LiteFold/PDB huggingface dataset:
PDB entry 8f8p: Cryo-EM structure of F-actin in the ADP state
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.26 Å
Deposited: 2022-11-22
Authors: Carman, P.J., Barrie, K.R., Dominguez, R.
PDB entry 8f8q: Cryo-EM structure of the CapZ-capped barbed end of F-actin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2022-11-22
Authors: Carman, P.J., Barrie, K.R., Dominguez, R.
PDB entry 8f8r: Cryo-EM structure of the free barbed end of F-actin
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-11-22
Authors: Carman, P.J., Barrie, K.R., Dominguez, R.
PDB entry 8f8s: Cryo-EM structure of the free pointed end of F-actin
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2022-11-22
Authors: Carman, P.J., Barrie, K.R., Dominguez, R.
PDB entry 8f8t: Cryo-EM structure of the Tropomodulin-capped pointed end of F-actin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2022-11-22
Authors: Carman, P.J., Barrie, K.R., Dominguez, R.
PDB entry 8f8u: Bifunctional ligase/repressor BirA from Klebsiella pneumoniae (Domain Swapped Dimer)
Classification: TRANSCRIPTION
Source organism: Klebsiella pneumoniae subsp. pneumoniae 1158
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-11-22
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8f8v: Crystal structure of Nb.X0
Classification: IMMUNE SYSTEM
Source organism: Camelidae mixed library
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2022-11-22
Authors: Goldgur, Y., Ravetch, J., Gupta, A., Kao, K., Andi, B.
PDB entry 8f8w: Crystal structure of Nb.X0 bound to the afucosylated human IgG1 fragment crystal form I
Classification: IMMUNE SYSTEM
Source organism: Camelidae mixed library; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2022-11-22
Authors: Goldgur, Y., Ravetch, J., Gupta, A., Kao, K., Oren, D.
PDB entry 8f8x: Crystal structure of Nb.X0 bound to the afucosylated human IgG1 fragment crystal form II
Classification: IMMUNE SYSTEM
Source organism: Camelidae mixed library; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-11-22
Authors: Goldgur, Y., Ravetch, J., Gupta, A., Kao, K., Oren, D.
PDB entry 8f8y: PHF2 (PHD+JMJ) in Complex with VRK1 N-Terminal Peptide
Classification: OXIDOREDUCTASE/TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2022-11-22
Authors: Horton, J.R., Cheng, X.
PDB entry 8f8z: PHF2 (PHD+JMJ) in Complex with H3 Histone N-Terminal Peptide
Classification: OXIDOREDUCTASE/TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2022-11-22
Authors: Horton, J.R., Cheng, X.
PDB entry 8f90: Intramolecular ester bond-containing repeat domain 2 from Suipraoptans intestinalis adhesin
Classification: CELL ADHESION
Source organism: Suipraeoptans intestinalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-11-22
Authors: Jin, S., Young, P.G., Squire, C.J.
PDB entry 8f91: OxyB, a cytochrome P450 involved in keratinimicin biosynthesis
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis keratiniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-11-22
Authors: Ireland, K.A., Davis, K.M.
PDB entry 8f92: HIV Env BG505_MD39_B11 SOSIP boosting trimer in complex with B11_d77.7 mouse Fab and RM20A3 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus; Macaca mulatta; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2022-11-23
Authors: Torres, J.L., Ozorowski, G., Ward, A.B.
PDB entry 8f93: WDR5 covalently modified at Y228 by (R)-2-SF
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-11-23
Authors: Taunton, J., Craven, G.B., Chen, Y.
PDB entry 8f94: Structure of an alternating AT 16-mer: 5'-GCTGGATATATCCAGC-3
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2022-11-23
Authors: Terrell, J.R., Ogbonna, E.N., Wilson, W.D.
PDB entry 8f95: Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein DND peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-11-23
Authors: Thai, E., Julien, J.P.
PDB entry 8f96: Compound 3 bound to procaspase-6
Classification: APOPTOSIS,HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2022-11-23
Authors: Fan, P., Zhao, Y., Renslo, A.R., Arkin, M.R.
PDB entry 8f97: Compound 5 bound to procaspase-6
Classification: APOPTOSIS,HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-11-23
Authors: Fan, P., Zhao, Y., Renslo, A.R., Arkin, M.R.
PDB entry 8f98: Compound 8 bound to procaspase-6
Classification: APOPTOSIS,HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-11-23
Authors: Fan, P., Zhao, Y., Renslo, A.R., Arkin, M.R.
PDB entry 8f99: Compound 10 bound to procaspase-6
Classification: APOPTOSIS,HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2022-11-23
Authors: Fan, P., Zhao, Y., Renslo, A.R., Arkin, M.R.
PDB entry 8f9a: Compound 11 bound to procaspase-6
Classification: APOPTOSIS,HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-11-23
Authors: Fan, P., Zhao, Y., Renslo, A.R., Arkin, M.R.
PDB entry 8f9b: Compound 19 bound to procaspase-6
Classification: APOPTOSIS,HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-11-23
Authors: Fan, P., Zhao, Y., Renslo, A.R., Arkin, M.R.
PDB entry 8f9c: Compound 20 bound to procaspase-6
Classification: APOPTOSIS,HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-11-23
Authors: Fan, P., Zhao, Y., Renslo, A.R., Arkin, M.R.
PDB entry 8f9d: Compound 21 bound to procaspase-6
Classification: APOPTOSIS,HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-11-23
Authors: Fan, P., Zhao, Y., Renslo, A.R., Arkin, M.R.
PDB entry 8f9e: Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein KQPA peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2022-11-23
Authors: Thai, E., Julien, J.P.
PDB entry 8f9f: Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein NANP3 peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-11-23
Authors: Thai, E., Julien, J.P.
PDB entry 8f9g: HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized BG18HCgl knock-in mice
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-11-23
Authors: Ozorowski, G., Torres, J.L., Ward, A.B.
PDB entry 8f9h: H64A swMb-MeNO adduct
Classification: TRANSPORT PROTEIN
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-11-23
Authors: Herrera, V.E., Thomas, L.M.
PDB entry 8f9i: H64A swMb-EtNO adduct
Classification: TRANSPORT PROTEIN
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-11-23
Authors: Herrera, V.E., Thomas, L.N.
PDB entry 8f9j: H64A swMb-PrNO adduct
Classification: TRANSPORT PROTEIN
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-11-23
Authors: Herrera, V.E., Thomas, L.M.
PDB entry 8f9k: TMEM106B doublet filaments extracted from MSTD neurodegenerative human brain
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-11-23
Authors: Hoq, M.R., Bharath, S.R., Jiang, W.
PDB entry 8f9l: Intramolecular ester bond-containing repeat domain from Gemella massiliensis adhesin
Classification: CELL ADHESION
Source organism: Gemella massiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.788 Å
Deposited: 2022-11-23
Authors: Jin, S., Young, P.G., Squire, C.J.
PDB entry 8f9m: HIV Env germline targeting BG505_MD64_N332-GT5 SOSIP in complex with V3-glycan polyclonal Fab isolated from immunized wild type mice, and NHP monoclonal Fab RM20A3
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macaca mulatta; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-11-23
Authors: Ozorowski, G., Ward, A.B.
PDB entry 8f9n: H64A swMb-iPrNO adduct
Classification: TRANSPORT PROTEIN
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-11-24
Authors: Herrera, V.E., Thomas, L.M.
PDB entry 8f9o: Dog sialic acid esterase (SIAE)
Classification: HYDROLASE
Source organism: Canis lupus familiaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-11-24
Authors: Ide, D., Gorelik, A., Illes, K., Nagar, B.
PDB entry 8f9p: Dog sialic acid esterase (SIAE) inactive mutant S128A
Classification: HYDROLASE
Source organism: Canis lupus familiaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-11-24
Authors: Ide, D., Gorelik, A., Illes, K., Nagar, B.
PDB entry 8f9q: Guinea pig sialic acid esterase (SIAE)
Classification: HYDROLASE
Source organism: Cavia porcellus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2022-11-24
Authors: Ide, D., Gorelik, A., Illes, K., Nagar, B.
PDB entry 8f9r: Rabbit sialic acid esterase (SIAE)
Classification: HYDROLASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2022-11-24
Authors: Ide, D., Gorelik, A., Illes, K., Nagar, B.
PDB entry 8f9s: Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein NDN peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-24
Authors: Thai, E., Julien, J.P.
PDB entry 8f9t: Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein NPDP peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-11-24
Authors: Thai, E., Julien, J.P.
PDB entry 8f9u: Crystal structure of Ky15.7 Fab in complex with circumsporozoite protein NPDP peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-24
Authors: Thai, E., Julien, J.P.
PDB entry 8f9v: Crystal structure of Ky15.8 Fab in complex with circumsporozoite protein KQPA peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-11-24
Authors: Thai, E., Prieto, K., Julien, J.P.
PDB entry 8f9w: Crystal structure of Ky15.8 Fab in complex with circumsporozoite protein NPDP peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-24
Authors: Thai, E., Prieto, K., Julien, J.P.
PDB entry 8f9x: Cyclase-Phosphotriesterase from Ruegeria pomeroyi DSS-3
Classification: HYDROLASE
Source organism: Ruegeria pomeroyi DSS-3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-11-24
Authors: Frkic, R.L., Ji, D., Jackson, C.J.
PDB entry 8f9y: SAL1 from Arabidopsis thaliana
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-11-24
Authors: Frkic, R.L., Kaczmarski, J.A., Tan, L., Jackson, C.J.
PDB entry 8f9z: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-14204, an HIV-1 gp120 antagonist
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-11-25
Authors: Kwon, Y.D., Kwong, P.D.
PDB entry 8fa0: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-14208, an HIV-1 gp120 antagonist
Classification: VIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-11-25
Authors: Kwon, Y.D., Kwong, P.D.
PDB entry 8fa1: Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with N969K mutation
Classification: VIRAL PROTEIN
Source organism: Nostoc punctiforme PCC 73102; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2022-11-25
Authors: Yang, K., Brunger, A.T.
PDB entry 8fa2: Cryo-EM structure of the SARS-CoV-2 Omicron HR1-42G complex
Classification: VIRAL PROTEIN
Source organism: Nostoc punctiforme PCC 73102; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2022-11-25
Authors: Yang, K., Brunger, A.T.
PDB entry 8fa3: Structure of N-terminal of Schistosoma japonicum asparaginyl-tRNA synthetase
Classification: LIGASE
Source organism: Schistosoma japonicum
Experimental method: SOLUTION NMR
Deposited: 2022-11-25
Authors: Peck, Y., Daly, N.L., Mobli, M.
PDB entry 8fa4: Crystal structure of Xanthomonas campestris GanA beta-galactosidase
Classification: HYDROLASE
Source organism: Xanthomonas campestris pv. campestris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.699 Å
Deposited: 2022-11-25
Authors: Godoy, A.S., Polikarpov, I.
PDB entry 8fa5: Crystal structure of Xanthomonas campestris GH35 beta-galactosidase
Classification: HYDROLASE
Source organism: Xanthomonas campestris pv. campestris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-11-25
Authors: Godoy, A.S., Polikarpov, I.
PDB entry 8fa6: Crystal structure of Ky15.10 Fab in complex with circumsporozoite protein DND peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-11-25
Authors: Thai, E., Prieto, K., Julien, J.P.
PDB entry 8fa7: Crystal structure of Ky15.11 Fab in complex with circumsporozoite protein KQPA peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-11-25
Authors: Thai, E., Julien, J.P.
PDB entry 8fa8: Crystal structure of Ky15.11 Fab in complex with circumsporozoite protein NDN peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-11-25
Authors: Thai, E., Julien, J.P.
PDB entry 8fa9: Crystal structure of Ky15.5 Fab in complex with circumsporozoite protein NPDP peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-11-25
Authors: Thai, E., Prieto, K., Julien, J.P.
PDB entry 8faa: Crystal structure of Xanthomonas campestris GH35 beta-galactosidase
Classification: HYDROLASE
Source organism: Xanthomonas campestris pv. campestris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-11-25
Authors: Godoy, A.S., Polikarpov, I.
PDB entry 8fab: CRYSTAL STRUCTURE OF THE FAB FRAGMENT FROM THE HUMAN MYELOMA IMMUNOGLOBULIN IGG HIL AT 1.8 ANGSTROMS RESOLUTION
Classification: IMMUNOGLOBULIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1992-03-23
Authors: Saul, F.A., Poljak, R.J.
PDB entry 8fac: Structure of the leucine-rich repeat kinase 1 monomer
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2022-11-25
Authors: Metcalfe, R.D., Martinez Fiesco, J.A., Zhang, P.
PDB entry 8fad: Asymmetric structure of cleaved HIV-1 AD8 envelope glycoprotein trimer in styrene-maleic acid lipid nanoparticles
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-11-26
Authors: Wang, K., Zhang, S., Sodroski, J., Mao, Y.
PDB entry 8fae: Asymmetric structure of cleaved HIV-1 AE2 envelope glycoprotein trimer in styrene-maleic acid lipid nanoparticles (AE2.1)
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-11-26
Authors: Wang, K., Zhang, S., Sodroski, J., Mao, Y.
PDB entry 8faf: Unedited Octopus bimaculoides Synaptotagmin 1 C2A at room temperature
Classification: EXOCYTOSIS
Source organism: Octopus bimaculoides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-11-26
Authors: McNeme, S., Dominguez, M.J., Birk, M.A., Rosenthal, J.C., Sutton, R.B.
PDB entry 8fah: Crystal structure of SARS-CoV-2 receptor binding domain in complex with SARS-CoV-2 reactive human antibody CR3022
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 4.22 Å
Deposited: 2022-11-26
Authors: Sankhala, R.S., Jensen, J.L., Joyce, M.G.
PDB entry 8fai: Cryo-EM structure of the Agrobacterium T-pilus
Classification: PROTEIN FIBRIL
Source organism: Agrobacterium tumefaciens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-11-27
Authors: Kreida, S., Narita, A., Johnson, M.D., Tocheva, E.I., Das, A., Jensen, G.J., Ghosal, D.
PDB entry 8faj: OXA-48-NA-1-157 inhibitor complex
Classification: HYDROLASE/INHIBITOR
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-11-28
Authors: Smith, C.A., Stewart, N.K., Toth, M., Vakulenko, S.B.
PDB entry 8fak: DNA replication fork binding triggers structural changes in the PriA DNA helicase that regulate the PriA-PriB replication restart pathway in E. coli
Classification: HELICASE/DNA
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2022-11-28
Authors: Duckworth, A.T., Ducos, P.L., McMillan, S.D., Satyshur, K.A., Blumenthal, K.H., Deorio, H.R., Larson, J.A., Sandler, S.J., Grant, T., Keck, J.L.
PDB entry 8fal: Masking thiol reactivity with thioamide-based MBPs- carbonic anhydrase II complexed with benzo[d]thiazole-2(3H)-thione
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2022-11-28
Authors: Kohlbrand, A.J., Seo, H.
PDB entry 8fam: Edited Octopus bimaculoides Synaptotagmin 1 C2A (I248V) at room temperature
Classification: EXOCYTOSIS
Source organism: Octopus bimaculoides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-11-28
Authors: McNeme, S., Dominguez, M.J., Birk, M.A., Rosenthal, J.J., Sutton, R.B.
PDB entry 8fan: Crystal structure of Ky15.1 Fab in complex with circumsporozoite protein KQPA peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-11-28
Authors: Burn Aschner, C., Thai, E., Julien, J.P.
PDB entry 8fao: Bile Salt Hydrolase B from Lactobacillus gasseri with covalent inhibitor bound
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Lactobacillus gasseri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-11-28
Authors: Grundy, M.K., Walker, M.E., Redinbo, M.R.
PDB entry 8faq: Structure of Hemagglutinin from Influenza A/Victoria/22/2020
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.035 Å
Deposited: 2022-11-28
Authors: Hernandez Garcia, A., Lei, R.
PDB entry 8far: Accurate computational design of genetically encoded 3D protein crystals
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.66 Å
Deposited: 2022-11-28
Authors: Bera, A.K., Li, Z., Baker, D.
PDB entry 8fas: Crystal structure of Ky230 Fab in complex with circumsporozoite protein NANP5 peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-11-28
Authors: Kassardjian, A., Thai, E., Julien, J.P.
PDB entry 8fat: Crystal structure of Ky224 Fab in complex with circumsporozoite protein NPDP peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2022-11-28
Authors: Kassardjian, A., Thai, E., Julien, J.P.
PDB entry 8fau: Masking thiol reactivity with thioamide-based MBPs- carbonic anhydrase II complexed with 4-phenylthiazole-2(3H)-thione
Classification: LYASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2022-11-28
Authors: Kohlbrand, A.J., Seo, H.
PDB entry 8fav: HUMAN RETENOID-RELATED ORPHAN RECEPTOR-GAMMA (RORC2) LIGAND-BINDING DOMAIN IN COMPLEX WITH COMPOUND 5 ANDINDAZOLE ACID BOUND IN H12-POCKET
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-11-28
Authors: Vajdos, F.F.
PDB entry 8faw: Structure of Hemagglutinin from Influenza A/Victoria/22/2020 in complex with LSTC
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2022-11-28
Authors: Hernandez Garcia, A., Lei, R.
PDB entry 8fax: Fab 1249A8-MERS Stem Helix Complex
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-11-28
Authors: Deshpande, A., Schormann, N., Piepenbrink, M.S., Martinez-Sobrido, L., Kobie, J.J., Walter, M.R.
PDB entry 8fay: Human MUTYH adenine glycosylase bound to DNA containing a transition state analog (1N) paired with d(8-oxo-G)
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2022-11-29
Authors: Trasvina-Arenas, C.H., Lin, W.J., Demir, M., Fisher, A.J., David, S.S., Horvath, M.P.
PDB entry 8faz: Cryo-EM structure of the human BCDX2 complex
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-11-29
Authors: Jia, L., Wasmuth, E.V., Ruben, E.A., Sung, P., Rawal, Y., Greene, E.C., Meir, A., Olsen, S.K.
PDB entry 8fb0: H64Q Myoglobin in complex with acetamide
Classification: OXYGEN STORAGE
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2022-11-29
Authors: Powell, S.M., Thomas, L.M., Richter-Addo, G.B.
PDB entry 8fb1: HUMAN RETENOID-RELATED ORPHAN RECEPTOR-GAMMA (RORC2) LIGAND-BINDING DOMAIN IN COMPLEX WITH COMPOUND 6a ANDINDAZOLE ACID BOUND IN H12-POCKET
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-11-29
Authors: Vajdos, F.F.
PDB entry 8fb2: HUMAN RETENOID-RELATED ORPHAN RECEPTOR-GAMMA (RORC2) LIGAND-BINDING DOMAIN IN COMPLEX WITH COMPOUND 8 ANDINDAZOLE ACID BOUND IN H12-POCKET
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-11-29
Authors: Vajdos, F.F.
PDB entry 8fb3: PreQ1-1 (type-1) riboswitch with stacked metabolites and a C10-G34 base pair in the expression platform
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-11-29
Authors: Wedekind, J.E., Schroeder, G.M., Jenkins, J.L.
PDB entry 8fb4: Structure of an alternating AT 16-mer bound by diamidine DB1476: 5'-GCTGGATATATCCAGC-3
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-11-29
Authors: Terrell, J.R., Ogbonna, E.N., Wilson, W.D.
PDB entry 8fb5: Crystal structure of Ky15.11-S100IK Fab in complex with circumsporozoite protein KQPA peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-11-29
Authors: Kang, R.W., Thai, E., Julien, J.P.
PDB entry 8fb6: Crystal structure of Ky15.10 Fab in complex with circumsporozoite protein KQPA peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-11-29
Authors: Prieto, K., Thai, E., Julien, J.P.
PDB entry 8fb7: Crystal structure of Ky15.10 Fab in complex with circumsporozoite protein NPDP peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-11-29
Authors: Prieto, K., Thai, E., Julien, J.P.
PDB entry 8fb8: Crystal structure of Ky15.10-Y100EK Fab in complex with circumsporozoite protein KQPA peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-11-29
Authors: Kang, R.W., Thai, E., Julien, J.P.
PDB entry 8fb9: LH2-LH3 antenna in anti parallel configuration embedded in a nanodisc
Classification: PHOTOSYNTHESIS
Source organism: Magnetospirillum molischianum
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.4 Å
Deposited: 2022-11-29
Authors: Toporik, H., Harris, D., Schlau-Cohen, G.S., Mazor, Y.
PDB entry 8fba: Crystal structure of Ky315 Fab in complex with circumsporozoite protein DND peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-11-29
Authors: Burn Aschner, C., Julien, J.P.
PDB entry 8fbb: LH2-LH3 antenna in parallel configuration embedded in a nanodisc
Classification: PHOTOSYNTHESIS
Source organism: Magnetospirillum molischianum
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.3 Å
Deposited: 2022-11-29
Authors: Toporik, H., Harris, D., Schlau-Cohen, G.S., Mazor, Y.
PDB entry 8fbc: Crystal structure of P450T2
Classification: BIOSYNTHETIC PROTEIN
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2022-11-29
Authors: Pereira, J.H., Huang, J., Keasling, J., Adams, P.D.
PDB entry 8fbd: Crystal structure of OrfX1-OrfX3 complex from Clostridium botulinum E1
Classification: UNKNOWN FUNCTION
Source organism: Clostridium botulinum E1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-11-29
Authors: Liu, S., Gao, L.
PDB entry 8fbe: Crystal structure of OrfX1 from Clostridium botulinum E1
Classification: UNKNOWN FUNCTION
Source organism: Clostridium botulinum E1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-11-29
Authors: Liu, S., Gao, L.
PDB entry 8fbf: Crystal structure of OrfX2 from Clostridium botulinum E1
Classification: UNKNOWN FUNCTION
Source organism: Clostridium botulinum E1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-11-29
Authors: Lam, K.H., Gao, L.
PDB entry 8fbg: Crystal structure of NSD1 Mutant-Y1869C
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-11-29
Authors: Providokhina, K., Dong, A., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 8fbh: Crystal structure of NSD1 Mutant-T1927A
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-11-29
Authors: Providokhina, K., Dong, A., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 8fbi: Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.61 Å
Deposited: 2022-11-29
Authors: Wang, J.Y., Khmelinskaia, A., Bera, A.K., King, N.P.
PDB entry 8fbj: Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2022-11-29
Authors: Wang, J.Y., Khmelinskaia, A., Bera, A.K., King, N.P.
PDB entry 8fbk: Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2022-11-29
Authors: Wang, J.Y., Khmelinskaia, A., Bera, A.K., King, N.P.
PDB entry 8fbl: Human PAC in nanodisc at pH 4.0 with PI(4,5)P2 diC8
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-11-29
Authors: Ruan, Z., Lu, W.
PDB entry 8fbm: Crystal structure of Cryptosporidium parvum N-myristoyltransferase with bound myristoyl-CoA and inhibitor 1
Classification: TRANSFERASE/INHIBITOR
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-11-29
Authors: Staker, B.L., Fenwick, M.K., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8fbn: Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2022-11-29
Authors: Wang, J.Y., Khmelinskaia, A., Bera, A.K., King, N.P.
PDB entry 8fbo: Improving the secretion of designed protein assemblies through negative design of cryptic transmembrane domains
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2022-11-29
Authors: Wang, J.Y., Khmelinskaia, A., Bera, A.K., King, N.P.
PDB entry 8fbp: Glutamine synthetase from Pseudomonas aeruginosa, filament double-unit in compressed conformation
Classification: LIGASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-11-29
Authors: Phan, I.Q., Staker, B., Shek, R., Moser, T.H., Evans, J.E., van Voorhis, W.C., Myler, P.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8fbq: Crystal structure of Plasmodium vivax glycylpeptide N-tetradecanoyltransferase (N-myristoyltransferase, NMT) bound to myristoyl-CoA and inhibitor 12b
Classification: TRANSFERASE/INHIBITOR
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-11-29
Authors: Fenwick, M.K., Staker, B.L., Lovell, S.W., Phan, I.Q., Early, J., Myler, P.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8fbt: Crystal structure of Cryptosporidium parvum N-myristoyltransferase with bound myristoyl-CoA
Classification: TRANSFERASE
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-11-30
Authors: Staker, B.L., Fenwick, M.K., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8fbu: Crystal structure of Cryptosporidium parvum N-myristoyltransferase with bound myristoyl-CoA and Compound-2
Classification: TRANSFERASE/INHIBITOR
Source organism: Cryptosporidium parvum Iowa II
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-11-30
Authors: Staker, B.L., Fenwick, M.K., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8fbv: Compound 7 bound to procaspase-6
Classification: APOPTOSIS,HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2022-11-30
Authors: Fan, P., Zhao, Y., Renslo, A.R., Arkin, M.R.
PDB entry 8fbw: Crystal structure of SIV-1 V2 antibody NCI05 in complex with a V2 peptide
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Macaca mulatta; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-11-30
Authors: Zhou, T., Kwong, P.D., Van Wazer, D.J.
PDB entry 8fbx: Selenosugar synthase SenB from Variovorax paradoxus
Classification: TRANSFERASE
Source organism: Variovorax paradoxus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-11-30
Authors: Ireland, K.A., Davis, K.M.
PDB entry 8fby: Crystal structure of PLVAP CC1 determined by sulfur SAD
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-11-30
Authors: Chang, T.H., Hsieh, F.L., Gabelli, S.B., Nathans, J.
PDB entry 8fbz: Crystal Structure of apo human Glutathione Synthetase Y270E
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2022-11-30
Authors: Stanford, S.M., Santelli, E., Sankaran, B., Murali, R., Bottini, N.
PDB entry 8fc0: Crystal structure of a metagenome-derived GH5 endo-beta-1,4-glucanase
Classification: HYDROLASE
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-01
Authors: Liberato, M.V., Squina, F.
PDB entry 8fc1: Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.50A resolution
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-12-01
Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S.
PDB entry 8fc2: Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-12-01
Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S.
PDB entry 8fc3: Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.60A resolution
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-12-01
Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S.
PDB entry 8fc4: Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-12-01
Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S.
PDB entry 8fc5: Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.65A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-12-01
Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S.
PDB entry 8fc6: Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.35A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-12-01
Authors: Chen, C.-W., Syroegin, E.A., Svetlov, M.S., Polikanov, Y.S.
PDB entry 8fc7: Cryo-EM structure of the human TRPV4 - RhoA in complex with GSK2798745
Classification: MEMBRANE PROTEIN/Hydrolase
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-12-01
Authors: Kwon, D.H., Lee, S.-Y., Zhang, F.
PDB entry 8fc8: Cryo-EM structure of the human TRPV4 in complex with GSK1016790A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2022-12-01
Authors: Kwon, D.H., Lee, S.-Y., Zhang, F.
PDB entry 8fc9: Cryo-EM structure of the human TRPV4 - RhoA, apo condition
Classification: MEMBRANE PROTEIN/Hydrolase
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2022-12-01
Authors: Kwon, D.H., Lee, S.-Y., Zhang, F.
PDB entry 8fca: Cryo-EM structure of the human TRPV4 - RhoA in complex with 4alpha-Phorbol 12,13-didecanoate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2022-12-01
Authors: Kwon, D.H., Lee, S.-Y., Zhang, F.
PDB entry 8fcb: Cryo-EM structure of the human TRPV4 - RhoA in complex with GSK1016790A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2022-12-01
Authors: Kwon, D.H., Lee, S.-Y., Zhang, F.
PDB entry 8fcc: HIV-1 Reverse Transcriptase in complex with 5-membered bicyclic core NNRTI
Classification: VIRAL PROTEIN
Source organism: HIV whole-genome vector AA1305#18
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2022-12-01
Authors: Lansdon, E.B.
PDB entry 8fcd: HIV-1 Reverse Transcriptase in complex with 6-membered bicyclic core NNRTI
Classification: VIRAL PROTEIN
Source organism: HIV whole-genome vector AA1305#18
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2022-12-01
Authors: Lansdon, E.B.
PDB entry 8fce: HIV-1 Reverse Transcriptase in complex with 7-membered bicyclic core NNRTI
Classification: VIRAL PROTEIN
Source organism: HIV whole-genome vector AA1305#18
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2022-12-01
Authors: Lansdon, E.B.
PDB entry 8fcf: Crystal structure of PLVAP CC1 in I212121 space group
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-12-01
Authors: Chang, T.H., Hsieh, F.L., Gu, X., Kavran, J., Gabelli, S.B., Nathans, J.
PDB entry 8fcg: Cryo-EM structure of Chikungunya virus asymmetric unit
Classification: VIRUS
Source organism: Chikungunya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2022-12-01
Authors: Su, G.C., Chmielewsk, D., Kaelber, J., Pintilie, G., Chen, M., Jin, J., Auguste, A., Chiu, W.
PDB entry 8fch: Apo Structure of (N1G37) Methyltransferase from Mycobacterium avium
Classification: TRANSFERASE
Source organism: Mycobacterium avium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.956 Å
Deposited: 2022-12-01
Authors: Isaacson, B., Brylewski, J., Schlegel, F., Cortes, J., Lavallee, T., Mehta, K., Young, A., Doti, L., Battaile, K.P., Stojanoff, V., Perez, A., Bolen, R.
PDB entry 8fci: tRNA (N1G37) Methyltransferase (TrmD) of Mycobacterium avium complexed with S-Adenosyl homocysteine
Classification: TRANSFERASE
Source organism: Mycobacterium avium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.752 Å
Deposited: 2022-12-01
Authors: Lavallee, T., Mehta, K., Young, A., Cortes, J., Isaacson, B., Brylewski, J., Schlegel, F., Doti, L., Battaile, K., Stojanoff, V., Perez, A., Bolen, R.
PDB entry 8fcj: Cryo-EM structure of Cascade-DNA (P23) complex in type I-B CAST system
Classification: DNA BINDING PROTEIN
Source organism: Nostoc sp. 'Peltigera membranacea cyanobiont' 210A; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2022-12-01
Authors: Chang, L., Wang, S.
PDB entry 8fck: Structure of the vertebrate augmin complex
Classification: CELL CYCLE
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.88 Å
Deposited: 2022-12-01
Authors: Travis, S.M., Huang, W., Zhang, R., Petry, S.
PDB entry 8fcl: Cryo-EM structure of p97:UBXD1 closed state
Classification: CHAPERONE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2022-12-01
Authors: Braxton, J.R., Tucker, M.R., Tse, E., Southworth, D.R.
PDB entry 8fcm: Cryo-EM structure of p97:UBXD1 open state
Classification: CHAPERONE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2022-12-01
Authors: Braxton, J.R., Tucker, M.R., Tse, E., Southworth, D.R.
PDB entry 8fcn: Cryo-EM structure of p97:UBXD1 VIM-only state
Classification: CHAPERONE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2022-12-01
Authors: Braxton, J.R., Tucker, M.R., Tse, E., Southworth, D.R.
PDB entry 8fco: Cryo-EM structure of p97:UBXD1 meta state
Classification: CHAPERONE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2022-12-01
Authors: Braxton, J.R., Tucker, M.R., Tse, E., Southworth, D.R.
PDB entry 8fcp: Cryo-EM structure of p97:UBXD1 para state
Classification: CHAPERONE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2022-12-01
Authors: Braxton, J.R., Tucker, M.R., Tse, E., Southworth, D.R.
PDB entry 8fcq: Cryo-EM structure of p97:UBXD1 PUB-in state
Classification: CHAPERONE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2022-12-01
Authors: Braxton, J.R., Tucker, M.R., Tse, E., Southworth, D.R.
PDB entry 8fcr: Cryo-EM structure of p97:UBXD1 H4-bound state
Classification: CHAPERONE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.12 Å
Deposited: 2022-12-01
Authors: Braxton, J.R., Tucker, M.R., Tse, E., Southworth, D.R.
PDB entry 8fcs: Structure of pre-miR-31 reveals an active role in Dicer processing
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2022-12-01
Authors: Kotar, A., Ma, S., Keane, S.
PDB entry 8fct: Cryo-EM structure of p97:UBXD1 lariat mutant
Classification: CHAPERONE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2022-12-01
Authors: Braxton, J.R., Tucker, M.R., Tse, E., Southworth, D.R.
PDB entry 8fcu: Cryo-EM structure of Cascade-DNA-TniQ-TnsC complex in type I-B CAST system
Classification: DNA BINDING PROTEIN
Source organism: Nostoc sp. 'Peltigera membranacea cyanobiont' 210A; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2022-12-01
Authors: Chang, L., Wang, S.
PDB entry 8fcv: Cryo-EM structure of TnsC-TniQ-DNA complex in type I-B CAST system
Classification: DNA BINDING PROTEIN
Source organism: Nostoc sp. 'Peltigera membranacea cyanobiont' 210A; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2022-12-01
Authors: Chang, L., Wang, S.
PDB entry 8fcw: Cryo-EM structure of TnsC-DNA complex in type I-B CAST system
Classification: DNA BINDING PROTEIN
Source organism: Nostoc sp. 'Peltigera membranacea cyanobiont' 210A; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2022-12-01
Authors: Chang, L., Wang, S.
PDB entry 8fcx: Cryo-EM structure of TnsC oligomer in type I-B CAST system
Classification: DNA BINDING PROTEIN
Source organism: Nostoc sp. 'Peltigera membranacea cyanobiont' 210A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2022-12-01
Authors: Chang, L., Wang, S.
PDB entry 8fcy: Engineered human dynein motor domain in microtubule-bound state
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Thermus thermophilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-12-01
Authors: Ton, W., Wang, Y., Chai, P.
PDB entry 8fcz: Crystal structure of ground-state rhodopsin in complex with a nanobody
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2022-12-01
Authors: Salom, D., Palczewski, K., Kiser, P.D.
PDB entry 8fd0: Crystal structure of bovine rod opsin in complex with a nanobody
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.71 Å
Deposited: 2022-12-01
Authors: Salom, D., Palczewski, K., Kiser, P.D.
PDB entry 8fd1: Crystal structure of photoactivated rhodopsin in complex with a nanobody
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 4.25 Å
Deposited: 2022-12-01
Authors: Salom, D., Palczewski, K., Kiser, P.D.
PDB entry 8fd2: Cryo-EM structure of Cascade complex in type I-B CAST system
Classification: DNA BINDING PROTEIN
Source organism: Nostoc sp. 'Peltigera membranacea cyanobiont' 210A; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2022-12-01
Authors: Chang, L., Wang, S.
PDB entry 8fd3: Cryo-EM structure of Cascade-PAM complex in type I-B CAST system
Classification: DNA BINDING PROTEIN
Source organism: Nostoc sp. 'Peltigera membranacea cyanobiont' 210A; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2022-12-01
Authors: Chang, L., Wang, S.
PDB entry 8fd4: Solution structure of mu-theraphotoxin Cg4a from Chinese tarantula Chilobrachys jingzhao
Classification: TOXIN
Source organism: Chilobrachys guangxiensis
Experimental method: SOLUTION NMR
Deposited: 2022-12-01
Authors: Sharma, G., Jia, X., Chin, Y.K.Y., Mobli, M.
PDB entry 8fd6: Engineered human dynein motor domain in the microtubule-unbound state in the buffer containing ATP-Vi
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Thermus thermophilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-12-02
Authors: Ton, W., Wang, Y., Chai, P.
PDB entry 8fd7: Structure of the human L-type voltage-gated calcium channel Cav1.2 complexed with gabapentin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-12-02
Authors: Chen, Z., Mondal, A., Minor, D.L.
PDB entry 8fd8: human 15-PGDH with NADH bound
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-12-02
Authors: Huang, W., Taylor, D.
PDB entry 8fd9: Structure of BTK kinase domain with the second-generation inhibitor acalabrutinib
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-02
Authors: Lin, D.Y., Andreotti, A.H.
PDB entry 8fda: Human Cytochrome P450 17A1 in complex with steroidal isonitrile inhibitor
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-02
Authors: Richard, A.M., Scott, E.E.
PDB entry 8fdb: CRYSTAL STRUCTURE OF NAGB-II PHOSPHOSUGAR ISOMERASE FROM Shewanella denitrificans OS217 IN COMPLEX WITH GLUCITOLAMINE-6-PHOSPHATE AT 3.06 A RESOLUTION.
Classification: ISOMERASE
Source organism: Shewanella denitrificans OS217
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2022-12-02
Authors: Rodriguez-Romero, A., Rodriguez-Hernandez, A., Marcos-Viquez, J., Bustos-Jaimes, I.