LiteFold/PDB huggingface dataset:
PDB entry 1v8z: X-ray crystal structure of the Tryptophan Synthase b2 Subunit from Hyperthermophile, Pyrococcus furiosus
Classification: LYASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2004-01-15
Authors: Hioki, Y., Ogasahara, K., Lee, S.J., Ma, J., Ishida, M., Yamagata, Y., Matsuura, Y., Ota, M., Kuramitsu, S., Yutani, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v90: Solution structure by NMR means of delta-paluIT1-NH2
Classification: TOXIN
Source organism: Paracoelotes luctuosus
Experimental method: SOLUTION NMR
Deposited: 2004-01-19
Authors: Ferrat, G., Bosmans, F., Tytgat, J., Pimentel, C., Chagot, B., Nakajima, T., Darbon, H., Corzo, G.
PDB entry 1v91: Solution structure of insectidal toxin delta-paluIT2-NH2
Classification: TOXIN
Source organism: Paracoelotes luctuosus
Experimental method: SOLUTION NMR
Deposited: 2004-01-19
Authors: Ferrat, G., Bosmans, F., Tytgat, J., Pimentel, C., Chagot, B., Nakajima, T., Darbon, H., Corzo, G.
PDB entry 1v92: Solution structure of the UBA domain from p47, a major cofactor of the AAA ATPase p97
Classification: RECOMBINATION
Source organism: Rattus norvegicus
Experimental method: SOLUTION NMR
Deposited: 2004-01-19
Authors: Yuan, X., Simpson, P., Mckeown, C., Kondo, H., Uchiyama, K., Wallis, R., Dreveny, I., Keetch, C., Zhang, X., Robinson, C., Freemont, P., Matthews, S.
PDB entry 1v93: 5,10-Methylenetetrahydrofolate Reductase from Thermus thermophilus HB8
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-01-20
Authors: Nakajima, Y., Miyahara, I., Hirotsu, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v94: Crystal structure of isocitrate dehydrogenase from Aeropyrum pernix
Classification: OXIDOREDUCTASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2004-01-20
Authors: Jeong, J.-J., Sonoda, T., Fushinobu, S., Shoun, H., Wakagi, T.
PDB entry 1v95: Solution Structure of Anticodon Binding Domain from Nuclear Receptor Coactivator 5 (Human KIAA1637 Protein)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-01-20
Authors: Zhao, C., Kigawa, T., Tochio, N., Koshiba, S., Inoue, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v96: Crystal structure of hypothetical protein of unknown function from pyrococcus horikoshii OT3
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2004-01-21
Authors: Jeyakanthan, J., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v97: Crystal Structure of Bovine Milk Xanthine Dehydrogenase FYX-051 bound form
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2004-01-21
Authors: Okamoto, K., Matsumoto, K., Hille, R., Eger, B.T., Pai, E.F., Nishino, T.
PDB entry 1v98: Crystal Structure Analysis of Thioredoxin from Thermus thermophilus
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2004-01-21
Authors: Rehse, P.H., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9a: Crystal structure of Uroporphyrin-III C-methyl transferase from Thermus thermophilus complexed with S-adenyl homocysteine
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-01-23
Authors: Rehse, P.H., Kitao, T., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9c: Crystal Analysis of Precorrin-8x Methyl Mutase from Thermus Thermophilus
Classification: ISOMERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-01-23
Authors: Inagaki, E., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9d: Crystal structure of the core FH2 domain of mouse mDia1
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-01-24
Authors: Shimada, A., Nyitrai, M., Vetter, I.R., Kuhlmann, D., Bugyi, B., Narumiya, S., Geeves, M.A., Wittinghofer, A.
PDB entry 1v9e: Crystal Structure Analysis of Bovine Carbonic Anhydrase II
Classification: LYASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2004-01-26
Authors: Saito, R., Sato, T., Ikai, A., Tanaka, N.
PDB entry 1v9f: Crystal structure of catalytic domain of pseudouridine synthase RluD from Escherichia coli
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-01-26
Authors: Mizutani, K., Machida, Y., Unzai, S., Park, S.-Y., Tame, J.R.H.
PDB entry 1v9g: Neutron Crystallographic analysis of the Z-DNA hexamer CGCGCG
Classification: DNA
Experimental method: NEUTRON DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-01-26
Authors: Chatake, T., Tanaka, I., Niimura, N.
PDB entry 1v9h: Crystal structure of the RNase MC1 mutant Y101A in complex with 5'-UMP
Classification: HYDROLASE
Source organism: Momordica charantia
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-01-26
Authors: Kimura, K., Numata, T., Kakuta, Y., Kimura, M.
PDB entry 1v9i: Crystal Structure Analysis of the site specific mutant (Q253C) of bovine carbonic anhydrase II
Classification: LYASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2004-01-26
Authors: Saito, R., Sato, T., Ikai, A., Tanaka, N.
PDB entry 1v9j: Solution structure of a BolA-like protein from Mus musculus
Classification: structural genomics, unknown function
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2004-01-26
Authors: Kasai, T., Inoue, M., Koshiba, S., Yabuki, T., Aoki, M., Nunokawa, E., Seki, E., Matsuda, T., Matsuda, N., Tomo, Y., Shirouzu, M., Terada, T., Obayashi, N., Hamana, H., Shinya, N., Tatsuguchi, A., Yasuda, S., Yoshida, M., Hirota, H., Matsuo, Y., Tani, K., Suzuki, H., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9k: The crystal structure of the catalytic domain of pseudouridine synthase RluC from Escherichia coli
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-01-26
Authors: Machida, Y., Mizutani, K., Unzai, S., Park, S.-Y., Tame, J.R.H.
PDB entry 1v9l: L-glutamate dehydrogenase from Pyrobaculum islandicum complexed with NAD
Classification: OXIDOREDUCTASE
Source organism: Pyrobaculum islandicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-01-26
Authors: Bhuiya, M.W., Sakuraba, H., Ohshima, T., Imagawa, T., Katunuma, N., Tsuge, H.
PDB entry 1v9m: Crystal structure of the C subunit of V-type ATPase from Thermus thermophilus
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2004-01-26
Authors: Numoto, N., Kita, A., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9n: Structure of Malate Dehydrogenase from Pyrococcus horikoshii OT3
Classification: OXIDOREDUCTASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-01-26
Authors: Lokanath, N.K., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9o: Crystal structure of TT1020 from Thermus thermophilus HB8
Classification: SIGNALING PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-01-27
Authors: Wang, H., Sakai, H., Takemoto-Hori, C., Kaminishi, T., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9p: Crystal Structure Of Nad+-Dependent DNA Ligase
Classification: LIGASE
Source organism: Thermus filiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-01-27
Authors: Lee, J.Y., Chang, C., Song, H.K., Moon, J., Yang, J.K., Kim, H.K., Kwon, S.K., Suh, S.W.
PDB entry 1v9q: Crystal Structure of an Artificial Metalloprotein:Mn(III)(3,3'-Me2-salophen)/apo-A71G Myoglobin
Classification: OXYGEN STORAGE/TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2004-01-29
Authors: Ueno, T., Koshiyama, T., Kono, M., Kondo, K., Ohashi, M., Suzuki, A., Yamane, T., Watanabe, Y.
PDB entry 1v9s: Crystal structure of TT0130 protein from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-01-29
Authors: Lokanath, N.K., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9t: Structure of E. coli cyclophilin B K163T mutant bound to succinyl-ALA-PRO-ALA-P-nitroanilide
Classification: ISOMERASE/ISOMERASE INHIBITOR
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-02-03
Authors: Konno, M., Sano, Y., Okudaira, K., Kawaguchi, Y., Yamagishi-Ohmori, Y., Fushinobu, S., Matsuzawa, H.
PDB entry 1v9u: Human Rhinovirus 2 bound to a fragment of its cellular receptor protein
Classification: Virus/Receptor
Source organism: Homo sapiens; Human rhinovirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2004-02-03
Authors: Verdaguer, N., Fita, I., Reithmayer, M., Moser, R., Blaas, D.
PDB entry 1v9v: Solution structure of putative domain of human KIAA0561 protein
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-02-03
Authors: Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9w: Solution structure of mouse putative 42-9-9 protein
Classification: Structural genomics, unknown function
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2004-02-03
Authors: Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9x: Solution structure of the first Zn-finger domain of poly(ADP-ribose) polymerase-1
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 2004-02-04
Authors: Nagashima, T., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1v9y: Crystal Structure of the heme PAS sensor domain of Ec DOS (ferric form)
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2004-02-04
Authors: Kurokawa, H., Lee, D.S., Watanabe, M., Sagami, I., Mikami, B., Raman, C.S., Shimizu, T.
PDB entry 1v9z: Crystal Structure of the heme PAS sensor domain of Ec DOS (Ferrous Form)
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-02-04
Authors: Kurokawa, H., Lee, D.S., Watanabe, M., Sagami, I., Mikami, B., Raman, C.S., Shimizu, T.
PDB entry 1va0: Crystal Structure of the Native Form of Uroporphyrin III C-methyl transferase from Thermus thermophilus
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2004-02-05
Authors: Rehse, P.H., Kitao, T., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1va1: Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 1)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-02-07
Authors: Oka, S., Shiraishi, Y., Yoshida, T., Ohkubo, T., Sugiura, Y., Kobayashi, Y.
PDB entry 1va2: Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 2)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-02-07
Authors: Oka, S., Shiraishi, Y., Yoshida, T., Ohkubo, T., Sugiura, Y., Kobayashi, Y.
PDB entry 1va3: Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 3)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-02-07
Authors: Oka, S., Shiraishi, Y., Yoshida, T., Ohkubo, T., Sugiura, Y., Kobayashi, Y.
PDB entry 1va4: Pseudomonas fluorescens aryl esterase
Classification: HYDROLASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.804 Å
Deposited: 2004-02-11
Authors: Cheeseman, J.D., Tocilj, A., Park, S., Schrag, J.D., Kazlauskas, R.J.
PDB entry 1va5: Antigen 85C with octylthioglucoside in active site
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2004-02-11
Authors: Ronning, D.R., Vissa, V., Besra, G.S., Belisle, J.T., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 1va6: Crystal structure of Gamma-glutamylcysteine synthetase from Escherichia Coli B complexed with Transition-state analogue
Classification: LIGASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-02-12
Authors: Hibi, T., Nii, H., Nakatsu, T., Kato, H., Hiratake, J., Oda, J.
PDB entry 1va7: Yeast Myo3 SH3 domain, triclinic crystal form
Classification: CONTRACTILE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-02-12
Authors: Kursula, P., Lehmann, F., Song, Y.H., Wilmanns, M.
PDB entry 1va8: Solution structure of the PDZ domain of Pals1 protein
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2004-02-13
Authors: Qin, X.-R., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1va9: Solution structure of the second FNIII domain of DSCAML1 protein
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-02-13
Authors: Qin, X.-R., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vac: MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND CHICKEN OVALBUMIN
Classification: COMPLEX (MHC I/PEPTIDE)
Source organism: Gallus gallus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1994-11-01
Authors: Fremont, D.H., Wilson, I.A.
PDB entry 1vad: MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND YEAST ALPHA-GLUCOSIDASE
Classification: COMPLEX (MHC I/PEPTIDE)
Source organism: Mus musculus; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1994-11-01
Authors: Fremont, D.H., Wilson, I.A.
PDB entry 1vae: Solution structure of the PDZ domain of mouse Rhophilin-2
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2004-02-14
Authors: Yoneyama, M., Tochio, N., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vaf: Inducible nitric oxide synthase oxygenase domain complexed with the inhibitor AR-R17477
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-02-16
Authors: Fedorov, R., Vasan, R., Ghosh, D.K., Schlichting, I.
PDB entry 1vag: Neuronal nitric oxide synthase oxygenase domain complexed with the inhibitor AR-R17477
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-02-16
Authors: Fedorov, R., Vasan, R., Ghosh, D.K., Schlichting, I.
PDB entry 1vah: Crystal structure of the pig pancreatic-amylase complexed with r-nitrophenyl-a-D-maltoside
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-02-17
Authors: Zhuo, H., Payan, F., Qian, M.
PDB entry 1vai: Structure of e. coli cyclophilin B K163T mutant bound to n-acetyl-ala-ala-pro-ala-7-amino-4-methylcoumarin
Classification: ISOMERASE
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-02-17
Authors: Konno, M., Sano, Y., Okudaira, K., Kawaguchi, Y., Yamagishi-Ohmori, Y., Fushinobu, S., Matsuzawa, H.
PDB entry 1vaj: Crystal Structure of Uncharacterized Protein PH0010 From Pyrococcus horikoshii
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2004-02-17
Authors: Tajika, Y., Sakai, N., Tamura, T., Yao, M., Watanabe, N., Tanaka, I.
PDB entry 1vak: T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65
Classification: VIRUS
Source organism: Sesbania mosaic virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2004-02-18
Authors: Sangita, V., Lokesh, G.L., Satheshkumer, P.S., Vijay, C.S., Saravanan, V., Savithri, H.S., Murthy, M.R.
PDB entry 1val: CONCANAVALIN A COMPLEX WITH 4'-NITROPHENYL-ALPHA-D-GLUCOPYRANOSIDE
Classification: LECTIN
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 1996-01-08
Authors: Kanellopoulos, P.N., Tucker, P.A., Hamodrakas, S.J.
PDB entry 1vam: CONCANAVALIN A COMPLEX WITH 4'-NITROPHENYL-ALPHA-D-MANNOPYRANOSIDE
Classification: LECTIN
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 1996-01-08
Authors: Kanellopoulos, P.N., Tucker, P.A., Hamodrakas, S.J.
PDB entry 1vao: STRUCTURE OF THE OCTAMERIC FLAVOENZYME VANILLYL-ALCOHOL OXIDASE
Classification: FLAVOENZYME
Source organism: Penicillium simplicissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1997-04-10
Authors: Mattevi, A.
PDB entry 1vap: THE MONOMERIC ASP49 SECRETORY PHOSPHOLIPASE A2 FROM THE VENOM OF AGKISTRIDON PISCIVORUS PISCIVORUS
Classification: LIPID DEGRADATION
Source organism: Agkistrodon piscivorus piscivorus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 1996-11-15
Authors: Scott, D.L.
PDB entry 1vaq: Crystal structure of the Mg2+-(chromomycin A3)2-d(TTGGCCAA)2 complex reveals GGCC binding specificity of the drug dimer chelated by metal ion
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-02-19
Authors: Hou, M.H., Robinson, H., Gao, Y.G., Wang, A.H.-J.
PDB entry 1var: MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE VARIANT WITH ILE 58 REPLACED BY THR
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1996-01-04
Authors: Borgstahl, G.E.O., Parge, H.E., Tainer, J.A.
PDB entry 1vas: ATOMIC MODEL OF A PYRIMIDINE DIMER SPECIFIC EXCISION REPAIR ENZYME COMPLEXED WITH A DNA SUBSTRATE: STRUCTURAL BASIS FOR DAMAGED DNA RECOGNITION
Classification: HYDROLASE/DNA
Source organism: Enterobacteria phage T4; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 1995-09-08
Authors: Vassylyev, D.G., Kashiwagi, T., Mikami, Y., Ariyoshi, M., Iwai, S., Ohtsuka, E., Morikawa, K.
PDB entry 1vat: Iodine derivative of hen egg-white lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-02-19
Authors: Takeda, K., Miyatake, H., Park, S.Y., Kawamoto, M., Kamiya, N., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vau: Xenon derivative of hen egg-white lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2004-02-19
Authors: Takeda, K., Miyatake, H., Park, S.Y., Kawamoto, M., Kamiya, N., Miki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vav: Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution
Classification: LYASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-02-19
Authors: Yamasaki, M., Moriwaki, S., Miyake, O., Hashimoto, W., Murata, K., Mikami, B.
PDB entry 1vax: Crystal Structure of Uricase from Arthrobacter globiformis
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2004-02-19
Authors: Hossain, M.T., Suzuki, K., Yamamoto, T., Imamura, S., Sekiguchi, T., Takenaka, A.
PDB entry 1vay: Crystal Structure of Uricase from Arthrobacter globiformis with inhibitor 8-azaxanthine
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2004-02-19
Authors: Hossain, M.T., Suzuki, K., Yamamoto, T., Imamura, S., Sekiguchi, T., Takenaka, A.
PDB entry 1vaz: Solution structures of the p47 SEP domain
Classification: LIPID BINDING PROTEIN
Source organism: Rattus norvegicus
Experimental method: SOLUTION NMR
Deposited: 2004-02-20
Authors: Yuan, X., Simpson, P., Mckeown, C., Kondo, H., Uchiyama, K., Wallis, R., Dreveny, I., Keetch, C., Zhang, X., Robinson, C., Freemont, P., Matthews, S.
PDB entry 1vb0: Atomic resolution structure of atratoxin-b, one short-chain neurotoxin from Naja atra
Classification: TOXIN
Source organism: Naja atra
Experimental method: X-RAY DIFFRACTION
Resolution: 0.92 Å
Deposited: 2004-02-20
Authors: Lou, X., Liu, Q., Teng, M., Niu, L., Huang, Q., Hao, Q.
PDB entry 1vb2: T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N
Classification: VIRUS
Source organism: Sesbania mosaic virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2004-02-21
Authors: Sangita, V., Lokesh, G.L., Satheshkumar, P.S., Vijay, C.S., Saravanan, V., Savithri, H.S., Murthy, M.R.
PDB entry 1vb3: Crystal Structure of Threonine Synthase from Escherichia coli
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-02-21
Authors: Omi, R.
PDB entry 1vb4: T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)36
Classification: VIRUS
Source organism: Sesbania mosaic virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2004-02-21
Authors: Sangita, V., Lokesh, G.L., Satheshkumar, P.S., Vijay, C.S., Saravanan, V., Savithri, H.S., Murthy, M.R.
PDB entry 1vb5: Crystal Structure Analysis of the Pyrococcus horikoshii OT3 translation initiation factor eIF-2B
Classification: TRANSLATION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-02-22
Authors: Kakuta, Y., Tahara, M., Maetani, S., Kimura, M.
PDB entry 1vb6: Crystal Structure of the heme PAS sensor domain of Ec DOS (oxygen-bound form)
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2004-02-24
Authors: Kurokawa, H., Watanabe, M., Sagami, I., Mikami, B., Shimizu, T.
PDB entry 1vb7: Solution structure of the PDZ domain of PDZ and LIM domain 2
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2004-02-24
Authors: Hatta, R., Hayashi, F., Yoshida, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vb8: solution structure of vhr1, the first cyclotide from root tissue
Classification: PLANT PROTEIN
Source organism: Viola hederacea
Experimental method: SOLUTION NMR
Deposited: 2004-02-25
Authors: Trabi, M., Craik, D.J.
PDB entry 1vb9: Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) complexed with transglycosylated product
Classification: HYDROLASE
Source organism: Thermoactinomyces vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-02-25
Authors: Mizuno, M., Tonozuka, T., Uechi, A., Ohtaki, A., Ichikawa, K., Kamitori, S., Nishikawa, A., Sakano, Y.
PDB entry 1vba: POLIOVIRUS (TYPE 3, SABIN STRAIN) (P3/SABIN, P3/LEON/12A(1)B) COMPLEXED WITH R78206
Classification: VIRUS
Source organism: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 1996-01-02
Authors: Grant, R.A., Hiremath, C.N., Filman, D.J., Syed, R., Andries, K., Hogle, J.M.
PDB entry 1vbb: POLIOVIRUS (TYPE 3, SABIN STRAIN) (P3/SABIN, P3/LEON/12A(1)B) COMPLEXED WITH R80633
Classification: VIRUS
Source organism: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 1996-01-02
Authors: Grant, R.A., Hiremath, C.N., Filman, D.J., Syed, R., Andries, K., Hogle, J.M.
PDB entry 1vbc: POLIOVIRUS (TYPE 3, SABIN STRAIN) (P3/SABIN, P3/LEON/12A(1)B) COMPLEXED WITH R77975
Classification: VIRUS
Source organism: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 1996-01-02
Authors: Grant, R.A., Hiremath, C.N., Filman, D.J., Syed, R., Andries, K., Hogle, J.M.
PDB entry 1vbd: POLIOVIRUS (TYPE 1, MAHONEY STRAIN) COMPLEXED WITH R78206
Classification: VIRUS
Source organism: Human poliovirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 1996-01-02
Authors: Grant, R.A., Hiremath, C.N., Filman, D.J., Syed, R., Andries, K., Hogle, J.M.
PDB entry 1vbe: POLIOVIRUS (TYPE 3, SABIN STRAIN, MUTANT 242-H2) COMPLEXED WITH R78206
Classification: VIRUS
Source organism: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 1996-01-02
Authors: Grant, R.A., Hiremath, C.N., Filman, D.J., Syed, R., Andries, K., Hogle, J.M.
PDB entry 1vbf: Crystal structure of protein L-isoaspartate O-methyltransferase homologue from Sulfolobus tokodaii
Classification: TRANSFERASE
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-02-25
Authors: Tanaka, Y., Tsumoto, K., Yasutake, Y., Umetsu, M., Yao, M., Tanaka, I., Fukada, H., Kumagai, I.
PDB entry 1vbg: Pyruvate Phosphate Dikinase from Maize
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-02-26
Authors: Nakanishi, T., Nakatsu, T., Matsuoka, M., Sakata, K., Kato, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vbh: Pyruvate Phosphate Dikinase with bound Mg-PEP from Maize
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-02-26
Authors: Nakanishi, T., Nakatsu, T., Matsuoka, M., Sakata, K., Kato, H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vbi: Crystal structure of type 2 malate/lactate dehydrogenase from thermus thermophilus HB8
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-02-27
Authors: Mizutani, H., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vbj: The crystal structure of prostaglandin F synthase from Trypanosoma brucei
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-02-27
Authors: Inoue, T.
PDB entry 1vbk: Crystal structure of PH1313 from Pyrococcus horikoshii Ot3
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-02-27
Authors: Sugahara, M., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vbl: Structure of the thermostable pectate lyase PL 47
Classification: LYASE
Source organism: Bacillus sp. TS-47
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2004-02-27
Authors: Nakaniwa, T., Tada, T., Yamaguchi, A., Kitatani, T., Takao, M., Sakai, T., Nishimura, K.
PDB entry 1vbm: Crystal structure of the Escherichia coli tyrosyl-tRNA synthetase complexed with Tyr-AMS
Classification: LIGASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2004-02-27
Authors: Kobayashi, T., Sakamoto, K., Takimura, T., Kamata, K., Sekine, R., Nishimura, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vbn: Escherichia coli tyrosyl-tRNA synthetase mutant complexed with Tyr-AMS
Classification: LIGASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2004-02-27
Authors: Kobayashi, T., Sakamoto, K., Takimura, T., Kamata, K., Sekine, R., Nishimura, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vbo: Crystal structure of artocarpin-mannotriose complex
Classification: PLANT PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2004-02-28
Authors: Jeyaprakash, A.A., Srivastav, A., Surolia, A., Vijayan, M.
PDB entry 1vbp: Crystal structure of artocarpin-mannopentose complex
Classification: PLANT PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2004-02-28
Authors: Jeyaprakash, A.A., Srivastav, A., Surolia, A., Vijayan, M.
PDB entry 1vbr: Crystal structure of complex xylanase 10B from Thermotoga maritima with xylobiose
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-03-02
Authors: Ihsanawati, Kumasaka, T., Kaneko, T., Nakamura, S., Tanaka, N.
PDB entry 1vbs: STRUCTURE OF CYCLOPHILIN COMPLEXED WITH (D)ALA CONTAINING TETRAPEPTIDE
Classification: ISOMERASE/ ISOMERASE SUBSTRATE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 1998-06-16
Authors: Zhao, Y., Chen, Y., Schutkowski, M., Fischer, G., Ke, H.
PDB entry 1vbt: Structure of cyclophilin complexed with sulfur-substituted tetrapeptide AAPF
Classification: ISOMERASE/ISOMERASE SUBSTRATE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1998-06-16
Authors: Zhao, Y., Chen, Y., Schutkowski, M., Fischer, G., Ke, H.
PDB entry 1vbu: Crystal structure of native xylanase 10B from Thermotoga maritima
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-03-02
Authors: Ihsanawati, Kumasaka, T., Kaneko, T., Nakamura, S., Tanaka, N.
PDB entry 1vbw: Crystal Structure of Bitter Gourd Trypsin Inhibitor
Classification: PROTEIN BINDING
Source organism: Momordica charantia
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2004-03-03
Authors: Suto, K., Furuichi, M., Nishimoto, E., Meno, K., Horii, K., Mizuno, H.
PDB entry 1vbx: Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in EDTA solution
Classification: TRANSLATION/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2004-03-03
Authors: Ke, A., Zhou, K., Ding, F., Cate, J.H.D., Doudna, J.A.
PDB entry 1vby: Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, and Mn2+ bound
Classification: TRANSLATION/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-03-03
Authors: Ke, A., Zhou, K., Ding, F., Cate, J.H.D., Doudna, J.A.
PDB entry 1vbz: Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Ba2+ solution
Classification: TRANSLATION/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-03-03
Authors: Ke, A., Zhou, K., Ding, F., Cate, J.H.D., Doudna, J.A.
PDB entry 1vc0: Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Imidazole and Sr2+ solution
Classification: TRANSLATION/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-03-03
Authors: Ke, A., Zhou, K., Ding, F., Cate, J.H.D., Doudna, J.A.
PDB entry 1vc1: Crystal structure of the TM1442 protein from Thermotoga maritima, a homolog of the Bacillus subtilis general stress response anti-anti-sigma factor RsbV
Classification: GENE REGULATION
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-03-03
Authors: Lee, J.Y., Ahn, H.J., Ha, K.S., Suh, S.W.
PDB entry 1vc2: Crystal structure of Glyceraldehyde 3-Phosphate Dehydrogenase from Thermus thermophilus HB8
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-03-04
Authors: Ishijima, J., Yutani, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vc3: Crystal Structure of L-Aspartate-alpha-Decarboxylase
Classification: LYASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2004-03-04
Authors: Nakajima, O., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vc4: Crystal Structure of Indole-3-Glycerol Phosphate Synthase (TrpC) from Thermus Thermophilus At 1.8 A Resolution
Classification: LYASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-03-04
Authors: Bagautdinov, B., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vc5: Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solution
Classification: TRANSLATION/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2004-03-04
Authors: Ke, A., Zhou, K., Ding, F., Cate, J.H.D., Doudna, J.A.
PDB entry 1vc6: Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Product with C75U Mutaion, cleaved in Imidazole and Mg2+ solutions
Classification: TRANSLATION/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-03-04
Authors: Ke, A., Zhou, K., Ding, F., Cate, J.H.D., Doudna, J.A.
PDB entry 1vc8: Crystal Structure of a T.thermophilus HB8 Ap6A Hydrolase Ndx1-Ap6A Complex
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-03-05
Authors: Iwai, T., Nakagawa, N., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vc9: Crystal Structure of a T.thermophilus HB8 Ap6A hydrolase E50Q mutant-Mg2+-ATP complex
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-03-05
Authors: Iwai, T., Nakagawa, N., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vca: CRYSTAL STRUCTURE OF AN INTEGRIN-BINDING FRAGMENT OF VASCULAR CELL ADHESION MOLECULE-1 AT 1.8 ANGSTROMS RESOLUTION
Classification: CELL ADHESION PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1995-03-21
Authors: Jones, E.Y., Harlos, K., Bottomley, M.J., Robinson, R.C., Driscoll, P.C., Edwards, R.M., Clements, J.M., Dudgeon, T.J., Stuart, D.I.
PDB entry 1vcb: THE VHL-ELONGINC-ELONGINB STRUCTURE
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 1999-03-13
Authors: Stebbins, C.E., Kaelin, W.G., Pavletich, N.P.
PDB entry 1vcc: AMINO TERMINAL 9KDA DOMAIN OF VACCINIA VIRUS DNA TOPOISOMERASE I RESIDUES 1-77, EXPERIMENTAL ELECTRON DENSITY FOR RESIDUES 1-77
Classification: DNA BINDING
Source organism: Vaccinia virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 1995-10-02
Authors: Sharma, A., Hanai, R., Mondragon, A.
PDB entry 1vcd: Crystal Structure of a T.thermophilus HB8 Ap6A hydrolase Ndx1
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-03-05
Authors: Iwai, T., Nakagawa, N., Kuramitsu, S., Masui, R., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vce: Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-03-07
Authors: Kunishima, N., Shimizu, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vcf: Crystal Structure of IPP isomerase at I422
Classification: ISOMERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-03-08
Authors: Wada, T., Park, S.-Y., Tame, R.H., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vcg: Crystal Structure of IPP isomerase at P43212
Classification: ISOMERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2004-03-08
Authors: Wada, T., Park, S.-Y., Tame, R.H., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vch: Crystal Structure of a Phosphoribosyltransferase-related protein from Thermus thermophilus
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2004-03-08
Authors: Rehse, P.H., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vci: Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3 complexed with ATP
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-03-08
Authors: Ose, T., Fujie, T., Yao, M., Watanabe, N., Tanaka, I.
PDB entry 1vcj: Influenza B virus neuraminidase complexed with 1-(4-Carboxy-2-(3-pentylamino)phenyl)-5-aminomethyl-5-hydroxymethyl-pyrrolidin-2-one
Classification: HYDROLASE
Source organism: Influenza B virus (B/Lee/40)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-03-09
Authors: Lommer, B.S., Ali, S.M., Bajpai, S.N., Brouillette, W.J., Air, G.M., Luo, M.
PDB entry 1vck: Crystal structure of ferredoxin component of carbazole 1,9a-dioxygenase of Pseudomonas resinovorans strain CA10
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas resinovorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-03-09
Authors: Nam, J.-W., Noguchi, H., Fujiomoto, Z., Mizuno, H., Fushinobu, S., Kobashi, N., Iwata, K., Yoshida, T., Habe, H., Yamane, H., Omori, T., Nojiri, H.
PDB entry 1vcl: Crystal Structure of Hemolytic Lectin CEL-III
Classification: TOXIN
Source organism: Cucumaria echinata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-03-09
Authors: Uchida, T., Yamasaki, T., Eto, S., Sugawara, H., Kurisu, G., Nakagawa, A., Kusunoki, M., Hatakeyama, T.
PDB entry 1vcm: Crystal Structure of T.th. HB8 CTP synthetase
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2004-03-10
Authors: Goto, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vcn: Crystal Structure of T.th. HB8 CTP synthetase complex with Sulfate anion
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2004-03-10
Authors: Goto, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vco: Crystal Structure of T.th. HB8 CTP synthetase complex with Glutamine
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2004-03-10
Authors: Goto, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vcp: SEMLIKI FOREST VIRUS CAPSID PROTEIN (CRYSTAL FORM I)
Classification: VIRAL PROTEIN
Source organism: Semliki forest virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 1996-03-04
Authors: Lu, G., Choi, H.-K., Rossmann, M.G.
PDB entry 1vcq: SEMLIKI FOREST VIRUS CAPSID PROTEIN (CRYSTAL FORM II)
Classification: VIRAL PROTEIN
Source organism: Semliki forest virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 1996-03-04
Authors: Lu, G., Choi, H.-K., Rossmann, M.G.
PDB entry 1vcr: An icosahedral assembly of light-harvesting chlorophyll a/b protein complex from pea thylakoid membranes
Classification: PHOTOSYNTHESIS
Source organism: Pisum sativum
Experimental method: X-RAY DIFFRACTION
Resolution: 9.5 Å
Deposited: 2004-03-10
Authors: Hino, T., Kanamori, E., Shen, J.-R., Kouyama, T.
PDB entry 1vcs: Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2004-03-10
Authors: Abe, T., Hirota, H., Tomizawa, T., Koshiba, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vct: Crystal structure of putative potassium channel related protein from Pyrococcus horikoshii
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2004-03-12
Authors: Inagaki, E., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vcu: Structure of the human cytosolic sialidase Neu2 in complex with the inhibitor DANA
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2004-03-12
Authors: Chavas, L.M.G., Fusi, P., Tringali, C., Venerando, B., Tettamanti, G., Kato, R., Monti, E., Wakatsuki, S.
PDB entry 1vcv: Structure of 2-deoxyribose-5-phosphate aldolase from Pyrobaculum aerophilum
Classification: LYASE
Source organism: Pyrobaculum aerophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-03-15
Authors: Sakuraba, H., Ohshima, T., Tsuge, H.
PDB entry 1vcw: Crystal structure of DegS after backsoaking the activating peptide
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2004-03-16
Authors: Wilken, C., Kitzing, K., Kurzbauer, R., Ehrmann, M., Clausen, T.
PDB entry 1vcx: Neutron Crystal Structure of the Wild Type Rubredoxin from Pyrococcus Furiosus at 1.5A Resolution
Classification: ELECTRON TRANSPORT
Source organism: Pyrococcus furiosus
Experimental method: NEUTRON DIFFRACTION
Resolution: 1.5 Å
Deposited: 2004-03-17
Authors: Kurihara, K., Tanaka, I., Chatake, T., Adams, M.W.W., Jenney Jr., F.E., Moiseeva, N., Bau, R., Niimura, N.
PDB entry 1vcy: VVA2 isoform
Classification: TOXIN
Source organism: Volvariella volvacea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-03-17
Authors: Lin, S.-C., Lo, Y.-C., Lin, J.-Y., Liaw, Y.-C.
PDB entry 1vcz: Crystal structure of the RNase NT in complex with 5'-GMP
Classification: HYDROLASE
Source organism: Nicotiana glutinosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-03-17
Authors: Kawano, S., Kakuta, Y., Kimura, M.
PDB entry 1vd0: Capsid stabilizing protein GPD, NMR, 20 Structures
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage lambda
Experimental method: SOLUTION NMR
Deposited: 2004-03-17
Authors: Iwai, H., Forrer, P., Pluckthun, A., Guntert, P., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vd1: Crystal structure of RNase NT in complex with 5'-AMP
Classification: HYDROLASE
Source organism: Nicotiana glutinosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-03-17
Authors: Kawano, S., Kakuta, Y., Kimura, M.
PDB entry 1vd2: Solution Structure of the PB1 domain of PKCiota
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-03-18
Authors: Hirano, Y., Yoshinaga, S., Yokochi, M., Ogura, K., Noda, Y., Sumimoto, H., Inagaki, F.
PDB entry 1vd3: Ribonuclease NT in complex with 2'-UMP
Classification: HYDROLASE
Source organism: Nicotiana glutinosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-03-18
Authors: Kawano, S., Kakuta, Y., Kimura, M.
PDB entry 1vd4: Solution structure of the zinc finger domain of TFIIE alpha
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-03-18
Authors: Okuda, M., Tanaka, A., Arai, Y., Satoh, M., Okamura, H., Nagadoi, A., Hanaoka, F., Ohkuma, Y., Nishimura, Y.
PDB entry 1vd5: Crystal Structure of Unsaturated Glucuronyl Hydrolase, Responsible for the Degradation of Glycosaminoglycan, from Bacillus sp. GL1 at 1.8 A Resolution
Classification: HYDROLASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-03-18
Authors: Itoh, T., Akao, S., Hashimoto, W., Mikami, B., Murata, K.
PDB entry 1vd6: Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2004-03-18
Authors: Ishijima, J., Yutani, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 1vd7: Solution structure of FMBP-1 tandem repeat 1
Classification: TRANSCRIPTION
Experimental method: SOLUTION NMR
Deposited: 2004-03-20
Authors: Kawaguchi, K., Yamaki, T., Aizawa, T., Takiya, S., Demura, M., Nitta, K.
PDB entry 1vd8: Solution structure of FMBP-1 tandem repeat 2
Classification: TRANSCRIPTION
Experimental method: SOLUTION NMR
Deposited: 2004-03-20
Authors: Yamaki, T., Kawaguchi, K., Aizawa, T., Takiya, S., Demura, M., Nitta, K.
PDB entry 1vd9: Solution structure of FMBP-1 tandem repeat 3
Classification: TRANSCRIPTION
Experimental method: SOLUTION NMR
Deposited: 2004-03-20
Authors: Kawaguchi, K., Yamaki, T., Aizawa, T., Takiya, S., Demura, M., Nitta, K.
PDB entry 1vda: Solution structure of FMBP-1 tandem repeat 4
Classification: TRANSCRIPTION
Experimental method: SOLUTION NMR
Deposited: 2004-03-20
Authors: Kawaguchi, K., Yamaki, T., Aizawa, T., Takiya, S., Demura, M., Nitta, K.
PDB entry 1vdb: NMR structure of FMBP-1 tandem repeat 1 in 30%(v/v) TFE solution
Classification: TRANSCRIPTION
Experimental method: SOLUTION NMR
Deposited: 2004-03-20
Authors: Kawaguchi, K., Yamaki, T., Aizawa, T., Takiya, S., Demura, M., Nitta, K.
PDB entry 1vdc: STRUCTURE OF NADPH DEPENDENT THIOREDOXIN REDUCTASE
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1996-09-22
Authors: Dai, S., Eklund, H.
PDB entry 1vdd: Crystal structure of recombinational repair protein RecR
Classification: RECOMBINATION
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-03-20
Authors: Lee, B.I., Kim, K.H., Suh, S.W.
PDB entry 1vde: PI-SCEI, A HOMING ENDONUCLEASE WITH PROTEIN SPLICING ACTIVITY
Classification: ENDONUCLEASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 1997-04-01
Authors: Duan, X., Quiocho, F.A.
PDB entry 1vdf: ASSEMBLY DOMAIN OF CARTILAGE OLIGOMERIC MATRIX PROTEIN
Classification: EXTRACELLULAR MATRIX PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 1996-09-12
Authors: Malashkevich, V.N.
PDB entry 1vdg: Crystal structure of LIR1.01, one of the alleles of LIR1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-03-22
Authors: Shiroishi, M., Rasubala, L., Kuroki, K., Amano, K., Tsuchiya, N., Tokunaga, K., Kohda, D., Maenaka, K.