LiteFold/PDB huggingface dataset:
PDB entry 8bq6: Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation 2 composition)
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-18
Authors: Klusch, N., Kuehlbrandt, W.
PDB entry 8bq7: Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH2829
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-11-19
Authors: Scaletti, E., Stenmark, P.
PDB entry 8bq8: Crystal structure of Trichoplax Dlg PDZ2 domain in complex with Trichoplax Vangl peptide
Classification: PROTEIN BINDING
Source organism: Trichoplax sp. H2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-20
Authors: Madduamge, J.C., Kvansakul, M.
PDB entry 8bqa: CjCel5B endo-glucanase bound to CB665 covalent inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2022-11-20
Authors: McGregor, N.G.S., de Boer, C., Overkleeft, H.S., Davies, G.J.
PDB entry 8bqb: CjCel5C endo-glucanase bound to CB396 covalent inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus Ueda107
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2022-11-20
Authors: McGregor, N.G.S., de Boer, C., Overkleeft, H.S., Davies, G.J.
PDB entry 8bqc: CjCel5B endo-glucanase
Classification: HYDROLASE
Source organism: Cellvibrio japonicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-11-20
Authors: McGregor, N.G.S., Davies, G.J.
PDB entry 8bqd: Yeast 80S ribosome in complex with Map1 (conformation 1)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-11-21
Authors: Knorr, A.G., Mackens-Kiani, T., Musial, J., Berninghausen, O., Becker, T., Beatrix, B., Beckmann, R.
PDB entry 8bqe: In situ structure of the Caulobacter crescentus S-layer
Classification: STRUCTURAL PROTEIN
Source organism: Caulobacter vibrioides NA1000
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-11-21
Authors: von Kuegelgen, A., Bharat, T.
PDB entry 8bqf: Adenylate Kinase L107I MUTANT
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-11-21
Authors: Scheerer, D., Adkar, B.V., Bhattacharyya, S., Levy, D., Iljina, M., Iljina, I., Dym, O., Haran, G., Shakhnovich, E.I.
PDB entry 8bqg: W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1 min
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.946 Å
Deposited: 2022-11-21
Authors: Vilela-Alves, G., Mota, C., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8bqh: W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1.5 min
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2022-11-21
Authors: Vilela-Alves, G., Mota, C., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8bqi: W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 3 min
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 2.356 Å
Deposited: 2022-11-21
Authors: Vilela-Alves, G., Mota, C., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8bqj: W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 5 min
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 2.107 Å
Deposited: 2022-11-21
Authors: Vilela-Alves, G., Mota, C., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8bqk: W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 22 min
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.587 Å
Deposited: 2022-11-21
Authors: Vilela-Alves, G., Mota, C., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8bql: W-formate dehydrogenase from Desulfovibrio vulgaris - Co-crystallized with Formate and Reoxidized by exposure to air for 12 min
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.906 Å
Deposited: 2022-11-21
Authors: Vilela-Alves, G., Mota, C., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8bqm: X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(D-p-FPhF)(O2CCH3)3] (Structure 4)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2022-11-21
Authors: Teran, A., Merlino, A., Ferraro, G.
PDB entry 8bqn: Structure of empty Coxsackievirus A10 embedded in crystalline ice frozen at -140 degree
Classification: VIRUS
Source organism: Coxsackievirus A10
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-11-21
Authors: Shi, H., Wu, C., Zhang, X.
PDB entry 8bqo: Structure of E.coli Class 2 L-asparaginase EcAIII, mutant M200I
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-21
Authors: Sciuk, A., Ruszkowski, M., Jaskolski, M., Loch, J.I.
PDB entry 8bqp: Hen Egg-White Lysozyme (HEWL) complexed with methyl-functionalised Anderson-Evans polyoxometalate
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2022-11-21
Authors: Lentink, S., Salazar Marcano, D.E., Moussawi, M.A., Vandebroek, L., Van Meervelt, L., Parac-Vogt, T.N.
PDB entry 8bqq: Hen Egg-White Lysozyme (HEWL) complexed with amine-functionalised Anderson-Evans polyoxometalate
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-11-21
Authors: Lentink, S., Salazar Marcano, D.E., Moussawi, M.A., Vandebroek, L., Van Meervelt, L., Parac-Vogt, T.N.
PDB entry 8bqr: Hen Egg-White Lysozyme (HEWL) complexed with biotin-functionalised Anderson-Evans polyoxometalate
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-11-21
Authors: Lentink, S., Salazar Marcano, D.E., Moussawi, M.A., Vandebroek, L., Van Meervelt, L., Parac-Vogt, T.N.
PDB entry 8bqs: Cryo-EM structure of the I-II-III2-IV2 respiratory supercomplex from Tetrahymena thermophila
Classification: ELECTRON TRANSPORT
Source organism: Tetrahymena thermophila SB210
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-21
Authors: Muhleip, A., Kock Flygaard, R., Baradaran, R., Amunts, A.
PDB entry 8bqt: Hen Egg-White Lysozyme (HEWL) complexed with two methyl-functionalised Anderson-Evans polyoxometalates
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2022-11-21
Authors: Lentink, S., Salazar Marcano, D.E., Moussawi, M.A., Vandebroek, L., Van Meervelt, L., Parac-Vogt, T.N.
PDB entry 8bqu: Molecular basis of ZP3/ZP1 heteropolymerization: crystal structure of a native vertebrate egg coat filament
Classification: STRUCTURAL PROTEIN
Source organism: Oryzias latipes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-21
Authors: Bokhove, M., de Sanctis, D., Yasumasu, S., Jovine, L.
PDB entry 8bqv: Cryo-EM structure of alpha-synuclein singlet filament from Juvenile-onset synucleinopathy
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2023-01-18
Authors: Yang, Y., Garringer, J.H., Shi, Y., Lovestam, S., Peak-Chew, S.Y., Zhang, X.J., Kotecha, A., Bacioglu, M., Koto, A., Takao, M., Spillantini, G.M., Ghetti, B., Vidal, R., Murzin, G.A., Scheres, H.W.S., Goedert, M.
PDB entry 8bqw: Cryo-EM structure of alpha-synuclein filaments doublet from Juvenile-onset synucleinopathy
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-01-18
Authors: Yang, Y., Garringer, J.H., Shi, Y., Lovestam, S., Peak-Chew, S.Y., Zhang, X.J., Kotecha, A., Bacioglu, M., Koto, A., Takao, M., Spillantini, G.M., Ghetti, B., Vidal, R., Murzin, G.A., Scheres, H.W.S., Goedert, M.
PDB entry 8bqx: Yeast 80S ribosome in complex with Map1 (conformation 2)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-11-21
Authors: Knorr, A.G., Mackens-Kiani, T., Musial, J., Berninghausen, O., Becker, T., Beatrix, B., Beckmann, R.
PDB entry 8bqy: An i-motif domain able to undergo pH-dependent conformational transitions (acidic structure)
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2022-11-22
Authors: Serrano-Chacon, I., Mir, B., Cupellini, L., Colizzi, F., Orozco, M., Escaja, N., Gonzalez, C.
PDB entry 8br0: ExoY Nucleotidyl Cyclase domain from Vibrio nigripulchritudo MARTX toxin (residue Q3455 to L3863) in complex with 3'deoxyCTP and two manganese cations bound to Latrunculin-B-ADP-Mn-actin
Classification: TOXIN
Source organism: Oryctolagus cuniculus; Vibrio nigripulchritudo SFn135
Experimental method: X-RAY DIFFRACTION
Resolution: 2.218 Å
Deposited: 2022-11-22
Authors: Texeira-Nuns, M., Retailleau, P., Renault, L.
PDB entry 8br1: ExoY Nucleotidyl Cyclase domain from Vibrio nigripulchritudo MARTX toxin, bound to Latrunculin-B-ATP-Mg-actin, and 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE and 2 Mg ions
Classification: TOXIN
Source organism: Oryctolagus cuniculus; Vibrio nigripulchritudo
Experimental method: X-RAY DIFFRACTION
Resolution: 2.044 Å
Deposited: 2022-11-22
Authors: Teixeira-Nunes, M., Renault, L., Retailleau, P.
PDB entry 8br2: CryoEM structure of the post-synaptic RAD51 nucleoprotein filament in the presence of ATP and Ca2+
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-22
Authors: Appleby, R., Bollschweiler, D., Pellegrini, L.
PDB entry 8br4: Structure of GAPDH from Mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2022-11-22
Authors: Kumar, A., Karthikeyan, S.
PDB entry 8br5: Discovery of IRAK4 Inhibitor 41
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-22
Authors: Schafer, M., Bothe, U., Schmidt, N., Gunther, J., Nubbemeyer, R., Siebeneicher, H., Ring, S., Boemer, U., Peters, M., Denner, K., Himmel, H., Sutter, A., Terebesi, I., Lange, M., Wenger, A.M., Guimond, N., Thaler, T., Platzek, J., Eberspaecher, U., Steuber, H., Steinmeyer, A., Zollner, T.M.
PDB entry 8br6: Discovery of IRAK4 Inhibitor 40
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.167 Å
Deposited: 2022-11-22
Authors: Schafer, M., Bothe, U., Schmidt, N., Gunther, J., Nubbemeyer, R., Siebeneicher, H., Ring, S., Boemer, U., Peters, M., Denner, K., Himmel, H., Sutter, A., Terebesi, I., Lange, M., Wengner, A.M., Guimond, N., Thaler, T., Platzek, J., Ewerspaecher, U., Steuber, H., Steinmeyer, A., Zollner, T.M.
PDB entry 8br7: Discovery of IRAK4 Inhibitors BAY1834845 and BAY1830839
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.119 Å
Deposited: 2022-11-22
Authors: Schafer, M., Bothe, U., Schmidt, N., Gunther, J., Nubbemeyer, R., Siebeneicher, H., Ring, S., Boemer, U., Peters, M., Denner, K., Himmel, H., Sutter, A., Terebesi, I., Lange, M., Wenger, A.M., Guimond, N., Thaler, T., Platzek, J., Eberspaecher, U., Steuber, H., Steinmeyer, A., Zollner, T.M.
PDB entry 8br8: Giardia ribosome in POST-T state (A1)
Classification: RIBOSOME
Source organism: Giardia lamblia ATCC 50803
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2022-11-22
Authors: Majumdar, S., Emmerich, A.G., Sanyal, S.
PDB entry 8br9: Stapled peptide SP24 in complex with humanised RadA mutant HumRadA22
Classification: RECOMBINATION
Source organism: Homo sapiens; Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-11-22
Authors: Pantelejevs, T., Hyvonen, M.
PDB entry 8bra: Polyester Hydrolase Leipzig 7 (PHL7) bound to terephthalic acid (TPA) and Mg2+
Classification: HYDROLASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-22
Authors: Richter, P.K., Strater, N.
PDB entry 8brb: Polyester Hydrolase Leipzig 7 (PHL7) bound to terephthalic acid (TPA)
Classification: HYDROLASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-22
Authors: Richter, P.K., Strater, N.
PDB entry 8brc: Crystal structure of the adduct between human serum transferrin and cisplatin
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.17 Å
Deposited: 2022-11-22
Authors: Troisi, R., Galardo, F., Ferraro, G., Sica, F., Merlino, A.
PDB entry 8brd: Mechanisms of ion selectivity and rotor coupling in the bacterial flagellar sodium-driven stator unit
Classification: MOTOR PROTEIN
Source organism: Vibrio alginolyticus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2022-11-23
Authors: Hu, H., Taylor, N.M.I.
PDB entry 8bre: 1,6-anhydro-n-actetylmuramic acid kinase (AnmK)
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-23
Authors: Jimenez-Faraco, E., Hermoso, J.A.
PDB entry 8brf: YopQ apo from Yersinia enterocolitica
Classification: TOXIN
Source organism: Yersinia enterocolitica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2022-11-23
Authors: Sung, S., Blaha, J., Wilmanns, M.
PDB entry 8brg: Crystal structure of She4
Classification: CHAPERONE
Source organism: Kluyveromyces lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-23
Authors: Gudino, R., Arnese, R., Meinhart, A., Clausen, T.
PDB entry 8brh: Co-crystal structure of She4 with Myo4 peptide
Classification: CHAPERONE
Source organism: Kluyveromyces lactis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-23
Authors: Arnese, R., Gudino, R., Meinhart, A., Clausen, T.
PDB entry 8bri: VaPomAB MSP1D1 nanodisc
Classification: MOTOR PROTEIN
Source organism: Vibrio alginolyticus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-11-23
Authors: Hu, H., Taylor, N.M.I.
PDB entry 8brj: Escherichia coli anaerobic fatty acid beta oxidation trifunctional enzyme (anEcTFE) trimeric complex
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.08 Å
Deposited: 2022-11-23
Authors: Sah-Teli, S.K., Pinkas, M., Novacek, J., Venkatesan, R.
PDB entry 8brk: Room temperature crystal structure of cytochrome c' from Thermus thermophilus
Classification: ELECTRON TRANSPORT
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-11-23
Authors: Fujii, S., Hough, M.A.
PDB entry 8brl: Room temperature crystal structure of cytochrome c' from Hydrogenophilus thermoluteolus
Classification: ELECTRON TRANSPORT
Source organism: Hydrogenophilus thermoluteolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-11-23
Authors: Fujii, S., Hough, M.A.
PDB entry 8brm: Giardia ribosome in POST-T state, no E-site tRNA (A6)
Classification: RIBOSOME
Source organism: Giardia lamblia ATCC 50803
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2022-11-23
Authors: Majumdar, S., Emmerich, A.G., Sanyal, S.
PDB entry 8brn: Crystal structure of red kidney bean purple acid phosphatase in complex with an alpha-aminonaphthylmethylphosphonic acid inhibitor
Classification: METAL BINDING PROTEIN
Source organism: Phaseolus vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-23
Authors: Feder, D., Hussein, W.M., Guddat, L.W., Schenk, G.
PDB entry 8bro: Structure of the N-terminal domain of BC2L-C lectin (1-131) in complex with a synthetic beta-fucosylamide
Classification: SUGAR BINDING PROTEIN
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-11-23
Authors: Varrot, A., Lunstrom, J.
PDB entry 8brp: Peptide Arginase OspR from the cyanobacterium Kamptonema sp.
Classification: HYDROLASE
Source organism: Kamptonema
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-11-23
Authors: Mordhorst, S., Badmann, T., Boesch, N.M., Morinaka, B.I., Rach, H., Piel, J., Groll, M., Vagstadt, A.L.
PDB entry 8brq: Crystal structure of a surface entropy reduction variant of penicillin G acylase from Bacillaceae i. s. sp. FJAT-27231
Classification: HYDROLASE
Source organism: Bacillus sp. FJAT-27231
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-11-23
Authors: Wichmann, J., Mayer, J., Mattes, H., Lukat, P., Blankenfeldt, W., Biedendieck, R.
PDB entry 8brr: Crystal structure of a variant of penicillin G acylase from Bacillaceae i. s. sp. FJAT-27231 with reduced surface entropy and additionally engineered crystal contact
Classification: HYDROLASE
Source organism: Bacillus sp. FJAT-27231
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-11-23
Authors: Wichmann, J., Mayer, J., Mattes, H., Lukat, P., Blankenfeldt, W., Biedendieck, R.
PDB entry 8brs: Crystal structure of a variant of penicillin G acylase from Bacillaceae i. s. sp. FJAT-27231 with reduced surface entropy and additionally engineered crystal contact.
Classification: HYDROLASE
Source organism: Bacillus sp. FJAT-27231
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-11-23
Authors: Wichmann, J., Mayer, J., Mattes, H., Lukat, P., Blankenfeldt, W., Biedendieck, R.
PDB entry 8brt: Crystal structure of a variant of penicillin G acylase from Bacillaceae i. s. sp. FJAT-27231 with reduced surface entropy and additionally engineered crystal contact
Classification: HYDROLASE
Source organism: Bacillus sp. FJAT-27231
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2022-11-23
Authors: Wichmann, J., Mayer, J., Mattes, H., Lukat, P., Blankenfeldt, W., Biedendieck, R.
PDB entry 8bru: Escherichia coli methionyl-tRNA synthetase mutant L13M,I297C
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-11-24
Authors: Schmitt, E., Mechulam, Y., Nigro, G., Opuu, V., Lazennec-Schurdevin, C., Simonson, T.
PDB entry 8brv: Escherichia coli methionyl-tRNA synthetase mutant L13M,I297C complexed with beta3-methionine.
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2022-11-24
Authors: Schmitt, E., Mechulam, Y., Nigro, G., Opuu, V., Lazennec-Schurdevin, C., Simonson, T.
PDB entry 8brw: Escherichia coli methionyl-tRNA synthetase mutant L13C,I297C
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-11-24
Authors: Schmitt, E., Mechulam, Y., Nigro, G., Opuu, V., Lazennec-Schurdevin, C., Simonson, T.
PDB entry 8brx: Escherichia coli methionyl-tRNA synthetase mutant L13C,I297C complexed with beta-3-methionine
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-11-24
Authors: Schmitt, E., Mechulam, Y., Nigro, G., Opuu, V., Lazennec-Schurdevin, C., Simonson, T.
PDB entry 8bry: Room-temperature structure of Pedobacter heparinus N-acetylglucosamine 2-epimerase at atmospheric pressure
Classification: ISOMERASE
Source organism: Pedobacter heparinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-11-24
Authors: Lieske, J., Saouane, S., Assmann, M., Zaun, H., Kuballa, J., Meents, A.
PDB entry 8brz: Room-temperature structure of Pedobacter heparinus N-acetylglucosamine 2-epimerase at 52 MPa helium gas pressure in a sapphire capillary
Classification: ISOMERASE
Source organism: Pedobacter heparinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-24
Authors: Lieske, J., Saouane, S., Assmann, M., Zaun, H., Kuballa, J., Meents, A.
PDB entry 8bs0: Room-temperature structure of Pedobacter heparinus N-acetylglucosamine 2-epimerase at 80 MPa helium gas pressure in a sapphire capillary
Classification: ISOMERASE
Source organism: Pedobacter heparinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-24
Authors: Lieske, J., Saouane, S., Assmann, M., Zaun, H., Kuballa, J., Meents, A.
PDB entry 8bs1: Room-temperature structure of SARS-CoV-2 Main protease at atmospheric pressure
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-11-24
Authors: Lieske, J., Saouane, S., Guenther, S., Reinke, P.Y.A., Rahmani Mashhour, A., Meents, A.
PDB entry 8bs2: Room-temperature structure of SARS-CoV-2 Main protease at 104 MPa helium gas pressure in a sapphire capillary
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-11-24
Authors: Lieske, J., Saouane, S., Guenther, S., Reinke, P.Y.A., Rahmani Mashhour, A., Meents, A.
PDB entry 8bs3: Structure of USP36 in complex with Fubi-PA
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-11-24
Authors: O'Dea, R., Gersch, M.
PDB entry 8bs4: Crystal structure of YTHDF1 YTH domain dimer
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-24
Authors: Bedi, R.K., Caflisch, A.
PDB entry 8bs5: Crystal structure of YTHDF3 YTH domain open conformation
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2022-11-24
Authors: Bedi, R.K., Caflisch, A.
PDB entry 8bs6: Crystal structure of YTHDF3 disulfide mutant (closed conformation)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-11-24
Authors: Bedi, R.K., Li, Y., Caflisch, A.
PDB entry 8bs7: Multimerisation domain of Borna disease virus 1
Classification: VIRAL PROTEIN
Source organism: Borna disease virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2022-11-24
Authors: Whitehead, J.D., Grimes, J.M., Keown, J.R.
PDB entry 8bs8: Bovine naive ultralong antibody AbD08 collected at 100K
Classification: IMMUNE SYSTEM
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2022-11-24
Authors: Clarke, J.D., Douangamath, A., Mikolajek, H., Stuart, D.I., Owens, R.J.
PDB entry 8bs9: Structure of USP36 in complex with Ubiquitin-PA
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-11-24
Authors: O'Dea, R., Gersch, M.
PDB entry 8bsa: Vc1313-LBD bound to D-arginine
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-11-24
Authors: ter Beek, J., Berntsson, R.P.-A.
PDB entry 8bsb: Vc1313-LBD bound to D-lysine
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-11-24
Authors: ter Beek, J., Berntsson, R.P.-A.
PDB entry 8bsc: CryoEM structure of the RAD51 nucleoprotein filament in the presence of ADP and Ca2+
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-11-24
Authors: Appleby, R., Bollschweiler, D., Pellegrini, L.
PDB entry 8bsd: SARS-CoV-2 nsp10-16 methyltransferase in complex with tubercidin
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-11-24
Authors: Kremling, V., Oberthuer, D., Sprenger, J.
PDB entry 8bse: CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN (RBD) in complex with 1D1 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-11-25
Authors: Welin, M., Kimbung, Y.R., Focht, D., Pisitkun, T.
PDB entry 8bsf: CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN (RBD-beta variant) in complex with 3D2 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-11-25
Authors: Welin, M., Kimbung, Y.R., Focht, D., Pisitkun, T.
PDB entry 8bsg: COMPLEX OF LEPORINE SERUM ALBUMIN WITH DICLOFENAC
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-11-25
Authors: Bujacz, A., Talaj, J., Zielinski, K.
PDB entry 8bsh: COPII inner coat
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-11-25
Authors: Zanetti, G., Pyle, E.W.
PDB entry 8bsi: Giardia ribosome chimeric hybrid-like GDP+Pi bound state (B1)
Classification: RIBOSOME
Source organism: Giardia intestinalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-11-25
Authors: Majumdar, S., Emmerich, A.G., Sanyal, S.
PDB entry 8bsj: Giardia Ribosome in PRE-T Classical State (C)
Classification: RIBOSOME
Source organism: Giardia intestinalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.49 Å
Deposited: 2022-11-25
Authors: Majumdar, S., Emmerich, A.G., Sanyal, S.
PDB entry 8bsk: Human GLS in complex with compound 3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-25
Authors: Debreczeni, J.E.
PDB entry 8bsl: Human GLS in complex with compound 12
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-11-25
Authors: Debreczeni, J.E.
PDB entry 8bsm: Human GLS in complex with compound 18
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.782 Å
Deposited: 2022-11-25
Authors: Debreczeni, J.E.
PDB entry 8bsn: Human GLS in complex with compound 27
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.494 Å
Deposited: 2022-11-25
Authors: Debreczeni, J.E.
PDB entry 8bso: crystal structure of antibody Fab with SiaLac-amidine-Lys
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2022-11-25
Authors: Moynie, L., Naismith, J.H.
PDB entry 8bsp: Notum Inhibitor ARUK3006560
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-11-26
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bsq: Notum Inhibitor ARUK3006561
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-11-26
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bsr: Notum Inhibitor ARUK3006562
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-11-26
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bss: Solution Structure of thanatin-like derivative 5 in complex with E. coli LptA mutant Q62L
Classification: ANTIBIOTIC
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2022-11-26
Authors: Oi, K.K., Jurt, S., Moehle, K., Zerbe, O.
PDB entry 8bst: Crystal structure of the kainate receptor GluK3-H523A ligand binding domain in complex with kainate at 2.7A resolution
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-26
Authors: Venskutonyte, R., Frydenvang, K., Kastrup, J.S.
PDB entry 8bsu: Crystal structure of the kainate receptor GluK3-H523A ligand binding domain in complex with kainate and the positive allosteric modulator BPAM344 at 2.9A resolution
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-11-26
Authors: Venskutonyte, R., Frydenvang, K., Kastrup, J.S.
PDB entry 8bsv: IPNS H270D variant in complex with Fe and ACV under anaerobic conditions
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2022-11-29
Authors: Rabe, P., Schofield, C.J.
PDB entry 8bsw: IPNS H270Q variant in complex with Fe and ACV under anaerobic conditions
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-11-29
Authors: Rabe, P., Schofield, C.J.
PDB entry 8bsx: IPNS H270D variant in complex with Fe and ACV after 10 min O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2022-11-26
Authors: Rabe, P., Schofield, C.J.
PDB entry 8bsy: IPNS H270D variant in complex with Fe and ACV after 30s O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-26
Authors: Rabe, P., Schofield, C.J.
PDB entry 8bsz: Notum Inhibitor ARUK3005522
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-27
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bt0: Notum Inhibitor ARUK3005518
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-11-27
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bt1: YdaT transcription regulator (CII functional analog)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39788 Å
Deposited: 2022-11-27
Authors: Prolic-Kalinsek, M., Loris, R.
PDB entry 8bt2: Notum Inhibitor ARUK3004876
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-27
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bt3: Ribonucleotide Reductase class Ie R2 from Mesoplasma florum, catalytically active radical state solved by XFEL
Classification: OXIDOREDUCTASE
Source organism: Mesoplasma florum L1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-11-27
Authors: Lebrette, H., Srinivas, V., Hogbom, M.
PDB entry 8bt4: Ribonucleotide Reductase class Ie R2 from Mesoplasma florum, radical-lost ground state
Classification: OXIDOREDUCTASE
Source organism: Mesoplasma florum L1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-11-27
Authors: Lebrette, H., Srinivas, V., Hogbom, M.
PDB entry 8bt5: Notum Inhibitor ARUK3004877
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-27
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bt6: Crystal structure of Toxoplasma gondii glideosome-associated connector
Classification: PROTEIN BINDING
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2022-11-27
Authors: Hung, Y.F., Kursula, I.
PDB entry 8bt7: Notum Inhibitor ARUK3004903
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-28
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bt8: Notum Inhibitor ARUK3004048
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2022-11-28
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bt9: Crystal structure of SlpA domain II (aa 201-310), domain that is involved in the self-assembly and dimerization of the S-layer from Lactobacillus acidophilus
Classification: STRUCTURAL PROTEIN
Source organism: Lactobacillus acidophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-28
Authors: Sagmeister, T., Grininger, C., Pavkov-Keller, T.
PDB entry 8bta: Notum Inhibitor ARUK3004308
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2022-11-28
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8btb: Hexameric human IgG3 Fc complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 14 Å
Deposited: 2022-11-28
Authors: Abendstein, L., Sharp, T.H.
PDB entry 8btc: Notum Inhibitor ARUK3004558
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-11-28
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8btd: Giardia Ribosome in PRE-T Hybrid State (D1)
Classification: RIBOSOME
Source organism: Giardia lamblia ATCC 50803
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2022-11-28
Authors: Majumdar, S., Emmerich, A.G., Sanyal, S.
PDB entry 8bte: Notum Inhibitor ARUK3004470
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2022-11-28
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8btg: Cryo-EM structure of the bacterial replication origin opening basal unwinding system
Classification: REPLICATION
Source organism: Bacillus subtilis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-28
Authors: Pelliciari, S., Bodet-Lefevre, S., Murray, H., Ilangovan, A.
PDB entry 8bth: Notum Inhibitor ARUK3004552
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-11-28
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8bti: Notum Inhibitor ARUK3004556
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2022-11-28
Authors: Zhao, Y., Jones, E.Y., Fish, P.
PDB entry 8btj: Murine cytomegalovirus protein M35
Classification: STRUCTURAL PROTEIN
Source organism: Muromegalovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-11-29
Authors: Schmelz, S., Van den Heuvel, J., Blankenfeldt, W.
PDB entry 8btk: Structure of the TRAP complex with the Sec translocon and a translating ribosome
Classification: TRANSLOCASE
Source organism: Canis lupus familiaris; Oryctolagus cuniculus; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-11-29
Authors: Jaskolowski, M., Jomaa, A., Gamerdinger, M., Shrestha, S., Leibundgut, M., Deuerling, E., Ban, N.
PDB entry 8btl: Crystal structure of a complex between the E2 conjugating enzyme UBE2A and the E3 ligase module from UBR4
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2022-11-29
Authors: Virdee, S., Mabbitt, P.D., Barnsby-Greer, L.
PDB entry 8btm: Structural and functional studies of geldanamycin amide synthase ShGdmF
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-29
Authors: Ewert, W., Zeilinger, C., Kirschning, A., Preller, M.
PDB entry 8btn: Crystal structure of BcThsB
Classification: HYDROLASE
Source organism: Bacillus cereus MSX-D12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-11-29
Authors: Tamulaitiene, G., Sabonis, D.
PDB entry 8bto: Helical structure of BcThsA in complex with 1''-3'gcADPR
Classification: HYDROLASE
Source organism: Bacillus cereus MSX-D12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2022-11-29
Authors: Tamulaitiene, G., Sasnauskas, G., Sabonis, D.
PDB entry 8btp: Helical structure of BcThsA in complex with 1''-3'gc(etheno)ADPR
Classification: HYDROLASE
Source organism: Bacillus cereus MSX-D12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2022-11-29
Authors: Tamulaitiene, G., Sasnauskas, G., Sabonis, D.
PDB entry 8btq: Small molecule stabilizer for 14-3-3/ChREBP (Cmd1-soaking)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-11-29
Authors: Pennings, M.A.M., Visser, E.J., Ottmann, C.
PDB entry 8btr: Giardia Ribosome in PRE-T Hybrid State (D2)
Classification: RIBOSOME
Source organism: Giardia lamblia ATCC 50803
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-11-29
Authors: Majumdar, S., Emmerich, A.G., Sanyal, S.
PDB entry 8bts: Nitrogenase MoFe protein from A. vinelandii alpha double mutant C45A/L158C
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii DJ
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2022-11-29
Authors: Wagner, T., Maslac, N.
PDB entry 8btt: Structure of human RTCB
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-11-30
Authors: Kopp, J., Gerber, J.L., Peschek, J.
PDB entry 8btu: Structure of D179N BlaC from Mycobacterium tuberculosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-11-30
Authors: Chikunova, A., Bruenle, S., Ubbink, M.
PDB entry 8btv: Structure of D179N BlaC from Mycobacterium tuberculosis bound to the trans-enamine adduct of sulbactam
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-12-02
Authors: Chikunova, A., Bruenle, S., Ubbink, M.
PDB entry 8btw: Structure of D179N BlaC from Mycobacterium tuberculosis in complex with vaborbactam
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-12-02
Authors: Chikunova, A., Bruenle, S., Ubbink, M.
PDB entry 8btx: Structure of human Archease
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2022-11-30
Authors: Kopp, J., Gerber, J.L., Peschek, J.
PDB entry 8bty: Structure of the active form of ScpB, the C5a-peptidase from Streptococcus agalactiae.
Classification: HYDROLASE
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-30
Authors: Kagawa, T.F., Cooney, J.C., Miclot, T., Cullen, R.
PDB entry 8btz: Single-stranded Paranemic Crossover RNA Triangle (PXT)
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.39 Å
Deposited: 2022-11-30
Authors: Sampedro, N., McRae, E.K.S., Andersen, E.S.
PDB entry 8bu0: Crystal structure of an 8 repeat consensus TPR superhelix with calcium
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-11-30
Authors: Liutkus, M., Rojas, A.L., Cortajarena, A.L.
PDB entry 8bu1: Structure of DDB1 bound to DS17-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bu2: Structure of DDB1 bound to DS18-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.13 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bu3: Structure of DDB1 bound to DS19-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bu4: Structure of DDB1 bound to DS22-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8bu5: Structure of DDB1 bound to SR-4835-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.134 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bu6: Structure of DDB1 bound to DS55-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8bu7: Structure of DDB1 bound to 21195-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.245 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bu8: Double-motif Single-stranded Paranemic Crossover RNA Triangle (2PXT)
Classification: RNA
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.56 Å
Deposited: 2022-11-30
Authors: Sampedro, N., Andersen, E.S., McRae, E.K.S.
PDB entry 8bu9: Structure of DDB1 bound to roscovitine-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.51 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8bua: Structure of DDB1 bound to 919278-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.193 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bub: Structure of DDB1 bound to dCeMM4-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8buc: Structure of DDB1 bound to dCeMM3-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.85 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8bud: Structure of DDB1 bound to Z7-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bue: Structure of DDB1 bound to Z11-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8buf: Structure of DDB1 bound to Z12-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bug: Structure of DDB1 bound to HQ461-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.53 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8buh: Structure of DDB1 bound to WX3-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.79 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8bui: Structure of DDB1 bound to DRF-053-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8buj: Structure of DDB1 bound to DS06-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.62 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8buk: Structure of DDB1 bound to DS08-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bul: Structure of DDB1 bound to DS11-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bum: Structure of DDB1 bound to DS15-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.36 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bun: Structure of DDB1 bound to DS16-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8buo: Structure of DDB1 bound to DS24-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.58 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8bup: Structure of DDB1 bound to DS30-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Petzold, G., Thoma, N.H.
PDB entry 8buq: Structure of DDB1 bound to DS43-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8bur: Structure of DDB1 bound to DS50-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.64 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8bus: Structure of DDB1 bound to DS59-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.26 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8but: Structure of DDB1 bound to DS61-engaged CDK12-cyclin K
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2022-11-30
Authors: Kozicka, Z., Kempf, G., Focht, V., Thoma, N.H.
PDB entry 8buu: ARE-ABCF VmlR2 bound to a 70S ribosome
Classification: RIBOSOME
Source organism: Bacillus subtilis subsp. subtilis str. 168; Neobacillus vireti
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-11-30
Authors: Crowe-McAuliffe, C., Wilson, D.N.
PDB entry 8buv: HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor LEDGIN 3
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2022-11-30
Authors: Singer, M.R., Pye, V.E., Cook, N.J., Cherepanov, P.