LiteFold/PDB huggingface dataset:
PDB entry 3db0: Crystal structure of Putative Pyridoxamine 5'-phosphate oxidase (NP_472219.1) from LISTERIA INNOCUA at 2.00 A resolution
Classification: OXIDOREDUCTASE
Source organism: Listeria innocua
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3db1: Crystal structure of the 2H-phosphatase domain of Sts-2 in complex with phosphate
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2008-05-30
Authors: Nassar, N., Chen, Y., Carpino, N.
PDB entry 3db2: Crystal structure of a putative nadph-dependent oxidoreductase (dhaf_2064) from desulfitobacterium hafniense dcb-2 at 1.70 A resolution
Classification: OXIDOREDUCTASE
Source organism: Desulfitobacterium hafniense DCB-2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3db3: Crystal structure of the tandem tudor domains of the E3 ubiquitin-protein ligase UHRF1 in complex with trimethylated histone H3-K9 peptide
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-05-30
Authors: Walker, J.R., Avvakumov, G.V., Xue, S., Dong, A., Li, Y., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 3db4: Crystal structure of the tandem tudor domains of the E3 ubiquitin-protein ligase UHRF1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-05-30
Authors: Walker, J.R., Avvakumov, G.V., Xue, S., Dong, A., Li, Y., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 3db5: Crystal structure of methyltransferase domain of human PR domain-containing protein 4
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-05-30
Authors: Amaya, M.F., Zeng, H., Loppnau, P., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Min, J., Plotnikov, A.N., Wu, H., Structural Genomics Consortium (SGC)
PDB entry 3db6: Crystal structure of an activated (Thr->Asp) Polo-like kinase 1 (Plk1) catalytic domain in complex with Compound 902
Classification: TRANSFERASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2008-05-30
Authors: Elling, R.A., Fucini, R.V., Zhu, J., Barr, K.J., Romanowski, M.J.
PDB entry 3db7: Crystal structure of a putative calcium-regulated periplasmic protein (bt0923) from bacteroides thetaiotaomicron at 1.40 A resolution
Classification: Ca-BINDING PROTEIN
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-05-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3db8: Crystal structure of an activated (Thr->Asp) Polo-like kinase 1 (Plk1) catalytic domain in complex with Compound 041
Classification: TRANSFERASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2008-05-30
Authors: Elling, R.A., Hanan, E.J., Lew, W., Romanowski, M.J.
PDB entry 3db9: Crystal structure of UPF0317 protein Atu3911 from Agrobacterium tumefaciens. NorthEast Strcutural Genomics target AtR186
Classification: structural genomics, unknown function
Source organism: Agrobacterium tumefaciens str. C58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-05-30
Authors: Seetharaman, J., Abashidze, M., Wang, D., Janjua, H., Owens, L., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3dba: Crystal structure of the cGMP-bound GAF a domain from the photoreceptor phosphodiesterase 6C
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2008-05-30
Authors: Martinez, S.E., Heikaus, C.C., Klevit, R.E., Beavo, J.A.
PDB entry 3dbc: Crystal structure of an activated (Thr->Asp) Polo-like kinase 1 (Plk1) catalytic domain in complex with Compound 257
Classification: TRANSFERASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2008-05-31
Authors: Elling, R.A., Zhu, J., Barr, K.J., Romanowski, M.J.
PDB entry 3dbd: Crystal structure of an activated (Thr->Asp) Polo-like kinase 1 (Plk1) catalytic domain in complex with Compound 094
Classification: TRANSFERASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2008-05-31
Authors: Elling, R.A., Barr, K.J., Romanowski, M.J.
PDB entry 3dbe: Crystal structure of an activated (Thr->Asp) Polo-like kinase 1 (Plk1) catalytic domain in complex with Compound 557
Classification: TRANSFERASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2008-05-31
Authors: Elling, R.A., Barr, K.J., Romanowski, M.J.
PDB entry 3dbf: Crystal structure of an activated (Thr->Asp) Polo-like kinase 1 (Plk1) catalytic domain in complex with Compound 562
Classification: TRANSFERASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-05-31
Authors: Elling, R.A., Zhu, J., Barr, K.J., Romanowski, M.J.
PDB entry 3dbg: Crystal structure of Cytochrome P450 170A1 (CYP170A1) from Streptomyces coelicolor
Classification: OXIDOREDUCTASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-05-31
Authors: Zhao, B., Vassylyev, D.G., Waterman, M.R.
PDB entry 3dbh: Structural Dissection of a Gating Mechanism Preventing Misactivation of Ubiquitin by NEDD8's E1 (APPBP1-UBA3Arg190Ala-NEDD8Ala72Arg)
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2008-05-31
Authors: Souphron, J., Schulman, B.A.
PDB entry 3dbi: CRYSTAL STRUCTURE OF SUGAR-BINDING TRANSCRIPTIONAL REGULATOR (LACI FAMILY) FROM ESCHERICHIA COLI COMPLEXED WITH PHOSPHATE
Classification: TRANSCRIPTION REGULATOR
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2008-06-01
Authors: Patskovsky, Y., Ozyurt, S., Freeman, J., Wu, B., Maletic, M., Koss, J., Wasserman, S.R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3dbj: Allophycocyanin from Thermosynechococcus vulcanus
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus vulcanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-06-01
Authors: Adir, N., Klartag, M., McGregor, A., David, L.
PDB entry 3dbk: Pseudomonas aeruginosa elastase with phosphoramidon
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-06-01
Authors: McKay, D.B., Overgaard, M.T.
PDB entry 3dbl: Structural Dissection of a Gating Mechanism Preventing Misactivation of Ubiquitin by NEDD8's E1 (APPBP1-UBA3Arg190wt-NEDD8Ala72Gln)
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-06-01
Authors: Souphron, J., Schulman, B.A.
PDB entry 3dbm: Crystal Structure of Allene oxide synthase
Classification: LYASE
Source organism: Parthenium argentatum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-06-01
Authors: Li, L., Wang, X.
PDB entry 3dbn: Crystal structure of the Streptoccocus suis serotype2 D-mannonate dehydratase in complex with its substrate
Classification: LYASE
Source organism: Streptococcus suis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-06-02
Authors: Peng, H., Zhang, Q., Gao, F., Gao, G.F.
PDB entry 3dbo: Crystal structure of a member of the VapBC family of toxin-antitoxin systems, VapBC-5, from Mycobacterium tuberculosis
Classification: TOXIN/ANTITOXIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2008-06-02
Authors: Miallau, L., Cascio, D., Eisenberg, D., Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)
PDB entry 3dbp: Crystal Structure of Human Orotidine 5'-Monophosphate Decarboxylase Complexed with 6-NH2-UMP
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-06-02
Authors: Liu, Y., To, T., Bello, A.M., Kotra, L.P., Pai, E.F.
PDB entry 3dbq: Crystal structure of TTK kinase domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-06-02
Authors: Wang, W., Yang, Y.T., Gao, Y.F., Zhu, S.C., Wang, F., Old, W., Xu, Q.B., Resing, K., Ahn, N., Lei, M., Liu, X.D.
PDB entry 3dbr: Structural Dissection of a Gating Mechanism Preventing Misactivation of Ubiquitin by NEDD8's E1 (APPBP1-UBA3Arg190Gln-NEDD8Ala72Arg)
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2008-06-02
Authors: Souphron, J., Schulman, B.A.
PDB entry 3dbs: Structure of PI3K gamma in complex with GDC0941
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-06-02
Authors: Wiesmann, C., Ultsch, M.
PDB entry 3dbu: Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-06-02
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.
PDB entry 3dbv: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE MUTANT WITH LEU 33 REPLACED BY THR, THR 34 REPLACED BY GLY, ASP 36 REPLACED BY GLY, LEU 187 REPLACED BY ALA, AND PRO 188 REPLACED BY SER COMPLEXED WITH NAD+
Classification: OXIDOREDUCTASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 1997-01-06
Authors: Didierjean, C., Rahuel-Clermont, S., Vitoux, B., Dideberg, O., Branlant, G., Aubry, A.
PDB entry 3dbx: Structure of chicken CD1-2 with bound fatty acid
Classification: IMMUNE SYSTEM
Source organism: Gallus gallus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-06-02
Authors: Zajonc, D.M., Wilson, I.A.
PDB entry 3dby: Crystal structure of uncharacterized protein from Bacillus cereus G9241 (CSAP Target)
Classification: structural genomics, unknown function
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-06-02
Authors: Ramagopal, U.A., Bonanno, J.B., Ozyurt, S., Freeman, J., Wasserman, S., Hu, S., Groshong, C., Rodgers, L., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3dbz: human surfactant protein D
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-02
Authors: Head, J.F.
PDB entry 3dc0: Crystal structure of native alpha-amylase from Bacillus sp. KR-8104
Classification: HYDROLASE
Source organism: Bacillus sp. KR8104
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2008-06-03
Authors: Alikhajeh, J., Khajeh, K., Ranjbar, B., Naderi-Manesh, M., Naderi-Manesh, H., Chen, C.J.
PDB entry 3dc1: Crystal structure of kynurenine aminotransferase II complex with alpha-ketoglutarate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-06-03
Authors: Han, Q., Cai, T., Tagle, D.A., Robinson, H., Li, J.
PDB entry 3dc2: Crystal structure of serine bound D-3-phosphoglycerate dehydrogenase from Mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-06-03
Authors: Dey, S., Sacchettini, J.C.
PDB entry 3dc3: Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-06-03
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.
PDB entry 3dc4: Crystal structure of the Drosophila kinesin family member NOD in complex with ADP
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-03
Authors: Cochran, J.C., Mulko, N.K., Kull, F.J.
PDB entry 3dc5: Crystal Structure of a manganese superoxide dismutases from Caenorhabditis elegans
Classification: OXIDOREDUCTASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-06-03
Authors: Trinh, C.H., Hunter, T., Stewart, E.E., Phillips, S.E.V., Hunter, G.J.
PDB entry 3dc6: Crystal Structure of a manganese superoxide dismutases from Caenorhabditis elegans
Classification: OXIDOREDUCTASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-03
Authors: Trinh, C.H., Hunter, T., Stewart, E.E., Phillips, S.E.V., Hunter, G.J.
PDB entry 3dc7: Crystal structure of the protein Q88SR8 from Lactobacillus plantarum. Northeast Structural Genomics consortium target LpR109.
Classification: structural genomics, unknown function
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2008-06-03
Authors: Kuzin, A.P., Abashidze, M., Vorobiev, S.M., Seetharaman, J., Zhao, L., Mao, L., Ciccosanti, C., Xiao, R., Nair, R., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3dc8: Crystal structure of dihydropyrimidinase from Sinorhizobium meliloti
Classification: HYDROLASE
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-06-03
Authors: Gavira, J.A., Martinez-Rodriguez, S.
PDB entry 3dc9: Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-06-03
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.
PDB entry 3dca: Crystal structure of the RPA0582- protein of unknown function from Rhodopseudomonas palustris- a structural genomics target
Classification: structural genomics, unknown function
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2008-06-03
Authors: Sledz, P., Wang, S., Chruszcz, M., Yim, V., Kudritska, M., Evdokimova, E., Turk, D., Savchenko, A., Edwards, A., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3dcb: Crystal structure of the Drosophila kinesin family member NOD in complex with AMPPNP
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-06-03
Authors: Cochran, J.C., Mulko, N.K., Kull, F.J.
PDB entry 3dcc: Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-06-03
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.
PDB entry 3dcd: X-ray structure of the galactose mutarotase related enzyme Q5FKD7 from Lactobacillus acidophilus at the resolution 1.9A. Northeast Structural Genomics consortium target LaR33.
Classification: structural genomics, unknown function
Source organism: Lactobacillus acidophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-03
Authors: Kuzin, A.P., Lew, S., Vorobiev, S.M., Seetharaman, J., Wang, H., Mao, L., Foote, E.L., Xiao, R., Nair, R., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3dcf: Crystal structure of transcriptional regulator of the TetR/AcrR family (YP_290855.1) from THERMOBIFIDA FUSCA YX-ER1 at 2.50 A resolution
Classification: transcription regulator
Source organism: Thermobifida fusca YX
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-06-03
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dcg: Crystal Structure of the HIV Vif BC-box in Complex with Human ElonginB and ElonginC
Classification: LIGASE/VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-06-03
Authors: Stanley, B.J., Ehrlich, E.S., Short, L., Yu, Y., Xiao, Z., Yu, X.-F., Xiong, Y.
PDB entry 3dci: The Structure of a putative arylesterase from Agrobacterium tumefaciens str. C58
Classification: HYDROLASE
Source organism: Agrobacterium tumefaciens str.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-06-03
Authors: Cuff, M.E., Xu, X., Zheng, H., Binkowski, T.A., Edwards, A., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3dcj: Crystal structure of glycinamide formyltransferase (PurN) from Mycobacterium tuberculosis in complex with 5-methyl-5,6,7,8-tetrahydrofolic acid derivative
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-06-03
Authors: Zhang, Z., Squire, C.J., Baker, E.N.
PDB entry 3dck: X-ray structure of D25N chemical analogue of HIV-1 protease complexed with ketomethylene isostere inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-03
Authors: Torbeev, V.Y., Mandal, K., Terechko, V.A., Kent, S.B.H.
PDB entry 3dcl: Crystal structure of TM1086
Classification: structural genomics, unknown function
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-06-03
Authors: Chruszcz, M., Evdokimova, E., Kudritska, M., Savchenko, A., Edwards, A., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3dcm: Crystal structure of the Thermotoga maritima SPOUT family RNA-methyltransferase protein Tm1570 in complex with S-adenosyl-L-methionine
Classification: TRANSFERASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-06-04
Authors: Kim, D.J., Kim, H.S., Lee, S.J., Suh, S.W.
PDB entry 3dcn: Glomerella cingulata apo cutinase
Classification: HYDROLASE
Source organism: Glomerella cingulata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-04
Authors: Nyon, M.P., Rice, D.W., Berrisford, J.M., Hounslow, A.M., Moir, A.J.G., Huang, H., Nathan, S., Mahadi, N.M., Farah Diba, A.B., Craven, C.J.
PDB entry 3dco: Drosophila NOD (3DC4) and Bovine Tubulin (1JFF) Docked into the 11-Angstrom Cryo-EM Map of Nucleotide-Free NOD Complexed to the Microtubule
Classification: MOTOR PROTEIN
Source organism: Bos taurus; Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 11 Å
Deposited: 2008-06-04
Authors: Sindelar, C.V., Cochran, J.C., Kull, F.J.
PDB entry 3dcp: Crystal structure of the putative histidinol phosphatase hisK from Listeria monocytogenes. Northeast Structural Genomics Consortium target LmR141.
Classification: HYDROLASE
Source organism: Listeria monocytogenes str. 4b H7858
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-06-04
Authors: Vorobiev, S.M., Su, M., Seetharaman, J., Zhao, L., Mao, L., Foote, E.L., Xiao, R., Nair, R., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3dcq: LECB (PA-LII) in complex with the synthetic ligand 2G0
Classification: SUGAR BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-04
Authors: Johansson, E.M., Crusz, S.A., Kolomiets, E., Buts, L., Kadam, R.U., Cacciarini, M., Bartels, K.M., Diggle, S.P., Camara, M., Williams, P., Loris, R., Nativi, C., Rosenau, F., Jaeger, K.E., Darbre, T., Reymond, J.L.
PDB entry 3dcr: X-ray structure of HIV-1 protease and hydrated form of ketomethylene isostere inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-06-04
Authors: Torbeev, V.Y., Mandal, K., Terechko, V.A., Kent, S.B.H.
PDB entry 3dcs: Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-04
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.
PDB entry 3dct: FXR with SRC1 and GW4064
Classification: TRANSCRIPTION/TRANSCRIPTION ACTIVATOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-06-04
Authors: Williams, S.P., Madauss, K.P.
PDB entry 3dcu: FXR with SRC1 and GSK8062
Classification: TRANSCRIPTION/TRANSCRIPTION ACTIVATOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-06-04
Authors: Williams, S.P., Madauss, K.P.
PDB entry 3dcv: Crystal structure of human Pim1 kinase complexed with 4-(4-hydroxy-3-methyl-phenyl)-6-phenylpyrimidin-2(1H)-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-06-04
Authors: Bellamacina, C.R., Shafer, C.M., Lindvall, M., Gesner, T.G., Yabannavar, A., Weiping, J., Song, L., Walter, A.
PDB entry 3dcw: Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-06-04
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.
PDB entry 3dcx: Crystal structure of a duf1696 family protein with a pleckstrin-homology domain (shew_0819) from shewanella loihica pv-4 at 2.00 A resolution
Classification: UNKNOWN FUNCTION
Source organism: Shewanella loihica PV-4
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-06-04
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dcy: Crystal Structure a TP53-induced glycolysis and apoptosis regulator protein from Homo sapiens.
Classification: apoptosis regulator
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.748 Å
Deposited: 2008-06-04
Authors: McCoy, J.G., Bingman, C.A., Wesenberg, G.E., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 3dcz: CRYSTAL STRUCTURE OF A PUTATIVE RNFG SUBUNIT OF ELECTRON TRANSPORT COMPLEX (TM0246) FROM THERMOTOGA MARITIMA AT 1.65 A RESOLUTION
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-06-04
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dd0: Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2008-06-04
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.
PDB entry 3dd1: Crystal structure of glycogen phophorylase complexed with an anthranilimide based inhibitor GSK254
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2008-06-04
Authors: Nolte, R.T.
PDB entry 3dd2: Crystal structure of an RNA aptamer bound to human thrombin
Classification: Hydrolase/HYDROLASE INHIBITOR/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-04
Authors: Long, S.B., Sullenger, B.A.
PDB entry 3dd3: Crystal Structure of the Glutathione Transferase Pi enzyme in complex with the bifunctional inhibitor, Etharapta
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-06-05
Authors: Parker, L.J.
PDB entry 3dd4: Structural Basis of KChIP4a Modulation of Kv4.3 Slow Inactivation
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-06-05
Authors: Chai, J., Wang, H., Wang, K.
PDB entry 3dd5: Glomerella cingulata E600-cutinase complex
Classification: HYDROLASE
Source organism: Glomerella cingulata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-06-05
Authors: Nyon, M.P., Rice, D.W., Berrisford, J.M., Hounslow, A.M., Moir, A.J.G., Huang, H., Nathan, S., Mahadi, N.M., Farah Diba, A.B., Craven, C.J.
PDB entry 3dd6: Crystal structure of Rph, an exoribonuclease from Bacillus anthracis at 1.7 A resolution
Classification: TRANSFERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.702 Å
Deposited: 2008-06-05
Authors: Rawlings, A.E., Blagova, E.V., Levdikov, V.M., Fogg, M.J., Wilson, K.S., Wilkinson, A.J., Structural Proteomics in Europe 2 (SPINE-2)
PDB entry 3dd7: Structure of DocH66Y in complex with the C-terminal domain of Phd
Classification: RIBOSOME INHIBITOR
Source organism: Enterobacteria phage P1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-06-05
Authors: Garcia-Pino, A., Loris, R.
PDB entry 3dd8: Carbonic anhydrase inhibitors. Interaction of the antitumor sulfamate EMD-486019 with twelve mammalian isoforms: kinetic and X-Ray crystallographic studies
Classification: LYASE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-05
Authors: Temperini, C., Innocenti, A., Scozzafava, A., Supuran, C.T.
PDB entry 3dd9: Structure of DocH66Y dimer
Classification: RIBOSOME INHIBITOR
Source organism: Enterobacteria phage P1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2008-06-05
Authors: Garcia-Pino, A., Loris, R.
PDB entry 3dda: Crystal structure of the catalytic domain of Botulinum neurotoxin serotype a with a snap-25 peptide
Classification: HYDROLASE
Source organism: Clostridium botulinum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-06-05
Authors: Kumaran, D., Swaminathan, S.
PDB entry 3ddb: Crystal structure of the catalytic domain of Botulinum neurotoxin serotype a with a substrate analog peptide
Classification: HYDROLASE
Source organism: Clostridium botulinum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-06-05
Authors: Kumaran, D., Swaminathan, S.
PDB entry 3ddc: Crystal Structure of NORE1A in Complex with RAS
Classification: HYDROLASE/APOPTOSIS
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-05
Authors: Stieglitz, B., Bee, C., Schwarz, D., Yildiz, O., Moshnikova, A., Khokhlatchev, A., Herrmann, C.
PDB entry 3ddd: Crystal structure of A Putative Acetyltransferase (NP_142035.1) from PYROCOCCUS HORIKOSHII at 2.25 A resolution
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-06-05
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dde: Crystal structure of a domain of unknown function with a heme oxygenase-like fold (sden_3740) from shewanella denitrificans os217 at 2.30 A resolution
Classification: UNKNOWN FUNCTION
Source organism: Shewanella denitrificans OS217
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-06-05
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ddf: GOLGI MANNOSIDASE II complex with (3R,4R,5R)-3,4-Dihydroxy-5-({[(1R)-2-hydroxy-1 phenylethyl]amino}methyl) pyrrolidin-2-one
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-06-05
Authors: Kuntz, D.A., Rose, D.R., Hoffman, D.
PDB entry 3ddg: GOLGI MANNOSIDASE II complex with (3R,4R,5R)-3,4-Dihydroxy-5-({[(1R)-2-hydroxy-1 phenylethyl]amino}methyl) methylpyrrolidin-2-one
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2008-06-05
Authors: Kuntz, D.A., Rose, D.R., Hoffman, D.
PDB entry 3ddh: The structure of a putative haloacid dehalogenase-like family hydrolase from Bacteroides thetaiotaomicron VPI-5482
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-06-05
Authors: Cuff, M.E., Duggan, E., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ddi: Crystal structure of the mimivirus NDK +Kpn-N62L-R107G triple mutant complexed with TDP
Classification: TRANSFERASE
Source organism: Acanthamoeba polyphaga mimivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-05
Authors: Jeudy, S., Lartigue, A., Claverie, J.M., Abergel, A.
PDB entry 3ddj: Crystal structure of a cbs domain-containing protein in complex with amp (sso3205) from sulfolobus solfataricus at 1.80 A resolution
Classification: AMP-BINDING PROTEIN
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-05
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ddk: Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase
Classification: TRANSFERASE, VIRAL PROTEIN
Source organism: Human coxsackievirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-06-05
Authors: Campagnola, G., Weygandt, M.H., Scoggin, K.E., Peersen, O.B.
PDB entry 3ddl: Crystallographic Structure of Xanthorhodopsin, a Light-Driven Ion Pump with Dual Chromophore
Classification: TRANSPORT PROTEIN
Source organism: Salinibacter ruber
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-05
Authors: Stagno, J., Luecke, H., Schobert, B., Lanyi, J.K., Imasheva, E.S., Wang, J.M., Balashov, S.P.
PDB entry 3ddm: CRYSTAL STRUCTURE OF MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FROM Bordetella bronchiseptica RB50
Classification: LYASE
Source organism: Bordetella bronchiseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-06-05
Authors: Fedorov, A.A., Fedorov, E.V., Toro, R., Gerlt, J.A., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ddn: Crystal structure of hydroxypyruvic acid phosphate bound D-3-phosphoglycerate dehydrogenase in mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-06-05
Authors: Dey, S., Sacchettini, J.C.
PDB entry 3ddo: X-RAY Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with by Phosphate Ion at 1.5A Resolution
Classification: TRANSFERASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-06-06
Authors: Lashkov, A.A., Mikhailov, A.M., Gabdoulkhakov, A.G.
PDB entry 3ddp: Structure of phosphorylated Thr160 CDK2/cyclin A in complex with the inhibitor CR8
Classification: TRANSFERASE/CELL CYCLE
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-06-06
Authors: Echalier, A., Endicott, J.A.
PDB entry 3ddq: Structure of phosphorylated Thr160 CDK2/cyclin A in complex with the inhibitor roscovitine
Classification: TRANSFERASE/CELL CYCLE
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-06
Authors: Echalier, A., Endicott, J.A.
PDB entry 3ddr: Structure of the Serratia marcescens hemophore receptor HasR-Ile671Gly mutant in complex with its hemophore HasA and heme
Classification: MEMBRANE PROTEIN/HEME BINDING PROTEIN
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-06-06
Authors: Krieg, S., Diederichs, K.
PDB entry 3dds: Crystal structure of glycogen phosphorylase complexed with an anthranilimide based inhibitor GSK261
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-06
Authors: Nolte, R.T.
PDB entry 3ddt: Crystal structure of the B2 box from MuRF1 in dimeric state
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-06
Authors: Mayans, O., Mrosek, M.
PDB entry 3ddu: Prolyl Oligopeptidase with GSK552
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2008-06-06
Authors: Madauss, K.P., Reid, R.A., Haffner, C.D., Miller, A.B.
PDB entry 3ddv: The crystal structure of the transcriptional regulator (GntR family) from Enterococcus faecalis V583
Classification: transcription regulator
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-06-06
Authors: Zhang, R., Zhou, M., Bargassa, M., Otwinowski, Z., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ddw: Crystal structure of glycogen phosphorylase complexed with an anthranilimide based inhibitor GSK055
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-06
Authors: Nolte, R.T.
PDB entry 3ddx: HK97 bacteriophage capsid Expansion Intermediate-II model
Classification: VIRUS
Source organism: Bacteriophage HK97
Experimental method: ELECTRON MICROSCOPY
Resolution: 14 Å
Deposited: 2008-06-06
Authors: Lee, K.K., Gan, L., Conway, J.F., Hendrix, R.W., Steven, A.C., Johnson, J.E.
PDB entry 3ddy: Structure of lumazine protein, an optical transponder of luminescent bacteria
Classification: LUMINESCENT PROTEIN
Source organism: Photobacterium leiognathi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-06-07
Authors: Chatwell, L., Illarionova, V., Illarionov, B., Skerra, A., Bacher, A., Fischer, M.
PDB entry 3ddz: Proteinase K by LB nanotemplate method after the first step of high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-06-07
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3de0: Proteinase K by LB nanotemplate method after the second step of high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-07
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3de1: Proteinase K by LB nanotemplate method after the third step of high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-06-07
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3de2: Proteinase K by LB nanotemplate method after the fourth step of high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-06-07
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3de3: Proteinase K by Classical hanging drop method before high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2008-06-08
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3de4: Proteinase K by Classical hanging drop method after the first step of high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-06-08
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3de5: roteinase K by Classical hanging drop method after the second step of high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-06-08
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3de6: Proteinase K by Classical hanging drop method after the third step of high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-06-08
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3de7: Proteinase K by Classical hanging drop method after the fourth step of high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-06-08
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3de8: Crystal Structure of a Dimeric Cytochrome cb562 Assembly Induced by Copper Coordination
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2008-06-08
Authors: Salgado, E.N., Lewis, R.A., Rheingold, A.L., Tezcan, F.A.
PDB entry 3de9: Crystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel Coordination
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2008-06-08
Authors: Salgado, E.N., Lewis, R.A., Rheingold, A.L., Tezcan, F.A.
PDB entry 3dea: Glomerella cingulata PETFP-cutinase complex
Classification: HYDROLASE
Source organism: Glomerella cingulata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-06-09
Authors: Nyon, M.P., Rice, D.W., Berrisford, J.M., Hounslow, A.M., Moir, A.J.G., Huang, H., Nathan, S., Mahadi, N.M., Farah Diba, A.B., Craven, C.J.
PDB entry 3deb: Crystal Structure of apo form (Zinc removed) of the Botulinum Neurotoxin Type C Light Chain
Classification: HYDROLASE
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-06-09
Authors: Rawat, R., Kumaran, D., Swaminathan, S.
PDB entry 3dec: Crystal structure of a glycosyl hydrolases family 2 protein from Bacteroides thetaiotaomicron
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-06-09
Authors: Kumaran, D., Bonanno, J., Romero, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ded: C-terminal domain of Probable hemolysin from Chromobacterium violaceum
Classification: MEMBRANE PROTEIN
Source organism: Chromobacterium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2008-06-09
Authors: Chang, C., Xu, X., Cui, H., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3dee: CRYSTAL STRUCTURE OF A PUTATIVE REGULATORY PROTEIN INVOLVED IN TRANSCRIPTION (NGO1945) FROM NEISSERIA GONORRHOEAE FA 1090 AT 2.25 A RESOLUTION
Classification: TRANSCRIPTION
Source organism: Neisseria gonorrhoeae FA 1090
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-06-09
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3def: Crystal structure of Toc33 from Arabidopsis thaliana, dimerization deficient mutant R130A
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2008-06-10
Authors: Koenig, P., Schleiff, E., Sinning, I., Tews, I.
PDB entry 3deg: Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNP
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 10.9 Å
Deposited: 2008-06-10
Authors: Connell, S.R., Topf, M., Qin, Y., Wilson, D.N., Mielke, T., Fucini, P., Nierhaus, K.H., Spahn, C.M.T.
PDB entry 3deh: Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors
Classification: Hydrolase, Apoptosis
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-06-10
Authors: Wu, J., Du, J., Li, J., Ding, J.
PDB entry 3dei: Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors
Classification: Hydrolase, Apoptosis
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-06-10
Authors: Wu, J., Du, J., Li, J., Ding, J.
PDB entry 3dej: Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors
Classification: Hydrolase, Apoptosis
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-06-10
Authors: Wu, J., Du, J., Li, J., Ding, J.
PDB entry 3dek: Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors
Classification: Hydrolase, Apoptosis
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-06-10
Authors: Wu, J., Du, J., Li, J., Ding, J.
PDB entry 3del: The structure of CT381, the arginine binding protein from the periplasm Chlamydia trachomatis
Classification: PROTEIN BINDING, TRANSPORT PROTEIN
Source organism: Chlamydia trachomatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2008-06-10
Authors: Petit, P., Vuillard, L., Spinelli, S.
PDB entry 3dem: CUB1-EGF-CUB2 domain of HUMAN MASP-1/3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-06-10
Authors: Gaboriaud, C.
PDB entry 3den: Structure of E. coli DHDPS mutant Y107W
Classification: LYASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-06-10
Authors: Pearce, F.G., Gerrard, J.A., Perugini, M.A., Jameson, G.B.
PDB entry 3deo: Structural basis for specific substrate recognition by the chloroplast signal recognition particle protein cpSRP43
Classification: PROTEIN TRANSPORT, MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-06-10
Authors: Stengel, K.F., Wild, K., Sinning, I.
PDB entry 3dep: Structural basis for specific substrate recognition by the chloroplast signal recognition particle protein cpSRP43
Classification: PROTEIN TRANSPORT, MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-06-10
Authors: Holdermann, I., Stengel, K.F., Wild, K., Sinning, I.
PDB entry 3deq: Crystal structure of dipeptide epimerase from Thermotoga maritima complexed with L-Ala-L-Leu dipeptide
Classification: ISOMERASE
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-06-10
Authors: Fedorov, A.A., Fedorov, E.V., Imker, H.J., Gerlt, J.A., Almo, S.C.
PDB entry 3der: Crystal structure of dipeptide epimerase from Thermotoga maritima complexed with L-Ala-L-Lys dipeptide
Classification: ISOMERASE
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-10
Authors: Fedorov, A.A., Fedorov, E.V., Imker, H.J., Gerlt, J.A., Almo, S.C.
PDB entry 3des: Crystal structure of dipeptide epimerase from Thermotoga maritima complexed with L-Ala-L-Phe dipeptide
Classification: ISOMERASE
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-06-10
Authors: Fedorov, A.A., Fedorov, E.V., Imker, H.J., Gerlt, J.A., Almo, S.C.
PDB entry 3det: Structure of the E148A, Y445A doubly ungated mutant of E.coli CLC_Ec1, Cl-/H+ antiporter
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-06-10
Authors: Jayaram, H., Accardi, A., Wu, F., Williams, C., Miller, C.
PDB entry 3deu: Crystal structure of transcription regulatory protein slyA from Salmonella typhimurium in complex with salicylate ligands
Classification: TRANSCRIPTION REGULATOR
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-06-10
Authors: Le Trong, I., Brzovic, P.S., Fang, F.C., Libby, S.J., Stenkamp, R.E.
PDB entry 3dev: Crystal structure of SH1221 protein from Staphylococcus haemolyticus, Northeast Structural Genomics Consortium Target ShR87
Classification: structural genomics, unknown function
Source organism: Staphylococcus haemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-06-10
Authors: Forouhar, F., Neely, H., Seetharaman, J., Mao, L., Xiao, R., Ciccosanti, C., Foote, E.L., Wang, D., Everett, J.K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3dew: The structure of a putative TetR family transcriptional regulator from Geobacter sulfurreducens PCA.
Classification: transcription regulator
Source organism: Geobacter sulfurreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-06-10
Authors: Cuff, M.E., Bigelow, L., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3dex: Crystal structure of SAV_2001 protein from Streptomyces avermitilis, Northeast Structural Genomics Consortium Target SvR107.
Classification: structural genomics, unknown function
Source organism: Streptomyces avermitilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-06-10
Authors: Forouhar, F., Neely, H., Seetharaman, J., Janjua, H., Fang, Y., Xiao, R., Cunningham, K., Ma, L.-C., Owen, L.A., Chen, C.X., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3dey: Crystal structure of 17beta-HSD1 with DHT in normal and reverse orientation.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-06-10
Authors: Mazumdar, M.
PDB entry 3dez: Crystal structure of Orotate phosphoribosyltransferase from Streptococcus mutans
Classification: TRANSFERASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-06-11
Authors: Liu, C.P., Gao, Z.Q., Hou, H.F., Li, L.F., Su, X.D., Dong, Y.H.
PDB entry 3df0: Calcium-dependent complex between m-calpain and calpastatin
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-06-11
Authors: Moldoveanu, T., Gehring, K., Green, D.R.
PDB entry 3df6: The thermo- and acido-stable ORF-99 from the archaeal virus AFV1
Classification: VIRAL PROTEIN, UNKNOWN FUNCTION
Source organism: Acidianus Filamentous Virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-06-11
Authors: Goulet, A., Spinelli, S., Prangishvili, D., van Tilbeurgh, H., Cambillau, C., Campanacci, V.
PDB entry 3df7: Crystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidus
Classification: structural genomics, unknown function
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2008-06-11
Authors: Sugadev, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)