LiteFold/PDB huggingface dataset:
PDB entry 5vhv: Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an oxocarbenium-intermediate analog
Classification: HYDROLASE/DNA
Source organism: Pseudomonas fluorescens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2017-04-13
Authors: Shi, R., Eichman, B.F.
PDB entry 5vhw: GluA2-0xGSG1L bound to ZK
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.8 Å
Deposited: 2017-04-13
Authors: Twomey, E.C., Yelshanskaya, M.V., Grassucci, R.A., Frank, J., Sobolevsky, A.I.
PDB entry 5vhx: GluA2-1xGSG1L bound to ZK
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.3 Å
Deposited: 2017-04-13
Authors: Twomey, E.C., Yelshanskaya, M.V., Grassucci, R.A., Frank, J., Sobolevsky, A.I.
PDB entry 5vhy: GluA2-2xGSG1L bound to ZK
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2017-04-13
Authors: Twomey, E.C., Yelshanskaya, M.V., Grassucci, R.A., Frank, J., Sobolevsky, A.I.
PDB entry 5vhz: GluA2-2xGSG1L bound to L-Quisqualate
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.4 Å
Deposited: 2017-04-13
Authors: Twomey, E.C., Yelshanskaya, M.V., Grassucci, R.A., Frank, J., Sobolevsky, A.I.
PDB entry 5vi0: Pseudomonas fluorescens alkylpurine DNA glycosylase AlkC bound to DNA containing an abasic site analog
Classification: HYDROLASE/DNA
Source organism: Pseudomonas fluorescens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.396 Å
Deposited: 2017-04-13
Authors: Shi, R., Eichman, B.F.
PDB entry 5vi4: IL-33/ST2/IL-1RAcP ternary complex structure
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.792 Å
Deposited: 2017-04-13
Authors: Guenther, S., Sundberg, E.J.
PDB entry 5vi5: Structure of Mycobacterium smegmatis transcription initiation complex with a full transcription bubble
Classification: TRANSCRIPTION
Source organism: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.196 Å
Deposited: 2017-04-14
Authors: Darst, S.A., Campbell, E.A., Lilic, M.
PDB entry 5vi6: Crystal structure of histone deacetylase 8 in complex with trapoxin A
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.237 Å
Deposited: 2017-04-14
Authors: Porter, N.J., Christianson, D.W.
PDB entry 5vi7: Crystal structure of the Zika virus NS3 helicase
Classification: VIRAL PROTEIN
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.005 Å
Deposited: 2017-04-14
Authors: Bukrejewska, M., Derewenda, U., Derewenda, Z.S.
PDB entry 5vi8: Structure of a mycobacterium smegmatis transcription initiation complex with an upstream-fork promoter fragment
Classification: TRANSCRIPTION
Source organism: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2017-04-14
Authors: Hubin, E.A., Campbell, E.A., Darst, S.A.
PDB entry 5vi9: Crystal structure of Protein Kinase A in complex with the PKI peptide and Aminobenzothiazole based inhibitors
Classification: TRANSFERASE
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-04-14
Authors: Judge, R.A.
PDB entry 5via: Crystal structural of Leishmania major pseudoperoxidase
Classification: OXIDOREDUCTASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.764 Å
Deposited: 2017-04-14
Authors: Chreifi, G., Dejam, D., Poulos, T.L.
PDB entry 5vib: Crystal structure of Protein Kinase A in complex with the PKI peptide and Aminobenzothiazole based inhibitors
Classification: TRANSFERASE
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2017-04-14
Authors: Judge, R.A.
PDB entry 5vic: Crystal structure of anti-Zika antibody Z004 bound to DENV-1 Envelope protein DIII
Classification: IMMUNE SYSTEM
Source organism: Dengue virus type 1 (strain Nauru/West Pac/1974); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2017-04-14
Authors: Keeffe, J.R., West Jr., A.P., Gristick, H.B., Bjorkman, P.J.
PDB entry 5vid: Receptor binding domain of BoNT/B in complex with mini-protein binder Bot.0671.2
Classification: TOXIN
Source organism: Clostridium botulinum; unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2017-04-15
Authors: Jin, R., Lam, K., Yao, G.
PDB entry 5vie: Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-04-15
Authors: Jiang, J., Li, B., Hu, C.-W., Worth, M., Fan, D., Li, H.
PDB entry 5vif: Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2017-04-15
Authors: Jiang, J., Li, B., Hu, C.-W., Worth, M., Fan, D., Li, H.
PDB entry 5vig: Crystal structure of anti-Zika antibody Z006 bound to Zika virus envelope protein DIII
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2017-04-16
Authors: Keeffe, J.R., West Jr., A.P., Gristick, H.B., Bjorkman, P.J.
PDB entry 5vih: Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist, 4-fluorophenyl-ACEPC
Classification: TRANSPORT PROTEIN, RECEPTOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-04-16
Authors: Mou, T.-C., Conti, P., Pinto, A., Tamborini, L., Sprang, S.R., Hansen, K.B.
PDB entry 5vii: Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist, 4-(3-fluoropropyl)phenyl-ACEPC
Classification: TRANSPORT PROTEIN, RECEPTOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.951 Å
Deposited: 2017-04-16
Authors: Mou, T.-C., Conti, P., Pinto, A., Tamborini, L., Sprang, S.R., Hansen, K.B.
PDB entry 5vij: Crystal structure of GluN1/GluN2A NMDA receptor agonist binding domains with glycine and antagonist, 4-bromophenyl-ACEPC
Classification: TRANSPORT PROTEIN, RECEPTOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.105 Å
Deposited: 2017-04-16
Authors: Mou, T.-C., Conti, P., Pinto, A., Tamborini, L., Sprang, S.R., Hansen, K.B.
PDB entry 5vik: Crystal structure of monomeric near-infrared fluorescent protein miRFP703
Classification: FLUORESCENT PROTEIN
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2017-04-17
Authors: Pletnev, S.
PDB entry 5vil: Crystal structure of ASK1 kinase domain with a potent inhibitor (analog 6)
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2017-04-17
Authors: Jasti, J., Chang, J., Kurumbail, R.
PDB entry 5vim: Crystal structure of the Zika virus NS5 methyltransferase.
Classification: VIRAL PROTEIN
Source organism: Zika virus (strain Mr 766)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-04-17
Authors: Bukrejewska, M., Derewenda, Z.S., Derewenda, U.
PDB entry 5vin: Crystal Structure of the R515Q missense variant of human PGM1
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.60004 Å
Deposited: 2017-04-17
Authors: Stiers, K.M., Beamer, L.J.
PDB entry 5vio: Crystal structure of ASK1 kinase domain with a potent inhibitor (analog 13)
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2017-04-17
Authors: Jasti, J., Chang, J., Kurumbail, R.
PDB entry 5vip: Crystal structure of Pseudomonas malonate decarboxylase MdcD-MdcE hetero-dimer
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.857 Å
Deposited: 2017-04-17
Authors: Maderbocus, R., Tong, L.
PDB entry 5viq: Crystal structure of monomeric near-infrared fluorescent protein miRFP709
Classification: FLUORESCENT PROTEIN
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2017-04-17
Authors: Pletnev, S.
PDB entry 5vir: Crystal structure of probable nicotinate-nucleotide adenylyltransferase from Mycobacterium abscessus in complex with NADP and compound FOL0091
Classification: TRANSFERASE
Source organism: Mycobacterium abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-04-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vis: 1.73 Angstrom Resolution Crystal Structure of Dihydropteroate Synthase (folP-SMZ_B27) from Soil Uncultured Bacterium.
Classification: HYDROLASE,OXIDOREDUCTASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2017-04-17
Authors: Minasov, G., Wawrzak, Z., Di Leo, R., Skarina, T., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5vit: Crystal structure of a Pseudomonas malonate decarboxylase hetero-tetramer in complex with malonate
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.203 Å
Deposited: 2017-04-17
Authors: Maderbocus, R., Tong, L.
PDB entry 5viu: Crystal Structure of Acetylornithine Aminotransferase from Elizabethkingia anophelis
Classification: TRANSFERASE
Source organism: Elizabethkingia anophelis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2017-04-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5viv: Crystal structure of monomeric near-infrared fluorescent protein miRFP670
Classification: FLUORESCENT PROTEIN
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2017-04-17
Authors: Pletnev, S.
PDB entry 5vix: Crystal structure of Polyubiquitin with 3 ub domains, domains 1 and 2, from Naegleria fowleri ATCC 30863
Classification: UNKNOWN FUNCTION
Source organism: Naegleria fowleri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2017-04-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5viy: BG505 SOSIP.664 in complex with broadly neutralizing antibodies BG1 and 8ANC195
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2017-04-17
Authors: Wang, H., Bjorkman, P.J.
PDB entry 5viz: X-Ray structure of Insulin Glargine
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-04-17
Authors: Reyes-Grajeda, J.P., Romero, A.
PDB entry 5vj0: Crystal Structure of heme-containing DyP Type Peroxidase from Enterobacter lignolyticus
Classification: OXIDOREDUCTASE
Source organism: Enterobacter lignolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2017-04-17
Authors: Meekins, D.A., Li, P., Geisbrecht, B.V.
PDB entry 5vj1: Crystal structure of a Pseudomonas malonate decarboxylase hetero-tetramer in complex with coenzyme A
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.995 Å
Deposited: 2017-04-18
Authors: Maderbocus, R., Tong, L.
PDB entry 5vj2: Structure of human respiratory syncytial virus non-structural protein 1 (NS1)
Classification: VIRAL PROTEIN
Source organism: Respiratory syncytial virus type A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2017-04-18
Authors: Leung, D.W., Borek, D.M., Amarasinghe, G.K.
PDB entry 5vj3: HIV Protease (PR) in open form with Mg2+ in active site and HIVE-9 in eye site
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-04-18
Authors: Tiefenbrunn, T., Stout, C.D.
PDB entry 5vj4: Crystal structure of a putative surface protein encoded by BTA121
Classification: LIPID BINDING PROTEIN
Source organism: Borrelia turicatae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-04-18
Authors: Luo, Z., Asojo, O.
PDB entry 5vj5: Horse Liver Alcohol Dehydrogenase Complexed with 1,10-Phenanthroline
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-04-18
Authors: Plapp, B.V., Baskar Raj, S., Ramaswamy, S.
PDB entry 5vj6: BG505 SOSIP.664 in complex with broadly neutralizing antibodies PG9 and 8ANC195
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.5 Å
Deposited: 2017-04-18
Authors: Wang, H., Bjorkman, P.J.
PDB entry 5vj7: Ferredoxin NADP Oxidoreductase (Xfn)
Classification: OXIDOREDUCTASE
Source organism: Pyrococcus furiosus COM1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2017-04-18
Authors: Zadvornyy, O.A., Nguyen, D.M.N., Schut, G.J., Lipscomb, G.L., Tokmina-Lukaszewska, M., Adams, M.W.W., Peters, J.W.
PDB entry 5vj8: Backbone structure of the Yersinia pestis outer membrane protein Ail in phospholipid bilayer nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Yersinia pestis
Experimental method: SOLUTION NMR
Deposited: 2017-04-19
Authors: Dutta, S.K., Yong, Y., Marassi, F.M.
PDB entry 5vj9: Guanidine-II riboswitch P2 hairpin dimer from Pseudomonas aeruginosa
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2017-04-19
Authors: Reiss, C.W., Strobel, S.A.
PDB entry 5vja: Crystal Structure of human zipper-interacting protein kinase (ZIPK, alias DAPK3) in complex with a pyrazolo[3,4-d]pyrimidinone ligand (HS38)
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2017-04-19
Authors: Carlson, D.A., Singer, M.R., Sutherland, C., Redondo, C., Alexander, L., Hughes, P.F., Knapp, S., MacDonald, J.A., Haystead, T.A.J.
PDB entry 5vjb: Guanidine-II riboswitch P2 hairpin dimer with 5-bromoU substitution from Pseudomonas aeruginosa
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-04-19
Authors: Reiss, C.W., Strobel, S.A.
PDB entry 5vjc: TOG-tubulin binding specificity promotes microtubule dynamics and mitotic spindle formation
Classification: CELL CYCLE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-04-19
Authors: Byrnes, A.E., Slep, K.C.
PDB entry 5vjd: Class II fructose-1,6-bisphosphate aldolase of Escherichia coli with DHAP
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2017-04-19
Authors: Sygusch, J., Coincon, M.
PDB entry 5vje: Class II fructose-1,6-bisphosphate aldolase of Escherichia coli with D-glucitol 1,6-bisphosphate
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2017-04-19
Authors: Coincon, M., Sygusch, J.
PDB entry 5vjf: Class II fructose-1,6-bisphosphate aldolase of Helicobacter pylori with DHAP
Classification: LYASE
Source organism: Helicobacter pylori (strain ATCC 700392 / 26695)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2017-04-19
Authors: Coincon, M., Sygusch, J.
PDB entry 5vjg: horse liver alcohol dehydrogenase complexed with 2,2'bipyridine
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-04-19
Authors: Plapp, B.V., Baskar Raj, S.
PDB entry 5vjh: Closed State CryoEM Reconstruction of Hsp104:ATPyS and FITC casein
Classification: CHAPERONE
Source organism: Bos taurus; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2017-04-19
Authors: Gates, S.N., Yokom, A.L., Lin, J.-B., Jackrel, M.E., Rizo, A.N., Kendsersky, N.M., Buell, C.E., Sweeny, E.A., Chuang, E., Torrente, M.P., Mack, K.L., Su, M., Shorter, J., Southworth, D.R.
PDB entry 5vji: Crystal structure of the CLOCK Transcription Domain Exon19 in Complex with a Repressor
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2017-04-19
Authors: Hou, Z., Su, L., Pei, J., Grishin, N.V., Zhang, H.
PDB entry 5vjj: Crystal structure of the flax-rust effector AvrP
Classification: METAL BINDING PROTEIN
Source organism: Melampsora lini
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2017-04-19
Authors: Zhang, X., Ericsson, D.J., Williams, S.J., Kobe, B.
PDB entry 5vjk: Crystal structure of H7 hemagglutinin mutant (V186K, K193T, G228S) from the influenza virus A/Shanghai/2/2013 (H7N9)
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.593 Å
Deposited: 2017-04-19
Authors: Zhu, X., Wilson, I.A.
PDB entry 5vjl: Crystal structure of H7 hemagglutinin mutant (V186K, K193T, G228S) from the influenza virus A/Shanghai/2/2013 (H7N9) with LSTc
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.597 Å
Deposited: 2017-04-19
Authors: Zhu, X., Wilson, I.A.
PDB entry 5vjm: Crystal structure of H7 hemagglutinin mutant (V186K, K193T, G228S) from the influenza virus A/Shanghai/2/2013 (H7N9) with LSTa
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.909 Å
Deposited: 2017-04-19
Authors: Zhu, X., Wilson, I.A.
PDB entry 5vjn: Crystal Structure of Adenine Phosphoribosyltransferase from Saccharomyces cerevisiae Complexed with D-2,5-Dideoxy-2,5-Imino-Altritol 1,6-Bisphosphate (D-DIAB) and Adenine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2017-04-19
Authors: Harijan, R.K., Ducati, R.G., Bonanno, J.B., Almo, S.C., Schramm, V.L.
PDB entry 5vjo: Complex between HyHEL10 Fab fragment heavy chain mutant I29F and Pekin duck egg lysozyme isoform I (DEL-I)
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Anas platyrhynchos; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2017-04-19
Authors: Langley, D.B., Christ, D.
PDB entry 5vjp: Crystal Structure of Adenine Phosphoribosyltransferase from Saccharomyces cerevisiae Complexed with L-2,5-Dideoxy-2,5-Imino-Altritol 1,6-Bisphosphate (L-DIAB) and Adenine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2017-04-19
Authors: Harijan, R.K., Ducati, R.G., Bonanno, J.B., Almo, S.C., Schramm, V.L.
PDB entry 5vjq: Complex between HyHEL10 Fab fragment heavy chain mutant (I29F, S52T, Y53F) and Pekin duck egg lysozyme isoform I (DEL-I)
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Anas platyrhynchos; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-04-19
Authors: Langley, D.B., Christ, D.
PDB entry 5vjs: De Novo Photosynthetic Reaction Center Protein Equipped with Heme B, a synthetic Zn porphyrin, and Zn(II) cations
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-04-19
Authors: Ennist, N.M., Dutton, P.L., Stayrook, S.E., Moser, C.C.
PDB entry 5vjt: De Novo Photosynthetic Reaction Center Protein Equipped with Heme B and Zn(II) cations
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2017-04-19
Authors: Ennist, N.M., Stayrook, S.E., Dutton, P.L., Moser, C.C.
PDB entry 5vju: De Novo Photosynthetic Reaction Center Protein Variant Equipped with His-Tyr H-bond, Heme B, and Cd(II) ions
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2017-04-19
Authors: Ennist, N.M., Stayrook, S.E., Dutton, P.L., Moser, C.C.
PDB entry 5vjv: Rhizobiales-like phosphatase 2
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-04-20
Authors: Ng, K.K.S., Labandera, A., Moorhead, G.
PDB entry 5vjw: Arabidopsis thaliana Rhizobiales-like phosphatase 2 complexed with tungstate
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-04-20
Authors: Ng, K.K.S., Labandera, A., Moorhead, G.
PDB entry 5vjx: Crystal structure of the CLOCK Transcription Domain Exon19 in Complex with a Repressor
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.695 Å
Deposited: 2017-04-20
Authors: Hou, Z., Su, L., Pei, J., Grishin, N.V., Zhang, H.
PDB entry 5vjy: Crystal Structure of dUTP pyrophosphatase protein, from Naegleria fowleri
Classification: HYDROLASE
Source organism: Naegleria fowleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-04-20
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vjz: Joint X-ray/neutron structure of aspartate aminotransferase with alpha-methyl-aspartate at pH 7.5
Classification: TRANSFERASE
Source organism: Sus scrofa
Experimental method: NEUTRON DIFFRACTION, X-RAY DIFFRACTION
Deposited: 2017-04-20
Authors: Dajnowicz, S., Kovalevsky, A.Y., Mueser, T.C.
PDB entry 5vk0: Crystal structure of human MDM2 in complex with a 12-mer lysine-cysteine side chain dithiocarbamate stapled peptide inhibitor PMI
Classification: LIGASE/LIGASE INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-04-20
Authors: Tolbert, W.D., Gohain, N., Pazgier, M.
PDB entry 5vk1: Crystal structure of human MDM4 in complex with a 12-mer lysine-cysteine side chain dithiocarbamate stapled peptide inhibitor PMI
Classification: SIGNALING PROTEIN/INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2017-04-20
Authors: Tolbert, W.D., Gohain, N., Pazgier, M.
PDB entry 5vk2: Structural basis for antibody-mediated neutralization of Lassa virus
Classification: VIRAL PROTEIN/Immune system
Source organism: Homo sapiens; Lassa virus; Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.201 Å
Deposited: 2017-04-20
Authors: Hastie, K.M., Zandonatti, M.A., Kleinfelter, L.M., Rowland, M.L., Rowland, M.M., Chandra, K., Branco, L.M., Robinson, J.E., Garry, R.F., Saphire, E.O.
PDB entry 5vk3: Apo ctPRC2 with E840A and K852D mutations in Ezh2
Classification: TRANSFERASE
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.114 Å
Deposited: 2017-04-20
Authors: Bratkowski, M.A., Liu, X.
PDB entry 5vk4: Crystal structure of a phosphoribosylformylglycinamidine cyclo-ligase from Neisseria gonorrhoeae bound to AMPPNP and magnesium
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2017-04-20
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vk6: Open conformation of KcsA non-inactivating E71A mutant
Classification: IMMUNE SYSTEM/TRANSPORT PROTEIN
Source organism: Mus musculus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2017-04-21
Authors: Cuello, L.G., Perozo, E.
PDB entry 5vk7: aspartate aminotransferase pH 4.0
Classification: TRANSFERASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-04-21
Authors: Dajnowicz, S., Kovalevsky, A.Y., Mueser, T.C.
PDB entry 5vka: Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and N-omega-hydroxy-L-arginine
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas savastanoi pv. phaseolicola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.169 Å
Deposited: 2017-04-21
Authors: Fellner, M., Martinez, S., Hu, J., Hausinger, R.P.
PDB entry 5vkb: Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and argininamide
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas savastanoi pv. phaseolicola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.139 Å
Deposited: 2017-04-21
Authors: Fellner, M., Martinez, S., Hu, J., Hausinger, R.P.
PDB entry 5vkc: Crystal structure of MCL-1 in complex with a BIM competitive inhibitor
Classification: signaling protein/inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2017-04-21
Authors: Judge, R.A., Souers, A.J.
PDB entry 5vkd: Crystal structure of C-terminal domain of Ebola (Bundibugyo) nucleoprotein in complex with Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Bundibugyo ebolavirus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.749 Å
Deposited: 2017-04-21
Authors: Radwanska, M.J., Derewenda, U., Kossiakoff, A., Derewenda, Z.S.
PDB entry 5vke: Open conformation of KcsA deep-inactivated
Classification: IMMUNE SYSTEM/TRANSPORT PROTEIN
Source organism: Mus musculus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2017-04-21
Authors: Cuello, L.G., Perozo, E., Cortes, D.M.
PDB entry 5vkf: RHCC in complex with Naphthalene
Classification: TRANSPORT PROTEIN
Source organism: Staphylothermus marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.752 Å
Deposited: 2017-04-21
Authors: McDougall, M., Stetefeld, J.
PDB entry 5vkg: Solution-state NMR structural ensemble of human Tsg101 UEV in complex with tenatoprazole
Classification: cell cycle/inhibitor
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2017-04-21
Authors: Strickland, M., Ehrlich, L.S., Watanabe, S., Khan, M., Strub, M.-P., Luan, C.H., Powell, M.D., Leis, J., Tjandra, N., Carter, C.
PDB entry 5vkh: Closed conformation of KcsA Y82A-F103A mutant
Classification: IMMUNE SYSTEM/TRANSPORT PROTEIN
Source organism: Mus musculus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2017-04-21
Authors: Cuello, L.G., Perozo, E., Cortes, D.M.
PDB entry 5vki: Crystal structure of P[19] rotavirus VP8* complexed with mucin core 2
Classification: VIRAL PROTEIN
Source organism: Human rotavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-04-21
Authors: Xu, S., Liu, Y., Woodruff, A., Zhong, W., Jiang, X., Kennedy, M.A.
PDB entry 5vkj: Crystal structure of human CD22 Ig domains 1-3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2017-04-21
Authors: Julien, J.P., Ereno-Orbea, J., Sicard, T.
PDB entry 5vkk: Crystal structure of Fab fragment of anti-CD22 Epratuzumab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.014 Å
Deposited: 2017-04-21
Authors: Sicard, T., Ereno-Orbea, J., Julien, J.P.
PDB entry 5vkl: SPT6 tSH2-RPB1 1476-1500 pS1493
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2017-04-21
Authors: Sdano, M.A., Whitby, F.G., Hill, C.P.
PDB entry 5vkm: Crystal structure of human CD22 Ig domains 1-3 in complex with alpha 2-6 sialyllactose
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-04-21
Authors: Julien, J.P., Ereno-Orbea, J., Sicard, T.
PDB entry 5vko: SPT6 tSH2-RPB1 1468-1500 pT1471, pS1493
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-04-21
Authors: Sdano, M.A., Whitby, F.G., Hill, C.P.
PDB entry 5vkq: Structure of a mechanotransduction ion channel Drosophila NOMPC in nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2017-04-22
Authors: Jin, P., Bulkley, D., Guo, Y., Zhang, W., Guo, Z., Huynh, W., Wu, S., Meltzer, S., Chen, T., Jan, L.Y., Jan, Y.-N., Cheng, Y.
PDB entry 5vkr: Horse liver alcohol dehydrogenase complexed with adenosine-5-diphosphoribose
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-04-22
Authors: Plapp, B.V., Rubach, J.K., Ramaswamy, S.
PDB entry 5vks: Crystal structure of P[19] rotavirus VP8* complexed with LNFPI
Classification: VIRAL PROTEIN
Source organism: Human rotavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2017-04-22
Authors: Xu, S., Liu, Y., Woodruff, A., Zhong, W., Jiang, X., Kennedy, M.A.
PDB entry 5vkt: Cinnamyl alcohol dehydrogenases (SbCAD4) from Sorghum bicolor (L.) Moench
Classification: OXIDOREDUCTASE
Source organism: Sorghum bicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.827 Å
Deposited: 2017-04-22
Authors: Walker, A.M., Jun, S.Y., Kang, C.
PDB entry 5vku: An atomic structure of the human cytomegalovirus (HCMV) capsid with its securing layer of pp150 tegument protein
Classification: VIRUS
Source organism: Human cytomegalovirus (strain AD169)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2017-04-24
Authors: Yu, X., Jih, J., Jiang, J., Zhou, H.
PDB entry 5vkv: Solution NMR structure of the membrane electron transporter CcdA
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Experimental method: SOLUTION NMR
Deposited: 2017-04-24
Authors: Zhou, Y., Bushweller, J.H.
PDB entry 5vkw: Crystal structure of adenylosuccinate lyase ADE13 from Candida albicans
Classification: LYASE
Source organism: Candida albicans (strain SC5314 / ATCC MYA-2876)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.998 Å
Deposited: 2017-04-24
Authors: Stogios, P.J., Evdokimova, E., Di Leo, R., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5vkx: Coordination Chemistry within a Protein Host: Regulation of the Secondary Coordination Sphere
Classification: BIOTIN BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2017-04-24
Authors: Mann, S.I., Heinisch, T.
PDB entry 5vky: Yeast Tda2 (YER071C) - a dynein light chain family member that works independently of the dynein motor complex and microtubules.
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae (strain JAY291)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-04-24
Authors: McDonald, S.M., Di Pietro, S.M., Peersen, O.B.
PDB entry 5vkz: Crystal structure of Mdm12 and combinatorial reconstitution of Mdm12/Mmm1 ERMES complexes for structural studies
Classification: LIPID TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 4.1 Å
Deposited: 2017-04-24
Authors: Egea, P.F., AhYoung, A.P., Lu, B., Tan, H.R., Cascio, D.
PDB entry 5vl0: horse liver alcohol dehydrogenase complexed with NADH and N-benzyformamide
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2017-04-24
Authors: Plapp, B.V., Brown, E.N., Ramaswamy, S., Baskar Raj, S.
PDB entry 5vl1: Crystal Structure of Lysyl-tRNA Synthetase from Mycobacterium ulcerans complexed with L-lysine
Classification: LIGASE
Source organism: Mycobacterium ulcerans (strain Agy99)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-04-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vl2: The hapten triclocarban bound to the single domain camelid nanobody VHH T4
Classification: UNKNOWN FUNCTION
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-04-24
Authors: Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K.
PDB entry 5vl3: CD22 d1-d3 in complex with therapeutic Fab Epratuzumab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-04-24
Authors: Sicard, T., Ereno-Orbea, J., Julien, J.P.
PDB entry 5vl4: Accidental minimum contact crystal lattice formed by a redesigned protein oligomer
Classification: DE NOVO PROTEIN
Source organism: Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 4.1 Å
Deposited: 2017-04-24
Authors: Cannon, K.A., Cascio, D., Sawaya, M.R., Park, R., Boyken, S., King, N., Yeates, T.
PDB entry 5vl5: Coordination Chemistry within a Protein Host: Regulation of the Secondary Coordination Sphere
Classification: BIOTIN BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2017-04-24
Authors: Mann, S.I., Heinisch, T., Ward, T.R., Borovik, A.S.
PDB entry 5vl6: Peptide 38138 modified from fragment 21-37 of Plasmodium falciparum Cell-Traversal Protein for Ookinetes and Sporozoite (Pf-CelTOS)
Classification: CELL INVASION
Experimental method: SOLUTION NMR
Deposited: 2017-04-25
Authors: Bermudez, A., Patarroyo, M.E.
PDB entry 5vl7: PCSK9 complex with Fab33
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2017-04-25
Authors: Eigenbrot, C., Shia, S.
PDB entry 5vl8: Coordination Chemistry within a Protein Host: Regulation of the Secondary Coordination Sphere
Classification: BIOTIN BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-04-25
Authors: Mann, S.I., Heinisch, T., Ward, T.R., Borovik, A.S.
PDB entry 5vl9: Crystal structure of EilR in complex with eilO DNA element
Classification: TRANSCRIPTION/DNA
Source organism: Enterobacter lignolyticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2017-04-25
Authors: Pereira, J.H., Ruegg, T.L., Chen, J., Novichkov, P., DeGiovani, A., Tomaleri, G.P., Singer, S., Simmons, B., Thelen, M., Adams, P.D.
PDB entry 5vla: Short PCSK9 delta-P' complex with Fusion2 peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-04-25
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 5vlb: Crystal Structure of Medicago truncatula L-Histidinol Dehydrogenase in Complex with Imidazole
Classification: OXIDOREDUCTASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2017-04-25
Authors: Ruszkowski, M., Dauter, Z.
PDB entry 5vlc: Crystal Structure of Medicago truncatula L-Histidinol Dehydrogenase in Complex with L-Histidinol
Classification: OXIDOREDUCTASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2017-04-25
Authors: Ruszkowski, M., Dauter, Z.
PDB entry 5vld: Crystal Structure of Medicago truncatula L-Histidinol Dehydrogenase in Complex with L-Histidine and NAD+
Classification: OXIDOREDUCTASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2017-04-25
Authors: Ruszkowski, M., Dauter, Z.
PDB entry 5vle: Ultrahigh Resolution X-Ray Crystal Structure of Ruthenocene Conjugated Penicilloate and Penilloate Products in Complex with CTX-M-14 E166A Beta-Lactamase
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 0.85 Å
Deposited: 2017-04-25
Authors: Lewandowski, E.M., Chen, Y.
PDB entry 5vlg: Crystal structure of EilR in complex with malachite green
Classification: TRANSCRIPTION
Source organism: Enterobacter lignolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.932 Å
Deposited: 2017-04-25
Authors: Pereira, J.H., Ruegg, T.L., Chen, J., Novichkov, P., DeGiovani, A., Tomaleri, G.P., Singer, S., Simmons, B., Thelen, M., Adams, P.D.
PDB entry 5vlh: Short PCSK9 delta-P' complex with peptide Pep1
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2017-04-25
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 5vli: Computationally designed inhibitor peptide HB1.6928.2.3 in complex with influenza hemagglutinin (A/PuertoRico/8/1934)
Classification: VIRAL PROTEIN/DE NOVO PROTEIN
Source organism: Influenza A virus (strain A/Puerto Rico/8/1934 H1N1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2017-04-25
Authors: Bernard, S.M., Wilson, I.A.
PDB entry 5vlj: Cryo-EM structure of yeast cytoplasmic dynein with Walker B mutation at AAA3 in presence of ATP-VO4
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 10.5 Å
Deposited: 2017-04-25
Authors: Cianfrocco, M.A., DeSantis, M.E., Htet, Z.M., Tran, P.T., Reck-Peterson, S.L., Leschziner, A.E.
PDB entry 5vlk: Short PCSK9 delta-P' complex with shrunken peptide bearing homo-Arginine
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-04-25
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 5vll: Short PCSK9 delta-P' complex with peptide Pep3
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2017-04-25
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 5vlm: Crystal structure of EilR in complex with crystal violet
Classification: TRANSCRIPTION
Source organism: Enterobacter lignolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.403 Å
Deposited: 2017-04-25
Authors: Pereira, J.H., Ruegg, T.L., Chen, J., Novichkov, P., DeGiovani, A., Tomaleri, G.P., Singer, S., Simmons, B., Thelen, M., Adams, P.D.
PDB entry 5vln: NMR structure of the N-domain of troponin C bound to switch region of troponin I
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2017-04-25
Authors: Cai, F., Hwang, P.M., Sykes, B.D.
PDB entry 5vlo: The structure of human CamKII with bound inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2017-04-25
Authors: Somoza, J.R., Villasenor, A.G.
PDB entry 5vlp: PCSK9 complex with LDLR antagonist peptide and Fab7G7
Classification: HYDROLASE
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2017-04-25
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 5vlq: Structure of the TTLL3 Glycylase
Classification: LIGASE
Source organism: Xenopus tropicalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.285 Å
Deposited: 2017-04-25
Authors: Garnham, C.P., Yu, I., Li, Y., Roll-Mecak, A.
PDB entry 5vlr: CRYSTAL STRUCTURE OF PI3K DELTA IN COMPLEX WITH A TRIFLUORO-ETHYL-PYRAZOL-PYROLOTRIAZINE INHIBITOR
Classification: TRANSFERASE/TRANSFERASE REGULATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-04-26
Authors: Sack, J.S.
PDB entry 5vlv: The apo form of the triclocarban-binding single domain camelid nanobody VHH T9
Classification: UNKNOWN FUNCTION
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2017-04-26
Authors: Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K.
PDB entry 5vlx: Dehaloperoxidase B mutant F21W
Classification: heme binding protein
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-04-26
Authors: Carey, L.M., Ghiladi, R.A.
PDB entry 5vly: Asymmetric unit for the coat proteins of phage Qbeta
Classification: VIRUS
Source organism: Escherichia phage Qbeta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2017-04-26
Authors: Cui, Z., Zhang, J.
PDB entry 5vlz: Backbone model for phage Qbeta capsid
Classification: VIRUS
Source organism: Escherichia phage Qbeta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2017-04-26
Authors: Cui, Z., Zhang, J.
PDB entry 5vm0: The hapten triclocarban bound to the single domain camelid nanobody VHH T9
Classification: UNKNOWN FUNCTION
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2017-04-26
Authors: Wogulis, L.A., Wogulis, M.D., Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K.
PDB entry 5vm1: Crystal structure of a xyloylose kinase from Brucella ovis
Classification: TRANSFERASE
Source organism: Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2017-04-26
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vm2: Crystal structure of ECK1772, an oxidoreductase/dehydrogenase of unknown specificity involved in membrane biogenesis from Escherichia coli
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.983 Å
Deposited: 2017-04-26
Authors: Stogios, P.J., Skarina, T., McChesney, C., Di Leo, R., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5vm4: The apo form of the triclocarban-binding single domain camelid nanobody VHH T10
Classification: UNKNOWN FUNCTION
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-04-26
Authors: Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K.
PDB entry 5vm5: Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9, with Ser bound
Classification: LYASE
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2017-04-26
Authors: Buller, A.R., van Roye, P.
PDB entry 5vm6: The hapten triclocarban bound to the single domain camelid nanobody VHH T10
Classification: UNKNOWN FUNCTION
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-04-26
Authors: Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K.
PDB entry 5vm7: Pseudo-atomic model of the MurA-A2 complex
Classification: VIRUS/TRANSFERASE
Source organism: Escherichia coli O139:H28 (strain E24377A / ETEC); Escherichia phage Qbeta
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.7 Å
Deposited: 2017-04-26
Authors: Cui, Z., Zhang, J.
PDB entry 5vm8: Crystal structure of a Ribosomal RNA small subunit methyltransferase E from Neisseria gonorrhoeae bound to S-adenosyl methionine
Classification: TRANSFERASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-04-26
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vm9: Human Argonaute3 bound to guide RNA
Classification: Hydrolase/RNA
Source organism: Homo sapiens; Insect cell expression vector pTIE1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2017-04-26
Authors: Park, M.S., Nakanishi, K.
PDB entry 5vma: Structure of B. pumilus GH48 in complex with a cellobio-derived isofagomine
Classification: HYDROLASE
Source organism: Bacillus pumilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-04-27
Authors: Alahuhta, P.M., Lunin, V.V.
PDB entry 5vmb: Crystal structure of a glycine hydroxymethyltransferase from Acinetobacter baumannii
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-04-27
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vmc: Influenza hemagglutinin H1 mutant DH1 in complex with 6'SLN
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2017-04-27
Authors: Ni, F., Kondrashkina, E., Wang, Q.
PDB entry 5vmd: Crystal structure of UBR-box from UBR6 in a domain-swapping conformation
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.202 Å
Deposited: 2017-04-27
Authors: Munoz-Escobar, J., Kozlov, G., Gehring, K.
PDB entry 5vme: Crystal structure of human IgG1 Fc K248E, T437R mutant
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-04-27
Authors: Armstrong, A.A., Gilliland, G.L.
PDB entry 5vmf: Influenza hemagglutinin H1 mutant DH1D in complex with 6'SLN
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2017-04-27
Authors: Ni, F., Kondrashkina, E., Wang, Q.
PDB entry 5vmg: Influenza hemagglutinin H1 mutant DH1E in complex with 6'SLN
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/New_York/1/18(H1N1)); Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2017-04-27
Authors: Ni, F., Kondrashkina, E., Wang, Q.
PDB entry 5vmj: Influenza hemagglutinin H1 mutant DH1E in complex with 3'SLN
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/New_York/1/18(H1N1)); Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2017-04-27
Authors: Ni, F., Kondrashkina, E., Wang, Q.
PDB entry 5vmk: Crystal structure of a bifunctional GlmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1- phosphate N-acetyltransferase from Acinetobacter baumannii
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2017-04-27
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vml: Crystal Structure of Acetoacetyl-CoA Reductase from Burkholderia Pseudomallei 1710b with bound NADP
Classification: OXIDOREDUCTASE
Source organism: Burkholderia pseudomallei (strain 1710b)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-04-27
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5vmm: Staphylococcus aureus IsdB bound to human hemoglobin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2017-04-27
Authors: Bowden, C.F., Chan, A.C., Murphy, M.E.
PDB entry 5vmn: Crystal structure of grouper iridovirus GIV66
Classification: VIRAL PROTEIN
Source organism: Grouper iridovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2017-04-27
Authors: Banjara, S., Kvansakul, M.
PDB entry 5vmo: Crystal structure of grouper iridovirus GIV66:Bim complex
Classification: VIRAL PROTEIN/apoptosis
Source organism: Grouper iridovirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-04-28
Authors: Banjara, S., Kvansakul, M.