LiteFold/PDB huggingface dataset:
PDB entry 8pgr: Crystal structure of the metallo-beta-lactamase VIM1 with 3270
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pgs: Crystal structure of the metallo-beta-lactamase VIM1 with 3380
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pgt: Crystal structure of the metallo-beta-lactamase VIM1 with 3393
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pgu: Crystal structure of the metallo-beta-lactamase VIM1 with 3394
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pgv: Crystal structure of the metallo-beta-lactamase VIM1 with 3396
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pgw: Crystal structure of the metallo-beta-lactamase VIM1 with 3460
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pgx: Crystal structure of the metallo-beta-lactamase VIM1 with 3461
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pgy: Crystal structure of the metallo-beta-lactamase VIM1 with 3462
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8pgz: Crystal structure of the metallo-beta-lactamase VIM1 with 3528
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8ph0: Crystal structure of the metallo-beta-lactamase VIM1 with 3637
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8ph1: Crystal structure of the metallo-beta-lactamase VIM1 with 3708
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8ph2: Crystal structure of the metallo-beta-lactamase VIM1 with 3746
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8ph3: Crystal structure of the metallo-beta-lactamase VIM1 with 3747
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2023-06-18
Authors: Calvopina, K., Brem, J., Farley, A.J.M., Allen, M.D., Schofield, C.J.
PDB entry 8ph4: Co-Crystal structure of the SARS-CoV2 main protease Nsp5 with an Uracil-carrying X77-like inhibitor
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-06-18
Authors: Barthel, T., Altincekic, N., Jores, N., Wollenhaupt, J., Weiss, M.S., Schwalbe, H.
PDB entry 8ph5: X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DPhF)2(O2CCH3)2] in condition B
Classification: PROTEIN BINDING
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2023-06-19
Authors: Teran, A., Ferraro, G., Merlino, A.
PDB entry 8ph6: X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(DPhF)(CO3)3] in condition B
Classification: PROTEIN BINDING
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2023-06-19
Authors: Teran, A., Ferraro, G., Merlino, A.
PDB entry 8ph7: X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DPhF)(O2CCH3)3] in condition A
Classification: PROTEIN BINDING
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.406 Å
Deposited: 2023-06-19
Authors: Teran, A., Ferraro, G., Merlino, A.
PDB entry 8ph8: X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DPhF)2(O2CCH3)2] in condition A
Classification: PROTEIN BINDING
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2023-06-19
Authors: Teran, A., Ferraro, G., Merlino, A.
PDB entry 8ph9: E. coli RNA polymerase paused at ops site (non-complementary scaffold)
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-06-19
Authors: Zuber, P.K., Said, N., Hilal, T., Loll, B., Wahl, M.C., Knauer, S.H.
PDB entry 8pha: O(S)-methyltransferase from Pleurotus sapidus
Classification: TRANSFERASE
Source organism: Pleurotus sapidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2023-06-19
Authors: Korf, L., Essen, L.-O.
PDB entry 8phb: Crystal structure of apo Cami1
Classification: HYDROLASE
Source organism: Allochromatium vinosum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-06-19
Authors: Tamulaitiene, G., Tamulaitis, G., Mogila, I., Keda, K.
PDB entry 8phd: Structure of Human Cdc123 bound to domain 3 of eIF2 gamma and ATP
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2023-06-19
Authors: Schmitt, E., Mechulam, Y., Cardenal Peralta, C., Fagart, J., Seufert, W.
PDB entry 8phe: ACAD9-WT in complex with ECSIT-CTER
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-06-19
Authors: McGregor, L., Acajjaoui, S., Desfosses, A., Saidi, M., Bacia-Verloop, M., Schwarz, J.J., Juyoux, P., Von Velsen, J., Bowler, M.W., McCarthy, A., Kandiah, E., Gutsche, I., Soler-Lopez, M.
PDB entry 8phf: Cryo-EM structure of human ACAD9-S191A
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-06-19
Authors: McGregor, L., Acajjaoui, S., Desfosses, A., Saidi, M., Bacia-Verloop, M., Schwarz, J.J., Juyoux, P., Von Velsen, J., Bowler, M.W., McCarthy, A., Kandiah, E., Gutsche, I., Soler-Lopez, M.
PDB entry 8phh: Cryo-EM structure of Atkinsonella Hypoxylon Virus-like particles.
Classification: VIRUS LIKE PARTICLE
Source organism: Atkinsonella hypoxylon
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-06-19
Authors: Byrne, M.J., Sainsbury, F.
PDB entry 8phi: Crystal structure of prefusion-stabilized RSV F Variant DS-Cav1 in complex with Lonafarnib
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.289 Å
Deposited: 2023-06-19
Authors: Rajak, M., Krey, T.
PDB entry 8phj: cA4-bound Cami1 in complex with 70S ribosome
Classification: RIBOSOME
Source organism: Allochromatium vinosum; Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2023-06-20
Authors: Tamulaitiene, G., Mogila, I., Sasnauskas, G., Tamulaitis, G.
PDB entry 8phk: fully recruited RfaH bound to E. coli transcription complex paused at ops site
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-06-20
Authors: Zuber, P.K., Said, N., Hilal, T., Loll, B., Wahl, M.C., Knauer, S.H.
PDB entry 8phl: Human carbonic anhydrase II containing 4-fluorophenylalanine
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-06-20
Authors: Pham, L.B.T., Costantino, A., Barbieri, L., Calderone, V., Luchinat, E., Banci, L.
PDB entry 8phm: Oxalate-bound cobalt(II) human carbonic anhydrase II
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-06-20
Authors: Gigli, L., Malanho Silva, J., Cerofolini, L., Macedo, A.L., Geraldes, C.F.G.C., Suturina, E.A., Calderone, V., Fragai, M., Parigi, G., Ravera, E., Luchinat, C.
PDB entry 8phn: Receiver domain from hybrid Histidine Kinase 3 from Chaetomium thermophilum
Classification: SIGNALING PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-06-20
Authors: Paredes-Martinez, F., Casino, P.
PDB entry 8pho: Portal from the Borrelia bacteriophage BB1 procapsid
Classification: VIRAL PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.34 Å
Deposited: 2023-06-20
Authors: Rumnieks, J., Fuzik, T., Tars, K.
PDB entry 8php: Portal from the Borrelia bacteriophage BB1 procapsid with bound scaffold protein
Classification: VIRAL PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2023-06-20
Authors: Rumnieks, J., Fuzik, T., Tars, K.
PDB entry 8phq: Top cap of the Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell
Classification: VIRAL PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2023-06-20
Authors: Rumnieks, J., Fuzik, T., Tars, K.
PDB entry 8phr: Middle part of the Borrelia bacteriophage BB1 procapsid, tenfold-symmetrized outer shell
Classification: VIRAL PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2023-06-20
Authors: Rumnieks, J., Fuzik, T., Tars, K.
PDB entry 8phs: Bottom cap of the Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell
Classification: VIRAL PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2023-06-20
Authors: Rumnieks, J., Fuzik, T., Tars, K.
PDB entry 8pht: Scaffold rings inside the Borrelia bacteriophage BB1 procapsid
Classification: VIRAL PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.37 Å
Deposited: 2023-06-20
Authors: Rumnieks, J., Fuzik, T., Tars, K.
PDB entry 8phu: Asymmetric structure of the portal-containing cap of the Borrelia bacteriophage BB1 procapsid
Classification: VIRAL PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.41 Å
Deposited: 2023-06-20
Authors: Rumnieks, J., Fuzik, T., Tars, K.
PDB entry 8phv: Structure of Human selenomethionylated Cdc123 bound to domain 3 of eIF2 gamma
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-06-20
Authors: Schmitt, E., Mechulam, Y., Cardenal Peralta, C., Fagart, J., Seufert, W.
PDB entry 8phw: Human OATP1B1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-06-20
Authors: Ciuta, A.-D., Nosol, K., Kowal, J., Mukherjee, S., Ramirez, A.S., Stieger, B., Kossiakoff, A.A., Locher, K.P.
PDB entry 8phx: Receiver Domain of the Hybrid Histidine Kinase Sln1 of Candida albicans
Classification: SIGNALING PROTEIN
Source organism: Candida albicans SC5314
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-06-20
Authors: Paredes-Martinez, F., Casino, P.
PDB entry 8phy: crystal structure of powdery mildews Blumeria graminis f. sp. tritici AVRPM2 (2)
Classification: UNKNOWN FUNCTION
Source organism: Blumeria graminis f. sp. tritici
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2023-06-20
Authors: Cao, Y., Gebauer, J.M., Baumann, U., Chai, J.J.
PDB entry 8phz: Helical reconstruction of CHIKV nsP3 helical scaffolds
Classification: VIRAL PROTEIN
Source organism: Chikungunya virus strain S27-African prototype
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2023-06-20
Authors: Reguera, J., Hons, M., Zimberger, C., Ptchelkine, D., Jones, R., Desfosses, A.
PDB entry 8pi0: NMR2 Structure of KRAS G12V (GMPPNP bound) in complex with 5-(1H-indol-2-l)piperazin-2-one
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-06-20
Authors: Buetikofer, M., Orts, J.
PDB entry 8pi1: Bicyclic INCYPRO Pseudomonas fluorescens esterase
Classification: HYDROLASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-06-20
Authors: Kiehstaller, S., Pearce, N.M., Grossmann, T.N., Hennig, S.
PDB entry 8pi2: Native alpha-1-antitrypsin at 1.5 Angstrom (Cys232Ser)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2023-06-20
Authors: Wang, M., Irving, J.A.
PDB entry 8pi3: Cathepsin S Y132D mutant in complex with NNPI-C10 inhibitor
Classification: ONCOPROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2023-06-21
Authors: Petruzzella, A., Lau, K., Pojer, F., Oricchio, E.
PDB entry 8pi4: Crystal structure of human insulin desB30 precursor with an Alanine-Methionine-Lysine C-peptide in dimer (T2) conformation
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-06-21
Authors: Johansson, E., Schluckebier, G.
PDB entry 8pi5: Crystal structure of human insulin desB30 precursor with an Alanine-Methionine-Lysine C-peptide in hexamer (T3R3) conformation
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2023-06-21
Authors: Johansson, E., Schluckebier, G.
PDB entry 8pi6: Crystal structure of the monomeric zinc free human insulin A22K, B3E, B26E, B29R, desB30 precursor with a Ser-Glu-Asp-Trp-Trp-Arg C-peptide and a Glu-Glu-Gly-Glu-Pro-Arg N-terminal extension
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-06-21
Authors: Johansson, E., Schluckebier, G.
PDB entry 8pi7: DNA binding domain of HNF-1A bound to P2-HNF4A promoter DNA variant (P2 -169C>T)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-06-21
Authors: Kind, L., Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 8pi8: DNA binding domain of HNF-1A bound to P2-HNF4A promoter DNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-06-21
Authors: Kind, L., Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 8pi9: DNA binding domain of HNF-1A bound to P2-HNF4A promoter DNA variant (P2 -181G>A)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-06-21
Authors: Kind, L., Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 8pia: DNA binding domain of HNF-1A bound to P2-HNF4A promoter DNA variant (P2 -181G>T)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-06-21
Authors: Kind, L., Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 8pib: autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex)
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-06-21
Authors: Zuber, P.K., Said, N., Hilal, T., Loll, B., Wahl, M.C., Knauer, S.H.
PDB entry 8pid: backtracked E. coli transcription complex paused at ops site and bound to RfaH
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-06-21
Authors: Zuber, P.K., Said, N., Hilal, T., Loll, B., Wahl, M.C., Knauer, S.H.
PDB entry 8pie: Crystal structure of the human nucleoside diphosphate kinase B domain in complex with the product AT-8500 formed by catalysis of compound AT-9010
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-06-21
Authors: Feracci, M., Chazot, A., Ferron, F., Alvarez, K., Canard, B.
PDB entry 8pif: Fragment 12 in complex with KLHDC2
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.782 Å
Deposited: 2023-06-21
Authors: Boettcher, J., Mayer, M.
PDB entry 8pih: Structure of Api m1 in complex with two nanobodies
Classification: ALLERGEN
Source organism: Apis mellifera; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-06-21
Authors: Aagaard, J.B., Gandini, R., Spillner, E., Miehe, M., Andersen, G.R.
PDB entry 8pii: VHH Z70 mutant 3 in interaction with PHF6 Tau peptide
Classification: IMMUNE SYSTEM
Source organism: Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-06-21
Authors: Dupre, E., Mortelecque, J., NGuyen, M., Hanoulle, X., Landrieu, I.
PDB entry 8pij: Neisseria meningitidis Type IV pilus SB-GATDH variant bound to the C24 nanobody
Classification: PROTEIN FIBRIL
Source organism: Neisseria meningitidis 8013; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-06-21
Authors: Fernandez-Martinez, D., Dumenil, G.
PDB entry 8pil: E. coli transcription complex paused at ops site and bound to RfaH and NusA
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-06-22
Authors: Zuber, P.K., Said, N., Hilal, T., Loll, B., Wahl, M.C., Knauer, S.H.
PDB entry 8pim: fully recruited RfaH bound to E. coli transcription complex paused at ops site (not complementary scaffold)
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-06-22
Authors: Zuber, P.K., Said, N., Hilal, T., Loll, B., Wahl, M.C., Knauer, S.H.
PDB entry 8pin: Crystal structure of Ser33
Classification: CYTOSOLIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2023-06-22
Authors: Perrone, S., Cifuente, J.O., Marina, A., Mastrella, L., Trastoy, B., Linster, C.L., Guerin, M.E.
PDB entry 8pio: Crystal structure of Ser33 in complex with PHP (3-phosphohydroxypyruvate)
Classification: CYTOSOLIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-06-22
Authors: Perrone, S., Cifuente, J.O., Marina, A., Mastrella, L., Trastoy, B., Linster, C.L., Guerin, M.E.
PDB entry 8pip: DNA triplex structure with Polypyridyl Ruthenium Complexes
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-06-22
Authors: Abdullrahman, A., Cardin, C.J., Hall, J.P.
PDB entry 8piq: Crystal Structure of BRD4-BD1 with BI894999
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.117 Å
Deposited: 2023-06-22
Authors: Kessler, D.
PDB entry 8pir: Crystal structure of Ser33 in complex with 3-PGA (3-phosphoglycerate)
Classification: CYTOSOLIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-06-22
Authors: Perrone, S., Cifuente, J.O., Marina, A., Mastrella, L., Trastoy, B., Linster, C.L., Guerin, M.E.
PDB entry 8pis: Crystal structure of Ser33 in complex with L-Serine
Classification: CYTOSOLIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2023-06-22
Authors: Perrone, S., Cifuente, J.O., Marina, A., Mastrella, L., Trastoy, B., Linster, C.L., Guerin, M.E.
PDB entry 8piu: 60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-06-22
Authors: Zdanowicz, R., Afanasyev, P., Boehringer, D., Glockshuber, R.
PDB entry 8piv: Homomeric GluA2 flip R/G-unedited Q/R-edited F231A mutant in tandem with TARP gamma-2, desensitized conformation 1
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2023-06-22
Authors: Zhang, D., Krieger, J.M., Yamashita, K., Greger, I.H.
PDB entry 8piw: Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-NMet2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-06-22
Authors: Alsalman, Z., Girard, E.
PDB entry 8pix: Cryo EM structure of the type 3C polymorph of alpha-synuclein at low pH.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2023-06-22
Authors: Frey, L., Qureshi, B.M., Kwiatkowski, W., Rhyner, D., Greenwald, J., Riek, R.
PDB entry 8piy: NMR2 Structure of KRAS G12V (GMPPNP bound) in complex with (2E)-3-(1H-indol-2-yl)prop-2-enoic acid
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-06-22
Authors: Buetikofer, M., Orts, J.
PDB entry 8piz: Neisseria meningitidis Type IV pilus SB-DATDH variant bound to the C24 nanobody
Classification: PROTEIN FIBRIL
Source organism: Neisseria meningitidis 8013; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2023-06-22
Authors: Fernandez-Martinez, D., Dumenil, G.
PDB entry 8pj0: Pseudomonas aeruginosa FabF C164A mutant in complex with N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)-3-methylbutanamide
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-06-22
Authors: Georgiou, C., Brenk, R., Espeland, L.O.
PDB entry 8pj1: Structure of human 48S translation initiation complex in open codon scanning state (48S-1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-06-22
Authors: Petrychenko, V., Yi, S.-H., Liedtke, D., Peng, B.Z., Rodnina, M.V., Fischer, N.
PDB entry 8pj2: Structure of human 48S translation initiation complex in AUG recognition state after eIF5-induced GTP hydrolysis by eIF2 (48S-2)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-06-22
Authors: Petrychenko, V., Yi, S.-H., Liedtke, D., Peng, B.Z., Rodnina, M.V., Fischer, N.
PDB entry 8pj3: Structure of human 48S translation initiation complex upon transfer of initiator tRNA to eIF5B (48S-3)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-06-22
Authors: Petrychenko, V., Yi, S.-H., Liedtke, D., Peng, B.Z., Rodnina, M.V., Fischer, N.
PDB entry 8pj4: Structure of human 48S translation initiation complex after eIF5 release (48S-4)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-06-22
Authors: Petrychenko, V., Yi, S.-H., Liedtke, D., Peng, B.Z., Rodnina, M.V., Fischer, N.
PDB entry 8pj5: Structure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-06-22
Authors: Petrychenko, V., Yi, S.-H., Liedtke, D., Peng, B.Z., Rodnina, M.V., Fischer, N.
PDB entry 8pj6: Structure of human 48S translation initiation complex with initiator tRNA, eIF1A and eIF3 (off-pathway)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-06-22
Authors: Petrychenko, V., Yi, S.-H., Liedtke, D., Peng, B.Z., Rodnina, M.V., Fischer, N.
PDB entry 8pj7: MLLT3 in complex with compound PFI-6
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2023-06-22
Authors: Raux, B., Diaz-Saez, L., Huber, K.V.M., Fedorov, O., Owen, D.R., Londregan, A.T., Bountra, C., Edwards, A., Arrowsmith, C.
PDB entry 8pj8: FKBP51FK1 F67E/K60Orn (i, i+7) in complex with SAFit1
Classification: ISOMERASE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-06-23
Authors: Meyners, C., Charalampidou, A., Hausch, F.
PDB entry 8pj9: Cas9 bound to cognate DNA, Streptococcus thermophilus DGCC 7710 CRISPR3 system
Classification: RNA BINDING PROTEIN
Source organism: Streptococcus thermophilus DGCC 7710; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2023-06-23
Authors: Sasnauskas, G., Gaizauskaite, U., Tamulaitiene, G.
PDB entry 8pja: FKBP51FK1 F67E/K58 (i, i+9) in complex with SAFit1
Classification: ISOMERASE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-06-23
Authors: Meyners, C., Charalampidou, A., Hausch, F.
PDB entry 8pjb: Cryo-EM structure of MLE in complex with UUC RNA and ADP
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2023-06-23
Authors: Jagtap, P.K.A., Hennig, J.
PDB entry 8pjc: Crystal structure of human insulin desB30 precursor with an Alanine-Alanine-Lysine C-peptide in dimer (T2) conformation
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-06-23
Authors: Schluckebier, G., Johansson, E.
PDB entry 8pjd: Crystal Structure of Mus musculus Protein Arginine Methyltransferase 2 94-445
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-06-23
Authors: Cura, V., Troffer-Charlier, N., Marechal, N., Bonnefond, L., Cavarelli, J.
PDB entry 8pje: Human Leukocyte Antigen class II allotype DR1 presenting influenza A virus haemagglutinin (HA)306-318 PKYVKQNTLKLAT
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-06-23
Authors: MacLachlan, B.J., Wall, A., Greenshields-Watson, A.L., Hesketh, S.J., Cole, D.K., Rizkallah, P.J., Godkin, A.J.
PDB entry 8pjf: Human Leukocyte Antigen class II allotype DR1 presenting P11T->R modified influenza A virus haemagglutinin (HA)306-318 PKYVKQNTLKLAR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2023-06-23
Authors: MacLachlan, B.J., Wall, A., Greenshields-Watson, A.L., Cole, D.K., Rizkallah, P.J., Godkin, A.J.
PDB entry 8pjg: F11 TCR in complex with Human Leukocyte Antigen class II allotype DR1 presenting P11T->R modified influenza A virus haemagglutinin (HA)306-318 PKYVKQNTLKLAR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-06-23
Authors: MacLachlan, B.J., Wall, A., Greenshields-Watson, A.L., Cole, D.K., Rizkallah, P.J., Godkin, A.J.
PDB entry 8pjh: Crystal structure of human insulin desB30 precursor with an Aspartate-Glycine-Lysine C-peptide in dimer (T2) conformation
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-06-23
Authors: Schluckebier, G., Johansson, E.
PDB entry 8pji: MLLT1 in complex with compound 10a
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-06-23
Authors: Raux, B., Diaz-Saez, L., Huber, K.V.M., Fedorov, O., Owen, D.R., Londregan, A.T., Bountra, C., Edwards, A., Arrowsmith, C.
PDB entry 8pjj: Cryo-EM structure of MLE in complex with SL7UUC RNA and ADP
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.24 Å
Deposited: 2023-06-23
Authors: Jagtap, P.K.A., Hennig, J.
PDB entry 8pjk: ST171-bound serotonin 5-HT1A receptor - Gi Protein Complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-06-23
Authors: Schneider, J., Gmeiner, P., Rasmussen, T., Boettcher, B.
PDB entry 8pjl: DNA duplex forming base triplets in minor groove
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-06-23
Authors: Abdullrahman, A., Cardin, C.J., Hall, J.P.
PDB entry 8pjm: Metallo beta-lactamase VIM2 with compound AK110
Classification: ANTIBIOTIC
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2023-06-23
Authors: Lucic, A., Hinchliffe, P., Schofield, C.
PDB entry 8pjn: Catalytic module of human CTLH E3 ligase bound to multiphosphorylated UBE2H~ubiquitin
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-06-23
Authors: Chrustowicz, J., Sherpa, D., Prabu, R.J., Schulman, B.A.
PDB entry 8pjo: Cryo EM structure of the type 3D polymorph of alpha-synuclein E46K mutant at low pH.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2023-06-23
Authors: Frey, L., Qureshi, B.M., Kwiatkowski, W., Rhyner, D., Greenwald, J., Riek, R.
PDB entry 8pjp: Neisseria meningitidis PilE, SB-GATDH variant, bound to the F10 nanobody
Classification: PROTEIN FIBRIL
Source organism: Neisseria meningitidis 8013; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-06-23
Authors: Fernandez-Martinez, D., Dumenil, G.
PDB entry 8pjq: Crystal structure of the SAKe2BE protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pjr: Crystal structure of the SAKe6AC-LB protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pjs: Crystal structure of the computationally designed SAKe6CEref protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pjt: Crystal structure of the computationally designed SAKe6DEref protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pju: Crystal structure of the computationally designed SAKe6DEtal protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pjv: Crystal structure of the computationally designed SAKe6DR protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pjw: Crystal structure of the computationally designed SAKe6FE protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pjx: Crystal structure of the computationally designed SAKe6FR protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pjy: Crystal structure of the computationally designed SAKe6EEref protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pjz: Crystal structure of the computationally designed SAKe6EEtal protein
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-06-23
Authors: Wouters, S.M.L.
PDB entry 8pk0: human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2023-06-23
Authors: Kummer, E., Nguyen, T.G., Ritter, C.
PDB entry 8pk1: Cas1-Cas2 CRISPR integrase bound to prespacer DNA, Streptococcus thermophilus DGCC 7710 CRISPR3 system
Classification: DNA BINDING PROTEIN
Source organism: Streptococcus thermophilus DGCC 7710; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-06-23
Authors: Sasnauskas, G., Gaizauskaite, U., Tamulaitiene, G.
PDB entry 8pk2: Cryo EM structure of the type 1m polymorph of alpha-synuclein
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-06-24
Authors: Frey, L., Qureshi, B.M., Kwiatkowski, W., Rhyner, D., Greenwald, J., Riek, R.
PDB entry 8pk3: CryoEM reconstruction of hemagglutinin HK68 of Influenza A virus bound to an Affimer reagent
Classification: ANTIVIRAL PROTEIN
Source organism: Influenza A virus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-06-24
Authors: Debski-Antoniak, O., Flynn, A., Klebl, D.P., Tiede, C., Muench, S., Tomlinson, D., Fontana, J.
PDB entry 8pk4: Cryo EM structure of the type 5A polymorph of alpha-synuclein.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-06-24
Authors: Frey, L., Qureshi, B.M., Kwiatkowski, W., Rhyner, D., Greenwald, J., Riek, R.
PDB entry 8pk5: INTS13-INTS14 complex with ZNF609
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-06-25
Authors: Sabath, K., Jonas, S.
PDB entry 8pk6: INTS13 complex with ZNF655
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2023-06-25
Authors: Sabath, K., Jonas, S.
PDB entry 8pk7: Helical reconstruction of CHIKV nsP3 helical scaffolds
Classification: VIRAL PROTEIN
Source organism: Chikungunya virus strain S27-African prototype
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2023-06-25
Authors: Reguera, J., Hons, M., Zimberger, C., Ptchelkine, D., Jones, R., Desfosses, A.
PDB entry 8pk8: Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (persulfide on ISCU2)
Classification: TRANSFERASE
Source organism: Escherichia coli BL21(DE3); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2023-06-26
Authors: Steinhilper, R., Murphy, B.J.
PDB entry 8pk9: Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (persulfide on NFS1 and ISCU2)
Classification: TRANSFERASE
Source organism: Escherichia coli BL21(DE3); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2023-06-26
Authors: Steinhilper, R., Murphy, B.J.
PDB entry 8pka: Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (without frataxin)
Classification: TRANSFERASE
Source organism: Escherichia coli BL21(DE3); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2023-06-26
Authors: Steinhilper, R., Murphy, B.J.
PDB entry 8pkb: Staphylococcus aureus endonuclease IV with bound phosphate
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-06-26
Authors: Saper, M., Kirillov, S., Rouvinski, A.
PDB entry 8pkc: Structure of Api m1 in complex with the AM1-4 nanobody
Classification: ALLERGEN
Source organism: Apis mellifera; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 4.1 Å
Deposited: 2023-06-26
Authors: Aagaard, J.B., Gandini, R., Spillner, E., Miehe, M.
PDB entry 8pkd: Cryo-EM structure of Orrella dioscoreae BcsD
Classification: STRUCTURAL PROTEIN
Source organism: Orrella dioscoreae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2023-06-26
Authors: Puygrenier, L., Decossas, M., Krasteva, P.V.
PDB entry 8pke: ATTRV20I amyloid fibril from hereditary ATTR amloidosis
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2023-06-26
Authors: Steinebrei, M., Schmidt, M., Faendrich, M.
PDB entry 8pkf: ATTRG47E amyloid fibril from hereditary ATTR amloidosis
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3673 Å
Deposited: 2023-06-26
Authors: Steinebrei, M., Schmidt, M., Faendrich, M.
PDB entry 8pkg: ATTRV122I amyloid fibril from hereditary ATTR amloidosis
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-06-26
Authors: Steinebrei, M., Schmidt, M., Faendrich, M.
PDB entry 8pkh: Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell
Classification: VIRAL PROTEIN
Source organism: Borreliella burgdorferi B31
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2023-06-26
Authors: Rumnieks, J., Fuzik, T., Tars, K.
PDB entry 8pki: Cryo-EM structure of NR5A2-nucleosome complex SHL+5.5
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2023-06-26
Authors: Kobayashi, W., Sappler, A., Bollschweiler, D., Kummecke, M., Basquin, J., Arslantas, E., Ruangroengkulrith, S., Hornberger, R., Duderstadt, K., Tachibana, K.
PDB entry 8pkj: Cryo-EM structure of the nucleosome containing Nr5a2 motif at SHL+5.5
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-06-26
Authors: Kobayashi, W., Sappler, A., Bollschweiler, D., Kummecke, M., Basquin, J., Arslantas, E., Ruangroengkulrith, S., Hornberger, R., Duderstadt, K., Tachibana, K.
PDB entry 8pkl: Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2023-06-26
Authors: Fluegel, T., Schacherl, M.
PDB entry 8pkm: Befiradol-bound serotonin 5-HT1A receptor - Gi Protein Complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-06-27
Authors: Schneider, J., Gmeiner, P., Hove, T.T., Rasmussen, T., Boettcher, B.
PDB entry 8pkn: CryoEM structure of catalytic domain of human HMG-CoA reductase with its inhibitor atorvastatin
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.26 Å
Deposited: 2023-06-27
Authors: Manikandan, K., Van Rooyen, J.
PDB entry 8pko: The ERAD misfolded glycoprotein checkpoint complex from Chaetomium thermophilum (EDEM:PDI heterodimer).
Classification: OXIDOREDUCTASE
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-06-27
Authors: Roversi, P., Hitchman, C.J., Lia, A., Bayo, Y., Gooptu, B.
PDB entry 8pkp: Cryo-EM structure of the apo Anaphase-promoting complex/cyclosome (APC/C) at 3.2 Angstrom resolution
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-06-27
Authors: Hoefler, A., Yu, J., Chang, L., Zhang, Z., Yang, J., Boland, A., Barford, D.
PDB entry 8pkq: Crystal structure of PknD-34, a repeat fragment from the M. tuberculosis PknD beta-propeller
Classification: UNKNOWN FUNCTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-06-27
Authors: Wouters, S.M.L.
PDB entry 8pkr: Crystal structure of PknD-345, a repeat fragment from the M. tuberculosis PknD beta-propeller
Classification: UNKNOWN FUNCTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2023-06-27
Authors: Wouters, S.M.L.
PDB entry 8pks: Low resolution crystal structure of Keap1-456, a repeat fragment from the human Keap1 beta-propeller
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-06-27
Authors: Wouters, S.M.L.
PDB entry 8pku: Kelch domain of KEAP1 in complex with ortho-dimethylbenzene linked cyclic peptide 3 (ortho-WRCDEETGEC).
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2023-06-27
Authors: Braun, M.B., Bischof, L., Hartmann, M.D.
PDB entry 8pkv: Kelch domain of KEAP1 in complex with a ortho-dimethylbenzene linked cyclic peptide 4 (ortho-WRCDPETGEC).
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-06-27
Authors: Braun, M.B., Bischof, L., Hartmann, M.D.
PDB entry 8pkw: Kelch domain of KEAP1 in complex with a ortho-dimethylbenzene linked cyclic peptide 5 (ortho-WRCDPETaEC).
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-06-27
Authors: Braun, M.B., Bischof, L., Hartmann, M.D.
PDB entry 8pkx: Kelch domain of KEAP1 in complex with a ortho-dimethylbenzene linked cyclic peptide 11 (ortho-WRCNPETaEC).
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2023-06-27
Authors: Braun, M.B., Bischof, L., Hartmann, M.D.
PDB entry 8pky: Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148V variant
Classification: FLUORESCENT PROTEIN
Source organism: Chloroflexus aggregans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-06-27
Authors: Nikolaev, A., Remeeva, A., Gushchin, I.
PDB entry 8pkz: NMR solution structure of PilF-GSPIIB in the c-di-GMP bound state
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB27
Experimental method: SOLUTION NMR
Deposited: 2023-06-27
Authors: Neissner, K., Woehnert, J.
PDB entry 8pl0: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 1.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pl1: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 2.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pl2: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 3.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pl3: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 4.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pl4: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 5.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pl5: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 6.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pl6: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 7.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pl7: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 8.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pl8: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 9.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pl9: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 10.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.
PDB entry 8pla: Thioredoxin glutathione reductase of Schistosoma mansoni fragment screen hit 11.
Classification: FLAVOPROTEIN
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2023-06-27
Authors: Ribeiro, L., Montoya, B.O., Moreira-Filho, J.T., Bowyer, S., Verma, A., Neves, B.J., Owens, R.J., Andrade, C.H., Silva-Jr, F.P., Furnham, N.