LiteFold/PDB huggingface dataset:
PDB entry 7bx8: Mycobacterium smegmatis arabinosyltransferase complex EmbB2-AcpM2 in symmetric ""resting state""
Classification: TRANSFERASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-04-17
Authors: Gao, R.G., Zhang, L., Wang, Q., Rao, Z.H.
PDB entry 7bx9: Purification, characterization and X-ray structure of YhdA-type azoreductase from Bacillus velezensis
Classification: OXIDOREDUCTASE
Source organism: Bacillus amyloliquefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2020-04-18
Authors: Khan, F., Suguna, K.
PDB entry 7bxa: Crystal structure of PD-1 in complex with tislelizumab Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2020-04-18
Authors: Heo, Y.S., Lee, S.H., Lim, H., Lee, H.T., Kim, Y.J., Park, E.B.
PDB entry 7bxb: Crystal structure of Ca_00311
Classification: HYDROLASE
Source organism: Collinsella aerofaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2020-04-18
Authors: Fan, C.P.
PDB entry 7bxc: Crystal structure of Ca_00311 form II
Classification: HYDROLASE
Source organism: Collinsella aerofaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-04-19
Authors: Fan, C.P.
PDB entry 7bxd: Crystal structure of Ca_00815
Classification: HYDROLASE
Source organism: Collinsella aerofaciens ATCC 25986
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2020-04-19
Authors: Fan, C.P.
PDB entry 7bxf: MvcA-Lpg2149 complex
Classification: TRANSFERASE
Source organism: Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-04-19
Authors: Gao, P.
PDB entry 7bxg: MavC-UBE2N-Ub complex
Classification: TRANSFERASE
Source organism: Homo sapiens; Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.705 Å
Deposited: 2020-04-19
Authors: Gao, P., Wang, Y.
PDB entry 7bxh: MavC-Lpg2149 complex
Classification: TRANSFERASE
Source organism: Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-04-19
Authors: Gao, P., Wang, Y.
PDB entry 7bxo: Crystal structure of the toxin-antitoxin with AMP-PNP
Classification: TOXIN
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2020-04-20
Authors: Ouyang, S.Y., Zhen, X.K.
PDB entry 7bxp: 2-amino-3-ketobutyrate CoA ligase from Cupriavidus necator
Classification: LIGASE,TRANSFERASE
Source organism: Cupriavidus necator
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-04-20
Authors: Motoyama, T., Nakano, S., Hasebe, F., Miyoshi, N., Ito, S.
PDB entry 7bxq: 2-amino-3-ketobutyrate CoA ligase from Cupriavidus necator L-Threonine binding form
Classification: LIGASE,TRANSFERASE
Source organism: Cupriavidus necator
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2020-04-20
Authors: Motoyama, T., Nakano, S., Hasebe, F., Miyoshi, N., Ito, S.
PDB entry 7bxr: 2-amino-3-ketobutyrate CoA ligase from Cupriavidus necator 3-Hydroxynorvaline binding form
Classification: LIGASE,TRANSFERASE
Source organism: Cupriavidus necator
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-04-20
Authors: Motoyama, T., Nakano, S., Hasebe, F., Miyoshi, N., Ito, S.
PDB entry 7bxs: 2-amino-3-ketobutyrate CoA ligase from Cupriavidus necator glycine binding form
Classification: LIGASE,TRANSFERASE
Source organism: Cupriavidus necator
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-04-20
Authors: Motoyama, T., Nakano, S., Hasebe, F., Miyoshi, N., Ito, S.
PDB entry 7bxt: The cryo-EM structure of CENP-A nucleosome in complex with CENP-C peptide and CENP-N N-terminal domain
Classification: CELL CYCLE/DNA
Source organism: Gallus gallus; Homo sapiens; unidentified cloning vector; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-04-20
Authors: Ariyoshi, M., Makino, F., Fukagawa, T.
PDB entry 7bxu: CLC-7/Ostm1 membrane protein complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-04-20
Authors: Zhang, S.S., Yang, M.J.
PDB entry 7bxv: 11A1 antibody-peptide complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-04-21
Authors: Irie, K., Irie, Y., Kita, A., Miki, K.
PDB entry 7bxw: Crystal structure ofF RTT109 FROM Candida albicans
Classification: TRANSFERASE
Source organism: Candida albicans (strain SC5314 / ATCC MYA-2876)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77629 Å
Deposited: 2020-04-21
Authors: Lei, J.H., Chen, Y.P., Lu, D.R., Su, D.
PDB entry 7bxx: Tetanus neurotoxin translocation domain -C467S
Classification: TOXIN
Source organism: Clostridium tetani (strain Massachusetts / E88)
Experimental method: X-RAY DIFFRACTION, SOLUTION SCATTERING
Resolution: 2.34 Å
Deposited: 2020-04-21
Authors: Zhang, C.M., Imoto, Y., Fukuda, Y., Yamashita, E., Inoue, T.
PDB entry 7bxy: mRNA interferase from Bacillus cereus
Classification: HYDROLASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-04-21
Authors: Kang, S.M.
PDB entry 7bxz: Crystal structure of the aminoglycoside 6'-N-acetyltransferase from Enterococcus faecium
Classification: TRANSFERASE
Source organism: Enterococcus faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.502 Å
Deposited: 2020-04-21
Authors: Kwon, S., Park, H.H.
PDB entry 7by0: The cryo-EM structure of CENP-A nucleosome in complex with the phosphorylated CENP-C
Classification: CELL CYCLE
Source organism: Gallus gallus; Homo sapiens; unidentified cloning vector; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2020-04-21
Authors: Ariyoshi, M., Makino, F., Fukagawa, T.
PDB entry 7by1: Crystal structure of GCN5 PCAF N-terminal domain
Classification: UNKNOWN FUNCTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-04-21
Authors: Hibi, R., Toma-Fukai, S., Shimizu, T.
PDB entry 7by2: Toxin-antitoxin complex from Klebsiella pneumoniae
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-04-21
Authors: Kang, S.M.
PDB entry 7by3: Toxin-antitoxin complex from klebsiella pneumoniae
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-21
Authors: Kang, S.M.
PDB entry 7by4: Tetanus neurotoxin receptor binding domain
Classification: TOXIN
Source organism: Clostridium tetani (strain Massachusetts / E88)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-21
Authors: Zhang, C.M., Imoto, Y., Inoue, T.
PDB entry 7by5: Tetanus neurotoxin mutant-(H233A/E234Q/H237A/Y375F)
Classification: TOXIN
Source organism: Clostridium tetani (strain Massachusetts / E88)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2020-04-21
Authors: Zhang, C.M., Imoto, Y., Fukuda, Y., Yamashita, E., Inoue, T.
PDB entry 7by6: Plasmodium vivax cytoplasmic Phenylalanyl-tRNA synthetase in complex with BRD1389
Classification: LIGASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 2.997 Å
Deposited: 2020-04-21
Authors: Malhotra, N., Manmohan, S., Harlos, K., Melillo, B., Schreiber, S.L., Manickam, Y., Sharma, S.
PDB entry 7by7: Bacteriophage SPO1 protein Gp46
Classification: ANTIMICROBIAL PROTEIN
Source organism: Bacillus phage SP01
Experimental method: SOLUTION NMR
Deposited: 2020-04-22
Authors: Liu, B., Zhang, P.
PDB entry 7by8: Malate Dehydrogenase from Geobacillus stearothermophilus (gs-MDH)
Classification: OXIDOREDUCTASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.945 Å
Deposited: 2020-04-22
Authors: Shimozawa, Y., Nakamura, T., Himiyama, T., Nishiya, Y.
PDB entry 7by9: Malate Dehydrogenase from Geobacillus stearothermophilus (gs-MDH) complexed with Oxaloacetic Acid (OAA) and Nicotinamide Adenine Dinucleotide (NAD)
Classification: OXIDOREDUCTASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-04-22
Authors: Shimozawa, Y., Nakamura, T., Himiyama, T., Nishiya, Y.
PDB entry 7bya: Malate Dehydrogenase from Geobacillus stearothermophilus (gs-MDH) complexed with Oxaloacetic Acid (OAA) and Adenosine 5'-Diphosphoribose (APR)
Classification: OXIDOREDUCTASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-04-22
Authors: Shimozawa, Y., Nakamura, T., Himiyama, T., Nishiya, Y.
PDB entry 7byd: Crystal structure of SN45 TCR in complex with lipopeptide-bound Mamu-B*05104
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.80003 Å
Deposited: 2020-04-22
Authors: Morita, D., Sugita, M., Iwashita, C.
PDB entry 7bye: Toxin-antitoxin complex from klebsiella pneumoniae
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae; Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-04-22
Authors: Kang, S.M.
PDB entry 7byf: The crystal structure of mouse ORF10-Rae1-Nup98 complex
Classification: PROTEIN BINDING
Source organism: Murid herpesvirus 4; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-04-22
Authors: Gao, P., Feng, H.
PDB entry 7byi: Structure of SHMT2 in complex with CBX
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2020-04-23
Authors: Li, L., Chen, Y., Lu, D., Zhang, C., Su, D.
PDB entry 7byj: Crystal structure of the FERM domain of FRMPD4
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2020-04-23
Authors: Lin, L., Wang, M., Wang, C., Zhu, J.
PDB entry 7byk: Crystal structure of the Legionella pneumophila LegK7 effector kinase
Classification: TRANSFERASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-04-23
Authors: Park, S.C., Kim, T.H., Yoon, S.I.
PDB entry 7byl: Cryo-EM structure of human KCNQ4
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2020-04-23
Authors: Shen, H., Li, T., Yue, Z.
PDB entry 7bym: Cryo-EM structure of human KCNQ4 with retigabine
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-23
Authors: Shen, H., Li, T., Yue, Z.
PDB entry 7byn: Cryo-EM structure of human KCNQ4 with linopirdine
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-04-23
Authors: Shen, H., Li, T., Yue, Z.
PDB entry 7byo: Lysozyme structure SS1 from SS mode
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-24
Authors: Kang, H.S., Lee, S.J.
PDB entry 7byp: Lysozyme structure SASE1 from SASE mode
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-24
Authors: Kang, H.S., Lee, S.J.
PDB entry 7byq: The mutant variant of PNGM-1. H279A was substituted for alanine to study metal coordination.
Classification: ANTIBIOTIC
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2020-04-24
Authors: Park, Y.S., Kang, L.W., Lee, J.H.
PDB entry 7byr: BD23-Fab in complex with the S ectodomain trimer
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2020-04-24
Authors: Zhu, Q., Wang, G., Xiao, J.
PDB entry 7bys: Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A apo form
Classification: HYDROLASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-04-24
Authors: Matsuyama, K., Ishida, T., Kishine, N., Fujimoto, Z., Igarashi, K., Kaneko, S.
PDB entry 7byt: Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A with galactose
Classification: HYDROLASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-24
Authors: Matsuyama, K., Ishida, T., Kishine, N., Fujimoto, Z., Igarashi, K., Kaneko, S.
PDB entry 7byu: Crystal structure of Acidovorax avenae L-fucose mutarotase (apo form)
Classification: SUGAR BINDING PROTEIN
Source organism: Acidovorax avenae subsp. avenae ATCC 19860
Experimental method: X-RAY DIFFRACTION
Resolution: 2.206 Å
Deposited: 2020-04-24
Authors: Watanabe, Y., Fukui, Y., Watanabe, S.
PDB entry 7byv: Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A E208Q with beta-1,3-galactotriose
Classification: HYDROLASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-04-24
Authors: Matsuyama, K., Ishida, T., Kishine, N., Fujimoto, Z., Igarashi, K., Kaneko, S.
PDB entry 7byw: Crystal structure of Acidovorax avenae L-fucose mutarotase (L-fucose-bound form)
Classification: SUGAR BINDING PROTEIN
Source organism: Acidovorax avenae subsp. avenae ATCC 19860
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-04-24
Authors: Watanabe, Y., Watanabe, S.
PDB entry 7byx: Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A E208A with beta-1,3-galactotriose
Classification: HYDROLASE
Source organism: Phanerochaete chrysosporium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-04-24
Authors: Matsuyama, K., Ishida, T., Kishine, N., Fujimoto, Z., Igarashi, K., Kaneko, S.
PDB entry 7byy: Crystal structure of bacterial toxin
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.799 Å
Deposited: 2020-04-25
Authors: Zhang, C., Yashiro, Y., Tomita, K.
PDB entry 7bz0: complex structure of alginate lyase AlyF-OU02 with G6
Classification: LYASE
Source organism: Vibrio splendidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-04-26
Authors: Liu, W., Lyu, Q., Zhang, K.
PDB entry 7bz1: The mutant variant of PNGM-1. H96 was substituted for alanine to study metal coordination.
Classification: ANTIBIOTIC
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2020-04-26
Authors: Park, Y.S., Kang, L.W., Lee, J.H.
PDB entry 7bz2: Cryo-EM structure of the formoterol-bound beta2 adrenergic receptor-Gs protein complex.
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.82 Å
Deposited: 2020-04-26
Authors: Zhang, Y.N., Yang, F., Ling, S.L., Lv, P., Zhou, Y.X., Fang, W., Sun, W., Shi, P., Tian, C.L.
PDB entry 7bz3: The mutant variant of PNGM-1. H257 was substituted for alanine to study substrate binding.
Classification: ANTIBIOTIC
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-26
Authors: Park, Y.S., Kang, L.W., Lee, J.H.
PDB entry 7bz4: The mutant variant of PNGM-1. H279 was substituted for alanine to study metal coordination.
Classification: ANTIBIOTIC
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2020-04-26
Authors: Park, Y.S., Kang, L.W., Lee, J.H.
PDB entry 7bz5: Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-04-26
Authors: Wu, Y., Qi, J., Gao, F.
PDB entry 7bz6: Mycobacterium bovis AhpC
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium bovis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.302 Å
Deposited: 2020-04-27
Authors: Chong, S.M.S., Neelagandan, K., Gruber, G.
PDB entry 7bz7: Template lasso peptide C24 mutant F15Y
Classification: ANTIBIOTIC
Source organism: Streptomyces sp.
Experimental method: SOLUTION NMR
Deposited: 2020-04-27
Authors: Liu, X.H., Liu, T., Ma, X.J., Yu, J.H., Yang, D.H., Ma, M.
PDB entry 7bz8: Template lasso peptide C24 mutant V3A
Classification: ANTIBIOTIC
Source organism: Streptomyces sp.
Experimental method: SOLUTION NMR
Deposited: 2020-04-27
Authors: Liu, X.H., Liu, T., Ma, X.J., Yu, J.H., Yang, D.H., Ma, M.
PDB entry 7bz9: Template lasso peptide C24 mutant I4A
Classification: ANTIBIOTIC
Source organism: Streptomyces sp.
Experimental method: SOLUTION NMR
Deposited: 2020-04-27
Authors: Liu, X.H., Liu, T., Ma, X.J., Yu, J.H., Yang, D.H., Ma, M.
PDB entry 7bza: Template lasso peptide C24
Classification: ANTIBIOTIC
Source organism: Streptomyces sp.
Experimental method: SOLUTION NMR
Deposited: 2020-04-27
Authors: Liu, X.H., Liu, T., Ma, X.J., Yu, J.H., Yang, D.H., Ma, M.
PDB entry 7bzb: Crystal structure of plant sesterterpene synthase AtTPS18
Classification: LYASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.148 Å
Deposited: 2020-04-27
Authors: Li, J.X., Wang, G.D., Zhang, P.
PDB entry 7bzc: Crystal structure of plant sesterterpene synthase AtTPS18 complexed with farnesyl thiolodiphosphate (FSPP)
Classification: LYASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.303 Å
Deposited: 2020-04-27
Authors: Li, J.X., Wang, G.D., Zhang, P.
PDB entry 7bzd: Structure of Bacillus subtilis HxlR, wild type
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.612 Å
Deposited: 2020-04-27
Authors: Zhu, R., Chen, P.R.
PDB entry 7bze: Structure of Bacillus subtilis HxlR, K13A mutant
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.658 Å
Deposited: 2020-04-27
Authors: Zhu, R., Chen, P.R.
PDB entry 7bzf: COVID-19 RNA-dependent RNA polymerase post-translocated catalytic complex
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2020-04-27
Authors: Wang, Q., Gao, Y., Ji, W., Mu, A., Rao, Z.
PDB entry 7bzg: Structure of Bacillus subtilis HxlR, wild type in complex with formaldehyde and DNA
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis (strain 168); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-04-27
Authors: Zhu, R., Chen, P.R.
PDB entry 7bzh: Solution structure of a DNA binding protein from Sulfolobus islandicus
Classification: DNA BINDING PROTEIN
Source organism: Sulfolobus islandicus
Experimental method: SOLUTION NMR
Deposited: 2020-04-28
Authors: Zhang, Z., Liu, X.
PDB entry 7bzi: The mutant variant of PNGM-1. H91 was substituted for alanine to study metal coordination.
Classification: ANTIBIOTIC
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2020-04-28
Authors: Park, Y.S., Kang, L.W., Lee, J.H.
PDB entry 7bzj: The Discovery of Benzhydrol-Oxaborole Hybrid Derivatives as Leucyl-tRNA Synthetase Inhibitors
Classification: RNA BINDING PROTEIN/INHIBITOR
Source organism: Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-28
Authors: Liu, R.J., Li, H., Wang, E.D., Zhou, H.
PDB entry 7bzk: Crystal structure of ferredoxin: thioredoxin reductase and thioredoxin y1 complex
Classification: ELECTRON TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5935 Å
Deposited: 2020-04-28
Authors: Kurisu, G., Juniar, L., Tanaka, H.
PDB entry 7bzl: GH127 beta-L-arabinofuranosidase HypBA1 covalently complexed with beta-L-arabinofuranose-configured cyclophellitol
Classification: HYDROLASE
Source organism: Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-04-28
Authors: Amaki, S., McGregor, N.G.S., Arakawa, T., Yamada, C., Borlandelli, V., Overkleeft, H.S., Davies, G.J., Fushinobu, S.
PDB entry 7bzm: Crystal structure of rice Os3BGlu7 with glucoimidazole
Classification: HYDROLASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-04-28
Authors: Pengthaisong, S., Ketudat Cairns, J.R., Tankrathok, A.
PDB entry 7bzn: Cryo-EM structure of mature Coxsackievirus A10 at pH 7.4
Classification: VIRUS
Source organism: Coxsackievirus A10
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-28
Authors: Cui, Y., Peng, R., Song, H., Tong, Z., Gao, G.F., Qi, J.
PDB entry 7bzo: Cryo-EM structure of mature Coxsackievirus A10 at pH 5.5
Classification: VIRUS
Source organism: Coxsackievirus A10
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-04-28
Authors: Cui, Y., Peng, R., Song, H., Tong, Z., Gao, G.F., Qi, J.
PDB entry 7bzt: Cryo-EM structure of mature Coxsackievirus A10 in complex with KRM1 at pH 7.4
Classification: VIRUS
Source organism: Coxsackievirus A10; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-04-28
Authors: Cui, Y., Peng, R., Song, H., Tong, Z., Gao, G.F., Qi, J.
PDB entry 7bzu: Cryo-EM structure of mature Coxsackievirus A10 in complex with KRM1 at pH 5.5
Classification: VIRUS
Source organism: Coxsackievirus A10; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-04-28
Authors: Cui, Y., Peng, R., Song, H., Tong, Z., Gao, G.F., Qi, J.
PDB entry 7bzv: Crystal structure of 2-aminomuconic 6-semialdehyde dehydrogenase from Pseudomonas species AP-3
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.988 Å
Deposited: 2020-04-28
Authors: Shi, Q.L., Chen, Y.J., Su, D.
PDB entry 7bzw: Structure of Hsp21
Classification: CHAPERONE
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2020-04-28
Authors: Lau, W.C.Y.
PDB entry 7bzx: DXPS
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-04-28
Authors: Lau, W.C.Y.
PDB entry 7bzy: Hsp21-DXPS
Classification: TRANSFERASE/CHAPERONE
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-04-29
Authors: Lau, W.C.Y.
PDB entry 7bzz: Crystal structure of the SRCR domain of mouse SCARA5
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2020-04-29
Authors: Yu, B., He, Y.
PDB entry 7c00: Crystal structure of the SRCR domain of human SCARA5.
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-29
Authors: Yu, B., He, Y.
PDB entry 7c01: Molecular basis for a potent human neutralizing antibody targeting SARS-CoV-2 RBD
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2020-04-29
Authors: Shi, R., Qi, J., Wang, Q., Gao, F.G., Yan, J.
PDB entry 7c02: Crystal structure of dimeric MERS-CoV receptor binding domain
Classification: VIRAL PROTEIN
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2020-04-30
Authors: Dai, L., Qi, J., Gao, G.F.
PDB entry 7c03: Crystal structure of POLArISact(T57S), genetically encoded probe for fluorescent polarization
Classification: LUMINESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2020-04-30
Authors: Tomabechi, Y., Sakai, N., Shirouzu, M.
PDB entry 7c04: Crystal structure of human Trap1 with DN203492
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-30
Authors: Kim, D., Kim, D., Kim, S.Y., Lee, J.H., Kang, B.H., Kang, S., Lee, C.
PDB entry 7c05: Crystal structure of human Trap1 with DN203495
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2020-04-30
Authors: Kim, D., Kim, D., Kim, S.Y., Lee, J.H., Kang, B.H., Kang, S., Lee, C.
PDB entry 7c06: Crystal structure of yeast U2AF1 complex bound to 3' splice site RNA, 5'-UAGGU.
Classification: SPLICING/RNA
Source organism: Schizosaccharomyces pombe 972h-; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2020-04-30
Authors: Yoshida, H., Park, S.Y., Urano, T., Obayashi, E.
PDB entry 7c07: Crystal structure of yeast U2AF1 complex bound to 5'-AAGGU RNA.
Classification: SPLICING/RNA
Source organism: Schizosaccharomyces pombe 972h-; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-04-30
Authors: Yoshida, H., Park, S.Y., Urano, T., Obayashi, E.
PDB entry 7c08: Crystal structure of S34Y mutant of yeast U2AF1 complex bound to 3' splice site RNA, 5'-UAGGU.
Classification: SPLICING/RNA
Source organism: Schizosaccharomyces pombe 972h-; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2020-04-30
Authors: Yoshida, H., Park, S.Y., Urano, T., Obayashi, E.
PDB entry 7c09: Structure of lysozyme obtained in SSRF using serial crystallography
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-04-30
Authors: Zhao, F.Z.
PDB entry 7c0c: Crystal structure of Azospirillum brasilense L-2-keto-3-deoxyarabonate dehydratase (apo form)
Classification: LYASE
Source organism: Azospirillum brasilense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-05-01
Authors: Watanabe, Y., Nobuchi, R., Watanabe, S.
PDB entry 7c0d: Crystal structure of Azospirillum brasilense L-2-keto-3-deoxyarabonate dehydratase (Hydroxypyruvate-bound form)
Classification: LYASE
Source organism: Azospirillum brasilense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-05-01
Authors: Watanabe, Y., Watanabe, S.
PDB entry 7c0e: Crystal structure of Azospirillum brasilense L-2-keto-3-deoxyarabonate dehydratase (2-oxobutyrate-bound form)
Classification: LYASE
Source organism: Azospirillum brasilense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.204 Å
Deposited: 2020-05-01
Authors: Watanabe, Y., Ono, A., Watanabe, S.
PDB entry 7c0f: Crystal structure of a dinucleotide-binding protein of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form I)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M.
PDB entry 7c0g: Aca1 in complex with 14bp palindromic DNA target
Classification: TRANSCRIPTION
Source organism: Pseudomonas phage JBD30; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-05-01
Authors: Liu, Y.H., Zhang, L.S., Wu, B.X., Huang, H.D.
PDB entry 7c0i: Crystal structure of chimeric mutant of E3L in complex with Z-DNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Vaccinia virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-05-01
Authors: Choi, H.J., Park, C.H., Kim, J.S.
PDB entry 7c0j: Crystal structure of chimeric mutant of GH5 in complex with Z-DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Gallus gallus; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2020-05-01
Authors: Choi, H.J., Park, C.H.
PDB entry 7c0k: Crystal structure of a dinucleotide-binding protein of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form II)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M.
PDB entry 7c0l: Crystal structure of a dinucleotide-binding protein of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form III)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M.
PDB entry 7c0m: Human cGAS-nucleosome complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-05-01
Authors: Kujirai, T., Zierhut, C., Takizawa, Y., Kim, R., Negishi, L., Uruma, N., Hirai, S., Funabiki, H., Kurumizaka, H.
PDB entry 7c0n: Crystal structure of a self-assembling galactosylated peptide homodimer
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.552 Å
Deposited: 2020-05-01
Authors: He, C., Wu, S., Chi, C., Zhang, W., Ma, M., Lai, L., Dong, S.
PDB entry 7c0o: Crystal structure of a dinucleotide-binding protein (Y56F) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c0p: Structure of proteinase K obtained in SSRF using serial crystallography
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-05-01
Authors: Zhao, F.Z.
PDB entry 7c0q: a Legionella pneumophila effector Lpg2505
Classification: TOXIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-05-01
Authors: Chen, T.T., Han, A.D., Luo, Z.Q., McCloskey, A., Perri, K.
PDB entry 7c0r: Crystal structure of a dinucleotide-binding protein (F79A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form I)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c0s: Crystal structure of a dinucleotide-binding protein (F79A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form II)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c0t: Crystal structure of a dinucleotide-binding protein (N81A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c0u: Crystal structure of a dinucleotide-binding protein (S127A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c0v: Crystal structure of a dinucleotide-binding protein (Y224A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form I)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c0w: Crystal structure of a dinucleotide-binding protein (Y224A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form II)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c0x: Crystal structure of a dinucleotide-binding protein (T240A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c0y: Crystal structure of a dinucleotide-binding protein (Y246A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form I)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c0z: Crystal structure of a dinucleotide-binding protein (Y246A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form II)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-05-01
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c10: Dithiol cGrx1
Classification: OXIDOREDUCTASE
Source organism: Alkaliphilus oremlandii (strain OhILAs)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.806 Å
Deposited: 2020-05-02
Authors: Lee, K., Hwang, K.Y.
PDB entry 7c11: Formate--tetrahydrofolate ligase from Methylobacterium extorquens CM4 strain
Classification: LIGASE
Source organism: Methylorubrum extorquens (strain CM4 / NCIMB 13688)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.815 Å
Deposited: 2020-05-02
Authors: Kim, K.-J., Kim, S., Seo, H., Lee, S.
PDB entry 7c12: beta1 domain-swapped structure of monothiol cGrx1(C16S)
Classification: OXIDOREDUCTASE
Source organism: Alkaliphilus oremlandii (strain OhILAs)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.803 Å
Deposited: 2020-05-02
Authors: Lee, K., Hwang, K.Y.
PDB entry 7c13: beta1 domain-swapped structure of monothiol cGrx1(C16S)
Classification: OXIDOREDUCTASE
Source organism: Alkaliphilus oremlandii (strain OhILAs)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.799 Å
Deposited: 2020-05-02
Authors: Lee, K., Hwang, K.Y.
PDB entry 7c14: Crystal structure of a dinucleotide-binding protein (Q274A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form I)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-05-02
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c15: Crystal structure of a dinucleotide-binding protein (Q274A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form II)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-05-02
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c16: Crystal structure of a dinucleotide-binding protein (Y224A/Y246A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form I)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-05-02
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c17: The cryo-EM structure of E. coli CueR transcription activation complex with fully duplex promoter DNA
Classification: TRANSCRIPTION
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.22 Å
Deposited: 2020-05-02
Authors: Fang, C.L., Zhang, Y.
PDB entry 7c18: Crystal structure of FumaraseC from Mannheimia succiniciproducens in complex with Fumarate
Classification: LYASE
Source organism: Mannheimia succiniciproducens (strain MBEL55E)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2020-05-02
Authors: Kim, B., Lee, S.H., Kim, K.-J.
PDB entry 7c19: Crystal structure of a dinucleotide-binding protein (Y224A/Y246A) of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form II)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-05-02
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c1a: Crystal structure of FumaraseC (S319C) from Mannheimia succiniciproducens in complex with malate
Classification: LYASE
Source organism: Mannheimia succiniciproducens (strain MBEL55E)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.144 Å
Deposited: 2020-05-02
Authors: Kim, B., Lee, S.H., Kim, K.-J.
PDB entry 7c1b: Crystal structure of a dinucleotide-binding protein (F79A/Y224A/Y246A and deletion of residues 50-75) of ABC transporter (unbound form)
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-05-02
Authors: Kanaujia, S.P., Chandravanshi, M., Samanta, R.
PDB entry 7c1c: Crystal structure of FumaraseC from Mannheimia succiniciproducens
Classification: LYASE
Source organism: Mannheimia succiniciproducens (strain MBEL55E)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-05-02
Authors: Kim, B., Lee, S.H., Kim, K.-J.
PDB entry 7c1d: Cryo-EM structure of the hE46K cross-seeded hWT alpha-synuclein fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-05-03
Authors: Sun, Y.P., Zhao, K., Liu, C.
PDB entry 7c1e: Crystal structure of Kluyveromyces polyspora ADH (KpADH) mutant (Y127W)
Classification: OXIDOREDUCTASE
Source organism: Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-05-03
Authors: Wu, Y.F., Zhou, J.Y., Liu, Y.F., Xu, G.C., Ni, Y.
PDB entry 7c1h: Crystal structure of the starter condensation domain of rhizomide synthetase RzmA
Classification: BIOSYNTHETIC PROTEIN
Source organism: Paraburkholderia rhizoxinica HKI 454
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-05-04
Authors: Zhong, L., Diao, X., Zhang, N., Li, F.W., Zhou, H.B., Chen, H.N., Ren, X., Zhang, Y., Wu, D., Bian, X.
PDB entry 7c1i: Crystal structure of histidine-containing phosphotransfer protein B (HptB) from Pseudomonas aeruginosa PAO1
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-05-04
Authors: Chen, S.K., Guan, H.H., Wu, P.H., Lin, L.T., Wu, M.C., Chang, H.Y., Chen, N.C., Lin, C.C., Chuankhayan, P., Huang, Y.C., Lin, P.J., Chen, C.J.
PDB entry 7c1j: Crystal structure of the receiver domain of sensor histidine kinase PA1611 (PA1611REC) from Pseudomonas aeruginosa PAO1 with magnesium ion coordinated in the active site cleft
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2020-05-04
Authors: Chen, S.K., Guan, H.H., Wu, P.H., Lin, L.T., Wu, M.C., Chang, H.Y., Chen, N.C., Lin, C.C., Chuankhayan, P., Huang, Y.C., Lin, P.J., Chen, C.J.
PDB entry 7c1k: Crystal structure of the starter condensation domain of rhizomide synthetase RzmA mutant R148A
Classification: BIOSYNTHETIC PROTEIN
Source organism: Paraburkholderia rhizoxinica HKI 454
Experimental method: X-RAY DIFFRACTION
Resolution: 2.755 Å
Deposited: 2020-05-04
Authors: Zhong, L., Diao, X., Zhang, N., Li, F.W., Zhou, H.B., Chen, H.N., Ren, X., Zhang, Y., Wu, D., Bian, X.
PDB entry 7c1l: Crystal structure of the starter condensation domain of rhizomide synthetase RzmA mutant R148A in complex with C8-CoA
Classification: BIOSYNTHETIC PROTEIN
Source organism: Paraburkholderia rhizoxinica HKI 454
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-05-05
Authors: Zhong, L., Diao, X., Zhang, N., Li, F.W., Zhou, H.B., Chen, H.N., Ren, X., Zhang, Y., Wu, D., Bian, X.
PDB entry 7c1m: Complex structure of tyrosinated alpha-tubulin carboxy-terminal peptide and A1aY1 binder
Classification: PROTEIN BINDING
Source organism: Saccharolobus solfataricus 98/2; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2020-05-05
Authors: Kesarwani, S., Reddy, P.P., Sirajuddin, M., Das, R.
PDB entry 7c1o: Crystal structure of Aquifex aeolicus Era Y63A bound to GDP.AlF4-
Classification: HYDROLASE
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2020-05-05
Authors: Batra, S., Prakash, B.
PDB entry 7c1p: Crystal structure of the starter condensation domain of the rhizomide synthetase RzmA mutant H140V, R148A
Classification: BIOSYNTHETIC PROTEIN
Source organism: Paraburkholderia rhizoxinica HKI 454
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-05-05
Authors: Zhong, L., Diao, X., Zhang, N., Li, F.W., Zhou, H.B., Chen, H.N., Ren, X., Zhang, Y., Wu, D.
PDB entry 7c1r: Crystal structure of the starter condensation domain of rhizomide synthetase RzmA mutant H140A/R148A in complex with C8-CoA
Classification: BIOSYNTHETIC PROTEIN
Source organism: Paraburkholderia rhizoxinica HKI 454
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2020-05-05
Authors: Zhong, L., Diao, X., Zhang, N., Li, F.W., Zhou, H.B., Chen, H.N., Ren, X., Zhang, Y., Wu, D., Bian, X.
PDB entry 7c1s: Crystal structure of the starter condensation domain of rhizomide synthetase RzmA mutant H140A/R148A in complex with C8-CoA and Leu-SNAC
Classification: BIOSYNTHETIC PROTEIN
Source organism: Paraburkholderia rhizoxinica HKI 454
Experimental method: X-RAY DIFFRACTION
Resolution: 2.586 Å
Deposited: 2020-05-05
Authors: Zhong, L., Diao, X., Zhang, N., Li, F.W., Zhou, H.B., Chen, H.N., Ren, X., Zhang, Y., Wu, D., Bian, X.
PDB entry 7c1u: Crystal structure of the starter condensation domain of rhizomide synthetase RzmA mutant H140V/R148A in a ""product-released"" conformation
Classification: BIOSYNTHETIC PROTEIN
Source organism: Paraburkholderia rhizoxinica HKI 454
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-05-05
Authors: Zhong, L., Diao, X., Zhang, N., Li, F.W., Zhou, H.B., Chen, H.N., Ren, X., Zhang, Y., Wu, D., Bian, X.
PDB entry 7c1x: Unliganded structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
Classification: RNA
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38943 Å
Deposited: 2020-05-06
Authors: Kim, S.H., Rhee, S.
PDB entry 7c1y: Pseudouridine and ADP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
Classification: RNA
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08343 Å
Deposited: 2020-05-06
Authors: Kim, S.H., Rhee, S.
PDB entry 7c1z: ATP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
Classification: RNA
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09617 Å
Deposited: 2020-05-06
Authors: Kim, S.H., Rhee, S.
PDB entry 7c20: Crystal structure of Rabies virus (Nishigahara strain) phosphoprotein C-terminal domain (K214A)
Classification: VIRAL PROTEIN
Source organism: Rabies virus (strain Nishigahara RCEH)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-05-06
Authors: Nomai, T., Maenaka, K., Ose, T.
PDB entry 7c21: Crystal structure of Duvenhage virus phosphoprotein C-terminal domain
Classification: VIRAL PROTEIN
Source organism: Duvenhage virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-05-06
Authors: Sugiyama, A., Jiang, X., Maenaka, K., Yao, M., Ose, T.
PDB entry 7c22: Crystal structure of the C-terminal domain of SARS-CoV-2 nucleocapsid protein
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-05-07
Authors: Zhou, R.J., Zeng, R., Lei, J.
PDB entry 7c23: Crystal structure of CrmE10, a SGNH-hydrolase family esterase
Classification: HYDROLASE
Source organism: Croceicoccus marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-05-07
Authors: Li, Z., Li, J.
PDB entry 7c24: Glycosidase F290Y at pH8.0
Classification: HYDROLASE
Source organism: Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2020-05-07
Authors: Tagami, T., Kikuchi, A., Okuyama, M., Kimura, A.
PDB entry 7c25: Glycosidase Wild Type at pH8.0
Classification: HYDROLASE
Source organism: Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.505 Å
Deposited: 2020-05-07
Authors: Tagami, T., Kikuchi, A., Okuyama, M., Kimura, A.
PDB entry 7c26: Glycosidase Wild Type at pH4.5
Classification: HYDROLASE
Source organism: Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.803 Å
Deposited: 2020-05-07
Authors: Tagami, T., Kikuchi, A., Okuyama, M., Kimura, A.
PDB entry 7c27: Glycosidase F290Y at pH4.5
Classification: HYDROLASE
Source organism: Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2020-05-07
Authors: Tagami, T., Kikuchi, A., Okuyama, M., Kimura, A.
PDB entry 7c28: Unusual quaternary structure of a homodimeric synergistic toxin from mamba snake venom
Classification: TOXIN
Source organism: Dendroaspis jamesoni kaimosae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-05-07
Authors: Jobichen, C., Narumi, A., Sivaraman, J., Kini, R.M.
PDB entry 7c29: Esterase CrmE10 mutant-D178A
Classification: HYDROLASE
Source organism: Croceicoccus marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2020-05-07
Authors: Li, Z., Li, J.
PDB entry 7c2a: Crystal structure of AlinE4, a SGNH-hydrolase family esterase
Classification: HYDROLASE
Source organism: Altererythrobacter indicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2020-05-07
Authors: Li, Z., Li, J.
PDB entry 7c2b: Crystal structure of ferredoxin: thioredoxin reductase and thioredoxin f2 complex
Classification: ELECTRON TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7949 Å
Deposited: 2020-05-07
Authors: Kurisu, G., Juniar, L., Tanaka, H.
PDB entry 7c2c: Esterase AlinE4 mutant, D162A
Classification: HYDROLASE
Source organism: Altererythrobacter indicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-05-07
Authors: Li, Z., Li, J.
PDB entry 7c2d: Esterase AlinE4 mutant-S13A
Classification: HYDROLASE
Source organism: Altererythrobacter indicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-05-07
Authors: Li, Z., Li, J.
PDB entry 7c2e: GLP-1R-Gs complex structure with a small molecule full agonist
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-05-07
Authors: Ma, H., Yuan, D.P., Huang, W., Wenge, Z., Xu, E.
PDB entry 7c2f: Crystal Structure of the Thorarchaeota ProGel/rabbit actin complex
Classification: STRUCTURAL PROTEIN
Source organism: Candidatus Thorarchaeota archaeon SMTZ1-83; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2020-05-07
Authors: Robinson, R.C., Akil, C.