LiteFold/PDB huggingface dataset:
PDB entry 6ykc: Metala-Carborane di-ethyl-sulfonamide (trans isomer) in complex with CA IX mimic
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-04-06
Authors: Kugler, M., Brynda, J., Pospisilova, K., Rezacova, P.
PDB entry 6ykd: Human Pim-1 kinase in complex with an inhibitor identified by virtual screening
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2020-04-06
Authors: Schneider, P., Welin, M., Svensson, B., Walse, B., Schneider, G.
PDB entry 6yke: Crystal structure of YTHDC1 with compound DHU_DC1_038
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2020-04-06
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ykf: VcaM4I restriction endonuclease in the presence of 5mC-modified ssDNA
Classification: HYDROLASE
Source organism: synthetic construct; Vibrio campbellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2020-04-06
Authors: Pastor, M., Czapinska, H., Lutz, T., Helbrecht, I., Xu, S., Bochtler, M.
PDB entry 6ykg: Structure-based exploration of selectivity for ATM inhibitors in Huntingtons disease
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2020-04-06
Authors: Van de Poel, A., Leonard, P.M., Lamers, M.B.A.C.
PDB entry 6ykh: Metala-Carborane di-ethyl-sulfonamide (cis isomer) in complex with CA IX mimic
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2020-04-06
Authors: Kugler, M., Brynda, J., Pospisilova, K., Rezacova, P.
PDB entry 6yki: Crystal structure of YTHDC1 with compound DHU_DC1_092
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-04-06
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ykj: Crystal structure of YTHDC1 with compound DHU_DC1_125
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-06
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ykk: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 15
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.236 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6ykl: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11k
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6ykm: Structure of C. jejuni MotAB
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-06
Authors: Santiveri, M., Roa-Eguiara, A., Taylor, N.M.I.
PDB entry 6ykn: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11b
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6yko: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11a
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6ykp: Structure of unplugged C. jejuni MotAB
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2020-04-06
Authors: Santiveri, M., Roa-Eguiara, A., Taylor, N.M.I.
PDB entry 6ykq: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11c
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6ykr: Structure of a protonation mimic of unplugged C. jejuni MotAB
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-04-06
Authors: Santiveri, M., Roa-Eguiara, A., Taylor, N.M.I.
PDB entry 6yks: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11d
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6ykt: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11e
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6yku: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11f
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6ykv: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11g
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6ykw: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11h
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6ykx: Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11j
Classification: LIGASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2020-04-06
Authors: Pang, L., Strelkov, S.V., Weeks, S.D.
PDB entry 6yky: Biochemical, Cellular and Structural Characterization of Novel ERK3 Inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2020-04-06
Authors: Graedler, U.
PDB entry 6ykz: Crystal structure of YTHDC1 with compound DHU_DC1_234
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-04-06
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6yl0: Crystal structure of YTHDC1 with compound T_96
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-04-06
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6yl1: Cdk2(F80C) with Covalent Adduct TK37 at F80C
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2020-04-06
Authors: Craven, G., Morgan, R.M.L., Mann, D.J.
PDB entry 6yl2: Structural and DNA binding studies of the transcriptional repressor Rv2506 (BkaR) from Mycobacterium tuberculosis supports a role in L-Leucine catabolism
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2020-04-06
Authors: Keep, N.H., Pritchard, J.E., Sula, A., Cole, A.R., Kendall, S.L.
PDB entry 6yl3: High resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica
Classification: METAL BINDING PROTEIN
Source organism: Yersinia enterocolitica W22703
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.98 Å
Deposited: 2020-04-06
Authors: Righetto, R.D., Anton, L., Adaixo, R., Jakob, R., Zivanov, J., Mahi, M.A., Ringler, P., Schwede, T., Maier, T., Stahlberg, H.
PDB entry 6yl4: Soluble epoxide hydrolase in complex with 3-((R)-3-(1-hydroxyureido)but-1-yn-1-yl)-N-((S)-3-phenyl-3-(4-trifluoromethoxy)phenyl)propyl)benzamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2020-04-06
Authors: Kramer, J.S., Pogoryelov, D., Hiesinger, K., Proschak, E.
PDB entry 6yl5: Crystal structure of the SAM-SAH riboswitch with SAH
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-06
Authors: Huang, L., Lilley, D.M.J.
PDB entry 6yl6: Cdk2(F80C)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-06
Authors: Craven, G., Morgan, R.M.L., Mann, D.J.
PDB entry 6yl7: Crystal structure of beta carbonic anhydrase from the pathogenic bacterium Burkholderia pseudomallei
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 3.17 Å
Deposited: 2020-04-06
Authors: Angeli, A., Ferraroni, M.
PDB entry 6yl8: Crystal structure of YTHDC1 with compound DHU_DC1_011
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-06
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6yl9: Crystal structure of YTHDC1 with compound DHU_DC1_085
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-06
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6yla: Crystal structure of the SARS-CoV-2 receptor binding domain in complex with CR3022 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2020-04-06
Authors: Huo, J., Zhao, Y., Ren, J., Zhou, D., Ginn, H.M., Fry, E.E., Owens, R., Stuart, D.I.
PDB entry 6ylb: Crystal structure of the SAM-SAH riboswitch with SAM
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2020-04-07
Authors: Huang, L., Lilley, D.M.J.
PDB entry 6ylc: Biochemical, Cellular and Structural Characterization of Novel ERK3 Inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2020-04-07
Authors: Graedler, U.
PDB entry 6yld: Crystal structure of Trichoplax adhaerens trBcl-2L2 bound to trBak BH3
Classification: APOPTOSIS
Source organism: Trichoplax sp. H2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-04-07
Authors: D Sa, J., Banjara, S., Kvansakul, M.
PDB entry 6yle: Rix1-Rea1 pre-60S particle - Rix1-subcomplex, body 3 (rigid body refinement)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-04-07
Authors: Kater, L., Beckmann, R.
PDB entry 6ylf: Rix1-Rea1 pre-60S particle - Rea1, body 3 (rigid body refinement, composite structure of Rea1 ring and tail)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-04-07
Authors: Kater, L., Beckmann, R.
PDB entry 6ylg: Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-04-07
Authors: Kater, L., Beckmann, R.
PDB entry 6ylh: Rix1-Rea1 pre-60S particle - full composite structure
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-07
Authors: Kater, L., Beckmann, R.
PDB entry 6yli: Crystal structure of human bcl-xL bound to trichoplax adhaerens trBak BH3
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-04-07
Authors: D Sa, J., Banjara, S., Kvansakul, M.
PDB entry 6ylj: Structure of D169A/E171A double mutant of chitinase Chit42 from Trichoderma harzianum complexed with chitinhexaose.
Classification: HYDROLASE
Source organism: Trichoderma harzianum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-04-07
Authors: Jimenez-Ortega, E., Sanz-Aparicio, J.
PDB entry 6ylk: Cdk2(F80C) with Covalent Adduct TK22 at F80C
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-04-07
Authors: Craven, G., Morgan, R.M.L., Mann, D.J.
PDB entry 6yll: Biochemical, Cellular and Structural Characterization of Novel ERK3 Inhibitors
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2020-04-07
Authors: Graedler, U.
PDB entry 6ylm: mCherry
Classification: FLUORESCENT PROTEIN
Source organism: Discosoma sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-07
Authors: Myskova, J., Rybakova, M., Brynda, J., Lazar, J.
PDB entry 6yln: mTurquoise2 SG P212121 - Directional optical properties of fluorescent proteins
Classification: FLUORESCENT PROTEIN
Source organism: Vaccinia virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-04-07
Authors: Myskova, J., Rybakova, O., Brynda, J., Lazar, J.
PDB entry 6ylo: mTurquoise2 - Directionality of Optical Properties of Fluorescent Proteins
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-07
Authors: Myskova, J., Rybakova, O., Brynda, J., Lazar, J.
PDB entry 6ylp: EGFP_in_Acidic_env Directionality of Optical Properties of Fluorescent Proteins
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-04-07
Authors: Myskova, J., Rybakova, O., Brynda, J., Lazar, J.
PDB entry 6ylq: EGFP in neutral pH, Directionality of Optical Properties of Fluorescent Proteins
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-04-07
Authors: Myskova, J., Rybakova, M., Brynda, J., Lazar, J.
PDB entry 6ylr: Translation initiation factor 4E in complex with bn7GpppG mRNA 5' cap analog
Classification: TRANSLATION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19545 Å
Deposited: 2020-04-07
Authors: Kubacka, D., Wojcik, R., Baranowski, M.R., Warminski, M., Kowalska, J., Jemielity, J.
PDB entry 6yls: mEos4b - Directionality of Optical Properties of Fluorescent Proteins
Classification: FLUORESCENT PROTEIN
Source organism: Lobophyllia hemprichii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-04-07
Authors: Myskova, J., Rybakova, O., Brynda, J., Lazar, J.
PDB entry 6ylt: Translation initiation factor 4E in complex with 3-MeBn7GpppG mRNA 5' cap analog
Classification: TRANSLATION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2020-04-07
Authors: Kubacka, D., Wojcik, R., Baranowski, M.R., Kowalska, J., Jemielity, J.
PDB entry 6ylu: 14-3-3sigma in complex with BLNKpT152 phosphopeptide crystal structure
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2020-04-07
Authors: Soini, L., Leysen, S., Davis, J., Ottmann, C.
PDB entry 6ylv: Translation initiation factor 4E in complex with 4-Cl-Bn7GpppG mRNA 5' cap analog
Classification: TRANSLATION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66006 Å
Deposited: 2020-04-07
Authors: Kubacka, D., Wojcik, R., Baranowski, M.R., Kowalska, J., Jemielity, J.
PDB entry 6ylx: pre-60S State NE1 (TAP-Flag-Nop53)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-04-07
Authors: Kater, L., Beckmann, R.
PDB entry 6yly: pre-60S State NE2 (TAP-Flag-Nop53)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-04-07
Authors: Kater, L., Beckmann, R.
PDB entry 6ylz: X-ray structure of the K72I,Y129F,R133L, H199A quadruple mutant of PNP-oxidase from E. coli
Classification: FLAVOPROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.558 Å
Deposited: 2020-04-07
Authors: Battista, T., Sularea, M., Barile, A., Fiorillo, A., Tramonti, A., Ilari, A.
PDB entry 6ym0: Crystal structure of the SARS-CoV-2 receptor binding domain in complex with CR3022 Fab (crystal form 1)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 4.36 Å
Deposited: 2020-04-07
Authors: Huo, J., Zhao, Y., Ren, J., Zhou, D., Ginn, H.M., Fry, E.E., Owens, R., Stuart, D.I.
PDB entry 6ym1: Mycobacterium tuberculosis FtsZ in complex with GDP
Classification: ANTIBIOTIC
Source organism: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-07
Authors: Alnami, A.T., Norton, R.S., Pena, H.P., Haider, M., kozielski, F.
PDB entry 6ym2: Crystal structure of YTHDC1 with compound ADO_AC_25
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-07
Authors: Bedi, R.K., Li, Y., Dolbois, A., Wiedmer, L., Caflisch, A.
PDB entry 6ym3: Crystal structure of Compound 1 with PIP4K2A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-04-07
Authors: Holton, S.J., Wortmann, L., Braeuer, N., Irlbacher, H., Weiske, J., Lechner, C., Meier, R., Puetter, V., Christ, C., ter Laak, T., Lienau, P., Lesche, R., Nicke, B., Bauser, M., Haegebarth, A., von Nussbaum, F., Mumberg, D., Lemos, C.
PDB entry 6ym4: Crystal structure of BAY-297 with PIP4K2A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-04-07
Authors: Holton, S.J., Wortmann, L., Braeuer, N., Irlbacher, H., Weiske, J., Lechner, C., Meier, R., Puetter, V., Christ, C., ter Laak, T., Lienau, P., Lesche, R., Nicke, B., Bauser, M., Haegebarth, A., von Nussbaum, F., Mumberg, D., Lemos, C.
PDB entry 6ym5: Crystal structure of BAY-091 with PIP4K2A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-04-07
Authors: Holton, S.J., Wortmann, L., Braeuer, N., Irlbacher, H., Weiske, J., Lechner, C., Meier, R., Puetter, V., Christ, C., ter Laak, T., Lienau, P., Lesche, R., Nicke, B., Bauser, M., Haegebarth, A., von Nussbaum, F., Mumberg, D., Lemos, C.
PDB entry 6ym8: Crystal structure of YTHDC1 with compound YLI_DC1_002
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-07
Authors: Bedi, R.K., Li, Y., Wiedmer, L., Caflisch, A.
PDB entry 6ym9: Mycobacterium tuberculosis FtsZ in complex with GTP-gamma-S
Classification: CELL CYCLE
Source organism: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2020-04-08
Authors: Alnami, A.T., Norton, R.S., Pena, H.P., Haider, M., kozielski, F.
PDB entry 6yma: MicroED structure of acetazolamide-bound human carbonic anhydrase II
Classification: LYASE
Source organism: Homo sapiens
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.5 Å
Deposited: 2020-04-08
Authors: Clabbers, M.T.B., Fisher, S.Z., Coincon, M., Zou, X., Xu, H.
PDB entry 6ymb: MicroED structure of human carbonic anhydrase II
Classification: LYASE
Source organism: Homo sapiens
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.5 Å
Deposited: 2020-04-08
Authors: Clabbers, M.T.B., Fisher, S.Z., Coincon, M., Zou, X., Xu, H.
PDB entry 6ymc: 26-mer stem-loop RNA
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-08
Authors: Janowski, R., Niessing, D.
PDB entry 6ymd: Crystal structure of serine hydroxymethyltransferase from Aphanothece halophytica in the covalent complex with malonate
Classification: TRANSFERASE
Source organism: Aphanothece halophytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-04-08
Authors: Ruszkowski, M., Sekula, B., Nogues, I., Tramonti, A., Angelaccio, S., Contestabile, R.
PDB entry 6yme: Crystal structure of serine hydroxymethyltransferase from Aphanothece halophytica in the PLP-internal aldimine state
Classification: TRANSFERASE
Source organism: Aphanothece halophytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-04-08
Authors: Ruszkowski, M., Sekula, B., Nogues, I., Tramonti, A., Angelaccio, S., Contestabile, R.
PDB entry 6ymf: Crystal structure of serine hydroxymethyltransferase from Aphanothece halophytica in the PLP-Serine external aldimine state
Classification: TRANSFERASE
Source organism: Aphanothece halophytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2020-04-08
Authors: Ruszkowski, M., Sekula, B., Nogues, I., Tramonti, A., Angelaccio, S., Contestabile, R.
PDB entry 6ymg: VcaM4I restriction endonuclease in complex with 5mC-modified dsDNA
Classification: HYDROLASE
Source organism: synthetic construct; Vibrio campbellii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2020-04-08
Authors: Pastor, M., Czapinska, H., Lutz, T., Helbrecht, I., Xu, S., Bochtler, M.
PDB entry 6ymh: X-ray structure of the K72I, Y129F, R133L, H199A quadruple mutant of PNP-oxidase from E. coli in complex with PLP
Classification: FLAVOPROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.417 Å
Deposited: 2020-04-08
Authors: Battista, T., Sularea, M., Barile, A., Fiorillo, A., Tramonti, A., Ilari, A.
PDB entry 6ymi: Crystal structure of the SAM-SAH riboswitch with AMP.
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-04-08
Authors: Huang, L., Lilley, D.M.J.
PDB entry 6ymj: Crystal structure of the SAM-SAH riboswitch with adenosine.
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2020-04-08
Authors: Huang, L., Lilley, D.M.J.
PDB entry 6ymk: Crystal structure of the SAM-SAH riboswitch with AMP
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2020-04-08
Authors: Huang, L., Lilley, D.M.J.
PDB entry 6yml: Crystal structure of the SAM-SAH riboswitch with decarboxylated SAH
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2020-04-08
Authors: Huang, L., Lilley, D.M.J.
PDB entry 6ymm: Crystal structure of the SAM-SAH riboswitch with SAM from space group P312
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-04-08
Authors: Huang, L., Lilley, D.M.J.
PDB entry 6ymn: Crystal structure of the Diels Alderase AbmU from Streptomyces koyangensis
Classification: LIGASE
Source organism: Streptomyces koyangensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-04-09
Authors: Back, C.R., Burton, N., Race, P.R.
PDB entry 6ymo: Binary complex of 14-3-3 zeta with Glucocorticoid Receptor (GR) pS617 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2020-04-09
Authors: Munier, C.C., Edman, K., Perry, M.W.D., Ottmann, C.
PDB entry 6ymp: Thrombin in complex with 3-((5-(tert-butyl)isoxazol-3-yl)methyl)oxetan-3-amine (j54)
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2020-04-09
Authors: Scanlan, W., Heine, A., Klebe, G., Abazi, N.
PDB entry 6ymq: TREM2 extracellular domain (19-131) in complex with single-chain variable 4 (scFv-4)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2020-04-09
Authors: Szykowska, A., Preger, C., Scacioc, A., Mukhopadhyay, S.M.M., McKinley, G., Graslund, S., Wigren, E., Persson, H., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Di Daniel, E., Davis, J.B., Burgess-Brown, N., Bullock, A.
PDB entry 6ymr: Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-09
Authors: Kljajic, M., Heine, A., Klebe, G.
PDB entry 6yms: Structural and Kinetic Evaluation of Phosphoramidate Inhibitors on Thermolysin
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2020-04-09
Authors: Kljajic, M., Heine, A., Klebe, G.
PDB entry 6ymt: RNASE 3/1 version1
Classification: HYDROLASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-04-09
Authors: Fernandez-Millan, P., Prats-Ejarque, G., Vazquez-Monteagudo, S., Boix, E.
PDB entry 6ymu: Imidazole Glycerol Phosphate Synthase
Classification: ISOMERASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2020-04-09
Authors: Sterner, R., Rajendran, C., Andrea, K.
PDB entry 6ymv: Cryo-EM structure of yeast mitochondrial RNA polymerase partially-melted transcription initiation complex (PmIC)
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-10
Authors: Das, K., Patel, S.S.
PDB entry 6ymw: Cryo-EM structure of yeast mitochondrial RNA polymerase transcription initiation complex
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2020-04-10
Authors: Das, K., Patel, S.S.
PDB entry 6ymx: CIII2/CIV respiratory supercomplex from Saccharomyces cerevisiae
Classification: ELECTRON TRANSPORT
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2020-04-10
Authors: Berndtsson, J., Rathore, S., Ott, M.
PDB entry 6ymy: Cytochrome c oxidase from Saccharomyces cerevisiae
Classification: ELECTRON TRANSPORT
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2020-04-10
Authors: Berndtsson, J., Rathore, S., Ott, M.
PDB entry 6ymz: Structure of the CheB methylsterase from P. atrosepticum SCRI1043
Classification: HYDROLASE
Source organism: Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-04-10
Authors: Gavira, J.A., Krell, T., Velando-Soriano, F., Matilla, M.A.
PDB entry 6yn0: Structure of E. coli PBP1b with a FtsN peptide activating transglycosylase activity
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-04-10
Authors: Kerff, F., Terrak, M., Boes, A., Herman, H., Charlier, P.
PDB entry 6yn1: Crystal structure of histone chaperone APLF acidic domain bound to the histone H2A-H2B-H3-H4 octamer
Classification: CHAPERONE
Source organism: Homo sapiens; Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-04-10
Authors: Corbeski, I., Guo, X., Van Ingen, H., Sixma, T.K.
PDB entry 6yn2: Crystal structure of Renilla reniformis luciferase variant RLuc8-W121F/E144Q in complex with a coelenteramide (the postcatalytic enzyme-product complex)
Classification: LUMINESCENT PROTEIN
Source organism: Renilla reniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-04-10
Authors: Damborsky, J., Marek, M.
PDB entry 6yn3: Thrombin in complex with 4-hydroxybenzamide (j89)
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2020-04-10
Authors: Scanlan, W., Heine, A., Klebe, G., Abazi, N.
PDB entry 6yn4: Structure of D169A/E171A double mutant of chitinase Chit42 from Trichoderma harzianum complexed with chitintetraose.
Classification: HYDROLASE
Source organism: Trichoderma harzianum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2020-04-10
Authors: Jimenez-Ortega, E., Sanz-Aparicio, J.
PDB entry 6yn5: Inducible lysine decarboxylase LdcI decamer, pH 7.0
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-04-10
Authors: Jessop, M., Felix, J., Desfosses, A., Effantin, G., Gutsche, I.
PDB entry 6yn6: Inducible lysine decarboxylase LdcI stacks, pH 5.7
Classification: LYASE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2020-04-10
Authors: Felix, J., Jessop, M., Desfosses, A., Effantin, G., Gutsche, I.
PDB entry 6yn7: Crystal Structure of AHE enzyme from Alicyclobacillus herbarius
Classification: HYDROLASE
Source organism: Alicyclobacillus herbarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-04-11
Authors: Gourlay, L.J., Di Pisa, F.
PDB entry 6yn8: Human MALT1(334-719) in complex with a tetrazole containing compound
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.052 Å
Deposited: 2020-04-11
Authors: Renatus, M.
PDB entry 6yn9: MALT1(329-728) in complex with a sulfonamide containing compound
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.558 Å
Deposited: 2020-04-11
Authors: Renatus, M.
PDB entry 6yna: Crystal structure of cAMP-dependent Protein Kinase (PKA) in complex with Fasudil (M77, soaked)
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2020-04-13
Authors: Oebbeke, M., Wienen-Schmidt, B., Heine, A., Klebe, G.
PDB entry 6ynb: Crystal structure of cAMP-dependent Protein Kinase (PKA) in complex with short-chain Fasudil-derivative N-(2-aminoethyl)isoquinoline-5-sulfonamide (soaked)
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2020-04-13
Authors: Oebbeke, M., Wienen-Schmidt, B., Heine, A., Klebe, G.
PDB entry 6ync: Crystal structure of cAMP-dependent Protein Kinase (PKA) in complex with the methylated Fasudil-derived fragment N-methylisoquinoline-5-sulfonamide (soaked)
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-04-13
Authors: Oebbeke, M., Wienen-Schmidt, B., Heine, A., Klebe, G.
PDB entry 6ynd: GAPDH purified from the supernatant of HEK293F cells: crystal form 1 of 4.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.525 Å
Deposited: 2020-04-13
Authors: Roversi, P., Lia, A.
PDB entry 6yne: GAPDH purified from the supernatant of HEK293F cells: crystal form 2 of 4.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.853 Å
Deposited: 2020-04-13
Authors: Roversi, P., Lia, A.
PDB entry 6ynf: GAPDH purified from the supernatant of HEK293F cells: crystal form 3 of 4.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.394 Å
Deposited: 2020-04-13
Authors: Roversi, P., Lia, A.
PDB entry 6yng: MicroED structure of granulin determined from five native nanocrystalline granulovirus occlusion bodies
Classification: VIRAL PROTEIN
Source organism: Cydia pomonella granulosis virus (isolate Mexico/1963)
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.8 Å
Deposited: 2020-04-13
Authors: Bunker, R.D.
PDB entry 6ynh: GAPDH purified from the supernatant of HEK293F cells: crystal form 4 of 4
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.621 Å
Deposited: 2020-04-13
Authors: Roversi, P., Lia, A.
PDB entry 6yni: Crystal structure of YTHDC1 with compound DHU_DC1_036
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2020-04-13
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ynj: Crystal structure of YTHDC1 with compound DHU_DC1_046
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-13
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ynk: Crystal structure of YTHDC1 with compound DHU_DC1_068
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-04-13
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ynl: Crystal structure of YTHDC1 with compound DHU_DC1_078
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-14
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ynm: Crystal structure of YTHDC1 with compound DHU_DC1_096
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-14
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ynn: Crystal structure of YTHDC1 with compound DHU_DC1_135
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-04-14
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6yno: Crystal structure of YTHDC1 with compound DHU_DC1_139
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-04-14
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ynp: Crystal structure of YTHDC1 with compound T96C1
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2020-04-14
Authors: Bedi, R.K., Huang, D., Wiedmer, L., Caflisch, A.
PDB entry 6ynq: Structure of SARS-CoV-2 Main Protease bound to 2-Methyl-1-tetralone.
Classification: PEPTIDE BINDING PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-04-14
Authors: Guenther, S., Reinke, P., Oberthuer, D., Yefanov, O., Gelisio, L., Ginn, H., Lieske, J., Domaracky, M., Brehm, W., Rahmani Mashour, A., White, T.A., Knoska, J., Pena Esperanza, G., Koua, F., Tolstikova, A., Groessler, M., Fischer, P., Hennicke, V., Fleckenstein, H., Trost, F., Galchenkova, M., Gevorkov, Y., Li, C., Awel, S., Paulraj, L.X., Ullah, N., Falke, S., Alves Franca, B., Schwinzer, M., Brognaro, H., Werner, N., Perbandt, M., Tidow, H., Seychell, B., Beck, T., Meier, S., Doyle, J.J., Giseler, H., Melo, D., Dunkel, I., Lane, T.J., Peck, A., Saouane, S., Hakanpaeae, J., Meyer, J., Noei, H., Gribbon, P., Ellinger, B., Kuzikov, M., Wolf, M., Zhang, L., Ehrt, C., Pletzer-Zelgert, J., Wollenhaupt, J., Feiler, C., Weiss, M., Schulz, E.C., Mehrabi, P., Norton-Baker, B., Schmidt, C., Lorenzen, K., Schubert, R., Han, H., Chari, A., Fernandez Garcia, Y., Turk, D., Hilgenfeld, R., Rarey, M., Zaliani, A., Chapman, H.N., Pearson, A., Betzel, C., Meents, A.
PDB entry 6ynr: Crystal structure of the cAMP-dependent protein kinase A in complex with 1,7-Naphthyridin-8-amine (soaked) and PKI (5-24)
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-04-14
Authors: Oebbeke, M., Heine, A., Klebe, G.
PDB entry 6yns: CaM-P458 complex (crystal form 2)
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.94 Å
Deposited: 2020-04-14
Authors: Mechaly, A.E., Voegele, A., Haouz, A., Chenal, A.
PDB entry 6ynt: Crystal structure of the cAMP-dependent protein kinase A in complex with aminofasudil and PKI (5-24)
Classification: TRANSFERASE
Source organism: Cricetulus griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2020-04-14
Authors: Oebbeke, M., Gerber, H.-D., Heine, A., Klebe, G.
PDB entry 6ynu: CaM-P458 complex (crystal form 1)
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2020-04-14
Authors: Mechaly, A.E., Voegele, A., Haouz, A., Chenal, A.
PDB entry 6ynv: Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - Fo-wing region
Classification: MEMBRANE PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-04-14
Authors: Kock Flygaard, R., Muhleip, A., Amunts, A.
PDB entry 6ynw: Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - central stalk/cring
Classification: MEMBRANE PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-14
Authors: Kock Flygaard, R., Muhleip, A., Amunts, A.
PDB entry 6ynx: Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - Fo-subcomplex
Classification: MEMBRANE PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2020-04-14
Authors: Kock Flygaard, R., Muhleip, A., Amunts, A.
PDB entry 6yny: Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - F1Fo composite dimer model
Classification: MEMBRANE PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-04-14
Authors: Kock Flygaard, R., Muhleip, A., Amunts, A.
PDB entry 6ynz: Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - F1Fo composite tetramer model
Classification: MEMBRANE PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-14
Authors: Kock Flygaard, R., Muhleip, A., Amunts, A.
PDB entry 6yo0: Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - F1/peripheral stalk
Classification: MEMBRANE PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-04-14
Authors: Kock Flygaard, R., Muhleip, A., Amunts, A.
PDB entry 6yo1: Crystal structure of ribonuclease A solved by vanadium SAD phasing
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-04-14
Authors: El Omari, K., Mohamad, N., Bountra, K., Duman, R., Romano, M., Schlegel, K., Kwong, H., Mykhaylyk, V., Olesen, C.E., Moller, J.V., Bublitz, M., Beis, K., Wagner, A.
PDB entry 6yo2: Meta-Carborane propyl-sulfonamide in complex with CA IX mimic
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-04-14
Authors: Kugler, M., Brynda, J., Pospisilova, K., Rezacova, P.
PDB entry 6yo3: LecA from Pseudomonas aeruginosa in complex with a catechol CAS no. 67984-81-0
Classification: SUGAR BINDING PROTEIN
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-04-14
Authors: Kuhaudomlarp, S., Imberty, A., Titz, A.
PDB entry 6yo4: Para-Carborane propyl-sulfonamide in complex with CA IX mimic
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-14
Authors: Kugler, M., Brynda, J., Pospisilova, K., Rezacova, P.
PDB entry 6yo5: Crystal structure of the M295F variant of Ssl1
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sviceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-14
Authors: Mielenbrink, S., Olbrich, A., Urlacher, V., Span, I.
PDB entry 6yo6: Structure of iC3b1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 6 Å
Deposited: 2020-04-14
Authors: Jensen, R.K., Andersen, G.R.
PDB entry 6yo7: Ortho-Carborane di-propyl-sulfonamide in complex with CA IX mimic
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2020-04-14
Authors: Kugler, M., Brynda, J., Pospisilova, K., Rezacova, P.
PDB entry 6yo8: Binary complex of 14-3-3 zeta with Glucocorticoid Receptor (GR) pT524 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2020-04-14
Authors: Munier, C.C., Edman, K., Perry, M.W.D., Ottmann, C.
PDB entry 6yo9: Product bound structure of the Ectoine utilization protein EutD (DoeA) from Halomonas elongata
Classification: HYDROLASE
Source organism: Halomonas elongata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-04-14
Authors: Mais, C.-N., Altegoer, F., Bange, G.
PDB entry 6yoa: Lig v 1 structure and the inflammatory response to the Ole e 1 protein family
Classification: ALLERGEN
Source organism: Ligustrum vulgare
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2020-04-14
Authors: Robledo-Retana, T., Bradley-Clark, J., Croll, T., Rose, R., Stagg, A., Villalba, M., Pickersgill, R.
PDB entry 6yob: Structure of Lysozyme from COC IMISX setup collected by rotation serial crystallography on crystals prelocated by 2D X-ray phase-contrast imaging
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-04-14
Authors: Huang, C.-Y., Martiel, I., Villanueva-Perez, P., Panepucci, E., Caffrey, M., Wang, M.
PDB entry 6yoc: Structure of Lysozyme from COC IMISX setup collected by still serial crystallography on crystals prelocated by 2D X-ray phase-contrast imaging
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2020-04-14
Authors: Huang, C.-Y., Martiel, I., Villanueva-Perez, P., Panepucci, E., Caffrey, M., Wang, M.
PDB entry 6yod: Structure of Lysozyme from SiN IMISX setup collected by rotation serial crystallography on crystals prelocated by 2D X-ray phase-contrast imaging
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.601 Å
Deposited: 2020-04-14
Authors: Huang, C.-Y., Martiel, I., Villanueva-Perez, P., Panepucci, E., Caffrey, M., Wang, M.
PDB entry 6yoe: Structure of Lysozyme from SiN IMISX setup collected by still serial crystallography on crystals prelocated by 2D X-ray phase-contrast imaging
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-04-14
Authors: Huang, C.-Y., Martiel, I., Villanueva-Perez, P., Panepucci, E., Caffrey, M., Wang, M.
PDB entry 6yof: Structure of PepTSt from COC IMISX setup collected by rotation serial crystallography on crystals prelocated by 2D X-ray phase-contrast imaging
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2020-04-14
Authors: Huang, C.-Y., Martiel, I., Villanueva-Perez, P., Panepucci, E., Caffrey, M., Wang, M.
PDB entry 6yog: Structure of PepTSt from COC IMISX setup collected by still serial crystallography on crystals prelocated by 2D X-ray phase-contrast imaging
Classification: TRANSPORT PROTEIN
Source organism: Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-04-14
Authors: Huang, C.-Y., Martiel, I., Villanueva-Perez, P., Panepucci, E., Caffrey, M., Wang, M.
PDB entry 6yoh: LecA from Pseudomonas aeruginosa in complex with a catechol CAS no. 61445-50-9
Classification: SUGAR BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-04-14
Authors: Kuhaudomlarp, S., Imberty, A., Titz, A., Varrot, A.
PDB entry 6yoi: Meta-Carborane di-propyl-sulfonamide in complex with CA IX mimic
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-04-14
Authors: Kugler, M., Brynda, J., Pospisilova, K., Rezacova, P.
PDB entry 6yoj: FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH 6-[4-(3-Methanesulfonyl-benzylamino)-5-trifluoromethyl-pyrimidin-2-ylamino]-3,4-dihydro-1H-quinolin-2-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.361 Å
Deposited: 2020-04-14
Authors: Musil, D., Heinrich, T.
PDB entry 6yok: Para-Carborane di-propyl-sulfonamide in complex with CA IX mimic
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-04-14
Authors: Kugler, M., Brynda, J., Pospisilova, K., Rezacova, P.
PDB entry 6yol: Meta-Nidocarborane propyl-sulfonamide in complex with CA IX mimic
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2020-04-14
Authors: Kugler, M., Brynda, J., Pospisilova, K., Rezacova, P.
PDB entry 6yom: Crystal structure of tetrameric human D137N-SAMHD1 (residues 109-626) with XTP, dATP, dCMPNPP, Mn and Mg
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2020-04-14
Authors: Morris, E.R., Kunzelmann, S., Caswell, S.J., Arnold, L.H., Purkiss, A.G., Kelly, G., Taylor, I.A.
PDB entry 6yon: Crystal structure of Endoglucanase S127C/A165C from Penicillium verruculosum
Classification: HYDROLASE
Source organism: Talaromyces verruculosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-04-14
Authors: Nemashkalov, V., Kravchenko, O., Gabdulkhakov, A., Tischenko, S., Rozhkova, A., Sinitsyn, A.
PDB entry 6yoo: Structure of SAMM50 LIR bound to GABARAPL1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2020-04-14
Authors: Mouilleron, S., Wenxin, Z., Johansen, T., Tooze, S., Abudu, Y.P., Lamark, T.
PDB entry 6yop: Structure of SAMM50 LIR bound to GABARAP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2020-04-14
Authors: Mouilleron, S., Wenxin, Z., Johansen, T., Tooze, S., Abudu, Y.P., Lamark, T.
PDB entry 6yoq: Crystal structure of YTHDC1 with compound VVR_DC1_002
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-04-14
Authors: von Roten, V., Bedi, R.K., Caflisch, A.
PDB entry 6yor: Structure of the SARS-CoV-2 spike S1 protein in complex with CR3022 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-04-15
Authors: Huo, J., Zhao, Y., Ren, J., Zhou, D., Duyvesteyn, H.M.E., Carrique, L., Malinauskas, T., Ruza, R.R., Shah, P.N.M., Fry, E.E., Owens, R., Stuart, D.I.