LiteFold/PDB huggingface dataset:
PDB entry 1y9t: Crystal structure of a type III secretion system protein complexed with the lipid, 1-monohexanoyl-2-hydroxy-sn-glycero-3-phosphate
Classification: LIPID BINDING PROTEIN
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2004-12-16
Authors: Lario, P.I., Strynadka, N.C.
PDB entry 1y9u: Bordetella ferric binding protein
Classification: METAL BINDING PROTEIN
Source organism: Bordetella pertussis Tohama I
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2004-12-16
Authors: Tom-Yew, S.A.L., Cui, D.T., Bekker, E.G., Murphy, M.E.P.
PDB entry 1y9w: Structural Genomics, 1.9A crystal structure of an acetyltransferase from Bacillus cereus ATCC 14579
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-16
Authors: Zhang, R., Li, H., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y9x: Solution structure of Archaeon DNA-binding protein ssh10b
Classification: DNA BINDING PROTEIN
Source organism: Sulfolobus shibatae
Experimental method: SOLUTION NMR
Deposited: 2004-12-16
Authors: Cui, Q., Tong, Y., Wang, J.
PDB entry 1y9z: Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution
Classification: HYDROLASE
Source organism: Pseudoalteromonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2004-12-16
Authors: Dong, D., Watanabe, K.
PDB entry 1ya0: Crystal structure of the N-terminal domain of human SMG7
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2004-12-17
Authors: Fukuhara, N., Ebert, J., Unterholzner, L., Lindner, D., Izaurralde, E., Conti, E.
PDB entry 1ya3: Crystal structure of the human mineralocorticoid receptor ligand-binding domain bound to progesterone and harboring the S810L mutation responsible for a severe form of hypertension
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2004-12-17
Authors: Fagart, J., Huyet, J., Pinon, G.M., Rochel, M., Mayer, C., Rafestin-Oblin, M.E.
PDB entry 1ya4: Crystal Structure of Human Liver Carboxylesterase 1 in complex with tamoxifen
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2004-12-17
Authors: Fleming, C.D., Bencharit, S., Edwards, C.C., Hyatt, J.L., Morton, C.L., Howard-Williams, E.L., Potter, P.M., Redinbo, M.R.
PDB entry 1ya5: Crystal structure of the titin domains z1z2 in complex with telethonin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.445 Å
Deposited: 2004-12-17
Authors: Pinotsis, N., Popov, A., Zou, P., Wilmanns, M.
PDB entry 1ya6: alpha-glucosyltransferase in complex with UDP and a 13-mer DNA containing a central A:G mismatch
Classification: TRANSFERASE/DNA
Source organism: Enterobacteria phage T4; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-17
Authors: Lariviere, L., Sommer, N., Morera, S.
PDB entry 1ya7: Implications for interactions of proteasome with PAN and PA700 from the 1.9 A structure of a proteasome-11S activator complex
Classification: HYDROLASE/HYDROLASE ACTIVATOR
Source organism: Thermoplasma acidophilum; Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-17
Authors: Forster, A., Masters, E.I., Whitby, F.G., Robinson, H., Hill, C.P.
PDB entry 1ya8: Crystal Structure of Human Liver Carboxylesterase in complex with cleavage products of Mevastatin
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2004-12-17
Authors: Fleming, C.D., Bencharit, S., Edwards, C.C., Hyatt, J.L., Morton, C.L., Howard-Williams, E.L., Potter, P.M., Redinbo, M.R.
PDB entry 1ya9: Crystal Structure of the 22kDa N-Terminal Fragment of Mouse Apolipoprotein E
Classification: LIPID TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2004-12-17
Authors: Peters-Libeu, C.A., Rutenber, E., Newhouse, Y., Hatters, D.M., Weisgraber, K.H.
PDB entry 1yaa: ASPARTATE AMINOTRANSFERASE FROM SACCHAROMYCES CEREVISIAE CYTOPLASM
Classification: AMINOTRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 1998-01-27
Authors: Jeffery, C.J.
PDB entry 1yab: Structure of T. maritima FliN flagellar rotor protein
Classification: STRUCTURAL PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2004-12-17
Authors: Hill, C.P., Blair, D.F., Brown, P.N., Mathews, M.A.A., Joss, L.A.
PDB entry 1yac: THE 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE YCAC GENE PRODUCT FROM ESCHERICHIA COLI REVEALS AN OCTAMERIC HYDROLASE OF UNKNOWN SPECIFICITY
Classification: UNKNOWN BACTERIAL HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1998-07-29
Authors: Colovos, C., Cascio, D., Yeates, T.O.
PDB entry 1yad: Structure of TenI from Bacillus subtilis
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-12-17
Authors: Toms, A.V., Haas, A.L., Park, J.-H., Begley, T.P., Ealick, S.E.
PDB entry 1yae: Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2004-12-17
Authors: Nanao, M.H., Green, T., Stern-Bach, Y., Heinemann, S.F., Choe, S.
PDB entry 1yaf: Structure of TenA from Bacillus subtilis
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-12-17
Authors: Toms, A.V., Haas, A.L., Park, J.-H., Begley, T.P., Ealick, S.E.
PDB entry 1yag: STRUCTURE OF THE YEAST ACTIN-HUMAN GELSOLIN SEGMENT 1 COMPLEX
Classification: CONTRACTILE PROTEIN
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1998-10-09
Authors: Vorobiev, S., Strokopytov, B., Frieden, C., Almo, S.C.
PDB entry 1yah: Crystal Structure of Human Liver Carboxylesterase complexed to Etyl Acetate; A Fatty Acid Ethyl Ester Analogue
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2004-12-17
Authors: Fleming, C.D., Bencahrit, S., Edwards, C.C., Hyatt, J.L., Morton, C.L., Howard-Williams, E.L., Potter, P.M., Redinbo, M.R.
PDB entry 1yai: X-RAY STRUCTURE OF A BACTERIAL COPPER,ZINC SUPEROXIDE DISMUTASE
Classification: OXIDOREDUCTASE
Source organism: Photobacterium leiognathi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1996-02-03
Authors: Bourne, Y., Redford, S.M., Lo, T.P., Tainer, J.A., Getzoff, E.D.
PDB entry 1yaj: Crystal Structure of Human Liver Carboxylesterase in complex with benzil
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2004-12-17
Authors: Fleming, C.D., Bencharit, S., Edwards, C.C., Hyatt, J.L., Morton, C.M., Howard-Williams, E.L., Potter, P.M., Redinbo, M.R.
PDB entry 1yak: Complex of Bacillus subtilis TenA with 4-amino-2-methyl-5-hydroxymethylpyrimidine
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-17
Authors: Toms, A.V., Haas, A.L., Park, J.-H., Begley, T.P., Ealick, S.E.
PDB entry 1yal: CARICA PAPAYA CHYMOPAPAIN AT 1.7 ANGSTROMS RESOLUTION
Classification: HYDROLASE
Source organism: Carica papaya
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 1996-06-20
Authors: Maes, D., Bouckaert, J., Poortmans, F., Wyns, L., Looze, Y.
PDB entry 1yam: CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: CALORIMETRIC STUDIES AND X-RAY STRUCTURAL ANALYSIS OF THE FIVE ISOLEUCINE TO VALINE MUTANTS
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1995-09-29
Authors: Yamagata, Y., Kaneda, H., Fujii, S., Takano, K., Ogasahara, K., Kanaya, E., Kikuchi, M., Oobatake, M., Yutani, K.
PDB entry 1yan: CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: CALORIMETRIC STUDIES AND X-RAY STRUCTURAL ANALYSIS OF THE FIVE ISOLEUCINE TO VALINE MUTANTS
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1995-09-29
Authors: Yamagata, Y., Kaneda, H., Fujii, S., Takano, K., Ogasahara, K., Kanaya, E., Kikuchi, M., Oobatake, M., Yutani, K.
PDB entry 1yao: CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: CALORIMETRIC STUDIES AND X-RAY STRUCTURAL ANALYSIS OF THE FIVE ISOLEUCINE TO VALINE MUTANTS
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1995-09-29
Authors: Yamagata, Y., Kaneda, H., Fujii, S., Takano, K., Ogasahara, K., Kanaya, E., Kikuchi, M., Oobatake, M., Yutani, K.
PDB entry 1yap: CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: CALORIMETRIC STUDIES AND X-RAY STRUCTURAL ANALYSIS OF THE FIVE ISOLEUCINE TO VALINE MUTANTS
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1995-09-29
Authors: Yamagata, Y., Kaneda, H., Fujii, S., Takano, K., Ogasahara, K., Kanaya, E., Kikuchi, M., Oobatake, M., Yutani, K.
PDB entry 1yaq: CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: CALORIMETRIC STUDIES AND X-RAY STRUCTURAL ANALYSIS OF THE FIVE ISOLEUCINE TO VALINE MUTANTS
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1995-09-29
Authors: Yamagata, Y., Kaneda, H., Fujii, S., Takano, K., Ogasahara, K., Kanaya, E., Kikuchi, M., Oobatake, M., Yutani, K.
PDB entry 1yar: Structure of Archeabacterial 20S proteasome mutant D9S- PA26 complex
Classification: HYDROLASE/HYDROLASE ACTIVATOR
Source organism: Thermoplasma acidophilum; Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-17
Authors: Forster, A., Masters, E.I., Whitby, F.G., Robinson, H., Hill, C.P.
PDB entry 1yas: HYDROXYNITRILE LYASE COMPLEXED WITH HISTIDINE
Classification: COMPLEX (LYASE/PEPTIDE)
Source organism: Hevea brasiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1996-05-15
Authors: Wagner, U.G., Kratky, C.
PDB entry 1yat: IMPROVED CALCINEURIN INHIBITION BY YEAST FKBP12-DRUG COMPLEXES. CRYSTALLOGRAPHIC AND FUNCTIONAL ANALYSIS
Classification: BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1993-01-06
Authors: Rotonda, J., Becker, J.W.
PDB entry 1yau: Structure of Archeabacterial 20S proteasome- PA26 complex
Classification: HYDROLASE/HYDROLASE ACTIVATOR
Source organism: Thermoplasma acidophilum; Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-17
Authors: Forster, A., Masters, E.I., Whitby, F.G., Robinson, H., Hill, C.P.
PDB entry 1yav: Crystal structure of CBS domain-containing protein ykuL from Bacillus subtilis
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-12-17
Authors: Kumaran, D., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1yax: Cystal structure Analysis of S.typhimurium PhoQ sensor domain with Calcium
Classification: TRANSFERASE, SIGNALING PROTEIN
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-17
Authors: Cho, U.S., Xu, W.
PDB entry 1yaz: AZIDE-BOUND YEAST CU(II)/ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE (298K) STRUCTURE
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 1998-12-23
Authors: Hart, P.J., Balbirnie, M.M., Ogihara, N.L., Nersissian, A.M., Weiss, M.S., Valentine, J.S., Eisenberg, D.
PDB entry 1yb0: Structure of PlyL
Classification: HYDROLASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2004-12-18
Authors: Low, L.Y., Yang, C., Perego, M., Osterman, A., Liddington, R.C.
PDB entry 1yb1: Crystal structure of human 17-beta-hydroxysteroid dehydrogenase type XI
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2004-12-18
Authors: Lukacik, P., Bunkoczi, G., Kavanagh, K., Ng, S., von Delft, F., Bray, J., Edwards, A., Arrowsmith, C., Sundstrom, M., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 1yb2: Structure of a putative methyltransferase from Thermoplasma acidophilum.
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2004-12-18
Authors: Cuff, M.E., Xu, X., Edwards, A., Savchenko, A., Sanishvili, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1yb3: Conserved hypothetical protein Pfu-178653-001 from Pyrococcus furiosus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-19
Authors: Habel, J., Zhou, W., Chang, J., Zhao, M., Xu, H., Chen, L., Lee, D., Nguyen, D., Chang, S.-H., Horanyi, P., Florence, Q., Tempel, W., Lin, D., Zhang, H., Praissman, J., Jenney Jr., F.E., Adams, M.W.W., Liu, Z.-J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1yb4: Crystal Structure of the Tartronic Semialdehyde Reductase from Salmonella typhimurium LT2
Classification: OXIDOREDUCTASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-20
Authors: Kim, Y., Wu, R., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1yb5: Crystal structure of human Zeta-Crystallin with bound NADP
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2004-12-20
Authors: Debreczeni, J., Berridge, G., Kavanagh, K., Colbrook, S., Bray, J., Williams, L., Oppermann, U., Sundstrom, M., Arrowsmith, C., Edwards, A., Gileadi, O., von Delft, F., Structural Genomics Consortium (SGC)
PDB entry 1yb6: Hydroxynitrile lyase from hevea brasiliensis in complex with mandelonitrile
Classification: LYASE
Source organism: Hevea brasiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2004-12-20
Authors: Gruber, K., Gartler, G., Kratky, C.
PDB entry 1yb7: Hydroxynitrile lyase from hevea brasiliensis in complex with 2,3-dimethyl-2-hydroxy-butyronitrile
Classification: LYASE
Source organism: Hevea brasiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2004-12-20
Authors: Gruber, K., Gartler, G., Kratky, C.
PDB entry 1yb9: Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(N,N-dimethylaminooxy)ethyl] Thymidine (T*)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2004-12-20
Authors: Egli, M., Minasov, G., Tereshko, V., Pallan, P.S., Teplova, M., Inamati, G.B., Lesnik, E.A., Owens, S.R., Ross, B.S., Prakash, T.P., Manoharan, M.
PDB entry 1yba: The active form of phosphoglycerate dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2004-12-20
Authors: Thompson, J.R., Banaszak, L.J.
PDB entry 1ybc: Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(benzyloxy)ethyl] Thymidine (T*)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-12-20
Authors: Egli, M., Minasov, G., Tereshko, V., Pallan, P.S., Teplova, M., Inamati, G.B., Lesnik, E.A., Owens, S.R., Ross, B.S., Prakash, T.P., Manoharan, M.
PDB entry 1ybd: Crystal structure analysis of uridylate kinase from Neisseria meningitidis
Classification: TRANSFERASE
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-12-20
Authors: Kumaran, D., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1ybe: Crystal Structure of a Nicotinate phosphoribosyltransferase
Classification: TRANSFERASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-20
Authors: Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1ybf: Crystal structure of AMP nucleosidase from Bacteroides thetaiotaomicron VPI-5482
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-12-20
Authors: Krishnamurthy, N.R., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1ybg: MurA inhibited by a derivative of 5-sulfonoxy-anthranilic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-12-20
Authors: Eschenburg, S., Priestman, M.A., Abdul-Latif, F.A., Delachaume, C., Fassy, F., Schonbrunn, E.
PDB entry 1ybh: Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide Chlorimuron Ethyl
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-20
Authors: McCourt, J.A., Pang, S.S., King-Scott, J., Guddat, L.W., Duggleby, R.G.
PDB entry 1ybi: Crystal structure of HA33A, a neurotoxin-associated protein from Clostridium botulinum type A
Classification: TOXIN
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2004-12-20
Authors: Arndt, J.W., Gu, J., Jaroszewski, L., Schwarzenbacher, R., Hanson, M., Lebeda, F.J., Stevens, R.C.
PDB entry 1ybj: Structural and Dynamics studies of both apo and holo forms of the hemophore HasA
Classification: METAL BINDING PROTEIN
Source organism: Serratia marcescens
Experimental method: SOLUTION NMR
Deposited: 2004-12-21
Authors: Wolff, N., Izadi-Pruneyre, N., Couprie, J., Habeck, M., Linge, J., Rieping, W., Wandersman, C., Nilges, M., Delepierre, M., Lecroisey, A.
PDB entry 1ybk: RHCC cocrystallized with CAPB
Classification: PROTEIN BINDING
Source organism: Staphylothermus marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2004-12-21
Authors: Stetefeld, J.
PDB entry 1ybl: NMR structure of the i-motif tetramer of d(AACCCC)
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2004-12-21
Authors: Esmaili, N., Leroy, J.-L.
PDB entry 1ybm: X-ray structure of selenomethionyl gene product from Arabidopsis thaliana at5g02240 in space group P21212
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.096 Å
Deposited: 2004-12-21
Authors: Wesenberg, G.E., Smith, D.W., Phillips Jr., G.N., Bitto, E., Bingman, C.A., Allard, S.T.M., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 1ybn: Solution structure of the 3'E topology of the i-motif tetramer of d(CCCCAA)
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2004-12-21
Authors: Esmaili, N., Leroy, J.-L.
PDB entry 1ybo: Crystal structure of the PDZ tandem of human syntenin with syndecan peptide
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-21
Authors: Grembecka, J., Cooper, D.R., Cierpicki, T., Kang, B.S., Devedjiev, Y., Derewenda, Z.
PDB entry 1ybq: Crystal structure of Escherichia coli isoaspartyl dipeptidase mutant D285N complexed with beta-aspartylhistidine
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-12-21
Authors: Marti-Arbona, R., Fresquet, V., Thoden, J.B., Davis, M.L., Holden, H.M., Raushel, F.M.
PDB entry 1ybr: Solution structure of the 5'E topology of the i-motif tetramer of d(CCCCAA)
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2004-12-21
Authors: Esmaili, N., Leroy, J.-L.
PDB entry 1ybt: MYCOBACTERIUM TUBERCULOSIS ADENYLYL CYCLASE, RV1900C CHD
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2004-12-21
Authors: Sinha, S.C., Wetterer, M., Sprang, S.R., Schultz, J.E., Linder, J.U.
PDB entry 1ybu: Mycobacterium tuberculosis adenylyl cyclase Rv1900c CHD, in complex with a substrate analog.
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-21
Authors: Sinha, S.C., Wetterer, M., Sprang, S.R., Schultz, J.E., Linder, J.U.
PDB entry 1ybv: STRUCTURE OF TRIHYDROXYNAPHTHALENE REDUCTASE IN COMPLEX WITH NADPH AND AN ACTIVE SITE INHIBITOR
Classification: OXIDOREDUCTASE
Source organism: Magnaporthe grisea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 1996-09-23
Authors: Andersson, A., Schneider, G., Lindqvist, Y.
PDB entry 1ybw: Protease domain of HGFA with no inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2004-12-21
Authors: Shia, S., Stamos, J., Kirchhofer, D., Fan, B., Wu, J., Corpuz, R.T., Santell, L., Lazarus, R.A., Eigenbrot, C.
PDB entry 1ybx: Conserved hypothetical protein Cth-383 from Clostridium thermocellum
Classification: structural genomics, unknown function
Source organism: Clostridium thermocellum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-12-21
Authors: Tempel, W., Chang, J., Zhao, M., Habel, J., Kataeva, I., Xu, H., Chen, L., Lee, D., Nguyen, J., Chang, S.-H., Horanyi, P., Florence, Q., Zhou, W., Lin, D., Zhang, H., Ljundahl, L., Liu, Z.-J., Rose, J., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1yby: Conserved hypothetical protein Cth-95 from Clostridium thermocellum
Classification: TRANSLATION
Source organism: Clostridium thermocellum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2004-12-21
Authors: Zhao, M., Zhou, W., Chang, J., Habel, J., Kataeva, I., Xu, H., Chen, L., Lee, D., Nguyen, J., Chang, S.-H., Horanyi, P., Florence, Q., Tempel, W., Lin, D., Zhang, H., Ljundahl, L., Liu, Z.-J., Rose, J., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1ybz: Conserved hypothetical protein from Pyrococcus furiosus Pfu-1581948-001
Classification: ISOMERASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2004-12-21
Authors: Lee, D., Chen, L., Nguyen, D., Dillard, B.D., Tempel, W., Habel, J., Zhou, W., Chang, S.-H., Kelley, L.-L.C., Liu, Z.-J., Lin, D., Zhang, H., Praissman, J., Bridger, S., Eneh, J.C., Hopkins, R.C., Jenney Jr., F.E., Lee, H.-S., Li, T., Poole II, F.L., Shah, C., Sugar, F.J., Adams, M.W.W., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1yc0: short form HGFA with first Kunitz domain from HAI-1
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-12-21
Authors: Shia, S., Stamos, J., Kirchhofer, D., Fan, B., Wu, J., Corpuz, R.T., Santell, L., Lazarus, R.A., Eigenbrot, C.
PDB entry 1yc1: Crystal Structures of human HSP90alpha complexed with dihydroxyphenylpyrazoles
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-12-21
Authors: Kreusch, A., Han, S., Brinker, A., Zhou, V., Choi, H., He, Y., Lesley, S.A., Caldwell, J., Gu, X.
PDB entry 1yc2: Sir2Af2-NAD-ADPribose-nicotinamide
Classification: HYDROLASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-21
Authors: Avalos, J.L., Bever, M.K., Wolberger, C.
PDB entry 1yc3: Crystal Structure of human HSP90alpha complexed with dihydroxyphenylpyrazoles
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2004-12-21
Authors: Kreusch, A., Han, S., Brinker, A., Zhou, V., Choi, H., He, Y., Lesley, S.A., Caldwell, J., Gu, X.
PDB entry 1yc4: Crystal structure of human HSP90alpha complexed with dihydroxyphenylpyrazoles
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2004-12-21
Authors: Kreusch, A., Han, S., Brinker, A., Zhou, V., Choi, H., He, Y., Lesley, S.A., Caldwell, J., Gu, X.
PDB entry 1yc5: Sir2-p53 peptide-nicotinamide
Classification: HYDROLASE
Source organism: Thermotoga maritima; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2004-12-21
Authors: Avalos, J.L., Bever, M.K., Wolberger, C.
PDB entry 1yc6: Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus
Classification: VIRUS
Source organism: Brome mosaic virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-12-22
Authors: Larson, S.B., Lucas, R.W., McPherson, A.
PDB entry 1yc7: cAbAn33 VHH fragment against VSG
Classification: IMMUNE SYSTEM
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-22
Authors: Conrath, K., Vincke, C., Stijlemans, B., Schymkowitz, J., Wyns, L., Muyldermans, S., Loris, R.
PDB entry 1yc8: cAbAn33- Y37V/E44G/R45L triple mutant
Classification: IMMUNE SYSTEM
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2004-12-22
Authors: Conrath, K., Vincke, C., Stijlemans, B., Schymkowitz, J., Wyns, L., Muyldermans, S., Loris, R.
PDB entry 1yc9: The crystal structure of the outer membrane protein VceC from the bacterial pathogen Vibrio cholerae at 1.8 resolution
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-12-22
Authors: Federici, L., Du, D., Walas, F., Matsumura, H., Fernandez-Recio, J., McKeegan, K.S., Borges-Walmsley, M.I., Luisi, B.F., Walmsley, A.R.
PDB entry 1yca: DISTAL POCKET POLARITY IN LIGAND BINDING TO MYOGLOBIN: DEOXY AND CARBONMONOXY FORMS OF A THREONINE68 (E11) MUTANT INVESTIGATED BY X-RAY CRYSTALLOGRAPHY AND INFRARED SPECTROSCOPY
Classification: OXYGEN STORAGE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 1993-08-10
Authors: Cameron, A.D., Smerdon, S.J., Wilkinson, A.J., Habash, J., Helliwell, J.R.
PDB entry 1ycb: DISTAL POCKET POLARITY IN LIGAND BINDING TO MYOGLOBIN: DEOXY AND CARBONMONOXY FORMS OF A THREONINE68 (E11) MUTANT INVESTIGATED BY X-RAY CRYSTALLOGRAPHY AND INFRARED SPECTROSCOPY
Classification: OXYGEN STORAGE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 1993-08-10
Authors: Cameron, A.D., Smerdon, S.J., Wilkinson, A.J., Habash, J., Helliwell, J.R.
PDB entry 1ycc: HIGH-RESOLUTION REFINEMENT OF YEAST ISO-1-CYTOCHROME C AND COMPARISONS WITH OTHER EUKARYOTIC CYTOCHROMES C
Classification: ELECTRON TRANSPORT (CYTOCHROME)
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 1990-05-09
Authors: Louie, G.V., Brayer, G.D.
PDB entry 1ycd: Crystal structure of yeast FSH1/YHR049W, a member of the serine hydrolase family
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-12-22
Authors: Leulliot, N., Graille, M., Coste, F., Quevillon-Cheruel, S., Janin, J., van Tilbeurgh, H., Paris-Sud Yeast Structural Genomics (YSG)
PDB entry 1yce: Structure of the rotor ring of F-type Na+-ATPase from Ilyobacter tartaricus
Classification: MEMBRANE PROTEIN
Source organism: Ilyobacter tartaricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-22
Authors: Meier, T., Polzer, P., Diederichs, K., Welte, W., Dimroth, P.
PDB entry 1ycf: Oxidized (di-ferric) FprA from Moorella thermoacetica
Classification: OXIDOREDUCTASE
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2004-12-22
Authors: Silaghi-Dumitrescu, R., Kurtz, D.M., Lanzilotta, W.N.
PDB entry 1ycg: X-ray Structures of Moorella thermoacetica FprA. Novel Diiron Site Structure and Mechanistic Insights into a Scavenging Nitric Oxide Reductase
Classification: OXIDOREDUCTASE
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-12-22
Authors: Silaghi-Dumitrescu, R., Kurtz, D.M., Lanzilotta, W.N.
PDB entry 1ych: X-ray Crystal Structures of Moorella thermoacetica FprA. Novel Diiron Site Structure and Mechanistic Insights into a Scavenging Nitric Oxide Reductase
Classification: OXIDOREDUCTASE
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-12-22
Authors: Silaghi-Dumitrescu, R., Kurtz, D.M., Lanzilotta, W.N.
PDB entry 1yci: Factor inhibiting HIF-1 alpha in complex with N-(carboxycarbonyl)-D-phenylalanine
Classification: Transcription regulator, oxidoreductase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2004-12-22
Authors: McDonough, M.A., Schofield, C.J.
PDB entry 1ycj: Crystal structure of the kainate receptor GluR5 ligand-binding core in complex with (S)-glutamate
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2004-12-22
Authors: Naur, P., Vestergaard, B., Skov, L.K., Egebjerg, J., Gajhede, M., Kastrup, J.S.
PDB entry 1yck: Crystal structure of human peptidoglycan recognition protein (PGRP-S)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-12-22
Authors: Guan, R., Wang, Q., Sundberg, E.J., Mariuzza, R.A.
PDB entry 1ycl: Crystal Structure of B. subtilis LuxS in Complex with a Catalytic 2-Ketone Intermediate
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-12-22
Authors: Rajan, R., Zhu, J., Hu, X., Pei, D., Bell, C.E.
PDB entry 1ycm: Solution Structure of matrix metalloproteinase 12 (MMP12) in the presence of N-Isobutyl-N-[4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-12-22
Authors: Bertini, I., Calderone, V., Cosenza, M., Fragai, M., Lee, Y.M., Luchinat, C., Mangani, S., Terni, B., Turano, P., Structural Proteomics in Europe (SPINE)
PDB entry 1ycn: X-RAY STRUCTURE OF ANNEXIN FROM ARABIDOPSIS THALIANA GENE AT1G35720
Classification: METAL BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2004-12-22
Authors: Wesenberg, G.E., Phillips Jr., G.N., Bitto, E., Bingman, C.A., Allard, S.T.M., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 1yco: Crystal structure of a branched-chain phosphotransacylase from Enterococcus faecalis V583
Classification: TRANSFERASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-22
Authors: Rajashankar, K.R., Kniewel, R., Lee, K., Lima, C.D., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1ycp: THE CRYSTAL STRUCTURE OF FIBRINOGEN-AA PEPTIDE 1-23 (F8Y) BOUND TO BOVINE THROMBIN EXPLAINS WHY THE MUTATION OF PHE-8 TO TYROSINE STRONGLY INHIBITS NORMAL CLEAVAGE AT ARGININE-16
Classification: HYDROLASE/HYDROLASE SUBSTRATE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1997-05-01
Authors: Malkowski, M.G., Edwards, B.F.P.
PDB entry 1ycq: XENOPUS LAEVIS MDM2 BOUND TO THE TRANSACTIVATION DOMAIN OF HUMAN P53
Classification: COMPLEX (ONCOGENE PROTEIN/PEPTIDE)
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1996-09-30
Authors: Kussie, P.H., Pavletich, N.P.
PDB entry 1ycr: MDM2 BOUND TO THE TRANSACTIVATION DOMAIN OF P53
Classification: COMPLEX (ONCOGENE PROTEIN/PEPTIDE)
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 1996-09-30
Authors: Kussie, P.H., Pavletich, N.P.
PDB entry 1ycs: P53-53BP2 COMPLEX
Classification: COMPLEX (ANTI-ONCOGENE/ANKYRIN REPEATS)
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1996-09-30
Authors: Gorina, S., Pavletich, N.P.
PDB entry 1yct: Clustered abasic lesions in dna: nmr solution structure of clustered bistranded +1 abasic lesion
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2004-12-23
Authors: Hazel, R.D., de los Santos, C.
PDB entry 1ycw: Clustered abasic lesions in dna: nmr solution structures of clustered bistranded-1 abasic lesion
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2004-12-23
Authors: Hazel, R.D., de los Santos, C.
PDB entry 1ycy: Conserved hypothetical protein Pfu-1806301-001 from Pyrococcus furiosus
Classification: structural genomics, unknown function
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-12-23
Authors: Huang, L., Liu, Z.-J., Lee, D., Tempel, W., Chang, J., Zhao, M., Habel, J., Xu, H., Chen, L., Nguyen, D., Chang, S.-H., Horanyi, P., Florence, Q., Zhou, W., Lin, D., Zhang, H., Praissman, J., Jenney Jr., F.E., Adams, M.W.W., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1ycz: Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima
Classification: DNA BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-12-23
Authors: Truglio, J.J., Rhau, B., Croteau, D.L., Wang, L., Skorvaga, M., Karakas, E., DellaVecchia, M.J., Wang, H., Van Houten, B., Kisker, C.
PDB entry 1yd0: Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima bound to its catalytic divalent cation: manganese
Classification: DNA BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2004-12-23
Authors: Truglio, J.J., Rhau, B., Croteau, D.L., Wang, L., Skorvaga, M., Karakas, E., DellaVecchia, M.J., Wang, H., Van Houten, B., Kisker, C.
PDB entry 1yd1: Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima bound to its catalytic divalent cation: magnesium
Classification: DNA BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-12-23
Authors: Truglio, J.J., Rhau, B., Croteau, D.L., Wang, L., Skorvaga, M., Karakas, E., DellaVecchia, M.J., Wang, H., Van Houten, B., Kisker, C.
PDB entry 1yd2: Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima: Point mutant Y19F bound to the catalytic divalent cation
Classification: DNA BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-23
Authors: Truglio, J.J., Rhau, B., Croteau, D.L., Wang, L., Skorvaga, M., Karakas, E., DellaVecchia, M.J., Wang, H., Van Houten, B., Kisker, C.
PDB entry 1yd3: Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima: Point mutant Y43F bound to its catalytic divalent cation
Classification: DNA BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-23
Authors: Truglio, J.J., Rhau, B., Croteau, D.L., Wang, L., Skorvaga, M., Karakas, E., DellaVecchia, M.J., Wang, H., Van Houten, B., Kisker, C.
PDB entry 1yd4: Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima: Point mutant Y29F bound to its catalytic divalent cation
Classification: DNA BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-23
Authors: Truglio, J.J., Rhau, B., Croteau, D.L., Wang, L., Skorvaga, M., Karakas, E., DellaVecchia, M.J., Wang, H., Van Houten, B., Kisker, C.
PDB entry 1yd5: Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima: Point mutant N88A bound to its catalytic divalent cation
Classification: DNA BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-12-23
Authors: Truglio, J.J., Rhau, B., Croteau, D.L., Wang, L., Skorvaga, M., Karakas, E., DellaVecchia, M.J., Wang, H., Van Houten, B., Kisker, C.
PDB entry 1yd6: Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Bacillus caldotenax
Classification: DNA BINDING PROTEIN
Source organism: Bacillus caldotenax
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-12-23
Authors: Truglio, J.J., Rhau, B., Croteau, D.L., Wang, L., Skorvaga, M., Karakas, E., DellaVecchia, M.J., Wang, H., Van Houten, B., Kisker, C.
PDB entry 1yd7: Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus
Classification: OXIDOREDUCTASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-23
Authors: Horanyi, P., Florence, Q., Zhou, W., Chang, J., Zhao, M., Habel, J., Xu, H., Chen, L., Lee, D., Nguyen, D., Chang, S.-H., Tempel, W., Lin, D., Zhang, H., Praissman, J., Jenney Jr., F.E., Adams, M.W.W., Liu, Z.-J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1yd8: COMPLEX OF HUMAN GGA3 GAT DOMAIN AND UBIQUITIN
Classification: PROTEIN TRANSPORT, CHROMOSOMAL PROTEIN
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-12-23
Authors: Prag, G., Lee, S., Mattera, R., Arighi, C.N., Beach, B.M., Bonifacino, J.S., Hurley, J.H.
PDB entry 1yd9: 1.6A Crystal Structure of the Non-Histone Domain of the Histone Variant MacroH2A1.1.
Classification: STRUCTURAL PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-23
Authors: Chakravarthy, S., Swamy, G.Y.S.K., Caron, C., Perche, P.Y., Pehrson, J.R., Khochbin, S., Luger, K.
PDB entry 1yda: STRUCTURAL BASIS OF INHIBITOR AFFINITY TO VARIANTS OF HUMAN CARBONIC ANHYDRASE II
Classification: HYDRO-LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 1994-12-22
Authors: Nair, S.K., Christianson, D.W.
PDB entry 1ydb: STRUCTURAL BASIS OF INHIBITOR AFFINITY TO VARIANTS OF HUMAN CARBONIC ANHYDRASE II
Classification: HYDRO-LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1994-12-22
Authors: Nair, S.K., Christianson, D.W.
PDB entry 1ydc: STRUCTURAL BASIS OF INHIBITOR AFFINITY TO VARIANTS OF HUMAN CARBONIC ANHYDRASE II
Classification: HYDRO-LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 1994-12-22
Authors: Nair, S.K., Christianson, D.W.
PDB entry 1ydd: STRUCTURAL BASIS OF INHIBITOR AFFINITY TO VARIANTS OF HUMAN CARBONIC ANHYDRASE II
Classification: HYDRO-LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 1994-12-22
Authors: Nair, S.K., Christianson, D.W.
PDB entry 1yde: Crystal Structure of Human Retinal Short-Chain Dehydrogenase/Reductase 3
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-23
Authors: Lukacik, P., Bunkozci, G., Kavanagh, K., Sundstrom, M., Arrowsmith, C., Edwards, A., von Delft, F., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 1ydf: Crystal structure of a HAD-like phosphatase from Streptococcus pneumoniae
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-12-23
Authors: Seetharaman, J., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1ydg: Crystal Structure of Trp repressor binding protein WrbA
Classification: PROTEIN BINDING
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-12-23
Authors: Gorman, J., Shapiro, L., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1ydh: X-ray structure of a lysine decarboxylase-like protein from arabidopsis thaliana gene at5g11950
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.152 Å
Deposited: 2004-12-23
Authors: Wesenberg, G.E., Phillips Jr., G.N., Bitto, E., Bingman, C.A., Allard, S.T.M., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 1ydi: Human Vinculin Head Domain (VH1, 1-258) in Complex with Human Alpha-Actinin's Vinculin-Binding Site (Residues 731-760)
Classification: Cell Adhesion, Structural Protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-12-23
Authors: Izard, T.
PDB entry 1ydk: Crystal structure of the I219A mutant of human glutathione transferase A1-1 with S-hexylglutathione
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2004-12-24
Authors: Kuhnert, D.C., Sayed, Y., Mosebi, S., Sayed, M., Sewell, T., Dirr, H.W.
PDB entry 1ydl: Crystal Structure of the Human TFIIH, Northeast Structural Genomics Target HR2045.
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-24
Authors: Forouhar, F., Edstrom, W., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 1ydm: X-Ray structure of Northeast Structural Genomics target SR44
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-24
Authors: Kuzin, A.P., Jianwei, S., Vorobiev, S., Acton, T., Xia, R., Ma, L.-C., Montelione, G., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 1ydn: Crystal Structure of the HMG-CoA Lyase from Brucella melitensis, Northeast Structural Genomics Target LR35.
Classification: LYASE
Source organism: Brucella melitensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-24
Authors: Forouhar, F., Abashidze, M., Hussain, M., Vorobiev, S.M., Xiao, R., Ciano, M., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 1ydo: Crystal Structure of the Bacillis subtilis HMG-CoA Lyase, Northeast Structural Genomics Target SR181.
Classification: LYASE
Source organism: Bacillus subtilis subsp. subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2004-12-24
Authors: Forouhar, F., Hussain, M., Edstrom, W., Vorobiev, S.M., Xiao, R., Ciano, M., Shih, L., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 1ydp: 1.9A crystal structure of HLA-G
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-25
Authors: Clements, C.S., Kjer-nielsen, L., Kostenko, L., Hoare, H.L., Dunstone, M.A., Moses, E., Freed, K., Brooks, A.G., Rossjohn, J., Mccluskey, J.
PDB entry 1ydr: STRUCTURE OF CAMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT IN COMPLEX WITH H7 PROTEIN KINASE INHIBITOR 1-(5-ISOQUINOLINESULFONYL)-2-METHYLPIPERAZINE
Classification: COMPLEX (PHOSPHOTRANSFERASE/INHIBITOR)
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1996-07-24
Authors: Engh, R.A., Girod, A., Kinzel, V., Huber, R., Bossemeyer, D.
PDB entry 1yds: Structure of CAMP-dependent protein kinase, alpha-catalytic subunit in complex with H8 protein kinase inhibitor [N-(2-methylamino)ethyl]-5-isoquinolinesulfonamide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1996-07-24
Authors: Engh, R.A., Girod, A., Kinzel, V., Huber, R., Bossemeyer, D.
PDB entry 1ydt: STRUCTURE OF CAMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT IN COMPLEX WITH H89 PROTEIN KINASE INHIBITOR N-[2-(4-BROMOCINNAMYLAMINO)ETHYL]-5-ISOQUINOLINE
Classification: COMPLEX (PHOSPHOTRANSFERASE/INHIBITOR)
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1996-07-24
Authors: Engh, R.A., Girod, A., Kinzel, V., Huber, R., Bossemeyer, D.
PDB entry 1ydu: Solution NMR structure of At5g01610, an Arabidopsis thaliana protein containing DUF538 domain
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 2004-12-26
Authors: Zhao, Q., Cornilescu, C.C., Lee, M.S., Markley, J.L., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 1ydv: TRIOSEPHOSPHATE ISOMERASE (TIM)
Classification: ISOMERASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1997-04-24
Authors: Velankar, S.S., Murthy, M.R.N.
PDB entry 1ydw: X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT4G09670
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.488 Å
Deposited: 2004-12-26
Authors: Wesenberg, G.E., Phillips Jr., G.N., Bitto, E., Bingman, C.A., Allard, S.T.M., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 1ydx: Crystal structure of Type-I restriction-modification system S subunit from M. genitalium
Classification: DNA BINDING PROTEIN
Source organism: Mycoplasma genitalium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-27
Authors: Machado, B., Quijada, O., Pinol, J., Fita, I., Querol, E., Carpena, X.
PDB entry 1ydy: Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-12-27
Authors: Malashkevich, V.N., Fedorov, E., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1ydz: T-To-T(High) quaternary transitions in human hemoglobin: alphaY140F oxy (2MM IHP, 20% PEG) (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2004-12-27
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1ye0: T-To-T(High) quaternary transitions in human hemoglobin: betaV33A oxy (2MM IHP, 20% PEG) (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-27
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1ye1: T-To-T(High) quaternary transitions in human hemoglobin: betaY35A oxy (2MM IHP, 20% PEG) (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.5 Å
Deposited: 2004-12-27
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.