LiteFold/PDB huggingface dataset:
PDB entry 7zzr: HDAC2 in complex with inhibitory ligand
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.168 Å
Deposited: 2022-05-26
Authors: Cleasby, A., Tisi, D.
PDB entry 7zzs: HDAC2 complexed with an inhibitory ligand
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-05-26
Authors: Cleasby, A., Tisi, D.
PDB entry 7zzt: Ligand binding to HDAC2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-05-26
Authors: Cleasby, A., Tisi, D.
PDB entry 7zzu: Inhibitory Ligand binding to HDAC2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-05-26
Authors: Cleasby, A., Tisi, D.
PDB entry 7zzv: Prostatic acid phosphatase (PAP) fragment (85-120)
Classification: PROTEIN FIBRIL
Experimental method: SOLUTION NMR
Deposited: 2022-05-26
Authors: Blokhin, D.S., Yulmetov, A.R., Kusova, A.M., Skvortsova, P.V.
PDB entry 7zzw: Ligand binding to HDAC2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-05-26
Authors: Cleasby, A., Tisi, D.
PDB entry 7zzx: Crystal structure of Candida auris DHFR in apo form
Classification: HYDROLASE
Source organism: [Candida] auris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-05-26
Authors: Kirkman, T.J., Dias, M.V.B.
PDB entry 7zzy: Solution BcsD structure
Classification: STRUCTURAL PROTEIN
Source organism: Komagataeibacter hansenii ATCC 23769
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-05-26
Authors: Krasteva, P.V., Abidi, W., Decossas, M.
PDB entry 7zzz: Bacteriophage phiCjT23 capsid
Classification: VIRUS
Source organism: Flavobacterium phage; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-05-26
Authors: Rissanen, I., Kejzar, N., Huiskonen, J.T.
PDB entry 821p: THREE-DIMENSIONAL STRUCTURES AND PROPERTIES OF A TRANSFORMING AND A NONTRANSFORMING GLYCINE-12 MUTANT OF P21H-RAS
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 1993-03-29
Authors: Scheidig, A.J., Krengel, U., Pai, E.F., Kabsch, W., Wittinghofer, A., Goody, R.S.
PDB entry 830c: COLLAGENASE-3 (MMP-13) COMPLEXED TO A SULPHONE-BASED HYDROXAMIC ACID
Classification: MATRIX METALLOPROTEASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 1998-08-06
Authors: Lovejoy, B., Welch, A., Carr, S., Luong, C., Broka, C., Hendricks, R.T., Campbell, J., Walker, K., Martin, R., Van Wart, H., Browner, M.F.
PDB entry 8a00: Infectious mouse-adapted ME7 scrapie prion fibril purified from terminally-infected mouse brains
Classification: PROTEIN FIBRIL
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-05-26
Authors: Manka, S.W., Wenborn, A., Betts, J., Joiner, S., Saibil, H.R., Collinge, J., Wadsworth, J.D.F.
PDB entry 8a01: Bacteriophage phiCjT23 major capsid protein trimer type 1
Classification: VIRUS
Source organism: Flavobacterium phage
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-26
Authors: Rissanen, I., Kejzar, N., Huiskonen, J.T.
PDB entry 8a02: Bacteriophage phiCjT23 major capsid protein trimer type 2
Classification: VIRUS
Source organism: Flavobacterium phage
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-26
Authors: Rissanen, I., Kejzar, N., Huiskonen, J.T.
PDB entry 8a03: Bacteriophage phiCjT23 major capsid protein trimer type 3
Classification: VIRUS
Source organism: Flavobacterium phage
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-26
Authors: Rissanen, I., Kejzar, N., Huiskonen, J.T.
PDB entry 8a04: Bacteriophage phiCjT23 major capsid protein trimer type 4
Classification: VIRUS
Source organism: Flavobacterium phage
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-26
Authors: Rissanen, I., Kejzar, N., Huiskonen, J.T.
PDB entry 8a05: Bacteriophage phiCjT23 spike protein penton domain
Classification: VIRUS
Source organism: Flavobacterium phage; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-05-26
Authors: Rissanen, I., Huiskonen, J.T.
PDB entry 8a06: Flavobacterium infecting lipid-containing phage FLiP penton protein
Classification: VIRUS
Source organism: Flavobacterium phage FLiP
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-05-26
Authors: Rissanen, I., Huiskonen, J.T.
PDB entry 8a07: MTH1 in complex with TH001969
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-05-26
Authors: Scaletti, E.R., Narwal, M., Stenmark, P.
PDB entry 8a08: Crystal structure of poplar glutathione transferase U20 in complex with glutathione
Classification: TRANSFERASE
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.645 Å
Deposited: 2022-05-27
Authors: Didierjean, C., Favier, F.
PDB entry 8a09: A hexameric barrel state of a de novo coiled-coil assembly: CC-Type2-(QgLaId)4
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-05-27
Authors: Martin, F.J.O., Rhys, G.G., Dawson, W.M., Woolfson, D.N.
PDB entry 8a0a: Bacillus subtilis SPbeta prophage master regulator MrpR
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-05-27
Authors: Czech, L., Bange, G.
PDB entry 8a0b: Inhibitor binding to HDAC2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.746 Å
Deposited: 2022-05-27
Authors: Cleasby, A., Tisi, D.
PDB entry 8a0c: Capsular polysaccharide synthesis multienzyme in complex with CMP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-05-27
Authors: Cifuente, J.O., Schulze, J., Bethe, A., Di Domenico, V., Litschko, C., Budde, I., Eidenberger, L., Thiesler, H., Ramon-Roth, I., Berger, M., Claus, H., DAngelo, C., Marina, A., Gerardy-Schahn, R., Schubert, M., Guerin, M.E., Fiebig, T.
PDB entry 8a0d: Crystal structure of the major guinea pig allergen Cav p 1.0101 part of the lipocalin family
Classification: ALLERGEN
Source organism: Cavia porcellus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.685 Å
Deposited: 2022-05-27
Authors: Herman, R., Charlier, P., Janssen-Weets, B., Hilger, C., Swiontek, K.
PDB entry 8a0e: CryoEM structure of DHS-eIF5A1 complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-05-27
Authors: Wator, E., Wilk, P., Biela, A.P., Rawski, M., Grudnik, P.
PDB entry 8a0f: Crystal structure of human deoxyhypusine synthase variant K329A in complex with NAD and SPD
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2022-05-27
Authors: Wator, E., Wilk, P., Grudnik, P.
PDB entry 8a0g: Human deoxyhypusine synthase with trapped transition state
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2022-05-27
Authors: Wator, E., Wilk, P., Grudnik, P.
PDB entry 8a0h: Crystal structure of the E25A mutant of the Orange Carotenoid Protein X from Gloeobacter kilaueensis JS1 complexed with echinenone
Classification: TRANSPORT PROTEIN
Source organism: Gloeobacter kilaueensis JS1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-05-27
Authors: Boyko, K.M., Slonimskiy, Y.B., Zupnik, A.O., Varfolomeeva, L.A., Maksimov, E.G., Sluchanko, N.N.
PDB entry 8a0i: Crystal structure of poplar glutathione transferase U20 in complex with glutathionylphenylacetophenone
Classification: TRANSFERASE
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.624 Å
Deposited: 2022-05-27
Authors: Didierjean, C., Favier, F.
PDB entry 8a0j: Crystal structure of the kinetoplastid kinetochore protein Trypanosoma congolense KKT2 divergent polo-box domain
Classification: CELL CYCLE
Source organism: Trypanosoma congolense IL3000
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-05-27
Authors: Ishii, M., Ludzia, P., Marciano, G., Allen, W., Nerusheva, O., Akiyoshi, B.
PDB entry 8a0k: crystal structure of the kinetoplastid kinetochore protein Trypanosoma brucei KKT3 Divergent Polo-Box domain
Classification: CELL CYCLE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2022-05-27
Authors: Ishii, M., Ludzia, P., Marciano, G., Allen, W., Nerusheva, O.O., Akiyoshi, B.
PDB entry 8a0l: Tubulin-CW1-complex
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9981 Å
Deposited: 2022-05-28
Authors: Prota, A.E., Diaz, J.F., Steinmetz, M.O., Oliva, M.A.
PDB entry 8a0m: Capsular polysaccharide synthesis multienzyme in complex with capsular polymer fragment
Classification: BIOSYNTHETIC PROTEIN
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2022-05-29
Authors: Cifuente, J.O., Schulze, J., Bethe, A., Di Domenico, V., Litschko, C., Budde, I., Eidenberger, L., Thiesler, H., Ramon-Roth, I., Berger, M., Claus, H., DAngelo, C., Marina, A., Gerardy-Schahn, R., Schubert, M., Guerin, M.E., Fiebig, T.
PDB entry 8a0n: Crystal structure of Candida auris dihydrofolate reductase complexed with NADPH
Classification: HYDROLASE
Source organism: [Candida] auris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-05-29
Authors: Kirkman, T.K., Dias, M.V.B.
PDB entry 8a0o: Crystal structure of poplar glutathione transferase U20 in complex with galangin
Classification: TRANSFERASE
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.837 Å
Deposited: 2022-05-29
Authors: Didierjean, C., Favier, F.
PDB entry 8a0p: Crystal structure of poplar glutathione transferase U20 in complex with morin
Classification: TRANSFERASE
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.686 Å
Deposited: 2022-05-30
Authors: Didierjean, C., Favier, F.
PDB entry 8a0q: Crystal structure of poplar glutathione transferase U20 in complex with baicalein
Classification: TRANSFERASE
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.048 Å
Deposited: 2022-05-30
Authors: Didierjean, C., Favier, F.
PDB entry 8a0r: Crystal structure of poplar glutathione transferase U20 in complex with pinocembrin
Classification: TRANSFERASE
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-05-30
Authors: Didierjean, C., Favier, F.
PDB entry 8a0s: MTH1 in complex with TH013350
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-05-30
Authors: Liu, H., Scaletti, E., Stenmark, P.
PDB entry 8a0t: MTH1 in complex with TH012532
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-05-30
Authors: Scaletti, E., Stenmark, P.
PDB entry 8a0u: Crystal structure of TEAD3 in complex with CPD4
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.895 Å
Deposited: 2022-05-30
Authors: Scheufler, C., Kallen, J.
PDB entry 8a0v: Crystal structure of TEAD3 in complex with CPD2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.699 Å
Deposited: 2022-05-30
Authors: Scheufler, C., Kallen, J.
PDB entry 8a0w: Crystal structure of the HigA2 antitoxin in complex with operator DNA
Classification: DNA BINDING PROTEIN
Source organism: Vibrio cholerae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.334 Å
Deposited: 2022-05-30
Authors: Hadzi, S., Loris, R.
PDB entry 8a0x: Crystal structure of the HigB2-HigA2 tetramer in complex with operator DNA
Classification: DNA BINDING PROTEIN
Source organism: Vibrio cholerae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.296 Å
Deposited: 2022-05-30
Authors: Hadzi, S., Loris, R.
PDB entry 8a0y: Crystal structure of mouse contactin 2 immunoglobulin domains
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2022-05-30
Authors: Chataigner, L.M.P., Janssen, B.J.C.
PDB entry 8a0z: Crystal structure of Candida auris dihydrofolate reductase complexed with NADPH and pyrimethamine
Classification: HYDROLASE
Source organism: [Candida] auris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-05-30
Authors: Kirkman, T.K., Dias, M.V.B.
PDB entry 8a10: Crystal Structure of human Brachyury G177D variant in complex with Molpolrt-020-049-143
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-05-30
Authors: Newman, J.A., Gavard, A., Aitkenhead, H., Imprachim, N., Sherestha, L., Burgess-Brown, N.A., von Delft, F., Bountra, C., Gileadi, O.
PDB entry 8a11: Cryo-EM structure of the Human SHMT1-RNA complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2022-05-30
Authors: Spizzichino, S., Marabelli, C., Bharadwaj, A., Jakobi, A.J., Chaves-Sanjuan, A., Giardina, G., Bolognesi, M., Cutruzzola, F.
PDB entry 8a12: Plasmodium falciparum Myosin A full-length, post-rigor state complexed to Mg.ATP-gamma-S
Classification: MOTOR PROTEIN
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2022-05-31
Authors: Moussaoui, D., Robblee, J.P., Auguin, D., Fisher, F., Fagnant, P.M., MacFarlane, J.E., Mueller-Dieckmann, C., Baum, J., Robert-Paganin, J., Trybus, K.M., Houdusse, A.
PDB entry 8a14: Crystal structure of the cerato-platanin-like protein Cpl1 from Ustilago maydis
Classification: SUGAR BINDING PROTEIN
Source organism: Ustilago maydis 521
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-05-31
Authors: Weiland, P., Bange, G., Altegoer, F.
PDB entry 8a15: Crystal Structure of Unlinked NS2B-NS3 Protease from Zika Virus in Complex with Inhibitor MI-2230
Classification: VIRAL PROTEIN
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2022-05-31
Authors: Huber, S., Steinmetzer, T.
PDB entry 8a16: Human PTPRM domains FN3-4, in spacegroup P212121
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2022-05-31
Authors: Caroe, E., Graham, S.C., Sharpe, H.J., Deane, J.E.
PDB entry 8a17: Human PTPRM domains FN3-4, in spacegroup P3221
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2022-05-31
Authors: Shamin, M., Graham, S.C., Sharpe, H.J., Deane, J.E.
PDB entry 8a18: 1.63 A resolution hydroquinone inhibited Sporosarcina pasteurii urease
Classification: HYDROLASE
Source organism: Sporosarcina pasteurii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-06-01
Authors: Mazzei, L., Ciurli, S., Cianci, M.
PDB entry 8a19: Structure of a leucinostatin derivative determined by host lattice display : L1E4V1 construct
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.358 Å
Deposited: 2022-06-01
Authors: Mittl, P.R.E.
PDB entry 8a1a: Structure of a leucinostatin derivative determined by host lattice display : L1F11V1 construct
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-06-01
Authors: Mittl, P.R.E.
PDB entry 8a1b: TraI trans-esterase domain from pKM101 (apo)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-06-01
Authors: Breidenstein, A., Berntsson, R.P.-A.
PDB entry 8a1c: TraI trans-esterase domain from pKM101 (DNA bound)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-01
Authors: Breidenstein, A., Berntsson, R.P.-A.
PDB entry 8a1d: Structure of murine perforin-2 (Mpeg1) pore in ring form
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-06-01
Authors: Yu, X., Ni, T., Zhang, P., Gilbert, R.
PDB entry 8a1e: Rabies virus glycoprotein in complex with Fab fragments of 17C7 and 1112-1 neutralizing antibodies
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Mus musculus; Rabies virus strain Pasteur vaccin
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2022-06-01
Authors: Ng, W.M., Fedosyuk, S., English, S., Augusto, G., Berg, A., Thorley, L., Haselon, A.S., Segireddy, R.R., Bowden, T.A., Douglas, A.D.
PDB entry 8a1f: Human PTPRK N-terminal domains MAM-Ig-FN1
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-06-01
Authors: Hay, I.M., Graham, S.C., Sharpe, H.J., Deane, J.E.
PDB entry 8a1g: Structure of the SNX1-SNX5 complex
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-06-01
Authors: Lopez-Robles, C., Scaramuzza, S., Astorga-Simon, E.N., Banos-Mateos, S., Vidaurrazaga, A., Rojas, A.L., Castano, D., Hierro, A.
PDB entry 8a1h: Bacterial 6-4 photolyase from Vibrio cholerase
Classification: DNA BINDING PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-06-01
Authors: Essen, L.-O., Emmerich, H.J.
PDB entry 8a1i: Crystal structure of murine Armc8 isoform beta
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2022-06-01
Authors: van gen Hassend, P.M., Schindelin, H.
PDB entry 8a1j: Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with maleimide analogue 3
Classification: ANTIMICROBIAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-06-01
Authors: de Munnik, M., Lang, P.A., Brem, J., Schofield, C.J.
PDB entry 8a1k: Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with ebsulfur analogue 15
Classification: ANTIMICROBIAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-06-01
Authors: de Munnik, M., Lang, P.A., Brem, J., Schofield, C.J.
PDB entry 8a1l: Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with alpha-chloro ketone 2
Classification: ANTIMICROBIAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-01
Authors: de Munnik, M., Lang, P.A., Brem, J., Schofield, C.J.
PDB entry 8a1m: Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with maleimide analogue 4
Classification: ANTIMICROBIAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-01
Authors: de Munnik, M., Lang, P.A., Brem, J., Schofield, C.J.
PDB entry 8a1n: Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with fumaryl amide analogue 13
Classification: ANTIMICROBIAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-06-01
Authors: de Munnik, M., Lang, P.A., Brem, J., Schofield, C.J.
PDB entry 8a1o: Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with acrylamide analogue 8
Classification: ANTIMICROBIAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-06-01
Authors: de Munnik, M., Lang, P.A., Brem, J., Schofield, C.J.
PDB entry 8a1p: HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor BI-D
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-06-01
Authors: Singer, M.R., Pye, V.E., Cook, N.J., Cherepanov, P.
PDB entry 8a1q: HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor STP0404 (Pirmitegravir)
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2022-06-01
Authors: Singer, M.R., Pye, V.E., Cook, N.J., Cherepanov, P.
PDB entry 8a1r: cryo-EM structure of thioredoxin glutathione reductase in complex with a non-competitive inhibitor
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-06-01
Authors: Ardini, M., Angelucci, F., Fata, F., Gabriele, F., Effantin, G., Ling, W., Williams, D.L., Petukhova, V.Z., Petukhov, P.A.
PDB entry 8a1s: Structure of murine perforin-2 (Mpeg1) pore in twisted form
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-06-02
Authors: Yu, X., Ni, T., Zhang, P., Gilbert, R.
PDB entry 8a1t: Sodium pumping NADH-quinone oxidoreductase
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2022-06-02
Authors: Hau, J.-L., Kaltwasser, S., Vonck, J., Fritz, G., Steuber, J.
PDB entry 8a1u: Sodium pumping NADH-quinone oxidoreductase with substrates NADH and Q2
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2022-06-02
Authors: Hau, J.-L., Kaltwasser, S., Vonck, J., Fritz, G., Steuber, J.
PDB entry 8a1v: Sodium pumping NADH-quinone oxidoreductase with substrate Q2
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2022-06-02
Authors: Hau, J.-L., Kaltwasser, S., Vonck, J., Fritz, G., Steuber, J.
PDB entry 8a1w: Sodium pumping NADH-quinone oxidoreductase with substrate Q1
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2022-06-02
Authors: Hau, J.-L., Kaltwasser, S., Vonck, J., Fritz, G., Steuber, J.
PDB entry 8a1x: Sodium pumping NADH-quinone oxidoreductase with inhibitor DQA
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-06-02
Authors: Hau, J.-L., Kaltwasser, S., Vonck, J., Fritz, G., Steuber, J.
PDB entry 8a1y: Sodium pumping NADH-quinone oxidoreductase with inhibitor HQNO
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-02
Authors: Hau, J.-L., Kaltwasser, S., Vonck, J., Fritz, G., Steuber, J.
PDB entry 8a1z: Crystal structure of Phosphoserine phosphatase SerB from Mycobacterium avium in complex with 1-(2,4-dichlorophenyl)-3-hydroxyurea
Classification: HYDROLASE
Source organism: Mycobacterium avium 104
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2022-06-02
Authors: Haufroid, M., Wouters, J.
PDB entry 8a21: Crystal structure of Phosphoserine phosphatase SerB from Mycobacterium avium in complex with phenylimidazole
Classification: HYDROLASE
Source organism: Mycobacterium avium 104
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-06-02
Authors: Haufroid, M., Wouters, J.
PDB entry 8a22: Structure of the mitochondrial ribosome from Polytomella magna
Classification: RIBOSOME
Source organism: Polytomella magna
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2022-06-02
Authors: Tobiasson, V., Berzina, I., Amunts, A.
PDB entry 8a23: Crystal structure of SARS-CoV-2 nsp10/nsp16 methyltransferase in complex with TO383
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-06-02
Authors: Hanigovsky, M., Krafcikova, P., Klima, M., Boura, E.
PDB entry 8a24: Lysophospholipase PlaA from Legionella pneumophila str. Corby - iodide soak
Classification: HYDROLASE
Source organism: Legionella pneumophila str. Corby
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2022-06-02
Authors: Diwo, M.G., Blankenfeldt, W.
PDB entry 8a25: Lysophospholipase PlaA from Legionella pneumophila str. Corby - complex with PEG fragment
Classification: HYDROLASE
Source organism: Legionella pneumophila str. Corby
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-06-02
Authors: Diwo, M.G., Blankenfeldt, W.
PDB entry 8a26: Lysophospholipase PlaA from Legionella pneumophila str. Corby - complex with palmitate
Classification: HYDROLASE
Source organism: Legionella pneumophila str. Corby
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-06-02
Authors: Diwo, M.G., Blankenfeldt, W.
PDB entry 8a27: EGFR kinase domain in complex with 2-(6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-1-yl)-2-[6-[2-[4-[[4-(hydroxymethyl)-1-piperidyl]methyl]phenyl]ethynyl]-1-oxo-4-(trifluoromethyl)isoindolin-2-yl]-N-thiazol-2-yl-acetamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2022-06-02
Authors: Kuglstatter, A., Ehler, A.
PDB entry 8a28: Structure of the astacin zymogen of LAST-MAM from Limulus polyphemus
Classification: HYDROLASE
Source organism: Limulus polyphemus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-06-02
Authors: Guevara, T., Rodriguez Banqueri, A.
PDB entry 8a29: Apo 1-deoxy-D-xylulose 5-phosphate synthase from Pseudomonas aeruginosa
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa LESB58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-02
Authors: Hamid, R., Adam, S., Lacour, A., Monjas, L., Hirsch, A.
PDB entry 8a2a: EGFR kinase domain in complex with 2-(6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-1-yl)-2-[6-[2-[4-[[4-(hydroxymethyl)-1-piperidyl]methyl]phenyl]ethynyl]-1-oxo-4-(trifluoromethyl)isoindolin-2-yl]-N-thiazol-2-yl-acetamide (form 2)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2022-06-03
Authors: Kuglstatter, A., Ehler, A.
PDB entry 8a2b: EGFR kinase domain (L858R/V948R) in complex with 2-(6,7-dihydro-5H-pyrrolo[1,2-c]imidazol-1-yl)-2-[6-[2-[4-[[4-(hydroxymethyl)-1-piperidyl]methyl]phenyl]ethynyl]-1-oxo-4-(trifluoromethyl)isoindolin-2-yl]-N-thiazol-2-yl-acetamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-06-03
Authors: Kuglstatter, A., Ehler, A.
PDB entry 8a2c: The crystal structure of the S178A mutant of PET40, a PETase enzyme from an unclassified Amycolatopsis
Classification: HYDROLASE
Source organism: unclassified Amycolatopsis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-03
Authors: Costanzi, E., Applegate, V., Port, A., Smits, S.H.J.
PDB entry 8a2d: EGFR kinase domain (L858R/V948R) in complex with 2-[4-(difluoromethyl)-6-[2-[4-[[4-(hydroxymethyl)-1-piperidyl]methyl]phenyl]ethynyl]-7-methyl-indazol-2-yl]-2-spiro[6,7-dihydropyrrolo[1,2-c]imidazole-5,1'-cyclopropane]-1-yl-N-thiazol-2-yl-acetamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2022-06-03
Authors: Kuglstatter, A., Ehler, A.
PDB entry 8a2e: Crystal Structure of Human Parechovirus 3 2A protein
Classification: VIRAL PROTEIN
Source organism: Human parechovirus 3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-06-03
Authors: von Castelmur, E., Zhu, L., wang, X., Fry, E., Ren, J., Perrakis, A., Stuart, D.I.
PDB entry 8a2f: Crystal Structure of Ljunganvirus 1 2A protein
Classification: VIRAL PROTEIN
Source organism: Ljunganvirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-06-03
Authors: von Castelmur, E., Zhu, L., Wang, X., Fry, E., Ren, J., Perrakis, A., Stuart, D.I.
PDB entry 8a2g: Crystal structure of Sebokelevirus 2A2 protein
Classification: VIRAL PROTEIN
Source organism: Sebokele virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-06-03
Authors: Zhu, L., Von Castelmur, E., Whang, X., Ren, J., Fry, E., Perrakis, A., Stuart, D.I.
PDB entry 8a2h: human STING in complex with 2',3'-cyclic-GMP-7-deazaphenyl-AMP
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2022-06-03
Authors: Smola, M., Vavrina, Z., Boura, E., Brynda, J.
PDB entry 8a2i: human STING in complex with 2'-3'-cyclic-GMP-7-deaza(4-(2-naphthyl)phenyl)-AMP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2022-06-03
Authors: Vavrina, Z., Brynda, J., Rezacova, P.
PDB entry 8a2j: human STING in complex with 2'-3'-cyclic-GMP-7-deaza(4-biphenylyl)-AMP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-06-03
Authors: Vavrina, Z., Brynda, J., Rezacova, P.
PDB entry 8a2k: human STING in complex with 2'-3'-cyclic-GMP-7-deaza(4-[(2-naphthyloxy)methyl]phenyl)-AMP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-06-03
Authors: Vavrina, Z., Brynda, J., Rezacova, P.
PDB entry 8a2l: X-ray structure of TRIL-encapsulated human heavy chain ferritin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2022-06-03
Authors: Ferraro, G., Merlino, A.
PDB entry 8a2m: X-ray structure of Ru(bpy)3]2+ complex (Ru1)-encapsulated human heavy chain ferritin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-06-03
Authors: Ferraro, G., Merlino, A.
PDB entry 8a2n: Structure of crocagin biosynthetic protein CgnD
Classification: HYDROLASE
Source organism: Chondromyces crocatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-06-06
Authors: Adam, S., Koehnke, J.
PDB entry 8a2o: Room-temperature structure of the stabilised A2A-Theophylline complex determined by synchrotron serial crystallography
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2022-06-06
Authors: Moraes, I., Kwan, T.O.C., Axford, D.
PDB entry 8a2p: Room-temperature structure of the stabilised A2A-LUAA47070 complex determined by synchrotron serial crystallography
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2022-06-06
Authors: Moraes, I., Kwan, T.O.C., Axford, D.
PDB entry 8a2q: Structure of the DNA-bound FANCD2-FANCI complex containing phosphomimetic FANCI
Classification: DNA BINDING PROTEIN
Source organism: Gallus gallus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2022-06-06
Authors: Passmore, L.A., Sijacki, T., Alcon, P.
PDB entry 8a2r: Cryo-EM structure of F-actin in the Mg2+-ADP-BeF3- nucleotide state.
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.17 Å
Deposited: 2022-06-06
Authors: Oosterheert, W., Klink, B.U., Belyy, A., Pospich, S., Raunser, S.
PDB entry 8a2s: Cryo-EM structure of F-actin in the Mg2+-ADP-Pi nucleotide state.
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2022-06-06
Authors: Oosterheert, W., Klink, B.U., Belyy, A., Pospich, S., Raunser, S.
PDB entry 8a2t: Cryo-EM structure of F-actin in the Mg2+-ADP nucleotide state.
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.24 Å
Deposited: 2022-06-06
Authors: Oosterheert, W., Klink, B.U., Belyy, A., Pospich, S., Raunser, S.
PDB entry 8a2u: Cryo-EM structure of F-actin in the Ca2+-ADP-BeF3- nucleotide state.
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2022-06-06
Authors: Oosterheert, W., Klink, B.U., Belyy, A., Pospich, S., Raunser, S.
PDB entry 8a2v: Room temperature structure of the ground state of AtPhot2LOV2 in space group P43212
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2022-06-06
Authors: Engilberge, S., Caramello, N., Royant, A.
PDB entry 8a2w: Room temperature structure of the ground state of AtPhot2LOV2 in space group P212121, as recovered 1620 seconds after light irradiation
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2022-06-06
Authors: Engilberge, S., Caramello, N., Royant, A.
PDB entry 8a2x: Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP(S)-2'F,2'd<carba>AMP(S))
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-06-06
Authors: Klima, M., Smola, M., Boura, E.
PDB entry 8a2y: Cryo-EM structure of F-actin in the Ca2+-ADP-Pi nucleotide state.
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.15 Å
Deposited: 2022-06-06
Authors: Oosterheert, W., Klink, B.U., Belyy, A., Pospich, S., Raunser, S.
PDB entry 8a2z: Cryo-EM structure of F-actin in the Ca2+-ADP nucleotide state.
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.15 Å
Deposited: 2022-06-06
Authors: Oosterheert, W., Klink, B.U., Belyy, A., Pospich, S., Raunser, S.
PDB entry 8a30: Malonyl-CoA reductase from Chloroflexus aurantiacus - C-terminal Apo
Classification: OXIDOREDUCTASE
Source organism: Chloroflexus aurantiacus J-10-fl
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-06-06
Authors: Kabasakal, B.V., Murray, J.W.
PDB entry 8a31: p53 cancer mutant Y220C in complex with iodophenol-based small-molecule stabilizer JC694
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2022-06-06
Authors: Balourdas, D.I., Stephenson Clarke, J.R., Baud, M.G.J., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8a32: p53 cancer mutant Y220C in complex with iodophenol-based small-molecule stabilizer JC769
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2022-06-06
Authors: Balourdas, D.I., Stephenson Clarke, J.R., Baud, M.G.J., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8a33: Crystal structure of PpSB1-LOV-K117E mutant (light state)
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2022-06-07
Authors: Batra-Safferling, R., Granzin, J., Krauss, U.
PDB entry 8a34: MTH1 in complex with TH013071
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-06-07
Authors: Liu, H., Scaletti, E., Stenmark, P.
PDB entry 8a35: NaK C-DI mutant with Rb+ and Na+
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-06-07
Authors: Minniberger, S., Plested, A.J.R.
PDB entry 8a36: Crystal structure of PpSB1-LOV-K117E mutant (dark state), monoclinic form
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-06-07
Authors: Batra-Safferling, R., Granzin, J.
PDB entry 8a37: Crystal structure of PpSB1-LOV-K117E mutant (dark state), tetragonal form
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2022-06-07
Authors: Batra-Safferling, R., Granzin, J.
PDB entry 8a38: RING domain of human TRIM2
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.196 Å
Deposited: 2022-06-07
Authors: Perez-Borrajero, C., Murciano, B., Hennig, J.
PDB entry 8a39: Crystal Structure of PaaX from Escherichia coli W
Classification: TRANSCRIPTION
Source organism: Escherichia coli W
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-06-07
Authors: Molina, R., Alba-Perez, A., Hermoso, J.A.
PDB entry 8a3a: MTH1 in complex with TH013074
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-06-07
Authors: Liu, H., Scaletti, E., Stenmark, P.
PDB entry 8a3b: Cryo-EM structure of mouse Pannexin 1 purified in Salipro nanoparticles
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-06-07
Authors: Drulyte, I.
PDB entry 8a3c: Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 (insect cell expressed VLPs)
Classification: VIRUS LIKE PARTICLE
Source organism: Nudaurelia capensis omega virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2022-06-08
Authors: Castells-Graells, R., Hesketh, E.L., Johnson, J.E., Ranson, N.A., Lawson, D.M., Lomonossoff, G.P.
PDB entry 8a3d: Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.67 Å
Deposited: 2022-06-08
Authors: Faille, A., Warren, A.J., Dent, K.C.
PDB entry 8a3f: Proline Racemase (ProR) from the Gram-positive bacterium Acetoanaerobium sticklandii from isotropic tetragonal data at 3.15 A
Classification: ISOMERASE
Source organism: Acetoanaerobium sticklandii DSM 519
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2022-06-08
Authors: Najmudin, S., Pan, X.-S., McAuley, K.E., Fisher, L.M., Sanderson, M.R.
PDB entry 8a3g: X-ray crystal structure of a de novo designed antiparallel coiled-coil homotetramer with 4 heptad repeats, apCC-Tet*
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2022-06-08
Authors: Naudin, E.A., Mylemans, B., Albanese, K.I., Woolfson, D.N.
PDB entry 8a3h: Cellobiose-derived imidazole complex of the endoglucanase cel5A from Bacillus agaradhaerens at 0.97 A resolution
Classification: HYDROLASE
Source organism: Bacillus agaradhaerens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 1999-01-20
Authors: Varrot, A., Schulein, M., Pipelier, M., Vasella, A., Davies, G.J.
PDB entry 8a3i: X-ray crystal structure of a de novo designed antiparallel coiled-coil homotetramer with 3 heptad repeats, apCC-Tet*3
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2022-06-08
Authors: Naudin, E.A., Mylemans, B., Albanese, K.I., Woolfson, D.N.
PDB entry 8a3j: X-ray crystal structure of a de novo designed antiparallel coiled-coil heterotetramer with 3 heptad repeats, apCC-Tet*3-A2B2
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-06-08
Authors: Naudin, E.A., Mylemans, B., Albanese, K.I., Woolfson, D.N.
PDB entry 8a3k: X-ray crystal structure of a de novo designed single-chain antiparallel 4-helix coiled-coil bundle, sc-apCC-4
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-08
Authors: Albanese, K.I., Mylemans, B., Naudin, E.A., Woolfson, D.N.
PDB entry 8a3l: Structural insights into the binding of bS1 to the ribosome
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2022-06-08
Authors: D'Urso, G., Chat, S., Gillet, R., Giudice, E.
PDB entry 8a3n: Geissoschizine synthase from Catharanthus roseus - binary complex with NADP+
Classification: OXIDOREDUCTASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-08
Authors: Langley, C., Tatsis, E., Hong, B., Nakamura, Y., Kamileen, M.O., Paetz, C., Stevenson, C.E.M., Basquin, J., Lawson, D.M., Caputi, L., O'Connor, S.E.
PDB entry 8a3o: Structure of human Fy-4
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-06-08
Authors: Schuhmacher, J.S., Zerial, M.
PDB entry 8a3p: Structure of human Fy-5.
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-06-08
Authors: Schuhmacher, J.S., Zerial, M.
PDB entry 8a3q: Human Plasma Kallekrein in complex with 14W
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2022-06-08
Authors: McEwan, P.A.
PDB entry 8a3t: S. cerevisiae APC/C-Cdh1 complex
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-06-09
Authors: Barford, D., Vazquez-Fernandez, E., Zhang, Z., Yang, J.
PDB entry 8a3u: Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (symmetrical variant, trigonal form with short c-axis)
Classification: SIGNALING PROTEIN
Source organism: Bradyrhizobium diazoefficiens USDA 110; Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2022-06-09
Authors: Arinkin, V., Batra-Safferling, R., Granzin, J.
PDB entry 8a3v: Crystal structure of the Vibrio cholerae replicative helicase (VcDnaB) in complex with its loader protein (VcDciA)
Classification: REPLICATION
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-06-09
Authors: Walbott, H., Quevillon-Cheruel, S., Cargemel, C.
PDB entry 8a3w: CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : WILD TYPE
Classification: RIBOSOME
Source organism: Leishmania major strain Friedlin
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2022-06-09
Authors: Rajan, K.S., Yonath, A., Bashan, A.
PDB entry 8a3x: Imine Reductase from Ensifer adhaerens in complex with NADP+
Classification: OXIDOREDUCTASE
Source organism: Ensifer adhaerens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2022-06-09
Authors: Gilio, A.K., Grogan, G.
PDB entry 8a3y: Structure of mammalian Pol II-DSIF-SPT6-PAF1-TFIIS-hexasome elongation complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-06-09
Authors: Farnung, L., Ochmann, M., Garg, G., Vos, S.M., Cramer, P.
PDB entry 8a40: Structure of mammalian Pol II-TFIIS elongation complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-06-09
Authors: Farnung, L., Ochmann, M., Garg, G., Vos, S.M., Cramer, P.
PDB entry 8a41: Nudaurelia capensis omega virus procapsid at pH7.6 (insect cell expressed VLPs)
Classification: VIRUS LIKE PARTICLE
Source organism: Nudaurelia capensis omega virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.88 Å
Deposited: 2022-06-10
Authors: Castells-Graells, R., Hesketh, E.L., Johnson, J.E., Ranson, N.A., Lawson, D.M., Lomonossoff, G.P.
PDB entry 8a42: Crystal structure of the pneumococcal Substrate-binding protein AmiA in complex with an unknown peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Escherichia coli; Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-06-10
Authors: Alcorlo, M., Abdullah, M.R., Hammerschmidt, S., Hermoso, J.
PDB entry 8a43: Human RNA polymerase I
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.09 Å
Deposited: 2022-06-10
Authors: Daiss, J.L., Pilsl, M., Straub, K., Bleckmann, A., Hoecherl, M., Heiss, F.B., Abascal-Palacios, G., Ramsay, E., Tluckova, K., Mars, J.C., Fuertges, T., Bruckmann, A., Rudack, T., Bernecky, C., Lamour, V., Panov, K., Vannini, A., Moss, T., Engel, C.
PDB entry 8a44: Plasmodium vivax Duffy binding protein region II bound the DARC ectodomain and monoclonal antibody DB1
Classification: CELL ADHESION
Source organism: Homo sapiens; Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2022-06-10
Authors: Moskovitz, R., Higgins, M.K.
PDB entry 8a45: Structural analysis of 1-deoxy-D-xylulose 5-phosphate synthase from Pseudomonas aeruginosa with 2-acetyl thiamine diphosphate
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa LESB58
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-06-10
Authors: Hamid, R., Hirsch, A.
PDB entry 8a46: Crystal structure of the human Kelch domain of Keap1 in complex with compound S217879
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.323 Å
Deposited: 2022-06-10
Authors: Weber, C., Vuillard, L., Delerive, P., Miallau, L.
PDB entry 8a47: IdeS in complex with IgG1 Fc
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Streptococcus pyogenes serotype M59
Experimental method: X-RAY DIFFRACTION
Resolution: 2.338 Å
Deposited: 2022-06-10
Authors: Sudol, A.S.L., Tews, I., Crispin, M.
PDB entry 8a48: Less crystallisable"" IgG1 Fc fragment (E382S variant)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.044 Å
Deposited: 2022-06-10
Authors: Sudol, A.S.L., Tews, I., Crispin, M.
PDB entry 8a49: Endoglycosidase S in complex with IgG1 Fc
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Streptococcus pyogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2022-06-10
Authors: Sudol, A.S.L., Tews, I., Crispin, M.
PDB entry 8a4a: Structure of human Rep15 in complex with bovine Rab3C.
Classification: ENDOCYTOSIS
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2022-06-10
Authors: Rai, A., Vetter, I.R., Goody, R.S.
PDB entry 8a4b: Structure of human Rep15:Rab3B_Q81L complex.
Classification: ENDOCYTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-06-10
Authors: Rai, A., Vetter, I.R., Goody, R.S.
PDB entry 8a4c: Structure of human Rep15:Rab3B complex.
Classification: ENDOCYTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-06-10
Authors: Rai, A., Vetter, I.R., Goody, R.S.
PDB entry 8a4d: 1-deoxy-D-xylulose 5-phosphate synthase from Pseudomonas aeruginosa with a thiamine analog inhibitor
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa LESB58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-06-10
Authors: Hamid, R., Hirsch, A.