LiteFold/PDB huggingface dataset:
PDB entry 6gv0: Insulin glulisine
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2018-06-20
Authors: Chayen, N.E., Helliwell, J.R., Solomon-Gamsu, H.V., Govada, L., Morgan, M., Gillis, R.B., Adams, G.
PDB entry 6gv1: Crystal structure of E.coli Multidrug/H+ antiporter MdfA in outward open conformation with bound Fab fragment
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2018-06-20
Authors: Nagarathinam, K., Parthier, C., Stubbs, M.T., Tanabe, M.
PDB entry 6gv2: Sulfolobus solfataricus 2-keto-3-deoxygluconate aldolase Y103F,Y130F,A198F variant in complex with L-2-keto, 3-deoxy-galactonate
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.101 Å
Deposited: 2018-06-20
Authors: Crennell, S.J., Danson, M.J., Royer, S.
PDB entry 6gv3: Structure of the E2 conjugating enzyme, SCE1, from Arabidopsis thaliana.
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.201 Å
Deposited: 2018-06-20
Authors: Liu, B., Lois, L.M., Reverter, D.
PDB entry 6gv4: High-resolution Cryo-EM of Fab-labeled human parechovirus 3
Classification: VIRUS
Source organism: Homo sapiens; Human parechovirus 3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2018-06-20
Authors: Domanska, A., Flatt, J.W., Jukonen, J.J.J., Geraets, J.A., Butcher, S.J.
PDB entry 6gv5: Characterization of extracellular matrix binding protein- (Embp)-mediated Staphylococcus epidermidis adherence to fibronectin
Classification: CELL ADHESION
Source organism: Staphylococcus epidermidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-06-20
Authors: Buettner, H., Rohde, H., Perbandt, M.
PDB entry 6gv6: Cadmium(II) form of shortened metallothionein from Pseudomonas fluorescens Q2-87 (residues: 1-52)
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas fluorescens Q2-87
Experimental method: SOLUTION NMR
Deposited: 2018-06-20
Authors: Habjanic, J., Zerbe, O., Freisinger, E.
PDB entry 6gv7: Cadmium(II) form of A44H mutant of shortened metallothionein from Pseudomonas fluorescens Q2-87 (residues 1-52)
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas fluorescens Q2-87
Experimental method: SOLUTION NMR
Deposited: 2018-06-20
Authors: Habjanic, J., Zerbe, O., Freisinger, E.
PDB entry 6gv8: Characterization of extracellular matrix binding protein- (Embp)-mediated Staphylococcus epidermidis adherence to fibronectin
Classification: CELL ADHESION
Source organism: Staphylococcus epidermidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.394 Å
Deposited: 2018-06-20
Authors: Buettner, H., Rohde, H., Perbandt, M.
PDB entry 6gv9: Structure of the type IV pilus from enterohemorrhagic Escherichia coli (EHEC)
Classification: PROTEIN FIBRIL
Source organism: Escherichia coli O157:H7
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2018-06-20
Authors: Bardiaux, B., Amorim, G.C., Luna-Rico, A., Zheng, W., Guilvout, I., Jollivet, C., Nilges, M., Egelman, E., Francetic, O., Izadi-Pruneyre, N.
PDB entry 6gva: CDK2/cyclin A2 in complex with pyrazolo[4,3-d]pyrimidine inhibitor LGR4455
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-06-20
Authors: Skerlova, J., Rezacova, P.
PDB entry 6gvb: Crystal structure of Cutibacterium acnes exo-beta-1,4-mannosidase
Classification: HYDROLASE
Source organism: Cutibacterium acnes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-06-20
Authors: Reichenbach, T., Divne, C.
PDB entry 6gvc: Structure of ArhGAP12 bound to G-Actin
Classification: HYDROLASE
Source organism: Mus musculus; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-06-20
Authors: Mouilleron, S., Treisman, R., Diring, J.
PDB entry 6gvd: Alpha-galactosidase from Thermotoga maritima in complex with cyclohexene-based carbasugar mimic of galactose
Classification: HYDROLASE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2018-06-20
Authors: Gloster, T.M., Pengelly, R.J.
PDB entry 6gve: GAPDH-CP12-PRK complex
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus (strain BP-1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2018-06-20
Authors: McFarlane, C.R., Shah, N., Bubeck, D., Murray, J.W.
PDB entry 6gvf: Crystal structure of PI3K alpha in complex with 3-(2-Amino-benzooxazol-5-yl)-1-isopropyl-1H-pyrazolo[3,4-d]pyrimidin-4-ylamine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-06-21
Authors: Ouvry, G., Aurelly, M., Bonnary, L., Borde, E., Bouix-Peter, C., Chantalat, L., Clary, L., Defoin-Platel, C., Deret, S., Forissier, M., Harris, C.S., Isabet, T., Lamy, L., Luzy, A.P., Pascau, J., Soulet, C., Taddei, A., Taquet, N., Tomas, L., Thoreau, E., Varvier, E., Vial, E., Hennequin, L.F.
PDB entry 6gvg: Crystal structure of PI3K alpha in complex with 3-(2-Amino-benzooxazol-5-yl)-1-isopropyl-4-methyl-1H-pyrazolo[3,4-d]pyrimidin-6-ylamine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2018-06-21
Authors: Ouvry, G., Aurelly, M., Bonnary, L., Borde, E., Bouix-Peter, C., Chantalat, L., Clary, L., Defoin-Platel, C., Deret, S., Forissier, M., Harris, C.S., Isabet, T., Lamy, L., Luzy, A.P., Pascau, J., Soulet, C., Taddei, A., Taquet, N., Tomas, L., Thoreau, E., Varvier, E., Vial, E., Hennequin, L.F.
PDB entry 6gvh: Crystal structure of PI3K alpha in complex with 3-(2-Amino-benzooxazol-5-yl)-4-chloro-1-isopropyl-1H-pyrazolo[3,4-d]pyrimidin-6-ylamine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2018-06-21
Authors: Ouvry, G., Aurelly, M., Bonnary, L., Borde, E., Bouix-Peter, C., Chantalat, L., Clary, L., Defoin-Platel, C., Deret, S., Forissier, M., Harris, C.S., Isabet, T., Lamy, L., Luzy, A.P., Pascau, J., Soulet, C., Taddei, A., Taquet, N., Tomas, L., Thoreau, E., Varvier, E., Vial, E., Hennequin, L.F.
PDB entry 6gvi: Crystal structure of PI3K alpha in complex with 3-(2-Amino-benzooxazol-5-yl)-1-isopropyl-1H-pyrazolo[3,4-d]pyrimidine-4,6-diamine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-06-21
Authors: Ouvry, G., Aurelly, M., Bonnary, L., Borde, E., Bouix-Peter, C., Chantalat, L., Clary, L., Defoin-Platel, C., Deret, S., Forissier, M., Harris, C.S., Isabet, T., Lamy, L., Luzy, A.P., Pascau, J., Soulet, C., Taddei, A., Taquet, N., Tomas, L., Thoreau, E., Varvier, E., Vial, E., Hennequin, L.F.
PDB entry 6gvj: Human Mps1 kinase domain with ordered activation loop
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2018-06-21
Authors: Roorda, J.C., Hiruma, Y., Joosten, R.P., Perrakis, A.
PDB entry 6gvk: Second pair of Fibronectin type III domains of integrin beta4 (T1663R mutant) bound to the bullous pemphigoid antigen BP230 (BPAG1e)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2018-06-21
Authors: Manso, J.A., Gomez-Hernandez, M., Alonso-Garcia, N., de Pereda, J.M.
PDB entry 6gvl: Second pair of Fibronectin type III domains of integrin beta4 bound to the bullous pemphigoid antigen BP230 (BPAG1e)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-06-21
Authors: Manso, J.A., Gomez-Hernandez, M., Alonso-Garcia, N., de Pereda, J.M.
PDB entry 6gvm: Tubulin:F3II DARPin complex
Classification: CELL CYCLE
Source organism: Ovis aries; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-06-21
Authors: Gigant, B., Campanacci, V., Cantos Fernandes, S.
PDB entry 6gvn: Tubulin:TM-3 DARPin complex
Classification: CELL CYCLE
Source organism: Ovis aries; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2018-06-21
Authors: Gigant, B., Cantos Fernandes, S., Campanacci, V.
PDB entry 6gvp: TAILSPIKE PROTEIN MUTANT E372Q (DELTA N471/S472) OF E. COLI BACTERIOPHAGE HK620 IN COMPLEX WITH HEXASACCHARIDE
Classification: VIRAL PROTEIN
Source organism: Salmonella phage HK620
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2018-06-21
Authors: Roske, Y., Gohlke, U.
PDB entry 6gvq: DNA-bound pRN1 helix bundle domain with ATP and magnesium in the interaction buffer
Classification: DNA BINDING PROTEIN
Source organism: Sulfolobus islandicus; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2018-06-21
Authors: Boudet, J., Lipps, G., Allain, F.H.-T.
PDB entry 6gvr: TAILSPIKE PROTEIN MUTANT E372Q (DELTA N471/S472) OF E. COLI BACTERIOPHAGE HK620 IN COMPLEX WITH PENTASACCHARIDE
Classification: VIRAL PROTEIN
Source organism: Salmonella phage HK620
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-06-21
Authors: Roske, Y., Gohlke, U.
PDB entry 6gvs: Engineered glycolyl-CoA reductase comprising 8 mutations with bound NADP+
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris BisB18
Experimental method: X-RAY DIFFRACTION
Resolution: 2.579 Å
Deposited: 2018-06-21
Authors: Zarzycki, J., Trudeau, D., Scheffen, M., Erb, T.J., Tawfik, D.S.
PDB entry 6gvt: Hybrid structure of the pRN1 helix bundle domain in complex with DNA and 2 ATP molecules
Classification: DNA BINDING PROTEIN
Source organism: Sulfolobus islandicus; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR, SOLID-STATE NMR
Deposited: 2018-06-21
Authors: Boudet, J., Wiegand, T., Meier, B.H., Lipps, G., Allain, F.H.-T.
PDB entry 6gvu: NMR structure of the DNA-bound helix bundle domain from the functional pRN1 primase
Classification: DNA BINDING PROTEIN
Source organism: Sulfolobus islandicus; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2018-06-21
Authors: Boudet, J., Lipps, G., Allain, F.H.-T.
PDB entry 6gvv: Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus
Classification: VIRAL PROTEIN
Source organism: Foot-and-mouth disease virus - type C
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2018-06-21
Authors: Verdaguer, N., Ferrer Orta, C.
PDB entry 6gvw: Crystal structure of the BRCA1-A complex
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.75 Å
Deposited: 2018-06-21
Authors: Bunker, R.D., Rabl, J., Thoma, N.H.
PDB entry 6gvx: Crystal structure of Maternal Embryonic Leucine Zipper Kinase (MELK) in complex with dorsomorphin (Compound C)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2018-06-21
Authors: Golik, P., Rembacz, K.P., Zrubek, K., Romanowska, M., Bugusz, J., Wladyka, B., Dubin, G.
PDB entry 6gvy: Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with an template -primer RNA
Classification: VIRAL PROTEIN
Source organism: Foot-and-mouth disease virus - type C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-06-21
Authors: Verdaguer, N., Ferrer-Orta, C.
PDB entry 6gvz: GII.1 human norovirus protruding domain in complex with glycochenodeoxycholate (GCDCA)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII.1/7EK/Hawaii/1971/USA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2018-06-21
Authors: Kilic, T., Hansman, G.S.
PDB entry 6gw0: GII.1 human norovirus protruding domain in complex with taurochenodeoxycholate (TCDCA)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII.1/7EK/Hawaii/1971/USA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2018-06-21
Authors: Kilic, T., Hansman, G.S.
PDB entry 6gw1: GII.10 human norovirus protruding domain in complex with glycochenodeoxycholate (GCDCA)
Classification: VIRAL PROTEIN
Source organism: Norwalk virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-06-21
Authors: Kilic, T., Hansman, G.S.
PDB entry 6gw2: GII.10 human norovirus protruding domain in complex with taurochenodeoxycholate (TCDCA)
Classification: VIRAL PROTEIN
Source organism: Norwalk virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-06-21
Authors: Kilic, T., Hansman, G.S.
PDB entry 6gw3: Structure of TKS from Cannabis sativa in complex with CoA
Classification: LIGASE
Source organism: Cannabis sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2018-06-21
Authors: Karuppiah, V., Leys, D.
PDB entry 6gw4: GII.22 human norovirus protruding domain in complex with glycochenodeoxycholate (GCDCA)
Classification: VIRAL PROTEIN
Source organism: Norwalk-like virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.295 Å
Deposited: 2018-06-21
Authors: Kilic, T., Hansman, G.S.
PDB entry 6gw5: X-ray structure of the Helicobacter pylori SabA adhesin domain
Classification: CELL ADHESION
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2018-06-21
Authors: Coppens, F., Remaut, H.
PDB entry 6gw6: Structure of the Pseudomonas putida RES-Xre toxin-antitoxin complex
Classification: TOXIN
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.205 Å
Deposited: 2018-06-22
Authors: Senissar, M., Brodersen, D.E.
PDB entry 6gw7: The CTD of HpDprA, a DNA binding Winged Helix domain which do not bind dsDNA
Classification: DNA BINDING PROTEIN
Source organism: Helicobacter pylori
Experimental method: SOLUTION NMR
Deposited: 2018-06-22
Authors: Lisboa, J., Celma, L., Sanchez, D., Marquis, M., Andreani, J., Guerois, R., Ochsenbein, F., Durand, D., Marsin, S., Cuniasse, P., Radicella, J.P., Quevillon-Cheruel, S.
PDB entry 6gw8: Zn(II) form of shortened metallothionein from Pseudomonas fluorescens Q2-87 (residues 1-52)
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas fluorescens Q2-87
Experimental method: SOLUTION NMR
Deposited: 2018-06-22
Authors: Habjanic, J., Zerbe, O., Freisinger, E.
PDB entry 6gw9: Concanavalin A structure determined with data from the EuXFEL, the first MHz free electron laser
Classification: SUGAR BINDING PROTEIN
Source organism: Canavalia cathartica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-06-22
Authors: Gruenbein, M.L., Gorel, A., Stricker, M., Bean, R., Bielecki, J., Doerner, K., Hartmann, E., Hilpert, M., Kloos, M., Letrun, R., Sztuk-Dambietz, J., Mancuso, A., Meserschmidt, M., Nass-Kovacs, G., Ramilli, M., Roome, C.M., Sato, T., Doak, R.B., Shoeman, R.L., Foucar, L., Colletier, J.P., Barends, T.R.M., Stan, C., Schlichting, I.
PDB entry 6gwa: Concanavalin B structure determined with data from the EuXFEL, the first MHz free electron laser
Classification: SUGAR BINDING PROTEIN
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-06-22
Authors: Gruenbein, M.L., Gorel, A., Stricker, M., Bean, R., Bielecki, J., Doerner, K., Hartmann, E., Hilpert, M., Kloos, M., Letrun, R., Sztuk-Dambietz, J., Mancuso, A., Meserschmidt, M., Nass-Kovacs, G., Ramilli, M., Roome, C.M., Sato, T., Doak, R.B., Shoeman, R.L., Foucar, L., Colletier, J.P., Barends, T.R.M., Stan, C., Schlichting, I.
PDB entry 6gwb: Molybdenum storage protein without polyoxomolybdate clusters
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-06-22
Authors: Ermler, U.
PDB entry 6gwc: Tubulin:iE5 alphaRep complex
Classification: CELL CYCLE
Source organism: Ovis aries; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-06-22
Authors: Gigant, B., Campanacci, V.
PDB entry 6gwd: Tubulin:iiH5 alphaRep complex
Classification: CELL CYCLE
Source organism: Ovis aries; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-06-22
Authors: Gigant, B., Campanacci, V.
PDB entry 6gwe: Crystal structure of Thrombin bound to P2 macrocycle
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-06-23
Authors: Cendron, L., Angelini, A., Kale, S.S., Bergeron-Brlek, M., Wu, Y., Heinis, C.
PDB entry 6gwf: Alpha-galactosidase mutant D387A from Thermotoga maritima in complex with intact cyclohexene-based carbasugar mimic of galactose with 2,4-dinitro leaving group
Classification: HYDROLASE
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2018-06-24
Authors: Gloster, T.M., Oehler, V.
PDB entry 6gwg: Alpha-galactosidase from Thermotoga maritima in complex with cyclohexene-based carbasugar mimic of galactose covalently linked to the nucleophile
Classification: HYDROLASE
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2018-06-24
Authors: Gloster, T.M., Oehler, V.
PDB entry 6gwh: Outward-facing conformation of a multidrug resistance MATE family transporter of the MOP superfamily.
Classification: MEMBRANE PROTEIN
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-06-25
Authors: Zakrzewska, S., Safarian, S., Michel, H.
PDB entry 6gwi: The crystal structure of Halomonas elongata amino-transferase
Classification: TRANSFERASE
Source organism: Halomonas elongata DSM 2581
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-06-25
Authors: Gourlay, L.J.
PDB entry 6gwj: Human OSGEP / LAGE3 / GON7 complex
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-06-25
Authors: Missoury, S., Liger, D., Durand, D., Collinet, B., Tilbeurgh, V.H.
PDB entry 6gwk: The crystal structure of Hfq from Caulobacter crescentus
Classification: RNA BINDING PROTEIN
Source organism: Caulobacter vibrioides CB15
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-06-25
Authors: Santiago-Frangos, A., Frohlich, K.S., Jeliazkov, J.R., Gray, J.R., Luisi, B.F., Woodson, S.A., Hardwick, S.W.
PDB entry 6gwm: Solution structure of rat RIP2 caspase recruitment domain
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: SOLUTION NMR
Deposited: 2018-06-25
Authors: Mineev, K.S., Goncharuk, S.A., Artemieva, L.E., Arseniev, A.S.
PDB entry 6gwn: Crystal Structure of Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-W175F) in Complex with Two Inhibitory Nanobodies (VHH-2g-42, VHH-2w-64)
Classification: HYDROLASE
Source organism: Homo sapiens; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2018-06-25
Authors: Sillen, M., Weeks, S.D., Strelkov, S.V., Declerck, P.J.
PDB entry 6gwp: Crystal Structure of Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-stab) in Complex with Two Inhibitory Nanobodies (VHH-2g-42, VHH-2w-64)
Classification: HYDROLASE
Source organism: Homo sapiens; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2018-06-25
Authors: Sillen, M., Weeks, S.D., Strelkov, S.V., Declerck, P.J.
PDB entry 6gwq: Crystal Structure of Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-stab) in Complex with an Inhibitory Nanobody (VHH-2g-42)
Classification: HYDROLASE
Source organism: Homo sapiens; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2018-06-25
Authors: Sillen, M., Weeks, S.D., Strelkov, S.V., Declerck, P.J.
PDB entry 6gwr: Structure of the kinase domain of human DDR1 in complex with a potent and selective inhibitor of DDR1 and DDR2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2018-06-25
Authors: Pinkas, D.M., Fox, A.E., Kupinska, K., Burgess-Brown, N.A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bullock, A.N.
PDB entry 6gws: Crystal structure of human PCNA in complex with three p15 peptides
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2018-06-25
Authors: De March, M., Merino, N., Gonzalez-Magana, A., Romano-Moreno, M., Onesti, S., Blanco, F.J., De Biasio, A.
PDB entry 6gwt: Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2018-06-25
Authors: Graf, M., Huter, P., Maracci, C., Peterek, M., Rodnina, M.V., Wilson, D.N.
PDB entry 6gwu: Carbonic anhydrase CaNce103p from Candida albicans
Classification: LYASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-06-26
Authors: Brynda, J., Dostal, J., Heidingsfeld, O., Machacek, S., Blaha, J., Pichova, I.
PDB entry 6gwv: Molybdenum storage protein without polymolybdate clusters and ATP
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-06-26
Authors: Ermler, U., Poppe, J., Bruenle, S.
PDB entry 6gwx: Stabilising and Understanding a Miniprotein by Rational Design.
Classification: STRUCTURAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2018-06-26
Authors: Porter Goff, K.L., Williams, C., Baker, E.G., Nicol, D., Samphire, J.L., Zieleniewski, F.L., Crump, M.P., Woolfson, D.N.
PDB entry 6gwy: Blood group synthase AAGlyB in its apo form cryoprotected with glycerol
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2018-06-26
Authors: Rocha, J., Royant, A.
PDB entry 6gwz: Blood group synthase AAGlyB in its apo form cryoprotected with PEG 3350
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2018-06-26
Authors: Rocha, J., Royant, A.
PDB entry 6gx0: Blood group synthase AAGlyB in complex with UDP-Gal and cryoprotected with PEG 3350
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2018-06-26
Authors: Rocha, J., Royant, A.
PDB entry 6gx1: Blood group synthase AAGlyB in complex with UDP-GalNAc and cryoprotected with PEG 3350
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-06-26
Authors: Rocha, J., Royant, A.
PDB entry 6gx2: Blood group synthase AAGlyB in complex with UDP-GalNAc and cryoprotected with glycerol
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2018-06-26
Authors: Rocha, J., Royant, A.
PDB entry 6gx3: Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 1
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-06-26
Authors: Shaik, T.B., Marek, M., Romier, C.
PDB entry 6gx4: The molybdenum storage protein: with ATP/Mn2+ and with POM clusters formed under in vitro conditions
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-06-26
Authors: Poppe, J., Bruenle, S., Hail, R., Ermler, E.
PDB entry 6gx5: Narrow Pick Filament from Pick's disease brain
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2018-06-26
Authors: Falcon, B., Zhang, W., Murzin, A.G., Murshudov, G., Garringer, H.J., Vidal, R., Crowther, R.A., Ghetti, B., Scheres, S.H.W., Goedert, M.
PDB entry 6gx6: Crystal structure of IMP3 RRM12 in complex with RNA (ACAC)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-06-26
Authors: Jia, M., Gut, H., Chao, A.J.
PDB entry 6gx7: Tubulin-CopN-alphaRep complex
Classification: CELL CYCLE
Source organism: Chlamydia pneumoniae; Ovis aries; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2018-06-26
Authors: Gigant, B., Campanacci, V.
PDB entry 6gx8: Alpha-galactosidase from Thermotoga maritima in complex with hydrolysed cyclohexene-based carbasugar mimic of galactose
Classification: HYDROLASE
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2018-06-26
Authors: Gloster, T.M., Oehler, V.
PDB entry 6gx9: Crystal structure of the TNPO3 - CPSF6 RSLD complex
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-06-26
Authors: Cherepanov, P., Cook, N.
PDB entry 6gxa: Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 2
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-06-27
Authors: Shaik, T.B., Marek, M., Romier, C.
PDB entry 6gxb: Carbonic Anhydrase CAIX mimic in complex with inhibitor JS13
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2018-06-27
Authors: Brynda, J., Rezacova, P., Pospisilova, K.
PDB entry 6gxc: Bacterial oligosaccharyltransferase PglB in complex with an inhibitory peptide and a reactive lipid-linked oligosaccharide analog
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060); Campylobacter lari RM2100
Experimental method: X-RAY DIFFRACTION
Resolution: 3.401 Å
Deposited: 2018-06-27
Authors: Napiorkowska, M., Locher, K.P., Boilevin, J., Darbre, T., Reymond, J.-L.
PDB entry 6gxd: The hit-and-return system enables efficient time-resolved serial synchrotron crystallography: FAcD752MS after reaction initiation
Classification: DNA BINDING PROTEIN
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-06-27
Authors: Schulz, E.C., Mehrabi, P., Mueller-Werkmeister, H., Tellkamp, F., Stuart, W., Persch, E., De Gasparo, R., Diederich, F., Pai, E.F., Miller, R.J.D.
PDB entry 6gxe: Carbonic Anhydrase CAIX mimic in complex with inhibitor JS14
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2018-06-27
Authors: Brynda, J., Rezacova, P., Pospisilova, K.
PDB entry 6gxf: The hit-and-return system enables efficient time-resolved serial synchrotron crystallography: RADDAM1
Classification: HYDROLASE
Source organism: Rhodopseudomonas palustris CGA009
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-06-27
Authors: Schulz, E.C., Mehrabi, P., Mueller-Werkmeister, H., Tellkamp, F., Stuart, W., Persch, E., De Gasparo, R., Diederich, F., Pai, E.F., Miller, R.J.D.
PDB entry 6gxg: Tryparedoxin from Trypanosoma brucei in complex with CFT
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-06-27
Authors: Bader, N., Wagner, A., Hellmich, U., Schindelin, H.
PDB entry 6gxh: The hit-and-return system enables efficient time-resolved serial synchrotron crystallography: FAcD 0MS after reaction initiation
Classification: HYDROLASE
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.802 Å
Deposited: 2018-06-27
Authors: Schulz, E.C., Mehrabi, P., Mueller-Werkmeister, H., Tellkamp, F., Stuart, W., Persch, E., De Gasparo, R., Diederich, F., Pai, E.F., Miller, R.J.D.
PDB entry 6gxj: X-ray structure of DiRu-1-encapsulated Apoferritin
Classification: METAL TRANSPORT
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2018-06-27
Authors: Pica, A., Ferraro, G., Merlino, A.
PDB entry 6gxk: Crystal structure of Aldo-Keto Reductase 1C3 (AKR1C3) complexed with inhibitor.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-06-27
Authors: Goyal, P., Wahlgren, W.Y., Friemann, R.
PDB entry 6gxl: The hit-and-return system enables efficient time-resolved serial synchrotron crystallography: RADDAM2
Classification: HYDROLASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-06-27
Authors: Schulz, E.C., Mehrabi, P., Mueller-Werkmeister, H., Tellkamp, F., Stuart, W., Persch, E., De Gasparo, R., Diederich, F., Pai, E.F., Miller, R.J.D.
PDB entry 6gxm: Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2018-06-27
Authors: Graf, M., Huter, P., Maracci, C., Peterek, M., Rodnina, M.V., Wilson, D.N.
PDB entry 6gxn: Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2018-06-27
Authors: Graf, M., Huter, P., Maracci, C., Peterek, M., Rodnina, M.V., Wilson, D.N.
PDB entry 6gxo: Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2018-06-27
Authors: Graf, M., Huter, P., Maracci, C., Peterek, M., Rodnina, M.V., Wilson, D.N.
PDB entry 6gxp: Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2018-06-27
Authors: Graf, M., Huter, P., Maracci, C., Peterek, M., Rodnina, M.V., Wilson, D.N.
PDB entry 6gxq: Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-1335
Classification: HYDROLASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2018-06-27
Authors: Singh, A.K., Brown, D.G.
PDB entry 6gxr: Crystal structure of BP39L lectin from Burkholderia pseudomallei at 1.7 A resolution
Classification: SUGAR BINDING PROTEIN
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-06-27
Authors: Sykorova, P., Novotna, J., Demo, G., Pompidor, G., Dubska, E., Komarek, J., Fujdiarova, E., Haronikova, L., Varrot, A., Imberty, A., Shilova, N., Bovin, N., Pokorna, M., Wimmerova, M.
PDB entry 6gxs: Crystal structure of CV39L lectin from Chromobacterium violaceum at 1.8 A resolution
Classification: SUGAR BINDING PROTEIN
Source organism: Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-06-27
Authors: Sykorova, P., Novotna, J., Demo, G., Pompidor, G., Dubska, E., Komarek, J., Fujdiarova, E., Haronikova, L., Varrot, A., Imberty, A., Shilova, N., Bovin, N., Pokorna, M., Wimmerova, M.
PDB entry 6gxt: The hit-and-return system enables efficient time-resolved serial synchrotron crystallography: FAcD2052MS after reaction initiation
Classification: DNA BINDING PROTEIN
Source organism: Rhodopseudomonas palustris CGA009
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-06-27
Authors: Schulz, E.C., Mehrabi, P., Mueller-Werkmeister, H., Tellkamp, F., Stuart, W., Persch, E., De Gasparo, R., Diederich, F., Pai, E.F., Miller, R.J.D.
PDB entry 6gxu: Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 3
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.917 Å
Deposited: 2018-06-27
Authors: Shaik, T.B., Marek, M., Romier, C.
PDB entry 6gxv: Amylase in complex with acarbose
Classification: HYDROLASE
Source organism: Alicyclobacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2018-06-27
Authors: Agirre, J., Moroz, O., Meier, S., Brask, J., Munch, A., Hoff, T., Andersen, C., Wilson, K.S., Davies, G.J.
PDB entry 6gxw: Crystal structure of Schistosoma mansoni HDAC8 complexed with an hydroxamate 4
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.071 Å
Deposited: 2018-06-27
Authors: Shaik, T.B., Marek, M., Romier, C.
PDB entry 6gxx: Fab fragment of an antibody selective for alpha-1-antitrypsin in the native conformation
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-06-27
Authors: Elliston, E.L.K., Miranda, E., Perez, J., Lomas, D.A., Irving, J.A.
PDB entry 6gxy: Tryparedoxin from Trypanosoma brucei in complex with CFT
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-06-27
Authors: Bader, N., Wagner, A., Hellmich, U., Schindelin, H.
PDB entry 6gxz: Crystal structure of the human RPAP3(TPR2)-PIH1D1(CS) complex
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.965 Å
Deposited: 2018-06-27
Authors: Henri, J., Quinternet, M., Manival, X., Chagot, M.-E., Charpentier, B., Meyer, P.
PDB entry 6gy0: mPI3Kd IN COMPLEX WITH AZ3
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2018-06-27
Authors: Petersen, J.
PDB entry 6gy1: rat COMT in complex with inhibitor
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-06-27
Authors: Schulze, M.-S.
PDB entry 6gy2: Crystal structure of human Plk1-PBD in complex with WSSSLATPPTLSSpTVLI phosphopeptide from BRCA2
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2018-06-28
Authors: Miron, S., Ropars, V., Zinn-Justin, S.
PDB entry 6gy3: Crystal Structure of C. glutamicum AmtR bound to glnA operator DNA
Classification: TRANSCRIPTION
Source organism: Corynebacterium glutamicum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2018-06-28
Authors: Sevvana, M., Muller, Y.A.
PDB entry 6gy4: Crystal structure of the N-terminal KH domain of human BICC1
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.986 Å
Deposited: 2018-06-28
Authors: Newman, J.A., Katis, V.L., Shrestha, L., Burgess-Brown, N., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Gileadi, O.
PDB entry 6gy5: Crystal structure of the kelch domain of human KLHL20 in complex with DAPK1 peptide
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.086 Å
Deposited: 2018-06-28
Authors: Chen, Z., Hozjan, V., Strain-Damerell, C., Williams, E., Wang, D., Cooper, C.D.O., Sanvitale, C.E., Fairhead, M., Carpenter, E.P., Pike, A.C.W., Krojer, T., Srikannathasan, V., Sorrell, F., Johansson, C., Mathea, S., Burgess-Brown, N., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bullock, A.N.
PDB entry 6gy6: XaxAB pore complex from Xenorhabdus nematophila
Classification: TOXIN
Source organism: Xenorhabdus nematophila ATCC 19061
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2018-06-28
Authors: Schubert, E., Raunser, S.
PDB entry 6gy7: Crystal structure of XaxB from Xenorhabdus nematophil
Classification: TOXIN
Source organism: Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2018-06-28
Authors: Schubert, E., Raunser, S., Vetter, I.R., Prumbaum, D., Penczek, P.A.
PDB entry 6gy8: Crystal structure of XaxA from Xenorhabdus nematophila
Classification: TOXIN
Source organism: Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-06-28
Authors: Schubert, E., Raunser, S.
PDB entry 6gy9: Fucose-functionalized precision glycomacromolecules targeting human norovirus capsid protein
Classification: VIRAL PROTEIN
Source organism: Norwalk virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-06-28
Authors: Ruoff, K., Kilic, T., Hansman, G.S.
PDB entry 6gya: Amylase in complex with branched ligand
Classification: HYDROLASE
Source organism: Alicyclobacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2018-06-28
Authors: Agirre, J., Moroz, O., Meier, S., Brask, J., Munch, A., Hoff, T., Andersen, C., Wilson, K.S., Davies, G.J.
PDB entry 6gyb: Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri
Classification: MEMBRANE PROTEIN
Source organism: Xanthomonas axonopodis pv. citri (strain 306)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2018-06-28
Authors: Sgro, G.G., Costa, T.R.D., Farah, C.S., Waksman, G.
PDB entry 6gye: Crystal structure of NadR protein in complex with NR
Classification: TRANSPORT PROTEIN
Source organism: Lactococcus lactis subsp. cremoris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-06-29
Authors: Singh, R., Stetsenko, A., Jaehme, M., Guskov, A., Slotboom, D.J.
PDB entry 6gyf: Crystal structure of NadR protein in complex with NR
Classification: TRANSPORT PROTEIN
Source organism: Lactococcus lactis subsp. cremoris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-06-29
Authors: Singh, R., Stetsenko, A., Jaehme, M., Guskov, A., Slotboom, D.J.
PDB entry 6gyg: X-ray structure of the apo form of the establishement gene regulator Reg576 of the G+ plasmid p576
Classification: TRANSCRIPTION
Source organism: Bacillus altitudinis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2018-06-29
Authors: Crespo, I., Meijer, W.J.J., Boer, D.R.
PDB entry 6gyh: Crystal structure of the light-driven proton pump Coccomyxa subellipsoidea Rhodopsin CsR
Classification: PROTON TRANSPORT
Source organism: Coccomyxa subellipsoidea C-169
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-06-29
Authors: Szczepek, M., Schmidt, A., Scheerer, P.
PDB entry 6gyi: Azurin fom Pseudomonas aeruginosa treated with hydrosulfide
Classification: ELECTRON TRANSPORT
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2018-06-29
Authors: Palm, G.J., Kohlhause, D.
PDB entry 6gyj: Mouse thymidylate synthase crystal soaked in phenolphthalein
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-06-30
Authors: Maj, P., Jarmula, A., Wilk, P., Weiss, M.S., Rode, W.
PDB entry 6gyk: Structure of a yeast closed complex (core CC1)
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.1 Å
Deposited: 2018-06-30
Authors: Dienemann, C., Schwalb, B., Schilbach, S., Cramer, P.
PDB entry 6gyl: Structure of a yeast closed complex with distorted DNA (core CCdist)
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2018-06-30
Authors: Dienemann, C., Schwalb, B., Schilbach, S., Cramer, P.
PDB entry 6gym: Structure of a yeast closed complex with distorted DNA (CCdist)
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2018-06-30
Authors: Dienemann, C., Schwalb, B., Schilbach, S., Cramer, P.
PDB entry 6gyn: Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2018-06-30
Authors: Shintre, C.A., Pike, A.C.W., Tessitore, A., Young, M., Bushell, S.R., Strain-Damerell, C., Mukhopadhyay, S., Burgess-Brown, N.A., Huiskonen, J.T., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Carpenter, E.P., Structural Genomics Consortium (SGC)
PDB entry 6gyo: Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel in complex with cAMP
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2018-06-30
Authors: Shintre, C.A., Pike, A.C.W., Tessitore, A., Young, M., Bushell, S.R., Strain-Damerell, C., Mukhopadhyay, S., Burgess-Brown, N.A., Huiskonen, J.T., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Carpenter, E.P., Structural Genomics Consortium (SGC)
PDB entry 6gyp: Cryo-EM structure of the CBF3-core-Ndc10-DBD complex of the budding yeast kinetochore
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2018-07-01
Authors: Yan, K., Zhang, Z., Yang, J., McLaughlin, S.H., Barford, D.
PDB entry 6gyr: Transcription factor dimerization activates the p300 acetyltransferase
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-07-01
Authors: Panne, D., Ortega, E.
PDB entry 6gys: Cryo-EM structure of the CBF3-CEN3 complex of the budding yeast kinetochore
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2018-07-01
Authors: Yan, K., Zhang, Z., Yang, J., McLaughlin, S.H., Barford, D.
PDB entry 6gyt: Transcription factor dimerization activates the p300 acetyltransferase
Classification: GENE REGULATION
Source organism: Homo sapiens; Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-07-01
Authors: Panne, D., Ortega, E.
PDB entry 6gyu: Cryo-EM structure of the CBF3-msk complex of the budding yeast kinetochore
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2018-07-02
Authors: Yan, K., Zhang, Z., Yang, J., McLaughlin, S.H., Barford, D.
PDB entry 6gyv: Lariat-capping ribozyme (circular permutation form)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.50004 Å
Deposited: 2018-07-02
Authors: Masquida, B., Meyer, M., Nielsen, H., Olieric, V., Roblin, P., Johansen, S.D., Westhof, E.
PDB entry 6gyw: Crystal structure of DacA from Staphylococcus aureus
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-07-02
Authors: Tosi, T., Freemont, P.S., Grundling, A.
PDB entry 6gyx: Crystal structure of DacA from Staphylococcus aureus in complex with ApCpp
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-07-02
Authors: Tosi, T., Freemont, P.S., Grundling, A.
PDB entry 6gyy: Crystal structure of DacA from Staphylococcus aureus, N166C/T172C double mutant
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2018-07-02
Authors: Tosi, T., Freemont, P.S., Grundling, A.
PDB entry 6gyz: Crystal structure of GlmM from Staphylococcus aureus
Classification: ISOMERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2018-07-02
Authors: Tosi, T., Freemont, P.S., Grundling, A.
PDB entry 6gz0: Crystal Structure of the LeuO Effector Binding Domain
Classification: TRANSCRIPTION
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2018-07-02
Authors: Fragel, S., Montada, A.M., Baumann, U., Schacherl, M., Schnetz, K.
PDB entry 6gz1: Crystal Structure of the LeuO Effector Binding Domain
Classification: TRANSCRIPTION
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2018-07-02
Authors: Fragel, S., Montada, A.M., Baumann, U., Schacherl, M., Schnetz, K.
PDB entry 6gz2: Crystal Structure of the LeuO Effector Binding Domain
Classification: TRANSCRIPTION
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2018-07-02
Authors: Fragel, S., Montada, A.M., Baumann, U., Schacherl, M., Schnetz, K.
PDB entry 6gz3: tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
Classification: RIBOSOME
Source organism: Enterobacteria phage SP6; Oryctolagus cuniculus; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2018-07-03
Authors: Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.
PDB entry 6gz4: tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
Classification: RIBOSOME
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2018-07-03
Authors: Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.
PDB entry 6gz5: tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)
Classification: RIBOSOME
Source organism: Enterobacteria phage SP6; Oryctolagus cuniculus; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2018-07-03
Authors: Flis, J., Holm, M., Rundlet, E.J., Loerke, J., Hilal, T., Dabrowski, M., Buerger, J., Mielke, T., Blanchard, S.C., Spahn, C.M.T., Budkevich, T.V.
PDB entry 6gz6: Structure of a left-handed G-quadruplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.006 Å
Deposited: 2018-07-03
Authors: Bakalar, B., Heddi, B., Schmitt, E., Mechulam, Y., Phan, A.T.
PDB entry 6gz7: Polyamide - DNA complex NMR structure
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2018-07-03
Authors: Aman, K.
PDB entry 6gz8: First GerMN domain of the sporulation protein GerM from Bacillus subtilis
Classification: STRUCTURAL PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2018-07-03
Authors: Trouve, J., Mohamed, A., Leisico, F., Contreras-Martel, C., Liu, B., Mas, C., Rudner, D.Z., Rodrigues, C.D.A., Morlot, C.
PDB entry 6gz9: Crystal structure of a POT family transporter in complex with prodrug valacyclovir
Classification: MEMBRANE PROTEIN
Source organism: Staphylococcus hominis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-07-03
Authors: Minhas, G.S., Newstead, S.
PDB entry 6gza: Structure of murine leukemia virus capsid C-terminal domain
Classification: VIRAL PROTEIN
Source organism: Murine leukemia virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2018-07-03
Authors: Qu, K., Dolezal, M., Schur, F.K.M., Murciano, B., Rumlova, M., Ruml, T., Briggs, J.A.G.