LiteFold/PDB huggingface dataset:
PDB entry 8hbi: FMDV (A/TUR/14/98) in complex with M688F
Classification: VIRUS
Source organism: Foot-and-mouth disease virus A; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-10-28
Authors: Li, H.Z., Dong, H., Liu, P.
PDB entry 8hbj: cocktail of FMDV (A/TUR/14/98) in complex with M678F and M688F
Classification: VIRUS
Source organism: Foot-and-mouth disease virus A; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-10-28
Authors: Li, H.Z., Dong, H., Liu, P.
PDB entry 8hbk: The crystal structure of SARS-CoV-2 3CL protease in complex with Ensitrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-29
Authors: Lin, M.
PDB entry 8hbl: Crystal structure of the SARS-unique domain (SUD) of SARS-CoV-2 (1.58 angstrom resolution)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-10-29
Authors: Qin, B., Li, Z., Aumonier, S., Wang, M., Cui, S.
PDB entry 8hbm: Structural basis of the farnesoid X receptor/retinoid X receptor heterodimer on inverted repeat DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2022-10-29
Authors: Jiang, L., Chen, Y.
PDB entry 8hbn: Structure of the Mex67-Mtr2-1 heterodimer
Classification: NUCLEAR PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.81 Å
Deposited: 2022-10-29
Authors: Li, Z.Q., Chen, S.J., Sui, S.F.
PDB entry 8hbr: The C-terminal domain of Spiral2
Classification: STRUCTURAL PROTEIN
Source organism: Physcomitrium patens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-10-30
Authors: Hayashi, I.
PDB entry 8hbs: Crystal of rAlfNmt
Classification: GENE REGULATION
Source organism: Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-10-30
Authors: Wang, Y., Wang, S.
PDB entry 8hbt: AmAT7-3 mutant A310G
Classification: BIOSYNTHETIC PROTEIN
Source organism: Astragalus membranaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-10-31
Authors: Wang, L.L.
PDB entry 8hbv: Structure of human UCP1 in the nucleotide-free state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2022-10-31
Authors: Chen, L., Kang, Y.
PDB entry 8hbw: Structure of human UCP1 in the ATP-bound state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.57 Å
Deposited: 2022-10-31
Authors: Chen, L., Kang, Y.
PDB entry 8hc0: Crystal structure of the extracellular domains of GPR110
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-11-01
Authors: Wang, F.F., Song, G.J.
PDB entry 8hc1: CryoEM structure of Helicobacter pylori UreFD/urease complex
Classification: HYDROLASE
Source organism: Helicobacter pylori 26695
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-11-01
Authors: Nim, Y.S., Fong, I.Y.H., Deme, J., Tsang, K.L., Caesar, J., Johnson, S., Wong, K.B., Lea, S.M.
PDB entry 8hc2: SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 1 YB9-258 Fab (1 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.21 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hc3: SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 2 YB9-258 Fabs (2 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.35 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hc4: SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hc5: SARS-CoV-2 wildtype S1 in complex with YB9-258 Fab and R1-32 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hc6: SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with YB9-258 Fab, focused refinement of Fab region
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.69 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hc7: SARS-CoV-2 Omicron BA.1 spike trimer (6P) complex with YB9-258 Fab, focused refinement of RBD-dimer region
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.54 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hc8: SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with YB13-292 Fab, focused refinement of Fab region
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hc9: SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (3 RBD down)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.03 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hca: SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (1 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.35 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hcb: SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (2 RBD up)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.18 Å
Deposited: 2022-11-01
Authors: Liu, B., Gao, X., Chen, Q., Li, Z., Su, M., He, J., Xiong, X.
PDB entry 8hcc: Crystal structure of mTREX1-RNA product complex (AMP)
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-01
Authors: Hsiao, Y.Y., Huang, K.W., Wu, C.Y.
PDB entry 8hcd: Crystal structure of mTREX1-DNA product complex (dNMP)
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-01
Authors: Hsiao, Y.Y., Huang, K.W., Wu, C.Y.
PDB entry 8hce: Crystal structure of mTREX1-CMP complex
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.501 Å
Deposited: 2022-11-01
Authors: Hsiao, Y.Y., Huang, K.W., Wu, C.Y.
PDB entry 8hcf: Crystal structure of mTREX1-UMP complex
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-11-01
Authors: Hsiao, Y.Y., Huang, K.W., Wu, C.Y.
PDB entry 8hcg: Crystal structure of mTREX1-dAMP complex
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2022-11-01
Authors: Hsiao, Y.Y., Huang, K.W., Wu, C.Y.
PDB entry 8hch: Crystal structure of mTREX1-Uridine complex
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-01
Authors: Hsiao, Y.Y., Huang, K.W., Wu, C.Y.
PDB entry 8hci: Crystal structure of a holoenzyme Fe-free TglHI for Pseudomonas syringae Peptidyl (S) 2-mercaptoglycine biosynthesis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudomonas syringae pv. maculicola str. ES4326
Experimental method: X-RAY DIFFRACTION
Resolution: 3.399 Å
Deposited: 2022-11-01
Authors: Cheng, W., Zheng, Y.H., Fu, X.L.
PDB entry 8hcj: Structure of GH43 family enzyme, Xylan 1, 4 Beta- xylosidase from pseudopedobacter saltans
Classification: HYDROLASE
Source organism: Pseudopedobacter saltans DSM 12145
Experimental method: X-RAY DIFFRACTION
Resolution: 2.566 Å
Deposited: 2022-11-01
Authors: Vishwakarma, P., Sachdeva, E., Goyal, A., Ethayathulla, A.S., Das, U., Kaur, P.
PDB entry 8hck: NMR fragment-based screening against the two PDZ do-mains of MDA-9
Classification: CELL INVASION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-01
Authors: Tang, H.
PDB entry 8hcl: zebrafish IRF-10 DBD complex with DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2022-11-01
Authors: Wang, Z.X., Zhang, Y.A., Ouyang, S.Y.
PDB entry 8hcm: zebrafish IRF-11 DBD complex with DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2022-11-02
Authors: Wang, Z.X., Zhang, Y.A., Ouyang, S.Y.
PDB entry 8hcn: CryoEM Structure of Klebsiella pneumoniae UreD/urease complex
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-11-02
Authors: Nim, Y.S., Fong, I.Y.H., Deme, J., Tsang, K.L., Caesar, J., Johnson, S., Wong, K.B., Lea, S.M.
PDB entry 8hco: Substrate-engaged TOM complex from yeast
Classification: PROTEIN TRANSPORT
Source organism: Aequorea victoria; Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-11-02
Authors: Zhou, X.Y., Yang, Y.Q., Wang, G.P., Wang, S.S.
PDB entry 8hcq: Cryo-EM structure of endothelin1-bound ETAR-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2022-11-02
Authors: Yuan, Q., Jiang, Y., Xu, H.E., Ji, Y., Duan, J.
PDB entry 8hcr: Cryo-EM structure of the Mycobacterium tuberculosis cytochrome bcc:aa3 supercomplex and a novel inhibitor targeting subunit cytochrome cI
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis variant bovis BCG
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-11-02
Authors: Mathiyazakan, V., Gruber, G.
PDB entry 8hcs: zebrafish IRF-11 DBD
Classification: DNA BINDING PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-11-03
Authors: Wang, Z.X., Zhang, Y.A., Ouyang, S.Y.
PDB entry 8hct: Crystal structure of Cu2+ binding to Dendrorhynchus zhejiangensis ferritin
Classification: METAL BINDING PROTEIN
Source organism: Dendrorhynchus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2022-11-03
Authors: Ming, T.H., Su, X.R., Huo, C.H.
PDB entry 8hcu: Crystal structure of BCOR/PCGF1/KDM2B complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-11-03
Authors: Shen, F., Chen, R., Xu, J., Liu, J.
PDB entry 8hcx: Cryo-EM structure of Endothelin1-bound ETBR-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-11-03
Authors: Yuan, Q., Jiang, Y., Xu, H.E., Ji, Y., Duan, J.
PDB entry 8hcy: Legionella glycosyltransferase
Classification: TRANSFERASE
Source organism: Legionella
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2022-11-03
Authors: Chen, T.T., Ouyang, S.Y.
PDB entry 8hcz: N-terminal domain structure of mycobacterium tuberculosis FadD23
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2022-11-03
Authors: Yan, M.R., Liu, X., Zhang, W., Rao, Z.H.
PDB entry 8hd0: Cell divisome sPG hydrolysis machinery FtsEX-EnvC
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2022-11-03
Authors: Zhang, Z., Chen, Y.
PDB entry 8hd2: Crystal structure of SAM dependent methyltransferase encoded in type II fatty acid biosynthesis gene cluster from ladderane lipid producing anammox bacteria
Classification: BIOSYNTHETIC PROTEIN
Source organism: Candidatus Brocadia fulgida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-11-03
Authors: Uegaki, T., Nagano, S., Hino, T.
PDB entry 8hd3: Farnesoid X Receptor Agonists_FXR fused with a HD3 peptide
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-11-03
Authors: Lu, X., Zhang, H.
PDB entry 8hd4: Full-length crystal structure of mycobacterium tuberculosis FadD23 in complex with AMPC16
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2022-11-03
Authors: Yan, M.R., Liu, X., Zhang, W., Rao, Z.H.
PDB entry 8hd5: The crystal structure of Hu protein in Staphylococcus aureus
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-11-03
Authors: Liu, Y.H., Chen, H., Li, Y., Liu, B.
PDB entry 8hd6: The relaxed pre-Tet-S1 state of G264A mutated Tetrahymena group I intron with 6nt 3'/5'-exon and 2-aminopurine nucleoside
Classification: RNA
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2022-11-03
Authors: Luo, B., Zhang, C., Ling, X., Mukherjee, S., Jia, G., Xie, J., Jia, X., Liu, L., Baulin, E.F., Luo, Y., Jiang, L., Dong, H., Wei, X., Bujnicki, J.M., Su, Z.
PDB entry 8hd7: The intermediate pre-Tet-S1 state of G264A mutated Tetrahymena group I intron with 6nt 3'/5'-exon and 2-aminopurine nucleoside
Classification: RNA
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2022-11-03
Authors: Luo, B., Zhang, C., Ling, X., Mukherjee, S., Jia, G., Xie, J., Jia, X., Liu, L., Baulin, E.F., Luo, Y., Jiang, L., Dong, H., Wei, X., Bujnicki, J.M., Su, Z.
PDB entry 8hd8: Crystal structure of TMPRSS2 in complex with 212-148
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-03
Authors: Wang, H., Liu, X., Sun, L., Yang, H.
PDB entry 8hda: Crystal structure of Ubl1 (residues 18-111) of SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2022-11-03
Authors: Ni, X.C., Lei, J.
PDB entry 8hdd: Complex structure of catalytic, small, and a partial electron transfer subunits from Burkholderia cepacia FAD glucose dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Burkholderia cepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-11-04
Authors: Yoshida, H., Sode, K.
PDB entry 8hde: Brucella melitensis 7-alpha-Hydroxysteroid Dehydrogenase mutant: 1-53 truncation/I258M
Classification: OXIDOREDUCTASE
Source organism: Brucella melitensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-04
Authors: Liu, Z.Y., Zhang, R.Z.
PDB entry 8hdf: Full length crystal structure of mycobacterium tuberculosis FadD23 in complex with ANP and PLM
Classification: BIOSYNTHETIC PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2022-11-04
Authors: Yan, M.R., Liu, X., Zhang, W., Rao, Z.H.
PDB entry 8hdg: Small peptide enhances the binding of nutline-3a to MdmX
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-11-04
Authors: Cheng, X.Y., Huang, Y., Wei, Q.Y., Huang, J.J., Peng, Y.W., Su, Z.D.
PDB entry 8hdh: Structure of human SGLT2-MAP17 complex with Canagliflozin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-11-04
Authors: Hiraizumi, M., Kishida, H., Miyaguchi, I., Nureki, O.
PDB entry 8hdi: Brucella melitensis 7-alpha-Hydroxysteroid Dehydrogenase mutant: 1-53 truncation/K262T
Classification: OXIDOREDUCTASE
Source organism: Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2022-11-04
Authors: Liu, Z.Y., Zhang, R.Z.
PDB entry 8hdj: Periplasmic domain of RsgI2 of Clostridium thermocellum
Classification: SIGNALING PROTEIN
Source organism: Acetivibrio thermocellus DSM 1313
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-11-04
Authors: Chen, C., Dong, S., Feng, Y.G.
PDB entry 8hdk: Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine and glutamate (minor class in symmetry)
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2022-11-04
Authors: Zhang, M., Zhang, J., Guo, F., Li, Y., Zhu, S.
PDB entry 8hdl: Crystal structure of ASFV trans geranylgeranyl diphosphate synthase B318L
Classification: TRANSFERASE
Source organism: African swine fever virus (strain Badajoz 1971 Vero-adapted)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.198 Å
Deposited: 2022-11-04
Authors: Zhao, H.F.
PDB entry 8hdn: Brucella melitensis 7-alpha-Hydroxysteroid Dehydrogenase mutant: 1-53 truncation-I258M/K262T
Classification: OXIDOREDUCTASE
Source organism: Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-05
Authors: Liu, Z.Y., Zhang, R.Z.
PDB entry 8hdo: Structure of A2BR bound to synthetic agonists BAY 60-6583
Classification: MEMBRANE PROTEIN
Source organism: Camelus bactrianus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2022-11-05
Authors: Cai, H., Xu, Y., Xu, H.E., Jiang, Y.
PDB entry 8hdp: Structure of A2BR bound to endogenous agonists adenosine
Classification: MEMBRANE PROTEIN
Source organism: Camelus bactrianus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-05
Authors: Cai, H., Xu, Y., Xu, H.E., Jiang, Y.
PDB entry 8hdr: Cyanophage Pam3 neck
Classification: VIRAL PROTEIN
Source organism: uncultured cyanophage
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2022-11-06
Authors: Yang, F., Jiang, Y.L., Zhou, C.Z.
PDB entry 8hds: Cyanophage Pam3 portal-adaptor
Classification: VIRAL PROTEIN
Source organism: uncultured cyanophage
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2022-11-06
Authors: Yang, F., Jiang, Y.L., Zhou, C.Z.
PDB entry 8hdt: Cyanophage Pam3 capsid asymmetric unit
Classification: VIRAL PROTEIN
Source organism: uncultured cyanophage
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2022-11-06
Authors: Yang, F., Jiang, Y.L., Zhou, C.Z.
PDB entry 8hdu: De novo design cavitated protein without predefined topology
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2022-11-06
Authors: Hu, X., Xu, Y.
PDB entry 8hdv: De novo design cavitated protein without predefined topology
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-11-06
Authors: Hu, X., Xu, Y.
PDB entry 8hdw: Cyanophage Pam3 Sheath-tube
Classification: VIRAL PROTEIN
Source organism: uncultured cyanophage
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-06
Authors: Yang, F., Jiang, Y.L., Zhou, C.Z.
PDB entry 8hdz: Monkeypox virus DNA replication holoenzyme F8, A22 and E4 complex in an apo form
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2022-11-07
Authors: Xu, Y., Wu, Y., Zhang, Y., Fan, R., Yang, Y., Li, D., Yang, B., Zhang, Z., Dong, C.
PDB entry 8he0: Crystal structure of importin-alpha1 bound to the HIF-1alpha nuclear localization signal (wild-type)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-11-07
Authors: Matsuura, Y.
PDB entry 8he1: The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
Classification: HYDROLASE
Source organism: Puccinia striiformis f. sp. tritici
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2022-11-07
Authors: Liu, L., Li, Y.C., Zhou, Y., Yang, Q.
PDB entry 8he2: The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
Classification: HYDROLASE
Source organism: Puccinia striiformis f. sp. tritici
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2022-11-07
Authors: Liu, L., Li, Y.C., Zhou, Y., Yang, Q.
PDB entry 8he3: Crystal structure of importin-alpha1 bound to the HIF-1alpha nuclear localization signal (delta 724-751)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-11-07
Authors: Matsuura, Y.
PDB entry 8he4: The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
Classification: HYDROLASE
Source organism: Puccinia striiformis f. sp. tritici
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2022-11-07
Authors: Liu, L., Li, Y.C., Zhou, Y., Yang, Q.
PDB entry 8he5: RNA polymerase II elongation complex bound with Rad26 and Elf1, stalled at SHL(-3.5) of the nucleosome
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.95 Å
Deposited: 2022-11-07
Authors: Osumi, K., Kujirai, T., Ehara, H., Kinoshita, C., Saotome, M., Kagawa, W., Sekine, S., Takizawa, Y., Kurumizaka, H.
PDB entry 8he6: Crystal structure of a fosfomycin and bleomycin resistant protein (ALL3014) from Anabaena/Nostoc cyanobacterium at 1.70 A resolution
Classification: TRANSFERASE
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-07
Authors: Chatterjee, A., Singh, P.K., Singh, T.P., Marina, A., Sharma, S., Rai, L.C.
PDB entry 8he7: ADP-ribosyltransferase 1 (PARP1) catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-07
Authors: Wang, X.Y., Zhou, J., Xu, B.L.
PDB entry 8he8: Human ADP-ribosyltransferase 2 (PARP2) catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2022-11-07
Authors: Wang, X.Y., Xu, B.L., Zhou, J.
PDB entry 8he9: Crystal structure of CTSB in complex with K777
Classification: ANTIVIRAL PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-11-07
Authors: Wang, H., Li, D., Sun, L., Yang, H.
PDB entry 8hea: Esterase2 (EaEst2) from Exiguobacterium antarcticum
Classification: HYDROLASE
Source organism: Exiguobacterium antarcticum B7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2022-11-08
Authors: Hwang, J., Lee, J.H.
PDB entry 8heb: SARS-CoV-2 Spike trimer in complex with RmAb 9H1 Fab in the class 1 conformation
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2022-11-08
Authors: Guo, H., Gao, Y., Lu, Y., Yang, H., Ji, X.
PDB entry 8hec: SARS-CoV-2 Spike trimer in complex with RmAb 9H1 Fab in the class 2 conformation
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-11-08
Authors: Guo, H., Gao, Y., Lu, Y., Yang, H., Ji, X.
PDB entry 8hed: Local refinement of the SARS-CoV-2 Spike trimer in complex with RmAb 9H1 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2022-11-08
Authors: Guo, H., Gao, Y., Lu, Y., Yang, H., Ji, X.
PDB entry 8hee: Pentamer of FMDV (A/TUR/14/98)
Classification: VIRAL PROTEIN
Source organism: Foot-and-mouth disease virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-08
Authors: Li, H.Z., Dong, H.
PDB entry 8hef: The Crystal structure of deuterated S-217622 (Ensitrelvir) bound to the main protease (3CLpro/Mpro) of SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2022-11-08
Authors: Yan, M., Zhang, H.
PDB entry 8heg: Pentamer of FMDV (A/TUR/14/98) in complex with M3F
Classification: VIRUS
Source organism: Foot-and-mouth disease virus; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-08
Authors: Li, H.Z., Dong, H., Liu, P.
PDB entry 8heh: Crystal structure of GCN5-related N-acetyltransferase 05790
Classification: TRANSFERASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-08
Authors: Xu, M.X., Ran, T.T., Wang, W.
PDB entry 8hei: Crystal structure of CTSB in complex with E64d
Classification: ANTIVIRAL PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-11-08
Authors: Wang, H., Li, D., Sun, L., Yang, H.
PDB entry 8hej: Crystal structure of Transthyretin in complex with a covalent inhibitor trans-styrylpyrazole
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-11-08
Authors: Kim, H., Choi, S., Lee, C.
PDB entry 8hek: Crystal Structure of Anti-CRISPR AcrIE2
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage JBD88a
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2022-11-08
Authors: Koo, J., Ka, D., Bae, E.
PDB entry 8hel: Crystal Structure of Anti-CRISPR AcrIE3
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage DMS3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.332 Å
Deposited: 2022-11-08
Authors: Koo, J., Bae, E.
PDB entry 8hen: Crystal structure of CTSB in complex with 212-148
Classification: ANTIVIRAL PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-11-08
Authors: Wang, H., Li, D., Sun, L., Yang, H.
PDB entry 8heo: Crystal structure of SIAH1 SBD bound to Axin2 peptide
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2022-11-08
Authors: Yan, X.X., Tian, L.F.
PDB entry 8hep: Solution structure of the periplasmic domain of the anti-sigma factor RsgI1 from Clostridium thermocellum
Classification: SIGNALING PROTEIN
Source organism: Acetivibrio thermocellus DSM 1313
Experimental method: SOLUTION NMR
Deposited: 2022-11-08
Authors: Chen, C., Feng, Y.
PDB entry 8heq: Solution structure of the periplasmic domain of the anti-sigma factor RsgI2 from Clostridium thermocellum
Classification: SIGNALING PROTEIN
Source organism: Acetivibrio thermocellus DSM 1313
Experimental method: SOLUTION NMR
Deposited: 2022-11-08
Authors: Chen, C., Feng, Y.
PDB entry 8her: Solution structure of the periplasmic domain of RsgI6 from Clostridium thermocellum
Classification: SIGNALING PROTEIN
Source organism: Acetivibrio thermocellus DSM 1313
Experimental method: SOLUTION NMR
Deposited: 2022-11-08
Authors: Chen, C., Feng, Y.
PDB entry 8hes: Crystal structure of SARS-CoV-2 RBD and NIV-10 complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-11-08
Authors: Moriyama, S., Anraku, Y., Taminishi, S., Adachi, Y., Kuroda, D., Higuchi, Y., Kotaki, R., Tonouchi, K., Yumoto, K., Suzuki, T., Kita, S., Someya, T., Fukuhara, H., Kuroda, Y., Yamamoto, T., Onodera, T., Fukushi, S., Maeda, K., Nakamura-Uchiyama, F., Hashiguchi, T., Hoshino, A., Maenaka, K., Takahashi, Y.
PDB entry 8het: Crystal structure of CTSL in complex with E64d
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-08
Authors: Wang, H., Shao, M., Sun, L., Yang, H.
PDB entry 8heu: C12 portal in HCMV A-capsid
Classification: VIRAL PROTEIN
Source organism: Human herpesvirus 5 strain AD169
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-11-08
Authors: Li, Z., Yu, X.
PDB entry 8hev: C12 portal in HCMV B-capsid
Classification: VIRAL PROTEIN
Source organism: Human betaherpesvirus 5
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-11-08
Authors: Li, Z., Yu, X.
PDB entry 8hew: Potato 14-3-3 St14f
Classification: PROTEIN BINDING
Source organism: Solanum tuberosum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2022-11-08
Authors: Taoka, K., Kawahara, I., Shinya, S., Harada, K., Muranaka, T., Furuita, K., Nakagawa, A., Fujiwara, T., Tsuji, H., Kojima, C.
PDB entry 8hex: C5 portal vertex in HCMV B-capsid
Classification: VIRAL PROTEIN
Source organism: Human betaherpesvirus 5
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-11-08
Authors: Li, Z., Yu, X.
PDB entry 8hey: One CVSC-binding penton vertex in HCMV B-capsid
Classification: VIRAL PROTEIN
Source organism: Human betaherpesvirus 5
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-11-09
Authors: Li, Z., Yu, X.
PDB entry 8hez: Structure of human SGLT2-MAP17 complex with Dapagliflozin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-09
Authors: Hiraizumi, M., Kishida, H., Miyaguchi, I., Nureki, O.
PDB entry 8hf0: DmDcr-2/R2D2/LoqsPD with 50bp-dsRNA in Dimer state
Classification: RNA BINDING PROTEIN/RNA
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2022-11-09
Authors: Su, S., Wang, J., Wang, H.W., Ma, J.
PDB entry 8hf1: DmDcr-2/R2D2/LoqsPD with 19bp-dsRNA in Trimer state
Classification: RNA BINDING PROTEIN/RNA
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-11-09
Authors: Su, S., Wang, J., Ma, J.
PDB entry 8hf2: Cryo-EM structure of WeiTsing
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.14 Å
Deposited: 2022-11-09
Authors: Qin, L., Tang, L.H., Chen, Y.H.
PDB entry 8hf3: Cryo-EM structure of human ZDHHC9/GCP16 complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-11-09
Authors: Wu, J., Hu, Q., Zhang, Y., Liu, S., Yang, A.
PDB entry 8hf4: Cryo-EM structure of nucleotide-bound ComA at outward-facing state with EC gate closed conformation
Classification: MEMBRANE PROTEIN, TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae D39
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-09
Authors: Yu, L., Xin, X., Min, L.
PDB entry 8hf5: Cryo-EM structure of nucleotide-bound ComA at outward-facing state with EC gate open conformation
Classification: MEMBRANE PROTEIN, TRANSPORT PROTEIN
Source organism: Streptococcus pneumoniae D39
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-09
Authors: Yu, L., Xin, X., Min, L.
PDB entry 8hf6: Cryo-EM structure of nucleotide-bound ComA E647Q mutant
Classification: HYDROLASE, TRANSLOCASE
Source organism: Streptococcus pneumoniae D39
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-11-09
Authors: Yu, L., Xin, X., Min, L.
PDB entry 8hf7: Cryo-EM structure of ComA bound to its mature substrate CSP peptide
Classification: HYDROLASE, TRANSLOCASE
Source organism: Streptococcus pneumoniae D39; Streptococcus Streptococcus pneumoniae D39
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-11-09
Authors: Yu, L., Xin, X., Min, L.
PDB entry 8hf8: Human PPAR delta ligand binding domain in complex with a synthetic agonist V1
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2022-11-09
Authors: Dai, L., Sun, H.B., Yuan, H.L., Feng, Z.Q.
PDB entry 8hf9: The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
Classification: HYDROLASE
Source organism: Puccinia striiformis f. sp. tritici
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-11-10
Authors: Liu, L., Li, Y.C., Zhou, Y., Yang, Q.
PDB entry 8hfa: The structure of chitin deacetylase VdPDA1 from Verticillium dahliae
Classification: HYDROLASE
Source organism: Verticillium dahliae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2022-11-10
Authors: Liu, L., Zhou, Y., Yang, Q.
PDB entry 8hfb: Evolved variant of quercetin 2,4-dioxygenase from Bacillus subtilis
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2022-11-10
Authors: Eom, H., Song, W.J.
PDB entry 8hfc: Cryo-EM structure of yeast Erf2/Erf4 complex
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-11-10
Authors: Wu, J., Hu, Q., Zhang, Y., Yang, A., Liu, S.
PDB entry 8hfd: Crystal structure of allantoinase from E. coli BL21
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2022-11-10
Authors: Lin, E.S., Huang, H.Y., Yang, P.C., Liu, H.W., Huang, C.Y.
PDB entry 8hfe: Cryo-EM structure of human norepinephrine transporter NET in an inward-open state at resolution of 2.5 angstrom
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-11-10
Authors: Tan, J., Xiao, Y., Kong, F., Lei, J., Yuan, Y., Yan, C.
PDB entry 8hff: Cryo-EM structure of human norepinephrine transporter NET in the presence of norepinephrine in an inward-open state at resolution of 2.9 angstrom.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2022-11-10
Authors: Tan, J., Xiao, Y., Kong, F., Lei, J., Yuan, Y., Yan, C.
PDB entry 8hfg: Cryo-EM structure of human norepinephrine transporter NET in the presence of dopamine in an inward-open state at resolution of 3.0 angstrom.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-10
Authors: Tan, J., Xiao, Y., Kong, F., Lei, J., Yuan, Y., Yan, C.
PDB entry 8hfh: CENP-E motor domain in complex with AMPPNP and Mg2+
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-11-10
Authors: Shibuya, A., Yokoyama, H.
PDB entry 8hfi: Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant desipramine in an inward-open state at resolution of 2.5 angstrom.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-11-10
Authors: Tan, J., Xiao, Y., Kong, F., Lei, J., Yuan, Y., Yan, C.
PDB entry 8hfj: Crystal Structure of CbAR mutant (H162F) in complex with NADP+ and a bulky 1,3-cyclodiketone
Classification: OXIDOREDUCTASE
Source organism: Cercospora sp. JNU001
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-11-10
Authors: Hou, X.D., Yin, D.J., Rao, Y.J.
PDB entry 8hfk: Crystal Structure of CbAR mutant (H162F) in complex with NADP+ and halogenated aryl ketone
Classification: OXIDOREDUCTASE
Source organism: Cercospora sp. JNU001
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-11-10
Authors: Hou, X.D., Yin, D.J., Rao, Y.J.
PDB entry 8hfl: Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant bupropion in an inward-open state at resolution of 3.0 angstrom.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-11
Authors: Tan, J., Xiao, Y., Kong, F., Lei, J., Yuan, Y., Yan, C.
PDB entry 8hfm: Crystal Structure of Mycobacterium smegmatis MshC
Classification: LIGASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2022-11-11
Authors: Pang, L., Weeks, S.D., Strelkov, S.V.
PDB entry 8hfn: Crystal Structure of Mycobacterium smegmatis MshC in Complex with Compound 7b
Classification: LIGASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2022-11-11
Authors: Pang, L., Weeks, S.D., Strelkov, S.V.
PDB entry 8hfo: Crystal Structure of Mycobacterium smegmatis MshC in Complex with Compound 7d
Classification: LIGASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2022-11-11
Authors: Pang, L., Weeks, S.D., Strelkov, S.V.
PDB entry 8hfp: Crystal structure of the methyl-CpG-binding domain of SETDB2 in complex with the cysteine-rich domain of C11orf46 protein
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2022-11-11
Authors: Mahana, Y., Ariyoshi, M., Shirakawa, M.
PDB entry 8hfq: Cryo-EM structure of CpcL-PBS from cyanobacterium Synechocystis sp. PCC 6803
Classification: PHOTOSYNTHESIS
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2022-11-11
Authors: Zheng, L., Zhang, Z., Wang, H., Zheng, Z., Gao, N., Zhao, J.
PDB entry 8hfr: NPC-trapped pre-60S particle
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2022-11-12
Authors: Li, Z.Q., Chen, S.J., Sui, S.F.
PDB entry 8hfs: The structure of LcnA, LciA, and the man-PTS of Lactococcus lactis
Classification: MEMBRANE PROTEIN
Source organism: Lactococcus lactis subsp. lactis; Lactococcus lactis subsp. lactis (strain KF147)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2022-11-12
Authors: Wang, J.W.
PDB entry 8hfv: Crystal structure of CTSL in complex with K777
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-12
Authors: Wang, H., Shao, M., Sun, L., Yang, H.
PDB entry 8hfw: The crystal structure of alpha/beta fold hydrolase
Classification: HYDROLASE
Source organism: Burkholderia pyrrocinia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2022-11-12
Authors: Lu, H., Xu, Y.
PDB entry 8hfx: Cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with white-tailed deer ACE2
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Odocoileus virginianus texanus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2022-11-13
Authors: Han, P., Meng, Y.M., Qi, J.X.
PDB entry 8hfy: SARS-CoV-2 Omicron BA.1 spike protein receptor-binding domain in complex with white-tailed deer ACE2
Classification: VIRAL PROTEIN
Source organism: Odocoileus virginianus texanus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2022-11-13
Authors: Han, P., Meng, Y.M., Qi, J.X.
PDB entry 8hfz: Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with white-tailed deer ACE2
Classification: VIRAL PROTEIN
Source organism: Odocoileus virginianus texanus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2022-11-13
Authors: Han, P., Meng, Y.M., Qi, J.X.
PDB entry 8hg0: Cryo-EM structure of SARS-CoV-2 prototype spike protein receptor-binding domain in complex with white-tailed deer ACE2
Classification: VIRAL PROTEIN
Source organism: Odocoileus virginianus texanus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2022-11-13
Authors: Han, P., Meng, Y.M., Qi, J.X.
PDB entry 8hg1: The structure of MPXV polymerase holoenzyme in replicating state
Classification: REPLICATION/DNA
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-13
Authors: Peng, Q., Xie, Y.F., Kuai, L., Wang, H., Qi, J.X., Gao, F., Shi, Y.
PDB entry 8hg3: Cryo-EM structure of the Lhcp complex from Ostreococcus tauri
Classification: ELECTRON TRANSPORT
Source organism: Ostreococcus tauri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2022-11-13
Authors: Shan, J., Sheng, X., Ishii, A., Watanabe, A., Song, C., Murata, K., Minagawa, J., Liu, Z.
PDB entry 8hg5: Cryo-EM structure of the prasinophyte-specific light-harvesting complex (Lhcp)from Ostreococcus tauri
Classification: ELECTRON TRANSPORT
Source organism: Ostreococcus tauri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-13
Authors: Shan, J., Sheng, X., Ishii, A., Watanabe, A., Song, C., Murata, K., Minagawa, J., Liu, Z.
PDB entry 8hg6: Cryo-EM structure of the prasinophyte-specific light-harvesting complex (Lhcp)from Ostreococcus tauri
Classification: ELECTRON TRANSPORT
Source organism: Ostreococcus tauri
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2022-11-13
Authors: Shan, J., Sheng, X., Ishii, A., Watanabe, A., Song, C., Murata, K., Minagawa, J., Liu, Z.
PDB entry 8hg7: Structure of human SGLT2-MAP17 complex with Sotagliflozin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-11-14
Authors: Hiraizumi, M., Kishida, H., Miyaguchi, I., Nureki, O.
PDB entry 8hg9: Cytochrome P450 steroid hydroxylase (BaCYP106A6) from Bacillus species
Classification: HORMONE
Source organism: Bacillus sp. (in: Bacteria)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2022-11-14
Authors: Do, H., Lee, J.H.
PDB entry 8hga: Monomer structure of transforming growth factor beta induced protein (TGFBIp) G623R fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: SOLID-STATE NMR
Deposited: 2022-11-14
Authors: Low, J.Y.K., Pervushin, K.
PDB entry 8hgb: Crystal structure of the CYP199A4 mutant F182G in complex with 3-hydroxy-4-methoxybenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-11-14
Authors: Jiang, Y., Cong, Z.
PDB entry 8hgc: Crystal structure of the CYP199A4 mutant F182T in complex with 4-methoxybenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2022-11-14
Authors: Jiang, Y., Cong, Z.
PDB entry 8hgd: Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei
Classification: OXIDOREDUCTASE
Source organism: Marinobacter nauticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2022-11-14
Authors: Jiang, Y., Cong, Z.
PDB entry 8hge: Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei in complex with 12-hydroxydodecanoic acid
Classification: OXIDOREDUCTASE
Source organism: Marinobacter nauticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2022-11-14
Authors: Jiang, Y., Cong, Z.
PDB entry 8hgf: Human PKM2 mutant - C326S
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-11-14
Authors: Chen, Y.-C., Lin, K.-T., Cheng, H.-C.
PDB entry 8hgg: Structure of 2:2 PAPP-A.ProMBP complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2022-11-14
Authors: Zhong, Q.H., Chu, H.L., Wang, G.P., Zhang, C., Wei, Y., Qiao, J., Hang, J.
PDB entry 8hgh: Structure of 2:2 PAPP-A.STC2 complex
Classification: HYDROLASE
Source organism: Escherichia coli K-12; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.16 Å
Deposited: 2022-11-14
Authors: Zhong, Q.H., Chu, H.L., Wang, G.P., Zhang, C., Wei, Y., Qiao, J., Hang, J.
PDB entry 8hgi: Crystal structure of VNAR aGFP14 in complex with GFP
Classification: FLUORESCENT PROTEIN
Source organism: Chiloscyllium plagiosum; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-11-14
Authors: Zheng, P., Zhu, C., Jin, T.
PDB entry 8hgj: Toxascaris leonina galectin (Tl-gal) and Human T-cell immunoglobulin mucin-3 (Tim3) complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Toxascaris leonina
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.82 Å
Deposited: 2022-11-14
Authors: Han, C.W., Jang, S.B.
PDB entry 8hgk: Crystal structure of human ClpP in complex with ZK53
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-11-14
Authors: Yang, C.-G., Gan, J.H., Zhou, L.-L.
PDB entry 8hgl: SARS-CoV-2 spike in complex with neutralizing antibody NIV-11
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-15
Authors: Moriyama, S., Anraku, Y., Muranishi, S., Adachi, Y., Kuroda, D., Higuchi, Y., Kotaki, R., Tonouchi, K., Yumoto, K., Suzuki, T., Kita, S., Someya, T., Fukuhara, H., Kuroda, Y., Yamamoto, T., Onodera, T., Fukushi, S., Maeda, K., Nakamura-Uchiyama, F., Hashiguchi, T., Hoshino, A., Maenaka, K., Takahashi, Y.
PDB entry 8hgm: Structure of SARS-CoV-2 spike RBD in complex with neutralizing antibody NIV-11
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-11-15
Authors: Moriyama, S., Anraku, Y., Muranishi, S., Adachi, Y., Kuroda, D., Higuchi, Y., Kotaki, R., Tonouchi, K., Yumoto, K., Suzuki, T., Kita, S., Someya, T., Fukuhara, H., Kuroda, Y., Yamamoto, T., Onodera, T., Fukushi, S., Maeda, K., Nakamura-Uchiyama, F., Hashiguchi, T., Hoshino, A., Maenaka, K., Takahashi, Y.