LiteFold/PDB huggingface dataset:
PDB entry 9fgd: Cryo-EM structure of the full-length alpha1beta3gamma2 GABA(A) receptor in SMALPs without PIP2 and in complex with Mb38
Classification: MEMBRANE PROTEIN
Source organism: Helicobacter pylori G27; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-23
Authors: Mihaylov, D.B., Malinauskas, T., Aricescu, A.R.
PDB entry 9fge: Vanillyl alcohol oxidase from Novosphingobium sp: T181D mutant in complex with vanillin
Classification: FLAVOPROTEIN
Source organism: Novosphingobium sp. 01WB02.4-10
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-05-23
Authors: Guerriere, T.B., Mattevi, A.
PDB entry 9fgf: Cryo-EM structure of the full-length alpha1beta3gamma2 GABA(A) receptor in Saposin A nanodisc in the long-lived symmetric resting state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-23
Authors: Mihaylov, D.B., Malinauskas, T., Aricescu, A.R.
PDB entry 9fgg: Cryo-EM structure of the full-length alpha1beta3gamma2 GABA(A) receptor in Saposin A nanodisc bound to GABA and Etomidate in the long-lived symmetric desensitised state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-05-23
Authors: Mihaylov, D.B., Malinauskas, T., Aricescu, A.R.
PDB entry 9fgh: Cryo-EM structure of the full-length alpha1beta3gamma2 GABA(A) receptor in large MSP2N2 nanodisc in complex with GABA in the long-lived symmetric desensitised state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-23
Authors: Mihaylov, D.B., Malinauskas, T., Aricescu, A.R.
PDB entry 9fgi: LSSmOrange (P1) - Directionality of Optical Properties of Fluorescent Proteins
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-05-24
Authors: Myskova, J., Brynda, J., Lazar, J.
PDB entry 9fgj: Cryo-EM structure of Legionella effector SdeC (PDE-mART domain)
Classification: TOXIN
Source organism: Legionella pneumophila str. Lens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-05-24
Authors: Weng, T.-H., Misra, M., Chen, W., Safarian, S., Kudryashev, M., Dikic, I.
PDB entry 9fgm: Cryo-EM structure of Legionella effector SdeC (3D flexible refinement)
Classification: TOXIN
Source organism: Legionella pneumophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-05-24
Authors: Weng, T.-H., Misra, M., Chen, W., Safarian, S., Kudryashev, M., Dikic, I.
PDB entry 9fgn: Coxsackievirus A9 bound with compound 18 (CL304)
Classification: VIRUS
Source organism: Coxsackievirus A9
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-05-24
Authors: Plavec, Z., Butcher, S.J., Mitchell, C., Buckner, C.
PDB entry 9fgo: Crystal structure of Enterovirus 71 2A protease mutant C110A containing VP1-2A junction in the active site
Classification: VIRAL PROTEIN
Source organism: Enterovirus A71
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2024-05-24
Authors: Ni, X., Koekemoer, L., Williams, E.P., Wang, S., Wright, N.D., Godoy, A.S., Aschenbrenner, J.C., Balcomb, B.H., Lithgo, R.M., Marples, P.G., Fairhead, M., Thompson, W., Kirkegaard, K., Fearon, D., Walsh, M.A., von Delft, F.
PDB entry 9fgp: cilia and flagella associated protein 299
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2024-05-24
Authors: Wright, N.D., Koekemoer, L., Structural Genomics Consortium (SGC)
PDB entry 9fgq: Structure of human APC3loop 375-381 bound to the NCP
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-24
Authors: Young, R.V.C., Muhammad, R., Alfieri, C.
PDB entry 9fgr: SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv76-77 (focused refinement)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-05-25
Authors: Berlinguer, M., Chaves-Sanjuan, A., Milazzo, F.M., Minenkova, O., De Santis, R., Bolognesi, M.
PDB entry 9fgs: SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv41N (focused refinement)
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-05-25
Authors: Berlinguer, M., Chaves-Sanjuan, A., Milazzo, F.M., Minenkova, O., De Santis, R., Bolognesi, M.
PDB entry 9fgt: SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein in complex with the single chain fragment scFv76 (focused refinement)
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-05-25
Authors: Berlinguer, M., Chaves-Sanjuan, A., Milazzo, F.M., Minenkova, O., De Santis, R., Bolognesi, M.
PDB entry 9fgu: SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein in complex with the single chain fragment scFv76-77 (focused refinement)
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-05-25
Authors: Berlinguer, M., Chaves-Sanjuan, A., Milazzo, F.M., Minenkova, O., De Santis, R., Bolognesi, M.
PDB entry 9fgv: Cryo-EM structure of MBP homo-dimer assembled by homo Di-Gluebody
Classification: PROTEIN BINDING
Source organism: Escherichia coli; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2024-05-26
Authors: Yi, G., Ye, M., Mamalis, D., Carrique, L., Fairhead, M., Li, H., Duerr, K., Zhang, P., Sauer, D.B., von Delft, F., Davis, B.G., Gilbert, R.J.C.
PDB entry 9fgx: Cryo-EM structure of Lysozyme homo-dimer assembled by homo Di-Gluebody
Classification: PROTEIN BINDING
Source organism: Gallus gallus; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2024-05-26
Authors: Yi, G., Ye, M., Mamalis, D., Carrique, L., Fairhead, M., Li, H., Duerr, K., Zhang, P., Sauer, D.B., von Delft, F., Davis, B.G., Gilbert, R.J.C.
PDB entry 9fgy: Cryo-EM structure of Lysozyme homo-dimer assembled by homo Di-Gluebody - Local refinement
Classification: PROTEIN BINDING
Source organism: Gallus gallus; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2024-05-26
Authors: Yi, G., Ye, M., Mamalis, D., Carrique, L., Fairhead, M., Li, H., Duerr, K., Zhang, P., Sauer, D.B., von Delft, F., Davis, B.G., Gilbert, R.J.C.
PDB entry 9fgz: Pex5-Eci1 complex - Eci1 reconstruction
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-05-26
Authors: Elad, N., Dym, O.
PDB entry 9fh0: Pex5-Eci1 complex - Pex5 local refinement
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-26
Authors: Elad, N., Dym, O.
PDB entry 9fh1: Cryo-EM Structure of Amyloid-beta Fibrils from Mouse Brain Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Classification: PROTEIN FIBRIL
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-05-26
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Pagnon de la Vega, M., Roeder, C., Heidler, T.V., Syvaenen, S., Willbold, D., Sehlin, D., Ingelsson, M., Schroeder, G.F.
PDB entry 9fh2: Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 1
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-05-26
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Pagnon de la Vega, M., Roeder, C., Heidler, T.V., Syvaenen, S., Willbold, D., Sehlin, D., Ingelsson, M., Schroeder, G.F.
PDB entry 9fh3: Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 2
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-05-26
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Pagnon de la Vega, M., Roeder, C., Heidler, T.V., Syvaenen, S., Willbold, D., Sehlin, D., Ingelsson, M., Schroeder, G.F.
PDB entry 9fh4: Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 3
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-05-26
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Pagnon de la Vega, M., Roeder, C., Heidler, T.V., Syvaenen, S., Willbold, D., Sehlin, D., Ingelsson, M., Schroeder, G.F.
PDB entry 9fh5: Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 4
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-05-26
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Pagnon de la Vega, M., Roeder, C., Heidler, T.V., Syvaenen, S., Willbold, D., Sehlin, D., Ingelsson, M., Schroeder, G.F.
PDB entry 9fh6: Cryo-EM Structure of Tau Filaments from Individuals Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-26
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Pagnon de la Vega, M., Roeder, C., Heidler, T.V., Syvaenen, S., Willbold, D., Sehlin, D., Ingelsson, M., Schroeder, G.F.
PDB entry 9fh7: OYE2 from Saccharomyces cerevisiae
Classification: FLAVOPROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.529 Å
Deposited: 2024-05-26
Authors: Opperman, D.J., Paul, C.E.
PDB entry 9fh8: Crystal structure of the SPD-2 domain of Apis dorsata CEP192
Classification: CELL CYCLE
Source organism: Apis dorsata
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2024-05-26
Authors: van Breugel, M.
PDB entry 9fh9: Structure of CyclinB1 N-terminus bound to the NCP
Classification: CELL CYCLE
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-27
Authors: Young, R.V.C., Muhammad, R., Alfieri, C.
PDB entry 9fha: Human transthyretin (TTR) in complex with (E)-2-((((2-(trifluoromethyl)benzyl)oxy)imino)methyl)benzoic acid
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-27
Authors: Ciccone, L., Shepard, W., Sirigu, S., Camodeca, C., Mazzoccchi, F., Fruchart, C., Nencetti, S., Orlandini, E.
PDB entry 9fhb: Cryo-EM structure of human CD163 SRCR2-4 in complex with haptoglobin-hemoglobin
Classification: ENDOCYTOSIS
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2024-05-27
Authors: Andersen, C.B.F., Kollman, J.M.
PDB entry 9fhc: Crystallographic structure of AcrB V612F with bound minocycline
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-05-27
Authors: Lazarova, M., Diederichs, K., Pos, K.M.
PDB entry 9fhd: hKHK-C in fomplex with BI-9787
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.845 Å
Deposited: 2024-05-27
Authors: Ebenhoch, R., Pautsch, A.
PDB entry 9fhe: hKHK-C in complex with BI-9787 (pH 5.5)
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.313 Å
Deposited: 2024-05-27
Authors: Ebenhoch, R., Pautsch, A.
PDB entry 9fhf: Crystal structure of human Glucose-6-phosphate isomerase with dihydroxyacetone phosphate ligand
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-27
Authors: Jonatansdottir, Y.Y., Hjorleifsson, G.J.
PDB entry 9fhg: Crystallographic structure of AcrB V612N in LTO state
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-05-27
Authors: Lazarova, M., Pos, K.M.
PDB entry 9fhj: Crystallographic structure of AcrB V612N in TTT state
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2024-05-27
Authors: Lazarova, M., Pos, K.M.
PDB entry 9fhk: Structure of the F13 protein of Vaccinia virus (P21 crystal form)
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-27
Authors: Vernuccio, R., Guardado-Calvo, P.
PDB entry 9fhl: High-resolution cryo-EM structure of Saccharolobus solfataricus 30S ribosomal subunit bound to mRNA and initiator tRNA
Classification: TRANSLATION
Source organism: Saccharolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-27
Authors: Bourgeois, G., Coureux, P.D., Mechulam, Y., Schmitt, E.
PDB entry 9fhn: Crystal structure of the arginine kinase Der p 20.0101
Classification: ALLERGEN
Source organism: Dermatophagoides pteronyssinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-05-28
Authors: Schooltink, L., Sagmeister, T., Todorovic, N., Hofer, G., Keller, W.
PDB entry 9fho: Crystal structure of the arginine kinase Der p 20_like (putative isoform)
Classification: ALLERGEN
Source organism: Dermatophagoides pteronyssinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-28
Authors: Schooltink, L., Sagmeister, T., Todorovic, N., Hofer, G., Keller, W.
PDB entry 9fhp: CryoEM structure of wild-type Turnip Yellows Virus
Classification: VIRUS
Source organism: Turnip yellows virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.08 Å
Deposited: 2024-05-28
Authors: Trapani, S., Lai Kee Him, J., Hoh, F., Brault, V., Bron, P.
PDB entry 9fhq: Crystal structure of SARS-CoV-2 Mpro in complex with RHTCR04
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.696 Å
Deposited: 2024-05-28
Authors: El kilani, H., Hilgenfeld, R.
PDB entry 9fhs: Structure of the F13 protein of Vaccinia virus (F432 crystal form)
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2024-05-28
Authors: Vernuccio, R., Guardado-Calvo, P.
PDB entry 9fht: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) wild type in complex hexaguluronic acid at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fhu: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) wild type in complex hexamannuluronic acid at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fhv: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) wild type in complex pentasaccharide (ManGul)3 at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fhw: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) wild type in complex tetraguluronic acid at pH 8
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fhx: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) wild type in complex tetramannuronic acid at pH 8
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fhy: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) wild type in complex with an unsaturated mannuronic acid tetramer at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fhz: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) wild type in complex unsaturated guluronic acid tetramer at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fi0: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) mutant D108N
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fi1: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) mutant H297N at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fi2: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) mutant N242A at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fi3: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) mutant Q173N in complex with tetraguluronic acid at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fi4: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) mutant Q173N at pH 8
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fi5: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) mutant Y298F in complex tetramannuronic acid at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fi6: Bacteroides ovatus polysaccharide lyase family 38 (BoPL38) mutant Y91F+Y298F in complex with tetramannuronic acid at pH 3.5
Classification: LYASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2024-05-28
Authors: Tandrup, T., Wilkens, C.
PDB entry 9fi8: SSU(head) structure derived from the SSU sample of the mitoribosome from T. gondii.
Classification: RIBOSOME
Source organism: Toxoplasma gondii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-28
Authors: Rocha, R.E.O., Barua, S., Boissier, F., Nguyen, T.T., Hashem, Y.
PDB entry 9fi9: Human PIF + Z48847594 (OCCUPANCY 0.7)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.727 Å
Deposited: 2024-05-28
Authors: Bax, B.D., Sanders, C.M., Antson, A.A., Brandao-Neto, J.
PDB entry 9fia: SSU(body) structure derived from the SSU sample of the mitoribosome from T. gondii.
Classification: RIBOSOME
Source organism: Toxoplasma gondii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-05-28
Authors: Rocha, R.E.O., Barua, S., Boissier, F., Nguyen, T.T., Hashem, Y.
PDB entry 9fib: Structure of 30S-IF1-IF3-mRNA-GE81112A complex
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-05-29
Authors: Safdari, H.A., Morici, M., Wilson, D.N.
PDB entry 9fic: High-resolution X-ray structure of human PC1/3 (PCSK1) prodomain R77A,R80A,R81A triple-mutant
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-05-29
Authors: Dahms, S.O., Brandstetter, H.
PDB entry 9fid: X-ray structure of furin (PCSK3) in complex with the PC1/3 (PCSK1) prodomain mutant R78K,R80A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-05-29
Authors: Dahms, S.O., Brandstetter, H.
PDB entry 9fie: X-ray structure of furin (PCSK3) in complex with the PC1/3 (PCSK1) prodomain mutant R77A,R80A,R81A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-29
Authors: Dahms, S.O., Brandstetter, H.
PDB entry 9fif: Crystal Structure of NuoEF variant P228R(NuoF) from Aquifex aeolicus bound to NADH under anoxic conditions
Classification: ELECTRON TRANSPORT
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-05-29
Authors: Wohlwend, D., Friedrich, T., Goeppert-Asadollahpour, S.
PDB entry 9fig: Crystal structure of the arginine kinase Sar s 20
Classification: ALLERGEN
Source organism: Sarcoptes scabiei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-05-29
Authors: Schooltink, L., Sagmeister, T., Todorovic, N., Hofer, G., Keller, W.
PDB entry 9fih: Crystal Structure of NuoEF variant P228R(NuoF) from Aquifex aeolicus bound to NADH under anoxic conditions after 10 min soaking
Classification: ELECTRON TRANSPORT
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-05-29
Authors: Wohlwend, D., Friedrich, T., Goeppert-Asadollahpour, S.
PDB entry 9fii: Crystal Structure of oxidized NuoEF variant E222K(NuoF) from Aquifex aeolicus
Classification: ELECTRON TRANSPORT
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-29
Authors: Wohlwend, D., Friedrich, T., Goeppert-Asadollahpour, S.
PDB entry 9fij: Crystal Structure of reduced NuoEF variant E222K(NuoF) from Aquifex aeolicus
Classification: ELECTRON TRANSPORT
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-05-29
Authors: Wohlwend, D., Friedrich, T., Goeppert-Asadollahpour, S.
PDB entry 9fik: Structure of the FAB fragment of the Antibody NTF30037 in complex with NTF3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-05-29
Authors: Gallego, P., Aagaard, A., Sjogren, T., Chin, S., Neal, F.
PDB entry 9fil: Crystal Structure of reduced NuoEF variant E222K(NuoF) from Aquifex aeolicus bound to NAD+
Classification: ELECTRON TRANSPORT
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-05-29
Authors: Wohlwend, D., Friedrich, T., Goeppert-Asadollahpour, S.
PDB entry 9fim: compound 1 bound KMT9 crystal structure
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-05-29
Authors: Sheng, W., Eric, M., Roland, S.
PDB entry 9fio: Structure-guided discovery of selective USP7 inhibitors with in vivo activity
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-05-29
Authors: Baker, L.M., Murray, J., Hubbard, R.E., Whitehead, N.
PDB entry 9fip: Structure-guided discovery of selective USP7 inhibitors with in vivo activity
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2024-05-29
Authors: Baker, L.M., Murray, J., Hubbard, R.E., Whitehead, N.
PDB entry 9fiq: Structure-guided discovery of selective USP7 inhibitors with in vivo activity
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2024-05-29
Authors: Baker, L.M., Murray, J., Hubbard, R.E., Whitehead, N.
PDB entry 9fir: Structure-guided discovery of selective USP7 inhibitors with in vivo activity
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2024-05-29
Authors: Baker, L.M., Murray, J., Hubbard, R.E., Whitehead, N.
PDB entry 9fis: Structure-guided discovery of selective USP7 inhibitors with in vivo activity
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2024-05-29
Authors: Baker, L.M., Murray, J., Hubbard, R.E., Whitehead, N.
PDB entry 9fit: Structure-guided discovery of selective USP7 inhibitors with in vivo activity
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-05-29
Authors: Baker, L.M., Murray, J., Hubbard, R.E., Whitehead, N.
PDB entry 9fiu: Structure-guided discovery of selective USP7 inhibitors with in vivo activity
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.37 Å
Deposited: 2024-05-29
Authors: Baker, L.M., Murray, J., Hubbard, R.E., Whitehead, N.
PDB entry 9fiv: Structure-guided discovery of selective USP7 inhibitors with in vivo activity
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-05-29
Authors: Baker, L.M., Murray, J., Hubbard, R.E., Whitehead, N.
PDB entry 9fiw: MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH LRP6 INTERNALIZATION PEPTIDE SYRHFA
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2024-05-29
Authors: Renko, M., Gammons, M.V., Bienz, M.
PDB entry 9fix: MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH LRP6 INTERNALIZATION PEPTIDE SYRPYSYRHFA
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2024-05-29
Authors: Renko, M., Gammons, M.V., Bienz, M.
PDB entry 9fiy: MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH LRP6 INTERNALIZATION PEPTIDE SYRHFA
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2024-05-29
Authors: Renko, M., Gammons, M.V., Bienz, M.
PDB entry 9fiz: Structure of the F13 protein (mutant A295E) of Vaccinia virus
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-05-30
Authors: Vernuccio, R., Guardado-Calvo, P.
PDB entry 9fj0: Structure of the F13 protein (mutant G277C) of Vaccinia virus
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2024-05-30
Authors: Vernuccio, R., Guardado-Calvo, P.
PDB entry 9fj1: Structure of the F13 protein of Vaccinia virus in complex with IMCBH
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2024-05-30
Authors: Vernuccio, R., Guardado-Calvo, P.
PDB entry 9fj2: Rubrerythrin from Clostridium difficile P28
Classification: OXIDOREDUCTASE
Source organism: Clostridioides difficile P28
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-05-30
Authors: Salgueiro, B.A., Matias, P.M., Romao, C.V.
PDB entry 9fj3: Structure of ubiquitin bound of coiled-coil UIM form 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-05-30
Authors: Paredes Vergara, P., Huang, D.T.
PDB entry 9fj4: Structure of ubiquitin bound to coiled coil-UIM form 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-05-30
Authors: Paredes Vergara, P., Huang, D.T.
PDB entry 9fj7: Nuclease NucB from Bacillus licheniformis mutant N117Q
Classification: DNA BINDING PROTEIN
Source organism: Bacillus licheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-05-30
Authors: Koval, T., Stransky, J., Oestergaard, L.H., Dohnalek, J.
PDB entry 9fj8: Teth514_1788 1,2-beta-oligomannan phosphorylase in complex with mannotetraose
Classification: CYTOSOLIC PROTEIN
Source organism: Thermoanaerobacter sp. X514
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-30
Authors: Cioci, G., Durand, J., Potocki-Veronese, G., Ladeveze, S.
PDB entry 9fja: Structure of the F13 protein (A295E mutant) of Vaccinia virus in complex with tecovirimat
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2024-05-30
Authors: Vernuccio, R., Guardado-Calvo, P.
PDB entry 9fjc: Compact CVB1-VLP (Tween80)
Classification: VIRUS LIKE PARTICLE
Source organism: Coxsackievirus B1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.15 Å
Deposited: 2024-05-30
Authors: Plavec, Z., Butcher, S.J.
PDB entry 9fjd: Expanded CVB1-VLP (Tween80)
Classification: VIRUS LIKE PARTICLE
Source organism: Coxsackievirus B1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.15 Å
Deposited: 2024-05-31
Authors: Plavec, Z., Butcher, S.J.
PDB entry 9fje: Expanded formalin inactivated CVB1
Classification: VIRUS
Source organism: Coxsackievirus B1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2024-05-31
Authors: Plavec, Z., Butcher, S.J.
PDB entry 9fjf: Lysosomal transporting complex of beta-glucocerebrosidase (GCase) and lysosomal integral membrane protein 2 (LIMP-2) with bound Pro-macrobodies (Combined focus map)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-05-31
Authors: Dobert, J.P., Schaefer, J.H.S., Dal Maso, T., Socher, E., Versees, W., Moeller, A., Zunke, F., Arnold, P.
PDB entry 9fjg: Two PLK1 PBD proteins bound to CENP-U(58-114) phosphorylated at Thr98
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-31
Authors: Ren, L., Gasper, R., Vetter, I.R., Musacchio, A.
PDB entry 9fjh: Two PLK1 PBD proteins bound to CENP-U(58-114) phosphorylated at Thr78 and Thr98
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-05-31
Authors: Ren, L., Gasper, R., Vetter, I.R., Musacchio, A.
PDB entry 9fji: Two PLK1 PBD proteins bound to CENP-U(58-114) phosphorylated at Thr98
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-31
Authors: Ren, L., Gasper, R., Vetter, I.R., Musacchio, A.
PDB entry 9fjj: Two PLK1 PBD proteins bound to CENP-U(39-114) phosphorylated at Thr78 and Thr98
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-31
Authors: Ren, L., Gasper, R., Vetter, I.R., Musacchio, A.
PDB entry 9fjk: Omicron BA.1 Spike protein with neutralizing NTD specific mAb K501SP6
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-05-31
Authors: Bjoernsson, K.H., Walker, M.R., Raghavan, S.S.R., Ward, A.B., Barfod, L.K.
PDB entry 9fjl: Sulfolobus acidocaldarius NusA2 structure
Classification: UNKNOWN FUNCTION
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-05-31
Authors: Pilotto, S., Phung, D.K., Pinotsis, N.
PDB entry 9fjm: Cryo-EM structure of the phalloidin-bound pointed end of the actin filament.
Classification: STRUCTURAL PROTEIN
Source organism: Amanita phalloides; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-05-31
Authors: Boiero Sanders, M., Oosterheert, W., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9fjn: Solution NMR structure of a peptide encompassing residues 2-19 of the human formin INF2
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-05-31
Authors: Jimenez, M.A., Comas, L., Labat-de-Hoz, L., Correas, I., Alonso, M.A.
PDB entry 9fjo: Structure of the undecorated pointed end of F-actin
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-05-31
Authors: Boiero Sanders, M., Oosterheert, W., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9fjp: Cryo-EM structure of Mycobacterium tuberculosis sigma-B RNA polymerase bound to -10 promoter element ssDNA oligo
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-05-31
Authors: Brodolin, K., Marechal, N.
PDB entry 9fjq: Structure of human carbonic anhydrase II complexed with 4-benzyl-5,7,8-trifluoro-3,4-dihydro-2H-benzo[b][1,4]thiazine-6-sulfonamide 1,1-dioxide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2024-05-31
Authors: Manakova, E.N., Grazulis, S., Paketuryte, V., Smirnov, A., Vaskevicius, A., Trumpickaite, G.
PDB entry 9fjr: Cryo-EM structure of Mycobacterium tuberculosis sigma-B RNA polymerase bound to -10 promoter element ssDNA oligo - sigma-B docked conformation
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2024-05-31
Authors: Brodolin, K., Blaise, M.
PDB entry 9fjs: Cryo-EM structure of Mycobacterium tuberculosis sigma-B RNA polymerase bound to -10 promoter element ssDNA oligo - sigma-B undocked conformation
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2024-05-31
Authors: Brodolin, K., Blaise, M.
PDB entry 9fjt: Human Monoamine Oxidase B in complex with MC4762 inhibitor (9a) at 1.4 A resolution
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-05-31
Authors: Gottinger, A., Binda, C.
PDB entry 9fju: Structure of the DNase I- and phalloidin-bound pointed end of F-actin (conformer 1)
Classification: STRUCTURAL PROTEIN
Source organism: Amanita phalloides; Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2024-05-31
Authors: Boiero Sanders, M., Oosterheert, W., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9fjv: Structure of human carbonic anhydrase II complexed with 4-(cyclooctylmethyl)-5,7,8-trifluoro-3,4-dihydro-2H-benzo[b][1,4]thiazine-6- sulfonamide 1,1-dioxide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-05-31
Authors: Manakova, E.N., Grazulis, S., Paketuryte, V., Smirnov, A., Vaskevicius, A., Trumpickaite, G.
PDB entry 9fjw: Solution NMR structure of a peptide encompassing residues 2-36 of the human formin INF2
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-05-31
Authors: Jimenez, M.A., Comas, L., Labat-de-Hoz, L., Correas, I., Alonso, M.A.
PDB entry 9fjx: Crystal structure of human CRBN-DDB1 in complex with Lenalidomide
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-31
Authors: Le Bihan, Y.-V., van Montfort, R.L.M.
PDB entry 9fjy: Structure of the DNase I- and phalloidin-bound pointed end of F-actin (conformer 2).
Classification: STRUCTURAL PROTEIN
Source organism: Amanita phalloides; Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2024-05-31
Authors: Boiero Sanders, M., Oosterheert, W., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9fjz: Teth514_1788 1,2-beta-oligomannan phosphorylase in complex with mannoheptaose
Classification: CYTOSOLIC PROTEIN
Source organism: Thermoanaerobacter sp. X514
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-31
Authors: Cioci, G., Ladeveze, S., Durand, J., Potocki-Veronese, G.
PDB entry 9fk0: LGTV with TBEV prME
Classification: VIRUS
Source organism: Langat virus (strain TP21); tick-borne encephalitis virus-European subtype
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2024-06-01
Authors: Bisikalo, K., Rosendal, E.
PDB entry 9fk1: The structure of glycosynthase XT6 (E265G mutant), the extracellular xylanase of G.proteiniphilus T-6
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-06-01
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fk2: The structure of glycosynthase XT6 (E265G mutant), the extracellular xylanase of G.proteiniphilus T-6 in complex with two xylobiose-F molecules
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-06-01
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fk3: The structure of glycosynthase XT6 (E265G mutant), the extracellular xylanase of G.proteiniphilus T-6 in complex with xylobiose-F and xylotetraose-F molecules
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-06-01
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fk4: The structure of glycosynthase XT6 (E265G mutant), the extracellular xylanase of G.proteiniphilus T-6 in complex with xylohexaose-F molecule
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-06-01
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fk5: Zebrafish Betaglycan Orphan Domain (zfBGo) in complex with TGF-B3 and extracellular domains of TGFBRI and TGFBRII
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-06-02
Authors: Wieteska, L., Coleman, J.A., Hinck, A.P.
PDB entry 9fk6: The structure of XT6 from G.proteiniphilus T-6: The E265G/N158D mutant
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-06-02
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fk7: The structure of XT6 from G.proteiniphilus T-6: The E265G/N158E mutant
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-06-02
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fk8: The structure of XT6 from G.proteiniphilus T-6: The E265G/N158T mutant
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-06-02
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fk9: The structure of XT6 from G.proteiniphilus T-6: The E265G/Q238A/W241A mutant
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-06-02
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fka: Cryo-EM structure of the reduced cytochrome bd oxidase from M. tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-06-03
Authors: Kayastha, K., Bruenle, S.
PDB entry 9fkb: Tail of emppty Haloferax tailed virus 1
Classification: VIRUS
Source organism: Haloferax tailed virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-06-03
Authors: Zhang, D., Daum, B., Isupov, M.N., McLaren, M.
PDB entry 9fkc: Crystal structure of human Glucose-6-phosphate isomerase with citraconate ligand
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-06-03
Authors: Jonatansdottir, Y.Y., Hjorleifsson, G.J.
PDB entry 9fkd: Progesterone-bound DB3 Fab in complex with computationally designed DBPro1156_2 protein binder
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-06-03
Authors: Pacesa, M., Marchand, A., Correia, B.E.
PDB entry 9fke: SAH bound KMT9 crystal structure
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-06-03
Authors: Sheng, W., Eric, M., Roland, S.
PDB entry 9fkf: Crystal structure of human Glucose-6-phosphate isomerase with phosphoenol pyruvate ligand
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-06-03
Authors: Jonatansdottir, Y.Y., Hjorleifsson, G.J.
PDB entry 9fkg: compound 2a bound KMT9 structure
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.592 Å
Deposited: 2024-06-03
Authors: Sheng, W., Eric, M., Roland, S.
PDB entry 9fkh: The structure of glycosynthase IXT6 (E241G mutant), the intracellular xylanase of G.proteiniphilus T-6
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-06-03
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fki: The structure of glycosynthase IXT6 (E241G mutant), the intracellular xylanase of G.proteiniphilus T-6 in complex with xylobiose-F molecule
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-06-03
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fkj: The structure of glycosynthase IXT6 (E241G mutant), the intracellular xylanase of G.proteiniphilus T-6 in complex with two xylobiose-F molecules
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-06-03
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fkk: The structure of glycosynthase IXT6 (E241G mutant), the intracellular xylanase of G.proteiniphilus T-6 in complex with xylobiose-F and xylotetraose-F molecules
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-06-03
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fkl: The structure of glycosynthase IXT6 (E241G mutant), the intracellular xylanase of G.proteiniphilus T-6 in complex with xylobiose-F and xylohexaose-F molecules
Classification: HYDROLASE
Source organism: Geobacillus proteiniphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-06-03
Authors: Hadad, N., Chmelnik, O., Dessau, M., Shoham, Y., Shoham, G.
PDB entry 9fkm: compound 2b bound KMT9 crystal structure
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.502 Å
Deposited: 2024-06-03
Authors: Sheng, W., Eric, M., Roland, S.
PDB entry 9fkn: Human monocarboxylate transporter 8 bound to thyroxine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-06-03
Authors: Coscia, F., Tassinari, M.
PDB entry 9fko: Arm segment of bacteriophage phi812
Classification: VIRUS
Source organism: Escherichia coli; Staphylococcus phage 812
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-06-03
Authors: Siborova, M., Baska, R., Binovsky, J., Plevka, P.
PDB entry 9fkp: Zebrafish Betaglycan Orphan Domain (zfBGo) in complex with TGF-b1 and extracellular domain of TGFBRII
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2024-06-03
Authors: Wieteska, L., Coleman, J.A., Hinck, A.P.
PDB entry 9fkq: Cryo-EM structure of MBP homo-dimer assembled by homo Di-Gluebody - MBP local refinement
Classification: PROTEIN BINDING
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-06-03
Authors: Yi, G., Ye, M., Mamalis, D., Carrique, L., Fairhead, M., Li, H., Duerr, K., Zhang, P., Sauer, D.B., von Delft, F., Davis, B.G., Gilbert, R.J.C.
PDB entry 9fkr: KAT6A IN COMPLEX WITH SMALL MOLECULE INHIBITOR BAY-184
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2024-06-04
Authors: Hillig, R.C., Puetter, V.
PDB entry 9fks: Respiratory supercomplex CIII2-CIV2 from alphaproteobacterium
Classification: ELECTRON TRANSPORT
Source organism: Paracoccus denitrificans PD1222
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.31 Å
Deposited: 2024-06-04
Authors: Yaikhomba, M., Hirst, J., Croll, T.I., Spikes, T.E., Agip, A.N.A.
PDB entry 9fku: Crystal Structure of AimR from Katmira phage
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-06-04
Authors: Gallego del Sol, F., Marina, A.
PDB entry 9fkv: compound 2c bound KMT9 crystal structure
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-06-04
Authors: Sheng, W., Eric, M., Roland, S.
PDB entry 9fkw: compound 3a bound KMT9 crystal structure
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.392 Å
Deposited: 2024-06-04
Authors: Sheng, W., Eric, M., Roland, S.
PDB entry 9fkx: Crystal structure of IL-17A in complex with compound 18
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.048 Å
Deposited: 2024-06-04
Authors: Rondeau, J.M., Lehmann, S., Scheufler, C.
PDB entry 9fky: Discovery of a Series of Covalent, Cell Active Bfl-1 Inhibitors
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.557 Å
Deposited: 2024-06-04
Authors: Hargreaves, D.
PDB entry 9fkz: Discovery of a Series of Covalent, Cell Active Bfl-1 Inhibitors
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.684 Å
Deposited: 2024-06-04
Authors: Hargreaves, D.
PDB entry 9fl0: Discovery of a Series of Covalent, Cell Active Bfl-1 Inhibitors
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-06-04
Authors: Hargreaves, D.
PDB entry 9fl1: Apo Glyceraldehyde 3-phosphate Dehydrogenase (GapA) from Helicobacter pylori
Classification: OXIDOREDUCTASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2024-06-04
Authors: Elliott, P.R., Moody, P.C.E.
PDB entry 9fl2: Crystal structure of Oscillatoria princeps pyranose oxidase
Classification: OXIDOREDUCTASE
Source organism: Oscillatoria princeps RMCB-10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2024-06-04
Authors: Rozeboom, H.J., Fraaije, M.W.