LiteFold/PDB huggingface dataset:
PDB entry 9ejj: Bruton's tyrosine kinase in complex with compound PTI55
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2024-11-28
Authors: Lin, D.Y., Andreotti, A.H., Tonge, P.J., Bravo, E., Li, X.
PDB entry 9ejk: Lgl2 bound to the aPKCiota-Par6b complex in nucleotide-free form. Head sub-complex region subtracted
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2024-11-28
Authors: Almagor, L., Weis, W.I.
PDB entry 9ejl: Lgl2 bound to the aPKCiota-Par6B complex in nucleotide-free form. Conformation with visible head sub-complex.
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2024-11-28
Authors: Almagor, L., Weis, W.I.
PDB entry 9ejm: Lgl2 bound to the aPKCiota-Par6B complex in its ADP-bound form
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2024-11-28
Authors: Almagor, L., Weis, W.I.
PDB entry 9ejn: Crystal structure of magnesium-transporting ATPase MgtA in an E1-like magnesium-bound state
Classification: METAL TRANSPORT
Source organism: Lactococcus lactis subsp. lactis CV56
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2024-11-28
Authors: Khan, M.B., Primeau, J.O., Basu, P.C., Morth, J.P., Lemieux, M.J., Young, H.S.
PDB entry 9ejo: Crystal structure of WDR91 in complex with XS381295
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-11-28
Authors: Zeng, H., Ahmad, H., Wang, X., Sun, J., Dong, A., Seitova, A., Arrowsmith, C.H., Edwards, A.M., Peng, H., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 9ejp: Crystal structure of WDR91 in complex with XS838489
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2024-11-28
Authors: Zeng, H., Ahmad, H., Wang, X., Sun, J., Dong, A., Seitova, A., Arrowsmith, C.H., Edwards, A.M., Peng, H., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 9ejq: Crystal structure of DDB1 in complex with XS381952
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2024-11-28
Authors: Zeng, H., Ahmad, H., Wang, X., Sun, J., Dong, A., Seitova, A., Arrowsmith, C.H., Edwards, A.M., Peng, H., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 9ejr: Bruton's tyrosine kinase in complex with compound PTI52
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-11-28
Authors: Lin, D.Y., Andreotti, A.H., Tonge, P.J., Bravo, E., Li, X.
PDB entry 9ejs: Bruton's tyrosine kinase with mutations in the activation loop in complex with compound PTI52
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-11-28
Authors: Lin, D.Y., Andreotti, A.H., Tonge, P.J., Bravo, E., Li, X.
PDB entry 9eju: Co-MAHF-9 A8N Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2024-11-29
Authors: Richardson-Matthews, R.M.
PDB entry 9ejv: Co-MAHF-9 A8R Metal Alpha-Helix Framework
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.92 Å
Deposited: 2024-11-29
Authors: Richardson-Matthews, R.M.
PDB entry 9ejw: MCMV immunoevasin m11 binding murine CD44
Classification: VIRAL PROTEIN
Source organism: Murid betaherpesvirus 1; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-11-29
Authors: Deuss, F.A., Rossjohn, J., Sng, X.Y.X., Voigt, V., Schuster, I.S., Fleming, P., Abuwarwar, M., van Dommelen, S., Neate, G., Horsnell, H.L., Golzarroshan, B., Varelias, A., Hill, G.R., Lyman, S.D., Mueller, S.N., Scalzo, A.A., Wikstrom, M.E., Berry, R., Fletcher, A.L., Andoniou, C.E., Degli-Esposti, M.A.
PDB entry 9ejx: Bruton's tyrosine kinase with mutations in the activation loop in complex with compound PTI42
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2024-11-29
Authors: Lin, D.Y., Andreotti, A.H., Tonge, P.J., Bravo, E., Li, X.
PDB entry 9ejy: Human hnRNPR extended eRRM1 domain
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-11-29
Authors: Eichhorn, C.D., Atsrim, E.S.
PDB entry 9ejz: Human M5 muscarinic acetylcholine receptor complex with mini-Gq, agonist acetylcholine and positive allosteric modulator VU6007678
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2024-11-30
Authors: Burger, W.A.C., Mobbs, J.I., Thal, D.M.
PDB entry 9ek0: Human M5 muscarinic acetylcholine receptor complex with mini-Gq and iperoxo
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-11-30
Authors: Burger, W.A.C., Mobbs, J.I., Thal, D.M.
PDB entry 9ek1: HIV-1 mature WT matrix protein p17 lattice
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.3 Å
Deposited: 2024-11-30
Authors: Rey, J.S., Perilla, J.R., Chen, L., Zhang, P.
PDB entry 9ek2: HIV-1 immature L20K/E73K/A82T matrix protein p17 lattice
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.3 Å
Deposited: 2024-11-30
Authors: Rey, J.S., Perilla, J.R., Chen, L., Zhang, P.
PDB entry 9ek3: HIV-1 immature WT matrix protein p17 lattice
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2024-11-30
Authors: Rey, J.S., Perilla, J.R., Chen, L., Zhang, P.
PDB entry 9ek5: TRIM21 PrySpry domain bound to an enhanced PRLX-93936 analog
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-11-30
Authors: Hinshaw, S.M., Corsello, S.M., Yuan, L., Lu, J., Martinez, M., Gray, N.S.
PDB entry 9ek6: Crystal structure of MAIT TCR in complex with MR1-5FU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2024-12-01
Authors: Awad, W., Rossjohn, J.
PDB entry 9ek7: Crystal structure of MAIT TCR in complex with MR1-5FdU
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-12-01
Authors: Awad, W., Rossjohn, J.
PDB entry 9ek8: Light Harvesting complex 2 (LH2), B800-B850, of Rhodoblastus (Rbl.) acidophilus strain 7750
Classification: PHOTOSYNTHESIS
Source organism: Rhodoblastus acidophilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2024-12-01
Authors: Harris, D., Schlau-Cohen, G.S.
PDB entry 9eka: CRISPR-associated deaminase Cad1 in Apo form
Classification: HYDROLASE
Source organism: Thermoanaerobaculum aquaticum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-02
Authors: Zhao, Y., Whyms, C.T., Li, H.
PDB entry 9ekb: Cryo-EM structure of apo-form human DNA polymerase delta
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-12-02
Authors: Murakami, K.S., Shin, Y.
PDB entry 9ekc: cryo-EM of CL1 tube (outer)
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-12-02
Authors: Wang, F., Gnewou, O., Tuachi, A., Egelman, E.H., Conticello, V.P.
PDB entry 9ekd: Structure of a C1r Zymogen Fragment Bound to SALO
Classification: IMMUNE SYSTEM,HYDROLASE
Source organism: Homo sapiens; Lutzomyia longipalpis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2024-12-02
Authors: Duan, H., Geisbrecht, B.V.
PDB entry 9eke: Structure of a C1r Zymogen Fragment Bound to SALO, Y51F Mutant
Classification: IMMUNE SYSTEM,HYDROLASE
Source organism: Homo sapiens; Lutzomyia longipalpis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-12-02
Authors: Duan, H., Geisbrecht, B.V.
PDB entry 9ekf: CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab 65C6 and an auto glycan occupying the receptor-binding site
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-12-02
Authors: Morano, N.C., Shapiro, L., Kwong, P.D.
PDB entry 9ekh: Cryo-EM structure ONO3030297-bound prostaglandin D2 receptor (DP1)-bRIL-Fab complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-12-02
Authors: Davoudinasab, B., Cherezov, V., Han, G.W., Kim, D.
PDB entry 9ekk: Thomasclavelia ramosa Immunoglobulin A Protease Middle (Protease) Domain with C-terminal Domain #1 (Crystallized as Purified)
Classification: HYDROLASE
Source organism: Thomasclavelia ramosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-12-02
Authors: Tran, N., Frenette, A., Holyoak, T.
PDB entry 9ekm: Thomasclavelia ramosa Immunoglobulin A Protease Middle (Protease) Domain with C-terminal Domain #1 (Metal Chelated)
Classification: HYDROLASE
Source organism: Thomasclavelia ramosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-12-02
Authors: Tran, N., Frenette, A., Holyoak, T.
PDB entry 9ekn: Thomasclavelia ramosa Immunoglobulin A Protease Middle (Protease) Domain with C-terminal Domain #1 (Metal Chelated and Zinc Supplemented)
Classification: HYDROLASE
Source organism: Thomasclavelia ramosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-12-02
Authors: Tran, N., Frenette, A., Holyoak, T.
PDB entry 9ekp: Crystal structure of WDR55 in complex with XS381774
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-12-03
Authors: Chen, U.H., Li, F., Zeng, H., Ahmad, H., Wang, X., Sun, J., Dong, A., Seitova, A., Arrowsmith, C.H., Edwards, A.M., Peng, H., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 9ekq: Inhibiting the Virulence of Gut Bacteria through Blocking the Activation of a Two-component Lanthipeptide Toxin
Classification: HYDROLASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-12-03
Authors: Chakraborty, B., Nair, S.K.
PDB entry 9eks: ML2-SA1 bound TRPML1-V432A/A433G in a partially open state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9ekt: (+)ML-SI3 bound TRPML1-V432A/A433G in a partially open state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9eku: (+)ML-SI3 bound TRPML1-V432A/A433G in a pre-open state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9ekv: ML-SA5 bound TRPML1 in an open state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9ekw: Apo TRPML2 in a closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9ekx: (-)ML-SI3 bound TRPML2 in a closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9eky: (+)ML-SI3 bound TRPML2 in a pre-open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9ekz: (+)ML-SI3 bound TRPML2 in an open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9el0: ML2-SA1 bound TRPML2 in a pre-open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9el1: ML2-SA1/PI(3,5)P2 bound TRPML2 in an open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-12-03
Authors: Schmiege, P., Li, X.
PDB entry 9el4: Crystal Structure of SARS-CoV-2 Mpro mutant E166A with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN, HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-12-03
Authors: Zvornicanin, S.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9el5: FANCM translocase domain bound to DNA
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-12-03
Authors: Bythell-Douglas, R., Murphy, V., Deans, A.J., Abbouche, L., Wolf, J., Rigoreau, L., Chapman, K.
PDB entry 9el6: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation F90L
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-12-04
Authors: Liu, C.
PDB entry 9el7: LSD1-CoREST in complex with T105 enantiomer (1R,2S)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2024-12-04
Authors: Caroli, J., Mattevi, A.
PDB entry 9el8: LSD1-CoREST in complex with T105 1S2R enantiomer
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2024-12-04
Authors: Caroli, J., Mattevi, A.
PDB entry 9ela: LSD1-CoREST in complex with T108, long soaking
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-12-04
Authors: Caroli, J., Mattevi, A.
PDB entry 9eld: Full-length and internally HIS-tagged yeast E3 ubiquitin ligase Tom1p in an open-conformation
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2024-12-04
Authors: Madrigal, J.M.
PDB entry 9ele: Cryo-EM structure of SARS-CoV-2 Omicron KP.3.1.1 RBD in complex with human ACE2 (local refinement of RBD and hACE2)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elf: Cryo-EM structure of SARS-CoV-2 Omicron KP.3.1.1 spike protein in complex with human ACE2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elg: Cryo-EM structure of SARS-CoV-2 Omicron KP.3.1.1 spike RBD and NTD (local refinement of RBD and NTD)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elh: Cryo-EM structure of SARS-CoV-2 Omicron KP.3.1.1 spike protein (one RBD up state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9eli: Cryo-EM structure of SARS-CoV-2 Omicron KP.3.1.1 spike protein (closed state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elj: Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11+Q493E+S31deletion spike protein (one RBD up state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elk: Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11+Q493E+S31deletion spike protein (closed state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9ell: Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11 spike protein (one RBD up state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elm: Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11 spike protein (closed state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9eln: Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11+S31 deletion spike protein (one RBD up state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elo: Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11+S31 deletion spike protein (closed state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elp: Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11.1+S31 deletion spike protein (one RBD up state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elq: Cryo-EM structure of SARS-CoV-2 Omicron JN.1.11.1+S31 deletion spike protein (closed state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-12-04
Authors: Feng, Z., Huang, J., Ward, A.B.
PDB entry 9elr: env2 cobalamin riboswitch aptamer domain in complex with ethynyl-2-naphthalenepropiolate-cobalamin
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-12-04
Authors: Olenginski, L.T., Wolters, T.A., Batey, R.T.
PDB entry 9elu: CRYSTAL STRUCTURE OF RHESUS MACAQUE (MACACA MULATTA) IGG1 FC FRAGMENT- FC-GAMMA RECEPTOR IIA COMPLEX P131 VARIANT
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-12-05
Authors: Tolbert, W.D., Pazgier, M.
PDB entry 9elv: Crystal Structure of SARS-CoV-2 Mpro mutant E166V with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN, HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2024-12-05
Authors: Zvornicanin, S.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9elw: CRYSTAL STRUCTURE OF RHESUS MACAQUE (MACACA MULATTA) IGG1 FC FRAGMENT- FC-GAMMA RECEPTOR IIA COMPLEX H131 VARIANT
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2024-12-05
Authors: Tolbert, W.D., Pazgier, M.
PDB entry 9elx: Crystal Structure of human cyclic GMP-AMP synthase (cGAS) in complex with compound 5; 3-((2-((3-chloro-4-fluorophenyl)amino)-2-oxoethyl)carbamoyl)picolinic acid
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2024-12-05
Authors: Sietsema, D.V.
PDB entry 9ely: raiA RNA motif (Clostridium acetobutylicum)
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-05
Authors: Kretsch, R.C., Wu, Y., Nye, G., Das, R., Chiu, W.
PDB entry 9elz: CRYSTAL STRUCTURE OF RHESUS MACAQUE (MACACA MULATTA) IGG2 FC FRAGMENT- FC-GAMMA RECEPTOR IIA COMPLEX H131 VARIANT
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-12-05
Authors: Tolbert, W.D., Pazgier, M.
PDB entry 9em0: OPR3 wild type in its dimeric form with special L6 conformation
Classification: FLAVOPROTEIN
Source organism: Solanum lycocarpum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-03-07
Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B.
PDB entry 9em1: Human pyridoxal phosphatase in complex with 7,8-dihydroxyflavone and phosphate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-03-07
Authors: Brenner, M., Gohla, A., Schindelin, H.
PDB entry 9em2: OPR3 wild type in its dimeric form obtained without sulfate
Classification: FLAVOPROTEIN
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-03-07
Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B.
PDB entry 9em3: OPR3 wild type in its monomeric form
Classification: FLAVOPROTEIN
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2024-03-07
Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B.
PDB entry 9em4: OPR3 variant Y364P in its dimeric form obtained with ammonium sulfate
Classification: FLAVOPROTEIN
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2024-03-07
Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B.
PDB entry 9em5: OPR3 variant Y364P in its monomeric form
Classification: FLAVOPROTEIN
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-03-07
Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B.
PDB entry 9em6: OPR3 variant Y364P in its dimeric form obtained without ammonium sulfate
Classification: FLAVOPROTEIN
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-03-07
Authors: Bijelic, A., Macheroux, P., Kerschbaumer, B.
PDB entry 9em7: Oligomeric structure of SynDLP in presence of GTP
Classification: LIPID BINDING PROTEIN
Source organism: Synechocystis sp. PCC 6803
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-03-07
Authors: Junglas, B., Gewehr, L., Schoennenbeck, P., Schneider, D., Sachse, C.
PDB entry 9em8: Oligomeric structure of SynDLP in presence of GDP
Classification: LIPID BINDING PROTEIN
Source organism: Synechocystis sp. PCC 6803
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-03-07
Authors: Junglas, B., Gewehr, L., Schoennenbeck, P., Schneider, D., Sachse, C.
PDB entry 9em9: Structure of SynDLP MGD with GMPPNP
Classification: LIPID BINDING PROTEIN
Source organism: Synechocystis sp. PCC 6803
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.76 Å
Deposited: 2024-03-07
Authors: Junglas, B., Gewehr, L., Schoennenbeck, P., Schneider, D., Sachse, C.
PDB entry 9ema: RUVBL1/2 in complex with ATP and CB-6644 inhibitor
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-03-07
Authors: Lopez-Perrote, A., Llorca, O., Garcia-Martin, C.
PDB entry 9emb: Structure of KefC Asp156Asn variant
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-03-07
Authors: Gulati, A., Kokane, S., Drew, D.
PDB entry 9emc: RUVBL1/2 in complex with ATP
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2024-03-11
Authors: Lopez-Perrote, A., Llorca, O., Garcia-Martin, C.
PDB entry 9emd: Crystal structure of Histidine acetyltransferase with L-histidine and coenzyme A disulfide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-03-08
Authors: Myllykoski, M., Arnesen, T.
PDB entry 9eme: AL amyloid fibril from the FOR103 light chain
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-03-08
Authors: Pfeiffer, P.B., Karimi-Farsijani, S., Kupfer, N., Schmidt, M., Faendrich, M.
PDB entry 9emf: KOD-H4 DNA polymerase mutant in a binary complex with DNA:DNA containing one HNA nucleotide
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-03-08
Authors: Gutfreund, C., Betz, K.
PDB entry 9emg: SmNuc1 nuclease from Stenotrophomonas maltophilia in complex with guanosine-5'-monophosphate as a product of c-di-GMP cleavage
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.148 Å
Deposited: 2024-03-08
Authors: Adamkova, K., Koval, T., Kolenko, P., Dohnalek, J.
PDB entry 9emh: KOD-H4 DNA polymerase mutant in a binary complex with DNA:DNA containing two HNA nucleotides
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-03-08
Authors: Gutfreund, C., Betz, K.
PDB entry 9emi: KOD-H4 DNA polymerase mutant in a ternary complex containing six HNA nucleotides and a non-hydrolyzable triphosphate
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2024-03-08
Authors: Gutfreund, C., Betz, K.
PDB entry 9emj: SARS-CoV-2 methyltransferase nsp10-16 in complex with Toyocamycin and m7GpppA (Cap0-analog)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-03-08
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9emk: DupA from legionella covalently bound to ubiquitin-based probe
Classification: UNKNOWN FUNCTION
Source organism: Legionella pneumophila subsp. pneumophila; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-03-08
Authors: Kim, R.Q., Kloet, M.S., van der Heden van Noort, G.
PDB entry 9eml: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and m7GpppA (Cap0-analog)/m7GpppAm (Cap1-analog)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-03-08
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9emm: Glucose-6-phosphate dehydrogenase (G6PDH) in complex with protein OpcA from Synechocystis sp. PCC 6803
Classification: OXIDOREDUCTASE
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-03-08
Authors: Shvarev, D.
PDB entry 9emn: Glucose-6-phosphate dehydrogenase (G6PDH) from Synechocystis sp. PCC 6803
Classification: OXIDOREDUCTASE
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-03-08
Authors: Shvarev, D.
PDB entry 9emo: Crystal structure of Histidine acetyltransferase with L-arginine and coenzyme A disulfide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-03-09
Authors: Myllykoski, M., Arnesen, T.
PDB entry 9emp: Crystal structure of Histidine acetyltransferase with N-myristoyl histidine and coenzyme A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-03-09
Authors: Myllykoski, M., Arnesen, T.
PDB entry 9emq: Crystal Structure of DC-SIGN in complex with AL86
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-03-09
Authors: Jakob, R.P., Cramer, J., Maier, T.
PDB entry 9emr: Crystal Structure of DC-SIGN in complex with AL90
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-03-09
Authors: Jakob, R.P., Cramer, J., Maier, T.
PDB entry 9ems: Crystal Structure of DC-SIGN in complex with JXH1902
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-03-09
Authors: Jakob, R.P., Cramer, J., Maier, T.
PDB entry 9emt: Crystal structure of Histidine acetyltransferase with imidazole and coenzyme A disulfide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-03-11
Authors: Myllykoski, M., Arnesen, T.
PDB entry 9emu: RosC-8-demethyl-8-amino-FMN - Phosphate complex
Classification: HYDROLASE
Source organism: Streptomyces davaonensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-03-11
Authors: Ermler, U., Mack, M., Demmer, U.
PDB entry 9emv: SARS-CoV-2 nsp10-16 methyltransferase in complex with Sangivamycin and m7GpppA (Cap0-analog)/m7GpppAm (Cap1-analog)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-03-11
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Scheer, T.E.S.
PDB entry 9emw: Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 Y7F Mutant bound to ImmH-Forodesine
Classification: TRANSFERASE
Source organism: Chroococcidiopsis thermalis PCC 7203
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2024-03-11
Authors: Tang, P., Harding, C.J., Czekster, C.M.
PDB entry 9emx: Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 Double Mutant Y7F A9S bound to Cordycepin
Classification: TRANSFERASE
Source organism: Chroococcidiopsis thermalis PCC 7203
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-03-11
Authors: Tang, P., Harding, C.J., Czekster, C.M.
PDB entry 9emy: P. falciparum FIKK13 in complex with ATPgammaS
Classification: PEPTIDE BINDING PROTEIN
Source organism: Lama glama; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.814 Å
Deposited: 2024-03-11
Authors: Purkiss, A.G., Ogrodowicz, R.W., Christodoulou, E., Kjaer, S.
PDB entry 9emz: 13C/15N-labelled Integral Membrane Enzyme LspA in the Lipid Cubic Phase
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-03-12
Authors: Bailey, J., Boland, C., Caffrey, M., Huang, C.-Y., Gawrisch, K., Kooshapur, H., Ramberg, K.O., Soubias, O., Wiktor, M.
PDB entry 9en0: KOD-H4 DNA polymerase mutant in a unproductive binary complex with DNA:DNA containing six HNA nucleotides
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis KOD1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2024-03-12
Authors: Gutfreund, C., Betz, K.
PDB entry 9en1: FliG interacting domain of SpFlhF (FID)
Classification: SIGNALING PROTEIN
Source organism: Shewanella putrefaciens CN-32
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2024-03-12
Authors: Dornes, A., Mais, C.-N., Bange, G.
PDB entry 9en2: Crystal structure of the metalloproteinase enhancer PCPE-1 complexed with nanobodies VHH-H4 and VHH-I5
Classification: CELL ADHESION
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-03-12
Authors: Lagoutte, P., Gueguen-Chaignon, V., Bourhis, J.-M., Vadon-Le Goff, S.
PDB entry 9en3: Crystal structure of Histidine acetyltransferase with L-histidine and S-ethyl-coenzyme A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-03-12
Authors: Myllykoski, M., Arnesen, T.
PDB entry 9en4: VP8* domain of the spike protein VP4 from bovine P[3] strain of rotavirus species C
Classification: VIRAL PROTEIN
Source organism: Bovine rotavirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-03-12
Authors: Paredes-Martinez, F., Casino, P.
PDB entry 9en5: Crystal structure of yeast E2 Ubiquitin-conjugating enzyme Ubc6 UBC domain
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2024-03-12
Authors: Swarnkar, A., Stein, A.
PDB entry 9en6: Crystal structure of RNA G2C4 repeats - native model pH 6.5
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 0.918 Å
Deposited: 2024-03-12
Authors: Mateja-Pluta, M., Kiliszek, A.
PDB entry 9en7: Hrp48 RRM1 domain
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2024-03-12
Authors: Lomoschitz, A., Hennig, J., Murciano, B., Meyer, J.
PDB entry 9en8: Human Carbonic Anhydrase II in complex with (4-{[(4-sulfamoylphenyl)amino]methyl}phenyl)boronic acid
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2024-03-12
Authors: Chiara, B., Marta, F.
PDB entry 9en9: Human Carbonic Anhydrase IX-mimic in complex with (4-{[(4-sulfamoylphenyl)amino]methyl}phenyl)boronic acid
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-03-12
Authors: Chiara, B., Marta, F.
PDB entry 9ena: Lysosomal glucocerebrosidase in complex with a stabilizing nanobody
Classification: HYDROLASE
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-03-12
Authors: Dal Maso, T., Versees, W.
PDB entry 9enb: Human pseudouridine synthase 3 (PUS3 R116A mutant) and two tRNA-Gln
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2024-03-12
Authors: Lin, T.-Y., Jezowski, J., Glatt, S.
PDB entry 9enc: Human pseudouridine synthase 3 (PUS3 R116A mutant) and one tRNA-Gln
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-03-12
Authors: Lin, T.-Y., Jezowski, J., Glatt, S.
PDB entry 9end: Crystal structure of Methanopyrus kandleri malate dehydrogenase mutant 3
Classification: OXIDOREDUCTASE
Source organism: Methanopyrus kandleri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-03-12
Authors: Coquille, S., Roche, J., Girard, E., Madern, D.
PDB entry 9ene: Human pseudouridine synthase 3 (PUS3 D118A mutant) and two tRNA-Arg
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-03-12
Authors: Lin, T.-Y., Jezowski, J., Glatt, S.
PDB entry 9enf: Human pseudouridine synthase 3 (PUS3 D118A mutant) and two pre-tRNA-Arg
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-03-12
Authors: Lin, T.-Y., Jezowski, J., Glatt, S.
PDB entry 9eng: Structure of K.pneumoniae LpxH in complex with EBL-3218
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-03-12
Authors: Sooriyaarachchi, S., Bergfors, T., Jones, T.A., Mowbray, S.L.
PDB entry 9enh: L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum
Classification: OXIDOREDUCTASE
Source organism: Hebeloma cylindrosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-03-13
Authors: Gilzer, D., Koopmeiners, S., Fischer von Mollard, G., Niemann, H.H.
PDB entry 9eni: L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-glutamine
Classification: OXIDOREDUCTASE
Source organism: Hebeloma cylindrosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-03-13
Authors: Gilzer, D., Koopmeiners, S., Fischer von Mollard, G., Niemann, H.H.
PDB entry 9enj: L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-glutamate
Classification: OXIDOREDUCTASE
Source organism: Hebeloma cylindrosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-03-13
Authors: Gilzer, D., Koopmeiners, S., Fischer von Mollard, G., Niemann, H.H.
PDB entry 9enk: L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-phenylalanine
Classification: OXIDOREDUCTASE
Source organism: Hebeloma cylindrosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-03-13
Authors: Gilzer, D., Koopmeiners, S., Fischer von Mollard, G., Niemann, H.H.
PDB entry 9enn: L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with N-epsilon-acetyl-L-lysine
Classification: OXIDOREDUCTASE
Source organism: Hebeloma cylindrosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-03-13
Authors: Gilzer, D., Koopmeiners, S., Fischer von Mollard, G., Niemann, H.H.
PDB entry 9eno: Crystal structure of ComplemEnT1.4 (CEnT1.4), an engineered photoenzyme for selective [2+2]-cycloadditions
Classification: BIOSYNTHETIC PROTEIN
Source organism: Loligo vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2024-03-13
Authors: Hardy, F.J., Crawshaw, R.C., Green, A.P.
PDB entry 9enp: HSV-1 DNA polymerase-processivity factor complex in exonuclease state with 1-bp DNA mismatch
Classification: TRANSFERASE
Source organism: Human alphaherpesvirus 1 strain KOS; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.12 Å
Deposited: 2024-03-13
Authors: Gustavsson, E., Grunewald, K., Elias, P., Hallberg, B.M.
PDB entry 9enq: HSV-1 DNA polymerase-processivity factor complex in exonuclease state active site with 1-bp DNA mismatch
Classification: TRANSFERASE
Source organism: Human alphaherpesvirus 1 strain KOS; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.12 Å
Deposited: 2024-03-13
Authors: Gustavsson, E., Grunewald, K., Elias, P., Hallberg, B.M.
PDB entry 9enr: Vitellogenin from the honey bee hemolymph
Classification: LIPID BINDING PROTEIN
Source organism: Apis cerana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-03-13
Authors: Montserrat-Canals, M., Schnelle, K., Moeller, A., Cunha, E., Luecke, H.
PDB entry 9ens: Cleavage product of vitellogenin from the honey bee hemolymph
Classification: LIPID BINDING PROTEIN
Source organism: Apis cerana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-03-13
Authors: Montserrat-Canals, M., Schnelle, K., Moeller, A., Cunha, E., Luecke, H.
PDB entry 9ent: SSX structure of Autotaxin in cryogenic conditions
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-03-13
Authors: Eymery, M.C., McCarthy, A.A., Foos, N., Basu, S.
PDB entry 9env: Apo GES-1 beta-Lactamase Crystallised with Citric Acid
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-03-13
Authors: Beer, M., Hinchliffe, P., Spencer, J.
PDB entry 9enw: Apo GES-1 beta-Lactamase
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-03-13
Authors: Beer, M., Hinchliffe, P., Spencer, J.
PDB entry 9enx: Enmetazobactam-Derived GES-1 Acyl-Enzyme
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2024-03-13
Authors: Beer, M., Hinchliffe, P., Spencer, J.
PDB entry 9eny: Tazobactam-Derived GES-1 Acyl-Enzyme
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-03-13
Authors: Beer, M., Hinchliffe, P., Spencer, J.
PDB entry 9enz: X-ray structure of the adduct formed upon reaction of picoplatin with lysozyme (structure A)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-03-14
Authors: Ferraro, G., Merlino, A.
PDB entry 9eo0: Small-Molecule Inhibitors of Programmed Cell Death-1/Programmed Death-Ligand 1
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-03-14
Authors: Plewka, J., Hec, A., Sitar, T., Holak, T.
PDB entry 9eo1: Cryo_EM structure of human FAN1 in complex with 5' flap DNA substrate
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-03-14
Authors: Jeyasankar, G., Salerno-Kochan, A., Thomsen, M.
PDB entry 9eo2: X-ray structure of the adduct formed upon reaction of picoplatin with lysozyme (structure B)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2024-03-14
Authors: Ferraro, G., Merlino, A.
PDB entry 9eo4: Outward-open structure of human dopamine transporter bound to cocaine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2024-03-14
Authors: Nielsen, J.C., Salomon, K., Kalenderoglou, I.E., Bargmeyer, S., Pape, T., Shahsavar, A., Loland, C.J.
PDB entry 9eo5: X-ray structure of the adduct formed upon reaction of picoplatin with bovine pancreatic ribonuclease (structure C)
Classification: RNA BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-03-14
Authors: Ferraro, G., Merlino, A.
PDB entry 9eo6: SARS-CoV2 major protease in complex with a covalent inhibitor SLL11.
Classification: ANTIVIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-03-14
Authors: Moche, M., Lennerstrand, J., Nyman, T., Strandback, E., Akaberi, D.
PDB entry 9eo7: PHF type tau filament from V337M mutant
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-03-14
Authors: Qi, C., Scheres, S.H.W., Michel, G.
PDB entry 9eo8: X-ray structure of the adduct formed upon reaction of picoplatin with bovine pancreatic ribonuclease (structure D)
Classification: RNA BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-03-14
Authors: Ferraro, G., Merlino, A.
PDB entry 9eo9: SF type tau filament from V337M mutant
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-03-14
Authors: Qi, C., Scheres, S.H.W., Michel, G.
PDB entry 9eoa: Cryo_EM structure of human FAN1 in complex with 5' flap DNA substrate and PCNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2024-03-14
Authors: Jeyasankar, G., Salerno-Kochan, A., Thomsen, M.
PDB entry 9eob: Engineered GH181 sialidase from Akkermansia muciniphila
Classification: HYDROLASE
Source organism: Akkermansia muciniphila ATCC BAA-835
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-03-14
Authors: Pichler, M.J., Banerjee, S., Nielsen, T.S., Morth, J.P., Abou Hachem, M.
PDB entry 9eoc: Structure of the Integrator arm module containing INTS10/13/14 subunits
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-03-14
Authors: Razew, M., Galej, W.P.
PDB entry 9eod: Human serum albumin with adamantene carboxylic acid
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-03-14
Authors: Freitag-Pohl, S., Pohl, E.
PDB entry 9eoe: TF type tau filament from V337M mutant
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-03-14
Authors: Qi, C., Scheres, S.H.W., Michel, G.
PDB entry 9eof: Structure of the human INTS5/8/10/15 subcomplex
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.7 Å
Deposited: 2024-03-14
Authors: Razew, M., Galej, W.P.
PDB entry 9eog: PHF type tau filament from R406W mutant
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-03-14
Authors: Qi, C., Scheres, S.H.W., Michel, G.
PDB entry 9eoh: PHF type tau filament from in vitro V337M mutant
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-03-14
Authors: Qi, C., Lovestam, S., Scheres, S.H.W., Michel, G.
PDB entry 9eoi: Crystal structure of the GH19 endolysin from Pseudomonas aeruginosa
Classification: CARBOHYDRATE
Source organism: Pseudomonas aeruginosa UCBPP-PA14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-03-14
Authors: Edvardsen, P.K.T., Englund, A.N.B., Rohr, A.K., Vaaje-Kolstad, G.
PDB entry 9eoj: Vertebrate microtubule-capping gamma-tubulin ring complex
Classification: CELL CYCLE
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 17 Å
Deposited: 2024-03-15
Authors: Vermeulen, B.J.A., Pfeffer, S.
PDB entry 9eok: Minus end of the vertebrate gamma-tubulin ring complex-capped microtubule
Classification: CELL CYCLE
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 23 Å
Deposited: 2024-03-15
Authors: Vermeulen, B.J.A., Pfeffer, S.
PDB entry 9eol: N-acetylglucosamine 6-phosphate dehydratase: inhibited 6-phosphogluconic acid state of NagS
Classification: SUGAR BINDING PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2024-03-15
Authors: McNae, I.W., Abrahams, J.P., Li, C.
PDB entry 9eom: 250A Vipp1 dL10Ala helical tubes in the presence of EPL
Classification: LIPID BINDING PROTEIN
Source organism: Synechocystis sp. PCC 6803
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.5 Å
Deposited: 2024-03-15
Authors: Junglas, B., Sachse, C.
PDB entry 9eon: 270A Vipp1 dL10Ala helical tubes in the presence of EPL
Classification: LIPID BINDING PROTEIN
Source organism: Synechocystis sp. PCC 6803
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.4 Å
Deposited: 2024-03-15
Authors: Junglas, B., Sachse, C.