyya, S.
PDB entry 8il3: Cryo-EM structure of CD38 in complex with FTL004
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2023-03-01
Authors: Yang, J., Wang, Y., Zhang, G.
PDB entry 8il4: Crystal structure of alcohol oxidase ParAOX(M59V/Q60P/R61N/F101S/N602H)(Polyporus arcularius)
Classification: OXIDOREDUCTASE
Source organism: Polyporus arcularius HHB13444
Experimental method: X-RAY DIFFRACTION
Resolution: 3.355 Å
Deposited: 2023-03-01
Authors: Wu, B., Wang, Y.
PDB entry 8il5: Crystal structure of alcohol oxidase PcAOX(M59V/Q60P/R61N)(Phanerochaete chrysosporium)
Classification: OXIDOREDUCTASE
Source organism: Phanerodontia chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.50006 Å
Deposited: 2023-03-01
Authors: Wu, B., Wang, Y.
PDB entry 8il6: Thanatin PM15 with LPS
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-03-01
Authors: Swaleeha, A., Bhattacharyya, S.
PDB entry 8il7: Structure of human soluble Adenylyl Cyclase in complex with lactate
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-03-02
Authors: Li, Q.J., Li, Z.L., Gao, P.
PDB entry 8il8: Crystal structure of Pyruvic Oxime Dioxygenase (POD) from Alcaligenes faecalis
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis subsp. faecalis NBRC 13111
Experimental method: X-RAY DIFFRACTION
Resolution: 1.769 Å
Deposited: 2023-03-03
Authors: Tsujino, S., Yamada, Y., Fujiwara, T.
PDB entry 8il9: Crystal structure of the LOV1 Q122N mutant of Klebsormidium nitens phototropin
Classification: FLAVOPROTEIN
Source organism: Klebsormidium nitens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2023-03-03
Authors: Gautam, A.K., Sharma, S., Gourinath, S., Kateriya, S.
PDB entry 8ila: Crystal structure of LmbT from Streptomyces lincolnensis NRRL ISP-5355 in complex with substrates
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces lincolnensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2023-03-03
Authors: Dai, Y., Qiao, H., Xia, M., Fang, P., Liu, W.
PDB entry 8ilb: The complexes of RbcL, AtRaf1 and AtBSD2 (LFB)
Classification: LYASE/CHAPERONE
Source organism: Arabidopsis thaliana; Synechococcus elongatus PCC 6301
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-03-03
Authors: Wang, R., Song, H., Zhang, W., Wang, N., Zhang, S., Shao, R.
PDB entry 8ilc: Crystal structure of Se-Met CoV-Y domain of Nsp3 in SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-03-03
Authors: Wang, K., Nan, J., Lei, J.
PDB entry 8ild: The crystal structure of native dGTP:DNApre-I:Pol X substrate ternary complex
Classification: REPLICATION/DNA
Source organism: African swine fever virus (strain Badajoz 1971 Vero-adapted); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-03-03
Authors: Qin, T., Chen, Y.Q., Gan, J.H., Huang, Z.
PDB entry 8ile: The crystal structure of dGTPalphaSe-Rp:DNApre-II:Pol X substrate ternary complex
Classification: REPLICATION/DNA
Source organism: African swine fever virus (strain Badajoz 1971 Vero-adapted); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-03-03
Authors: Qin, T., Gan, J.H., Huang, Z.
PDB entry 8ilf: The crystal structure of dGTPalphaSe-Sp:DNApre-II:Pol X substrate ternary complex
Classification: REPLICATION/DNA
Source organism: African swine fever virus (strain Badajoz 1971 Vero-adapted); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-03-03
Authors: Qin, T., Zhao, Q.W., Gan, J.H., Huang, Z.
PDB entry 8ilg: The crystal structure of dG-DNA:Pol X product binary complex
Classification: REPLICATION/DNA
Source organism: African swine fever virus (strain Badajoz 1971 Vero-adapted); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.805 Å
Deposited: 2023-03-03
Authors: Qin, T., Gan, J.H., Huang, Z.
PDB entry 8ilh: The crystal structure of dG(Se-Sp)-DNA:Pol X product binary complex
Classification: REPLICATION/DNA
Source organism: African swine fever virus (strain Badajoz 1971 Vero-adapted); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-03-03
Authors: Qin, T., Gan, J.H., Huang, Z.
PDB entry 8ili: The crystal structure of dG(Se-Rp)-DNA:Pol X product binary complex
Classification: REPLICATION/DNA
Source organism: African swine fever virus (strain Badajoz 1971 Vero-adapted); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-03-03
Authors: Qin, T., Gan, J.H., Huang, Z.
PDB entry 8ilj: S-formylglutathione hydrolase (BuSFGH) from Burkholderiaceae sp.
Classification: HYDROLASE
Source organism: Burkholderiaceae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2023-03-03
Authors: Hwang, J., Lee, J.H., Do, H.
PDB entry 8ilk: Crystal structure of a highly photostable and bright green fluorescent protein at pH8.5
Classification: FLUORESCENT PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-03-03
Authors: Ago, H., Ando, R., Hirano, M., Shimozono, S., Miyawaki, A., Yamamoto, M.
PDB entry 8ill: Crystal structure of a highly photostable and bright green fluorescent protein at pH5.6
Classification: FLUORESCENT PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-03-03
Authors: Ago, H., Ando, R., Hirano, M., Shimozono, S., Miyawaki, A., Yamamoto, M.
PDB entry 8ilm: The cryo-EM structure of eight Rubisco large subunits (RbcL), two Arabidopsis thaliana Rubisco accumulation factors 1 (AtRaf1), and seven Arabidopsis thaliana Bundle Sheath Defective 2 (AtBSD2)
Classification: LYASE/CHAPERONE
Source organism: Arabidopsis thaliana; Synechococcus elongatus PCC 6301
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-03-03
Authors: Wang, R., Song, H., Zhang, W., Wang, N., Zhang, S., Shao, R.
PDB entry 8ilq: Structure of SFTSV Gn-Gc heterodimer
Classification: VIRAL PROTEIN
Source organism: Severe fever with thrombocytopenia syndrome virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-03-04
Authors: Du, S., Peng, R., Qi, J., Li, C.
PDB entry 8ilr: Cryo-EM structure of PI3Kalpha in complex with compound 16
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-03-04
Authors: Zhou, Q., Liu, X., Neri, D., Li, W., Favalli, N., Bassi, G., Yang, S., Yang, D., Vogt, P.K., Wang, M.-W.
PDB entry 8ils: Cryo-EM structure of PI3Kalpha in complex with compound 17
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-03-04
Authors: Zhou, Q., Liu, X., Neri, D., Li, W., Favalli, N., Bassi, G., Yang, S., Yang, D., Vogt, P.K., Wang, M.-W.
PDB entry 8ilt: Crystal structure of Est30
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2023-03-04
Authors: Feng, Y., Luo, Z.
PDB entry 8ilu: Crystal structure of mouse Galectin-3 in complex with small molecule inhibitor
Classification: SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-04
Authors: Kumar, A., Jinal, S., Raman, S., Ghosh, K.
PDB entry 8ilv: Cryo-EM structure of PI3Kalpha in complex with compound 18
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2023-03-04
Authors: Zhou, Q., Liu, X., Neri, D., Li, W., Favalli, N., Bassi, G., Yang, S., Yang, D., Vogt, P.K., Wang, M.-W.
PDB entry 8ilw: Transcription factor LMX1a homeobox domain in complex with Pitx3 promoter
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.712 Å
Deposited: 2023-03-04
Authors: Lv, M.Q., Lin, L.Q.
PDB entry 8ilx: mCherry-LaM3 complex
Classification: FLUORESCENT PROTEIN/IMMUNE SYSTEM
Source organism: Anaplasma marginale; Camelus bactrianus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2023-03-05
Authors: Liang, H., Liu, R., Ding, Y.
PDB entry 8ily: Crystal structure of the RRM domain of human SETD1A
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-03-05
Authors: Bao, S., Xu, C.
PDB entry 8ilz: Crystal structure of the RRM domain of human SETD1B
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-03-05
Authors: Bao, S., Xu, C.
PDB entry 8im0: mCherry-LaM8 complex
Classification: FLUORESCENT PROTEIN/IMMUNE SYSTEM
Source organism: Anaplasma marginale; Camelus bactrianus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2023-03-05
Authors: Liang, H., Liu, R., Ding, Y.
PDB entry 8im1: mCherry-LaM1 complex
Classification: FLUORESCENT PROTEIN/IMMUNE SYSTEM
Source organism: Anaplasma marginale; Camelus bactrianus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-03-05
Authors: Liang, H., Liu, R., Ding, Y.
PDB entry 8im2: Crystal structure of human HPPD complexed with NTBC
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2023-03-05
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8im3: Crystal structure of human HPPD complexed with compound a10
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2023-03-05
Authors: Dong, J., Lin, H.-Y.
PDB entry 8im5: Solution structure of the mouse HOIL1-L NZF domain in the free form
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2023-03-06
Authors: Walinda, E., Morimoto, D.
PDB entry 8im6: Crystal structure of HCoV 229E main protease in complex with PF07304814
Classification: VIRAL PROTEIN
Source organism: Human coronavirus 229E
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-03-06
Authors: Zhou, Y.R., Zeng, P., Zhang, J., Li, J.
PDB entry 8im7: Human gamma-secretase treated with ganglioside GM1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-03-06
Authors: Zhou, R., Yang, G., Shi, Y.
PDB entry 8im8: Crystal structure of Periplasmic alpha-amylase (MalS) from E.coli
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-03-06
Authors: An, Y., Park, J.T., Park, K.H., Woo, E.J.
PDB entry 8ima: Filament structure of GAC with phosphate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-03-06
Authors: Guo, C.J., Liu, J.L.
PDB entry 8imb: Filament interface structure of GAC with phosphate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-03-06
Authors: Guo, C.J., Liu, J.L.
PDB entry 8imd: Crystal structure of Cu/Zn Superoxide dismutase from Paenibacillus lautus
Classification: OXIDOREDUCTASE
Source organism: Paenibacillus lautus NBRC 15380
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-03-06
Authors: Narikiyo, S., Furukawa, Y., Akutsu, M.
PDB entry 8ime: Human cGAS catalytic domain bound with baicalin
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2023-03-06
Authors: Zhao, W.F., Xu, Y.C.
PDB entry 8imf: Human cGAS catalytic domain bound with baicalein
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-03-06
Authors: Zhao, W.F., Xu, Y.C.
PDB entry 8img: Human cGAS catalytic domain bound with C20
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-06
Authors: Zhao, W.F., Li, J.M., Xu, Y.C.
PDB entry 8imh: Solution structure of the N terminal domain of MazE9 antitoxin (nMazE9) from Mycobacterium tuberculosis
Classification: ANTITOXIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: SOLUTION NMR
Deposited: 2023-03-06
Authors: Basu Roy, T., Sarma, S.P.
PDB entry 8imi: A1-A2, A3-A4, B'1-B'2, C'1-C'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster A)
Classification: PHOTOSYNTHESIS
Source organism: Anthocerotibacter panamensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2023-03-07
Authors: Wang, C.H., Yang, C.H., Wu, H.Y., Jiang, H.W., Ho, M.C., Ho, M.Y.
PDB entry 8imj: A'1-A'2, A'3-A'4, B1-B2, C1-C2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster B)
Classification: PHOTOSYNTHESIS
Source organism: Anthocerotibacter panamensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2023-03-07
Authors: Wang, C.H., Yang, C.H., Wu, H.Y., Jiang, H.W., Ho, M.C., Ho, M.Y.
PDB entry 8imk: D3-D4, D1-D2, D'3-D'4, D'1-D'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster C)
Classification: PHOTOSYNTHESIS
Source organism: Anthocerotibacter panamensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2023-03-07
Authors: Wang, C.H., Yang, C.H., Wu, H.Y., Jiang, H.W., Ho, M.C., Ho, M.Y.
PDB entry 8iml: Rs2I-Rs2II, Rs1I-Rs1II, RbI-RbII cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster D)
Classification: PHOTOSYNTHESIS
Source organism: Anthocerotibacter panamensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2023-03-07
Authors: Wang, C.H., Yang, C.H., Wu, H.Y., Jiang, H.W., Ho, M.C., Ho, M.Y.
PDB entry 8imm: Rs2'I-Rs2'II, Rs1'I-Rs1'II, Rb'I-Rb'II cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster E)
Classification: PHOTOSYNTHESIS
Source organism: Anthocerotibacter panamensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2023-03-07
Authors: Wang, C.H., Yang, C.H., Wu, H.Y., Jiang, H.W., Ho, M.C., Ho, M.Y.
PDB entry 8imn: Rt1I-Rt1II, Rt2'I-Rt2'II, Rt3I-Rt3II cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster F)
Classification: PHOTOSYNTHESIS
Source organism: Anthocerotibacter panamensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2023-03-07
Authors: Wang, C.H., Yang, C.H., Wu, H.Y., Jiang, H.W., Ho, M.C., Ho, M.Y.
PDB entry 8imo: Rt1'I-Rt1'II, Rt2I-Rt2II, Rt3'I-Rt3'II cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster G)
Classification: PHOTOSYNTHESIS
Source organism: Anthocerotibacter panamensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2023-03-07
Authors: Wang, C.H., Yang, C.H., Wu, H.Y., Jiang, H.W., Ho, M.C., Ho, M.Y.
PDB entry 8imq: Adaptive mutation is mediated by MsyB via its interaction with nucleoid-associated proteins HU and beta-clamp
Classification: PROTEIN BINDING
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 2023-03-07
Authors: Liu, B., Chen, H.
PDB entry 8imr: Structure of ligand-free human macrophage migration inhibitory factor
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-03-07
Authors: Sugishima, K., Noguchi, K., Yohda, M., Odaka, M., Matsumura, H.
PDB entry 8ims: Crystal structure of TRAF7 coiled-coil domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-03-07
Authors: Hu, R., Lin, L., Lu, Q.
PDB entry 8imu: Dihydroxyacid dehydratase (DHAD) mutant-V497F
Classification: LYASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-03-07
Authors: Zhou, J., Zang, X., Tang, Y., Yan, Y.
PDB entry 8imw: Crystal structure of response regulator PmrA receiver domain
Classification: DNA BINDING PROTEIN
Source organism: Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG       19606 / CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-03-07
Authors: Ouyang, Z., Wen, Y.
PDB entry 8imx: Cryo-EM structure of GPI-T with a chimeric GPI-anchored protein
Classification: MEMBRANE PROTEIN
Source organism: Clavularia sp.; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2023-03-07
Authors: Xu, Y., Li, T., Qu, Q., Li, D.
PDB entry 8imy: Cryo-EM structure of GPI-T (inactive mutant) with GPI and proULBP2, a proprotein substrate
Classification: MEMBRANE PROTEIN
Source organism: Clavularia sp.; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-03-07
Authors: Li, T., Xu, Y., Qu, Q., Li, D.
PDB entry 8imz: Cryo-EM structure of mouse Piezo1-MDFIC complex (composite map)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2023-03-07
Authors: Zhou, Z., Ma, X., Lin, Y., Cheng, D., Bavi, N., Li, J.V., Sutton, D., Yao, M., Harvey, N., Corry, B., Zhang, Y., Cox, C.D.
PDB entry 8in0: Structure of the Keap1 Kelch domain in complex with PGAM5-derived peptide
Classification: CYTOSOLIC PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-08
Authors: Jiang, L., Wang, C.
PDB entry 8in1: beta-glucosidase protein from Aplysia kurodai
Classification: HYDROLASE
Source organism: Aplysia kurodai
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-03-08
Authors: Sun, X.M., Ye, Y.X., Kato, K., Yu, J., Yao, M.
PDB entry 8in2: 4,5-DOPA-extradiol-dioxygenase from Beta vulgaris
Classification: OXIDOREDUCTASE
Source organism: Beta vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2023-03-08
Authors: Chiang, C.C., Hsu, C.H.
PDB entry 8in3: Eisenia hydrolysis-enhancing protein from Aplysia kurodai
Classification: UNKNOWN FUNCTION
Source organism: Aplysia kurodai
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2023-03-08
Authors: Sun, X.M., Ye, Y.X., Kato, K., Yu, J., Yao, M.
PDB entry 8in4: Eisenia hydrolysis-enhancing protein from Aplysia kurodai
Classification: UNKNOWN FUNCTION
Source organism: Aplysia kurodai
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-03-08
Authors: Sun, X.M., Ye, Y.X., Kato, K., Yu, J., Yao, M.
PDB entry 8in6: Eisenia hydrolysis-enhancing protein from Aplysia kurodai complex with tannic acid
Classification: UNKNOWN FUNCTION
Source organism: Aplysia kurodai
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-03-08
Authors: Sun, X.M., Ye, Y.X., Kato, K., Yu, J., Yao, M.
PDB entry 8in7: Crystal structure of UGT74AN3-UDP
Classification: TRANSFERASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-03-08
Authors: Feng, L., Wei, H.
PDB entry 8in8: Cryo-EM structure of the target ssDNA-bound SIR2-APAZ/Ago-gRNA quaternary complex
Classification: ANTIVIRAL PROTEIN
Source organism: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-03-08
Authors: Zhang, H., Li, Z., Yu, G.M., Li, X.Z., Wang, X.S.
PDB entry 8in9: The structure of the GfsA KSQ-AT didomain in complex with the GfsA ACP domain
Classification: LYASE
Source organism: Streptomyces graminofaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2023-03-09
Authors: Chisuga, T., Murakami, S., Miyanaga, A., Kudo, F., Eguchi, T.
PDB entry 8ina: Crystal structure of UGT74AN3-UDP
Classification: TRANSFERASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2023-03-09
Authors: Long, F., Huang, W.
PDB entry 8inb: Cryo-EM structure of Cas12j-SF05-crRNA-dsDNA complex
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Biggievirus Mos11; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-03-09
Authors: Zhang, X., Duan, Z.Q., Zhu, J.K.
PDB entry 8ind: Crystal structure of UGT74AN3-UDP-RES
Classification: TRANSFERASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-03-09
Authors: Huang, W.
PDB entry 8ine: human nuclear pre-60S ribosomal particle - State G'
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-03-09
Authors: Zhang, Y., Gao, N.
PDB entry 8inf: human nuclear pre-60S ribosomal particle - State F'
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-03-09
Authors: Zhang, Y., Gao, N.
PDB entry 8ing: Structure of the ternary complex of lactoperoxidase with substrate nitric oxide (NO) and product nitrite ion (NO2) at 1.98 A resolution
Classification: OXIDOREDUCTASE
Source organism: Capra hircus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-03-09
Authors: Ahmad, M.I., Viswanathan, V., Kumar, M., Singh, R.P., Singh, A.K., Sinha, M., Kaur, P., Sharma, P., Sharma, S., Singh, T.P.
PDB entry 8inh: ZjOGT3, flavonoid 7,4'-di-O-glycosyltransferase
Classification: PLANT PROTEIN
Source organism: Ziziphus jujuba var. spinosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-03-09
Authors: Wang, Z.L., Wang, H.D., Li, F.D., Ye, M.
PDB entry 8ini: vaccinia H2 protein without the transmembrane region
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-03-10
Authors: Liu, C.Y., Ko, T.P., Wang, H.C., Chang, W.
PDB entry 8inj: Crystal structure of UGT74AN3-UDP-DIG
Classification: TRANSFERASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-03-10
Authors: Feng, L., Wei, H.
PDB entry 8ink: human nuclear pre-60S ribosomal particle - State D
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-03-10
Authors: Zhang, Y., Gao, N.
PDB entry 8inl: LSD1 in complex with S2172
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2023-03-10
Authors: Niwa, H., Sato, S., Umehara, T.
PDB entry 8ino: Crystal structure of UGT74AN3 in complex UDP and PER
Classification: TRANSFERASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-03-10
Authors: Long, F., Huang, W.
PDB entry 8inp: A reversible glycosyltransferase of tectorigenin - Bc7OUGT
Classification: TRANSFERASE
Source organism: Iris domestica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2023-03-10
Authors: Zhang, Z.Y., Lu, L., Guan, Z.F., Cheng, W.J.
PDB entry 8inq: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) G15S Mutant
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-03-10
Authors: Lin, M., Liu, X.
PDB entry 8inr: Cryo-EM structure of the alpha-MSH-bound human melanocortin receptor 5 (MC5R)-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Influenza A virus (A/Victoria/3/1975(H3N2)); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2023-03-10
Authors: Feng, W.B., Zhou, Q.T., Chen, X.Y., Dai, A.T., Cai, X.Q., Liu, X., Zhao, F.H., Chen, Y., Ye, C.Y., Xu, Y.N., Cong, Z.T., Li, H., Lin, S., Yang, D.H., Wang, M.W.
PDB entry 8int: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) K90R Mutant
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2023-03-10
Authors: Lin, M., Liu, X.
PDB entry 8inu: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) G15S Mutant in Complex with Inhibitor nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-03-10
Authors: Lin, M., Liu, X.
PDB entry 8inv: Crystal structure of UGT74AN3-UDP-BUF
Classification: TRANSFERASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-03-10
Authors: Long, F., Huang, W.
PDB entry 8inw: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) K90R Mutant in Complex with Inhibitor nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-03-10
Authors: Lin, M., Liu, X.
PDB entry 8inx: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) G15S Mutant in Complex with Inhibitor ensitrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2023-03-10
Authors: Lin, M., Liu, X.
PDB entry 8iny: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) K90R Mutant in Complex with Inhibitor ensitrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2023-03-10
Authors: Lin, M., Liu, X.
PDB entry 8inz: Cryo-EM structure of human HCN3 channel in apo state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-03-10
Authors: Yu, B., Lu, Q.Y., Li, J., Zhang, J.