LiteFold/PDB huggingface dataset:
PDB entry 7z84: Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 8, Open-ready state
Classification: PROTON TRANSPORT
Source organism: Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2022-03-16
Authors: Kravchuk, V., Kampjut, D., Sazanov, L.
PDB entry 7z85: CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-B5 nanobody complex
Classification: ANTIVIRAL PROTEIN
Source organism: Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-16
Authors: Weckener, M., Naismith, J.H.
PDB entry 7z86: CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 1Up2Down conformation
Classification: ANTIVIRAL PROTEIN
Source organism: Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-03-16
Authors: Weckener, M., Naismith, J.H.
PDB entry 7z87: DNA-PK in the active state
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2022-03-16
Authors: Liang, S., Blundell, T.L.
PDB entry 7z88: DNA-PK in the intermediate state
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2022-03-16
Authors: Liang, S., Blundell, T.L.
PDB entry 7z89: Sam68
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2022-03-16
Authors: Nadal, M., Fuentes-Prior, P.
PDB entry 7z8a: Sam68
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2022-03-16
Authors: Nadal, M., Fuentes-Prior, P.
PDB entry 7z8b: Structure of CRL7FBXW8 reveals coupling with CUL1-RBX1/ROC1 for multi-cullin-RING E3-catalyzed ubiquitin ligation
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-03-17
Authors: Hopf, L.V.M., Schulman, B.A.
PDB entry 7z8d: Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV by fixed-target serial synchrotron crystallography (room temperature, 26keV)
Classification: PHOTOSYNTHESIS
Source organism: Cereibacter sphaeroides 2.4.1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-03-17
Authors: Gabdulkhakov, A.G., Selikhanov, G.K., Guenther, S., Petrova, T., Meents, A., Fufina, T.Y., Vasilieva, L.G.
PDB entry 7z8e: Crystal structure of the substrate-binding protein YejA from S. meliloti in complex with peptide fragment
Classification: TRANSPORT PROTEIN
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-03-17
Authors: Morera, S., Vigouroux, V., Travin, D.Y.
PDB entry 7z8f: Composite structure of dynein-dynactin-BICDR on microtubules
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 20 Å
Deposited: 2022-03-17
Authors: Chaaban, S., Carter, A.P.
PDB entry 7z8g: Cytoplasmic dynein-1 motor domain
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2022-03-17
Authors: Chaaban, S., Carter, A.P.
PDB entry 7z8h: Cytoplasmic dynein-1 motor domain AAA1, AAA2, and AAA3 subunits
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2022-03-17
Authors: Chaaban, S., Carter, A.P.
PDB entry 7z8i: The barbed end complex of dynactin bound to BICDR1 and the cytoplasmic dynein tails (A2, B1, B2)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-03-17
Authors: Chaaban, S., Carter, A.P.
PDB entry 7z8j: Cytoplasmic dynein (A2) bound to BICDR1
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2022-03-17
Authors: Chaaban, S., Carter, A.P.
PDB entry 7z8k: Cytoplasmic dynein (A1) bound to BICDR1
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.37 Å
Deposited: 2022-03-17
Authors: Chaaban, S., Carter, A.P.
PDB entry 7z8l: Cytoplasmic dynein light intermediate chain (B1) bound to the motor domain (A2).
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2022-03-17
Authors: Chaaban, S., Carter, A.P.
PDB entry 7z8m: The pointed end complex of dynactin bound to BICDR1
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2022-03-17
Authors: Chaaban, S., Carter, A.P.
PDB entry 7z8n: GacS histidine kinase from Pseudomonas aeruginosa
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2022-03-17
Authors: Fadel, F., Bassim, V., Francis, V.I., Porter, S.L., Botzanowski, T., Legrand, P., Bourne, Y., Cianferani, S., Vincent, F.
PDB entry 7z8o: Crystal structure of SARS-CoV-2 S RBD in complex with a stapled peptide
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2022-03-18
Authors: Brear, P., Chen, L., Gaynor, K., Harman, M., Dods, R., Hyvonen, M.
PDB entry 7z8p: Crystal structure of YTHDF2 with compound ZA_166
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-03-18
Authors: Nai, F., Zalesak, F., Li, Y., Caflisch, A.
PDB entry 7z8q: Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase core
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.08 Å
Deposited: 2022-03-18
Authors: Brodolin, K.
PDB entry 7z8r: CAND1-CUL1-RBX1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-03-18
Authors: Baek, K., Schulman, B.A.
PDB entry 7z8s: Mot1:TBP:DNA - post hydrolysis state
Classification: TRANSCRIPTION
Source organism: Chaetomium thermophilum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-03-18
Authors: Woike, S., Eustermann, S., Jung, J., Wenzl, S.J., Hagemann, G., Bartho, J.D., Lammens, K., Butryn, A., Herzog, F., Hopfner, K.-P.
PDB entry 7z8t: CAND1-SCF-SKP2 CAND1 engaged SCF rocked
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-03-18
Authors: Baek, K., Schulman, B.A.
PDB entry 7z8u: Catalytic subunit HisG R56A mutant from Psychrobacter arcticus ATPPRT (HisGZ) in complex with ATP and PRPP
Classification: TRANSFERASE
Source organism: Psychrobacter arcticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-18
Authors: Alphey, M.S., Fisher, G., da Silva, R.G.
PDB entry 7z8v: CAND1-SCF-SKP2 (SKP1deldel) CAND1 engaged SCF rocked
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-03-18
Authors: Baek, K., Schulman, B.A.
PDB entry 7z8w: Crystal structure of YTHDF2 with compound YLI_DC1_018
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-18
Authors: Nai, F., Li, Y., Caflisch, A.
PDB entry 7z8x: Crystal structure of YTHDF2 with compound YLI_DC1_017
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-03-18
Authors: Nachawati, R., Nai, F., Li, Y., Caflisch, A.
PDB entry 7z8y: Crystal structure of the SUN1-KASH6 9:6 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-03-19
Authors: Gurusaran, M., Davies, O.R.
PDB entry 7z8z: Crystal structure of the MEILB2-BRME1 2:2 core complex
Classification: RECOMBINATION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-03-19
Authors: Gurusaran, M., Davies, O.R.
PDB entry 7z90: Leishmania RNA virus 1 virion
Classification: VIRUS
Source organism: Leishmania RNA virus 1 - 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2022-03-19
Authors: Prochazkova, M., Plevka, P.
PDB entry 7z92: Crystal structure of YTHDF2 with compound YLI_DF_024
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2022-03-19
Authors: Nai, F., Li, Y., Caflisch, A.
PDB entry 7z93: Crystal structure of YTHDF2 with compound YLI_DF_022
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-03-19
Authors: Nai, F., Li, Y., Caflisch, A.
PDB entry 7z94: Crystal structure of Variovorax paradoxus indole monooxygenase (VpIndA1) in complex with indole
Classification: OXIDOREDUCTASE
Source organism: Variovorax paradoxus EPS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2022-03-19
Authors: Kratky, J., Weisse, R., Strater, N.
PDB entry 7z97: Crystal structure of the F191M variant of Variovorax paradoxus indole monooxygenase (VpIndA1) in complex with 6-bromoindole
Classification: OXIDOREDUCTASE
Source organism: Variovorax paradoxus EPS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2022-03-20
Authors: Kratky, J., Weisse, R., Strater, N.
PDB entry 7z98: Crystal structure of F191M variant Variovorax paradoxus indole monooxygenase (VpIndA1) in complex with methyl phenyl sulfide
Classification: OXIDOREDUCTASE
Source organism: Variovorax paradoxus EPS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-03-20
Authors: Kratky, J., Weisse, R., Strater, N.
PDB entry 7z99: Crystal structure of F191M variant of Variovorax paradoxus indole monooxygenase (VpIndA1) in complex with methyl phenyl sulfoxide
Classification: OXIDOREDUCTASE
Source organism: Variovorax paradoxus EPS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2022-03-20
Authors: Kratky, J., Weisse, R., Strater, N.
PDB entry 7z9a: Sam68
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2022-03-20
Authors: Nadal, M., Fuentes-Prior, P.
PDB entry 7z9b: Sam68
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.333 Å
Deposited: 2022-03-20
Authors: Nadal, M., Fuentes-Prior, P.
PDB entry 7z9c: E.coli gyrase holocomplex with 217 bp DNA and albicidin
Classification: ISOMERASE
Source organism: Escherichia coli str. K-12 substr. MG1655; Escherichia phage Mu
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2022-03-21
Authors: Ghilarov, D., Heddle, J.G.H., Suessmuth, R.
PDB entry 7z9d: Deinococcus radiodurans BphP PAS-GAF H260A mutant
Classification: TRANSFERASE
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-03-21
Authors: Takala, H.
PDB entry 7z9e: Deinococcus radiodurans BphP PAS-GAF H260A/Y263F mutant
Classification: TRANSFERASE
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2022-03-21
Authors: Takala, H.
PDB entry 7z9f: Human anionic trypsin after autoproteolysis at Arg122
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-03-21
Authors: Nagel, F., Palm, G.J., Delcea, M., Lammers, M.
PDB entry 7z9g: E.coli gyrase holocomplex with 217 bp DNA and Albi-2
Classification: ISOMERASE
Source organism: Escherichia coli str. K-12 substr. MG1655; Escherichia phage Mu
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-03-21
Authors: Ghilarov, D., Heddle, J.G.H.
PDB entry 7z9h: ATAD2 in complex with PepLite-Asp
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2022-03-21
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7z9i: ATAD2 in complex with PepLite-Ala
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-03-21
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7z9j: ATAD2 in complex with PepLite-Gly
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-21
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7z9k: E.coli gyrase holocomplex with 217 bp DNA and Albi-1 (site TG)
Classification: ISOMERASE
Source organism: Escherichia coli str. K-12 substr. MG1655; Escherichia phage Mu
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-03-21
Authors: Ghilarov, D., Heddle, J.G.H.
PDB entry 7z9l: Phen-DC3 intercalation causes hybrid-to-antiparallel transformation of human telomeric DNA G-quadruplex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2022-03-21
Authors: Ghosh, A., Trajkovski, M., Teulade-Fichou, M.P., Gabelica, V., Plavec, J.
PDB entry 7z9m: E.coli gyrase holocomplex with 217 bp DNA and Albi-1 (site AA)
Classification: ISOMERASE
Source organism: Escherichia coli str. K-12 substr. MG1655; Escherichia phage Mu
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-03-21
Authors: Ghilarov, D., Heddle, J.G.H.
PDB entry 7z9n: ATAD2 in complex with PepLite-Val
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2022-03-21
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7z9o: ATAD2 in complex with PepLite-Tyr
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2022-03-21
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7z9p: The novel DNA binding mechanism of ridinilazole, a precision Clostridiodes difficile antibiotic
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-03-21
Authors: Mason, S., Leonard, P.M.
PDB entry 7z9q: CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-A10 nanobody complex
Classification: ANTIVIRAL PROTEIN
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-03-21
Authors: Weckener, M., Naismith, J.H.
PDB entry 7z9r: CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 2Up1Down conformation
Classification: ANTIVIRAL PROTEIN
Source organism: Escherichia virus T4; Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-03-21
Authors: Weckener, M., Naismith, J.H.
PDB entry 7z9s: ATAD2 in complex with PepLite-Arg
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-03-21
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7z9t: Crystal structure of p38alpha C162S in complex with ATPgS and CAS 2094667-81-7 (in catalytic site, Y35 out), P 1 21 1
Classification: ONCOPROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-03-21
Authors: Baginski, B., Pous, J., Gonzalez, L., Macias, M.J., Nebreda, A.R.
PDB entry 7z9u: ATAD2 in complex with Acetyl-Lys
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2022-03-21
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7z9v: Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with 1,4-Anhydroerythritol
Classification: TRANSFERASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-21
Authors: Duclovel, C., Gelin, M., Krimm, I., Cerdan, R., Guichou, J.-F.
PDB entry 7z9w: BRD4 in complex with FragLite1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.988 Å
Deposited: 2022-03-21
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7z9y: BRD4 in complex with FragLite2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2022-03-21
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7z9z: Mutant L39Y of recombinant bovine beta-lactoglobulin in complex with pramocaine
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-21
Authors: Loch, J.I., Kurpiewska, K., Bonarek, P.
PDB entry 7za0: Mutant L58F of recombinant bovine beta-lactoglobulin in complex with pramocaine
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-21
Authors: Loch, J.I., Kurpiewska, K., Bonarek, P.
PDB entry 7za1: GPC3-Unc5D octamer structure and role in cell migration
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.1 Å
Deposited: 2022-03-21
Authors: Akkermans, O., Delloye-Bourgeois, C., Peregrina, C., Carrasquero, M., Kokolaki, M., Berbeira-Santana, M., Chavent, M., Reynaud, F., Ritu, R., Agirre, J., Aksu, M., White, E., Lowe, E., Ben Amar, D., Zaballa, S., Huo, J., Pakos, I., McCubbin, P., Comoletti, D., Owens, R., Robinson, C., Castellani, V., del Toro, D., Seiradake, E.
PDB entry 7za2: GPC3-Unc5D octamer structure and role in cell migration
Classification: SIGNALING PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.6 Å
Deposited: 2022-03-21
Authors: Akkermans, O., Delloye-Bourgeois, C., Peregrina, C., Carrasquero, M., Kokolaki, M., Berbeira-Santana, M., Chavent, M., Reynaud, F., Ritu, R., Agirre, J., Aksu, M., White, E., Lowe, E., Ben Amar, D., Zaballa, S., Huo, J., Pakos, I., McCubbin, P., Comoletti, D., Owens, R., Robinson, C., Castellani, V., del Toro, D., Seiradake, E.
PDB entry 7za3: GPC3-Unc5D octamer structure and role in cell migration
Classification: SIGNALING PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2022-03-21
Authors: Akkermans, O., Delloye-Bourgeois, C., Peregrina, C., Carrasquero, M., Kokolaki, M., Berbeira-Santana, M., Chavent, M., Reynaud, F., Ritu, R., Agirre, J., Aksu, M., White, E., Lowe, E., Ben Amar, D., Zaballa, S., Huo, J., Pakos, I., McCubbin, P., Comoletti, D., Owens, R., Robinson, C., Castellani, V., del Toro, D., Seiradake, E.
PDB entry 7za4: GSTF sh155 mutant
Classification: TRANSFERASE
Source organism: Alopecurus myosuroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-03-22
Authors: Papageorgiou, A.C.
PDB entry 7za5: GSTF sh101 mutant
Classification: TRANSFERASE
Source organism: Alopecurus myosuroides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2022-03-22
Authors: Papageorgiou, A.C.
PDB entry 7za6: BRD4 in complex with FragLite4
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7za7: BRD4 in complex with FragLite5
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7za8: BRD4 in complex with FragLite6
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7za9: BRD4 in complex with FragLite7
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7zaa: BRD4 in complex with FragLite11
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7zab: Sam68
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2022-03-22
Authors: Nadal, M., Puestes-Prior, P.
PDB entry 7zac: Sam68
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-03-22
Authors: Nadal, M., Fuentes-Prior, P.
PDB entry 7zad: BRD4 in complex with FragLite12
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7zae: BRD4 in complex with FragLite15
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7zaf: Sam68
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2022-03-22
Authors: Nadal, M., Puestes-Prior, P.
PDB entry 7zag: Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B.
Classification: TRANSLATION
Source organism: Pyrococcus abyssi GE5; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2022-03-22
Authors: Coureux, P.D., Bourgeois, G., Mechulam, Y., Schmitt, E., Kazan, R.
PDB entry 7zah: Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA, aIF1A and aIF5B
Classification: TRANSLATION
Source organism: Pyrococcus abyssi GE5; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-03-22
Authors: Coureux, P.D., Bourgeois, G., Mechulam, Y., Schmitt, E., Kazan, R.
PDB entry 7zai: Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.
Classification: TRANSLATION
Source organism: Pyrococcus abyssi; Pyrococcus abyssi GE5; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-03-22
Authors: Coureux, P.D., Bourgeois, G., Mechulam, Y., Schmitt, E., Kazan, R.
PDB entry 7zaj: BRD4 in complex with FragLite16
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7zak: Crystal structure of HLA-DP (DPA1*02:01-DPB1*01:01) in complex with a peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2022-03-22
Authors: Racle, J., Guillaume, P., Larabi, A., Lau, K., Pojer, F., Gfeller, D.
PDB entry 7zal: FNIP family proteins from Cafeteria roenbergensis virus (CroV): leucine-rich repeats with novel structural features
Classification: UNKNOWN FUNCTION
Source organism: Cafeteria roenbergensis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.732 Å
Deposited: 2022-03-22
Authors: Huyton, T., Goerlich, D.
PDB entry 7zam: Sam68
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2022-03-22
Authors: Nadal, M., Fuentes-Prior, P.
PDB entry 7zan: Crystal Structure of human IL-17A in complex with IL-17RA and IL-17RC
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 5.061 Å
Deposited: 2022-03-22
Authors: Rondeau, J.M., Goepfert, A.
PDB entry 7zao: Structure of BPP43_05035 of Brachyspira pilosicoli
Classification: MEMBRANE PROTEIN
Source organism: Brachyspira pilosicoli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-03-22
Authors: Rajan, A., Gallego, P., Pelaseyed, T.
PDB entry 7zap: Solution structure of RBM39 RRM1 bound to U1 snRNA stem loop 3
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2022-03-22
Authors: Campagne, S., Allain, F.H.
PDB entry 7zaq: BRD4 in complex with FragLite19
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7zar: BRD4 in complex with FragLite18
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7zas: Crystal structure of cleaved Iripin-4 serpin from tick Ixodes ricinus
Classification: IMMUNOSUPPRESSANT
Source organism: Ixodes ricinus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-22
Authors: Kascakova, B., Kuta Smatanova, I., Chmelar, J., Prudnikova, T.
PDB entry 7zat: BRD4 in complex with FragLite20
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2022-03-22
Authors: Turberville, S., Martin, M.P., Hope, I., Noble, M.E.M.
PDB entry 7zau: Fascin-1 in complex with Nb 3E11
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-03-22
Authors: Burgess, S.G., Bayliss, R.
PDB entry 7zav: GPC3-Unc5D octamer structure and role in cell migration
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-03-22
Authors: Akkermans, O., Delloye-Bourgeois, C., Peregrina, C., Carrasquero, M., Kokolaki, M., Berbeira-Santana, M., Chavent, M., Reynaud, F., Ritu, R., Agirre, J., Aksu, M., White, E., Lowe, E., Ben Amar, D., Zaballa, S., Huo, J., Pakos, I., McCubbin, P., Comoletti, D., Owens, R., Robinson, C., Castellani, V., del Toro, D., Seiradake, E.
PDB entry 7zaw: GPC3-Unc5D octamer structure and role in cell migration
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2022-03-22
Authors: Akkermans, O., Delloye-Bourgeois, C., Peregrina, C., Carrasquero, M., Kokolaki, M., Berbeira-Santana, M., Chavent, M., Reynaud, F., Ritu, R., Agirre, J., Aksu, M., White, E., Lowe, E., Ben Amar, D., Zaballa, S., Huo, J., Pakos, I., McCubbin, P., Comoletti, D., Owens, R., Robinson, C., Castellani, V., del Toro, D., Seiradake, E.
PDB entry 7zax: Solution structure of thanatin-like derivative 7 in complex with K. pneumoniae LptA
Classification: ANTIBIOTIC
Source organism: Klebsiella pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2022-03-22
Authors: Oi, K.K., Moehle, K., Zerbe, O.
PDB entry 7zay: Human heparan sulfate polymerase complex EXT1-EXT2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-03-23
Authors: Leisico, F., Omeiri, J., Hons, M., Schoehn, G., Lortat-Jacob, H., Wild, R.
PDB entry 7zaz: macrocyclase OphP with ZPP
Classification: HYDROLASE
Source organism: Omphalotus olearius
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-23
Authors: Song, H., Naismith, J.H.
PDB entry 7zb0: macrocyclase OphP with 15mer
Classification: HYDROLASE
Source organism: Omphalotus olearius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2022-03-23
Authors: Song, H., Naismith, J.H.
PDB entry 7zb1: S580A with 18mer
Classification: LYASE
Source organism: Omphalotus olearius
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-23
Authors: Song, H., Naismith, J.H.
PDB entry 7zb2: apo macrocyclase OphP
Classification: HYDROLASE
Source organism: Omphalotus olearius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-03-23
Authors: Song, H., Naismith, J.H.
PDB entry 7zb3: Crystal structure of beta-xylosidase from Thermotoga maritima in complex with xylohexaose hydrolysed to xylobiose
Classification: HYDROLASE
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2022-03-23
Authors: Gloster, T.M., Foltanyi, F.
PDB entry 7zb5: Mot1(1-1836):TBP:DNA - post-hydrolysis complex dimer
Classification: TRANSCRIPTION
Source organism: Chaetomium thermophilum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-03-23
Authors: Woike, S., Eustermann, S., Jung, J., Wenzl, S.J., Hagemann, G., Bartho, J.D., Lammens, K., Butryn, A., Herzog, F., Hopfner, K.-P.
PDB entry 7zb6: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) variant C44S at 2.12 A resolution
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2022-03-23
Authors: Paknia, E., Rabe von Pappenheim, F., Funk, L.-M., Tittmann, K., Chari, A.
PDB entry 7zb7: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) variant Y54F at 1.63 A resolution
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-03-23
Authors: Paknia, E., Rabe von Pappenheim, F., Funk, L.-M., Tittmann, K., Chari, A.
PDB entry 7zb8: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) variant K61A at 2.48 A resolution
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2022-03-23
Authors: Paknia, E., Rabe von Pappenheim, F., Funk, L.-M., Tittmann, K., Chari, A.
PDB entry 7zb9: Crystal structure of CYP124 in complex with inhibitor carbethoxyhexyl imidazole in the absence of glycerol (NoCryo)
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2022-03-23
Authors: Bukhdruker, S., Varaksa, T., Marin, E., Gilep, A., Strushkevich, N., Borshchevskiy, V.
PDB entry 7zba: HaloTag with Me-TRaQ-G ligand
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2022-03-23
Authors: Emmert, S., Rivera-Fuentes, P., Pojer, F., Lau, K.
PDB entry 7zbb: HaloTag with TRaQ-G-ctrl ligand
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-03-23
Authors: Emmert, S., Rivera-Fuentes, P., Pojer, F., Lau, K.
PDB entry 7zbc: Dark state crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SACLA)
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-23
Authors: Gruhl, T., Weinert, T., Rodrigues, M.J., Milne, C., Ortolani, G., Nass, K., Nango, E., Sen, S., Johnson, P., Cirelli, C., Furrer, A., Mous, S., Skopintsev, P., James, D., Dworkowski, F., Baath, P., Kekilli, D., Oserov, D., Tanaka, R., Glover, H., Bacellar, C., Bruenle, S., Casadei, C., Diethelm, A., Gashi, D., Gotthard, G., Guixa-Gonzalez, R., Joti, Y., Kabanova, V., Knopp, G., Lesca, E., Ma, P., Martiel, I., Muehle, J., Owada, S., Pamula, F., Sarabi, S., Tejero, O., Tsai, C.J., Varma, N., Wach, A., Boutet, S., Tono, K., Nogly, P., Deupi, X., Iwata, S., Neutze, R., Standfuss, J., Schertler, G.F.X., Panneels, V.
PDB entry 7zbd: HaloTag with TRaQ-G ligand
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2022-03-23
Authors: Emmert, S., Rivera-Fuentes, P., Pojer, F., Lau, K.
PDB entry 7zbe: Dark state crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SwissFEL)
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-23
Authors: Gruhl, T., Weinert, T., Rodrigues, M.J., Milne, C., Ortolani, G., Nass, K., Nango, E., Sen, S., Johnson, P., Cirelli, C., Furrer, A., Mous, S., Skopintsev, P., James, D., Dworkowski, F., Baath, P., Kekilli, D., Oserov, D., Tanaka, R., Glover, H., Bacellar, C., Bruenle, S., Casadei, C., Diethelm, A., Gashi, D., Gotthard, G., Guixa-Gonzalez, R., Joti, Y., Kabanova, V., Knopp, G., Lesca, E., Ma, P., Martiel, I., Muehle, J., Owada, S., Pamula, F., Sarabi, D., Tejero, O., Tsai, C.J., Varma, N., Wach, A., Boutet, S., Tono, K., Nogly, P., Deupi, X., Iwata, S., Neutze, R., Standfuss, J., Schertler, G.F.X., Panneels, V.
PDB entry 7zbf: Crystal structure of native Iripin-4 serpin from tick Ixodes ricinus
Classification: IMMUNOSUPPRESSANT
Source organism: Ixodes ricinus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-03-23
Authors: Kascakova, B., Kuta Smatanova, I., Chmelar, J., Prudnikova, T.
PDB entry 7zbg: Human Topoisomerase II Beta ATPase ADP
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-03-23
Authors: Ling, E.M., Basle, A., Cowell, I.G., Blower, T.R., Austin, C.A.
PDB entry 7zbh: ATP-dependent zinc metalloprotease FtsH (BB0789) from Borrelia burgdorferi
Classification: HYDROLASE
Source organism: Borreliella burgdorferi B31
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2022-03-23
Authors: Brangulis, K.
PDB entry 7zbn: Cryo-EM structure of the human GS-GN complex in the inhibited state
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2022-03-23
Authors: Marr, L., Zeqiraj, E.
PDB entry 7zbo: Amine Dehydrogenase MATOUAmDH2 in complex with NADP+
Classification: OXIDOREDUCTASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-03-24
Authors: Bennett, M., Ducrot, L., Vergne-Vaxelaire, C., Grogan, G.
PDB entry 7zbp: Unspecific peroxygenase from Marasmius rotula
Classification: OXIDOREDUCTASE
Source organism: Marasmius rotula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-03-24
Authors: Santillana, E., Romero, A.
PDB entry 7zbq: Structure of the ADP-ribosyltransferase TccC3HVR from Photorhabdus Luminescens
Classification: TOXIN
Source organism: Photorhabdus luminescens
Experimental method: SOLUTION NMR
Deposited: 2022-03-24
Authors: Lindemann, F., Belyy, A., Friedrich, D., Schmieder, P., Bardiaux, B., Roderer, D., Funk, J., Protze, J., Bieling, P., Oschkinat, H., Raunser, S.
PDB entry 7zbr: Crystal Structure of full-length Bartonella Effector protein 1
Classification: TOXIN
Source organism: Bartonella clarridgeiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-03-24
Authors: Huber, M.
PDB entry 7zbs: Solution NMR structure of the HTH_8cm consensus miniprotein in 30% TFE at 278K
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-03-24
Authors: Socha, O., Jakubec, D.
PDB entry 7zbt: Subtomogram averaging of Rubisco from native Halothiobacillus carboxysomes
Classification: UNKNOWN FUNCTION
Source organism: Halothiobacillus neapolitanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-03-24
Authors: Ni, T., Zhu, Y., Yu, X., Sun, Y., Liu, L., Zhang, P.
PDB entry 7zbu: CryoEM structure of SARS-CoV-2 spike monomer in complex with neutralising antibody P008_60
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.31 Å
Deposited: 2022-03-24
Authors: Rosa, A., Pye, V.E., Cronin, N., Cherepanov, P.
PDB entry 7zbv: Crystal structure of the peptidase domain of collagenase G from Clostridium histolyticum in complex with a diphosphonate-based inhibitor
Classification: HYDROLASE
Source organism: Hathewaya histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-03-24
Authors: Schoenauer, E., Brandstetter, H.
PDB entry 7zbw: CAND1-SCF-SKP2 CAND1 rolling-2 SCF engaged
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-03-24
Authors: Baek, K., Schulman, B.A.
PDB entry 7zbz: CAND1 delhairpin-SCF-SKP2 CAND1 partly engaged SCF partly rocked
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-24
Authors: Baek, K., Schulman, B.A.
PDB entry 7zc0: 4,6-alpha-glucanotransferase GtfC from Geobacillus 12AMOR1
Classification: TRANSFERASE
Source organism: Geobacillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-03-25
Authors: Pijning, T., Dijkhuizen, L., Guskov, A., te Poele, E.M.
PDB entry 7zc1: Subtomogram averaging of Rubisco from Cyanobium carboxysome
Classification: UNKNOWN FUNCTION
Source organism: Cyanobium sp. PCC 7001
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-03-25
Authors: Ni, T., Zhu, Y., Seaton-Burn, W., Zhang, P.
PDB entry 7zc2: Dipeptide and tripeptide Permease C (DtpC)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2022-03-25
Authors: Killer, M., Finocchio, G., Pardon, E., Steyaert, J., Loew, C.
PDB entry 7zc3: Crystal structure of human copper chaperone Atox1 bound to zinc ion by CxxC motif
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-25
Authors: Mangini, V., Belviso, B.D., Arnesano, F., Caliandro, R.
PDB entry 7zc4: Cryo-EM structure of POLRMT mutant.
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2022-03-25
Authors: Das, H., Hallberg, B.M.
PDB entry 7zc5: Complex I from E. coli, DDM/LMNG-purified, under Turnover at pH 8, Resting state
Classification: PROTON TRANSPORT
Source organism: Escherichia coli BL21
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-03-25
Authors: Kravchuk, V., Kampjut, D., Sazanov, L.
PDB entry 7zc6: Na+ - translocating ferredoxin: NAD+ reductase (Rnf) of C. tetanomorphum
Classification: FLAVOPROTEIN
Source organism: Clostridium tetanomorphum
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.27 Å
Deposited: 2022-03-25
Authors: Ermler, U., Vitt, S., Buckel, W.
PDB entry 7zc7: Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH012941
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-03-25
Authors: Davies, J.R., Scaletti, E., Stenmark, P.
PDB entry 7zc8: Crystal structure of the C-terminal domain of FusB, a TonB homologue
Classification: PROTEIN TRANSPORT
Source organism: Pectobacterium carotovorum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-03-25
Authors: Wojnowska, M., Walker, D., Yelland, T.
PDB entry 7zc9: Human Pikachurin/EGFLAM C-terminal Laminin-G domain (LG3)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-26
Authors: Pantalone, S., Forneris, F.
PDB entry 7zca: Crystal structure of the F191M/F201A variant of Variovorax paradoxus indole monooxygenase (VpIndA1) in complex with benzyl phenyl sulfoxide
Classification: OXIDOREDUCTASE
Source organism: Variovorax paradoxus EPS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2022-03-26
Authors: Kratky, J., Weisse, R., Strater, N.
PDB entry 7zcb: Human Pikachurin/EGFLAM N-terminal Fibronectin-III (1-2) domains
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-26
Authors: Pantalone, S., Savino, S., Viti, L.V., Forneris, F.
PDB entry 7zcc: yxBC from Bacillus subtilis in complex with Mn and N-oxalylglycine (NOG)
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.848 Å
Deposited: 2022-03-27
Authors: Chowdhury, R., Schofield, C.J.
PDB entry 7zcd: Mutant L39Y-L58F of recombinant bovine beta-lactoglobulin in complex with pramocaine
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-27
Authors: Loch, J.I., Kurpiewska, K., Bonarek, P.
PDB entry 7zce: SARS-CoV-2 Spike protein in complex with the single chain fragment scFv76
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-03-28
Authors: Chaves-Sanjuan, A., Bolognesi, M.
PDB entry 7zcf: SARS-CoV-2 Spike RBD in complex with the single chain fragment scFv76 (Focused Refinement)
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-03-28
Authors: Chaves-Sanjuan, A., Bolognesi, M.
PDB entry 7zcg: CHMP2A-CHMP3 heterodimer (430 Angstrom diameter)
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-03-28
Authors: Azad, K., Desfosses, A., Effantin, G., Schoehn, G., Weissenhorn, W.
PDB entry 7zch: CHMP2A-CHMP3 heterodimer (410 Angstrom diameter)
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-03-28
Authors: Azad, K., Desfosses, A., Effantin, G., Schoehn, G., Weissenhorn, W.
PDB entry 7zci: Complex I from E. coli, LMNG-purified, under Turnover at pH 6, Resting state
Classification: PROTON TRANSPORT
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2022-03-28
Authors: Kravchuk, V., Kampjut, D., Sazanov, L.
PDB entry 7zcj: Crystal structure of Pizza6-TNH-TSH with Silicotungstic Acid (STA) polyoxometalate
Classification: UNKNOWN FUNCTION
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-03-28
Authors: Wouters, S.M.L., Kamata, K., Takahashi, K., Vandebroek, L., Parac-Vogt, T.N., Tame, J.R.H., Voet, A.R.D.
PDB entry 7zck: Room temperature crystal structure of PhnD from Synechococcus MITS9220 in complex with phosphate
Classification: TRANSPORT PROTEIN
Source organism: Synechococcus sp. MIT S9220
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-03-28
Authors: Mikolajek, H., Shah, B.S., Paulsen, I.T., Sandy, J., Sanchez-Weatherby, J.
PDB entry 7zcl: Unspecific peroxygenase from Collariella virescens
Classification: OXIDOREDUCTASE
Source organism: Collariella virescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-03-28
Authors: Santillana, E., Romero, A.
PDB entry 7zcm: Dark state structure of Sensory Rhodopsin II in complex with HtrII solved by room temperature serial synchrotron crystallography
Classification: MEMBRANE PROTEIN
Source organism: Natronomonas pharaonis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-03-28
Authors: Ortolani, G., Bosman, R., Ostojic, L.
PDB entry 7zcn: Nitrite-bound MSOX movie series dataset 1 (0.8 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) - nitrite (start)
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp. ORS 375
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2022-03-28
Authors: Rose, S.L., Baba, S., Okumura, H., Antonyuk, S.V., Sasaki, D., Tosha, T., Kumasaka, T., Eady, R.R., Yamamoto, M., Hasnain, S.S.
PDB entry 7zco: Nitrite-bound MSOX movie series dataset 8 (6.4 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) - nitrite/NO intermediate
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp. ORS 375
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2022-03-28
Authors: Rose, S.L., Baba, S., Okumura, H., Antonyuk, S.V., Sasaki, D., Tosha, T., Kumasaka, T., Eady, R.R., Yamamoto, M., Hasnain, S.S.
PDB entry 7zcp: Nitrite-bound MSOX movie series dataset 17 (13.6 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) - nitric oxide (NO) intermediate
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp. ORS 375
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2022-03-28
Authors: Rose, S.L., Baba, S., Okumura, H., Antonyuk, S.V., Sasaki, D., Tosha, T., Kumasaka, T., Eady, R.R., Yamamoto, M., Hasnain, S.S.
PDB entry 7zcq: Nitrite-bound MSOX movie series dataset 25 (20 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) - NO/water intermediate
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp. ORS 375
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-03-28
Authors: Rose, S.L., Baba, S., Okumura, H., Antonyuk, S.V., Sasaki, D., Tosha, T., Kumasaka, T., Eady, R.R., Yamamoto, M., Hasnain, S.S.
PDB entry 7zcr: Nitrite-bound MSOX movie series dataset 38 (30.4 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) - water ligand
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp. ORS 375
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-03-28
Authors: Rose, S.L., Baba, S., Okumura, H., Antonyuk, S.V., Sasaki, D., Tosha, T., Kumasaka, T., Eady, R.R., Yamamoto, M., Hasnain, S.S.
PDB entry 7zcs: Nitrite-bound MSOX movie series dataset 65 (52 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) - water ligand (final)
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp. ORS 375
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2022-03-28
Authors: Rose, S.L., Baba, S., Okumura, H., Antonyuk, S.V., Sasaki, D., Tosha, T., Kumasaka, T., Eady, R.R., Yamamoto, M., Hasnain, S.S.
PDB entry 7zct: Structure of the red fluorescent protein mScarlet3 at pH 7.5
Classification: FLUORESCENT PROTEIN
Source organism: Discosoma sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2022-03-28
Authors: Aumonier, S., Dupuy, J., Royant, A.
PDB entry 7zcu: PucA-LH2 complex from Rps. palustris
Classification: PHOTOSYNTHESIS
Source organism: Rhodopseudomonas palustris ATCC 17001
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-03-28
Authors: Qian, P., Cogdell, R.J.
PDB entry 7zcv: Rgg144 of Streptococcus pneumoniae
Classification: DNA BINDING PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-29
Authors: Wallis, R., Girija, U.V., Yesilkaya, H.
PDB entry 7zcw: Cryo-EM structure of GMPCPP-microtubules in complex with VASH2-SVBP
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-03-29
Authors: Choi, S.R., Blum, T., Steinmetz, M.O.
PDB entry 7zcx: S-layer protein SlaA from Sulfolobus acidocaldarius at pH 4.0
Classification: STRUCTURAL PROTEIN
Source organism: Sulfolobus acidocaldarius
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-29
Authors: Gambelli, L., Isupov, M.N., Daum, B.