LiteFold/PDB huggingface dataset:
PDB entry 8w9v: structure of TaHKT2;1 in KCl at 2.9 Angstroms resolution
Classification: TRANSPORT PROTEIN
Source organism: Triticum aestivum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-09-05
Authors: Wang, J., Su, N., Guo, J.
PDB entry 8w9w: The cryo-EM structure of human sphingomyelin synthase-related protein in complex with ceramide/phosphoethanolamine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2023-09-06
Authors: Hu, K., Zhang, Q., Chen, Y., Yao, D., Zhou, L., Cao, Y.
PDB entry 8w9x: Structure of a bacterial protein
Classification: IMMUNE SYSTEM
Source organism: Paenibacillus sp. 453mf
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-09-06
Authors: Yu, G., Liao, F., Li, X., Li, Z., Zhang, H.
PDB entry 8w9y: The cryo-EM structure of human sphingomyelin synthase-related protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-09-06
Authors: Hu, K., Zhang, Q., Chen, Y., Yao, D., Zhou, L., Cao, Y.
PDB entry 8w9z: The cryo-EM structure of the Nicotiana tabacum PEP-PAP
Classification: TRANSCRIPTION
Source organism: Nicotiana tabacum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-09-06
Authors: Wu, X.X., Zhang, Y.
PDB entry 8wa0: The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC1
Classification: TRANSCRIPTION
Source organism: Nicotiana tabacum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-09-06
Authors: Wu, X.X., Zhang, Y.
PDB entry 8wa1: The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC2
Classification: TRANSCRIPTION
Source organism: Nicotiana tabacum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-09-06
Authors: Wu, X.X., Zhang, Y.
PDB entry 8wa2: cryo-EM structure of native mastigonemes isolated from Chlamydomonas reinhardtii at 3.0 angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-09-06
Authors: Huang, J., Tao, H., Chen, J., Pan, J., Yan, C., Yan, N.
PDB entry 8wa3: Cryo-EM structure of peptide free and Gs-coupled GIPR
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Homo sapiens; Leptolinea tardivitalis; Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-09-06
Authors: Cong, Z.T., Zhao, F.H., Li, Y., Luo, G., Zhou, Q.T., Yang, D.H., Wang, M.W.
PDB entry 8wa4: Solution structure of free ATF4 promoter G-quadruplex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2023-09-07
Authors: Liu, Y.S., Wang, K.B.
PDB entry 8wa5: Cryo-EM structure of the gastric proton pump Y799W/E936Q mutant in K+-occluded (K+)E2-AlF state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2023-09-07
Authors: Abe, K.
PDB entry 8wa7: E.coli transketolase soaked with donor ketose D-fructose
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-09-07
Authors: Liu, Z., Dai, S., Tittmann, K.
PDB entry 8wa8: Human transketolase in complex with phosphite
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2023-09-07
Authors: Liu, Z., Tittmann, K., Dai, S.
PDB entry 8wa9: Human transketolase soaked with donor ketose D-fructose
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-09-07
Authors: Liu, Z., Tittmann, K., Dai, S.
PDB entry 8waa: Human transketolase soaked with donor ketose D-xylulose
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-09-07
Authors: Liu, Z., Dai, S., Tittmann, K.
PDB entry 8wab: Crystal structure of a chondroitin sulfate-binding carbohydrate binding module of a chondroitinase
Classification: SUGAR BINDING PROTEIN
Source organism: Dysgonomonas sp. HDW5A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-09-07
Authors: Liu, G.C., Chang, Y.G.
PDB entry 8wac: Crystal structure of a novel agarose-binding carbohydrate binding module of an agarase
Classification: SUGAR BINDING PROTEIN
Source organism: Wenyingzhuangia fucanilytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-09-07
Authors: Mei, X.W., Chang, Y.G.
PDB entry 8wae: Crystal structure of a novel porphyran-binding carbohydrate binding module
Classification: SUGAR BINDING PROTEIN
Source organism: Flammeovirga sp. OC4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-09-07
Authors: Mei, X.W., Chang, Y.G.
PDB entry 8waf: Crystal structure of the C-terminal fragment (residues 756-982 with the C864S mutation) of Arabidopsis thaliana CHUP1
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-09-07
Authors: Shimada, A., Takano, A., Nakamura, Y., Kohda, D.
PDB entry 8wag: Crystal structure of the C-terminal fragment (residues 716-982) of Arabidopsis thaliana CHUP1
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.003 Å
Deposited: 2023-09-07
Authors: Shimada, A., Nakamura, Y., Takano, A., Kohda, D.
PDB entry 8wai: Structure of RvY_06210 at 1.45 angstrom resolution
Classification: HYDROLASE
Source organism: Ramazzottius varieornatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-09-07
Authors: Kato, S., Fukuda, Y., Inoue, T.
PDB entry 8wak: Structure of transcribing complex 2 (TC2), the initially transcribing complex with Pol II positioned 2nt downstream of TSS.
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.47 Å
Deposited: 2023-09-07
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wal: Structure of transcribing complex 3 (TC3), the initially transcribing complex with Pol II positioned 3nt downstream of TSS.
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.52 Å
Deposited: 2023-09-07
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wam: Cryo-EM structure of the ABCG25 E232Q mutant bound to ATP and Magnesium
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2023-09-07
Authors: Xin, J., Yan, K.G.
PDB entry 8wan: Structure of transcribing complex 4 (TC4), the initially transcribing complex with Pol II positioned 4nt downstream of TSS.
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.07 Å
Deposited: 2023-09-07
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wao: Structure of transcribing complex 5 (TC5), the initially transcribing complex with Pol II positioned 5nt downstream of TSS.
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.4 Å
Deposited: 2023-09-07
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wap: Structure of transcribing complex 6 (TC6), the initially transcribing complex with Pol II positioned 6nt downstream of TSS.
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.85 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8waq: Structure of transcribing complex 7 (TC7), the initially transcribing complex with Pol II positioned 7nt downstream of TSS.
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.29 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8war: Structure of transcribing complex 8 (TC8), the initially transcribing complex with Pol II positioned 8nt downstream of TSS.
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.2 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8was: Structure of transcribing complex 9 (TC9), the initially transcribing complex with Pol II positioned 9nt downstream of TSS.
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.13 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wat: De novo transcribing complex 10 (TC10), the early elongation complex with Pol II positioned 10nt downstream of TSS
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wau: De novo transcribing complex 11 (TC11), the early elongation complex with Pol II positioned 11nt downstream of TSS
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wav: De novo transcribing complex 12 (TC12), the early elongation complex with Pol II positioned 12nt downstream of TSS
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8waw: De novo transcribing complex 13 (TC13), the early elongation complex with Pol II positioned 13nt downstream of TSS
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wax: De novo transcribing complex 14 (TC14), the early elongation complex with Pol II positioned 14nt downstream of TSS
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8way: De novo transcribing complex 15 (TC15), the early elongation complex with Pol II positioned 15nt downstream of TSS
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8waz: De novo transcribing complex 16 (TC16), the early elongation complex with Pol II positioned 16nt downstream of TSS
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wb0: De novo transcribing complex 17 (TC17), the early elongation complex with Pol II positioned 17nt downstream of TSS
Classification: TRANSCRIPTION
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-09-08
Authors: Chen, X., Liu, W., Wang, Q., Wang, X., Ren, Y., Qu, X., Li, W., Xu, Y.
PDB entry 8wb1: Crystal Structure of small molecule KN2H covalently bound to K-Ras(G12D)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-09-08
Authors: Zhou, L., Zhang, R., Shuai, T.B.
PDB entry 8wb2: Heme-bound Arabidopsis thaliana temperature-induced lipocalin
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-09-08
Authors: Dong, C., Liu, L.
PDB entry 8wb3: Human H Chain Ferritin mutant-K86Q with 2 Fe(III)/subunit loading
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2023-09-08
Authors: Zhang, T., Jiao, R.
PDB entry 8wb4: Structure of PSII-ACPII supercomplex from cryptophyte algae
Classification: PHOTOSYNTHESIS
Source organism: Chroomonas placoidea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2023-09-08
Authors: Li, X.Y., Mao, Z.Y., Shen, J.R., Han, G.Y.
PDB entry 8wb6: Cryo-EM structure of Snf7 N-terminal domain in outer coils of spiral polymers
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2023-09-08
Authors: Liu, M.D., Shen, Q.T.
PDB entry 8wb7: CryoEM structure of Snf7 N-terminal domain in the inner coils of spiral
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.4 Å
Deposited: 2023-09-08
Authors: Liu, M.D., Shen, Q.T.
PDB entry 8wb8: Crystal Structure of the shaft pilin LrpA from Ligilactobacillus ruminis - orthorhombic form
Classification: CELL ADHESION
Source organism: Ligilactobacillus ruminis ATCC 25644
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-09-09
Authors: Prajapati, A., Palva, A., von Ossowski, I., Krishnan, V.
PDB entry 8wba: Cryo-EM structure of the ABCG25 bound to CHS
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-09-09
Authors: Xin, J., Yan, K.G.
PDB entry 8wbb: CryoEM structure of non-structural protein 1 dimer from dengue virus type 4
Classification: VIRAL PROTEIN
Source organism: Dengue virus 4 Philippines/H241/1956
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-09-09
Authors: Jiao, H.Z., Pan, Q., Hu, H.L.
PDB entry 8wbc: CryoEM structure of non-structural protein 1 tetramer from dengue virus type 4
Classification: VIRAL PROTEIN
Source organism: Dengue virus 4 Philippines/H241/1956
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2023-09-09
Authors: Jiao, H.Z., Pan, Q., Hu, H.L.
PDB entry 8wbd: CryoEM structure of non-structural protein 1 hexamer 1 from dengue virus type 4
Classification: VIRAL PROTEIN
Source organism: Dengue virus 4 Philippines/H241/1956
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-09-09
Authors: Jiao, H.Z., Pan, Q., Hu, H.L.
PDB entry 8wbe: CryoEM structure of non-structural protein 1 hexamer 2 from dengue virus type 4
Classification: VIRAL PROTEIN
Source organism: Dengue virus 4 Philippines/H241/1956
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-09-09
Authors: Jiao, H.Z., Pan, Q., Hu, H.L.
PDB entry 8wbf: CryoEM structure of non-structural protein 1 tetramer from ZIKA virus
Classification: VIRAL PROTEIN
Source organism: dengue virus type 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-09-09
Authors: Jiao, H.Z., Pan, Q., Hu, H.L.
PDB entry 8wbg: CryoEM structure of non-structural protein 1 tetramer from ZIKA virus
Classification: VIRAL PROTEIN
Source organism: dengue virus type 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-09-09
Authors: Jiao, H.Z., Pan, Q., Hu, H.L.
PDB entry 8wbh: CryoEM structure of non-structural protein 1 tetramer from Japanese encephalitis virus
Classification: VIRAL PROTEIN
Source organism: Japanese encephalitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-09-09
Authors: Jiao, H.Z., Pan, Q., Hu, H.L.
PDB entry 8wbk: Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L]
Classification: HYDROLASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbl: Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] complexed with sulfate ions
Classification: HYDROLASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.941 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbm: Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] mutant D193A complexed with sulfate ions
Classification: HYDROLASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbn: Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] mutant D193N
Classification: HYDROLASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbo: Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] mutant D18N complexed with sulfate ions
Classification: HYDROLASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbp: Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] mutant E212Q
Classification: HYDROLASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbq: Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] mutant E212Q complexed with L-TA.
Classification: HYDROLASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbr: Crystal structure of cis-Epoxysuccinate Hydrolases KlCESH[L]
Classification: HYDROLASE
Source organism: Klebsiella sp. BK-58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbs: Crystal structure of cis-Epoxysuccinate Hydrolases KlCESH[L]-D48N complexed with sulfate ions
Classification: HYDROLASE
Source organism: Klebsiella sp. BK-58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbt: Crystal structure of cis-Epoxysuccinate Hydrolases KlCESH[L] mutant D48N complexed with L-TA
Classification: HYDROLASE
Source organism: Klebsiella sp. BK-58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-09-10
Authors: Dong, S., Xuan, J.S., Feng, Y.G., Cui, Q.
PDB entry 8wbu: The crystal structure of circular mannose with mutant H247F of the cellobiose 2-epimerase from Caldicellulosiruptor saccharolyticus
Classification: ISOMERASE
Source organism: Caldicellulosiruptor saccharolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-09-10
Authors: Yang, R.J., Feng, Y.H.
PDB entry 8wbv: The crystal structure of linear mannose with mutant H247F of the cellobiose 2-epimerase from Caldicellulosiruptor saccharolyticus
Classification: ISOMERASE
Source organism: Caldicellulosiruptor saccharolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-09-10
Authors: Yang, R.J., Feng, Y.H.
PDB entry 8wbx: Cryo-EM structure of the ABCG25 bound to ABA
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2023-09-10
Authors: Xin, J., Yan, K.G.
PDB entry 8wby: Cryo-EM structure of ACE2-B0AT1 complex with JX98
Classification: PROTEIN TRANSPORT/HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2023-09-10
Authors: Yan, R., Hu, Z., Dai, L.
PDB entry 8wbz: Cryo-EM structure of ACE2-B0AT1 complex with JX225
Classification: PROTEIN TRANSPORT/HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-09-10
Authors: Yan, R., Hu, Z., Dai, L.
PDB entry 8wc0: Crystal structure of EcThsA
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.249 Å
Deposited: 2023-09-11
Authors: Chen, Q., Yu, Y.
PDB entry 8wc1: A carbohydrate binding domain of a putative pectate lyase
Classification: LYASE
Source organism: Monoglobus pectinilyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-09-11
Authors: Liu, G.C., Chang, Y.G.
PDB entry 8wc3: Cryo-EM structure of the SEP363856-bound mTAAR1-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wc4: Cryo-EM structure of the ZH8651-bound mTAAR1-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wc5: Cryo-EM structure of the TMA-bound mTAAR1-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wc6: Cryo-EM structure of the PEA-bound mTAAR1-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wc7: Cryo-EM structure of the ZH8667-bound mTAAR1-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wc8: Cryo-EM structure of the ZH8651-bound hTAAR1-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wc9: Cryo-EM structure of the ZH8651-bound mTAAR1-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wca: Cryo-EM structure of the PEA-bound hTAAR1-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wcb: Cryo-EM structure of the CHA-bound mTAAR1-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wcc: Cryo-EM structure of the CHA-bound mTAAR1 complex
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-09-11
Authors: Rong, N.K., Guo, L.L., Zhang, M.H., Li, Q., Yang, F., Sun, J.P.
PDB entry 8wce: Cryo-EM structure of a protein-RNA complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: unidentified; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2023-09-11
Authors: Li, Z.
PDB entry 8wcf: Crystal structure of EcThsB
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-09-12
Authors: Chen, Q., Yu, Y.
PDB entry 8wcg: Crystal structure of SARS-CoV-1 RBD in complex with nanobody aSR29 and aSR347
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.599 Å
Deposited: 2023-09-12
Authors: Zeng, W.H., Ma, H., Jin, T.C.
PDB entry 8wch: Crystal structure of SAR11_0655 bound to a co-purified ligand, L-pyroglutamate
Classification: TRANSPORT PROTEIN
Source organism: Candidatus Pelagibacter ubique HTCC1062
Experimental method: X-RAY DIFFRACTION
Resolution: 1.519 Å
Deposited: 2023-09-12
Authors: Clifton, B.E., Laurino, P.
PDB entry 8wci: Cryo-EM structure of the inhibitor-bound Vo complex from Enterococcus hirae
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Enterococcus hirae ATCC 9790
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-09-12
Authors: Suzuki, K., Mikuriya, S., Adachi, N., Kawasaki, M., Senda, T., Moriya, T., Murata, T.
PDB entry 8wcj: Crystal structure of GB3 penta mutation L5V/K10H/T16S/K19E/Y33I
Classification: IMMUNE SYSTEM
Source organism: Streptococcus sp. group G
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-09-12
Authors: Qin, M.M., Chen, X.X., Zhang, X.Y., Song, X.F., Yao, L.S.
PDB entry 8wck: FCP tetramer in Chaetoceros gracilis
Classification: PHOTOSYNTHESIS
Source organism: Chaetoceros neogracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2023-09-12
Authors: Feng, Y., Li, Z., Zhou, C., Shen, J.-R., Liu, C., Wang, W.
PDB entry 8wcl: FCP pentamer in Chaetoceros gracilis
Classification: PHOTOSYNTHESIS
Source organism: Chaetoceros neogracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2023-09-12
Authors: Feng, Y., Li, Z., Zhou, C., Liu, C., Shen, J.-R., Wang, W.
PDB entry 8wcm: NSs filament formation determines RVFV pathogenesis
Classification: VIRAL PROTEIN
Source organism: Rift Valley fever virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-09-13
Authors: Li, H., Rao, G., Cao, S., Peng, K.
PDB entry 8wcn: Cryo-EM structure of PAO1-ImcA with GMPCPP
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-09-13
Authors: Zhan, X.L., Zhang, K., Wang, C.C., Fan, Q., Tang, X.J., Zhang, X., Wang, K., Fu, Y., Liang, H.H.
PDB entry 8wco: (S)-citramalyl-CoA lyase
Classification: LYASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-09-13
Authors: Huang, Q., Bao, R.
PDB entry 8wcp: Cryo-EM structure of human disease-associated P301L Tau amyloid fibril from mouse brain
Classification: PROTEIN FIBRIL
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2023-09-13
Authors: Liu, K.E., Zhao, W.B., Liu, C.
PDB entry 8wcq: Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in intermediate state
Classification: MEMBRANE PROTEIN
Source organism: Gloeobacter violaceus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2023-09-13
Authors: Bharambe, N., Li, Z., Basak, S.
PDB entry 8wcr: Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in open state
Classification: MEMBRANE PROTEIN
Source organism: Gloeobacter violaceus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2023-09-13
Authors: Bharambe, N., Li, Z., Basak, S.
PDB entry 8wcs: Cryo-EM structure of Cas13h1-crRNA binary complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: unidentified; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-09-13
Authors: Zhang, C.
PDB entry 8wct: The crystal structure of the CHASE4 domain of iron-sensetive membrane protein (IsmP,Uniprot ID:Q9I243)
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-09-13
Authors: Wang, C.C.
PDB entry 8wcw: Cryo-EM structure of MsRv1273c/72c from Mycobacterium smegmatis in the IFapo state
Classification: TRANSPORT PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2023-09-14
Authors: Yu, J., Li, J.
PDB entry 8wcx: Cryo-EM structure of MsRv1273c/72c from Mycobacterium smegmatis in the AMPPNP-bound IFasym-1 state
Classification: TRANSPORT PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2023-09-14
Authors: Yu, J., Li, J.
PDB entry 8wd0: Crystal structure of T2R-TTL-Erianin complex
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-09-14
Authors: Yang, J.
PDB entry 8wd2: The Crystal Structure of p53 from Biortus.
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-09-14
Authors: Wang, F., Cheng, W., Yuan, Z., Qi, J., Lu, Y.
PDB entry 8wd3: The Crystal Structure of JMJD2A(M1-L359) from Biortus.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-09-14
Authors: Wang, F., Cheng, W., Lv, Z., Ju, C., Bao, C.
PDB entry 8wd4: EGFR(L858R/T790/C797S) in complex with compound 5j
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-09-14
Authors: Nishikawa, Y.
PDB entry 8wd5: Crystal structure of farnesyl diphosphate synthase FPPS1 from silkworm, Bombyx mori
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-09-14
Authors: Guo, P.C., Fang, H.
PDB entry 8wd6: Cryo-EM structure of the ABCG25
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-09-14
Authors: Xin, J., Yan, K.G.
PDB entry 8wd7: Structural organization of the palisade layer in isolated vaccinia virus cores
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus (strain Western Reserve)
Experimental method: ELECTRON MICROSCOPY
Resolution: 10 Å
Deposited: 2023-09-14
Authors: Liu, Y., Qu, X., Duan, M., Shi, X., Liu, S., Shi, Y., Gao, G.F.
PDB entry 8wd8: Cryo-EM structure of TtdAgo-guide DNA-target DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Thermococcus thioreducens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-09-14
Authors: Zhuang, L.
PDB entry 8wd9: Cryo-EM structure of Mycobacterium tuberculosis DppABCD in apo form
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2023-09-14
Authors: Hu, T., Zhang, B., Rao, Z.
PDB entry 8wda: Cryo-EM structure of the substrate-bound DppABCD complex
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv); Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-09-14
Authors: Hu, T., Zhang, B., Rao, Z.
PDB entry 8wdb: Cryo-EM structure of the ATP-bound DppABCD complex
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-09-14
Authors: Hu, T., Zhang, B., Rao, Z.
PDB entry 8wdc: Structural organization of the palisade layer in intracellular mature vaccinia virions
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus (strain Western Reserve)
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.7 Å
Deposited: 2023-09-14
Authors: Liu, Y., Qu, X., Duan, M., Shi, X., Liu, S., Shi, Y., Gao, G.F.
PDB entry 8wdd: Crystal structure of BSA in complex with B1
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2023-09-14
Authors: Chen, X., Ge, Y.H., Yang, H., Fang, B., Li, L.
PDB entry 8wde: CryoEM structure of the spike protein of human CoV 229E in complex with receptor hAPN (composite map)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human coronavirus 229E
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-09-15
Authors: Hsu, S.T.D., Tsai, Y.X.
PDB entry 8wdf: Chemoreceptor PilJ from Pseudomonas aeruginosa PA14
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.996 Å
Deposited: 2023-09-15
Authors: Cui, R., Li, D.F.
PDB entry 8wdg: Subatomic crystal structure of glucose isomerase from Streptomyces rubiginosus
Classification: ISOMERASE
Source organism: Streptomyces rubiginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2023-09-15
Authors: Nam, K.H.
PDB entry 8wdh: Crystal structure of glucose isomerase by fixed-target pink-beam serial synchrotron crystallography
Classification: ISOMERASE
Source organism: Streptomyces rubiginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-09-15
Authors: Nam, K.H.
PDB entry 8wdi: Crystal structure of lysozyme by fixed-target pink-beam serial synchrotron crystallography
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-09-15
Authors: Nam, K.H.
PDB entry 8wdk: The complex structure of Cul2-VCB-Protac-Wee1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2023-09-15
Authors: Wang, P., Zhang, T.T.
PDB entry 8wdm: Crystal structure of a novel PU plastic degradation enzyme from Thermaerobacter marianensis
Classification: HYDROLASE
Source organism: Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-09-15
Authors: Li, Z.S., Wang, H., Gao, J., Chen, Y.Y., Wei, H.L., Li, Q., Han, X., Wei, R., Liu, W.D.
PDB entry 8wdn: Crystal structure of PDE4D complexed with 7b-1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-09-15
Authors: Liu, J.Y., Li, M.J., Xu, Y.C.
PDB entry 8wdo: Crystal structure of PDE4D complexed with DCN
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2023-09-15
Authors: Liu, J.Y., Li, M.J., Xu, Y.C.
PDB entry 8wdq: Crystal Structure of Pseudomonas aeruginosa SuhB in complex with D-myo-inositol-1-phosphate
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-09-15
Authors: Yadav, V.K., Maji, S., Shukla, M., Bhattacharyya, S.
PDB entry 8wdr: Crystal structure of BQ.1.1 RBD complexed with human ACE2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.47 Å
Deposited: 2023-09-16
Authors: Li, W., Xie, Y.
PDB entry 8wds: Crystal structure of BF.7 RBD complexed with human ACE2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2023-09-16
Authors: Li, W., Xie, Y.
PDB entry 8wdt: Crystal structure of the human adenosine A2A receptor in complex with photoresponsive ligand photoNECA(blue)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.34 Å
Deposited: 2023-09-16
Authors: Araya, T., Asada, H., Iwata, S., Im, D.H.
PDB entry 8wdu: Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by sucrose density
Classification: PHOTOSYNTHESIS
Source organism: Allochromatium vinosum DSM 180
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.24 Å
Deposited: 2023-09-16
Authors: Tani, K., Kanno, R., Harada, A., Kobayashi, A., Minamino, A., Nakamura, N., Ji, X.-C., Purba, E.R., Hall, M., Yu, L.-J., Madigan, M.T., Mizoguchi, A., Iwasaki, K., Humbel, B.M., Kimura, Y., Wang-Otomo, Z.-Y.
PDB entry 8wdv: Photosynthetic LH1-RC complex from the purple sulfur bacterium Allochromatium vinosum purified by Ca2+-DEAE
Classification: PHOTOSYNTHESIS
Source organism: Allochromatium vinosum DSM 180
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.24 Å
Deposited: 2023-09-16
Authors: Tani, K., Kanno, R., Harada, A., Kobayashi, A., Minamino, A., Nakamura, N., Ji, X.-C., Purba, E.R., Hall, M., Yu, L.-J., Madigan, M.T., Mizoguchi, A., Iwasaki, K., Humbel, B.M., Kimura, Y., Wang-Otomo, Z.-Y.
PDB entry 8wdw: Crystal structure of a novel PU plastic degradation urethanase UMG-SP2 from uncultured bacterium
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2023-09-16
Authors: Cong, L., Li, Z.S., Gao, J., Li, Q., Chen, Y.Y., Han, X., Gert, W., Wei, R., Liu, W.D., Bornscheuer, U.T.
PDB entry 8wdx: Crystal structure of human FABP4 complexed with C3
Classification: LIPID BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-09-16
Authors: Xie, H., Chen, G.F., Xu, Y.C.
PDB entry 8wdy: SARS-CoV-2 Omicron BQ.1.1 RBD complexed with human ACE2
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2023-09-16
Authors: Li, W., Xie, Y.
PDB entry 8wdz: SARS-CoV-2 Omicron BQ.1 RBD complexed with human ACE2
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2023-09-16
Authors: Li, W., Xie, Y.
PDB entry 8we0: SARS-CoV-2 Omicron XBB RBD complexed with human ACE2
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-09-16
Authors: Li, W., Xie, Y.
PDB entry 8we1: SARS-CoV-2 Omicron BF.7 RBD complexed with human ACE2
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2023-09-16
Authors: Li, W., Xie, Y.
PDB entry 8we2: 14-3-3 zeta complexed with S609 phosphorylated peptide derived from GPIb alpha cytoplasmic domain
Classification: BLOOD CLOTTING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2023-09-16
Authors: Shu, Z.M., Zhou, A.W.
PDB entry 8we3: Crystal structure of human FABP4 complexed with C7
Classification: LIPID BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-09-16
Authors: Xie, H., Chen, G.F., Xu, Y.C., Li, M.J.
PDB entry 8we4: SARS-CoV-2 Omicron XBB.1.5 RBD complexed with human ACE2 and S304
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2023-09-17
Authors: Li, W., Xie, Y.
PDB entry 8we5: Durio zibethinus trypsin inhibitor DzTI-6
Classification: PLANT PROTEIN
Source organism: Durio zibethinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-09-17
Authors: Deetanya, P., Wangkanont, K.
PDB entry 8we6: Human L-type voltage-gated calcium channel Cav1.2 at 2.9 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-09-17
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8we7: Human L-type voltage-gated calcium channel Cav1.2 in the presence of calciseptine at 3.2 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-09-17
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8we8: Human L-type voltage-gated calcium channel Cav1.2 in the presence of calciseptine, amlodipine and pinaverium at 2.9 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-09-17
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8we9: Human L-type voltage-gated calcium channel Cav1.2 (Class I) in the presence of pinaverium at 3.0 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-09-17
Authors: Gao, S., Yao, X., Fan, X., Yan, N.
PDB entry 8wea: Human L-type voltage-gated calcium channel Cav1.2 (Class II) in the presence of pinaverium at 3.2 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-09-17
Authors: Gao, S., Yao, X., Fan, X., Yan, N.
PDB entry 8web: Crystal structure of Arabidopsis thaliana MIK2 ectodomain
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-09-17
Authors: Wan, L.H., Hu, Y.X., Wu, H.M.
PDB entry 8wec: Crystal structure of Arabidopsis thaliana MIK2 ectodomain in complex with BAK1 ectodomain and SCOOP12
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-09-17
Authors: Wan, L.H., Hu, Y.X., Wu, H.M.
PDB entry 8wed: Crystal structure of Arabidopsis thaliana MIK2 ectodomain in complex with BAK1 ectodomain and Fusarium oxysporum SCOOPL
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-09-17
Authors: Wan, L.H., Hu, Y.X., Wu, H.M.
PDB entry 8wee: Crystal structure of Arabidopsis thaliana MIK2 ectodomain in complex with SCOOP12
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2023-09-17
Authors: Wan, L.H., Hu, Y.X., Wu, H.M.
PDB entry 8wef: Crystal structure of Brassica napus MIK2 ectodomain in complex with Fusarium oxysporum SCOOPL
Classification: PLANT PROTEIN
Source organism: Brassica napus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-09-17
Authors: Wan, L.H., Hu, Y.X., Wu, H.M.
PDB entry 8weg: Crystal structure of Brassica napus MIK2 ectodomain
Classification: PLANT PROTEIN
Source organism: Brassica napus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-09-17
Authors: Wan, L.H., Hu, Y.X., Wu, H.M.
PDB entry 8weh: Crystal structure of Brassica napus MIK2 ectodomain (N393A mutant)
Classification: PLANT PROTEIN
Source organism: Brassica napus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2023-09-17
Authors: Wan, L.H., Hu, Y.X., Wu, H.M.
PDB entry 8wei: Crystal structure of Brassica napus MIK2 ectodomain (N393D mutant)
Classification: PLANT PROTEIN
Source organism: Brassica napus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2023-09-17
Authors: Wan, L.H., Hu, Y.X., Wu, H.M.
PDB entry 8wej: Structure of human phagocyte NADPH oxidase in the activated state
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-09-18
Authors: Chen, L., Liu, X.
PDB entry 8wem: Bacteroides fragilis toxin 1
Classification: TOXIN
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-09-18
Authors: Guo, Y., Wen, Y.
PDB entry 8wen: Bacteroides fragilis toxin 2
Classification: TOXIN
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-09-18
Authors: Guo, Y., Wen, Y.
PDB entry 8weo: Bacteroides fragilis toxin in complex with neutralization nanobody
Classification: TOXIN/IMMUNE SYSTEM
Source organism: Bacteroides fragilis; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-09-18
Authors: Guo, Y., Wen, Y.
PDB entry 8wep: Zn-Carbonic Anhydrase II 5 atm of CO2 pressure (pH 7.8)
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-09-18
Authors: Kim, C.U., Kim, J.K.
PDB entry 8weq: p-hydroxybenzoate 3-monooxygenase
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter sp. PAMC25564
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2023-09-18
Authors: Kim, S.B., Park, H.H.
PDB entry 8wer: Carbonic Anhydrase II T200V variant 0 atm CO2 pressure (pH 7.8)
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-09-18
Authors: Kim, C.U., Kim, J.K.
PDB entry 8wes: Carbonic Anhydrase II T200V variant 5 atm CO2 pressure (pH 7.8)
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-09-18
Authors: Kim, C.U., Kim, J.K.
PDB entry 8wet: The cryo-EM structure of TdpAB complex
Classification: TRANSLOCASE
Source organism: Thermus antranikianii DSM 12462
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2023-09-18
Authors: An, T., Tan, Q.
PDB entry 8weu: Crystal structure of Feruoyl-CoA Synthetase from Amycolatopsis thermoflava
Classification: LIGASE
Source organism: Amycolatopsis thermoflava N1165
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-09-18
Authors: Seok, J., Kim, K.-J.
PDB entry 8wev: Crystal structure of Feruoyl-CoA Synthetase complexed with AMP from Amycolatopsis thermoflava
Classification: LIGASE
Source organism: Amycolatopsis thermoflava N1165
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2023-09-18
Authors: Seok, J., Kim, K.-J.
PDB entry 8wex: Crystal structure of N-acetyl sugar amidotransferase from Legionella pneumophila
Classification: TRANSFERASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2023-09-19
Authors: Gao, J., Xu, W., Ge, H.
PDB entry 8wey: PSI-LHCI of the red alga Cyanidium caldarium RK-1 (NIES-2137)
Classification: PHOTOSYNTHESIS
Source organism: Cyanidium caldarium
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.92 Å
Deposited: 2023-09-19
Authors: Kato, K., Hamaguchi, T., Nakajima, Y., Kawakami, K., Yonekura, K., Shen, J.R., Nagao, R.
PDB entry 8wf4: The Crystal Structure of RSK1 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-09-19
Authors: Wang, F., Cheng, W., Lv, Z., Qi, J., Li, J.