LiteFold/PDB huggingface dataset:
PDB entry 9bvb: Crystal structure of human CYP3A4 in complex with SJYHJ-075
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-05-20
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.
PDB entry 9bvc: Crystal structure of human CYP3A4 in complex with SJYHJ-110
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-20
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.
PDB entry 9bvd: Crystal structure of SRY HMG box bound to DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-05-20
Authors: Georgiadis, M.M.
PDB entry 9bve: Identification of multiple ligand hotspots on SOS2, compound 9
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-05-20
Authors: Phan, J., Fesik, S.W.
PDB entry 9bvf: Identification of multiple ligand hotspots on SOS2, compound 6
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.822 Å
Deposited: 2024-05-20
Authors: Phan, J., Fesik, S.W.
PDB entry 9bvh: Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine in an apo state.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2024-05-20
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bvi: Identification of multiple ligand hotspots on SOS2, compound 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.787 Å
Deposited: 2024-05-20
Authors: Phan, J., Fesik, S.W.
PDB entry 9bvj: Homomeric alpha3 glycine receptor in the presence of 1 mM glycine in an desensitized state.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-20
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bvk: Vitamin K-dependent gamma-carboxylase with factor IX propeptide and glutamate-rich region and with vitamin K hydroquinone
Classification: MEMBRANE PROTEIN,LYASE/SUBSTRATE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-20
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9bvl: Vitamin K-dependent gamma-carboxylase with factor X propeptide and glutamate-rich region and with vitamin K hydroquinone
Classification: MEMBRANE PROTEIN,LYASE/SUBSTRATE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-05-20
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9bvm: Vitamin K-dependent gamma-carboxylase with protein C propeptide and glutamate-rich region and with vitamin K hydroquinone
Classification: MEMBRANE PROTEIN,LYASE/SUBSTRATE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-05-20
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9bvo: Vitamin K-dependent gamma-carboxylase in apo state
Classification: MEMBRANE PROTEIN,LYASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2024-05-20
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9bvp: Vitamin K-dependent gamma-carboxylase with TMG2 propeptide and glutamate-rich region and with vitamin K hydroquinone
Classification: MEMBRANE PROTEIN,LYASE/SUBSTRATE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-20
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9bvq: Vitamin K-dependent gamma-carboxylase with TMG2 propeptide and glutamate-rich region
Classification: MEMBRANE PROTEIN,LYASE/SUBSTRATE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-20
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9bvr: Vitamin K-dependent gamma-carboxylase with factor IX propeptide and partially carboxylated glutamate-rich region and with vitamin K hydroquinone and calcium
Classification: MEMBRANE PROTEIN,LYASE/SUBSTRATE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-05-20
Authors: Li, W., Liu, B., Cao, Q.
PDB entry 9bvs: NMR structure of TLP-1 in solution
Classification: ANTIVIRAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-05-20
Authors: Jia, R., McShan, A.C., Stewart, J., Halim, M.
PDB entry 9bvt: RNA Pol II - High Mn(+2) concentration
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2024-05-20
Authors: Calero, G.
PDB entry 9bvu: NMR structure of TLP-2 in solution
Classification: ANTIVIRAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-05-20
Authors: Jia, R., McShan, A.C., Stewart, J., Halim, M.
PDB entry 9bvv: NMR structure of TLP-3 in solution
Classification: ANTIVIRAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-05-20
Authors: Jia, R., McShan, A.C., Stewart, J., Halim, M.
PDB entry 9bvw: SARS-CoV-2 main protease bound to inhibitor SR-B-103
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-20
Authors: Liu, W.R., Blankenship, L.R.
PDB entry 9bvx: SARS-CoV-2 main protease bound to inhibitor YR-C-155
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-20
Authors: Liu, W.R., Blankenship, L.R.
PDB entry 9bvy: Neutron Structure of Peroxide-Soaked Tyr34Phe MnSOD
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: NEUTRON DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-20
Authors: Azadmanesh, J., Slobodnik, K., Struble, L.R., Cone, E.A., Dasgupta, M., Lutz, W.E., Kumar, S., Natarajan, A., Coates, L., Weiss, K.L., Myles, D.A.A., Kroll, T., Borgstahl, G.E.O.
PDB entry 9bvz: SARS-CoV-2 main protease bound to inhibitor AR-A-135
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-20
Authors: Liu, W.R., Blankenship, L.R.
PDB entry 9bw0: RNA Polymerase II - No ATP
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.51 Å
Deposited: 2024-05-20
Authors: Calero, G.
PDB entry 9bw1: TnsABCD-DNA transpososome
Classification: DNA BINDING PROTEIN/DNA
Source organism: Peltigera membranacea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-05-20
Authors: Chang, L., Wang, S.
PDB entry 9bw2: Neutron Structure of Reduced Tyr34Phe MnSOD
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: NEUTRON DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-20
Authors: Azadmanesh, J., Slobodnik, K., Struble, L.R., Cone, E.A., Dasgupta, M., Lutz, W.E., Kumar, S., Natarajan, A., Coates, L., Weiss, K.L., Myles, D.A.A., Kroll, T., Borgstahl, G.E.O.
PDB entry 9bw3: Consensus model for preturnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2024-05-20
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bw4: TXNL1-bound proteasome
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-20
Authors: Gao, J., Yip, M.C.J., Shao, S.
PDB entry 9bw5: Human Vault Cage
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-20
Authors: Lodwick, J.E., Zhao, M.
PDB entry 9bw6: Human Vault Cage in complex with PARP4
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-20
Authors: Lodwick, J.E., Zhao, M.
PDB entry 9bw7: Human Vault Cage in complex with PARP4 and NAD+
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-20
Authors: Lodwick, J.E., Zhao, M.
PDB entry 9bw8: Structure of P450Blt from Micromonospora sp. MW-13 in Complex with Fluorinated Biarylitide
Classification: OXIDOREDUCTASE
Source organism: Micromonospora sp. MW-13; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-05-21
Authors: Hansen, M.H., Cryle, M.J., Zhao, Y.
PDB entry 9bw9: Tetrameric Complex of full-length HIV-1 integrase protein bound to the integrase binding domain of LEDGF/p75
Classification: VIRAL PROTEIN
Source organism: HIV-1 06TG.HT008; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-05-21
Authors: Jing, T., Shan, Z., Lyumkis, D., Biswas, A.
PDB entry 9bwa: Crystal structure of the Transport and Golgi Organization protein 2 Homolog (TANGO2)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-21
Authors: Lovell, S., Cooper, A., Powers, A., Battaile, K.P., Mohsen, A.-W., Ghaloul-Gonzalez, L.
PDB entry 9bwb: Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in a desensitized state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2024-05-21
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bwc: Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in an apo state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2024-05-21
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bwd: Cryo-EM structure of respiratory supercomplex I
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-05-21
Authors: Zhang, Z., Maharjan, R., Tringides, M.
PDB entry 9bwe: Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine at pH 6.4 in an intermediate state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2024-05-21
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bwf: Crystal structure of cellulose oxidative enzyme without ligand
Classification: OXIDOREDUCTASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-05-21
Authors: Morais, M.A.B., Santos, C.A., Araujo, E.A., Santos, C.R., Morao, L.G., Motta, M.L., Murakami, M.T.
PDB entry 9bwg: Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine and 0.1 mM zinc in a desensitized state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-05-21
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bwh: Crystal structure of cellulose oxidative enzyme with glycerol
Classification: OXIDOREDUCTASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-05-21
Authors: Morais, M.A.B., Santos, C.A., Araujo, E.A., Santos, C.R., Morao, L.G., Motta, M.L., Murakami, M.T.
PDB entry 9bwi: Crystal structure of cellulose oxidative enzyme in acidic pH with glycerol
Classification: OXIDOREDUCTASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-05-21
Authors: Morais, M.A.B., Santos, C.A., Araujo, E.A., Santos, C.R., Morao, L.G., Motta, M.L., Murakami, M.T.
PDB entry 9bwj: Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine and 0.1 mM zinc in an apo state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2024-05-21
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bwk: Crystal structure of polyketoacyl-CoA thiolase from Burkholderia sp.
Classification: LYASE
Source organism: Burkholderia sp. RF2-non_BP3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-05-21
Authors: Pereira, J.H., Wang, Z., Keasling, J.D., Adams, P.D.
PDB entry 9bwl: Crystal structure of polyketoacyl-CoA thiolase from Burkholderia sp in complex with butyryl-coA
Classification: LYASE
Source organism: Burkholderia sp. RF2-non_BP3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-21
Authors: Pereira, J.H., Wang, Z., Keasling, J.D., Adams, P.D.
PDB entry 9bwm: Neutron Structure of Oxidized Tyr34Phe MnSOD
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: NEUTRON DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-05-21
Authors: Azadmanesh, J., Slobodnik, K., Struble, L.R., Cone, E.A., Dasgupta, M., Lutz, W.E., Kumar, S., Natarajan, A., Coates, L., Weiss, K.L., Myles, D.A.A., Kroll, T., Borgstahl, G.E.O.
PDB entry 9bwn: Nanoparticle Crystal Structure of a Thermostabilized Mutant Rv1498A Flavoprotein from Mycobacterium tuberculosis
Classification: FLAVOPROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2024-05-21
Authors: Seraj, N., Cappelli, L., Wahome, N., Cinelli, P., Fabiola, G., Cartocci, E., Delany, I., Cozzi, R.
PDB entry 9bwo: Crystal structure of polyketoacyl-CoA thiolase from Burkholderia sp. in complex with acetyl-coA
Classification: LYASE
Source organism: Burkholderia sp. RF2-non_BP3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2024-05-21
Authors: Pereira, J.H., Wang, Z., Keasling, J.D., Adams, P.D.
PDB entry 9bwp: Crystal structure of polyketoacyl-CoA thiolase from Burkholderia sp. in complex with acetoacetyl-coA
Classification: LYASE
Source organism: Burkholderia sp. RF2-non_BP3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-05-21
Authors: Pereira, J.H., Wang, Z., Keasling, J.D., Adams, P.D.
PDB entry 9bwq: X-ray Counterpart to the Neutron Structure of Peroxide-Soaked Tyr34Phe MnSOD
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-05-21
Authors: Azadmanesh, J., Slobodnik, K., Struble, L.R., Cone, E.A., Dasgupta, M., Lutz, W.E., Kumar, S., Natarajan, A., Coates, L., Weiss, K.L., Myles, D.A.A., Kroll, T., Borgstahl, G.E.O.
PDB entry 9bwr: X-ray Counterpart to the Neutron Structure of Reduced Tyr34Phe MnSOD
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-05-21
Authors: Azadmanesh, J., Slobodnik, K., Struble, L.R., Cone, E.A., Dasgupta, M., Lutz, W.E., Kumar, S., Natarajan, A., Coates, L., Weiss, K.L., Myles, D.A.A., Kroll, T., Borgstahl, G.E.O.
PDB entry 9bws: Structure of human k2P13.1 (THIK-1) S136P Y273A in lipid nanodisc
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2024-05-21
Authors: Roy-Chowdhury, S., Minor, D.L.
PDB entry 9bwt: human sodium chloride cotransporter NCC S344E in the phosphorylation state and in complex with hydrochlorothiazide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-21
Authors: Cao, E.H., Zhao, Y.X.
PDB entry 9bwu: Glutarate L-2-hydroxylase (CsiD/GlaH) from Escherichia coli at 2.20 Angstroms Resolution
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-05-21
Authors: Han, Z.
PDB entry 9bwv: Structure of influenza D RNP, 4xNP local resconstruction
Classification: VIRAL PROTEIN/RNA
Source organism: Influenza D virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.1 Å
Deposited: 2024-05-22
Authors: Peng, R., Chang, Y.-W.
PDB entry 9bwx: Consensus full-complex model for preturnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2024-05-22
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bwz: Structure of influenza A RNP, 4xNP local reconstruction, class 3
Classification: VIRAL PROTEIN/RNA
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.2 Å
Deposited: 2024-05-22
Authors: Peng, R., Chang, Y.-W.
PDB entry 9bx0: Structure of influenza A RNP, 4xNP local reconstruction, class 4
Classification: VIRAL PROTEIN/RNA
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.2 Å
Deposited: 2024-05-22
Authors: Peng, R., Chang, Y.-W.
PDB entry 9bx1: Structure of influenza A RNP, 4xNP local reconstruction, class 5
Classification: VIRAL PROTEIN/RNA
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2024-05-22
Authors: Peng, R., Chang, Y.-W.
PDB entry 9bx2: Class 2 model for preturnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2024-05-22
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bx3: Class 5 model for preturnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-05-22
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bx4: Structure of influenza A RNP, 4xNP local reconstruction, class 6
Classification: VIRAL PROTEIN/RNA
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.2 Å
Deposited: 2024-05-22
Authors: Peng, R., Chang, Y.-W.
PDB entry 9bx5: Human Fab 8C1 in complex with OspCA peptide P4 (residues 141-144)
Classification: IMMUNE SYSTEM
Source organism: Borreliella burgdorferi; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-05-22
Authors: Rudolph, M.J., Mantis, N.
PDB entry 9bx6: Class 9 model for preturnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-05-22
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bx7: Fab 8C1 in complex with OspCA peptide P20 (residues 131-150)
Classification: IMMUNE SYSTEM/ANTIGEN
Source organism: Borreliella burgdorferi; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-22
Authors: Rudolph, M.J., Mantis, N.
PDB entry 9bx8: Class 12 model for preturnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2024-05-22
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bx9: Class 15 model for preturnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2024-05-22
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bxa: Structure of Mnx H340A complex from Bacillus sp. PL-12
Classification: METAL TRANSPORT
Source organism: Bacillus sp. (in: firmicutes)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-05-22
Authors: Novikova, I.V., Evans, J.E.
PDB entry 9bxb: CRYSTAL STRUCTURE OF HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH DL-III-14
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-22
Authors: Niu, L., Tolbert, W.D., Pazgier, M.
PDB entry 9bxc: Consensus model for pre-reduction condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2024-05-22
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bxd: CRYSTAL STRUCTURE OF HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH HZ-IV-188
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-05-22
Authors: Niu, L., Tolbert, W.D., Pazgier, M.
PDB entry 9bxe: Major Conformation of the Internal Loop 5'GGAGUC/3'CUGAGG
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2024-05-22
Authors: Kennedy, S.D., Mathews, D.H., Akinyemi, O.
PDB entry 9bxf: CRYSTAL STRUCTURE OF HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH HZ-IV-236
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2024-05-22
Authors: Niu, L., Tolbert, W.D., Pazgier, M.
PDB entry 9bxg: CRYSTAL STRUCTURE OF HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH HZ-IV-242
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-05-22
Authors: Tolbert, W.D., Niu, L., Pazgier, M.
PDB entry 9bxh: OvsM from Marinimicrobium koreense, a SAM-dependent N-methyltransferase involved in ovoselenol biosynthesis
Classification: TRANSFERASE
Source organism: Marinimicrobium koreense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2024-05-22
Authors: Ireland, K.A., Davis, K.M.
PDB entry 9bxi: Paired Helical Filament of tau amyloids found in Down Syndrome individuals
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-05-22
Authors: Tse, E., Ghosh, U., Condello, C., Southworth, D.
PDB entry 9bxj: OvsM from Marinimicrobium koreense, an ovoselenol-biosynthetic N-methyltransferase in complex with SAM
Classification: TRANSFERASE
Source organism: Marinimicrobium koreense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-05-22
Authors: Ireland, K.A., Davis, K.M.
PDB entry 9bxk: OvsM from Marinimicrobium koreense, an ovoselenol-biosynthetic N-methyltransferase in complex with 5-selenohistidine and SAH
Classification: TRANSFERASE
Source organism: Marinimicrobium koreense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-05-22
Authors: Ireland, K.A., Davis, K.M.
PDB entry 9bxl: OvoM from Sulfuricurvum sp. isolate STB_99, an ovothiol-biosynthetic N-methyltransferase in complex with SAM
Classification: TRANSFERASE
Source organism: Sulfuricurvum sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-05-22
Authors: Ireland, K.A., Davis, K.M.
PDB entry 9bxm: OvoM from Sulfuricurvum sp. isolate STB_99, a SAM-dependent N-methyltransferase involved in ovothiol biosynthesis
Classification: TRANSFERASE
Source organism: Sulfuricurvum sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2024-05-22
Authors: Ireland, K.A., Davis, K.M.
PDB entry 9bxn: OvoM from Sulfuricurvum sp. isolate STB_99, an ovothiol-biosynthetic N-methyltransferase in complex with 5-thiohistidine and SAH
Classification: TRANSFERASE
Source organism: Sulfuricurvum sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-22
Authors: Ireland, K.A., Davis, K.M.
PDB entry 9bxo: Straight Filament of tau amyloids found in Down Syndrome individuals
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-22
Authors: Tse, E., Ghosh, U., Condello, C., Southworth, D.
PDB entry 9bxp: Nanoparticle Crystal Structure of a Thermostabilized Mutant of an As-Isolated FtnA (Ferritin) from Pseudomonas aeruginosa
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2024-05-22
Authors: Seraj, N., Cappelli, L., Wahome, N., Cinelli, P., Fabiola, G., Cartocci, E., Delany, I., Cozzi, R.
PDB entry 9bxq: Paired Helical Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-22
Authors: Tse, E., Ghosh, U., Condello, C., Southworth, D.
PDB entry 9bxr: Straight Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-05-22
Authors: Tse, E., Ghosh, U., Condello, C., Southworth, D.
PDB entry 9bxs: Consensus full-complex model for pre-reduction condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-05-22
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bxt: TrxA focus-classified model for pre-reduction condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-05-22
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bxu: Cryo-EM structure of ATP synthase DP state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-22
Authors: Zhang, Z., Maharjan, R., Tringides, M.
PDB entry 9bxv: Respiratory supercomplex I III
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-22
Authors: Zhang, Z., Maharjan, R., Tringides, M.
PDB entry 9bxw: CRYSTAL STRUCTURE OF HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH DL-III-115
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-23
Authors: Tolbert, W.D., Niu, L., Pazgier, M.
PDB entry 9bxx: Class 11 model for pre-reduction condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.26 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bxy: CRYSTAL STRUCTURE OF HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH DL-III-117
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-05-23
Authors: Tolbert, W.D., Niu, L., Pazgier, M.
PDB entry 9bxz: Class 15 model for pre-reduction condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.11 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9by0: Class 16 model for pre-reduction condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.19 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9by1: Consensus model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9by2: Consensus full-complex model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9by3: Class 3 model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9by4: Co-crystal structure of the kinase domain of EGFR with non-covalent osimertinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.307 Å
Deposited: 2024-05-23
Authors: Ashtekar, K.D., Stayrook, S.E., Lemmon, M.A.
PDB entry 9by5: Crystal Structure of RT-PhyR (ruthe_01174)
Classification: SIGNALING PROTEIN
Source organism: Rubellimicrobium thermophilum DSM 16684
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-05-23
Authors: Swingle, D., Isiorho, E.A., Gardner, K.H.
PDB entry 9by6: Crystal structure of the kinase domain of EGFR soaked with non-covalent osimertinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.551 Å
Deposited: 2024-05-23
Authors: Ashtekar, K.D., Stayrook, S.E., Lemmon, M.A.
PDB entry 9by7: Class 8 model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9by8: Class 9 model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9by9: Class 10 model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.14 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bya: Class 11 model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.01 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9byb: Cryo-EM structure of the magnesium transporter MgtA in the E2 conformation with bound lipids and Mg2+
Classification: METAL TRANSPORT
Source organism: Lactococcus lactis subsp. lactis CV56
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-05-23
Authors: Khan, M.B., Primeau, J.O., Young, H.S.
PDB entry 9byc: Class 12 model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9byd: Class 16 model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bye: Nanoparticle Crystal Structure of a Thermostabilized Mutant E.coli Ferritin ECFTNA
Classification: FLAVOPROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-05-23
Authors: Seraj, N., Cappelli, L., Wahome, N., Cinelli, P., Fabiola, G., Cartocci, E., Harshbarger, W., Delany, I., Cozzi, R.
PDB entry 9byf: Fab 212-55 in complex with OspA
Classification: IMMUNE SYSTEM/ANTIGEN
Source organism: Borreliella burgdorferi; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-05-23
Authors: Rudolph, M.J., Mantis, N.
PDB entry 9byg: Class 19 model for product condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9byh: Consensus model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9byi: Structure of human K2P13.1 (THIK1) in detergent
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-05-23
Authors: Roy-Chowdhury, S., Minor, D.L.
PDB entry 9byj: Crystal Structure of Hck in complex with the Src-family kinase inhibitor A-419259
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-23
Authors: Selzer, A.M., Alvarado, J.J., Smithgall, T.E.
PDB entry 9byk: Cryo-EM structure of ATP synthase E state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2024-05-23
Authors: Zhang, Z., Maharjan, R., Tringides, M.
PDB entry 9byl: Consensus full-complex model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2024-05-23
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bym: Cryo-EM structure of ATP synthase non-stator state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-05-23
Authors: Zhang, Z., Maharjan, R., Tringides, M.
PDB entry 9byn: Cryo-EM structure of amyloid fibril extracted from nerve of a variant ATTR V30M amyloidosis patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-05-23
Authors: Nguyen, A.B., Afrin, S., Yakubovska, A., Saelices, L.
PDB entry 9byo: Cryo-EM structure of glucagon-like peptide-1 receptor (GLP-1R)-Gs complex with Exendin-asp3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2024-05-24
Authors: Zhang, X., Johnson, R., Belousoff, M.J., Danev, R., Sexton, P.M., Wootten, D.
PDB entry 9byp: Single subunit of Epstein-Barr virus annealase BALF2 ssDNA-annealing complex
Classification: RECOMBINATION
Source organism: human gammaherpesvirus 4; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-05-24
Authors: Nicholls, J., Tolun, G., Brewster, J.
PDB entry 9byq: Two-subunit asymmetric unit of Epstein-Barr virus annealase BALF2 ssDNA-annealing complex
Classification: RECOMBINATION
Source organism: human gammaherpesvirus 4; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-05-24
Authors: Nicholls, J., Tolun, G., Brewster, J.
PDB entry 9byr: Filamentous Epstein-Barr virus annealase BALF2 ssDNA-annealing complex
Classification: RECOMBINATION/DNA
Source organism: human gammaherpesvirus 4; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.75 Å
Deposited: 2024-05-24
Authors: Nicholls, J., Tolun, G., Brewster, J.
PDB entry 9bys: Structure of human MAIT BV28 TCR in complex with human MR1-5-OP-RU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-05-24
Authors: Awad, W., Rossjohn, J.
PDB entry 9byt: Class 1 model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9byu: Structure and stability of an apo thermophilic esterase that hydrolyzes polyhydroxybutyrate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Lihuaxuella thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-05-24
Authors: Thomas, G.M., Quirk, S., Huard, D.J.E., Lieberman, R.L.
PDB entry 9byv: Class 4 model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.83 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9byw: Class 5 model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.64 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9byx: Class 8 model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9byy: Class 9 model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9byz: Class 12 model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bz0: Structure of an STK19-containing TC-NER complex
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.9 Å
Deposited: 2024-05-24
Authors: Mevissen, T.E.T., Kuemmecke, M., Farnung, L., Walter, J.C.
PDB entry 9bz1: Cocrystal structure of Clostridium beijerinckii ZTP riboswitch with AICA
Classification: RNA
Source organism: Clostridium beijerinckii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-24
Authors: Jones, C.J., Ferre D'Amare, A.R., Tran, B.
PDB entry 9bz2: Class 14 model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.83 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bz3: Class 17 model for turnover condition of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.01 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bz4: Crystal structure of the C2 and GAP domains of human p120RasGAP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-05-24
Authors: Paul, M.E., Boggon, T.J.
PDB entry 9bz5: Class 6 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bz6: Class 7 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bz7: Pannexin 1 lacking C-terminal activating domain
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-24
Authors: Ehrlich, J.J., Kawate, T.
PDB entry 9bz8: Pannexin 1 containing C-terminal activating domain
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-24
Authors: Ehrlich, J.J., Kawate, T.
PDB entry 9bz9: Class 15 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.64 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bza: Class 18 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bzb: Crystal structure of metallo-hydrolase-like_MBL-fold protein from Salmonella typhimurium LT2
Classification: HYDROLASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-05-24
Authors: Kim, Y., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9bzc: Cocrystal structure of Clostridium beijerinckii ZTP riboswitch with ZMP and Cs
Classification: RNA
Source organism: Clostridium beijerinckii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2024-05-24
Authors: Jones, C.P., Ferre-D'Amare, A.R.
PDB entry 9bzd: Class 23 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.82 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bze: Class 26 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.19 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bzf: Class 28 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bzg: Targeting N-Myc in Neuroblastoma with Selective Aurora Kinase A Degraders
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-24
Authors: Baker, Z.D., Tang, J., Shi, K., Aihara, H., Levinson, N.M., Harki, D.A.
PDB entry 9bzh: Class 29 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.9 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bzi: Class 31 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.99 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bzj: Class 40 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.12 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bzk: Class 43 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.19 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bzl: Targeting N-Myc in Neuroblastoma with Selective Aurora Kinase A Degraders
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-05-24
Authors: Baker, Z.D., Tang, J., Shi, K., Aihara, H., Levinson, N.M., Harki, D.A.
PDB entry 9bzm: Class 45 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.19 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bzn: High resolution structure of class A Beta-lactamase from Bordetella bronchiseptica RB50
Classification: HYDROLASE
Source organism: Bordetella bronchiseptica RB50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2024-05-24
Authors: Maltseva, N., Kim, Y., Endres, M., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9bzo: Class 50 model for combined refinement of Bacillus subtilis ribonucleotide reductase complex
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.48 Å
Deposited: 2024-05-24
Authors: Xu, D., Thomas, W.C., Burnim, A.A., Ando, N.
PDB entry 9bzp: Homomeric alpha3 glycine receptor in the presence of 0.1 millimolar glycine and 1 micromolar zinc in a desensitized state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-05-24
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bzq: Structure of Class A Beta-lactamase from Bordetella bronchiseptica RB50 in a complex with Avibactam
Classification: HYDROLASE
Source organism: Bordetella bronchiseptica RB50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-05-24
Authors: Maltseva, N., Kim, Y., Endres, M., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9bzr: Structure of Class A Beta-lactamase from Bordetella bronchiseptica RB50 in a complex with clavulonate
Classification: HYDROLASE
Source organism: Bordetella bronchiseptica RB50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-05-24
Authors: Maltseva, N., Kim, Y., Endres, M., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9bzs: Cryo-EM structure of cardiac amyloid fibril from a variant ATTR V30M amyloidosis patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-05-24
Authors: Nguyen, A.B., Afrin, S., Yakubovska, A., Saelices, L.
PDB entry 9bzt: UIC-1 bound to benzene
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.82 Å
Deposited: 2024-05-24
Authors: Heinz-Kunert, S.L.
PDB entry 9bzu: UIC-1 peptide with toluene bound
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.92 Å
Deposited: 2024-05-24
Authors: Heinz-Kunert, S.L.
PDB entry 9bzv: UIC-1 bound to isopropylbenzene
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.8 Å
Deposited: 2024-05-24
Authors: Heinz-Kunert, S.L.
PDB entry 9bzw: UIC-1 peptide soaked in p-xylene
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2024-05-24
Authors: Heinz-Kunert, S.L.
PDB entry 9bzx: UIC-1 peptide bound with o-xylene
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2024-05-24
Authors: Heinz-Kunert, S.L.