LiteFold/PDB huggingface dataset:
PDB entry 5dvo: Fc K392D/K409D homodimer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-21
Authors: Atwell, S., Leaver-Fay, A., Froning, K.J., Aldaz, H., Pustilnik, A., Lu, F., Huang, F., Yuan, R., Dhanani, S.H., Chamberlain, A.K., Fitchett, J.R., Gutierrez, B., Hendle, J., Demarest, S.J., Kuhlman, B.
PDB entry 5dvp: Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with Doripenem adduct
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2015-09-21
Authors: Kumar, P., Lamichhane, G.
PDB entry 5dvr: Crystal Structure of TgCDPK1 From Toxoplasma Gondii complexed with GW780159X
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-21
Authors: Jiang, D.Q., Tempel, W., Loppnau, P., Graslund, S., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Hui, R., Lovato, D.V., Osman, K.T., Structural Genomics Consortium (SGC)
PDB entry 5dvs: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with a 2-Methyl-substituted Triaryl-imine 4,4'-[(2-methylphenyl)carbonimidoyl]diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2015-09-21
Authors: Nwachukwu, J.C., Wright, N.J., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dvv: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with a Triaryl-imine analog 4,4'-(phenylcarbonimidoyl)diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.505 Å
Deposited: 2015-09-21
Authors: Nwachukwu, J.C., Wright, N.J., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dvw: Structure of minor nucleoprotein V30 from Zaire ebolavirus
Classification: VIRAL PROTEIN
Source organism: Zaire ebolavirus (strain Mayinga-76)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2015-09-21
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5dvx: Crystal structure of the catalytic-domain of human carbonic anhydrase IX at 1.6 angstrom resolution
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.598 Å
Deposited: 2015-09-21
Authors: Mahon, B.P., Socorro, L., Driscoll, J.M., McKenna, R.
PDB entry 5dvy: 2.95 Angstrom Crystal Structure of the Dimeric Form of Penicillin Binding Protein 2 Prime from Enterococcus faecium
Classification: PENICILLIN-BINDING PROTEIN
Source organism: Enterococcus faecium DO
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2015-09-21
Authors: Minasov, G., Wawrzak, Z., Shuvalova, L., Dubrovska, I., Flores, K., Filippova, E., Grimshaw, S., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5dvz: Holo TrpB from Pyrococcus furiosus
Classification: LYASE
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2015-09-21
Authors: Buller, A.R., Arnold, F.H.
PDB entry 5dw0: TrpB from Pyrococcus furiosus with L-serine bound as the external aldimine
Classification: LYASE
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2015-09-22
Authors: Buller, A.R., Arnold, F.H.
PDB entry 5dw1: X-ray crystal structure of human BRD2(BD2) in complex with RVX297 to 1.55 A resolution
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2015-09-22
Authors: White, A., Fontano, E., Suto, R.K.
PDB entry 5dw2: X-ray crystal structure of human BRD4(BD1) in complex with RVX297 to 1.12 A resolution
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2015-09-22
Authors: White, A., Fontano, E., Suto, R.K.
PDB entry 5dw3: Tryptophan Synthase beta-subunit from Pyrococcus furiosus with product L-tryptophan non-covalently bound in the active site
Classification: LYASE
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2015-09-22
Authors: Buller, A.R., Arnold, F.H.
PDB entry 5dw4: Succinyl-CoA:acetate CoA-transferase (AarCH6) bound to acetate
Classification: TRANSFERASE
Source organism: Acetobacter aceti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.622 Å
Deposited: 2015-09-22
Authors: Murphy, J.R., Kappock, T.J.
PDB entry 5dw5: Succinyl-CoA:acetate CoA-transferase (AarCH6) bound to the CoA analogue 3'-phosphoadenosine 5'-(O-(N-propylpantothenamide))pyrophosphate (MX)
Classification: TRANSFERASE
Source organism: Acetobacter aceti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.656 Å
Deposited: 2015-09-22
Authors: Kappock, T.J., Murphy, J.R.
PDB entry 5dw6: Succinyl-CoA:acetate CoA-transferase (AarCH6) bound to acetate and the CoA analogue 3'-phosphoadenosine 5'-(O-(N-propyl-R-pantothenamide))pyrophosphate (MX)
Classification: TRANSFERASE
Source organism: Acetobacter aceti 1023
Experimental method: X-RAY DIFFRACTION
Resolution: 1.548 Å
Deposited: 2015-09-22
Authors: Kappock, T.J., Murphy, J.R.
PDB entry 5dw7: Crystal structure of the unliganded geosmin synthase N-terminal domain from Streptomyces coelicolor
Classification: LYASE
Source organism: Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.202 Å
Deposited: 2015-09-22
Authors: Lombardi, P.M., Harris, G.G., Pemberton, T.A., Matsui, T., Weiss, T.M., Cole, K.E., Koksal, M., Murphy, F.V., Vedula, L.S., Chou, W.K., Cane, D.E., Christianson, D.W.
PDB entry 5dw8: Crystal structure of 2'AMP bound SaIMPase-II
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-22
Authors: Dutta, A., Bhattacharyya, S., Das, A.K.
PDB entry 5dwa: Crystal structure of pre-specific restriction endonuclease AgeI-DNA complex
Classification: HYDROLASE
Source organism: Thalassobius gelatinovorus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-09-22
Authors: Tamulaitiene, G., Jovaisaite, V., Grazulis, S., Siksnys, V.
PDB entry 5dwb: Crystal structure of specific restriction endonuclease AgeI-DNA complex
Classification: HYDROLASE
Source organism: Thalassobius gelatinovorus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-22
Authors: Tamulaitiene, G., Jovaisaite, V., Grazulis, S., Siksnys, V.
PDB entry 5dwc: Crystal structure of restriction endonuclease AgeI
Classification: HYDROLASE
Source organism: Thalassobius gelatinovorus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-22
Authors: Tamulaitiene, G., Ramonaite, I., Grazulis, S., Siksnys, V.
PDB entry 5dwd: Crystal structure of esterase PE8
Classification: HYDROLASE
Source organism: Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2015-09-22
Authors: Li, J., Huang, J.
PDB entry 5dwe: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with a 2-Chloro-substituted Triaryl-imine analog 4,4'-[(2-chlorophenyl)carbonimidoyl]diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2015-09-22
Authors: Nwachukwu, J.C., Wright, N.J., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dwf: Crystal structure of the complex of Peptidoglycan recognition protein, PGRP-S from camel with ethylene glycol at 1.83 A resolution
Classification: IMMUNE SYSTEM
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2015-09-22
Authors: Singh, P.K., Yadav, S.P., Sharma, P., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 5dwg: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Triaryl-substituted Imine Analog, 4-{(E)-(4-hydroxyphenyl)[(2-methylphenyl)imino]methyl}benzene-1,3-diol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-22
Authors: Nwachukwu, J.C., Wright, N.J., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dwi: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with a Resorcinyl 2-Chloro-substituted Diaryl-imine analog 4-[(E)-[(2-chlorophenyl)imino](4-hydroxyphenyl)methyl]benzene-1,3-diol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2015-09-22
Authors: Nwachukwu, J.C., Wright, N.J., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dwj: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with a Resorcinyl 4-Fluoro-substituted Diaryl-imine analog 4-[(E)-[(4-fluorophenyl)imino](4-hydroxyphenyl)methyl]benzene-1,3-diol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2015-09-22
Authors: Nwachukwu, J.C., Wright, N.J., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dwk: Diacylglycerol Kinase solved by multi crystal multi orientation native SAD
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2015-09-22
Authors: Weinert, T., Olieric, V., Finke, A.D., Li, D., Caffrey, M., Wang, M.
PDB entry 5dwl: Human PPARgamma ligand binding dmain in complex with SR1664
Classification: TRANSCRIPTION/TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-09-22
Authors: Jang, J.Y.
PDB entry 5dwm: Crystal structure of Phosphinothricin N-acetyltransferase from Brucella ovis
Classification: TRANSFERASE
Source organism: Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2015-09-22
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5dwn: Crystal structure of Phosphinothricin N-acetyltransferase from Brucella ovis in complex with AcetylCoA <structure_details =
Classification: TRANSFERASE
Source organism: Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-09-22
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5dwp: Crystal Structure of human transthyretin (TTR) processed with the CrystalDirect automated mounting and cryo-cooling technology
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2015-09-22
Authors: Zander, U., Cornaciu, I., Forsyth, T., Yee, A., Marquez, J.A.
PDB entry 5dwq: Crystal structure of CARM1, sinefungin, and methylated H3 peptide (R17)
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2015-09-22
Authors: Boriack-Sjodin, P.A.
PDB entry 5dwr: Identification of N-(4-((1R,3S,5S)-3-amino-5-methylcyclohexyl)pyridin-3-yl)-6-(2,6-difluorophenyl)-5-fluoropicolinamide (PIM447), a Potent and Selective Proviral Insertion Site of Moloney Murine Leukemia (PIM) 1,2 and 3 Kinase Inhibitor in Clinical Trials for Hematological Malignancies
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-09-22
Authors: Bellamacina, C., Bussiere, D., Burger, M.
PDB entry 5dws: Crystal Structure of ITCH WW3 domain in complex with TXNIP peptide
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-09-22
Authors: Liu, Y., Tempel, W., Dong, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 5dwu: Beta common receptor in complex with a Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.97 Å
Deposited: 2015-09-23
Authors: Dhagat, U., Parker, M.W.
PDB entry 5dwv: Crystal structure of the Luciferase complexed with substrate analogue
Classification: OXIDOREDUCTASE
Source organism: Photinus pyralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-23
Authors: Su, J., Li, Z., Yuan, Z., Gu, L.
PDB entry 5dww: Structural Insights into the Quadruplex-Duplex 3' Interface formed from a Telomeric Repeat - TTLOOP
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2015-09-23
Authors: Russo Krauss, I., Parkinson, G.N.
PDB entry 5dwx: Structural Insights into the Quadruplex-Duplex 3' Interface formed from a Telomeric Repeat - TLOOP
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2015-09-23
Authors: Parkinson, G.N., Russo Krauss, I.
PDB entry 5dwy: Crystal structure of a substrate-free glutamate transporter homologue GltTk
Classification: MEMBRANE PROTEIN
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-09-23
Authors: Guskov, A., Slotboom, D.J.
PDB entry 5dwz: Structural and functional characterization of PqsBC, a condensing enzyme in the biosynthesis of the Pseudomonas aeruginosa quinolone signal
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2015-09-23
Authors: Drees, S.L., Li, C., Prasetya, F., Saleem, M., Dreveny, I., Hennecke, U., Williams, P., Emsley, J., Fetzner, S.
PDB entry 5dx0: Crystal structure of CARM1, sinefungin, and H3 peptide (R17)
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-09-23
Authors: Boriack-Sjodin, P.A.
PDB entry 5dx1: Crystal structure of CARM1, sinefungin, and PABP1 peptide (R455)
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2015-09-23
Authors: Boriack-Sjodin, P.A.
PDB entry 5dx3: Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with Stapled Peptide SRC2-P3 and Estradiol
Classification: Hormone receptor/peptide
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.0903 Å
Deposited: 2015-09-23
Authors: Speltz, T.E., Fanning, S.W., Mayne, C.G., Tajkhorshid, E., Greene, G.L., Moore, T.W.
PDB entry 5dx4: Crystal Structure of the first bromodomain of human BRD4 in complex with benzo[cd]indol-2(1H)-one ligand
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-23
Authors: Zhang, Y., Song, M., Liu, Z., Xue, X., Xu, Y.
PDB entry 5dx5: Crystal structure of methionine gamma-lyase from Clostridium sporogenes
Classification: LYASE
Source organism: Clostridium sporogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2015-09-23
Authors: Revtovich, S.V., Nikulin, A.D., Morozova, E.A., Anufrieva, N.V., Demidkina, T.V.
PDB entry 5dx6: Acetolactate Synthase from Klebsiella pneumoniae soaked with beta-fluoropyruvate
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2015-09-23
Authors: Latta, A.J., McLeish, M.J., Andrews, F.H.
PDB entry 5dx7: Crystal structure of Mycobacterium tuberculosis malate synthase in complex with 5-(5-chlorothiophen-2-yl)isoxazole-3-carboxylic acid
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-09-23
Authors: Huang, H.-L., Sacchettini, J.C.
PDB entry 5dx8: Crystal structure of CARM1, sinefungin, and methylated PABP1 peptide (R455)
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-09-23
Authors: Boriack-Sjodin, P.A.
PDB entry 5dx9: Structure of trehalose-6-phosphate phosphatase from Cryptococcus neoformans
Classification: HYDROLASE
Source organism: Cryptococcus neoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-09-23
Authors: Miao, Y., Brennan, R.G.
PDB entry 5dxa: Crystal structure of CARM1, sinefungin, and methylated PABP1 peptide (R460)
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2015-09-23
Authors: Boriack-Sjodin, P.A.
PDB entry 5dxb: Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with Stapled Peptide SRC2-P1 and Estradiol
Classification: Hormone receptor/peptide
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2015-09-23
Authors: Fanning, S.W., Speltz, T.E., Mayne, C.G., Tajkhorshid, E., Greene, G.L., Moore, T.W.
PDB entry 5dxd: Crystal structure of Putative beta-glucanase (Rv0315 ortholog) from Mycobacterium abscessus
Classification: HYDROLASE
Source organism: Mycobacterium abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-09-23
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5dxe: Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with Stapled Peptide SRC2-P4 and Estradiol
Classification: Hormone receptor/peptide
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-09-23
Authors: Fanning, S.W., Speltz, T.E., Mayne, C.G., Tajkhorshid, E., Greene, G.L., Moore, T.W.
PDB entry 5dxf: Structure of Candida albicans trehalose-6-phosphate phosphatase N-terminal domain
Classification: HYDROLASE
Source organism: Candida albicans (strain SC5314 / ATCC MYA-2876)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.563 Å
Deposited: 2015-09-23
Authors: Miao, Y., Brennan, R.G.
PDB entry 5dxg: Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with Stapled Peptide SRC2-P5
Classification: Hormone Receptor/peptide
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2015-09-23
Authors: Fanning, S.W., Speltz, T.E., Mayne, C.G., Tajkhorshid, E., Greene, G.L., Moore, T.W.
PDB entry 5dxh: p110alpha/p85alpha with compound 5
Classification: Transferase/Transferase Inhibitor
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-09-23
Authors: Heffron, T.P., Heald, R.A., Ndubaku, C., Wei, B.Q., Augustin, M., Do, S., Edgar, K., Eigenbrot, C., Friedman, L., Gancia, E., Jackson, P.S., Jones, G., Kolesnikov, A., Lee, L.B., Lesnick, J.D., Lewis, C., McLean, N., Mortle, M., Nonomiya, J., Pang, J., Price, S., Prior, W.W., Salphati, L., Sideris, S., Staben, S., Steinbacher, S., Tsui, V., Wallin, J., Sampath, D., Olivero, A.
PDB entry 5dxi: Structure of C. albicans Trehalose-6-phosphate phosphatase C-terminal domain
Classification: HYDROLASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-09-23
Authors: Miao, Y., Brennan, R.G.
PDB entry 5dxj: Crystal structure of CARM1 and sinefungin
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-09-23
Authors: Boriack-Sjodin, P.A.
PDB entry 5dxk: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-[(9s)-bicyclo[3.3.1]non-9-ylmethanediyl]diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.226 Å
Deposited: 2015-09-23
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dxl: Structure of Aspergillus fumigatus trehalose-6-phosphate phosphatase crystal form 1
Classification: HYDROLASE
Source organism: Neosartorya fumigata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.573 Å
Deposited: 2015-09-23
Authors: Miao, Y., Brennan, R.G.
PDB entry 5dxm: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 3-[(E)-(1s,5s)-bicyclo[3.3.1]non-9-ylidene(4-hydroxyphenyl)methyl]phenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2015-09-23
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dxn: Structure of Aspergillus fumigatus trehalose-6-phosphate phosphatase crystal form 2
Classification: HYDROLASE
Source organism: Neosartorya fumigata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-09-23
Authors: Miao, Y., Brennan, R.G.
PDB entry 5dxo: Structure of Aspergillus fumigatus trehalose-6-phosphate phosphatase crystal form 3
Classification: HYDROLASE
Source organism: Neosartorya fumigata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-09-23
Authors: Miao, Y., Brennan, R.G.
PDB entry 5dxp: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4-[(E)-(1s,5s)-bicyclo[3.3.1]non-9-ylidene(phenyl)methyl]phenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.201 Å
Deposited: 2015-09-23
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dxq: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-[(1s,5s)-bicyclo[3.3.1]non-9-ylidenemethanediyl]diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-23
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dxr: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-{[(3R)-3-methylcyclohexylidene]methanediyl}diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2015-09-23
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dxt: p110alpha with GDC-0326
Classification: Transferase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-09-23
Authors: Heffron, T.P., Heald, R.A., Ndubaku, C., Wei, B.Q., Augustin, M., Do, S., Edgar, K., Eigenbrot, C., Friedman, L., Gancia, E., Jackson, P.S., Jones, G., Kolesnikov, A., Lee, L.B., Lesnick, J.D., Lewis, C., McLean, N., Mortle, M., Nonomiya, J., Pang, J., Price, S., Prior, W.W., Salphati, L., Sideris, S., Staben, S.T., Steinbacher, S., Tsui, V., Wallin, J., Sampath, D., Olivero, A.
PDB entry 5dxu: p110delta/p85alpha with GDC-0326
Classification: Transferase/Inhibitor
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2015-09-23
Authors: Heffron, T.P., Heald, R.A., Ndubaku, C., Wei, B.Q., Augustin, M., Do, S., Edgar, K., Eigenbrot, C., Friedman, L., Gancia, E., Jackson, P.S., Jones, G., Kolesnikov, A., Lee, L.B., Lesnick, J.D., Lewis, C., McLean, N., Mortle, M., Nonomiya, J., Pang, J., Price, S., Prior, W.W., Salphati, L., Sideris, S., Staben, S.T., Steinbacher, S., Tsui, V., Wallin, J., Sampath, D., Olivero, A.
PDB entry 5dxv: Crystal structure of Rethreaded DHFR
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2015-09-24
Authors: Faham, S.
PDB entry 5dxw: Crystal structure of mouse PD-L1 nanobody
Classification: SIGNALING PROTEIN
Source organism: Camelidae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.441 Å
Deposited: 2015-09-24
Authors: Fedorov, A.A., Fedorov, E.V., Samanta, D., Almo, S.C., Ploegh, H., Ingram, J., Dougan, M.
PDB entry 5dxx: Crystal structure of Dbr2
Classification: OXIDOREDUCTASE
Source organism: Artemisia annua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2015-09-24
Authors: Li, L., Chen, T.T., Xu, Y.C.
PDB entry 5dxy: Crystal structure of Dbr2
Classification: OXIDOREDUCTASE
Source organism: Artemisia annua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2015-09-24
Authors: Li, L., Chen, T.T., Xu, Y.C.
PDB entry 5dxz: Crystal of AmtR from Corynebacterium glutamicum
Classification: DNA BINDING PROTEIN
Source organism: Corynebacterium glutamicum ATCC 14067
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-09-24
Authors: Palanca, C., Rubio, V.
PDB entry 5dy0: Crystal of AmtR from Corynebacterium glutamicum in complex with DNA
Classification: DNA BINDING PROTEIN
Source organism: Corynebacterium glutamicum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-09-24
Authors: Palanca, C., Rubio, V.
PDB entry 5dy1: Crystal of Selenomethionine substituted AmtR from Corynebacterium glutamicum
Classification: DNA BINDING PROTEIN
Source organism: Corynebacterium glutamicum ATCC 14067
Experimental method: X-RAY DIFFRACTION
Resolution: 2.651 Å
Deposited: 2015-09-24
Authors: Palanca, C., Rubio, V.
PDB entry 5dy2: Crystal structure of Dbr2 with mutation M27L
Classification: OXIDOREDUCTASE
Source organism: Artemisia annua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2015-09-24
Authors: Li, L., Chen, T.T., Xu, Y.C.
PDB entry 5dy3: Crystal structure of Dbr2
Classification: OXIDOREDUCTASE
Source organism: Artemisia annua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2015-09-24
Authors: Li, L., Chen, T.T., Xu, Y.C.
PDB entry 5dy4: Crystal structure of human Sirt2 in complex with a brominated 2nd generation SirReal inhibitor and NAD+
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2015-09-24
Authors: Rumpf, T., Gerhardt, S., Einsle, O., Jung, M.
PDB entry 5dy5: Crystal structure of human Sirt2 in complex with a SirReal probe fragment
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-09-24
Authors: Rumpf, T., Gerhardt, S., Einsle, O., Jung, M.
PDB entry 5dy6: Enhanced superfolder GFP with DBCO at 148
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2015-09-24
Authors: Jones, D.D., Rizkallah, P.J., Worthy, H.L.
PDB entry 5dy7: Crystal structure of the human BRPF1 bromodomain in complex with SEED4
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2015-09-24
Authors: Zhu, J., Caflisch, A.
PDB entry 5dy8: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-{[(3S)-3-ethylcyclohexylidene]methanediyl}diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.031 Å
Deposited: 2015-09-24
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dy9: Y68T Hfq from Methanococcus jannaschii in complex with AMP
Classification: RNA BINDING PROTEIN
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-09-24
Authors: Nikulin, A.D., Mikhailina, A.O., Lekontseva, N.V., Balobanov, V.A., Nikonova, E.Y., Tishchenko, S.V.
PDB entry 5dya: Crystal structure of the human BRPF1 bromodomain in complex with SEED5
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-09-24
Authors: Zhu, J., Caflisch, A.
PDB entry 5dyb: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-(3,4-dihydronaphthalen-2(1H)-ylidenemethanediyl)diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2015-09-24
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dyc: Crystal structure of the human BRPF1 bromodomain in complex with SEED6
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-09-24
Authors: Zhu, J., Caflisch, A.
PDB entry 5dyd: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-{[(3S)-3-(methylsulfanyl)cyclohexylidene]methanediyl}diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.485 Å
Deposited: 2015-09-24
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dye: CRYSTAL STRUCTURE OF THE FULL LENGTH S156E MUTANT OF HUMAN AQUAPORIN 5
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2015-09-24
Authors: Kitchen, P., Oeberg, F., Sjoehamn, J., Hedfalk, K., Bill, R.M., Conner, A.C., Conner, M.T., Toernroth-Horsefield, S.
PDB entry 5dyf: The crystal structure of Aminopeptidase N in complex with N-benzyl-1,2-diaminoethylphosphonic acid
Classification: hydrolase/hydrolase inhibitor
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.854 Å
Deposited: 2015-09-24
Authors: Nocek, B., Joachimiak, A., Vassiliou, S., Berlicki, L., Mucha, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 5dyg: Structure of p97 N-D1 L198W mutant in complex with ADP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-09-24
Authors: Tang, W.K., Xia, D.
PDB entry 5dyh: Ti(IV) bound human serum transferrin
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.682 Å
Deposited: 2015-09-24
Authors: Saxena, M., Sharma, S., Noinaj, N., Parks, T.B., Tinoco, A.D.
PDB entry 5dyi: Structure of p97 N-D1 wild-type in complex with ADP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.71 Å
Deposited: 2015-09-24
Authors: Tang, W.K., Xia, D.
PDB entry 5dyj: Mysosin heavy chain kinase A catalytic domain mutant - D663A
Classification: TRANSFERASE
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-24
Authors: van Staalduinen, L.M., Yang, Y., Jia, Z.
PDB entry 5dyk: Crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium falciparum - Apo form
Classification: TRANSFERASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2015-09-24
Authors: Wernimont, A.K., Tempel, W., He, H., Seitova, A., Hills, T., Neculai, A.M., Baker, D.A., Flueck, C., Kettleborough, C.A., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Hui, R., Hutchinson, A., El Bakkouri, M., Structural Genomics Consortium (SGC)
PDB entry 5dyl: Crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium Vivax - Apo form
Classification: TRANSFERASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-24
Authors: Wernimont, A.K., Tempel, W., He, H., Seitova, A., Hills, T., Neculai, A.M., Baker, D.A., Flueck, C., Kettleborough, C.A., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Hui, R., Hutchinson, A., El Bakkouri, M., Structural Genomics Consortium (SGC)
PDB entry 5dym: Crystal structure of a PadR family transcription regulator from hypervirulent Clostridium difficile R20291 - CdPadR_0991 to 1.89 Angstrom resolution
Classification: DNA BINDING PROTEIN
Source organism: Peptoclostridium difficile (strain R20291)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.894 Å
Deposited: 2015-09-24
Authors: Isom, C.E., Karr, E.A., Menon, S.K., West, A.H., Richter-Addo, G.B.
PDB entry 5dyn: B. fragilis cysteine protease
Classification: HYDROLASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2015-09-24
Authors: Choi, V.M., Herrou, J., Hecht, A.L., Turner, J.R., Crosson, S., Bubeck Wardenburg, J.
PDB entry 5dyo: Fab43.1 complex with flourescein
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2015-09-25
Authors: Longenecker, K.L., Judge, R.A.
PDB entry 5dyp: Crystal structure of Asp251Gly/Gln307His mutant of cytochrome P450 BM3
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-09-25
Authors: Di Nardo, G., Dell'Angelo, V., Gilardi, G.
PDB entry 5dyq: AbyU L73M L139M
Classification: LIGASE
Source organism: Verrucosispora maris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2015-09-25
Authors: Byrne, M.J., Race, P.R.
PDB entry 5dyr: Structure of virulence-associated protein D (VapD) from Xylella fastidiosa
Classification: DNA BINDING PROTEIN
Source organism: Xylella fastidiosa (strain 9a5c)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-09-25
Authors: Kochneva, M.V., dos Santos, M.L., dos Santos, C.A., de Souza, A.P., Polikarpov, I., Aparicio, R., Golubev, A.M.
PDB entry 5dys: Crystal Structure of T94I rhodopsin mutant
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-25
Authors: Singhal, A., Guo, Y., Matkovic, M., Schertler, G., Deupi, X., Yan, E., Standfuss, J.
PDB entry 5dyt: Crystal structure of human butyrylcholinesterase in complex with N-((1-benzylpiperidin-3-yl)methyl)-N-methylnaphthalene-2-sulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2015-09-25
Authors: Coquelle, N., Brus, B., Colletier, J.P.
PDB entry 5dyu: Crystal Structure of BAZ2B bromodomain in complex with fragment F39
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-09-25
Authors: Lolli, G., Caflisch, A.
PDB entry 5dyv: AbyU - wildtype
Classification: LIGASE
Source organism: Verrucosispora maris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-25
Authors: Race, P.R., Byrne, M.J.
PDB entry 5dyw: Crystal structure of human butyrylcholinesterase in complex with N-((1-benzylpiperidin-3-yl)methyl)-N-(2-methoxyethyl)naphthalene-2-sulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-25
Authors: Coquelle, N., Brus, B., Colletier, J.P.
PDB entry 5dyx: Crystal Structure of BAZ2B bromodomain in complex with fragment F59
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-09-25
Authors: Lolli, G., Caflisch, A.
PDB entry 5dyy: Crystal structure of human butyrylcholinesterase in complex with N-((1-benzylpiperidin-3-yl)methyl)naphthalene-2-sulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-09-25
Authors: Coquelle, N., Brus, B., Colletier, J.P.
PDB entry 5dyz: Crystal structure of Asp251Gly/Gln307His mutant of cytochrome P450 BM3 in complex with N-palmitoylglycine
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.967 Å
Deposited: 2015-09-25
Authors: Di Nardo, G., Dell'Angelo, V., Gilardi, G.
PDB entry 5dz0: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-[(4-methylcyclohexylidene)methanediyl]diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2015-09-25
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dz1: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-[(4-ethylcyclohexylidene)methanediyl]diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-09-25
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dz2: Geosmin synthase from Streptomyces coelicolor N-terminal domain complexed with three Mg2+ ions and alendronic acid
Classification: LYASE
Source organism: Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.111 Å
Deposited: 2015-09-25
Authors: Harris, G.G., Lombardi, P.M., Pemberton, T.A., Matsui, T., Weiss, T.M., Cole, K.E., Koksal, M., Murphy, F.V., Vedula, L.S., Chou, W.K.W., Cane, D.E., Christianson, D.W.
PDB entry 5dz3: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-{[4-(fluoromethyl)cyclohexylidene]methanediyl}diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-09-25
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dz5: Crystal structure of Dendroaspis polylepis mambalgin-1 wild-type in P41212 space group
Classification: TOXIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-09-25
Authors: Stura, E.A., Tepshi, L., Mourier, G., Kessler, P., Servent, D.
PDB entry 5dz6: Acyl transferase from Bacillaene PKS
Classification: TRANSFERASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2015-09-25
Authors: Till, M., Race, P.R.
PDB entry 5dz7: STRUCTURAL BASIS OF ACYL TRANSFER IN A TRANS-AT POLYKETIDE SYNTHASE
Classification: TRANSFERASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-09-25
Authors: Race, P.R., Till, M.
PDB entry 5dz8: Streptococcus agalactiae AgI/II polypeptide BspA variable (V) domain
Classification: CELL ADHESION
Source organism: Streptococcus agalactiae serotype III (strain NEM316)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2015-09-25
Authors: Rego, S., Till, M., Race, P.R.
PDB entry 5dz9: Streptococcus agalactiae AgI/II polypeptide BspA C-terminal domain (Mut)
Classification: CELL ADHESION
Source organism: Streptococcus agalactiae serotype III (strain NEM316)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2015-09-25
Authors: Rego, S., Till, M., Race, P.R.
PDB entry 5dza: Streptococcus agalactiae AgI/II polypeptide BspA C terminal domain (WT)
Classification: CELL ADHESION
Source organism: Streptococcus agalactiae serotype III (strain NEM316)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2015-09-25
Authors: Rego, S., Till, M., Race, P.R.
PDB entry 5dzb: 6beta1
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.33 Å
Deposited: 2015-09-25
Authors: Kabasakal, B.V., MacDonald, J.T., Murray, W.W.
PDB entry 5dzc: Crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium Vivax - AMPPNP bound
Classification: TRANSFERASE
Source organism: Plasmodium vivax (strain Salvador I)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-25
Authors: Walker, J.R., El Bakkouri, M., Loppnau, P., Graslund, S., He, H., Seitova, A., Hutchinson, A., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Hui, R., Amani, M., Structural Genomics Consortium (SGC)
PDB entry 5dzd: Crystal Structure of WW4 domain of ITCH in complex with TXNIP peptide
Classification: LIGASE/PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2015-09-25
Authors: Liu, Y., Tempel, W., Dong, A., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 5dze: Crystal Structure of the catalytic nucleophile mutant of VvEG16 in complex with cellotetraose
Classification: HYDROLASE
Source organism: Vitis vinifera
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2015-09-25
Authors: McGregor, N.G.S., Tung, C.C., Van Petegem, F., Brumer, H.
PDB entry 5dzf: Crystal Structure of the catalytic nucleophile mutant of VvEG16 in complex with a mixed-linkage glucan octasaccharide
Classification: HYDROLASE
Source organism: Vitis vinifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-09-25
Authors: McGregor, N.G.S., Tung, C.C., Van Petegem, F., Brumer, H.
PDB entry 5dzg: Crystal Structure of the catalytic nucleophile mutant of VvEG16 in complex with a xyloglucan tetradecasaccharide
Classification: HYDROLASE
Source organism: Vitis vinifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2015-09-25
Authors: McGregor, N.G.S., Tung, C.C., Van Petegem, F., Brumer, H.
PDB entry 5dzh: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-{[4-(2-hydroxyethyl)cyclohexylidene]methanediyl}diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2015-09-25
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dzi: Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4,4'-{[(3S)-3-(2-hydroxyethyl)cyclohexylidene]methanediyl}diphenol
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-09-25
Authors: Nwachukwu, J.C., Srinivasan, S., Zheng, Y., Wang, S., Min, J., Dong, C., Liao, Z., Cavett, V., Nowak, J., Houtman, R., Carlson, K.E., Josan, J.S., Elemento, O., Katzenellenbogen, J.A., Zhou, H.B., Nettles, K.W.
PDB entry 5dzj: Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T206 in conformation A
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.095 Å
Deposited: 2015-09-25
Authors: Kumar, P., Ginell, S.L., Lamichhane, G.
PDB entry 5dzk: Crystal structure of the active form of the proteolytic complex clpP1 and clpP2
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2015-09-25
Authors: LI, M., Wlodawer, A., Maurizi, M.
PDB entry 5dzl: Crystal structure of the protein human CEACAM1
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4006 Å
Deposited: 2015-09-25
Authors: Huang, Y.H., Russell, A., Gandhi, A.K., Kondo, Y., Chen, Q., Petsko, G.A., Blumberg, R.S.
PDB entry 5dzm: HIV-1 Reverse Transcriptase RH domain
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-09-25
Authors: Pedersen, L.C., London, R.E., Gabel, S.A., Zheng, X.H.
PDB entry 5dzn: human T-cell immunoglobulin and mucin domain protein 4
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-09-25
Authors: Yuan, S., Rao, Z., Wang, X.
PDB entry 5dzo: Crystal structure of human T-cell immunoglobulin and mucin domain protein 1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.301 Å
Deposited: 2015-09-25
Authors: Yuan, S., Rao, Z., Wang, X.
PDB entry 5dzp: Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T206 in conformation B
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2015-09-25
Authors: Kumar, P., Ginell, S.L., Lamichhane, G.
PDB entry 5dzq: C3larvin toxin, an ADP-ribosyltransferase from Paenibacillus larvae, Orthorhombic Form
Classification: TRANSFERASE
Source organism: Paenibacillus larvae subsp. larvae BRL-230010
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2015-09-26
Authors: Dutta, D., Ravulapalli, R., Merrill, A.R.
PDB entry 5dzr: Structure of RNA Helicase FRH a Critical Component of the Neurospora Crassa Circadian Clock
Classification: HYDROLASE
Source organism: Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.161 Å
Deposited: 2015-09-26
Authors: Conrad, K.S., Crane, B.C.