LiteFold/PDB huggingface dataset:
PDB entry 8xnf: Cryo-EM structure of SARS-CoV-2 Omicron BA.2.86 spike protein(6P) in complex with human ACE2
Classification: HYDROLASE/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-12-29
Authors: Li, L.J., Gu, Y.H., Shi, K.Y., Qi, J.X., Gao, G.F.
PDB entry 8xng: Cryo-EM structure of OSCA1.2-liposome-inside-out closed state
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2023-12-29
Authors: Zhang, Y., Han, Y.
PDB entry 8xni: Crystal structure of trypsin in-complex with E-64
Classification: HYDROLASE/INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-12-30
Authors: Akbar, Z., Ahmad, M.S.
PDB entry 8xnj: Crystal structure of trypsin in-complex with arginine
Classification: HYDROLASE/INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-12-30
Authors: Akbar, Z., Ahmad, M.S.
PDB entry 8xnk: Cryo-EM structure of SARS-CoV-2 Omicron HV.1 spike protein(6P) in complex with human ACE2
Classification: HYDROLASE/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2023-12-30
Authors: Li, L.J., Gu, Y.H., Shi, K.Y., Qi, J.X., Gao, G.F.
PDB entry 8xnl: Respiratory complex Peripheral Arm of CI, close form A, focus-refined map of type I, Wild type mouse under thermoneutral temperature
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnm: Respiratory complex Peripheral Arm of CI, close form B, focus-refined map of type I, Wild type mouse under thermoneutral temperature
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnn: Respiratory complex Peripheral Arm of CI, open form A, focus-refined map of type I, Wild type mouse under thermoneutral temperature
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xno: Respiratory complex Peripheral Arm of CI, close form A, focus-refined map of type IA, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnp: Respiratory complex Peripheral Arm of CI, close form B, focus-refined map of type IA, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnq: Respiratory complex Peripheral Arm of CI, open form A, focus-refined map of type IA, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnr: Respiratory complex Peripheral Arm of CI, close form A, focus-refined map of type IB, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xns: Respiratory complex Peripheral Arm of CI, close form B, focus-refined map of type IB, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnt: Respiratory complex Peripheral Arm of CI, close form C, focus-refined map of type IB, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnu: Respiratory complex Peripheral Arm of CI, open form A, focus-refined map of type IB, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnv: Respiratory complex Peripheral Arm of CI, close form A, focus-refined map of type II, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnw: Respiratory complex Peripheral Arm of CI, close form B, focus-refined map of type II, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnx: Respiratory complex Peripheral Arm of CI, open form A, focus-refined map of type II, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xny: Respiratory complex Peripheral Arm of CI, open form B, focus-refined map of type II, Wild type mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xnz: Respiratory complex Peripheral Arm of CI, close form A, focus-refined map of type I, PERK -/- mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xo0: Respiratory complex Peripheral Arm of CI, close form B, focus-refined map of type I, PERK -/- mouse under Cold Acclimation
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-12-30
Authors: Shin, Y.-C., Liao, M.
PDB entry 8xo1: Human KCNQ2-CaM in complex with QO-83
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-12-31
Authors: Zhao, Y.W., Yang, Z.N., Guo, J.T., Du, X.N.
PDB entry 8xo2: Crystal structure of measles virus fusion inhibitor M1 complexed with F protein HR1 (HR1-42) (P21212 space group)
Classification: ANTIVIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.306 Å
Deposited: 2023-12-31
Authors: Oishi, S., Takahara, A., Nakatsu, T.
PDB entry 8xo3: Crystal structure of measles virus fusion inhibitor M1 complexed with F protein HR1 (HR1-47) (P321 space group)
Classification: ANTIVIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.104 Å
Deposited: 2023-12-31
Authors: Oishi, S., Takahara, A., Nakatsu, T.
PDB entry 8xo4: Crystal structure of measles virus fusion inhibitor M1EK complexed with F protein HR1 (HR1-42) (P21 space group)
Classification: ANTIVIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.362 Å
Deposited: 2023-12-31
Authors: Oishi, S., Takahara, A., Nakatsu, T.
PDB entry 8xo5: Crystal structure of measles virus fusion inhibitor MEK28 complexed with F protein HR1 (HR1-40) (H3 space group)
Classification: ANTIVIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.205 Å
Deposited: 2023-12-31
Authors: Oishi, S., Takahara, A., Nakatsu, T.
PDB entry 8xo6: Crystal structure of measles virus fusion inhibitor MEK35GE complexed with F protein HR1 (HR1-42) (P21212 space group)
Classification: ANTIVIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.457 Å
Deposited: 2023-12-31
Authors: Oishi, S., Takahara, A., Nakatsu, T.
PDB entry 8xo7: Crystal structure of measles virus fusion inhibitor MEK35GE complexed with F protein HR1 (HR1-42) (P2 space group)
Classification: ANTIVIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.165 Å
Deposited: 2023-12-31
Authors: Oishi, S., Takahara, A., Nakatsu, T.
PDB entry 8xo8: Crystal structure of measles virus fusion inhibitor MEK35GT complexed with F protein HR1 (HR1-42) (P21 space group)
Classification: ANTIVIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.846 Å
Deposited: 2023-12-31
Authors: Oishi, S., Takahara, A., Nakatsu, T.
PDB entry 8xo9: VMAT2 complex with noradrenaline in cytosol-facing state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-12-31
Authors: Jiang, D.H., Wu, D.
PDB entry 8xoa: VMAT2 complex with MPP+
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2023-12-31
Authors: Jiang, D.H., Wu, D.
PDB entry 8xob: VMAT2 protonated state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2023-12-31
Authors: Jiang, D.H., Wu, D.
PDB entry 8xoc: beta-1,4-galacosyltransferase
Classification: TRANSFERASE
Source organism: Aggregatibacter actinomycetemcomitans NUM4039
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-12-31
Authors: Luo, G., Huang, Z., Chen, J., Hou, X., Zhu, Y., Ni, D., Xu, W., Zhang, W., Rao, Y., Mu, W.
PDB entry 8xod: ThDP-dependent HKA synthase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Brevibacillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-01-01
Authors: Yu, J.H., Liu, T.
PDB entry 8xof: Cryo-EM structure of Lys05 bound GPR30-Gq complex structure
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-01-01
Authors: Liu, H., Xu, P., Xu, H.E.
PDB entry 8xog: Cryo-EM structure of apo-GPR30-Gq complex structure
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-01-01
Authors: Liu, H., Xu, P., Xu, H.E.
PDB entry 8xoh: Cryo-EM structure of GPR30-Gq complex structure in the presence of E2
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-01
Authors: Liu, H., Xu, P., Xu, H.E.
PDB entry 8xoi: Cryo-EM structure of GPR30-Gq complex structure in the presence of fulvestrant
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-01
Authors: Liu, H., Xu, P., Xu, H.E.
PDB entry 8xoj: Cryo-EM structure of GPR30-Gq complex structure in the presence of G-1
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-01
Authors: Liu, H., Xu, P., Xu, H.E.
PDB entry 8xok: Cryo-EM structure of human ABCC4
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-01-01
Authors: Zhang, P.F., Liu, Z.
PDB entry 8xol: Cryo-EM structure of human ABCC4 with ANP bound in NBD1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-01-01
Authors: Zhang, P.F., Liu, Z.
PDB entry 8xom: Cryo-EM structure of human ABCC4 in complex with ANP-bound in NBD1 and METHOTREXATE
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-01-01
Authors: Zhang, P.F., Liu, Z.
PDB entry 8xon: Cryo-EM structure of the ClpC1:ClpP1P2 degradation complex in Streptomyces hawaiiensis
Classification: HYDROLASE
Source organism: Bos taurus; Streptomyces hawaiiensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.96 Å
Deposited: 2024-01-01
Authors: Xu, X., Long, F.
PDB entry 8xoo: Cryo-EM structure of the ClpC1:ClpP1P2 degradation complex in Streptomyces hawaiiensis
Classification: HYDROLASE
Source organism: Bos taurus; Streptomyces hawaiiensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.84 Å
Deposited: 2024-01-01
Authors: Xu, X., Long, F.
PDB entry 8xop: Cryo-EM structure of ClpP1P2 in complex with ADEP1 from Streptomyces hawaiiensis
Classification: HYDROLASE
Source organism: Streptomyces hawaiiensis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-01-02
Authors: Xu, X., Long, F.
PDB entry 8xoq: Human Calcium and Integrin Binding Protein 2 (CIB2) Fusion to TMC1 CBD-1 domain at 2.4 Angstroms resolution
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2024-01-02
Authors: Li, Y.H., Chen, J.S., Zhang, X., Wang, C.
PDB entry 8xor: Cryo-EM structure of the tethered agonist-bound human PAR1-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus; Rattus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-01-02
Authors: Guo, J., Zhang, Y.
PDB entry 8xos: Cryo-EM structure of the tethered agonist-bound human PAR1-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus; Rattus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-02
Authors: Guo, J., Zhang, Y.
PDB entry 8xot: Prohead portal of bacteriophage lambda
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2024-01-02
Authors: Wang, J.W., Gu, Z.W.
PDB entry 8xou: Prohead portal vertex of bacteriophage lambda
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.58 Å
Deposited: 2024-01-02
Authors: Wang, J.W., Gu, Z.W.
PDB entry 8xov: The Crystal Structure of N-terminal kinase domain of human RSK-1 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-01-02
Authors: Wang, F., Cheng, W., Lv, Z., Meng, Q., Zhang, B.
PDB entry 8xow: Mature virion portal of bacteriophage lambda
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2024-01-02
Authors: Wang, J.W., Gu, Z.W.
PDB entry 8xox: The Crystal Structure of FAK2 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-01-02
Authors: Wang, F., Cheng, W., Lv, Z., Ju, C., Wang, J.
PDB entry 8xoy: The Crystal Structure of PTP1B from Biortus.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-01-02
Authors: Wang, F., Cheng, W., Lv, Z., Meng, Q., Li, J.
PDB entry 8xp0: Cryo-EM structure of the protomers of the C ring in the CCW state
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-01-02
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8xp1: Cryo-EM structure of the protomers of the C ring in the CW state
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2024-01-02
Authors: Tan, J.X., Zhang, L., Zhou, Y., Zhu, Y.Q.
PDB entry 8xp2: Cryo-EM structure of the human 40S ribosome with LARP1
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-02
Authors: Huang, Z., Ye, X., Li, Y., Cheng, J.
PDB entry 8xp3: Cryo-EM structure of the human 40S ribosome with LARP1 and LRRC47
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-01-02
Authors: Huang, Z., Ye, X., Li, Y., Cheng, J.
PDB entry 8xp4: Crystal Structure of human lysyl-tRNA synthetase with acetyllysine
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-01-03
Authors: Zhang, X., Li, N., Guo, Y.R., Ouyang, Z.
PDB entry 8xp5: The Crystal Structure of p53/BCL-xL fusion complex from Biortus.
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-01-03
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Bao, C.
PDB entry 8xp6: 2OG-Fe(II) oxygenase-ColD
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces collinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-01-03
Authors: Zhang, B., Shi, J., Zhang, Y., Ge, H.M.
PDB entry 8xp8: Crystal structure of d(ACGmCCGT/ACGGCGT) in complex with Echinomycin
Classification: DNA/ANTIBIOTIC
Source organism: Streptomyces echinatus.; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-01-03
Authors: Hou, M.H., Lin, S.M., Neidle, H.
PDB entry 8xp9: Crystal structure of d(ACGCCGT/ACGGCGT)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-01-03
Authors: Hou, M.H., Lin, S.M., Lin, Y.J., Neidle, S.
PDB entry 8xpa: Crystal structure of d(ACGmCCGT/ACGGCGT)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-01-03
Authors: Hou, M.H., Lin, S.M., Neidle, S.
PDB entry 8xpb: Crystal structure of d(ACGCCGT/ACGGCGT) in complex with Echinomycin
Classification: DNA/ANTIBIOTIC
Source organism: Streptomyces echinatus.; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-01-03
Authors: Hou, M.H., Huang, H.T., Lin, S.M., Neidle, S.
PDB entry 8xpc: Crystal structure of Tris-bound TsaBgl (DATA I)
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum JW/SL-YS485
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-01-03
Authors: Nam, K.H.
PDB entry 8xpd: Crystal structure of Tris-bound TsaBgl (DATA II)
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum JW/SL-YS485
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-03
Authors: Nam, K.H.
PDB entry 8xpe: Crystal structure of Tris-bound TsaBgl (DATA III)
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum JW/SL-YS485
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-01-03
Authors: Nam, K.H.
PDB entry 8xpf: 2OG-Fe(II) oxygenase-ColD in complex with collinodins
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces collinus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-01-03
Authors: Zhang, B., Shi, J., Zhang, Y., Ge, H.M.
PDB entry 8xpg: The Crystal Structure of polo box domain of Plk4 from Biortus.
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-01-03
Authors: Wang, F., Cheng, W., Lv, Z., Meng, Q., Zhang, B.
PDB entry 8xph: Marine Planctomycetes laminarinase PtLam
Classification: HYDROLASE
Source organism: Planctomycetes bacterium TBK1r
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-01-03
Authors: Yang, J.
PDB entry 8xpi: Structure of the C-terminal domain of nsp4 from PEDV
Classification: VIRAL PROTEIN
Source organism: Porcine epidemic diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2024-01-03
Authors: Zhang, D., Zhang, Z.T., Shi, Y.J., Peng, G.Q.
PDB entry 8xpk: Marine bacterial laminarinase PtLam mutant E154A in complex with laminatriose
Classification: HYDROLASE
Source organism: Planctomycetes bacterium TBK1r
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-01-03
Authors: Yang, J.
PDB entry 8xpm: Mature virion portal of phage lambda with DNA
Classification: VIRAL PROTEIN/DNA
Source organism: Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-01-04
Authors: Wang, J.W., Gu, Z.W.
PDB entry 8xpn: The Crystal Structure of USP8 from Biortus.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-01-04
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Wang, J.
PDB entry 8xpo: Cryo-EM structure of Lassa virus RdRP elongation complex with the NTP form of compound HNC-1664 bound in the active site
Classification: REPLICATION
Source organism: Lassa virus Josiah; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-01-04
Authors: Jing, X., Gong, P.
PDB entry 8xpp: Crystal structure of the enterovirus 71 RdRP elongation complex with the nucleoside monophosphate form of compound HNC-1664 at product position -1 (post-translocation state)
Classification: REPLICATION
Source organism: Enterovirus A71; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-01-04
Authors: Zhong, Y., Gong, P.
PDB entry 8xpq: Structure of the sea urchin spSLC9C1 in state-2 w/o cAMP dimer
Classification: TRANSPORT PROTEIN
Source organism: Strongylocentrotus purpuratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-04
Authors: Qu, H., Zheng, X.
PDB entry 8xps: Structure of Nipah virus Bangladesh string G protein ectodomain monomer bound to single-domain antibody n425 at 3.22 Angstroms overall resolution
Classification: VIRAL PROTEIN
Source organism: Henipavirus nipahense; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2024-01-04
Authors: Sun, L., Chen, Z., Sun, Y., Mao, Q.
PDB entry 8xpt: The Crystal Structure of EHMT1 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2024-01-04
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Bao, C.
PDB entry 8xpu: Overall structure of the LAT1-4F2hc bound with JPH203
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-04
Authors: Hu, Z., Yan, R.
PDB entry 8xpv: The Crystal Structure of EphA2 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-01-04
Authors: Wang, F., Cheng, W., Lv, Z., Meng, Q., Xu, Y.
PDB entry 8xpw: Marine bacterial laminarinase PtLam treated with 100 mM EDTA
Classification: HYDROLASE
Source organism: Planctomycetes bacterium TBK1r
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-01-04
Authors: Yang, J.
PDB entry 8xpx: The Crystal Structure of PARP12 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-01-04
Authors: Wang, F., Cheng, W., Lv, Z., Qi, J., Shen, Z.
PDB entry 8xpy: Structure of Nipah virus Malaysia string G protein ectodomain monomer bound to single-domain antibody n425 at 3.63 Angstroms overall resolution
Classification: VIRAL PROTEIN
Source organism: Henipavirus nipahense; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2024-01-04
Authors: Sun, L., Chen, Z., Sun, Y., Mao, Q.
PDB entry 8xpz: The Crystal Structure of TTBK1 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-01-04
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Ni, C.
PDB entry 8xq0: Crystal structure of spleen tyrosine kinase(SYK)in complex with SKI-G-1653
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-01-04
Authors: Bong, S.M., Lee, B.I.
PDB entry 8xq1: Crystal structure of spleen tyrosine kinase(SYK) in complex with SKI-G-1673
Classification: SIGNALING PROTEIN-INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-01-04
Authors: Bong, S.M., Lee, B.I.
PDB entry 8xq2: Crystal structure of spleen tyrosine kinase(SYK)in complex with SKI-G-1693
Classification: SIGNALING PROTEIN-INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-01-04
Authors: Bong, S.M., Lee, B.I.
PDB entry 8xq3: Structure of Nipah virus Bangladesh string G protein ectodomain tetramer bound to single-domain antibody n425 at 5.87 Angstroms overall resolution
Classification: VIRAL PROTEIN
Source organism: Henipavirus nipahense; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.87 Å
Deposited: 2024-01-04
Authors: Sun, L., Chen, Z., Sun, Y., Mao, Q.
PDB entry 8xq4: Structure of the sea urchin spSLC9C1 in state-2 w/o cAMP protomer
Classification: TRANSPORT PROTEIN
Source organism: Strongylocentrotus purpuratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-01-04
Authors: Qu, H., Zheng, X.
PDB entry 8xq5: Structure of the sea urchin spSLC9C1 in state-3 w/o cAMP dimer
Classification: TRANSPORT PROTEIN
Source organism: Strongylocentrotus purpuratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-01-04
Authors: Qu, H., Zheng, X.
PDB entry 8xq6: Structure of the sea urchin spSLC9C1 in state-3 w/o cAMP protomer
Classification: TRANSPORT PROTEIN
Source organism: Strongylocentrotus purpuratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-01-04
Authors: Qu, H., Zheng, H.
PDB entry 8xq7: Structure of the sea urchin spSLC9C1 in state-1 w/ cAMP dimer
Classification: TRANSPORT PROTEIN
Source organism: Strongylocentrotus purpuratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-01-04
Authors: Qu, H., Zheng, X.
PDB entry 8xq8: Structure of the sea urchin spSLC9C1 in state-1 w/ cAMP protomer
Classification: TRANSPORT PROTEIN
Source organism: Strongylocentrotus purpuratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-01-04
Authors: Qu, H., Zheng, X.
PDB entry 8xq9: Structure of the sea urchin spSLC9C1 in state-2 w/ cAMP dimer
Classification: TRANSPORT PROTEIN
Source organism: Strongylocentrotus purpuratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2024-01-04
Authors: Qu, H., Zheng, X.
PDB entry 8xqa: Structure of the sea urchin spSLC9C1 in state-3 w/ cAMP dimer
Classification: TRANSPORT PROTEIN
Source organism: Strongylocentrotus purpuratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2024-01-04
Authors: Qu, H., Zheng, X.
PDB entry 8xqb: Mature virion portal vertex of bacteriophage lambda
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2024-01-05
Authors: Wang, J.W., Gu, Z.W.
PDB entry 8xqc: Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated PAF15 and hemimethylated DNA analog
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2024-01-05
Authors: Kikuchi, A., Hayashi, G., Kori, S., Arita, K.
PDB entry 8xqd: The Crystal Structure of PTPRG from Biortus.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-01-05
Authors: Wang, F., Cheng, W., Lv, Z., Ju, C., Ni, C.
PDB entry 8xqe: Cryo-EM structure of human dimeric APJR-Gi complex with apelin-13.
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2024-01-05
Authors: Yue, Y., Liu, L.E., Wu, L.J., Xu, F.
PDB entry 8xqf: Cryo-EM structure of human monomeric APJR-Gi complex with apelin-13.
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2024-01-05
Authors: Yue, Y., Liu, L.E., Wu, L.J., Xu, F.
PDB entry 8xqi: Cryo-EM structure of human dimeric Apelin receptor.
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2024-01-05
Authors: Yue, Y., Liu, L.E., Wu, L.J., Xu, F.
PDB entry 8xqj: Cryo-EM structure of human dimeric APJR complex with antagonistic antibody
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-01-05
Authors: Yue, Y., Liu, L.E., Wu, L.J., Xu, F.
PDB entry 8xqk: The Crystal Structure of Apaf from Biortus.
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-01-05
Authors: Wang, F., Cheng, W., Lv, Z., Ju, C., Ni, C.
PDB entry 8xql: Structure of human class T GPCR TAS2R14-miniGs/gust complex with Aristolochic acid A.
Classification: SIGNALING PROTEIN
Source organism: Clostridium perfringens; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2024-01-05
Authors: Hu, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8xqn: Structure of human class T GPCR TAS2R14-DNGi complex with Aristolochic acid A.
Classification: SIGNALING PROTEIN
Source organism: Clostridium perfringens; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-01-05
Authors: Hu, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8xqo: Structure of human class T GPCR TAS2R14-Gi complex with Aristolochic acid A.
Classification: SIGNALING PROTEIN
Source organism: Clostridium perfringens; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2024-01-05
Authors: Hu, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8xqp: Structure of human class T GPCR TAS2R14-Gustducin complex with Aristolochic acid A.
Classification: SIGNALING PROTEIN
Source organism: Clostridium perfringens; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-01-05
Authors: Hu, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8xqr: Structure 2 of human class T GPCR TAS2R14-miniGs/gust complex with Flufenamic acid.
Classification: SIGNALING PROTEIN
Source organism: Clostridium perfringens; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-05
Authors: Hu, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8xqs: Structure of human class T GPCR TAS2R14-DNGi complex with Flufenamic acid.
Classification: SIGNALING PROTEIN
Source organism: Clostridium perfringens; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-05
Authors: Hu, X.L., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8xqt: Structure of human class T GPCR TAS2R14-Gi complex.
Classification: SIGNALING PROTEIN
Source organism: Clostridium perfringens; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-01-05
Authors: Hu, X.L., Pei, Y., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 8xqu: The Crystal Structure of ClpC1-NTD from Biortus.
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-01-05
Authors: Wang, F., Cheng, W., Lv, Z., Ju, C., Ni, C.
PDB entry 8xqv: Crystal structure of AtHPPD-YH23025 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.698 Å
Deposited: 2024-01-05
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8xqw: Cryo-EM structure of the Ycf2-FtsHi motor complex from Chlamydomonas reinhardtii in AMPPNP bound state
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-01-10
Authors: Liang, K., Zhan, X., Wu, J., Yan, Z.
PDB entry 8xqx: Cryo-EM structure of the Ycf2-FtsHi motor complex from Chlamydomonas reinhardtii in apo state
Classification: MEMBRANE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-01-05
Authors: Liang, K., Zhan, X., Wu, J., Yan, Z.
PDB entry 8xqy: Crystal structure of AtHPPD-Y181183 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.003 Å
Deposited: 2024-01-05
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8xqz: Crystal structure of AtHPPD-NHPA complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.783 Å
Deposited: 2024-01-05
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8xr0: Crystal structure of AtHPPD-YH21618 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2024-01-05
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8xr2: Crystal structure of AKRtyl-apo1
Classification: OXIDOREDUCTASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2024-01-06
Authors: Lin, S., Dai, S., Xiao, Z.
PDB entry 8xr3: Crystal structure of AKRtyl-apo2
Classification: OXIDOREDUCTASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2024-01-06
Authors: Lin, S., Dai, S., Xiao, Z.
PDB entry 8xr4: Crystal structure of AKRtyl-NADP(H) complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-01-06
Authors: Lin, S., Dai, S., Xiao, Z.
PDB entry 8xr5: Crystal structure of PD-L1 complexed with small molecule inhibitor X18
Classification: IMMUNOSUPPRESSANT/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-01-06
Authors: Liu, L.
PDB entry 8xr6: Cryo-EM structure of cryptophyte photosystem II
Classification: PHOTOSYNTHESIS
Source organism: Chroomonas placoidea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2024-01-06
Authors: Li, K., Zhao, L.S., Zhang, Y.Z., Liu, L.N.
PDB entry 8xr7: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Korea/426/1968 H2N2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2024-01-06
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xr8: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2024-01-06
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xr9: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-01-06
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xra: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2024-01-06
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xrb: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2024-01-06
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xrc: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-01-06
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xrd: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2024-01-06
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xrf: The crystal structure of AsfvTopII in complex with G-DNA
Classification: REPLICATION
Source organism: African swine fever virus BA71V
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2024-01-07
Authors: Yang, J., Gan, J.H.
PDB entry 8xrg: The crystal structure of AsfvTopII ATPase domain in complex with ADP
Classification: REPLICATION
Source organism: African swine fever virus BA71V
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-01-07
Authors: Yang, J., Gan, J.H.
PDB entry 8xrh: The crystal structure of AsfvTopII ATPase domain in complex with AMPPNP
Classification: REPLICATION
Source organism: African swine fever virus BA71V
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-01-07
Authors: Yang, J., Gan, J.H.
PDB entry 8xri: The crystal structure of AsfvTopII in complex with both G-DNA and T-DNA
Classification: REPLICATION
Source organism: African swine fever virus BA71V
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2024-01-07
Authors: Yang, J., Gan, J.H.
PDB entry 8xrj: RNA polymerase II elongation complex with upstream nucleosome extracted from human nuclei
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-01-07
Authors: Kujirai, T., Kato, J., Yamamoto, K., Hirai, S., Negishi, L., Ogasawara, M., Takizawa, Y., Kurumizaka, H.
PDB entry 8xrm: RNA polymerase II elongation complex with DSIF, SPT6, and ELOF1 transcribing genomic DNA extracted from human nuclei
Classification: TRANSCRIPTION/RNA/DNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2024-01-07
Authors: Kujirai, T., Kato, J., Yamamoto, K., Hirai, S., Negishi, L., Ogasawara, M., Takizawa, Y., Kurumizaka, H.
PDB entry 8xrp: The Cryo-EM structure of IL-12, receptor subunit beta-1 and receptor subunit beta-2 complex
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2024-01-07
Authors: Chen, H.Q., Wang, X.Q., Ge, X.F., Zeng, J.W., Wang, J.W.
PDB entry 8xrq: SARS-CoV-2 BA.1 spike RBD in complex bound with VacBB-639
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.19 Å
Deposited: 2024-01-08
Authors: Liu, C.C., Ju, B., Zhang, Z.
PDB entry 8xrr: A complex structure of PDGFRA with an inhibitor RH140
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2024-01-08
Authors: Zhu, S.J., Bi, S.Z.
PDB entry 8xrt: The crystal structure of a GH3 enzyme CcBgl3B
Classification: HYDROLASE
Source organism: Cellulosimicrobium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-01-08
Authors: Su, J.Y.
PDB entry 8xru: The crystal structure of a GH3 enzyme CcBgl3B with glycerol
Classification: HYDROLASE
Source organism: Cellulosimicrobium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-01-08
Authors: Su, J.Y.
PDB entry 8xrv: The crystal structure of a GH3 enzyme CcBgl3B with glucose
Classification: HYDROLASE
Source organism: Cellulosimicrobium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-01-08
Authors: Su, J.Y.
PDB entry 8xrw: crystal structure of HpPPAT in complex with ATP
Classification: TRANSFERASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-01-08
Authors: Yin, H.S.
PDB entry 8xrx: The crystal structure of a GH3 enzyme CcBgl3B with glucose and gentiobiose
Classification: HYDROLASE
Source organism: Cellulosimicrobium cellulans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-01-08
Authors: Su, J.Y.
PDB entry 8xry: Cryo-EM structure of OSCA3.1-1.1ver(Y367N-G454S-Y458I)-open/open state
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2024-01-08
Authors: Zhang, Y., Han, Y.
PDB entry 8xrz: Crystal structure of a novel PU plastic degradation enzyme with ligand from Thermaerobacter marianensis
Classification: HYDROLASE
Source organism: Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-01-08
Authors: Li, Z.S., Wang, H., Zheng, Z.R., Cong, L., Chen, Y.Y., Han, X., Wei, R., Uwe, B., liu, W.D.
PDB entry 8xs0: Cryo-EM structure of OSCA3.1-1.1ver(Y367N-G454S-Y458I)-open/'desensitized' state
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2024-01-08
Authors: Zhang, Y., Han, Y.
PDB entry 8xs1: Crystal structure of Fab fragment of anti-osteocalcin antibody KTM219 complexed with C-terminal peptide antigen
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-01-08
Authors: Komatsu, M., Dong, J., Ueda, H., Arai, R.
PDB entry 8xs2: Crystal structure of Fab fragment of anti-osteocalcin C-terminal peptide antibody KTM219 with addition of fluorophore TAMRA
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2024-01-08
Authors: Yazaki, S., Ueda, H., Arai, R.
PDB entry 8xs3: Structure of MPXV B6 and D68 fab complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2024-01-08
Authors: wu, L.L., Sun, J.Q.
PDB entry 8xs4: Cryo-EM structure of OSCA1.2-DOPC-1:20-contracted1 state
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-01-08
Authors: Zhang, Y., Han, Y.
PDB entry 8xs5: Cryo-EM structure of OSCA1.2-DOPC-1:20-contracted2 state
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2024-01-08
Authors: Zhang, Y., Han, Y.
PDB entry 8xs6: Crystal structure of the DNA-bound AHR-ARNT heterodimer in complex with Tapinarof
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2024-01-09
Authors: Diao, X., Shang, Q., Wu, D.
PDB entry 8xs7: Crystal structure of the DNA-bound AHR-ARNT heterodimer in complex with FICZ
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2024-01-09
Authors: Diao, X., Shang, Q., Wu, D.
PDB entry 8xs8: Crystal structure of the DNA-bound AHR-ARNT heterodimer in complex with Benzo[a]pyrene
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2024-01-09
Authors: Diao, X., Shang, Q., Wu, D.
PDB entry 8xs9: Crystal structure of the DNA-bound AHR-ARNT heterodimer in complex with beta-Naphthoflavone
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.801 Å
Deposited: 2024-01-09
Authors: Diao, X., Shang, Q., Wu, D.
PDB entry 8xsa: Crystal structure of the DNA-bound AHR-ARNT heterodimer in complex with Indigo
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.597 Å
Deposited: 2024-01-09
Authors: Diao, X., Shang, Q., Wu, D.
PDB entry 8xsb: Crystal structure of the DNA-bound AHR-ARNT heterodimer in complex with Indirubin
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2024-01-09
Authors: Diao, X., Shang, Q., Wu, D.
PDB entry 8xsc: PPAT in complex with Ppant
Classification: TRANSFERASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-01-09
Authors: Yin, H.S.
PDB entry 8xsd: BA.5 Spike complex with CR9
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2024-01-09
Authors: Feng, L.L.
PDB entry 8xse: SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-01-09
Authors: Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.
PDB entry 8xsf: SARS-CoV-2 RBD + IMCAS-364 + hACE2
Classification: VIRAL PROTEIN/HYDROLASE/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.16 Å
Deposited: 2024-01-09
Authors: Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.
PDB entry 8xsg: Crystal structure of the Actinobacillus minor NM305 glucosyltransferase in complex with UDP
Classification: TRANSFERASE
Source organism: Actinobacillus minor NM305
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-01-09
Authors: Yamasaki, T., Kohda, D.
PDB entry 8xsh: Crystal structure of the Actinobacillus minor NM305 glucosyltransferase
Classification: TRANSFERASE
Source organism: Actinobacillus minor NM305
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-01-09
Authors: Yamasaki, T., Kohda, D.
PDB entry 8xsi: SARS-CoV-2 RBD + IMCAS-364 (Local Refinement)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-01-09
Authors: Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.
PDB entry 8xsj: SARS-CoV-2 Omicron BA.4 RBD + IMCAS-316 + ACE2
Classification: VIRAL PROTEIN/HYDROLASE/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-01-09
Authors: Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.
PDB entry 8xsk: crystal structure of PPAT
Classification: TRANSFERASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-01-09
Authors: Yin, H.S.
PDB entry 8xsl: SARS-CoV-2 spike + IMCAS-123
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-09
Authors: Tong, Z., Cui, Y., Xie, Y., Tong, J., Gao, G.F., Qi, J.
PDB entry 8xsm: transporter
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2024-01-09
Authors: Jiang, D.H., Wang, K.
PDB entry 8xsn: transporter
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-01-09
Authors: Jiang, D.H., Wang, K.