LiteFold/PDB huggingface dataset:
PDB entry 3d6l: Crystal structure of Cj0915, a hexameric hotdog fold thioesterase of Campylobacter jejuni
Classification: HYDROLASE
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2008-05-19
Authors: Yokoyama, T., Yeo, H.J.
PDB entry 3d6m: Crystal structure of human caspase-1 with a naturally-occurring Lys319->Arg substitution in complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-propionylamino]-4-oxo-pentanoic acid (z-VAD-FMK)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-19
Authors: Rosen-Wolff, A., Roesler, J., Romanowski, M.J.
PDB entry 3d6n: Crystal Structure of Aquifex Dihydroorotase Activated by Aspartate Transcarbamoylase
Classification: HYDROLASE/TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-20
Authors: Edwards, B.F.P.
PDB entry 3d6o: The RNase A- 5'-Deoxy-5'-N-(ethyl isonipecotatyl)uridine complex
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2008-05-20
Authors: Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G.
PDB entry 3d6p: RNase A- 5'-Deoxy-5'-N-morpholinouridine complex
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-20
Authors: Leonidas, D.D., Zogrpahos, S.E., Oikonomakos, N.G.
PDB entry 3d6q: The RNase A- 5'-Deoxy-5'-N-piperidinouridine complex
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-20
Authors: Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G.
PDB entry 3d6r: Structure of an avian influenza A virus NS1 protein effector domain
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.997 Å
Deposited: 2008-05-20
Authors: Hale, B.G., Barclay, W.S., Randall, R.E., Russell, R.J.
PDB entry 3d6t: Structure of the ROC domain from the Parkinson's disease-associated leucine-rich repeat kinase 2 reveals a dimeric GTPase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2008-05-20
Authors: Deng, J.
PDB entry 3d6u: Crystal structure of 4-(trifluoromethyldiazirinyl)phenylalanyl-tRNA synthetase
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-20
Authors: Liu, W., Tippmann, E., Mack, A.V., Schultz, P.G.
PDB entry 3d6v: Crystal structure of 4-(trifluoromethyldiazirinyl)phenylalanyl-tRNA synthetase
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-20
Authors: Liu, W., Tippmann, E., Mack, A.V., Schultz, P.G.
PDB entry 3d6w: LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.
Classification: DNA BINDING PROTEIN
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-05-20
Authors: Osipiuk, J., Evdokimova, E., Kudritska, M., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d6x: Crystal structure of Campylobacter jejuni FabZ
Classification: LYASE
Source organism: Campylobacter jejuni subsp. jejuni 81-176
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2008-05-20
Authors: Yokoyama, T., Yeo, H.J.
PDB entry 3d6y: Crystal structure of R275E mutant of BMRR bound to DNA and berberine
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Bacillus subtilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-05-20
Authors: Newberry, K.J., Brennan, R.G.
PDB entry 3d6z: Crystal structure of R275E mutant of BMRR bound to DNA and rhodamine
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Bacillus subtilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-05-20
Authors: Newberry, K.J., Brennan, R.G.
PDB entry 3d70: Crystal structure of E253A mutant of BMRR bound to 22-bp oligonucleotide
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Bacillus subtilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-05-20
Authors: Newberry, K.J., Brennan, R.G.
PDB entry 3d71: Crystal structure of E253Q BMRR bound to 22 base pair promoter site
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Bacillus subtilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-05-20
Authors: Newberry, K.J., Huffman, J.L., Brennan, R.G.
PDB entry 3d72: 1.65 Angstrom crystal structure of the Cys71Val variant in the fungal photoreceptor VVD
Classification: SIGNALING PROTEIN
Source organism: Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-05-20
Authors: Zoltowski, B.D., Crane, B.R.
PDB entry 3d73: Crystal structure of a pheromone binding protein mutant D35A, from Apis mellifera, at pH 7.0
Classification: Pheromone Binding Protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2008-05-20
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3d74: Crystal structure of a pheromone binding protein mutant D35A, from Apis mellifera, soaked at pH 5.5
Classification: Pheromone Binding Protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-20
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3d75: Crystal structure of a pheromone binding protein mutant D35N, from Apis mellifera, at pH 5.5
Classification: Pheromone Binding Protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-20
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3d76: Crystal structure of a pheromone binding protein mutant D35N, from Apis mellifera, soaked at pH 7.0
Classification: Pheromone binding protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-20
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3d77: Crystal structure of a pheromone binding protein mutant D35N, from Apis mellifera, soaked at pH 4.0
Classification: Pheromone binding protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-20
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3d78: Dimeric crystal structure of a pheromone binding protein mutant D35N, from apis mellifera, at pH 7.0
Classification: Pheromone binding protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-20
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3d79: Crystal structure of hypothetical protein PH0734.1 from hyperthermophilic archaea Pyrococcus horikoshii OT3
Classification: UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2008-05-20
Authors: Nishimura, Y., Miyazono, K., Sawano, Y., Makino, T., Nagata, K., Tanokura, M.
PDB entry 3d7a: Crystal structure of DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3
Classification: UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-20
Authors: Shirokane, M., Miyazono, K.I., Sawano, Y., Tanokura, M.
PDB entry 3d7b: The Ribonuclease A- 5'-Deoxy-5'-N-pyrrolidinouridine complex
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-21
Authors: Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G.
PDB entry 3d7c: Crystal structure of the bromodomain of human GCN5, the general control of amino-acid synthesis protein 5-like 2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2008-05-21
Authors: Filippakopoulos, P., Eswaran, J., Picaud, S., Fedorov, O., Murray, J., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3d7d: A high resolution crystal structure of human glutamate carboxypeptidase II (GCPII) in a complex with DCFBD, a urea-based inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2008-05-21
Authors: Lubkowski, J., Barinka, C.
PDB entry 3d7e: Enterococcus casseliflavus glycerol kinase mutant HIS232ALA complexed with glycerol
Classification: TRANSFERASE
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2008-05-21
Authors: Yeh, J.I., Vahedi-Faridi, A.
PDB entry 3d7f: A high resolution crystal structure of human glutamate carboxypeptidase II (GCPII) in a complex with DCIT, a urea-based inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2008-05-21
Authors: Lubkowski, J., Barinka, C.
PDB entry 3d7g: A high resolution crystal structure of human glutamate carboxypeptidase II (GCPII) in a complex with DCMC, a urea-based inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-05-21
Authors: Lubkowski, J., Barinka, C.
PDB entry 3d7h: A high resolution crystal structure of human glutamate carboxypeptidase II (GCPII) in a complex with DCIBzL, a urea-based inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-05-21
Authors: Lubkowski, J., Barinka, C.
PDB entry 3d7i: Crystal structure of carboxymuconolactone decarboxylase family protein possibly involved in oxygen detoxification (1591455) from METHANOCOCCUS JANNASCHII at 1.75 A resolution
Classification: LYASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-05-21
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3d7j: SCO6650, a 6-pyruvoyltetrahydropterin synthase homolog from Streptomyces coelicolor
Classification: UNKNOWN FUNCTION
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-05-21
Authors: Spoonamore, J.E., Roberts, S.A., Heroux, A., Bandarian, V.
PDB entry 3d7k: Crystal structure of benzaldehyde lyase in complex with the inhibitor MBP
Classification: LYASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2008-05-21
Authors: Brandt, G.S.
PDB entry 3d7l: The crystal structure of the protein lin1944 from Listeria innocua .
Classification: structural genomics, unknown function
Source organism: Listeria innocua
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2008-05-21
Authors: Tan, K., Bigelow, L., Gu, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d7m: Crystal Structure of the G Protein Fast-Exchange Double Mutant I56C/Q333C
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-05-21
Authors: Funk, M.A., Preininger, A.M., Oldham, W.M., Meier, S.M., Hamm, H.E., Iverson, T.M.
PDB entry 3d7n: The crystal structure of the flavodoxin, WrbA-like protein from Agrobacterium tumefaciens
Classification: ELECTRON TRANSPORT
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-21
Authors: Zhang, R., Xu, X., Gu, J., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d7o: Human hemoglobin, nitrogen dioxide anion modified
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-21
Authors: Yi, J., Safo, M.K., Richter-Addo, G.B.
PDB entry 3d7p: Crystal structure of human Transthyretin (TTR) at pH 4.0
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2008-05-21
Authors: Palaninathan, S.K., Mohamedmohaideen, N.N., Snee, W.C., Kelly, J.W., Sacchettini, J.C.
PDB entry 3d7q: Crystal structure of a xisi-like protein (npun_ar114) from nostoc punctiforme pcc 73102 at 2.30 A resolution
Classification: UNKNOWN FUNCTION
Source organism: Nostoc punctiforme PCC 73102
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-21
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3d7r: Crystal structure of a putative esterase from Staphylococcus aureus
Classification: HYDROLASE
Source organism: Staphylococcus aureus subsp. aureus USA300_TCH1516
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2008-05-21
Authors: Lam, R., Battaile, K.P., Chan, T., Romanov, V., Lam, K., Soloveychik, M., Wu-Brown, J., Pai, E.F., Chirgadze, N.Y.
PDB entry 3d7s: Crystal structure of Wild-Type E. Coli Asparate Transcarbamoylase at pH 8.5 at 2.80 A Resolution
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-05-21
Authors: Stieglitz, K.A., Xia, J., Kantrowitz, E.R.
PDB entry 3d7t: Structural basis for the recognition of c-Src by its inactivator Csk
Classification: TRANSFERASE
Source organism: Gallus gallus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.899 Å
Deposited: 2008-05-21
Authors: Levinson, N.M., Seeliger, M.A., Cole, P.A., Kuriyan, J.
PDB entry 3d7u: Structural basis for the recognition of c-Src by its inactivator Csk
Classification: TRANSFERASE
Source organism: Gallus gallus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.111 Å
Deposited: 2008-05-21
Authors: Levinson, N.M., Seeliger, M.A., Cole, P.A., Kuriyan, J.
PDB entry 3d7v: Crystal structure of Mcl-1 in complex with an Mcl-1 selective BH3 ligand
Classification: APOPTOSIS
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2008-05-22
Authors: Lee, E.F., Czabotar, P.E., Colman, P.M., Fairlie, W.D.
PDB entry 3d7w: Mistletoe Lectin I in Complex with Zeatin
Classification: HYDROLASE
Source organism: Viscum album
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2008-05-22
Authors: Meyer, A., Rypniewski, W., Szymanski, M., Voelter, W., Barciszewski, J., Betzel, C.
PDB entry 3d7z: Crystal Structure of P38 Kinase in Complex with a biphenyl amide inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-22
Authors: Somers, D.O., Patel, S.
PDB entry 3d80: Structural Analysis of a Holo Enzyme Complex of Mouse Dihydrofolate Reductase with NADPH and a Ternary Complex wtih the Potent and Selective Inhibitor 2,4-Diamino-6-(2'-hydroxydibenz[b,f]azepin-5-yl)methylpteridine
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-05-22
Authors: Cody, V.
PDB entry 3d81: Sir2-S-alkylamidate complex crystal structure
Classification: HYDROLASE
Source organism: Thermotoga maritima; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-05-22
Authors: Hawse, W.F., Hoff, K.G., Fatkins, D., Daines, A., Zubkova, O.V., Schramm, V.L., Zheng, W., Wolberger, C.
PDB entry 3d82: Crystal structure of a cupin-2 domain containing protein (sfri_3543) from shewanella frigidimarina ncimb 400 at 2.05 A resolution
Classification: METAL BINDING PROTEIN
Source organism: Shewanella frigidimarina NCIMB 400
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-05-22
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3d83: Crystal structure of P38 kinase in complex with a biphenyl amide inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-22
Authors: Somers, D.O.
PDB entry 3d84: Structural Analysis of a Holo Enzyme Complex of Mouse Dihydrofolate Reductase with NADPH and a Ternary Complex with the Potent and Selective Inhibitor 2.4-Diamino-6-(-2'-hydroxydibenz[b,f]azepin-5-yl)methylpteridine
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-22
Authors: Cody, V.
PDB entry 3d85: Crystal structure of IL-23 in complex with neutralizing FAB
Classification: IMMUNE SYSTEM/CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-22
Authors: Beyer, B.M., Ingram, R., Ramanathan, L., Reichert, P., Le, H., Madison, V.
PDB entry 3d87: Crystal structure of Interleukin-23
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-05-22
Authors: Beyer, B.M., Ingram, R., Ramanathan, L., Reichert, P., Le, H., Madison, V.
PDB entry 3d89: Crystal Structure of a Soluble Rieske Ferredoxin from Mus musculus
Classification: ELECTRON TRANSPORT
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.071 Å
Deposited: 2008-05-22
Authors: Levin, E.J., McCoy, J.G., Elsen, N.L., Seder, K.D., Bingman, C.A., Wesenberg, G.E., Fox, B.G., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 3d8a: Co-crystal structure of TraM-TraD complex.
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12); Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-05-22
Authors: Glover, J.N.M., Lu, J., Wong, J.J., Edwards, R.A.
PDB entry 3d8b: Crystal structure of human fidgetin-like protein 1 in complex with ADP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-23
Authors: Karlberg, T., Wisniewska, M., Andersson, J., Arrowsmith, C.H., Berglund, H., Busam, R.D., Collins, R., Dahlgren, L.G., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Kallas, A., Kotenyova, T., Lehtio, L., Moche, M., Nilsson, M.E., Nordlund, P., Nyman, T., Olesen, K., Persson, C., Sagemark, J., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Welin, M., Wikstrom, M., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3d8c: Factor inhibiting HIF-1 alpha D201G mutant in complex with ZN(II), alpha-ketoglutarate and HIF-1 alpha 19mer
Classification: TRANSCRIPTION REGULATOR, OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-23
Authors: McDonough, M.A., Chowdhury, R., Schofield, C.J.
PDB entry 3d8d: Crystal structure of the human Fe65-PTB1 domain
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-23
Authors: Radzimanowski, J., Ravaud, S., Sinning, I., Wild, K.
PDB entry 3d8e: Crystal structure of the human Fe65-PTB1 domain (trigonal crystal form)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-05-23
Authors: Radzimanowski, J., Ravaud, S., Sinning, I., Wild, K.
PDB entry 3d8f: Crystal structure of the human Fe65-PTB1 domain with bound phosphate (trigonal crystal form)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-05-23
Authors: Radzimanowski, J., Ravaud, S., Sinning, I., Wild, K.
PDB entry 3d8g: Crystal structure of Staphylococcal nuclease variant Delta+PHS I72R at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus subsp. aureus MW2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2008-05-23
Authors: Harms, M.J., Schlessman, J.L., Garcia-Moreno, E.B.
PDB entry 3d8h: Crystal structure of phosphoglycerate mutase from Cryptosporidium parvum, cgd7_4270
Classification: ISOMERASE
Source organism: Cryptosporidium parvum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2008-05-23
Authors: Wernimont, A.K., Lew, J., Wasney, G., Alam, Z., Kozieradzki, I., Cossar, D., Schapiro, M., Bochkarev, A., Arrowsmith, C.H., Bountra, C., Wilkstrom, M., Edwards, A.M., Hui, R., Artz, J.D., Hills, T., Structural Genomics Consortium (SGC)
PDB entry 3d8k: Crystal structure of a phosphatase from a toxoplasma gondii
Classification: HYDROLASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2008-05-23
Authors: Damodharan, L., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3d8l: Crystal structure of ORF12 from the lactococcus lactis bacteriophage p2
Classification: VIRAL PROTEIN
Source organism: Lactococcus phage p2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-05-23
Authors: Siponen, M.I., Spinelli, S., Lichiere, J., Moineau, S., Cambillau, C., Campanacci, V.
PDB entry 3d8m: Crystal structure of a chimeric receptor binding protein from lactococcal phages subspecies TP901-1 and p2
Classification: VIRUS/VIRAL PROTEIN
Source organism: Lactococcus phage p2; Lactococcus phage TP901-1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2008-05-23
Authors: Siponen, M.I., Blangy, S., Spinelli, S., Cambillau, C., Campanacci, V.
PDB entry 3d8n: Uroporphyrinogen III Synthase-Uroporphyringen III Complex
Classification: LYASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-23
Authors: Schubert, H.L.
PDB entry 3d8p: Crystal structure of acetyltransferase of GNAT family (NP_373092.1) from STAPHYLOCOCCUS AUREUS MU50 at 2.20 A resolution
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-23
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3d8r: Thermus thermophilus Uroporphyrinogen III Synthase
Classification: LYASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-23
Authors: Schubert, H.L.
PDB entry 3d8s: Thermus thermophilus Uroporphyrinogen III Synthase
Classification: LYASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-23
Authors: Schubert, H.L.
PDB entry 3d8t: Thermus thermophilus Uroporphyrinogen III Synthase
Classification: LYASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-23
Authors: Schubert, H.L.
PDB entry 3d8u: The crystal structure of a PurR family transcriptional regulator from Vibrio parahaemolyticus RIMD 2210633
Classification: transcription regulator
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2008-05-23
Authors: Tan, K., Hatzos, C., Moy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d8v: Crystal structure of GlmU from Mycobacterium tuberculosis in complex with uridine-diphosphate-N-acetylglucosamine
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-05-25
Authors: Zhang, Z., Squire, C.J., Baker, E.N.
PDB entry 3d8w: Use of a carbonic Anhydrase II, IX Active-site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-26
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.
PDB entry 3d8x: Crystal Structure of Saccharomyces cerevisiae NDPPH Dependent Thioredoxin Reductase 1
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-05-26
Authors: Zhang, Z.Y., Bao, R., Yu, J., Chen, Y.X., Zhou, C.-Z.
PDB entry 3d8y: RNase A- 5'-Deoxy-5'-N-piperidinothymidine complex
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2008-05-26
Authors: Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G.
PDB entry 3d8z: RNase A- 5'-Deoxy-5'-N-pyrrolidinothymidine complex
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2008-05-26
Authors: Leonidas, D.D., Zographos, S.E., Oikonomakos, N.G.
PDB entry 3d90: Crystal structure of the human progesterone receptor ligand-binding domain bound to levonorgestrel
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2008-05-26
Authors: Petit-Topin, I., Turque, N., Ulman, A., Gainer, E., Rafestin-Oblin, M.E., Fagart, J.
PDB entry 3d91: Human renin in complex with remikiren
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-26
Authors: Prade, L., Bezencon, O., Bur, D., Weller, T., Fischli, W., Remen, L.
PDB entry 3d92: Human carbonic anhydrase II bound with substrate carbon dioxide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2008-05-26
Authors: Domsic, J.F., Avvaru, B.S., McKenna, R.
PDB entry 3d93: Apo Human carbonic anhydrase II bound with substrate carbon dioxide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2008-05-26
Authors: Domsic, J.F., Avvaru, B.S., McKenna, R.
PDB entry 3d94: Crystal structure of the insulin-like growth factor-1 receptor kinase in complex with PQIP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-26
Authors: Wu, J., Li, W., Miller, W.T., Hubbard, S.R.
PDB entry 3d95: Crystal Structure of the R132K:Y134F:R111L:L121E:T54V Mutant of Apo-Cellular Retinoic Acid Binding Protein Type II at 1.20 Angstroms Resolution
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-05-26
Authors: Vaezeslami, S., Geiger, J.H.
PDB entry 3d96: Crystal Structure of the R132K:Y134F Mutant of Apo-Cellular Retinoic Acid Binding Protein Type II at 1.71 Angstroms Resolution
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2008-05-26
Authors: Vaezeslami, S., Geiger, J.H.
PDB entry 3d97: Crystal Structure of the R132K:R111L:L121E Mutant of Apo-Cellular Retinoic Acid Binding Protein Type II At 1.50 Angstroms Resolution
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-05-26
Authors: Vaezeslami, S., Geiger, J.H.
PDB entry 3d98: Crystal structure of GlmU from Mycobacterium tuberculosis, ligand-free form
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-05-27
Authors: Zhang, Z., Squire, C.J., Baker, E.N.
PDB entry 3d9a: High Resolution Crystal Structure Structure of HyHel10 Fab Complexed to Hen Egg Lysozyme
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Gallus gallus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-05-27
Authors: DeSantis, M.E., Li, M., Shanmuganathan, A., Acchione, M., Walter, R., Wlodawer, A., Smith-Gill, S.
PDB entry 3d9b: Symmetric structure of E. coli AcrB
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2008-05-27
Authors: Veesler, D., Blangy, S., Cambillau, C., Sciara, G.
PDB entry 3d9c: Crystal Structure PTP1B complex with aryl Seleninic acid
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-27
Authors: Abdo, M., Liu, S., Zhou, B., Walls, C.D., Knapp, S., Zhang, Z.-Y.
PDB entry 3d9d: Nitroalkane oxidase: mutant D402N crystallized with 1-nitrohexane
Classification: OXIDOREDUCTASE
Source organism: Fusarium oxysporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-27
Authors: Heroux, A., Bozinovski, D.M., Valley, M.P., Fitzpatrick, P.F., Orville, A.M.
PDB entry 3d9e: Nitroalkane oxidase: active site mutant D402N crystallized with 1-nitrooctane
Classification: OXIDOREDUCTASE
Source organism: Fusarium oxysporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-27
Authors: Heroux, A., Bozinovski, D.M., Valley, M.P., Fitzpatrick, P.F., Orville, A.M.
PDB entry 3d9f: Nitroalkane oxidase: active site mutant S276A crystallized with 1-nitrohexane
Classification: OXIDOREDUCTASE
Source organism: Fusarium oxysporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-27
Authors: Heroux, A., Bozinovski, D.M., Valley, M.P., Fitzpatrick, P.F., Orville, A.M.
PDB entry 3d9g: Nitroalkane oxidase: wild type crystallized in a trapped state forming a cyanoadduct with FAD
Classification: OXIDOREDUCTASE
Source organism: Fusarium oxysporum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-05-27
Authors: Heroux, A., Bozinovski, D.M., Valley, M.P., Fitzpatrick, P.F., Orville, A.M.
PDB entry 3d9h: Crystal Structure of the Splice Variant of Human ASB9 (hASB9-2), an Ankyrin Repeat Protein
Classification: STRUCTURAL PROTEIN, PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-27
Authors: Fei, X., Gu, X., Fan, S., Zhang, C., Ji, C.
PDB entry 3d9i: Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.907 Å
Deposited: 2008-05-27
Authors: Becker, R., Loll, B., Meinhart, A.
PDB entry 3d9j: Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-27
Authors: Becker, R., Loll, B., Meinhart, A.
PDB entry 3d9k: Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-27
Authors: Becker, R., Loll, B., Meinhart, A.
PDB entry 3d9l: Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II
Classification: Transcription/peptide
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-27
Authors: Becker, R., Loll, B., Meinhart, A.
PDB entry 3d9m: Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-05-27
Authors: Becker, R., Loll, B., Meinhart, A.
PDB entry 3d9n: Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-27
Authors: Becker, R., Loll, B., Meinhart, A.
PDB entry 3d9o: Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-27
Authors: Becker, R., Loll, B., Meinhart, A.
PDB entry 3d9p: Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the Carboxy-Terminal Domain of RNA-Polymerase II
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-27
Authors: Becker, R., Loll, B., Meinhart, A.
PDB entry 3d9q: Proteinase K by LB nanotemplate method before high X-Ray dose on ESRF ID23-1 beamline
Classification: HYDROLASE
Source organism: Engyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2008-05-27
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3d9r: Crystal structure of ketosteroid isomerase-like protein (YP_049581.1) from ERWINIA CAROTOVORA ATROSEPTICA SCRI1043 at 2.40 A resolution
Classification: ISOMERASE
Source organism: Pectobacterium atrosepticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-05-27
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3d9s: Human Aquaporin 5 (AQP5) - High Resolution X-ray Structure
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-27
Authors: Horsefield, R., Norden, K., Fellert, M., Backmark, A., Tornroth-Horsefield, S., Terwisscha Van Scheltinga, A.C., Kvassman, J., Kjellbom, P., Johanson, U., Neutze, R.
PDB entry 3d9t: CIAP1-BIR3 in complex with N-terminal peptide from Caspase-9 (ATPFQE)
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-05-27
Authors: Kulathila, R., Price, A.
PDB entry 3d9u: The BIR3 domain of cIAP1 in complex with the N terminal peptide from SMAC/DIABLO (AVPIAQ).
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-27
Authors: Kulathila, R., Price, A.
PDB entry 3d9v: CRYSTAL STRUCTURE OF ROCK I BOUND TO H-1152P A DI-METHYLATED VARIANT OF FASUDIL
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-05-27
Authors: Jacobs, M.
PDB entry 3d9w: Crystal Structure Analysis of Nocardia farcinica Arylamine N-acetyltransferase
Classification: TRANSFERASE
Source organism: Nocardia farcinica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-05-28
Authors: Li de la Sierra-Gallay, I., Pluvinage, B., Rodrigues-Lima, F., Martins, M., Dupret, J.M.
PDB entry 3d9x: Structure of the head of the Bartonella adhesin BadA
Classification: CELL ADHESION
Source organism: Bartonella henselae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2008-05-28
Authors: Zeth, K., Lupas, A., Martin, J.
PDB entry 3d9y: Crystal Structure of Profilin from Schizosaccharomyces pombe
Classification: PROTEIN BINDING
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-05-28
Authors: Ezezika, O.C., Nolen, B.J., Pollard, T.D.
PDB entry 3d9z: Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-05-28
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.
PDB entry 3da0: Crystal structure of a cleaved form of a chimeric receptor binding protein from Lactococcal phages subspecies TP901-1 and p2
Classification: VIRAL PROTEIN
Source organism: Lactococcus phage p2; Lactococcus phage TP901-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-05-28
Authors: Siponen, M.I., Blangy, S., Spinelli, S., Vera, L., Cambillau, C., Campanacci, V.
PDB entry 3da1: X-Ray structure of the glycerol-3-phosphate dehydrogenase from Bacillus halodurans complexed with FAD. Northeast Structural Genomics Consortium target BhR167.
Classification: OXIDOREDUCTASE
Source organism: Bacillus halodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-05-28
Authors: Kuzin, A.P., Abashidze, M., Seetharaman, J., Wang, D., Janjua, H., Owens, L., Xiao, R., Nair, R., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3da2: X-ray structure of human carbonic anhydrase 13 in complex with inhibitor
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-05-28
Authors: Pilka, E.S., Picaud, S.S., Yue, W.W., King, O.N.F., Bray, J.E., Filippakopoulos, P., Roos, A.K., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Wikstrom, M., Edwards, A.M., Bountra, C., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 3da3: Crystal Structure of Colicin M, A Novel Phosphatase Specifically Imported by Escherichia Coli
Classification: ANTIBIOTIC
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-05-28
Authors: Zeth, K., Albrecht, R., Romer, C., Braun, V.
PDB entry 3da4: Crystal Structure of Colicin M, a Novel Phosphatase Specifically Imported by Escherichia Coli
Classification: ANTIBIOTIC
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-28
Authors: Zeth, K., Albrecht, R., Romer, C., Braun, V.
PDB entry 3da5: Crystal Structure of Piwi/Argonaute/Zwille(PAZ) domain from Thermococcus thioreducens
Classification: RNA BINDING PROTEIN
Source organism: Thermococcus thioreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2008-05-28
Authors: Hughes, R.C., Ng, J.D.
PDB entry 3da6: Crystal Structure of human JNK3 complexed with N-(3-methyl-4-(3-(2-(methylamino)pyrimidin-4-yl)pyridin-2-yloxy)naphthalen-1-yl)-1H-benzo[d]imidazol-2-amine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-28
Authors: Cee, V.J., Cheng, A.C., Romero, K., Bellon, S., Mohr, C., Whittington, D.A., Bready, J., Caenepeel, S., Coxon, A., Deak, H.L., Hodous, B.L., Kim, J.L., Lin, J., Nguyen, H., Olivieri, P.R., Patel, V.F., Wang, L., Hughes, P., Geuns-Meyer, S.
PDB entry 3da7: A conformationally strained, circular permutant of barnase
Classification: PROTEIN BINDING
Source organism: Bacillus amyloliquefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-05-28
Authors: Mitrousis, G., Butler, J., Loh, S.N., Cingolani, G.
PDB entry 3da8: Crystal structure of PurN from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-05-28
Authors: Zhang, Z., Squire, C.J., Baker, E.N.
PDB entry 3da9: Crystal structure of thrombin in complex with inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-29
Authors: Xue, Y., Hansson, S.K.
PDB entry 3daa: CRYSTALLOGRAPHIC STRUCTURE OF D-AMINO ACID AMINOTRANSFERASE INACTIVATED BY PYRIDOXYL-D-ALANINE
Classification: AMINOTRANSFERASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1998-01-20
Authors: Peisach, D., Chipman, D.M., Ringe, D.
PDB entry 3dab: Structure of the human Mdmx protein bound to the p53 tumor suppressor transactivation domain
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-29
Authors: Popowicz, G.M., Czarna, A., Holak, T.A.
PDB entry 3dac: Structure of the human Mdmx protein bound to the p53 tumor suppressor transactivation domain
Classification: CELL CYCLE
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-29
Authors: Popowicz, G.M., Czarna, A., Holak, T.A.
PDB entry 3dad: Crystal structure of the N-terminal regulatory domains of the formin FHOD1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-29
Authors: Schulte, A., Stolp, B., Schonichen, A., Pylypenko, O., Rak, A., Fackler, O.T., Geyer, M.
PDB entry 3dae: Crystal structure of phosphorylated SNF1 kinase domain
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.899 Å
Deposited: 2008-05-29
Authors: Zheng, L.-S., Chen, L., Jiao, Z.-H., Wu, J.-W.
PDB entry 3daf: The crystal structure of [Fe]-hydrogenase holoenzyme (HMD) from METHANOCALDOCOCCUS JANNASCHII cocrystallized with cyanide
Classification: OXIDOREDUCTASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-05-29
Authors: Pilak, O., Warkentin, E., Shima, S., Thauer, R.K., Ermler, U.
PDB entry 3dag: The crystal structure of [Fe]-hydrogenase holoenzyme (HMD) from METHANOCALDOCOCCUS JANNASCHII
Classification: OXIDOREDUCTASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-05-29
Authors: Pilak, O., Warkentin, E., Shima, S., Thauer, R.K., Ermler, U.
PDB entry 3dah: 2.3 A crystal structure of ribose-phosphate pyrophosphokinase from Burkholderia pseudomallei
Classification: TRANSFERASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3dai: Crystal structure of the bromodomain of the human ATAD2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-05-29
Authors: Filippakopoulos, P., Keates, T., Picaud, S., Fedorov, O., Roos, A.K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3daj: Crystal structure of Aurora A complexed with an inhibitor discovered through site-directed dynamic tethering
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-29
Authors: He, M.M.
PDB entry 3dak: Crystal Structure of Domain-Swapped OSR1 kinase domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-05-29
Authors: Lee, S., Cobb, M.H., Goldsmith, E.J.
PDB entry 3dal: Methyltransferase domain of human PR domain-containing protein 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-05-29
Authors: Amaya, M.F., Zeng, H., Antoshenko, T., Dong, A., Loppnau, P., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Min, J., Plotnikov, A.N., Wu, H., Structural Genomics Consortium (SGC)
PDB entry 3dam: Crystal Structure of Allene oxide synthase
Classification: LIGASE
Source organism: Parthenium argentatum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-05-29
Authors: Li, L., Wang, X.
PDB entry 3dan: Crystal Structure of Allene oxide synthase
Classification: LYASE
Source organism: Parthenium argentatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-29
Authors: Li, L., Wang, X.
PDB entry 3dao: CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHATE (EUBREC_1417) FROM EUBACTERIUM RECTALE AT 1.80 A RESOLUTION
Classification: HYDROLASE
Source organism: Eubacterium rectale
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-29
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dap: C. GLUTAMICUM DAP DEHYDROGENASE IN COMPLEX WITH NADP+ AND THE INHIBITOR 5S-ISOXAZOLINE
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium glutamicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1997-12-29
Authors: Scapin, G., Cirilli, M., Reddy, S.G., Gao, Y., Vederas, J.C., Blanchard, J.S.
PDB entry 3daq: Crystal structure of dihydrodipicolinate synthase from methicillin-resistant Staphylococcus aureus
Classification: LYASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-05-29
Authors: Dobson, R.C.J., Burgess, B.R., Jameson, G.B., Gerrard, J.A., Parker, M.W., Perugini, M.A.
PDB entry 3dar: Crystal structure of D2 domain from human FGFR2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-30
Authors: Brown, A., Blundell, T.L.
PDB entry 3das: Structure of the PQQ-bound form of Aldose Sugar Dehydrogenase (Adh) from Streptomyces coelicolor
Classification: OXIDOREDUCTASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-30
Authors: Southall, S.M., Doel, J.J., Oubrie, A., Richardson, D.J.
PDB entry 3dat: Crystal structure of the ternary MTX NADPH complex of Bacillus anthracis dihydrofolate reductase
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis str.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-30
Authors: Bennett, B.C., Dealwis, C.G.
PDB entry 3dau: Crystal structure of the ternary MTX NADPH complex of Escherichia coli dihydrofolate reductase
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-05-30
Authors: Bennett, B.C., Dealwis, C.G.
PDB entry 3dav: Schizosaccharomyces Pombe Profilin crystallized from Sodium formate
Classification: PROTEIN BINDING
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-30
Authors: Ezezika, O.C., Nolen, B.J., Pollard, T.D.
PDB entry 3daw: Structure of the actin-depolymerizing factor homology domain in complex with actin
Classification: STRUCTURAL PROTEIN/STRUCTURAL PROTEIN REGULATOR
Source organism: Mus musculus; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-05-30
Authors: Paavilainen, V.O., Oksanen, E., Goldman, A., Lappalainen, P.
PDB entry 3dax: Crystal structure of human CYP7A1
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-05-30
Authors: Strushkevich, N.V., Tempel, W., Dombrovski, L., Dong, A., Loppnau, P., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Wilkstrom, M., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3day: Crystal structure of human acyl-CoA synthetase medium-chain family member 2A (L64P mutation) in complex with AMP-CPP
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-05-30
Authors: Pilka, E.S., Kochan, G.T., Yue, W.W., Bhatia, C., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Wikstrom, M., Bountra, C., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 3daz: Use of Carbonic Anhydrase II, IX Active-Site Mimic, for the Purpose of Screening Inhibitors for Possible Anti-Cancer Properties
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-30
Authors: Genis, C., Sippel, K.H., Case, N., Govindasamy, L., Agbandje-Mckenna, M., Mckenna, R.