LiteFold/PDB huggingface dataset:
PDB entry 5ei0: Structure of RCL-cleaved vaspin (serpinA12)
Classification: HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-10-29
Authors: Pippel, J., Kuettner, B.E., Ulbricht, D., Daberger, J., Schultz, S., Heiker, J.T., Strater, N.
PDB entry 5ei1: Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with the imidazopyridine derivative 2-(4-hydroxyphenyl)-3-iodanyl-imidazo[1,2-a]pyridin-6-ol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-10-29
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5ei2: Rapid Discovery of Pyrido[3,4-d]pyrimidine Inhibitors of Monopolar Spindle kinase 1 (MPS1) Using a Structure-Based Hydridization Approach
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2015-10-29
Authors: Innocenti, P., Woodward, H.L., Solanki, S., Naud, N., Westwood, I.M., Cronin, N., Hayes, A., Roberts, J., Henley, A.T., Baker, R., Faisal, A., Mak, G., Box, G., Valenti, M., De Haven Brandon, A., O'Fee, L., Saville, J., Schmitt, J., Burke, R., van Montfort, R.L.M., Raymaud, F.I., Eccles, S.A., Linardopoulos, S., Blagg, J., Hoelder, S.
PDB entry 5ei3: Co-crystal structure of eIF4E with nucleotide mimetic inhibitor.
Classification: TRANSLATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2015-10-29
Authors: Nowicki, M.W., Walkinshaw, M.D., Fischer, P.M.
PDB entry 5ei4: First domain of human bromodomain BRD4 in complex with inhibitor 8-(5-Amino-1H-[1,2,4]triazol-3-ylsulfanylmethyl)-3-(4-chlorobenzyl)-7-ethyl-3,7-dihydropurine-2,6-dione
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2015-10-29
Authors: Raux, B., Rebuffet, E., Betzi, S., Morelli, X.
PDB entry 5ei5: Crystal structure of MSF-aged Torpedo californica Acetylcholinesterase in complex with alkylene-linked bis-tacrine dimer (7 carbon linker)
Classification: HYDROLASE
Source organism: Torpedo californica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-10-29
Authors: Pesaresi, A., Lamba, D.
PDB entry 5ei6: Rapid Discovery of Pyrido[3,4-d]pyrimidine Inhibitors of Monopolar Spindle kinase 1 (MPS1) Using a Structure-Based Hydridization Approach
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2015-10-29
Authors: Innocenti, P., Woodward, H.L., Solanki, S., Naud, N., Westwood, I.M., Cronin, N., Hayes, A., Roberts, J., Henley, A.T., Baker, R., Faisal, A., Mak, G., Box, G., Valenti, M., De Haven Brandon, A., O'Fee, L., Saville, J., Schmitt, J., Burke, R., van Montfort, R.L.M., Raymaud, F.I., Eccles, S.A., Linardopoulos, S., Blagg, J., Hoelder, S.
PDB entry 5ei8: Rapid Discovery of Pyrido[3,4-d]pyrimidine Inhibitors of Monopolar Spindle kinase 1 (MPS1) Using a Structure-Based Hydridization Approach
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2015-10-29
Authors: Innocenti, P., Woodward, H.L., Solanki, S., Naud, N., Westwood, I.M., Cronin, N., Hayes, A., Roberts, J., Henley, A.T., Baker, R., Faisal, A., Mak, G., Box, G., Valenti, M., De Haven Brandon, A., O'Fee, L., Saville, J., Schmitt, J., Burke, R., van Montfort, R.L.M., Raymaud, F.I., Eccles, S.A., Linardopoulos, S., Blagg, J., Hoelder, S.
PDB entry 5ei9: Human PRDM9 allele-A ZnF Domain with Associated Recombination Hotspot DNA Sequence I
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.921 Å
Deposited: 2015-10-29
Authors: Patel, A., Horton, J.R., Wilson, G.G., Zhang, X., Cheng, X.
PDB entry 5eia: mACHE-anti TZ2PA5 complex from a 1:6 mixture of the syn/anti isomers
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-10-29
Authors: Bourne, Y., Marchot, P.
PDB entry 5eib: Crystal structure of CPAP PN2-3 C-terminal loop-helix in complex with DARPin-tubulin
Classification: CELL CYCLE
Source organism: Bos taurus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-10-29
Authors: Li, H., Zheng, X.
PDB entry 5eic: Crystal structure of the bromodomain of human CREBBP in complex with AYC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-10-29
Authors: Dong, J., Caflisch, A.
PDB entry 5eid: AKR2A ankyrin repeat domain
Classification: PROTEIN TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-10-29
Authors: Pu, H., Li, H.
PDB entry 5eie: mAChE-TZ2 complex
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-10-29
Authors: Bourne, Y., Marchot, P.
PDB entry 5eif: DENGUE 3 NS5 METHYLTRANSFERASE BOUND TO S-ADENOSYL METHIONINE AND FRAGMENT NB2C3
Classification: TRANSFERASE
Source organism: Dengue virus type 3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-10-29
Authors: Barral, K., Bricogne, G., Sharff, A.
PDB entry 5eig: Engineered human cystathionine gamma lyase (E59T, E339V) to deplet cysteine
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-10-29
Authors: Yan, W., Zhang, J.
PDB entry 5eih: mAChE-TZ2/PA5 complex
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-10-29
Authors: Bourne, Y., Marchot, P.
PDB entry 5eii: Structural determination of an protein complex of a Fab with increased solubility
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2015-10-29
Authors: Bailey, L.J., Kossiakoff, A.A., Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS)
PDB entry 5eij: Carbonic Anhydrase II in complex with Sulfonamide Inhibitor
Classification: Lyase/Lyase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2015-10-29
Authors: Lomelino, C.L., Mahon, B.P., McKenna, R.
PDB entry 5eik: Structure of a Trimeric Intracellular Cation channel from C. elegans in the absence of Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-10-30
Authors: Hu, M.H., Yang, H.T., Liu, Z.F.
PDB entry 5eil: Computational design of a high-affinity metalloprotein homotrimer containing a metal chelating non-canonical amino acid
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-10-30
Authors: Sankaran, B., Zwart, P.H., Mills, J.H., Pereira, J.H., Baker, D.
PDB entry 5eim: YTH domain-containing protein mmi1 and RNA complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Schizosaccharomyces pombe 972h-; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2015-10-30
Authors: Wu, B.X., Xu, J.H., Su, S.C., Ma, J.B.
PDB entry 5ein: Crystal structure of C148A mutant of LysY from Thermus thermophilus in complex with NADP+ and LysW-gamma-aminoadipic acid
Classification: OXIDOREDUCTASE/BIOSYNTHETIC PROTEIN
Source organism: Thermus thermophilus; Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-10-30
Authors: Shimizu, T., Tomita, T., Nishiyama, M.
PDB entry 5eio: Crystal structure of LysY from Thermus thermophilus complexed with NADP+ and LysW-gamma-aminoadipic semialdehyde
Classification: OXIDOREDUCTASE/BIOSYNTHETIC PROTEIN
Source organism: Thermus thermophilus; Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-10-30
Authors: Shimizu, T., Tomita, T., Nishiyama, M.
PDB entry 5eip: apo-structure of YTH domain of SpMmi1
Classification: RNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe 972h-
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2015-10-30
Authors: Wu, B.X., Xu, J.H., Su, S.C., Ma, J.B.
PDB entry 5eiq: Human OSCAR ligand-binding domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2015-10-30
Authors: Hinerman, J.M., Conrady, D.G., Herr, A.B.
PDB entry 5eir: Co-crystal structure of eIF4E with nucleotide mimetic inhibitor.
Classification: TRANSLATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2015-10-30
Authors: Nowicki, M.W., Walkinshaw, M.D., Fischer, P.M.
PDB entry 5eis: FIRST DOMAIN OF HUMAN BROMODOMAIN BRD4 IN COMPLEX WITH INHIBITOR 3-(4-Chlorobenzyl)-7-ethyl-3,7-dihydropurine-2,6-dione
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-10-30
Authors: Raux, B., Rebuffet, E., Betzi, S., Morelli, X.
PDB entry 5eit: Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with the imidazopyridine derivative 2-(4-hydroxyphenyl)-3-(trifluoromethyl)imidazo[1,2-a]pyridin-6-ol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2015-10-30
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5eiu: Mini TRIM5 B-box 2 dimer C2 crystal form
Classification: LIGASE
Source organism: Macaca mulatta; Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.908 Å
Deposited: 2015-10-30
Authors: Wagner, J.M., Doss, G., Pornillos, O.
PDB entry 5eiv: Crystal structure of complex of osteoclast-associated immunoglobulin-like receptor (OSCAR) and a synthetic collagen consensus peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.414 Å
Deposited: 2015-10-30
Authors: Zhou, L., Blaszczyk, M., Chirgadze, D., Bihan, D., Farndale, R.W.
PDB entry 5eiw: DENGUE 3 NS5 METHYLTRANSFERASE BOUND TO S-ADENOSYL METHIONINE AND FRAGMENT NB3C2
Classification: TRANSFERASE
Source organism: Dengue virus type 3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.611 Å
Deposited: 2015-10-30
Authors: Barral, K., Bricogne, G., Sharff, A.
PDB entry 5eix: QUINOLONE-STABILIZED CLEAVAGE COMPLEX OF TOPOISOMERASE IV FROM KLEBSIELLA PNEUMONIAE
Classification: ISOMERASE/DNA
Source organism: Klebsiella pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2015-10-30
Authors: Veselkov, D.A., Laponogov, I., Pan, X.-S., Selvarajah, J., Branstrom, A., Fisher, L.M., Sanderson, M.R.
PDB entry 5eiy: Bacterial cellulose synthase bound to a substrate analogue
Classification: MEMBRANE PROTEIN
Source organism: Rhodobacter sphaeroides; Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2015-10-30
Authors: McNamara, J.T., Zimmer, J.
PDB entry 5eiz: Crystal structure of Y99A mutant of human macrophage migration inhibitory factor
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2015-10-30
Authors: Pantouris, G., Lolis, E.
PDB entry 5ej0: The vaccinia virus H3 envelope protein, a major target of neutralizing antibodies, exhibits a glycosyltransferase fold and binds UDP-Glucose
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus (strain Western Reserve)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-10-30
Authors: Singh, K., Gittis, A.G., Gitti, R.K., Ostazesky, S.A., Su, H.P., Garboczi, D.N.
PDB entry 5ej1: Pre-translocation state of bacterial cellulose synthase
Classification: METAL BINDING PROTEIN
Source organism: Rhodobacter sphaeroides; Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2015-10-30
Authors: Moragn, J.L.W., Zimmer, J.
PDB entry 5ej2: Crystal structure of Carveol dehydrogenase from Mycobacterium avium in complex with NAD
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium avium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-10-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ej3: Crystal structure of XlnB2
Classification: HYDROLASE
Source organism: Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.314 Å
Deposited: 2015-11-01
Authors: Couture, J.-F.
PDB entry 5ej4: EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 15 min
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.773 Å
Deposited: 2015-11-01
Authors: Song, H.G., Dong, C., Chen, Y.Z., Sun, Y.R., Guo, Z.H.
PDB entry 5ej5: EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 1.5 h
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-11-01
Authors: Song, H.G., Dong, C., Chen, Y.Z., Sun, Y.R., Guo, Z.H.
PDB entry 5ej6: EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 2min then soaked with isochorismate for 2 min
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.243 Å
Deposited: 2015-11-01
Authors: Song, H.G., Dong, C., Chen, Y.Z., Sun, Y.R., Guo, Z.H.
PDB entry 5ej7: EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 21 s
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2015-11-01
Authors: Song, H.G., Dong, C., Chen, Y.Z., Sun, Y.R., Guo, Z.H.
PDB entry 5ej8: EcMenD-ThDP-Mn2+ complex structure soaked with 2-ketoglutarate for 2 min
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2015-11-01
Authors: Song, H.G., Dong, C., Chen, Y.Z., Sun, Y.R., Guo, Z.H.
PDB entry 5ej9: EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 2 min and isochorismate for 13 min
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2015-11-01
Authors: Song, H.G., Dong, C., Chen, Y.Z., Sun, Y.R., Guo, Z.H.
PDB entry 5eja: EcMenD-ThDP-Mn2+ complex soaked with 2-ketoglutarate for 2 min and soaked with isochorismate for 7 min
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-11-01
Authors: Song, H.G., Dong, C., Chen, Y.Z., Sun, Y.R., Guo, Z.H.
PDB entry 5ejb: Crystal structure of prefusion Hendra virus F protein
Classification: VIRAL PROTEIN
Source organism: Hendra virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2015-11-01
Authors: Wong, J.W., Jardetzky, T.S., Paterson, R.G., Lamb, R.A.
PDB entry 5ejc: Crystal structural of the TSC1-TBC1D7 complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2015-11-01
Authors: Wang, Z., Qin, J., Gong, W., Xu, W.
PDB entry 5ejd: The crystal structure of holo T3CT
Classification: BIOSYNTHETIC PROTEIN
Source organism: Penicillium aethiopicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2015-11-01
Authors: Zhang, J.R., Tang, Y., Zhou, J.H.
PDB entry 5eje: Crystal structure of E. coli Adenylate kinase G56C/T163C double mutant in complex with Ap5a
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-11-01
Authors: Sauer, U.H., Kovermann, M., Grundstrom, C., Wolf-Watz, M., Sauer-Eriksson, A.E.
PDB entry 5ejf: Crystal structure of NAD kinase P101A mutant from Listeria monocytogenes
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2015-11-01
Authors: Poncet-Montange, G., Assairi, L., Gelin, M., Pochet, S., Labesse, G.
PDB entry 5ejg: Crystal structure of NAD kinase P252D mutant from Listeria monocytogenes
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.877 Å
Deposited: 2015-11-01
Authors: Poncet-Montange, G., Assairi, L., Gelin, M., Pochet, S., Labesse, G.
PDB entry 5ejh: Crystal structure of NAD kinase V98S mutant from Listeria monocytogenes
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-11-01
Authors: Poncet-Montange, G., Assairi, L., Gelin, M., Pochet, S., Labesse, G.
PDB entry 5eji: Crystal structure of NAD kinase W78F mutant from Listeria monocytogenes in complex with NADP/Mn++/PPi
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.292 Å
Deposited: 2015-11-01
Authors: Poncet-Montange, G., Assairi, L., Gelin, M., Pochet, S., Labesse, G.
PDB entry 5ejj: Crystal structure of UfSP from C.elegans
Classification: HYDROLASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-11-02
Authors: Kim, K., Ha, B., Kim, E.E.
PDB entry 5ejk: Crystal structure of the Rous sarcoma virus intasome
Classification: Transferase/DNA
Source organism: Rous sarcoma virus (strain Prague C); Rous sarcoma virus (strain Schmidt-Ruppin E); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2015-11-02
Authors: Yin, Z., Shi, K., Banerjee, S., Aihara, H.
PDB entry 5ejl: MrkH, A novel c-di-GMP dependence transcription regulatory factor.
Classification: DNA BINDING PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-11-02
Authors: Wang, F., Zhu, D., Gu, L.
PDB entry 5ejm: ThDP-Mn2+ complex of R413A variant of EcMenD soaked with 2-ketoglutarate for 35 min
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2015-11-02
Authors: Song, H.G., Dong, C., Chen, Y.Z., Sun, Y.R., Guo, Z.H.
PDB entry 5ejn: Crystal structure of Juno, the mammalian egg receptor for sperm Izumo1
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.703 Å
Deposited: 2015-11-02
Authors: Nishimura, K., Han, L., Jovine, L.
PDB entry 5ejo: Crystal structure of the winged helix domain in Chromatin assembly factor 1 subunit p90
Classification: NUCLEAR PROTEIN
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2015-11-02
Authors: Zhang, K., Gao, Y., Li, J., Burgess, R., Han, J., Liang, H., Zhang, Z., Liu, Y.
PDB entry 5ejq: Structure of Dictyostelium Discoideum Myosin VII MyTH4-FERM MF1 domain, mutant 2
Classification: MOTOR PROTEIN
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2015-11-02
Authors: Planelles-Herrero, V.J., Sirkia, H., Sourigues, Y., Titus, M.A., Houdusse, A.
PDB entry 5ejr: Structure of Dictyostelium Discoideum Myosin VII MyTH4-FERM MF2 domain
Classification: MOTOR PROTEIN
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-11-02
Authors: Planelles-Herrero, V.J., Sirkia, H., Sourigues, Y., Clause, J., Titus, M.A., Houdusse, A.
PDB entry 5ejs: Structure of Dictyostelium Discoideum Myosin VII MyTH4-FERM MF2 domain, mutant 1
Classification: MOTOR PROTEIN
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-11-02
Authors: Planelles-Herrero, V.J., Sirkia, H., Sourigues, Y., Titus, M.A., Houdusse, A.
PDB entry 5ejt: Thermally annealed ferryl Cytochrome C Peroxidase crystal structure
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2015-11-02
Authors: Doukov, T., Soltis, S.M., Baxter, E.L., Cohen, A., Song, J., McPhillips, S., Poulos, T.L., Meharenna, Y.T., Chreifi, G.
PDB entry 5eju: Ensemble refinement of the Crystal Structure of the Reversibly photoswitching chromoprotein Dathail, Ground State
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-11-02
Authors: Close, D.W., Langan, P.S., Bradbury, A.R.M.
PDB entry 5ejv: RORy in complex with T090131718 and Coactivator peptide EBI96
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2015-11-02
Authors: Marcotte, D.M.
PDB entry 5ejw: Crystal structure of chromobox homolog 7 (CBX7) chromodomain with MS351
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-11-02
Authors: Ren, C., Zhou, M.M.
PDB entry 5ejx: X-ray Free Electron Laser Structure of Cytochrome C Peroxidase
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-11-02
Authors: Doukov, T., Soltis, S.M., Baxter, E.L., Cohen, A., Song, J., McPhillips, S., Poulos, T.L., Meharenna, Y.T., Chreifi, G.
PDB entry 5ejy: Structure of Dictyostelium Discoideum Myosin VII MyTH4-FERM MF1 domain
Classification: MOTOR PROTEIN
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-11-02
Authors: Sirigu, S., Titus, M.A., Houdusse, A.
PDB entry 5ejz: Bacterial Cellulose Synthase Product-Bound State
Classification: METAL BINDING PROTEIN
Source organism: Rhodobacter sphaeroides; Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2015-11-02
Authors: Morgan, J.L.W., Zimmer, J.
PDB entry 5ek0: Human Nav1.7-VSD4-NavAb in complex with GX-936.
Classification: METAL TRANSPORT
Source organism: Arcobacter butzleri, Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.53 Å
Deposited: 2015-11-03
Authors: Ahuja, S., Mukund, S., Starovasnik, M.A., Koth, C.M., Payandeh, J.
PDB entry 5ek2: Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with NLG919 analogue
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2015-11-03
Authors: Peng, Y.H., Wu, J.S., Wu, S.Y.
PDB entry 5ek3: Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with NLG919 analogue
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.209 Å
Deposited: 2015-11-03
Authors: Peng, Y.H., Wu, J.S., Wu, S.Y.
PDB entry 5ek4: Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with NLG919 analogue
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2015-11-03
Authors: Wu, S.Y., Peng, Y.H., Wu, J.S.
PDB entry 5ek5: STRUCTURAL CHARACTERIZATION OF IRMA FROM ESCHERICHIA COLI
Classification: UNKNOWN FUNCTION
Source organism: Escherichia coli CFT073
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2015-11-03
Authors: Heras, B., Moriel, D.G., Paxman, J.J., Schembri, M.A.
PDB entry 5ek6: Thermostable aldehyde dehydrogenase from Pyrobaculum sp. 1860 complexed with NADP and isobutyraldehyde
Classification: OXIDOREDUCTASE
Source organism: Pyrobaculum sp. 1860
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2015-11-03
Authors: Petrova, T.E., Bezsudnova, E.Y., Boyko, K.M., Polyakov, K.M., Rakitina, T.V., Popov, V.O.
PDB entry 5ek7: Structure of the autoinhibited Epha2 JMS-KD
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2015-11-03
Authors: Wei, Q., Zheng, J.
PDB entry 5ek8: Crystal structure of a 9R-lipoxygenase from Cyanothece PCC8801 at 2.7 Angstroms
Classification: OXIDOREDUCTASE
Source organism: Cyanothece sp. (strain PCC 8801)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-11-03
Authors: Feussner, I., Ficner, R., Neumann, P., Newie, J., Andreou, A., Einsle, O.
PDB entry 5ek9: Crystal structure of the second bromodomain of human BRD2 in complex with a tetrahydroquinoline inhibitor
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2015-11-03
Authors: Tallant, C., Slavish, P.J., Siejka, P., Bharatham, N., Shadrick, W.R., Chai, S., Young, B.M., Boyd, V.A., Heroven, C., Picaud, S., Fedorov, O., Chen, T., Lee, R.E., Guy, R.K., Shelat, A.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 5eka: HU DNA-binding protein from Thermus thermophilus
Classification: DNA BINDING PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2015-11-03
Authors: Papageorgiou, A., Adam, P., Stavros, P., Nounesis, G., Meijers, R., Petratos, K., Vorgias, C.E.
PDB entry 5ekb: R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (reconstituted in solution)
Classification: OXIDOREDUCTASE
Source organism: Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.074 Å
Deposited: 2015-11-03
Authors: Griese, J.J., Hogbom, M.
PDB entry 5ekc: Thermostable aldehyde dehydrogenase from Pyrobaculum sp.1860 complexed with NADP+
Classification: OXIDOREDUCTASE
Source organism: Pyrobaculum sp. 1860
Experimental method: X-RAY DIFFRACTION
Resolution: 1.895 Å
Deposited: 2015-11-03
Authors: Petrova, T., Bezsudnova, E.Y., Boyko, K.M., Nikolaeva, A.Y., Rakitina, T.V., Shabalin, I.G., Popov, V.O.
PDB entry 5ekd: Human mitochondrial tryptophanyl-tRNA synthetase bound by indolmycin and Mn*ATP.
Classification: LIGASE/ANTIBIOTIC
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2015-11-03
Authors: Williams, T.L., Carter Jr., C.W.
PDB entry 5eke: Structure of the polyisoprenyl-phosphate glycosyltransferase GtrB (F215A mutant)
Classification: TRANSFERASE
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.001 Å
Deposited: 2015-11-03
Authors: Ardiccioni, C., Clarke, O.B., Tomasek, D., Banerjee, S., Rajashankar, K.R., Liu, Q., Shapiro, L., Mancia, F., New York Consortium on Membrane Protein Structure (NYCOMPS)
PDB entry 5ekf: Crystallization and X-ray Diffraction Data Collection of Importin-alpha from Mus musculus Complexed with a XPG NLS Peptide, fragment 1
Classification: PROTEIN BINDING
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-11-03
Authors: Barros, A.C., Takeda, A.A.S., Fontes, M.R.M.
PDB entry 5ekg: Crystallization and X-ray Diffraction Data Collection of Importin-alpha from Mus musculus Complexed with a XPG NLS Peptide, fragment 2
Classification: PROTEIN BINDING
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-11-03
Authors: Barros, A.C., Takeda, A.A.S., Fontes, M.R.M.
PDB entry 5ekh: Human Carbonic Anhydrase II complexed with a two-faced guest
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2015-11-03
Authors: Roose, B.W., Dmochowksi, I.J.
PDB entry 5eki: Crystal Structure of Truncated CCL21
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-11-03
Authors: Lewandowski, E.M., Smith, E.W., Chen, Y.
PDB entry 5ekj: Human Carbonic Anhydrase II complexed with a two-faced guest
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.129 Å
Deposited: 2015-11-03
Authors: Roose, B.W., Dmochowski, I.J.
PDB entry 5ekk: Crystal structure of Staphylococcal nuclease variant Delta+PHS V39D/L125E at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-11-03
Authors: Skerritt, L.A., Bell-Upp, P.C., Siegler, M.A., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 5ekl: Crystal structure of Staphylococcal nuclease variant Delta+PHS T62D/N100E at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-11-03
Authors: Skerritt, L.A., Bell-Upp, P.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 5ekm: Human Carbonic Anhydrase II complexed with a two-faced guest
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2015-11-03
Authors: Roose, B.W., Dmochowski, I.J.
PDB entry 5ekn: Crystal structure of MAPK13 complex with inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.594 Å
Deposited: 2015-11-03
Authors: Brett, T.J., Miller, C.A., Yurtsever, Z.
PDB entry 5eko: Crystal structure of MAPK13 complex with inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-11-03
Authors: Brett, T.J., Miller, C.A., Yurtsever, Z.
PDB entry 5ekp: Structure of the polyisoprenyl-phosphate glycosyltransferase GtrB (WT)
Classification: TRANSFERASE
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.194 Å
Deposited: 2015-11-03
Authors: Ardiccioni, C., Clarke, O.B., Tomasek, D., Banerjee, S., Rajashankar, K.R., Liu, Q., Shapiro, L., Mancia, F., New York Consortium on Membrane Protein Structure (NYCOMPS)
PDB entry 5ekq: The structure of the BamACDE subcomplex from E. coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.392 Å
Deposited: 2015-11-04
Authors: Bakelar, J., Buchanan, S.K., Noinaj, N.
PDB entry 5eks: Structure of 3-dehydroquinate synthase from Acinetobacter baumannii in complex with NAD
Classification: LYASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-11-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5ekt: Crystal structure of mutant-K146A of peptidyl-tRNA hydrolase from Vibrio cholerae at 1.63A resolution.
Classification: HYDROLASE
Source organism: Vibrio cholerae O1 biovar El Tor str. N16961
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2015-11-04
Authors: Shahid, S., Kabr, A., Pal, R.K., Arora, A.
PDB entry 5eku: Crystal Structure of Trypanosoma Brucei Protein Arginine Methyltransferase PRMT7 in complex with S-Adenosyl-L-homocysteine
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.801 Å
Deposited: 2015-11-04
Authors: Debler, E.W., Stavropoulos, P.
PDB entry 5ekv: Co-crystal structure of eIF4E with nucleotide mimetic inhibitor.
Classification: TRANSLATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.61 Å
Deposited: 2015-11-04
Authors: Nowicki, M.W., Walkinshaw, M.D., Fischer, P.M.
PDB entry 5ekw: A. thaliana IGPD2 in complex with the racemate of the triazole-phosphonate inhibitor, C348
Classification: LYASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2015-11-04
Authors: Bisson, C., Britton, K.L., Sedelnikova, S.E., Rodgers, H.F., Eadsforth, T.C., Viner, R.C., Hawkes, T.R., Baker, P.J., Rice, D.W.
PDB entry 5ekx: DENGUE 3 NS5 METHYLTRANSFERASE BOUND TO S-ADENOSYLMETHIONINE AND FRAGMENT NB2E11
Classification: TRANSFERASE
Source organism: Dengue virus type 3 (strain Philippines/H87/1956)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2015-11-04
Authors: Barral, K., Bricogne, G., Sharff, A.
PDB entry 5eky: Crystal structure of deoxyribose-phosphate aldolase from Escherichia coli (K58E-Y96W mutant)
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2015-11-04
Authors: Classen, T., Dick, M., Pietruszka, J., Weiergraeber, O.H.
PDB entry 5ekz: Crystal structure of mouse Taco1
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-11-04
Authors: Spahr, H., Richman, T.R., Larsson, N.G., Rackham, O., Filipovska, A.
PDB entry 5el0: Crystal structure of an Oxidoreductase (short chain dehydrogenase/reductase family) from Brucella ovis in complex with a partially ordered NAD
Classification: OXIDOREDUCTASE
Source organism: Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-11-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5el1: Crystal structure of deoxyribose-phosphate aldolase from Escherichia coli (K58E-Y96W mutant) after acetaldehyde treatment
Classification: LYASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2015-11-04
Authors: Weiergraeber, O.H., Dick, M., Pietruszka, J.
PDB entry 5el2: Crystal structure of Odorant Binding Protein 1 from Anopheles gambiae (AgamOBP1) with Icaridin (butan-2-yl 2-(2-hydroxyethyl)piperidine-1-carboxylate)
Classification: TRANSPORT PROTEIN
Source organism: Anopheles gambiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2015-11-04
Authors: Drakou, C.E., Tsitsanou, K.E., Zographos, S.E.
PDB entry 5el3: Structure of the KH domain of T-STAR
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2015-11-04
Authors: Dominguez, C., Feracci, M.
PDB entry 5el4: Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2015-11-04
Authors: Rozov, A., Demeshkina, N., Khusainov, I., Yusupov, M., Yusupova, G.
PDB entry 5el5: Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2015-11-04
Authors: Rozov, A., Demeshkina, N., Khusainov, I., Yusupov, M., Yusupova, G.
PDB entry 5el6: Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycin
Classification: RIBOSOME
Source organism: Escherichia coli  K-12; Escherichia coli K-12; Thermus thermophilus; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2015-11-04
Authors: Rozov, A., Demeshkina, N., Khusainov, I., Yusupov, M., Yusupova, G.
PDB entry 5el7: Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2015-11-04
Authors: Rozov, A., Demeshkina, N., Khusainov, I., Yusupov, M., Yusupova, G.
PDB entry 5el8: The structure of DHAR1 from Arabidopsis thaliana
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-11-04
Authors: Menault, M., Roszak, A.W., Lapthorn, A.J.
PDB entry 5el9: A. thaliana IGPD2 in complex with the triazole-phosphonate inhibitor, (S)-C348, to 1.1A resolution
Classification: LYASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2015-11-04
Authors: Bisson, C., Britton, K.L., Sedelnikova, S.E., Rodgers, H.F., Eadsforth, T.C., Viner, R.C., Hawkes, T.R., Baker, P.J., Rice, D.W.
PDB entry 5ela: The structure of DHAR1 from Arabidopsis thaliana
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2015-11-04
Authors: Menault, M., Roszak, A.W., Lapthorn, A.J.
PDB entry 5elb: Cholera toxin classical B-pentamer in complex with Lewis-y
Classification: TOXIN
Source organism: Vibrio cholerae O1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2015-11-04
Authors: Heggelund, J.E., Burschowsky, D., Krengel, U.
PDB entry 5elc: Cholera toxin El Tor B-pentamer in complex with Lewis-y
Classification: TOXIN
Source organism: Vibrio cholerae O1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-11-04
Authors: Heggelund, J.E., Burschowsky, D., Krengel, U.
PDB entry 5eld: Cholera toxin classical B-pentamer in complex with A Lewis-y
Classification: TOXIN
Source organism: Vibrio cholerae O1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2015-11-04
Authors: Heggelund, J.E., Burschowsky, D., Krengel, U.
PDB entry 5ele: Cholera toxin El Tor B-pentamer in complex with A Lewis-y
Classification: TOXIN
Source organism: Vibrio cholerae O1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-11-04
Authors: Heggelund, J.E., Burschowsky, D., Krengel, U.
PDB entry 5elf: Cholera toxin El Tor B-pentamer in complex with A-pentasaccharide
Classification: TOXIN
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2015-11-04
Authors: Heggelund, J.E., Burschowsky, D., Krengel, U.
PDB entry 5elg: The structure of DHAR1 from Arabidopsis thaliana
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2015-11-04
Authors: Menault, M., Roszak, A.W., Lapthorn, A.J.
PDB entry 5elh: Crystal structure of mouse Unkempt zinc fingers 1-3 (ZnF1-3), bound to RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-11-04
Authors: Teplova, M., Murn, J., Zarnack, K., Shi, Y., Patel, D.J.
PDB entry 5eli: Triggering receptor expressed on myeloid cells 2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.0977 Å
Deposited: 2015-11-04
Authors: Brett, T.J., Kober, D.L.
PDB entry 5elj: Isoform-specific inhibition of SUMO-dependent protein-protein interactions
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.983 Å
Deposited: 2015-11-04
Authors: Hughes, D.J., Tiede, C., Hall, N., Tang, A.A.S., Trinh, C.H., Zajac, K., Mandal, U., Howell, G., Edwards, T.A., McPherson, M.J., Tomlinson, D.C., Whitehouse, A.
PDB entry 5elk: Crystal structure of mouse Unkempt zinc fingers 4-6 (ZnF4-6), bound to RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-11-04
Authors: Teplova, M., Murn, J., Zarnack, K., Shi, Y., Patel, D.J.
PDB entry 5ell: Crystal structure of L-aspartate/glutamate-specific racemase from Escherichia coli
Classification: ISOMERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2015-11-04
Authors: Ahn, J.W., Chang, J.H., Kim, K.J.
PDB entry 5elm: Crystal structure of L-aspartate/glutamate specific racemase in complex with L-glutamate
Classification: ISOMERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-11-04
Authors: Ahn, J.W., Chang, J.H., Kim, K.J.
PDB entry 5eln: Crystal Structure of Lysyl-tRNA Synthetase from Cryptosporidium parvum complexed with L-lysine
Classification: LIGASE
Source organism: Cryptosporidium parvum (strain Iowa II)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-11-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5elo: Crystal Structure of Lysyl-tRNA Synthetase from Cryptosporidium parvum complexed with L-lysine and cladosporin
Classification: ligase/ligase inhibitor
Source organism: Cryptosporidium parvum (strain Iowa II)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-11-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5elp: Ketosynthase from module 1 of the bacillaene synthase from Bacillus amyloliquefaciens FZB42
Classification: HYDROLASE
Source organism: Bacillus amyloliquefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.93 Å
Deposited: 2015-11-04
Authors: Wagner, D.T., Gay, D.C., Keatinge-Clay, A.T., Zogzas, C.E.
PDB entry 5elq: Crystal structure of the SNX27 PDZ domain bound to the C-terminal DGKzeta PDZ binding motif
Classification: PROTEIN TRANSPORT
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2015-11-05
Authors: Collins, B.M., Clairfeuille, T.
PDB entry 5elr: Structure of the KH-QUA2 domain of T-STAR in complex with AAUAAU RNA
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-11-05
Authors: Dominguez, C., Feracci, M.
PDB entry 5els: Structure of the KH domain of T-STAR in complex with AAAUAA RNA
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.873 Å
Deposited: 2015-11-05
Authors: Dominguez, C., Feracci, M.
PDB entry 5elt: Structure of the QUA1-KH domain of T-STAR in complex with UAAU RNA
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2015-11-05
Authors: Dominguez, C., Feracci, M.
PDB entry 5elu: Isoform-specific inhibition of SUMO-dependent protein-protein interactions
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2015-11-05
Authors: Hughes, D.J., Tiede, C., Hall, N., Tang, A.A.S., Trinh, C.H., Zajac, K., Mandal, U., Howell, G., Edwards, T.A., McPherson, M.J., Tomlinson, D.C., Whitehouse, A.
PDB entry 5elv: Crystal structure of the GluA2 ligand-binding domain (S1S2J-L504-N775) in complex with glutamate and BPAM-521 at 1.92 A resolution
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2015-11-05
Authors: Krintel, C., Juknaite, L., Frydenvang, K., Kastrup, J.S.
PDB entry 5elw: A. thaliana IGPD2 in complex with the triazole-phosphonate inhibitor, (R)-C348, to 1.36A resolution
Classification: LYASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2015-11-05
Authors: Bisson, C., Britton, K.L., Sedelnikova, S.E., Rodgers, H.F., Eadsforth, T.C., Viner, R.C., Hawkes, T.R., Baker, P.J., Rice, D.W.
PDB entry 5elx: S. cerevisiae Dbp5 bound to RNA and mant-ADP BeF3
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae (strain YJM789)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2015-11-05
Authors: Merchant, M.K., Modis, Y.
PDB entry 5ely: X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a hydroxamate inhibitor JHU242
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2015-11-05
Authors: Barinka, C., Novakova, Z., Pavlicek, J.
PDB entry 5elz: Staphylococcus aureus Type II pantothenate kinase in complex with a pantothenate analog
Classification: Transferase/Transferase Inhibitor
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-11-05
Authors: Mottaghi, K., Hughes, S.J., Tempel, W., Hong, B., Park, H., Structural Genomics Consortium (SGC)
PDB entry 5em0: Crystal structure of mugwort allergen Art v 4
Classification: ALLERGEN
Source organism: Artemisia vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2015-11-05
Authors: Offermann, L.R., Perdue, M.L., Chruszcz, M.
PDB entry 5em1: Crystal structure of ragweed allergen Amb a 8
Classification: ALLERGEN
Source organism: Ambrosia artemisiifolia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2015-11-05
Authors: Offermann, L.R., He, J.Z., Perdue, M.L., Chruszcz, M.
PDB entry 5em2: Crystal structure of the Erb1-Ytm1 complex
Classification: RIBOSOME
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2015-11-05
Authors: Ahmed, Y.L., Sinning, I.
PDB entry 5em3: Crystal structure of the human BRPF1 bromodomain in complex with SEED9
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2015-11-05
Authors: Zhu, J., Caflisch, A.
PDB entry 5em4: Structure of CYP2B4 F244W in a ligand free conformation
Classification: OXIDOREDUCTASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2015-11-05
Authors: Shah, M.B., Stout, C.D., Halpert, J.R.
PDB entry 5em5: EGFR kinase domain mutant "TMLR" with pyridone compound 2: 4-[2-(4-chlorophenyl)ethylamino]-~{N}-[4-(4-methylpiperazin-1-yl)phenyl]-2-oxidanylidene-1~{H}-pyridine-3-carboxamide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-11-05
Authors: Eigenbrot, C., Yu, C.
PDB entry 5em6: EGFR kinase domain mutant "TMLR" with pyridone compound 19: 4-[(2-azanylpyrimidin-4-yl)amino]-~{N}-[4-(4-methylpiperazin-1-yl)phenyl]-2-oxidanylidene-1~{H}-pyridine-3-carboxamide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2015-11-05
Authors: Eigenbrot, C., Yu, C.
PDB entry 5em7: EGFR kinase domain mutant "TMLR" with pyridone compound 13: 4-[(2-methoxyphenyl)amino]-~{N}-[4-(4-methylpiperazin-1-yl)phenyl]-2-oxidanylidene-1~{H}-pyridine-3-carboxamide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2015-11-05
Authors: Eigenbrot, C., Yu, C.
PDB entry 5em8: EGFR kinase domain with pyridone compound 13: 4-[(2-methoxyphenyl)amino]-~{N}-[4-(4-methylpiperazin-1-yl)phenyl]-2-oxidanylidene-1~{H}-pyridine-3-carboxamide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-11-05
Authors: Eigenbrot, C., Yu, C.