LiteFold/PDB huggingface dataset:
PDB entry 8hgn: Crystal structure of MeaC (Mesaconyl-CoA hydratase)
Classification: LYASE
Source organism: Methylorubrum extorquens CM4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-11-15
Authors: Ahn, J.W., Hong, J., Kim, K.J.
PDB entry 8hgo: The EGF-bound EGFR/HER2 ectodomain complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2022-11-15
Authors: Zhang, Z., Bai, X.
PDB entry 8hgp: The EREG-bound EGFR/HER2 ectodomain complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.53 Å
Deposited: 2022-11-15
Authors: Zhang, Z., Bai, X.
PDB entry 8hgq: The apo-flavodoxin dimer from Synechococcus elongatus PCC 7942
Classification: ELECTRON TRANSPORT
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-11-15
Authors: Liu, S.W., Chen, Y.Y., Gong, Y., Cao, P.
PDB entry 8hgr: The apo-flavodoxin monomer from Synechococcus elongatus PCC 7942
Classification: ELECTRON TRANSPORT
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2022-11-15
Authors: Liu, S.W., Chen, Y.Y., Gong, Y., Cao, P.
PDB entry 8hgs: The EGF-bound EGFR ectodomain homodimer
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.81 Å
Deposited: 2022-11-15
Authors: Zhang, Z., Bai, X.
PDB entry 8hgt: Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei
Classification: OXIDOREDUCTASE
Source organism: Marinobacter nauticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2022-11-15
Authors: Jiang, Y., Tian, X., Cong, Z.
PDB entry 8hgu: Epoxide hydrolase from Bosea sp. PAMC 26642
Classification: HYDROLASE
Source organism: Bosea sp. PAMC 26642
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-11-15
Authors: Lee, M.J., Hwang, J., Do, H., Lee, J.H.
PDB entry 8hgv: Crystal structure of monoalkyl phthalate hydrolase MehpH
Classification: HYDROLASE
Source organism: Gordonia sp. P8219
Experimental method: X-RAY DIFFRACTION
Resolution: 2.30006 Å
Deposited: 2022-11-15
Authors: Zhang, Z.M., Wang, Y.J., Chen, Y.B.
PDB entry 8hgw: Crystal structure of MehpH in complex with MBP
Classification: HYDROLASE
Source organism: Gordonia sp. P8219
Experimental method: X-RAY DIFFRACTION
Resolution: 2.80001 Å
Deposited: 2022-11-15
Authors: Zhang, Z.M., Wang, Y.J., Chen, Y.B.
PDB entry 8hgx: NMR solution structure of subunit epsilon of the Acinetobacter baumannii F-ATP synthase
Classification: ELECTRON TRANSPORT
Source organism: Acinetobacter baumannii
Experimental method: SOLUTION NMR
Deposited: 2022-11-15
Authors: Shin, J., Grueber, G.
PDB entry 8hgz: Crystal structure of insulin
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-16
Authors: DeMirci, H., Ayan, E.
PDB entry 8hh0: Peroxiredoxin from Thermococcus kodakaraensis (TkPrx) F42C/C46S/C205S/C211S mutant modified with 2-(bromoacetyl)naphthalene (Naph@TkPrx*F42C)
Classification: OXIDOREDUCTASE
Source organism: Thermococcus kodakarensis KOD1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-11-16
Authors: Himiyama, T., Hamaguchi, T., Yonekura, K., Nakamura, T.
PDB entry 8hh1: FoF1-ATPase from Bacillus PS3, 81 degrees, highATP
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hh2: F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd,highATP
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hh3: F1 domain of FoF1-ATPase from Bacillus PS3,90 degrees,highATP
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hh4: F1 domain of FoF1-ATPase from Bacillus PS3,101 degrees, highATP
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hh5: F1 domain of FoF1-ATPase from Bacillus PS3,120 degrees,highATP
Classification: TRANSLOCASE/MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hh6: F1 domain of FoF1-ATPase from Bacillus PS3,step waiting,highATP
Classification: TRANSLOCASE/MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hh7: F1 domain of FoF1-ATPase from Bacillus PS3, 81 degrees, lowATP
Classification: TRANSLOCASE/MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hh8: F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd,lowATP
Classification: TRANSLOCASE/MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hh9: F1 domain of FoF1-ATPase from Bacillus PS3, 90 degrees, low ATP
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hha: F1 domain of FoF1-ATPase from Bacillus PS3,120 degrees,lowATP
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hhb: F1 domain of FoF1-ATPase from Bacillus PS3,step waiting,lowATP
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hhc: F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd',lowATP
Classification: MOTOR PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-11-16
Authors: Nakano, A., Kishikawa, J., Mitsuoka, K., Yokoyama, K.
PDB entry 8hhd: Crystal structure of PaMurU
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2022-11-16
Authors: Shin, D.H., Jo, S.R., Kim, M.S.
PDB entry 8hhe: Crystal structure of Cry5B from Bacillus thuringiensis at 4.5 A resolution
Classification: TOXIN
Source organism: Bacillus thuringiensis YBT-1518
Experimental method: X-RAY DIFFRACTION
Resolution: 4.5 Å
Deposited: 2022-11-16
Authors: Li, J., Chan, M.K.
PDB entry 8hhf: The bacterial divisome protein complex FtsB-FtsL-FtsQ
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2022-11-16
Authors: Nguyen, V.H.T., Chen, X.
PDB entry 8hhg: The bacterial divisome protein complex FtsB-FtsL-FtsQ
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-11-16
Authors: Nguyen, V.H.T., Chen, X.
PDB entry 8hhh: The bacterial divisome protein complex FtsB-FtsL-FtsQ
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2022-11-16
Authors: Nguyen, V.H.T., Chen, X.
PDB entry 8hhi: Crystal structure of a triple-helix region of human collagen type III
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-16
Authors: Yan, Z.C., Zhang, D., Qin, B.
PDB entry 8hhj: Crystal structure of the MafB2-CTMGI-2B16B6/MafI2MGI-2B16B6 complex
Classification: ANTIMICROBIAL PROTEIN
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-11-16
Authors: Ha, S.C.
PDB entry 8hhk: Crystal structure of a triple-helix region of human collagen type III
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-11-16
Authors: Yan, Z.C., Zhang, D., Qin, B.
PDB entry 8hhl: Cryo-EM structure of the Cas12m2-crRNA-target DNA full R-loop complex
Classification: RNA BINDING PROTEIN
Source organism: Mycolicibacterium mucogenicum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2022-11-16
Authors: Omura, N.S., Nakagawa, R., Wu, Y.W., Sudfeld, C., Warren, V.R., Hirano, H., Kusakizako, T., Kise, Y., Lebbink, H.G.J., Itoh, Y., Oost, V.D.J., Nureki, O.
PDB entry 8hhm: Cryo-EM structure of the Cas12m2-crRNA-target DNA ternary complex intermediate state
Classification: RNA BINDING PROTEIN
Source organism: Mycolicibacterium mucogenicum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2022-11-16
Authors: Omura, N.S., Nakagawa, R., Wu, Y.W., Sudfeld, C., Warren, V.R., Hirano, H., Kusakizako, T., Kise, Y., Lebbink, H.G.J., Itoh, Y., Oost, V.D.J., Nureki, O.
PDB entry 8hho: cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-16
Authors: Wakabayashi, T., Oide, M., Kato, T., Nakasako, M.
PDB entry 8hhp: Crystal structure of PPARg-LBD complexed with three partial agonists, one nTZDpa and two LT175
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-11-16
Authors: Kojima, H., Itoh, T.
PDB entry 8hhq: Covalent bond formation between cysteine of PPARg-LBD and iodoacetic acid
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-16
Authors: Kojima, H., Itoh, T.
PDB entry 8hhs: Structure of human apoferritin embedded in crystalline ice
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-11-17
Authors: Shi, H., Wu, C., Zhang, X.
PDB entry 8hht: Crystal structure of the SARS-CoV-2 main protease in complex with Hit-1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-11-17
Authors: Zeng, R., Xie, L.W., Huang, C., Wang, K., Liu, Y.Z., Yang, S.Y., Lei, J.
PDB entry 8hhu: Crystal structure of the SARS-CoV-2 main protease in complex with SY110
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.258 Å
Deposited: 2022-11-17
Authors: Zeng, R., Xie, L.W., Huang, C., Wang, K., Liu, Y.Z., Yang, S.Y., Lei, J.
PDB entry 8hhv: endo-alpha-D-arabinanase EndoMA1 from Microbacterium arabinogalactanolyticum
Classification: HYDROLASE
Source organism: Microbacterium arabinogalactanolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-11-17
Authors: Nakashima, C., Li, J., Arakawa, T., Yamada, C., Ishiwata, A., Fujita, K., Fushinobu, S.
PDB entry 8hhx: SARS-CoV-2 Delta Spike in complex with FP-12A
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2022-11-17
Authors: Chen, X., Wu, Y.-M.
PDB entry 8hhy: SARS-CoV-2 Delta Spike in complex with IS-9A
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2022-11-17
Authors: Mohapatra, A., Wu, Y.-M.
PDB entry 8hhz: SARS-CoV-2 Omicron BA.1 Spike in complex with IY-2A
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.28 Å
Deposited: 2022-11-17
Authors: Chen, X., Mohapatra, A., Wu, Y.-M.
PDB entry 8hi1: Streptococcus thermophilus Cas1-Cas2- prespacer ternary complex
Classification: IMMUNE SYSTEM
Source organism: Streptococcus thermophilus DGCC 7710; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2022-11-18
Authors: Chen, Q., Luo, Y.
PDB entry 8hi2: Structure of EV71 VLP frozen at -183 degree embedded in crystalline ice
Classification: VIRUS
Source organism: Enterovirus A71
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-18
Authors: Shi, H., Wu, C., Zhang, X.
PDB entry 8hi4: Cryo-EM structure of the bi-functional malonyl-CoA reductase from Roseiflexus castenholzii
Classification: OXIDOREDUCTASE
Source organism: Roseiflexus castenholzii DSM 13941
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2022-11-18
Authors: Zhang, X., Xu, X., Xin, J.
PDB entry 8hi5: Crystal structure of the NADP+ and MSA bound C terminal domain of bi-functional malonyl-CoA reductase from Roseiflexus castenholzii
Classification: OXIDOREDUCTASE
Source organism: Roseiflexus castenholzii DSM 13941
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-11-18
Authors: Zhang, X., Wu, W.P., Xu, X.
PDB entry 8hi6: Crystal structure of the NADP+ and MSA bound N terminal domain of bi-functional malonyl-CoA reductase from Roseiflexus castenholzii
Classification: OXIDOREDUCTASE
Source organism: Roseiflexus castenholzii DSM 13941
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-18
Authors: Zhang, X., Wu, W.P., Xu, X.
PDB entry 8hi7: Crystal structure of a holoenzyme TglHI with two Fe irons for Pseudomonas syringae Peptidyl (S) 2-mercaptoglycine biosynthesis
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas syringae pv. maculicola str. ES4326
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2022-11-18
Authors: Cheng, W., Zheng, Y.H., Fu, X.L.
PDB entry 8hi8: Crystal structure of a holoenzyme TglHI with three Fe ions for Pseudomonas syringae Peptidyl (S) 2-mercaptoglycine biosynthesis
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas syringae pv. maculicola str. ES4326
Experimental method: X-RAY DIFFRACTION
Resolution: 3.49 Å
Deposited: 2022-11-18
Authors: Cheng, W., Zheng, Y.H., Fu, X.L.
PDB entry 8hi9: SARS-CoV-2 3CL protease (3CLpro) in complex with Robinetin
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2022-11-19
Authors: Su, H.X., Xie, H., Li, M.J., Xu, Y.C.
PDB entry 8hia: Structure of transforming growth factor beta induced protein (TGFBIp) G623R fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2022-11-19
Authors: Low, J.Y.K., Pervushin, K.
PDB entry 8hib: The crystal structure of Pygo2-LDB1-SSBP2 triple complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-11-19
Authors: Wang, H.Y., Yan, X.X., Xu, W.Q.
PDB entry 8hic: Crystal structure of UrtA from Prochlorococcus marinus str. MIT 9313 in complex with urea and calcium
Classification: TRANSPORT PROTEIN
Source organism: Prochlorococcus marinus str. MIT 9313
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-11-19
Authors: Zhang, Y.Z., Wang, P., Wang, C.
PDB entry 8hid: HUMAN ERYTHROCYTE CATALSE COMPLEXED WITH BT-Br
Classification: CYTOSOLIC PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-11-19
Authors: Lin, H.-Y., Yang, G.-F.
PDB entry 8hif: One asymmetric unit of Singapore grouper iridovirus capsid
Classification: VIRAL PROTEIN
Source organism: Singapore grouper iridovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-11-20
Authors: Zhao, Z.N., Liu, C.C., Zhu, D.J., Qi, J.X., Zhang, X.Z., Gao, G.F.
PDB entry 8hig: Co-crystal structure of C-terminal DNA binding domain of Saccharopolyspora erythraea GlnR in complex with its cognate promoter DNA
Classification: TRANSCRIPTION/DNA
Source organism: Saccharopolyspora erythraea NRRL 2338; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.329 Å
Deposited: 2022-11-20
Authors: Lin, W., Xu, J.C., Zhang, Y.
PDB entry 8hih: Cryo-EM structure of Mycobacterium tuberculosis transcription initiation complex with transcription factor GlnR
Classification: TRANSCRIPTION/DNA
Source organism: Mycobacterium tuberculosis; Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2022-11-20
Authors: Lin, W., Shi, J., Xu, J.C.
PDB entry 8hii: The BRIL-SLC19A1/Fab/Nb ternary complex
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2022-11-20
Authors: Zhang, Z., Dang, Y.
PDB entry 8hij: The 5-MTHF-bound BRIL-SLC19A1/Fab/Nb ternary complex
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2022-11-20
Authors: Zhang, Z., Dang, Y.
PDB entry 8hik: The TPP-bound BRIL-SLC19A1/Fab/Nb ternary complex
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2022-11-20
Authors: Zhang, Z., Dang, Y.
PDB entry 8hil: A cryo-EM structure of B. oleracea RNA polymerase V at 3.57 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2022-11-20
Authors: Du, X., Xie, G., Hu, H., Du, J.
PDB entry 8him: A cryo-EM structure of B. oleracea RNA polymerase V elongation complex at 2.73 Angstrom
Classification: TRANSCRIPTION
Source organism: Brassica oleracea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-21
Authors: Hu, H., Xie, G., Du, X., Du, J.
PDB entry 8hin: Structure of human SGLT2-MAP17 complex with Phlorizin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-11-21
Authors: Hiraizumi, M., Kishida, H., Miyaguchi, I., Nureki, O.
PDB entry 8hio: Cryo-EM structure of the Cas12m2-crRNA binary complex
Classification: RNA BINDING PROTEIN
Source organism: Mycolicibacterium mucogenicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2022-11-21
Authors: Omura, N.S., Nakagawa, R., Wu, Y.W., Sudfeld, C., Warren, V.R., Hirano, H., Kusakizako, T., Kise, Y., Lebbink, H.G.J., Itoh, Y., Oost, V.D.J., Nureki, O.
PDB entry 8hip: dsRNA transporter
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2022-11-21
Authors: Jiang, D.H., Zhang, J.T.
PDB entry 8hiq: cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-21
Authors: Wakabayashi, T., Oide, M., Kato, T., Nakasako, M.
PDB entry 8hir: potassium channels
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2022-11-21
Authors: Jiang, D.H., Zhang, J.T.
PDB entry 8his: Crystal structure of DNA decamer containing GuNA[Me,tBu]
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2022-11-21
Authors: Aoyama, H., Obika, S., Yamaguchi, T.
PDB entry 8hit: Crystal structure of anti-CTLA-4 humanized IgG1 MAb--JS007 in complex with human CTLA-4
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2022-11-21
Authors: Tan, S., Shi, Y., Wang, Q., Gao, G.F., Guan, J., Chai, Y., Qi, J.
PDB entry 8hiu: Crystal structure of O-carbamoyltransferase VtdB and the compound VtdB with carbamoyladenylate from Streptomyces sp. NO1W98
Classification: TRANSFERASE
Source organism: Streptomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2022-11-22
Authors: Rao, D., Teng, Y.
PDB entry 8hiv: The structure of apo-SoBcmB with Fe(II) and AKG
Classification: OXIDOREDUCTASE
Source organism: Streptomyces ossamyceticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.20003 Å
Deposited: 2022-11-22
Authors: Wu, L., Zhou, J.H.
PDB entry 8hiw: AtALMT9 in the apo state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2022-11-22
Authors: Gong, D.S.
PDB entry 8hix: Cryo-EM structure of GPR21_m5_Gs
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2022-11-22
Authors: Chen, B., Lin, X., Xu, F.
PDB entry 8hiy: AtALMT9 plus malate
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-11-22
Authors: Gong, D.S.
PDB entry 8hiz: cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2022-11-22
Authors: Wakabayashi, T., Oide, M., Kato, T., Nakasako, M.
PDB entry 8hj0: GPR21(m5) and G15 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2022-11-22
Authors: Chen, B., Lin, X.
PDB entry 8hj1: GPR21(wt) and Gs complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2022-11-22
Authors: Chen, B., Lin, X., Xu, F.
PDB entry 8hj2: GPR21 wt with G15 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-11-22
Authors: Chen, B., Lin, X., Xu, F.
PDB entry 8hj3: cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2022-11-22
Authors: Wakabayashi, T., Oide, M., Kato, T., Nakasako, M.
PDB entry 8hj4: CryoEM structure of an anti-CRISPR protein AcrIIC5 bound to Nme1Cas9-sgRNA complex
Classification: HYDROLASE/RNA/ANTIMICROBIAL PROTEIN
Source organism: Neisseria meningitidis serogroup C (strain 8013); Simonsiella muelleri ATCC 29453; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-11-22
Authors: Wang, Y., Sun, W.
PDB entry 8hj5: Cryo-EM structure of Gq-coupled MRGPRX1 bound with Compound-16
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; Mus musculus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-22
Authors: Gan, B., Yu, L.Y., Ren, R.B.
PDB entry 8hj6: Crystal structure of barley exohydrolase isoform ExoI E220A mutant
Classification: HYDROLASE
Source organism: Hordeum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2022-11-22
Authors: Luang, S., Streltsov, V.A., Hrmova, M.
PDB entry 8hj7: Crystal structure of barley exohydrolase isoform ExoI E220A mutant in complex with beta-D-glucopyranose.
Classification: HYDROLASE
Source organism: Hordeum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-11-22
Authors: Luang, S., Streltsov, V.A., Hrmova, M.
PDB entry 8hj8: Crystal structure of barley exohydrolase isoform ExoI E220A mutant in complex with 2-deoxy-2-fluoro-D-glucopyranosides
Classification: HYDROLASE
Source organism: Hordeum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-11-22
Authors: Luang, S., Streltsov, V.A., Hrmova, M.
PDB entry 8hj9: cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2022-11-22
Authors: Wakabayashi, T., Oide, M., Kato, T., Nakasako, M.
PDB entry 8hja: The crystal structure of syn_CdgR-(c-di-GMP) from Synechocystis sp. PCC 6803
Classification: SIGNALING PROTEIN
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-11-22
Authors: Zeng, X., Peng, Y.J.
PDB entry 8hjb: Crystal structure of Pseudomonas aeruginosa PvrA with coenzyme A
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa PA14
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-11-23
Authors: Liang, H., Bartlam, M.
PDB entry 8hjc: Solution structure of cysteine-rich peptide Bidentatide (Achyranthes bidentata peptide)
Classification: PLANT PROTEIN
Source organism: Achyranthes bidentata
Experimental method: SOLUTION NMR
Deposited: 2022-11-23
Authors: Feng, Y., He, M., Zhang, X.
PDB entry 8hjd: Solution structure of cysteine-rich peptide Bidentatide (Achyranthes bidentata peptide) with glycation
Classification: PLANT PROTEIN
Source organism: Achyranthes bidentata
Experimental method: SOLUTION NMR
Deposited: 2022-11-23
Authors: Feng, Y., He, M., Zhang, X.
PDB entry 8hje: Vismodegib binds to the catalytical domain of human Ubiquitin-Specific Protease 28
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-11-23
Authors: Shi, L., Wang, H., Xu, Z., Xiong, B., Zhang, N.
PDB entry 8hjf: Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with M5, state 2
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-23
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8hjg: Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with M5, state 1
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-23
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8hjh: Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with SIA, state 3
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2022-11-23
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8hjj: Anti-CRISPR protein AcrIC9
Classification: IMMUNE SYSTEM
Source organism: Rhodobacter capsulatus DE442
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-23
Authors: Kang, Y.J., Park, H.H.
PDB entry 8hjk: Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with SIA, state 1
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.833 Å
Deposited: 2022-11-23
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8hjl: Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with M3E
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2022-11-23
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8hjn: Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with UPG
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2022-11-23
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8hjo: Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with UDP state 2
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2022-11-23
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8hjp: Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with UDP state 1
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-11-23
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8hjq: Crystal structure of glycosyltransferase SgUGT94-289-3 in apo state
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2022-11-23
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8hjt: Crystal Structure of Intracellular B30.2 Domain of VpBTN3 and VpBTN2 in Complex with HMBPP
Classification: IMMUNE SYSTEM
Source organism: Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2022-11-23
Authors: Yang, Y.Y., Shen, P.P., Li, X., Yi, S.M., Zhang, M.T., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8hju: Cryo-EM structure of native RC-LH complex from Roseiflexus castenholzii at 10,000 lux
Classification: PHOTOSYNTHESIS
Source organism: Roseiflexus castenholzii DSM 13941
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-23
Authors: Xu, X., Xin, J.
PDB entry 8hjv: Cryo-EM structure of carotenoid-depleted RC-LH complex from Roseiflexus castenholzii at 10,000 lux
Classification: PHOTOSYNTHESIS
Source organism: Roseiflexus castenholzii DSM 13941
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-11-23
Authors: Xu, X., Xin, J.
PDB entry 8hjw: Bi-functional malonyl-CoA reductuase from Chloroflexus aurantiacus
Classification: OXIDOREDUCTASE
Source organism: Chloroflexus aurantiacus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-11-24
Authors: Ahn, J.W., Kim, S.
PDB entry 8hjx: Crystal structure of a cupin protein (tm1459, H52A/H58E mutant) in copper (Cu) substituted form
Classification: METAL BINDING PROTEIN
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2022-11-24
Authors: Matsumoto, R., Kurisu, G., Fujieda, N.
PDB entry 8hjy: Crystal structure of a cupin protein (tm1459, H52A/H58E/F104W mutant) in copper (Cu) substituted form
Classification: METAL BINDING PROTEIN
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2022-11-24
Authors: Matsumoto, R., Kurisu, G., Fujieda, N.
PDB entry 8hjz: Crystal structure of a cupin protein (tm1459, H52A/H58Q mutant) in copper (Cu) substituted form
Classification: METAL BINDING PROTEIN
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2022-11-24
Authors: Matsumoto, R., Kurisu, G., Fujieda, N.
PDB entry 8hk0: Crystal structure of Fic32-33 complex from Streptomyces ficellus NRRL 8067
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces ficellus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-11-24
Authors: Cheng, Y., Qiao, H., Liu, W., Fang, P.
PDB entry 8hk1: The cryo-EM structure of human pre-17S U2 snRNP
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-11-24
Authors: Zhang, X., Zhan, X., Shi, Y.
PDB entry 8hk2: C3aR-Gi-C3a protein complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-24
Authors: Wang, Y., Liu, W., Xu, Y., Zhuang, Y., Xu, H.E.
PDB entry 8hk3: C3aR-Gi-apo protein complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-24
Authors: Wang, Y., Liu, W., Xu, Y., Zhuang, Y., Xu, H.E.
PDB entry 8hk5: C5aR1-Gi-C5a protein complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-24
Authors: Wang, Y., Liu, W., Xu, Y., Zhuang, Y., Xu, H.E.
PDB entry 8hk6: potassium channel
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2022-11-25
Authors: Jiang, D.H., Zhang, J.T.
PDB entry 8hk7: Structure of PKD2-F604P (Polycystin-2, TRPP2) with ML-SA1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-25
Authors: Chen, M.Y., Su, Q., Wang, Z.F., Yu, Y.
PDB entry 8hk9: Apo-form of Periplasmic terephthalate binding protein (TBP) from Ideonella sakaiensis
Classification: TRANSPORT PROTEIN
Source organism: Ideonella sakaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-25
Authors: Lee, S.H., Seo, H., Kim, K.-J.
PDB entry 8hka: TPA bound-form of Periplasmic terephthalate binding protein (TBP) from Ideonella sakaiensis
Classification: TRANSPORT PROTEIN
Source organism: Ideonella sakaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2022-11-25
Authors: Lee, S.H., Seo, H., Kim, K.-J.
PDB entry 8hkb: TPA bound-form of Periplasmic terephthalate binding protein (TBP) from Ideonella sakaiensis mutant K184D
Classification: TRANSPORT PROTEIN
Source organism: Ideonella sakaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-25
Authors: Lee, S.H., Seo, H., Kim, K.-J.
PDB entry 8hkc: Cryo-EM structure of E. coli RNAP sigma32 complex
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli; Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2022-11-25
Authors: Wu, S., Ma, L.X.
PDB entry 8hkd: Crystal structure of P450BSbeta-L78G/Q85F/F173S/G290I variant in complex with palmitoleic acid
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-11-25
Authors: He, C., Wang, X., Li, F.
PDB entry 8hke: dsRNA transporter
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2022-11-25
Authors: Jiang, D.H., Zhang, J.T.
PDB entry 8hkf: ion channel
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2022-11-25
Authors: Jiang, D.H., Zhang, Z.T.
PDB entry 8hkg: Crystal structure of glycosidic hydrolase family 10 (GH10) xylanase XynA contains an additional proline-rich sequence in the C-terminus
Classification: HYDROLASE
Source organism: uncultured organism
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2022-11-26
Authors: Dong, R.Y., Tu, T.
PDB entry 8hkh: Crystal structure of the LC/A1-DARPin18 complex
Classification: TOXIN
Source organism: Clostridium botulinum; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-26
Authors: Wu, Y., Leka, O., Kammerer, R.
PDB entry 8hki: Human TRiC open state
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-11-27
Authors: Cong, Y., Liu, C.X.
PDB entry 8hkj: Crystal structure of the CYP102A5 haem Domain isolated from Bacillus cereus
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-11-27
Authors: Stanfield, J.K., Onoda, H., Sugimoto, H., Shoji, O.
PDB entry 8hkk: ion channel
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2022-11-27
Authors: Jiang, D.H., Zhang, J.T.
PDB entry 8hkm: ion channel
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2022-11-27
Authors: Jiang, D.H., Zhang, J.T.
PDB entry 8hkn: Mutated human ADP-ribosyltransferase 2 (PARP2) catalytic domain bound to approved drug Fluzoparib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-11-27
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 8hko: Mutated human ADP-ribosyltransferase 2 (PARP2) catalytic domain bound to Rucaparib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-27
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 8hkp: Structurally hetero-junctional human Cx36/GJD2 gap junction channel in detergents (C6 symmetry)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-11-27
Authors: Lee, S.N., Cho, H.J., Jeong, H., Ryu, B., Lee, H.J., Lee, H.H., Woo, J.S.
PDB entry 8hkq: ion channel
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-27
Authors: Jiang, D.H., Zhang, J.T.
PDB entry 8hkr: Crystal Structure of Histone H3 Lysine 79 (H3K79) Methyltransferase Rv2067c from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-28
Authors: Dadireddy, V., Singh, P.R., Kalladi, S.M., Valakunja, N., Ramakumar, S.
PDB entry 8hks: Mutated human ADP-ribosyltransferase 2 (PARP2) catalytic domain bound to Pamiparib(BGB-290)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-11-28
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 8hku: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hkv: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.94 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hkw: Crystal structure of importin-alpha3 bound to the 53BP1 nuclear localization signal
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-11-28
Authors: Matsuura, Y.
PDB entry 8hkx: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hky: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.45 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hkz: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.78 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hl1: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hl2: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hl3: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hl4: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.62 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hl5: Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
Classification: RIBOSOME
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.72 Å
Deposited: 2022-11-28
Authors: Wang, Y.H., Zhou, J.
PDB entry 8hl6: Crystal structure of human valosin-containing protein methyltransferase
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-11-29
Authors: Kang, W., Yang, J.K.
PDB entry 8hl7: Crystal structure of p97 N/D1 in complex with a valosin-containing protein methyltransferase
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-11-29
Authors: Kang, W., Yang, J.K.
PDB entry 8hl8: Crystal structrue of MtdL R257K mutant
Classification: TRANSFERASE
Source organism: Marinactinospora thermotolerans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-11-29
Authors: Li, F.D., He, C.
PDB entry 8hl9: Crystal structure of Galectin-8 C-CRD with part of linker
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-11-29
Authors: Si, Y.L.
PDB entry 8hla: Heteromeric ring comprised of peroxiredoxin from Thermococcus kodakaraensis (TkPrx) F42C/C46S/C205S/C211S mutant modified with 2-(bromoacetyl)naphthalene (Naph@TkPrx*F42C) and TkPrx C46S/F76C/C205S/C211S mutant modified with 2-(bromoacetyl)naphthalene (Naph@TkPrx*F76C) (Naph@(MIX|3:3))
Classification: OXIDOREDUCTASE
Source organism: Thermococcus kodakarensis KOD1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2022-11-29
Authors: Himiyama, T., Hamaguchi, T., Yonekura, K., Nakamura, T.
PDB entry 8hlb: Cryo-EM structure of biparatopic antibody Bp109-92 in complex with TNFR2
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli (strain K12); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2022-11-29
Authors: Akiba, H., Fujita, J., Ise, T., Nishiyama, K., Miyata, T., Kato, T., Namba, K., Ohno, H., Kamada, H., Nagata, S., Tsumoto, K.
PDB entry 8hlc: S protein of SARS-CoV-2 in complex with 3711
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-29
Authors: Zhang, Y.Y., Guo, Y.Y., Zhou, Q.
PDB entry 8hld: S protein of SARS-CoV-2 in complex with 26434
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-29
Authors: Zhang, Y.Y., Guo, Y.Y., Zhou, Q.
PDB entry 8hle: Structure of DddY-DMSOP complex
Classification: LYASE
Source organism: Acinetobacter bereziniae NIPH 3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2022-11-30
Authors: Peng, M., Li, C.Y., Zhang, Y.Z.
PDB entry 8hlf: Crystal structure of DddK-DMSOP complex
Classification: LYASE
Source organism: Candidatus Pelagibacter ubique HTCC1062
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2022-11-30
Authors: Peng, M., Li, C.Y., Zhang, Y.Z.
PDB entry 8hlg: Crystal structure of MoaE
Classification: TRANSFERASE
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-30
Authors: Cai, J., Zhao, Y.
PDB entry 8hlj: Mutated human ADP-ribosyltransferase 2 (PARP2) catalytic domain bound to Olaparib (AZD2281)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2022-11-30
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 8hlk: Structure of McyB-C1A1 complexed with L-Leu and AMP
Classification: TOXIN
Source organism: Microcystis aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-30
Authors: Peng, Y.J.
PDB entry 8hll: Crystal structure of p53/BCL2 fusion complex (complex 1)
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2022-11-30
Authors: Wei, H., Guo, M., Wang, H., Chen, Y.
PDB entry 8hlm: Crystal structure of p53/BCL2 fusion complex (complex 2)
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.522 Å
Deposited: 2022-11-30
Authors: Guo, M., Wang, H., Wei, H., Chen, Y.
PDB entry 8hln: Crystal structure of p53/BCL2 fusion complex(complex3)
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.354 Å
Deposited: 2022-11-30
Authors: Guo, M., Wei, H., Wang, H., Chen, Y.
PDB entry 8hlo: Crystal structure of ASAP1-SH3 and MICAL1-PRM complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.168 Å
Deposited: 2022-11-30
Authors: Niu, F., Wei, Z., Yu, C.
PDB entry 8hlp: Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 (apo)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-11-30
Authors: Wei, Y., Yu, Z., Zhao, Y.
PDB entry 8hlq: Mutated human ADP-ribosyltransferase 2 (PARP2) catalytic domain bound to Niraparib (MK-4827)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-30
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 8hlr: Human ADP-ribosyltransferase 1 (PARP1) catalytic domain bound to Fluzoparib (SHR3162)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-11-30
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 8hls: Crystal structure of the sialidase Am1547 from A.muciniphila
Classification: HYDROLASE
Source organism: Akkermansia muciniphila ATCC BAA-835
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2022-11-30
Authors: Rui, B., Xinyue, T.
PDB entry 8hlt: The co-crystal structure of DYRK2 with YK-2-99B
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-12-01
Authors: Shen, H.T., Xiao, Y.B., Yuan, K., Yang, P., Li, Q.N.
PDB entry 8hlv: Bry-LHCII homotrimer of Bryopsis corticulans
Classification: PHOTOSYNTHESIS
Source organism: Bryopsis corticulans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2022-12-01
Authors: Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8hlw: Crystal structure of SIRT3 in complex with H4K16la peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-12-01
Authors: Zhuming, F., Hao, Q.
PDB entry 8hly: Crystal structure of SIRT3 in complex with H3K23la peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-01
Authors: Zhuming, F., Hao, Q.
PDB entry 8hlz: F8-A22-E4 complex of MPXV in hexameric form
Classification: REPLICATION
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-12-02
Authors: Li, Y.N., Shen, Y.P., Hu, Z.W., Yan, R.H.