LiteFold/PDB huggingface dataset:
PDB entry 3h06: Crystal structure of the binding domain of the AMPA subunit GluR2 bound to the willardiine antagonist, UBP282
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-04-08
Authors: Ahmed, A.H., Oswald, R.E.
PDB entry 3h07: Crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase from Yersinia pestis CO92
Classification: LYASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-04-08
Authors: Nocek, B., Gu, M., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3h08: Crystal structure of the Ribonuclease H1 from Chlorobium tepidum
Classification: HYDROLASE
Source organism: Chlorobaculum tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-04-08
Authors: Ratcliff, K., Corn, J., Marqusee, S.
PDB entry 3h09: The structure of Haemophilus influenzae IgA1 protease
Classification: HYDROLASE
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-04-08
Authors: Johnson, T.A., Qiu, J., Plaut, A.G., Holyoak, T.
PDB entry 3h0a: Crystal Structure of Peroxisome Proliferator-Activated Receptor Gamma (PPARg) and Retinoic Acid Receptor Alpha (RXRa) in Complex with 9-cis Retinoic Acid, Co-activator Peptide, and a Partial Agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-08
Authors: Wang, Z., Sudom, A., Walker, N.P.
PDB entry 3h0b: Discovery of aminoheterocycles as a novel beta-secretase inhibitor class
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-04-08
Authors: Allison, T.J.
PDB entry 3h0c: Crystal Structure of Human Dipeptidyl Peptidase IV (CD26) in Complex with a Reversed Amide Inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2009-04-09
Authors: Nordhoff, S., Cerezo-Galvez, S., Deppe, H., Hill, O., Lopez-Canet, M., Rummey, C., Thiemann, M., Matassa, V.G., Edwards, P.J., Feurer, A.
PDB entry 3h0d: Crystal structure of CtsR in complex with a 26bp DNA duplex
Classification: TRANSCRIPTION/DNA
Source organism: Bacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-09
Authors: Clausen, T., Fuhrmann, J.
PDB entry 3h0e: 3,4-Dihydropyrimido(1,2-a)indol-10(2H)-ones as Potent Non-Peptidic Inhibitors of Caspase-3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.997 Å
Deposited: 2009-04-09
Authors: Xu, W.
PDB entry 3h0f: Crystal structure of the human Fyn SH3 R96W mutant
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2009-04-09
Authors: Ponchon, L., Hoh, F., Labesse, G., Dumas, C., Arold, S.T.
PDB entry 3h0g: RNA Polymerase II from Schizosaccharomyces pombe
Classification: TRANSCRIPTION
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 3.65 Å
Deposited: 2009-04-09
Authors: Spahr, H., Calero, G., Bushnell, D.A., Kornberg, R.D.
PDB entry 3h0h: human Fyn SH3 domain R96I mutant, crystal form I
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2009-04-09
Authors: Dumas, C., Strub, M.-P., Arold, S.T.
PDB entry 3h0i: human Fyn SH3 domain R96I mutant, crystal form II
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-09
Authors: Dumas, C., Strub, M.-P., Arold, S.T.
PDB entry 3h0j: Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with compound 2
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-04-09
Authors: Zhang, H., Tong, L.
PDB entry 3h0k: Crystal structure of an adenylated kinase related protein from sulfolobus solfataricus to 3.25a
Classification: structural genomics, unknown function
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2009-04-09
Authors: Stein, A.J., Sather, A., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3h0l: Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus
Classification: LIGASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-09
Authors: Wu, J., Bu, W., Sheppard, K., Kitabatake, M., Soll, D., Smith, J.L.
PDB entry 3h0m: Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus
Classification: LIGASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-04-09
Authors: Wu, J., Bu, W., Sheppard, K., Kitabatake, M., Soll, D., Smith, J.L.
PDB entry 3h0n: Crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 A resolution
Classification: METAL BINDING PROTEIN
Source organism: Jannaschia sp. CCS1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2009-04-09
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3h0o: The importance of CH-Pi stacking interactions between carbohydrate and aromatic residues in truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase
Classification: HYDROLASE
Source organism: Fibrobacter succinogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-04-09
Authors: Tsai, L.C., Hsiao, C.H.
PDB entry 3h0p: 2.0 Angstrom Crystal Structure of an Acyl Carrier Protein S-malonyltransferase from Salmonella typhimurium.
Classification: TRANSFERASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-10
Authors: Minasov, G., Wawrzak, Z., Skarina, T., Onopriyenko, O., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3h0q: Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with compound 3
Classification: LIGASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-10
Authors: Zhang, H., Tong, L.
PDB entry 3h0r: Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus
Classification: LIGASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-04-10
Authors: Wu, J., Bu, W., Sheppard, K., Kitabatake, M., Soll, D., Smith, J.L.
PDB entry 3h0s: Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with compound 7
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2009-04-10
Authors: Vajdos, F.
PDB entry 3h0t: Hepcidin-Fab complex
Classification: IMMUNE SYSTEM/Antimicrobial Protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2009-04-10
Authors: Syed, R., Li, V.
PDB entry 3h0u: Crystal structure of a putative enoyl-CoA hydratase from Streptomyces avermitilis
Classification: LYASE
Source organism: Streptomyces avermitilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-04-10
Authors: Bonanno, J.B., Freeman, J., Bain, K.T., Miller, S., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3h0v: Human AdoMetDC with 5'-Deoxy-5'-(dimethylsulfonio) adenosine
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2009-04-10
Authors: Bale, S., Brooks, W.H., Hanes, J.W., Mahesan, A.M., Guida, W.C., Ealick, S.E.
PDB entry 3h0w: Human AdoMetDC with 5'-Deoxy-5'-[(N-dimethyl)amino]-8-methyl-adenosine
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2009-04-10
Authors: Bale, S., Brooks, W.H., Hanes, J.W., Mahesan, A.M., Guida, W.C., Ealick, S.E.
PDB entry 3h0x: Crystal structure of peptide-binding domain of Kar2 protein from Saccharomyces cerevisiae
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2009-04-10
Authors: Osipiuk, J., Bigelow, L., Gu, M., Sahi, C., Craig, E.A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3h0y: Aurora A in complex with a bisanilinopyrimidine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-10
Authors: Wiesmann, C., Ultsch, M.H., Cochran, A.G.
PDB entry 3h0z: Aurora A in complex with a bisanilinopyrimidine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2009-04-10
Authors: Wiesmann, C., Ultsch, M.H., Cochran, A.G.
PDB entry 3h10: Aurora A inhibitor complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-10
Authors: Wiesmann, C., Ultsch, M.H., Cochran, A.G.
PDB entry 3h11: Zymogen caspase-8:c-FLIPL protease domain complex
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-10
Authors: Jeffrey, P.D., Yu, J.W., Shi, Y.
PDB entry 3h12: Crystal structure of putative mandelate racemase from Bordetella Bronchiseptica RB50
Classification: ISOMERASE
Source organism: Bordetella bronchiseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-04-10
Authors: Malashkevich, V.N., Toro, R., Morano, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3h13: c-FLIPL protease-like domain
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-10
Authors: Jeffrey, P.D., Yu, J.W., Shi, Y.
PDB entry 3h14: Crystal structure of a putative aminotransferase from Silicibacter pomeroyi
Classification: TRANSFERASE
Source organism: Silicibacter pomeroyi DSS-3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-10
Authors: Sampathkumar, P., Atwell, S., Wasserman, S., Miller, S., Bain, K., Rutter, M., Tarun, G., Sauder, J.M., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3h15: Crystal structure of replication initiation factor MCM10-ID bound to ssDNA
Classification: REPLICATION/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2009-04-10
Authors: Warren, E.M., Eichman, B.F.
PDB entry 3h16: Crystal structure of a bacteria TIR domain, PdTIR from Paracoccus denitrificans
Classification: SIGNALING PROTEIN
Source organism: Paracoccus denitrificans PD1222
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-11
Authors: Chan, S.L., Low, L.Y., Santelli, E., Pascual, J.
PDB entry 3h17: Crystal structure of EstE5-PMSF (I)
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-11
Authors: Hwang, K.Y., Nam, K.H.
PDB entry 3h18: Crystal structure of EstE5-PMSF (II)
Classification: HYDROLASE
Source organism: Uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-11
Authors: Hwang, K.Y., Nam, K.H.
PDB entry 3h19: Crystal structure of EstE5, was soaked by methyl alcohol
Classification: HYDROLASE
Source organism: Uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-11
Authors: Hwang, K.Y., Nam, K.H.
PDB entry 3h1a: Crystal structure of EstE5, was soaked by ethyl alcohol
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-11
Authors: Hwang, K.Y., Nam, K.H.
PDB entry 3h1b: Crystal structure of EstE5, was soaked by isopropyl alcohol
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-11
Authors: Hwang, K.Y., Nam, K.H.
PDB entry 3h1c: Crystal structure of Polynucleotide Phosphorylase (PNPase) core bound to RNase E and Tungstate
Classification: TRANSFERASE
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.57 Å
Deposited: 2009-04-11
Authors: Nurmohamed, S.
PDB entry 3h1d: Structure of the HUWE1 HECT Domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2009-04-11
Authors: Partridge, J.R., Schwartz, T.U.
PDB entry 3h1e: Crystal structure of Mg(2+) and BeH(3)(-)-bound CheY of Helicobacter pylori
Classification: SIGNALING PROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-12
Authors: Lam, K.H., Ling, T.K., Au, S.W.
PDB entry 3h1f: Crystal structure of CheY mutant D53A of Helicobacter pylori
Classification: SIGNALING PROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-12
Authors: Lam, K.H., Ling, T.K., Au, S.W.
PDB entry 3h1g: Crystal structure of Chey mutant T84A of helicobacter pylori
Classification: SIGNALING PROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-04-12
Authors: Lam, K.H., Ling, T.K., Au, S.W.
PDB entry 3h1h: Cytochrome bc1 complex from chicken
Classification: OXIDOREDUCTASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2009-04-12
Authors: Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.I., Kim, K.K., Hung, L.W., Crofts, A.R., Berry, E.A., Kim, S.H.
PDB entry 3h1i: Stigmatellin and antimycin bound cytochrome bc1 complex from chicken
Classification: OXIDOREDUCTASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.53 Å
Deposited: 2009-04-12
Authors: Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.I., Kim, K.K., Hung, L.W., Crofts, A.R., Berry, E.A., Kim, S.H.
PDB entry 3h1j: Stigmatellin-bound cytochrome bc1 complex from chicken
Classification: OXIDOREDUCTASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-04-12
Authors: Zhang, Z., Huang, L., Shulmeister, V.M., Chi, Y.-I., Kim, K.K., Hung, L.-W., Crofts, A.R., Berry, E.A., Kim, S.-H.
PDB entry 3h1k: Chicken cytochrome BC1 complex with ZN++ and an iodinated derivative of kresoxim-methyl bound
Classification: OXIDOREDUCTASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.48 Å
Deposited: 2009-04-12
Authors: Berry, E.A., Zhang, Z., Bellamy, H.D., Huang, L.S.
PDB entry 3h1l: Chicken cytochrome BC1 complex with ascochlorin bound at QO and QI sites
Classification: OXIDOREDUCTASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2009-04-12
Authors: Berry, E.A., Huang, L.S., Minagawa, N.
PDB entry 3h1m: Crystal structure of mannose 6-phosphate isomerase (holo; zinc bound)
Classification: ISOMERASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-13
Authors: Sagurthi, S.R., Giri, G., Savithri, H.S., Murthy, M.R.N.
PDB entry 3h1n: Crystal structure of probable glutathione S-transferase from Bordetella bronchiseptica RB50
Classification: TRANSFERASE
Source organism: Bordetella bronchiseptica RB50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2009-04-13
Authors: Tan, K., Xu, X., Cui, H., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3h1o: The Structure of Fluorescent Protein FP480
Classification: FLUORESCENT PROTEIN
Source organism: Entacmaea Quadricolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-13
Authors: Pletnev, S., Morozova, K.S., Verkhusha, V.V., Dauter, Z.
PDB entry 3h1p: Mature Caspase-7 I213A with DEVD-CHO inhibitor bound to active site
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2009-04-13
Authors: Witkowski, W.A., Hardy, J.A.
PDB entry 3h1q: Crystal structure of ethanolamine utilization protein EutJ from Carboxydothermus hydrogenoformans
Classification: STRUCTURAL PROTEIN
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-04-13
Authors: Chang, C., Tesar, C., Jedrzejczak, R., Kinney, J., Kerfeld, C., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3h1r: Order-disorder structure of fluorescent protein FP480
Classification: FLUORESCENT PROTEIN
Source organism: Entacmaea Quadricolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2009-04-13
Authors: Pletnev, S., Morozova, K.S., Verkhusha, V.V., Dauter, Z.
PDB entry 3h1s: Crystal structure of superoxide dismutase from Francisella tularensis subsp. tularensis SCHU S4
Classification: OXIDOREDUCTASE
Source organism: Francisella tularensis subsp. tularensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-13
Authors: Nocek, B., Zhou, M., Papazisi, L., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3h1t: The fragment structure of a putative HsdR subunit of a type I restriction enzyme from Vibrio vulnificus YJ016
Classification: HYDROLASE
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-13
Authors: Park, S.Y., Lee, H.J., Kim, J.S.
PDB entry 3h1u: Structure of ubiquitin in complex with Cd ions
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-04-14
Authors: Qureshi, I.A., Ferron, F., Cheung, P., Lescar, J.
PDB entry 3h1v: Human glucokinase in complex with a synthetic activator
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2009-04-14
Authors: Kamata, K., Takahashi, K.
PDB entry 3h1w: Crystal structure of mannose 6-phosphate isomerase bound with zinc and yttrium
Classification: ISOMERASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2009-04-14
Authors: Sagurthi, S.R., Giri, G., Savithri, H.S., Murthy, M.R.N.
PDB entry 3h1x: Simultaneous inhibition of anti-coagulation and inflammation: Crystal structure of phospholipase A2 complexed with indomethacin at 1.4 A resolution reveals the presence of the new common ligand binding site
Classification: HYDROLASE
Source organism: Daboia russellii russellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-04-14
Authors: Singh, N., Prem Kumar, R., Sharma, S., Kaur, P., Singh, T.P.
PDB entry 3h1y: Crystal structure of mannose 6-phosphate isomerase from Salmonella typhimurium bound to substrate (f6p)and metal atom (zn)
Classification: ISOMERASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2009-04-14
Authors: Sagurthi, S.R., Giri, G., Savithri, H.S., Murthy, M.R.N.
PDB entry 3h1z: Molecular basis for the association of PIPKIgamma -p90 with the clathrin adaptor AP-2
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2009-04-14
Authors: Vahedi-Faridi, A., Kahlfeldt, N., Schaefer, J.G., Krainer, G., Keller, S., Saenger, W., Krauss, M., Haucke, V.
PDB entry 3h20: Crystal structure of primase RepB'
Classification: REPLICATION
Source organism: Plasmid RSF1010
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2009-04-14
Authors: Geibel, S., Banchenko, S., Engel, M., Lanka, E., Saenger, W.
PDB entry 3h21: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h22: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h23: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h24: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h25: Crystal structure of the catalytic domain of primase Repb' in complex with initiator DNA
Classification: REPLICATION/DNA
Source organism: Plasmid RSF1010; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-04-14
Authors: Geibel, S., Banchenko, S., Engel, M., Lanka, E., Saenger, W.
PDB entry 3h26: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h2a: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h2b: Crystal structure of the SAM-dependent methyltransferase cg3271 from Corynebacterium glutamicum in complex with S-adenosyl-L-homocysteine and pyrophosphate. Northeast Structural Genomics Consortium Target CgR113A
Classification: TRANSFERASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-14
Authors: Forouhar, F., Lew, S., Seetharaman, J., Sahdev, S., Xiao, R., Foote, E.L., Ciccosanti, C., Wang, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3h2c: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h2d: Crystal structure of a chemotactic chec-like protein (so_3915) from shewanella oneidensis mr-1 at 1.86 A resolution
Classification: SIGNALING PROTEIN
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2009-04-14
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3h2e: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h2f: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h2g: Crystal structure of a rice cell wall degrading esterase LipA from Xanthomonas oryzae
Classification: HYDROLASE
Source organism: Xanthomonas oryzae pv. oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2009-04-14
Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R.
PDB entry 3h2h: Crystal structure of G231F mutant of the rice cell wall degrading esterase LipA from Xanthomonas oryzae
Classification: HYDROLASE
Source organism: Xanthomonas oryzae pv. oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-14
Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R.
PDB entry 3h2i: Crystal structure of N228W mutant of the rice cell wall degrading esterase LipA from Xanthomonas oryzae
Classification: HYDROLASE
Source organism: Xanthomonas oryzae pv. oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-14
Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R.
PDB entry 3h2j: Crystal structure of the rice cell wall degrading esterase LipA from Xanthomonas oryzae
Classification: HYDROLASE
Source organism: Xanthomonas oryzae pv. oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2009-04-14
Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R.
PDB entry 3h2k: Crystal structure of a ligand-bound form of the rice cell wall degrading esterase LipA from Xanthomonas oryzae
Classification: HYDROLASE
Source organism: Xanthomonas oryzae pv. oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-14
Authors: Aparna, G., Chatterjee, A., Sonti, R.V., Sankaranarayanan, R.
PDB entry 3h2l: Crystal structure of HCV NS5B polymerase in complex with a novel bicyclic dihydro-pyridinone inhibitor
Classification: TRANSFERASE
Source organism: Hepatitis C virus (isolate BK)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-14
Authors: Han, Q., Showalter, R.E., Zhou, Q., Kissinger, C.R.
PDB entry 3h2m: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h2n: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h2o: Structural Studies of Pterin-Based Inhibitors of Dihydropteroate Synthase
Classification: Transferase/Transferase Inhibitor
Source organism: Bacillus anthracis str. A2012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-04-14
Authors: Yun, M.-K., White, S.W.
PDB entry 3h2p: Human SOD1 D124V Variant
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-04-14
Authors: Seetharaman, S.V., Winkler, D.D., Taylor, A.B., Cao, X., Whitson, L.J., Doucette, P.A., Valentine, J.S., Carroll, M.C., Culotta, V.C., Hart, P.J.
PDB entry 3h2q: Human SOD1 H80R variant, P21 crystal form
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-04-14
Authors: Seetharaman, S.V., Winkler, D.D., Taylor, A.B., Cao, X., Whitson, L.J., Doucette, P.A., Valentine, J.S., Carroll, M.C., Culotta, V.C., Hart, P.J.
PDB entry 3h2s: Crystal Structure of the Q03B84 Protein from Lactobacillus casei. Northeast Structural Genomics Consortium Target LcR19.
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus casei ATCC 334
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2009-04-14
Authors: Vorobiev, S., Lew, S., Seetharaman, J., Wang, D., Ciccosanti, C., Sahdev, S., Acton, T.B., Xiao, R., Everett, J., Nair, R., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3h2t: Crystal structure of gene product 6, baseplate protein of bacteriophage T4
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-04-14
Authors: Aksyuk, A.A., Leiman, P.G., Shneider, M.M., Mesyanzhinov, V.V., Rossmann, M.G.
PDB entry 3h2u: Human raver1 RRM1, RRM2, and RRM3 domains in complex with human vinculin tail domain Vt
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2009-04-14
Authors: Lee, J.H., Rangarajan, E.S., Yogesha, S.D., Izard, T.
PDB entry 3h2v: Human raver1 RRM1 domain in complex with human vinculin tail domain Vt
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-04-14
Authors: Lee, J.H., Rangarajan, E.S., Yogesha, S.D., Izard, T.
PDB entry 3h2w: Structure of A. acidocaldarius cellulase CelA in complex with cellobiose
Classification: HYDROLASE
Source organism: Alicyclobacillus acidocaldarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2009-04-14
Authors: Morera, S., Vigouroux, A.
PDB entry 3h2x: Crystal Structure of The Human Lymphoid Tyrosine Phosphatase Catalytic Domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-14
Authors: Tsai, S.J., Sen, U.
PDB entry 3h2y: Crystal structure of YqeH GTPase from Bacillus anthracis with dGDP bound
Classification: HYDROLASE
Source organism: Bacillus anthracis str.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-04-15
Authors: Brunzelle, J.S., Anderson, S.M., Xu, X., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3h2z: The crystal structure of mannitol-1-phosphate dehydrogenase from Shigella flexneri
Classification: OXIDOREDUCTASE
Source organism: Shigella flexneri 2a str. 2457T
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-15
Authors: Wu, R., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3h30: Crystal structure of the catalytic subunit of human protein kinase CK2 with 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2009-04-15
Authors: Niefind, K., Raaf, J., Issinger, O.-G.
PDB entry 3h31: Structure of Rhodothermus marinus HiPIP at 1.0 A resolution
Classification: ELECTRON TRANSPORT
Source organism: Rhodothermus marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2009-04-15
Authors: Stelter, M., Melo, A.M.P., Saraiva, L., Teixeira, M., Archer, M.
PDB entry 3h32: Crystal structure of D-dimer from human fibrin complexed with Gly-His-Arg-Pro-Tyr-amide
Classification: BLOOD CLOTTING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2009-04-15
Authors: Doolittle, R.F., Pandi, L.
PDB entry 3h33: PpcC, A cytochrome c7 from Geobacter sulfurreducens
Classification: ELECTRON TRANSPORT
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-04-15
Authors: Pokkuluri, P.R., Schiffer, M.
PDB entry 3h34: PpcE, A cytochrome c7 from Geobacter sulfurreducens
Classification: ELECTRON TRANSPORT
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-04-15
Authors: Pokkuluri, P.R., Schiffer, M.
PDB entry 3h35: Structure of the uncharacterized protein ABO_0056 from the hydrocarbon-degrading marine bacterium Alcanivorax borkumensis SK2.
Classification: structural genomics, unknown function
Source organism: Alcanivorax borkumensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-04-15
Authors: Cuff, M.E., Evdokimova, E., Kagan, O., Edwards, A., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3h36: Structure of an uncharacterized domain in polyribonucleotide nucleotidyltransferase from Streptococcus mutans UA159
Classification: TRANSFERASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-04-15
Authors: Cuff, M.E., Hatzos, C., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3h37: The structure of CCA-adding enzyme apo form I
Classification: TRANSFERASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2009-04-16
Authors: Toh, Y., Tomita, K.
PDB entry 3h38: The structure of CCA-adding enzyme apo form II
Classification: TRANSFERASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2009-04-16
Authors: Toh, Y., Tomita, K.
PDB entry 3h39: The complex structure of CCA-adding enzyme with ATP
Classification: TRANSFERASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.854 Å
Deposited: 2009-04-16
Authors: Toh, Y., Tomita, K.
PDB entry 3h3a: The complex structure of CCA-adding enzyme with CTP
Classification: TRANSFERASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.801 Å
Deposited: 2009-04-16
Authors: Toh, Y., Tomita, K.
PDB entry 3h3b: Crystal structure of the single-chain Fv (scFv) fragment of an anti-ErbB2 antibody chA21 in complex with residues 1-192 of ErbB2 extracellular domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2009-04-16
Authors: Zhou, H., Liu, Y., Niu, L., Zhu, J., Teng, M.
PDB entry 3h3c: Crystal structure of PYK2 in complex with Sulfoximine-substituted trifluoromethylpyrimidine analog
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-16
Authors: Han, S., Mistry, A.
PDB entry 3h3d: Drosophila Pumilio RNA binding domain (Puf domain)
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-16
Authors: Edwards, T.A., Aggarwal, A.K., Wharton, R.P.
PDB entry 3h3e: Crystal structure of Tm1679, A METAL-DEPENDENT HYDROLASE OF THE BETA-LACTAMASE SUPERFAMILY
Classification: structural genomics, METAL BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.749 Å
Deposited: 2009-04-16
Authors: Cooper, D.R., Olekhnovitch, N., Derewenda, U., Derewenda, Z.S., Integrated Center for Structure and Function Innovation (ISFI)
PDB entry 3h3f: Rabbit muscle L-lactate dehydrogenase in complex with NADH and oxamate
Classification: OXIDOREDUCTASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2009-04-16
Authors: Bujacz, A., Bujacz, G., Swiderek, K., Paneth, P.
PDB entry 3h3g: Crystal structure of the extracellular domain of the human parathyroid hormone receptor (PTH1R) in complex with parathyroid hormone-related protein (PTHrP)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2009-04-16
Authors: Pioszak, A.A., Xu, H.E.
PDB entry 3h3h: Crystal structure of a snoal-like protein of unknown function (bth_ii0226) from burkholderia thailandensis e264 at 1.60 A resolution
Classification: UNKNOWN FUNCTION
Source organism: Burkholderia thailandensis E264
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-04-16
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3h3i: CRYSTAL STRUCTURE OF A PUTATIVE LIPID BINDING PROTEIN (BT_2261) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.20 A RESOLUTION
Classification: LIPID BINDING PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-16
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3h3j: Crystal structure of lactate dehydrogenase mutant (A85R) from staphylococcus aureus complexed with NAD and pyruvate
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus subsp. aureus COL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-04-16
Authors: Ho, M.-C., Almo, S.C., Schramm, V.L.
PDB entry 3h3k: Structure of A. acidocaldarius cellulase CelA in complex with cellotetraose
Classification: HYDROLASE
Source organism: Alicyclobacillus acidocaldarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-16
Authors: Morera, S., Eckert, K.
PDB entry 3h3l: Crystal structure of PUTATIVE SUGAR HYDROLASE (YP_001304206.1) from Parabacteroides distasonis ATCC 8503 at 1.59 A resolution
Classification: HYDROLASE
Source organism: Parabacteroides distasonis ATCC 8503
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2009-04-16
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3h3m: Crystal structure of flagellar protein FliT from Bordetella bronchiseptica
Classification: STRUCTURAL GENOMICS
Source organism: Bordetella bronchiseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-16
Authors: Shumilin, I.A., Wang, S., Chruszcz, M., Xu, X., Le, B., Cui, H., Savchenko, A., Edwards, A.M., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3h3n: Glycerol Kinase H232R with Glycerol
Classification: TRANSFERASE
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2009-04-16
Authors: Yeh, J.I., Kettering, R.D.
PDB entry 3h3o: Glycerol Kinase H232R with Ethylene Glycol
Classification: TRANSFERASE
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-16
Authors: Yeh, J.I., Kettering, R.D.
PDB entry 3h3p: Crystal structure of HIV epitope-scaffold 4E10 Fv complex
Classification: IMMUNE SYSTEM
Source organism: artificial gene; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-04-16
Authors: Holmes, M.A.
PDB entry 3h3q: Crystal structure of the CERT START domain in complex with HPA-13
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-04-17
Authors: Kudo, N., Wakatsuki, S., Kato, R.
PDB entry 3h3r: Crystal structure of the CERT START domain in complex with HPA-14
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-04-17
Authors: Kudo, N., Wakatsuki, S., Kato, R.
PDB entry 3h3s: Crystal structure of the CERT START domain in complex with HPA-15
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2009-04-17
Authors: Kudo, N., Wakatsuki, S., Kato, R.
PDB entry 3h3t: Crystal structure of the CERT START domain in complex with HPA-16
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-04-17
Authors: Kudo, N., Wakatsuki, S., Kato, R.
PDB entry 3h3u: Crystal structure of CRP (cAMP receptor Protein) from Mycobacterium tuberculosis
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-04-17
Authors: Kumar, P., Joshi, D.C., Akif, M., Akhter, Y., Hasnain, S.E., Mande, S.C.
PDB entry 3h3v: Yeast RNAP II containing poly(A)-signal sequence in the active site
Classification: TRANSFERASE/DNA/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2009-04-17
Authors: Dengl, S., Cramer, P.
PDB entry 3h3w: Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 dome-shaped baseplate
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 12 Å
Deposited: 2009-04-17
Authors: Aksyuk, A.A., Leiman, P.G., Shneider, M.M., Mesyanzhinov, V.V., Rossmann, M.G.
PDB entry 3h3x: Structure of the V74M large subunit mutant of NI-FE hydrogenase in an oxidized state
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio fructosovorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-04-17
Authors: Volbeda, A., Martinez, N., Martin, L., Fontecilla-Camps, J.C.
PDB entry 3h3y: Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 star-shaped baseplate
Classification: VIRAL PROTEIN
Source organism: bacteriophage T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 16 Å
Deposited: 2009-04-17
Authors: Aksyuk, A.A., Leiman, P.G., Shneider, M.M., Mesyanzhinov, V.V., Rossmann, M.G.
PDB entry 3h3z: Crystal structure of a putative cyclic nucleotide binding protein (spoa0323) from ruegeria pomeroyi dss-3 at 2.35 A resolution
Classification: cNMP-BINDING PROTEIN
Source organism: Ruegeria pomeroyi DSS-3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-04-17
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3h40: Binary complex of human DNA polymerase iota with template U/T
Classification: REPLICATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-17
Authors: Jain, R., Nair, D.T., Johnson, R.E., Prakash, L., Prakash, S., Aggarwal, A.K.
PDB entry 3h41: CRYSTAL STRUCTURE OF A NLPC/P60 FAMILY PROTEIN (BCE_2878) FROM BACILLUS CEREUS ATCC 10987 AT 1.79 A RESOLUTION
Classification: HYDROLASE
Source organism: Bacillus cereus ATCC 10987
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2009-04-17
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3h42: Crystal structure of PCSK9 in complex with Fab from LDLR competitive antibody
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-17
Authors: Piper, D.E., Walker, N.P.C., Romanow, W.G., Thibault, S.T., Tsai, M.M., Yang, E.
PDB entry 3h43: N-terminal domain of the proteasome-activating nucleotidase of Methanocaldococcus jannaschii
Classification: HYDROLASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-17
Authors: Jeffrey, P.D., Zhang, F., Hu, M., Tian, G., Zhang, P., Finley, D., Shi, Y.
PDB entry 3h44: Crystal Structure of Insulin Degrading Enzyme in Complex with macrophage inflammatory protein 1 alpha
Classification: Hydrolase/Cytokine
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-04-17
Authors: Ren, M., Guo, Q., Tang, W.J.
PDB entry 3h45: Glycerol Kinase H232E with Ethylene Glycol
Classification: TRANSFERASE
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2009-04-17
Authors: Yeh, J.I., Kettering, R.D.
PDB entry 3h46: Glycerol Kinase H232E with Glycerol
Classification: TRANSFERASE
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-04-17
Authors: Yeh, J.I., Kettering, R.D.
PDB entry 3h47: X-ray Structure of Hexameric HIV-1 CA
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-04-18
Authors: Pornillos, O.
PDB entry 3h49: Crystal structure of a putative Ribokinase (Apo Form) from E.coli at 1.8A resolution
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-04-18
Authors: Satyanarayana, L., Eswaramoorthy, S., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3h4b: Ternary complex of human DNA polymerase iota with template U/T and incoming dATP
Classification: REPLICATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2009-04-18
Authors: Jain, R., Nair, D.T., Johnson, R.E., Prakash, L., Prakash, S., Aggarwal, A.K.
PDB entry 3h4c: Structure of the C-terminal Domain of Transcription Factor IIB from Trypanosoma brucei
Classification: TRANSCRIPTION
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-04-18
Authors: Syed Ibrahim, B., Kanneganti, N., Rieckhof, G.E., Das, A., Laurents, D.V., Palenchar, J.B., Bellofatto, V., Wah, D.A.
PDB entry 3h4d: Ternary complex of human DNA polymerase iota with template U/T and incoming dGTP
Classification: REPLICATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-04-18
Authors: Jain, R., Nair, D.T., Johnson, R.E., Prakash, L., Prakash, S., Aggarwal, A.K.
PDB entry 3h4e: X-ray Structure of Hexameric HIV-1 CA
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.704 Å
Deposited: 2009-04-19
Authors: Pornillos, O.
PDB entry 3h4f: Met62Leu variant of nitrite reductase from Alcaligenes faeclis
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-04-19
Authors: MacPherson, I.S., Rosell, F.I., Scofield, M., Mauk, A.G., Murphy, M.E.P.
PDB entry 3h4g: Structure of aldehyde reductase holoenzyme in complex with potent aldose reductase inhibitor Fidarestat: Implications for inhibitor binding and selectivity
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-04-20
Authors: Carbone, V., El-Kabbani, O.
PDB entry 3h4h: Met94Thr/Phe312Cys variant of nitrite reductase from Alcaligenes faecalis
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-04-20
Authors: MacPherson, I.S., Murphy, I.S.
PDB entry 3h4i: Chimeric Glycosyltransferase for the generation of novel natural products
Classification: TRANSFERASE
Source organism: Actinoplanes teichomyceticus; Amycolatopsis orientalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-04-20
Authors: Dias, M.V.B., Truman, A.W., Wu, S., Blundell, T.L., Huang, F., Spencer, J.B.
PDB entry 3h4j: crystal structure of pombe AMPK KDAID fragment
Classification: TRANSFERASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-04-20
Authors: Chen, L., Jiao, Z.-H., Zheng, L.-S., Zhang, Y.-Y., Xie, S.-T., Wang, Z.-X., Wu, J.-W.
PDB entry 3h4k: Crystal structure of the wild type Thioredoxin glutatione reductase from Schistosoma mansoni in complex with auranofin
Classification: OXIDOREDUCTASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2009-04-20
Authors: Angelucci, F., Dimastrogiovanni, D., Miele, A.E., Boumis, G., Brunori, M., Bellelli, A.
PDB entry 3h4l: Crystal Structure of N terminal domain of a DNA repair protein
Classification: DNA BINDING PROTEIN, PROTEIN BINDING
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-04-20
Authors: Arana, M.E., Holmes, S.F., Fortune, J.M., Moon, A.F., Pedersen, L.C., Kunkel, T.A.
PDB entry 3h4m: AAA ATPase domain of the proteasome- activating nucleotidase
Classification: HYDROLASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.106 Å
Deposited: 2009-04-20
Authors: Jeffrey, P., Zhang, F., Hu, M., Tian, G., Zhang, P., Finley, D., Shi, Y.