LiteFold/PDB huggingface dataset:
PDB entry 7v9p: Crystal structure of the lanthipeptide zinc-metallopeptidase EryP from saccharopolyspora erythraea in intermediate state
Classification: HYDROLASE
Source organism: Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-26
Authors: Zhao, C., Zhao, N.L., Bao, R.
PDB entry 7v9q: Crystal structure of the lanthipeptide zinc-metallopeptidase EryP from saccharopolyspora erythraea in open state
Classification: HYDROLASE
Source organism: Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2021-08-26
Authors: Zhao, C., Zhao, N.L., Bao, R.
PDB entry 7v9r: Crystal Structure of the heptameric EcHsp60
Classification: CHAPERONE
Source organism: Epinephelus coioides
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2021-08-26
Authors: Lai, M.C., Lin, S.M.
PDB entry 7v9s: Telomeric trinucleosome in open state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 11 Å
Deposited: 2021-08-26
Authors: Soman, A.
PDB entry 7v9u: Cryo-EM structure of E.coli retron-Ec86 (RT-msDNA-RNA) at 3.2 angstrom
Classification: TRANSFERASE/DNA/RNA
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2021-08-26
Authors: Wang, Y.J., Guan, Z.Y., Zou, T.T.
PDB entry 7v9x: Cryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.8 angstrom
Classification: TRANSFERASE/RNA BINDING PROTEIN/DNA/RNA
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2021-08-27
Authors: Wang, Y.J., Guan, Z.Y., Zou, T.T.
PDB entry 7v9z: PaOrn Oligoribonuclease native structure
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-08-27
Authors: Zhang, J., Zhang, Q., Bartlam, M.
PDB entry 7va1: Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with GDD-04-35
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-08-27
Authors: Cen, Y., Gao, D., Zhou, J., Tian, P.
PDB entry 7va2: PaOrn Oligoribonuclease D11A mutant with product GMP complex structure
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-08-27
Authors: Zhang, J., Zhang, Q., Bartlam, M.
PDB entry 7va3: PaOrn Oligoribonuclease D11A mutant with substrate pGpG complex structure
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-27
Authors: Zhang, J., Zhang, Q., Bartlam, M.
PDB entry 7va4: Telomeric tetranucleosome in open state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 14 Å
Deposited: 2021-08-27
Authors: Soman, A.
PDB entry 7va6: PaOrn Oligoribonuclease D11A mutant with RNA GU complex structure
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-27
Authors: Zhang, J., Zhang, Q., Bartlam, M.
PDB entry 7va8: Crystal structure of MiCGT
Classification: TRANSFERASE
Source organism: Mangifera indica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85003 Å
Deposited: 2021-08-27
Authors: Zhong, L., Zhang, Z.M.
PDB entry 7va9: Rba sphaeroides PufY-KO RC-LH1 dimer type-1
Classification: PHOTOSYNTHESIS
Source organism: Cereibacter sphaeroides 2.4.1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2021-08-27
Authors: Bracun, L., Yamagata, A., Liu, L.N., Shirouzu, M.
PDB entry 7vaa: Crystal structure of MiCGT(W93V/V124F/ F191A/R282H) in complex with UDPs
Classification: TRANSFERASE
Source organism: Mangifera indica
Experimental method: X-RAY DIFFRACTION
Resolution: 3.10003 Å
Deposited: 2021-08-27
Authors: Zhong, L., Zhang, Z.M.
PDB entry 7vab: Cryo-EM structure of the non-acylated tirzepatide (LY3298176)-bound human GIPR-Gs complex
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-28
Authors: Zhao, F.H., Zhou, Q.T., Cong, Z.T., Hang, K.N., Zou, X.Y., Zhang, C., Chen, Y., Dai, A.T., Liang, A.Y., Ming, Q.Q., Wang, M., Chen, L.N., Xu, P.Y., Chang, R.L., Feng, W.B., Xia, T., Zhang, Y., Wu, B.L., Yang, D.H., Zhao, L.H., Xu, H.E., Wang, M.W.
PDB entry 7vac: Crystal structure of antibody 14A in complex with MUC1 glycopeptide(GlycoST)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2021-08-28
Authors: Niu, J., Xu, L., Meng, B., Han, Y.B., Yang, B.
PDB entry 7vad: Cryo-EM structure of human NTCP complexed with YN69202Fab
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2021-08-29
Authors: Asami, J., Shimizu, T., Ohto, U.
PDB entry 7vae: Cryo-EM structure of bovine NTCP complexed with YN69202Fab
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2021-08-29
Authors: Asami, J., Shimizu, T., Ohto, U.
PDB entry 7vaf: Cryo-EM structure of Rat NTCP complexed with YN69202Fab
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2021-08-29
Authors: Asami, J., Shimizu, T., Ohto, U.
PDB entry 7vag: Cryo-EM structure of human NTCP complexed with YN69202Fab in the presence of myristoylated preS1 peptide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2021-08-29
Authors: Asami, J., Shimizu, T., Ohto, U.
PDB entry 7vah: The crystal structure of COVID-19 main protease in H41A mutation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.491 Å
Deposited: 2021-08-29
Authors: Liu, X., Zhao, Y., Yang, H., Rao, Z.
PDB entry 7vai: V1EG of V/A-ATPase from Thermus thermophilus, state1-1
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vaj: Nucleotide-free V1EG domain of V/A-ATPase from Thermus thermophilus, state1-2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vak: Nucleotide-free V1EG domain of V/A-ATPase from Thermus thermophilus, state2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7val: V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state1-1
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vam: V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state1-2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7van: V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state2-1
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vao: V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state2-2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vap: V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state2-2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vaq: V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state3-2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7var: V1EG domain of V/A-ATPase from Thermus thermophilus at low ATP concentration, state1-1
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vas: V1EG domain of V/A-ATPase from Thermus thermophilus at low ATP concentration, state1-2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vat: V1EG of V/A-ATPase from Thermus thermophilus at low ATP concentration, state2-1
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vau: V1EG of V/A-ATPase from Thermus thermophilus at low ATP concentration, state2-2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vav: V1EG of V/A-ATPase from Thermus thermophilus at low ATP concentration, state3
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vaw: V1EG domain of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state1-1
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vax: V1EG of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state1-2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vay: V1EG domain of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state2
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vaz: Crystal structure of antibody 14A in complex with MUC1 glycopeptide(GlycoS)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2021-08-30
Authors: Niu, J., Xu, L., Meng, B., Han, Y.B., Yang, B.
PDB entry 7vb0: V1EG domain of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state3
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-08-30
Authors: Kishikawa, J., Nakanishi, A., Nakano, A., Saeki, S., Furuta, A., Kato, T., Mitsuoka, K., Yokoyama, K.
PDB entry 7vb1: The 0.90 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with trans-vaccenic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2021-08-30
Authors: Sugiyama, S., Kakinouchi, K., Nakano, R., Matsuoka, S., Tsuchikawa, H., Sonoyama, M., Inoue, Y., Hayashi, F., Murata, M.
PDB entry 7vb2: Solution structure of human ribosomal protein uL11
Classification: RIBOSOMAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-08-30
Authors: Lee, K.M., Wong, K.B.
PDB entry 7vb3: Crystal structure of hydroxynitrile lyase from Linum usitatissimum
Classification: LYASE
Source organism: Linum usitatissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2021-08-30
Authors: Zheng, D., Nakabayashi, M., Asano, Y.
PDB entry 7vb4: A crystal structure of alphavirus nonstructural protein 4 (nsP4) reveals an intrinsically dynamic RNA-dependent RNA polymerase
Classification: TRANSFERASE
Source organism: Sindbis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2021-08-30
Authors: Tan, Y.B., Luo, D.
PDB entry 7vb5: Crystal structure of hydroxynitrile lyase from Linum usitatissimum complexed with acetone cyanohydrin
Classification: LYASE
Source organism: Linum usitatissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2021-08-30
Authors: Zheng, D., Nakabayashi, M., Asano, Y.
PDB entry 7vb6: Crystal structure of hydroxynitrile lyase from Linum usitatissium complexed with (R)-2-hydroxy-2-methylbutanenitrile
Classification: LYASE
Source organism: Linum usitatissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-08-30
Authors: Zheng, D., Nakabayashi, M., Asano, Y.
PDB entry 7vb7: Matrix arm of active state CI from DQ-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2021-08-30
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vb8: SbSOMT in complex with resveratrol and nicotinamide adenine dinucleotide(NAD+)
Classification: TRANSFERASE
Source organism: Sorghum bicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2021-08-30
Authors: Pow, K.C., Hao, Q.
PDB entry 7vb9: Rba sphaeroides PufY-KO RC-LH1 dimer type-2
Classification: PHOTOSYNTHESIS
Source organism: Cereibacter sphaeroides 2.4.1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2021-08-30
Authors: Bracun, L., Yamagata, A., Liu, L.N., Shirouzu, M.
PDB entry 7vba: Structure of the pre state human RNA Polymerase I Elongation Complex
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2021-08-31
Authors: Zhao, D., Liu, W., Chen, K., Yang, H., Xu, Y.
PDB entry 7vbb: Structure of the post state human RNA Polymerase I Elongation Complex
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2021-08-31
Authors: Zhao, D., Liu, W., Chen, K., Yang, H., Xu, Y.
PDB entry 7vbc: Back track state of human RNA Polymerase I Elongation Complex
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2021-08-31
Authors: Zhao, D., Liu, W., Chen, K., Yang, H., Xu, Y.
PDB entry 7vbd: Crystal structure of SARS-Cov-2 nucleocapsid N-terminal domain (NTD) protein,pH8.0
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2021-08-31
Authors: Zeng, P., Zhou, X.L., Zhong, F.L., Li, J., Zhang, J.
PDB entry 7vbe: 1.6 Angstrom Resolution Crystal Structure of SARS-CoV-2 Nucleocapsid dimerization domain, pH 5.0
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2021-08-31
Authors: Zhou, X.L., Zhong, F.L., Li, J., Zhang, J.
PDB entry 7vbf: 1.3 Angstrom Resolution Crystal Structure of SARS-CoV-2 Nucleocapsid dimerization domain, pH 8.5
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-08-31
Authors: Zhou, X.L., Zhong, F.L., Li, J., Zhang, J.
PDB entry 7vbg: N Terminal Domain of PRC1
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-08-31
Authors: Tan, F., Xia, B.
PDB entry 7vbh: Cryo-EM structure of the GIPR/GLP-1R/GCGR triagonist peptide 20-bound human GLP-1R-Gs complex
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Escherichia coli; Homo sapiens; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-31
Authors: Zhao, F.H., Zhou, Q.T., Cong, Z.T., Hang, K.N., Zou, X.Y., Zhang, C., Chen, Y., Dai, A.T., Liang, A.Y., Ming, Q.Q., Wang, M., Chen, L.N., Xu, P.Y., Chang, R.L., Feng, W.B., Xia, T., Zhang, Y., Wu, B.L., Yang, D.H., Zhao, L.H., Xu, H.E., Wang, M.W.
PDB entry 7vbi: Cryo-EM structure of the non-acylated tirzepatide (LY3298176)-bound human GLP-1R-Gs complex
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Escherichia coli; Homo sapiens; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-08-31
Authors: Zhao, F.H., Zhou, Q.T., Cong, Z.T., Hang, K.N., Zou, X.Y., Zhang, C., Chen, Y., Dai, A.T., Liang, A.Y., Ming, Q.Q., Wang, M., Chen, L.N., Xu, P.Y., Chang, R.L., Feng, W.B., Xia, T., Zhang, Y., Wu, B.L., Yang, D.H., Zhao, L.H., Xu, H.E., Wang, M.W.
PDB entry 7vbl: Membrane arm of active state CI from DQ-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-08-31
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vbm: The mouse nucleosome structure containing H3mm18 aided by PL2-6 scFv
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-08-31
Authors: Hirai, S., Takizawa, Y., Kujirai, T., Kurumizaka, H.
PDB entry 7vbn: Matrix arm of deactive state CI from DQ-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2021-08-31
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vbo: Alginate binding domain CBM
Classification: SUGAR BINDING PROTEIN
Source organism: Defluviitalea phaphyphila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-09-01
Authors: Ji, S.Q., She, Q.
PDB entry 7vbp: Membrane arm of deactive state CI from DQ-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-09-01
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vbq: Heterodimer structure of Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxIJ
Classification: OXIDOREDUCTASE
Source organism: Talaromyces purpureogenus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-09-01
Authors: Li, X., Awakawa, T., Mori, T., Abe, I.
PDB entry 7vbr: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI
Classification: OXIDOREDUCTASE
Source organism: Talaromyces purpureogenus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-09-01
Authors: Li, X., Awakawa, T., Mori, T., Abe, I.
PDB entry 7vbs: Structure of the AAA+ ATPase domain of the transcriptional regulator GtrR in Burkholderia cenocepacia
Classification: TRANSCRIPTION
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.998 Å
Deposited: 2021-09-01
Authors: Yan, X.F., Yong, Y., Gao, Y.G.
PDB entry 7vbt: Crystal structure of RIOK2 in complex with CQ211
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54001 Å
Deposited: 2021-09-01
Authors: Zhu, C., Zhang, Z.M.
PDB entry 7vbu: Crystal structure of human pyruvate dehydrogenase kinase 2 in complex with compound 5
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2021-09-01
Authors: Orita, T., Doi, S., Iwanaga, T., Fujishima, A., Adachi, T.
PDB entry 7vbv: Crystal structure of human pyruvate dehydrogenase kinase 2 in complex with compound 7
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2021-09-01
Authors: Orita, T., Doi, S., Iwanaga, T., Fujishima, A., Adachi, T.
PDB entry 7vbw: Structure of the GTP-bound AAA+ ATPase domain of the transcriptional regulator GtrR in Burkholderia cenocepacia
Classification: TRANSCRIPTION
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-09-01
Authors: Yan, X.F., Yong, Y., Gao, Y.G.
PDB entry 7vbx: Crystal structure of human pyruvate dehydrogenase kinase 2 in complex with compound 20
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-09-01
Authors: Orita, T., Doi, S., Iwanaga, T., Fujishima, A., Adachi, T.
PDB entry 7vby: Tom core complex with Tom20 and Tom22 subunits.
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2021-09-01
Authors: Liu, D.S., Sui, S.F.
PDB entry 7vbz: Matrix arm of active state CI from Rotenone-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2021-09-01
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vc0: Membrane arm of active state CI from Rotenone-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-09-01
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vc1: Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with inhibitor L95 and L-proline in space group P21
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2021-09-01
Authors: Yogavel, M., Malhotra, N., Sharma, A.
PDB entry 7vc2: Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with inhibitor L96 and L-proline in space group P21
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.096 Å
Deposited: 2021-09-01
Authors: Yogavel, M., Malhotra, N., Sharma, A.
PDB entry 7vc3: Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with inhibitor L97 and L-proline at 1.97 A resolution
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.973 Å
Deposited: 2021-09-01
Authors: Malhotra, N., Yogavel, M., Sharma, A.
PDB entry 7vc4: Tom complex with Tom22 and Tom20 subunits
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2021-09-01
Authors: Liu, D.S., Sui, S.F.
PDB entry 7vc5: Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with inhibitor T35 and Febrifugine (FF) at 1.61 A resolution
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.612 Å
Deposited: 2021-09-01
Authors: Manickam, Y., Malhotra, N., Sharma, A.
PDB entry 7vc6: The structure of beta-xylosidase from Phanerochaete chrysosporium(PcBxl3)
Classification: HYDROLASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2021-09-01
Authors: Kojima, K., Sunagawa, N., Igarashi, K.
PDB entry 7vc7: The structure of beta-xylosidase from Phanerochaete chrysosporium(PcBxl3)
Classification: HYDROLASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2021-09-01
Authors: Kojima, K., Sunagawa, N., Igarashi, K.
PDB entry 7vc8: Complex structure of AtHPPD with inhibitor PYQ3
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.606 Å
Deposited: 2021-09-01
Authors: Yang, G.F., Lin, H.Y.
PDB entry 7vc9: Tom20 subunits
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 13 Å
Deposited: 2021-09-02
Authors: Liu, D.S., Sui, S.F.
PDB entry 7vce: Structural studies of human inositol monophosphatase-1 inhibition by ebselen
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-09-02
Authors: Abuhammad, A., Laurieri, N., Rice, A., Lowe, E.D., McDonough, M.A., Singh, N., Churchill, G.C.
PDB entry 7vcf: Cryo-EM structure of Chlamydomonas TOC-TIC supercomplex
Classification: TRANSLOCASE
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-09-02
Authors: Wu, J., Yan, Z., Jin, Z., Zhang, Y.
PDB entry 7vcg: Thaumatin protected by alginate gel
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-09-03
Authors: Muroyama, H., Tomoike, F., Nagae, T., Okada, T.
PDB entry 7vch: Crystal structure of Neisseria meningitidis EarP bound TDP-L-Rhamnose
Classification: TRANSFERASE
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-09-03
Authors: Yoo, Y.
PDB entry 7vci: Structure of Xenopus laevis NPC nuclear ring asymmetric unit
Classification: NUCLEAR PROTEIN
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.1 Å
Deposited: 2021-09-03
Authors: Tai, L., Zhu, Y., Sun, F.
PDB entry 7vcj: Arginine kinase H227A from Daphnia magna
Classification: TRANSFERASE
Source organism: Daphnia magna
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-09-03
Authors: Kim, D.S., Jang, K., Kim, W.S., Kim, Y.J., Park, J.H.
PDB entry 7vck: NMR solution structures of a hairpin formed by GGCCTG repeats
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2021-09-03
Authors: Yi, J., Wan, L., Guo, P.
PDB entry 7vcl: structure of viral protein BKRF4 in complex with H2A-H2B
Classification: NUCLEAR PROTEIN
Source organism: Epstein-Barr virus (strain GD1); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-09-03
Authors: Liu, Y.R.
PDB entry 7vcm: crystal structure of GINKO1
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria; Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-09-03
Authors: Wen, Y., Campbell, R.E., Lemieux, M.J.
PDB entry 7vcn: Crystal Structure of PitA fragment from pilus islet-2 of Streptococcus oralis with Tb-Xo4
Classification: CELL ADHESION
Source organism: Streptococcus oralis ATCC 35037
Experimental method: X-RAY DIFFRACTION
Resolution: 2.343 Å
Deposited: 2021-09-03
Authors: Yadav, R.K., Krishnan, V.
PDB entry 7vco: Frischella perrara beta-fructofuranosidase
Classification: HYDROLASE
Source organism: Frischella perrara
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-09-03
Authors: Tonozuka, T.
PDB entry 7vcp: Frischella perrara beta-fructofuranosidase in complex with fructose
Classification: HYDROLASE
Source organism: Frischella perrara
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-09-03
Authors: Tonozuka, T.
PDB entry 7vcq: structure of viral protein BKRF4 in complex with H3.3-H4-ASF1
Classification: NUCLEAR PROTEIN
Source organism: Epstein-Barr virus (strain AG876); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-09-03
Authors: Liu, Y.R.
PDB entry 7vcr: Crystal Structure of PitA fragment from pilus islet-2 of Streptococcus oralis
Classification: CELL ADHESION
Source organism: Streptococcus oralis ATCC 35037
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-09-03
Authors: Yadav, R.K., Krishnan, V.
PDB entry 7vcs: Human p97 double hexamer conformer II with ATPgammaS bound
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2021-09-03
Authors: Gao, H., Li, F., Shi, Z., Li, Y., Yu, H.
PDB entry 7vct: Human p97 single hexamer conformer III with D1-ATPgammaS and D2-ADP bound
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2021-09-04
Authors: Gao, H., Li, F., Shi, Z., Li, Y., Yu, H.
PDB entry 7vcu: Human p97 double hexamer conformer I with D1-ATPgammaS and D2-ADP bound
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2021-09-04
Authors: Gao, H., Li, F., Shi, Z., Li, Y., Yu, H.
PDB entry 7vcv: Human p97 single hexamer conformer I with ATPgammaS bound
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2021-09-04
Authors: Gao, H., Li, F., Shi, Z., Li, Y., Yu, H.
PDB entry 7vcx: Human p97 single hexamer conformer II with ATPgammaS bound
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2021-09-04
Authors: Gao, H., Li, F., Shi, Z., Li, Y., Yu, H.
PDB entry 7vd2: Human TOM complex without cross-linking
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2021-09-06
Authors: Liu, D.S., Sui, S.F.
PDB entry 7vd4: Crystal structure of BPTF-BRD with ligand TP248 bound
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85659 Å
Deposited: 2021-09-06
Authors: Lu, T., Lu, H.B.
PDB entry 7vd5: Structure of C2S2M2-type PSII-FCPII supercomplex from diatom
Classification: ELECTRON TRANSPORT
Source organism: Chaetoceros gracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-09-06
Authors: Nagao, R., Kato, K., Akita, F., Miyazaki, N., Shen, J.R.
PDB entry 7vd6: Structure of S1M1-type FCPII complex from diatom
Classification: ELECTRON TRANSPORT
Source organism: Chaetoceros gracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-09-06
Authors: Nagao, R., Kato, K., Akita, F., Miyazaki, N., Shen, J.R.
PDB entry 7vd7: Toxin - Antitoxin complex from Salmonella enterica serovar Typhimurium
Classification: TOXIN/ANTITOXIN
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2021-09-06
Authors: Eun, H.-J., Lee, B.-J., Jang, S.-W., Park, J.-H.
PDB entry 7vd8: 1.96 A structure of human apoferritin obtained from Talos Arctica microscope
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.96 Å
Deposited: 2021-09-06
Authors: Fan, H.C., Zhang, Y., Sun, F.
PDB entry 7vd9: 2.29 A structure of the human catalase
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2021-09-06
Authors: Fan, H.C., Zhang, Y., Sun, F.
PDB entry 7vda: 2.26 A structure of the glutamate dehydrogenase
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.26 Å
Deposited: 2021-09-06
Authors: Fan, H.C., Zhang, Y., Sun, F.
PDB entry 7vdc: 3.28 A structure of the rabbit muscle aldolase
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2021-09-06
Authors: Fan, H.C., Zhang, Y., Sun, F.
PDB entry 7vdd: Human TOM complex with cross-linking
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2021-09-06
Authors: Liu, D.S., Sui, S.F.
PDB entry 7vde: 3.6 A structure of the human hemoglobin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-09-06
Authors: Fan, H.C., Zhang, Y., Sun, F.
PDB entry 7vdf: 2.56 A structure of influenza hemagglutinin (HA) trimer
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2021-09-06
Authors: Fan, H.C., Zhang, Y., Sun, F.
PDB entry 7vdh: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with C48/80, state2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-09-07
Authors: Li, Y., Yang, F.
PDB entry 7vdl: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with circular cortistatin-14
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2021-09-07
Authors: Li, Y., Yang, F.
PDB entry 7vdm: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with substance P
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2021-09-07
Authors: Li, Y., Yang, F.
PDB entry 7vdn: High resolution crystal structure of Sperm Whale Myoglobin in the carbonmonoxy form
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2021-09-07
Authors: Shibayama, N., Sato-Tomita, A., Ishimoto, N., Park, S.Y.
PDB entry 7vdo: Crystal structure of KRED F147L/L153Q/Y190P variant
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus kefiri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85572 Å
Deposited: 2021-09-07
Authors: Cui, J., Huang, X., Wang, B., Zhao, H., Zhou, J.
PDB entry 7vdp: The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2021-09-07
Authors: Malojcic, G., Clugston, S.L., Daniels, M., Harmange, J.C., Ledeborer, M.
PDB entry 7vdq: The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 7
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2021-09-07
Authors: Malojcic, G., Clugston, S.L., Daniels, M., Harmange, J.C., Ledeborer, M.
PDB entry 7vdr: The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 13
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-09-07
Authors: Malojcic, G., Clugston, S.L., Daniels, M., Harmange, J.C., Ledeborer, M.
PDB entry 7vds: The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 24
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2021-09-07
Authors: Malojcic, G., Clugston, S.L., Daniels, M., Harmange, J.C., Ledeborer, M.
PDB entry 7vdt: The motor-nucleosome module of human chromatin remodeling PBAF-nucleosome complex
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-09-07
Authors: Chen, Z.C., Chen, K.J., Yuan, J.J.
PDB entry 7vdu: The structure of cyclin-dependent kinase 2 (CDK2) in complex with Compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2021-09-07
Authors: Malojcic, G., Clugston, S.L., Daniels, M., Harmange, J.C., Ledeborer, M.
PDB entry 7vdv: The overall structure of human chromatin remodeling PBAF-nucleosome complex
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; unidentified; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-09-07
Authors: Chen, Z.C., Chen, K.J., Yuan, J.J.
PDB entry 7vdy: Crystal structure of O-ureidoserine racemase
Classification: ISOMERASE
Source organism: Streptomyces lavendulae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2021-09-07
Authors: Oda, K., Matoba, Y.
PDB entry 7ve0: Crystal Structure of Ritonavir bound Plasmepsin II (PMII) from Plasmodium falciparum
Classification: HYDROLASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-09-07
Authors: Mishra, V., Rathore, I., Bhaumik, P.
PDB entry 7ve2: Crystal Structure of Lopinavir bound Plasmepsin II (PMII) from Plasmodium falciparum
Classification: HYDROLASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-09-07
Authors: Mishra, V., Rathore, I., Bhaumik, P.
PDB entry 7ve3: Structure of the complex of sheep lactoperoxidase with hypoiodite at 2.70 A resolution
Classification: OXIDOREDUCTASE
Source organism: Ovis aries
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-09-07
Authors: Singh, P.K., Yamini, S., Singh, R.P., Singh, A.K., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 7ve4: C-terminal domain of VraR
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2021-09-08
Authors: Kumar, J.V., Chen, C., Hsu, C.H.
PDB entry 7ve5: C-terminal domain of VraR
Classification: DNA BINDING PROTEIN/DNA
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-09-08
Authors: Kumar, J.V., Chen, C., Hsu, C.H.
PDB entry 7ve6: N-terminal domain of VraR
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus (strain Mu50 / ATCC 700699)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2021-09-08
Authors: Kumar, J.V., Chen, C., Hsu, C.H.
PDB entry 7ve7: Crystal structure of KRED mutant-F147L/L153Q/Y190P/L199A/M205F/M206F
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus kefiri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72001 Å
Deposited: 2021-09-08
Authors: Cui, J., Huang, X., Wang, B., Zhao, H., Zhou, J.
PDB entry 7vea: Pentacylindrical allophycocyanin core from Thermosynechococcus vulcanus
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus vestitus BP-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-09-08
Authors: Kawakami, K., Hamaguchi, T., Hirose, Y., Kosumi, D., Miyata, M., Kamiya, N., Yonekura, K.
PDB entry 7veb: Phycocyanin rod structure of cyanobacterial phycobilisome
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus BP-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2021-09-08
Authors: Kawakami, K., Hamaguchi, T., Hirose, Y., Kosumi, D., Miyata, M., Kamiya, N., Yonekura, K.
PDB entry 7vec: Crystal structure of GABARAP complexed with the TEX264 LIR phosphorylated at Ser271 and Ser272
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-09-08
Authors: Noda, N.N.
PDB entry 7ved: Crystal structure of GABARAP fused to TEX264 LIR with S272D mutation
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2021-09-08
Authors: Yamasaki, A., Noda, N.N.
PDB entry 7vee: The ligand-free structure of GfsA KSQ-AT didomain
Classification: TRANSFERASE
Source organism: Streptomyces graminofaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-09-08
Authors: Chisuga, T., Miyanaga, A., Nagai, A., Kudo, F., Eguchi, T.
PDB entry 7vef: The structure of GfsA KSQ-AT didomain in complex with a malonate substrate analog
Classification: TRANSFERASE
Source organism: Streptomyces graminofaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2021-09-08
Authors: Chisuga, T., Miyanaga, A., Nagai, A., Kudo, F., Eguchi, T.
PDB entry 7veg: Understanding NH-pi interaction between Gln and Phe
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2021-09-08
Authors: Fan, S., Xu, F.
PDB entry 7veh: Type I-F Anti-CRISPR protein AcrIF13
Classification: VIRAL PROTEIN
Source organism: Moraxella catarrhalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2021-09-08
Authors: Gao, T., Feng, Y.
PDB entry 7vei: Neutron structure of D2O-solvent lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: NEUTRON DIFFRACTION
Resolution: 2 Å
Deposited: 2021-09-08
Authors: Chatake, T., Tanaka, I., Kusaka, K., Fujiwara, S.
PDB entry 7vej: Crystal structure of Phytolacca americana UGT3 with kaempferol and UDP-2fluoroglucose
Classification: TRANSFERASE
Source organism: Phytolacca americana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-09-09
Authors: Maharjan, R., Fukuda, Y., Nakayama, T., Nakayama, T., Hamada, H., Ozaki, S., Inoue, T.
PDB entry 7vek: Crystal structure of Phytolacca americana UGT3 with capsaicin and UDP-2fluoroglucose
Classification: TRANSFERASE
Source organism: Phytolacca americana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-09-09
Authors: Maharjan, R., Fukuda, Y., Nakayama, T., Nakayama, T., Hamada, H., Ozaki, S., Inoue, T.
PDB entry 7vel: Crystal structure of Phytolacca americana UGT3 with UDP-2fluoroglucose
Classification: TRANSFERASE
Source organism: Phytolacca americana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-09-09
Authors: Maharjan, R., Fukuda, Y., Nakayama, T., Nakayama, T., Hamada, H., Ozaki, S., Inoue, T.
PDB entry 7vem: the NADPH-assisted quinone oxidoreductase from Phytophthora capsici
Classification: PROTEIN BINDING
Source organism: Phytophthora capsici LT1534
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-09-09
Authors: Yang, C.C., Zhu, C.Y.
PDB entry 7ven: Structure of burosumab Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-09-09
Authors: Heo, Y.S.
PDB entry 7veo: Crystal structure of juvenile hormone acid methyltransferase silkworm JHAMT isoform3 complex with S-Adenosyl-L-homocysteine
Classification: HORMONE
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2021-09-09
Authors: Guo, P.C., Zhang, Y.S., Zhang, l., Xu, H.Y.
PDB entry 7vep: Crystal structure and biophysical characterization of TPR domain of EccA5 from ESX-5 pathway of Mycobacterium tuberculosis H37RVR
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-09-09
Authors: Ramachandran, R., Sharma, V.K., Vishwakarma, J.
PDB entry 7veq: Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in an open conformation
Classification: SUGAR BINDING PROTEIN
Source organism: Sphingomonas sp. A1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.696 Å
Deposited: 2021-09-10
Authors: Anamizu, K., Takase, R., Hio, M., Watanebe, D., Mikami, B., Hashimoto, W.
PDB entry 7ver: Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in a full open conformation
Classification: SUGAR BINDING PROTEIN
Source organism: Sphingomonas sp. A1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.699 Å
Deposited: 2021-09-10
Authors: Anamizu, K., Takase, R., Hio, M., Watanebe, D., Mikami, B., Hashimoto, W.
PDB entry 7ves: Crystal Structure of nucleotide-free Irgb6
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-09-10
Authors: Saijo-Hamano, Y., Sakai, N., Nitta, R.
PDB entry 7vet: Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in a closed conformation
Classification: SUGAR BINDING PROTEIN
Source organism: Sphingomonas sp. A1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-09-10
Authors: Anamizu, K., Takase, R., Hio, M., Watanebe, D., Mikami, B., Hashimoto, W.
PDB entry 7veu: Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in complex with galacturonic acid
Classification: SUGAR BINDING PROTEIN
Source organism: Sphingomonas sp. A1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.736 Å
Deposited: 2021-09-10
Authors: Anamizu, K., Takase, R., Hio, M., Watanebe, D., Mikami, B., Hashimoto, W.
PDB entry 7vev: Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in complex with MES
Classification: SUGAR BINDING PROTEIN
Source organism: Sphingomonas sp. A1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.498 Å
Deposited: 2021-09-10
Authors: Anamizu, K., Takase, R., Hio, M., Watanebe, D., Mikami, B., Hashimoto, W.
PDB entry 7vew: Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in complex with unsaturated trigalacturonic acid
Classification: SUGAR BINDING PROTEIN
Source organism: Sphingomonas sp. A1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-09-10
Authors: Anamizu, K., Takase, R., Hio, M., Watanebe, D., Mikami, B., Hashimoto, W.
PDB entry 7vex: Crystal Structure of GTP-bound Irgb6
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2021-09-10
Authors: Saijo-Hamano, Y., Sakai, N., Nitta, R.
PDB entry 7vey: Crystal structure of Cyclosorus parasiticus chalcone synthase 1 (CpCHS1)
Classification: TRANSFERASE
Source organism: Cyclosorus parasiticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-09-10
Authors: Li, J.X., Cheng, A.X.
PDB entry 7vez: Crystal structure of Cyclosorus parasiticus chalcone synthase 1 (CpCHS1) complex with naringenin
Classification: TRANSFERASE
Source organism: Cyclosorus parasiticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.397 Å
Deposited: 2021-09-10
Authors: Li, J.X., Cheng, A.X.
PDB entry 7vf0: Crystal structure of Cyclosorus parasiticus chalcone synthase 1 (CpCHS1) complex with naringenin and CoA
Classification: TRANSFERASE
Source organism: Cyclosorus parasiticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.399 Å
Deposited: 2021-09-10
Authors: Li, J.X., Cheng, A.X.
PDB entry 7vf1: Solution structure of a duplex-quadruplex hybrid formed by d[G4C2] repeats
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2021-09-10
Authors: Maity, A., Lim, K.W., Shneider, N.A., Chen, G., Phan, A.T.