LiteFold/PDB huggingface dataset:
PDB entry 8hwn: aldo-keto reductase DepB
Classification: TOXIN
Source organism: Devosia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-12-31
Authors: Chen, M., Yang, H., Lu, F.
PDB entry 8hwo: Crystal Structure of mutant GDSL Esterase of Photobacterium sp. J15
Classification: HYDROLASE
Source organism: Photobacterium sp. J15
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-01-01
Authors: Rahman, N.N.A., Leow, T.C., Jonet, M.A.
PDB entry 8hwp: Crystal Structure of Mutant GDSL Esterase of Photobacterium sp. J15 S12A in Complex with Butyrate
Classification: HYDROLASE
Source organism: Photobacterium sp. J15
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2023-01-02
Authors: Rahman, N.N.A., Leow, T.C., Jonet, M.A.
PDB entry 8hwq: Cryo-EM structure of human pannexin 3 with C-terminal truncated
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2023-01-02
Authors: Zhang, H., Zhang, H., Wang, D.
PDB entry 8hwr: Crystal structure of AtHPPD-Y191193 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2023-01-02
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hws: The complex structure of Omicron BA.4 RBD with BD604, S309, and S304
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.36 Å
Deposited: 2023-01-02
Authors: He, Q.W., Xu, Z.P., Xie, Y.F.
PDB entry 8hwt: SARS-CoV-2 Omicron BA.2 RBD complexed with BD-604 and S304 Fab
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2023-01-02
Authors: He, Q.W., Xie, Y.
PDB entry 8hwu: Solution structure of frog peptide LL-TIL
Classification: HYDROLASE
Source organism: Lepidobatrachus laevis
Experimental method: SOLUTION NMR
Deposited: 2023-01-03
Authors: Rami, M.J., Sarma, S.P.
PDB entry 8hwy: Ancestral imine reductase mutant N559_M6
Classification: OXIDOREDUCTASE
Source organism: Escherichia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2023-01-03
Authors: Zhu, X.X.
PDB entry 8hwz: Cryo-EM structure of delta N15 MsDps2 of Mycobacterium smegmatis
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2023-01-03
Authors: Garg, P., Dutta, S.
PDB entry 8hx0: Cryo-EM structure of MsDps2 from Mycobacterium smegmatis
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-01-03
Authors: Garg, P., Dutta, S.
PDB entry 8hx1: Focused cryo-EM map of MsDps2 from MsDps2-DNA complex of Mycobacterium smegmatis
Classification: DNA BINDING PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-01-03
Authors: Dutta, S., Garg, P.
PDB entry 8hx2: Crystal structure of AtHPPD-Y18405 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.996 Å
Deposited: 2023-01-03
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hx3: crystal structure of secreted coleopteran active protein (Sip)
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2023-01-03
Authors: Chen, Z., Jiang, K., Gao, X.
PDB entry 8hx4: Crystal structure of AtHPPD-Y18549 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.896 Å
Deposited: 2023-01-03
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hx5: Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-(4-methoxybenzyl)thiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-01-04
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hx6: Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae
Classification: TRANSFERASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-01-04
Authors: Nakamichi, Y., Watanabe, M.
PDB entry 8hx7: Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae co-crystallized with L-glutamine
Classification: TRANSFERASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-01-04
Authors: Nakamichi, Y., Watanabe, M.
PDB entry 8hx8: Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae co-crystallized with chorismate
Classification: TRANSFERASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-01-04
Authors: Nakamichi, Y., Watanabe, M.
PDB entry 8hx9: Crystal structure of 4-amino-4-deoxychorismate synthase from Streptomyces venezuelae with chorismate
Classification: TRANSFERASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2023-01-04
Authors: Nakamichi, Y., Watanabe, M.
PDB entry 8hxa: Cryo-EM structure of MPXV M2 in complex with human B7.1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-01-04
Authors: Wang, Y., Yang, S., Zhao, H., Deng, Z.
PDB entry 8hxb: Cryo-EM structure of MPXV M2 hexamer in complex with human B7.2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-01-04
Authors: Wang, Y., Yang, S., Zhao, H., Deng, Z.
PDB entry 8hxc: Cryo-EM structure of MPXV M2 heptamer in complex with human B7.2
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-01-04
Authors: Wang, Y., Yang, S., Zhao, H., Deng, Z.
PDB entry 8hxe: Crystal structure of B3 L1 MBL in complex with 2-amino-5-(4-propylbenzyl)thiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.382 Å
Deposited: 2023-01-04
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hxf: Crystal structure of AtHPPD-Y181188 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.697 Å
Deposited: 2023-01-04
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hxg: Crystal structure of AtHPPD-Y14116 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.702 Å
Deposited: 2023-01-04
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hxh: Crystal structure of AtHPPD-Y18024 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.992 Å
Deposited: 2023-01-04
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hxi: Crystal structure of B3 L1 MBL in complex with 2-amino-5-(4-isopropylbenzyl)thiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-01-04
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hxj: BANAL-20-52 Spike trimer
Classification: VIRAL PROTEIN
Source organism: unclassified Coronavirinae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-01-04
Authors: Wang, X., Xu, G.
PDB entry 8hxk: BANAL-20-236 S1 in complex with R. Affinis ACE2
Classification: VIRAL PROTEIN
Source organism: Rhinolophus affinis; unclassified Coronavirinae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-01-04
Authors: Wang, X., Xu, G.
PDB entry 8hxn: Crystal structure of B2 Sfh-I MBL in complex with 2-amino-5-(4-(but-3-en-1-yloxy)benzyl)thiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Serratia fonticola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-01-05
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hxo: Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-isobutylthiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.902 Å
Deposited: 2023-01-05
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hxp: Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-(but-3-en-1-yl)thiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-01-05
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hxq: Nanobody1 in complex with human BCMA ECD
Classification: IMMUNE SYSTEM
Source organism: Vicugna pacos; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-01-05
Authors: Sun, Y., Zhang, B.
PDB entry 8hxr: Nanobody2 in complex with human BCMA ECD
Classification: IMMUNE SYSTEM
Source organism: Vicugna pacos; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-01-05
Authors: Sun, Y., Zhang, B.
PDB entry 8hxs: Small_spotted catshark CD8alpha
Classification: CYTOKINE
Source organism: Scyliorhinus canicula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-01-05
Authors: Wang, J., Zou, J.
PDB entry 8hxu: Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-pentylthiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.945 Å
Deposited: 2023-01-05
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hxv: Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-hexylthiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.603 Å
Deposited: 2023-01-05
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hxw: Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-heptylthiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2023-01-05
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hxx: Cryo-EM structure of the histone deacetylase complex Rpd3S
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-01-05
Authors: Cui, H., Wang, H.
PDB entry 8hxy: Cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-01-05
Authors: Cui, H., Wang, H.
PDB entry 8hxz: Cryo-EM structure of Eaf3 CHD in complex with nucleosome
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-01-05
Authors: Cui, H., Wang, H.
PDB entry 8hy0: Composite cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-01-05
Authors: Cui, H., Wang, H.
PDB entry 8hy1: Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-(thiophen-2-ylmethyl)thiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.937 Å
Deposited: 2023-01-05
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hy2: Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-phenethylthiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-05
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hy3: Crystal structure of human secretory glutaminyl cyclase in complex with 1-benzyl-5-methyl-1H-imidazole
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.952 Å
Deposited: 2023-01-05
Authors: Li, G.-B., Deng, J.
PDB entry 8hy4: Crystal structure of human transthyretin variant A97S at pH 7.6
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2023-01-05
Authors: Wang, Y.S., Huang, C.H., Tzeng, S.R.
PDB entry 8hy5: Structure of D-amino acid oxidase mutant R38H
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-01-05
Authors: Khan, S., Upadhyay, S., Dave, U., Kumar, A., Gomes, J.
PDB entry 8hy6: Crystal structure of B1 NDM-1 MBL in complex with 2-amino-5-phenethylthiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-01-05
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hy7: EGFR kinase domain mutant ""TMLR"" with compound 28f
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2023-01-06
Authors: Wang, Y.X., Wu, C.Y.
PDB entry 8hy8: Bacterial STING from Epilithonimonas lactis
Classification: SIGNALING PROTEIN
Source organism: Epilithonimonas lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.568 Å
Deposited: 2023-01-06
Authors: Wang, Y.-C., Yang, C.-S., Hou, M.-H., Chen, Y.
PDB entry 8hy9: Bacterial STING from Riemerella anatipestifer in complex with 3'3'-c-di-GMP
Classification: SIGNALING PROTEIN
Source organism: Riemerella anatipestifer Yb2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.462 Å
Deposited: 2023-01-06
Authors: Wang, Y.-C., Yang, C.-S., Hou, M.-H., Chen, Y.
PDB entry 8hya: Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state, with expanded TMD
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-01-06
Authors: Wang, Y., Zhao, Y., Gao, Y.
PDB entry 8hyb: Crystal structure of B1 IMP-1 MBL in complex with 2-amino-5-phenethylthiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.193 Å
Deposited: 2023-01-06
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hyc: Crystal structure of B1 NDM-1 MBL in complex with 2-amino-5-(2-(thiophen-2-yl)ethyl)thiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.151 Å
Deposited: 2023-01-06
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hyd: Crystal structure of B1 VIM-2 MBL in complex with 2-amino-5-(2-(thiophen-2-yl)ethyl)thiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2023-01-06
Authors: Yan, Y.-H., Zhu, K.-R., Li, G.-B.
PDB entry 8hye: Structure of amino acid dehydrogenase-2752 with ligand
Classification: OXIDOREDUCTASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-01-06
Authors: Sakuraba, H., Ohshima, T.
PDB entry 8hyf: Crystal Structure of Banana Lectin In-complex with Fucose at 2.95 A Resolution
Classification: SUGAR BINDING PROTEIN, ANTITUMOR PROTEIN
Source organism: Musa x paradisiaca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2023-01-06
Authors: Rasheed, S., Arif, R., Huda, N., Ahmad, M.S., Mateen, S.M.
PDB entry 8hyg: Crystal structure of protease-associated domain of Arabidopsis vacuolar sorting receptor 1 at pH 4.6
Classification: PROTEIN TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-01-06
Authors: Tsao, H.E., Lui, S.N., Wong, K.B.
PDB entry 8hyh: Structure of amino acid dehydrogenase3448
Classification: OXIDOREDUCTASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2023-01-06
Authors: Sakuraba, H., Ohshima, T.
PDB entry 8hyi: Crystal structure of human P-cadherin MEC12 (X dimer) in complex with 2-(2-methyl-5-phenyl-1H-indole-3-yl)ethan-1-amine
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-01-06
Authors: Senoo, A., Ito, S., Ueno, G., Nagatoishi, S., Tsumoto, K.
PDB entry 8hyj: A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-01-06
Authors: Zhang, H., Zhang, Y.
PDB entry 8hyk: CD-NTase EfCdnE in complex with intermediate pppU[2'-5']p
Classification: TRANSFERASE
Source organism: Enterococcus faecalis EnGen0062
Experimental method: X-RAY DIFFRACTION
Resolution: 2.021 Å
Deposited: 2023-01-06
Authors: Ko, T.-P., Wang, Y.-C., Yang, C.-S., Hou, M.-H., Chen, Y.
PDB entry 8hyl: Crystal structure of DO1 Fv-clasp fragment
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-06
Authors: Anan, Y., Lu, P., Nagata, K., Itakura, M., Uchida, K.
PDB entry 8hym: Crystal structure of AtHPPD-Y18030 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.794 Å
Deposited: 2023-01-07
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hyn: Bacterial STING from Riemerella anatipestifer
Classification: SIGNALING PROTEIN
Source organism: Riemerella anatipestifer Yb2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.089 Å
Deposited: 2023-01-07
Authors: Wang, Y.-C., Yang, C.-S., Hou, M.-H., Chen, Y.
PDB entry 8hyo: Crystal structure of AtHPPD-Y18031 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-07
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hyp: Crystal structure of AtHPPD-Y18400 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.749 Å
Deposited: 2023-01-07
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hyr: Crystal structure of human KARS apo
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-01-07
Authors: Zhang, X., Wang, Y.
PDB entry 8hys: Crystal structure of AtHPPD-Y19802 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-01-07
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hz1: Ambient temperature crystal structure of Escherichia coli CyaY
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-07
Authors: Shafiei, A., DeMirci, H.
PDB entry 8hz2: Tumor Necrosis Factor Receptor Associated Factor 6 (TRAF6) N-terminal Domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-01-07
Authors: Guven, O., Ciftci, H., DeMirci, H.
PDB entry 8hz4: The tetrameric structure of biotin carboxylase from Chloroflexus aurantiacus in complex with bicarbonate
Classification: LIGASE
Source organism: Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-01-08
Authors: Shen, J., Wu, W., Xu, X.
PDB entry 8hz5: The homodimer of a biotin carboxylase isoform from chloroflexus aurantiacus
Classification: LIGASE
Source organism: Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-01-08
Authors: Shen, J., Wu, W., Xu, X.
PDB entry 8hz6: Crystal structure of AtHPPD-QRY2089 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.605 Å
Deposited: 2023-01-08
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hz7: Crystal structure of AtHPPD-Y181135 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.802 Å
Deposited: 2023-01-08
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hz8: Structure of PPIA in complex with the peptide of NRF2
Classification: ISOMERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-01-08
Authors: Wanyan, W., Hui, M., Jin, H., Lu, W.
PDB entry 8hz9: Crystal structure of AtHPPD-Y181136 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.011 Å
Deposited: 2023-01-08
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hza: Crystal structure of AtHPPD-YH20326 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-01-08
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hzb: Formed alpha-synuclein fibrils after incubation with heparin for 1 hour (Hep-remod-1)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-01-08
Authors: Tao, Y.Q., Zhao, Q.Y., Liu, C., Li, D.
PDB entry 8hzc: Formed alpha-synuclein fibrils after incubation with heparin for 1 hour (Hep-remod-2)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-01-08
Authors: Tao, Y.Q., Zhao, Q.Y., Liu, C., Li, D.
PDB entry 8hzd: A new fluorescent RNA aptamer bound with N618
Classification: RNA
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-01-09
Authors: Song, Q.Q., Ren, A.M.
PDB entry 8hze: A new fluorescent RNA aptamer bound with N
Classification: RNA
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2023-01-09
Authors: Huang, K.Y., Ren, A.M.
PDB entry 8hzf: A new fluorescent RNA aptamer bound with N565
Classification: RNA
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-01-09
Authors: Huang, K.Y., Ren, A.M.
PDB entry 8hzj: A new fluorescent RNA aptamer bound with N571
Classification: RNA
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-01-09
Authors: Huang, K.Y., Ren, A.M.
PDB entry 8hzk: A new fluorescent RNA aptamer bound with N, iridium hexammine soak
Classification: RNA
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-09
Authors: Huang, K.Y., Ren, A.M.
PDB entry 8hzl: A new fluorescent RNA aptamer_III bound with N
Classification: RNA
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-01-09
Authors: Huang, K.Y., Ren, A.M.
PDB entry 8hzm: A new fluorescent RNA aptamer bound with N, manganese soak
Classification: RNA
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-01-09
Authors: Huang, K.Y., Ren, A.M.
PDB entry 8hzn: Mouse Pendrin bound chloride in inward state
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-01-09
Authors: Liu, Q.Y., Zhang, X., Sun, L., Chen, Z.G.
PDB entry 8hzq: Bacillus subtilis SepF protein assembly (wild type)
Classification: PROTEIN FIBRIL
Source organism: Bacillus subtilis
Experimental method: SOLID-STATE NMR
Deposited: 2023-01-09
Authors: Liu, W.
PDB entry 8hzr: Crystal structure of SARS-Cov-2 main protease S46F mutant in complex with PF07321332
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-01-09
Authors: Zeng, X.Y., Zhang, J., Li, J.
PDB entry 8hzs: Formed alpha-synuclein fibrils after incubation with heparin for 3 days (Hep-remod-3)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-01-09
Authors: Tao, Y.Q., Zhao, Q.Y., Liu, C., Li, D.
PDB entry 8hzt: Bacillus subtilis SepF protein assembly (G137N mutant)
Classification: PROTEIN FIBRIL
Source organism: Bacillus subtilis
Experimental method: SOLID-STATE NMR
Deposited: 2023-01-09
Authors: Liu, W.
PDB entry 8hzu: Crystal structure of AtHPPD-XHD complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.796 Å
Deposited: 2023-01-09
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8hzv: The crystal structure of a Radical SAM Enzyme DesII
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33002 Å
Deposited: 2023-01-09
Authors: Hou, X.L., Zhou, J.H.
PDB entry 8hzw: The NMR structure of noursinH11W peptide
Classification: UNKNOWN FUNCTION
Source organism: Streptomyces noursei ATCC 11455
Experimental method: SOLUTION NMR
Deposited: 2023-01-09
Authors: Yao, H., Li, Y., Zhang, T., Gao, J., Wang, H.
PDB entry 8hzx: Acyl-ACP synthetase structure-2
Classification: CYTOSOLIC PROTEIN
Source organism: Vibrio harveyi
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2023-01-09
Authors: Huang, H., Wang, C., Chang, S., Cui, T., Xu, Y., Zhang, H., Zhou, C., Zhang, X., Feng, Y.
PDB entry 8hzy: The crystal structure of a Radical SAM Enzyme DesII
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03979 Å
Deposited: 2023-01-10
Authors: Hou, X.L., Zhou, J.H.
PDB entry 8hzz: GuApiGT (UGT79B74)
Classification: PLANT PROTEIN
Source organism: Glycyrrhiza uralensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-01-10
Authors: Wang, H.T., Wang, Z.L., Li, F.D., Ye, M.
PDB entry 8i00: Crystal structure of A97S transthyretin
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-01-10
Authors: Agrawal, S., Yu, T.-Y.
PDB entry 8i01: Crystal structure of Escherichia coli glyoxylate carboligase
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-01-10
Authors: Kim, J.H., Kim, J.S.
PDB entry 8i02: Cryo-EM structure of the SIN3S complex from S. pombe
Classification: DNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-01-10
Authors: Wang, C., Guo, Z., Zhan, X.
PDB entry 8i03: Cryo-EM structure of the SIN3L complex from S. pombe
Classification: DNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-01-10
Authors: Wang, C., Guo, Z., Zhan, X.
PDB entry 8i04: Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with serine
Classification: TRANSFERASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-01-10
Authors: Toyomoto, T., Ono, K., Shiba, T., Momitani, K., Zhang, T., Tsutsuki, H., Ishikawa, T., Hoso, K., Hamada, K., Rahman, A., Zhong, H., Akaike, T., Yamamoto, K., Matsuoka, M., Hanaoka, K., Niidome, T., Sawa, T.
PDB entry 8i05: Crystal structure of Escherichia coli glyoxylate carboligase double mutant
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2023-01-10
Authors: Kim, J.H., Kim, J.S.
PDB entry 8i06: Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with CoA
Classification: TRANSFERASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-01-10
Authors: Toyomoto, T., Ono, K., Shiba, T., Momitani, K., Zhang, T., Tsutsuki, H., Ishikawa, T., Hoso, K., Hamada, K., Rahman, A., Zhong, H., Akaike, T., Yamamoto, K., Matsuoka, M., Hanaoka, K., Niidome, T., Sawa, T.
PDB entry 8i07: Crystal structure of Escherichia coli glyoxylate carboligase double mutant in complex with glycolaldehyde
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-01-10
Authors: Kim, J.H., Kim, J.S.
PDB entry 8i08: Crystal structure of Escherichia coli glyoxylate carboligase quadruple mutant
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2023-01-10
Authors: Kim, J.H., Kim, J.S.
PDB entry 8i09: Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with butyl gallate
Classification: TRANSFERASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-01-10
Authors: Toyomoto, T., Ono, K., Shiba, T., Momitani, K., Zhang, T., Tsutsuki, H., Ishikawa, T., Hoso, K., Hamada, K., Rahman, A., Zhong, H., Akaike, T., Yamamoto, K., Matsuoka, M., Hanaoka, K., Niidome, T., Sawa, T.
PDB entry 8i0a: Structure of alpha-L-Arabinofuranosidase from Trametes hirsuta
Classification: HYDROLASE
Source organism: Trametes hirsuta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-01-10
Authors: Liu, W., Lu, M.L., Si, Z.Y., Han, L.
PDB entry 8i0b: The crystal structure of human glutamate receptor 2 in complex with LT-102
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2023-01-10
Authors: Qi, X.Y., Wu, C.Y.
PDB entry 8i0c: Crystal structure of Aldo-keto reductase 1C3 complexed with compound S0703
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2023-01-10
Authors: Jiang, J., He, S., Liu, Y., Fang, P., Sun, H.
PDB entry 8i0d: Sb3GT1 375S/Q377H mutant complex with UDP-Glc
Classification: TRANSFERASE
Source organism: Scutellaria baicalensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2023-01-10
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 8i0e: Sb3GT1 complex with UDP
Classification: TRANSFERASE
Source organism: Scutellaria baicalensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-01-10
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 8i0g: Crystal structure of AtHPPD-Y19543 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.992 Å
Deposited: 2023-01-10
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8i0j: JB13GH39P28 mutant-D41G
Classification: HYDROLASE
Source organism: Sphingomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2023-01-11
Authors: Zhou, J.P., Cao, L.J., Lin, M.Y., Zhang, R., Huang, Z.X.
PDB entry 8i0k: Cryo-electron microscopic structure of the 2-oxoglutarate dehydrogenase(E1) with TCAIM complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-01-11
Authors: Yu, X., Yang, W., Zhong, Y.H., Ma, X.M., Gao, Y.Z.
PDB entry 8i0l: Structure of CDK9/cyclin T1 in complex with inhibitor
Classification: CELL INVASION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2023-01-11
Authors: Jiang, C., Ye, Y., Huang, Y.
PDB entry 8i0m: Structure of CDK6 in complex with inhibitor
Classification: CELL CYCLE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7772 Å
Deposited: 2023-01-11
Authors: Jiang, C., Ye, Y., Huang, Y.
PDB entry 8i0n: Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1 (Local refine)
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-01-11
Authors: Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
PDB entry 8i0o: Crystal structure of Transthyretin variant A97S in monomeric form
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-01-11
Authors: Agrawal, S., Yu, T.-Y.
PDB entry 8i0p: The cryo-EM structure of human pre-Bact complex
Classification: SPLICING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-01-11
Authors: Zhan, X., Lu, Y., Shi, Y.
PDB entry 8i0q: Structure of beta-arrestin1 in complex with a phosphopeptide corresponding to the human C-X-C chemokine receptor type 4, CXCR4 (Local refine)
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.45 Å
Deposited: 2023-01-11
Authors: Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
PDB entry 8i0r: The cryo-EM structure of human Bact-I complex
Classification: SPLICING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-01-11
Authors: Zhan, X., Lu, Y., Shi, Y.
PDB entry 8i0s: The cryo-EM structure of human Bact-II complex
Classification: SPLICING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-01-11
Authors: Zhan, X., Lu, Y., Shi, Y.
PDB entry 8i0t: The cryo-EM structure of human Bact-III complex
Classification: SPLICING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-01-11
Authors: Zhan, X., Lu, Y., Shi, Y.
PDB entry 8i0u: The cryo-EM structure of human Bact-IV complex
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-01-11
Authors: Zhan, X., Lu, Y., Shi, Y.
PDB entry 8i0v: The cryo-EM structure of human post-Bact complex
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-01-11
Authors: Zhan, X., Lu, Y., Shi, Y.
PDB entry 8i0w: The cryo-EM structure of human C complex
Classification: SPLICING
Source organism: Homo sapiens; unidentified adenovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-01-11
Authors: Zhan, X., Lu, Y., Shi, Y.
PDB entry 8i0x: Beta-Xylosidase JB13GH39P28 showing salt/ethanol/trypsin tolerance, low-pH/low-Temperature activity, and transformation of notoginsenosides
Classification: HYDROLASE
Source organism: Sphingomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-11
Authors: Zhou, J.P., Cao, L.J., Lin, M.Y., Zhang, R., Huang, Z.X.
PDB entry 8i0y: Crystal structure of AtHPPD-Y191713 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.792 Å
Deposited: 2023-01-11
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8i0z: Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human C5a anaphylatoxin chemotactic receptor 1, C5aR1 (Local refine)
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.33 Å
Deposited: 2023-01-12
Authors: Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
PDB entry 8i10: Structure of beta-arrestin2 in complex with a phosphopeptide corresponding to the human Vasopressin V2 receptor, V2R (Local refine)
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2023-01-12
Authors: Maharana, J., Sarma, P., Yadav, M.K., Banerjee, R., Shukla, A.K.
PDB entry 8i11: Crystal structure of LOV1 domain of phototropin from Klebsormidium nitens
Classification: FLAVOPROTEIN
Source organism: Klebsormidium nitens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.855 Å
Deposited: 2023-01-12
Authors: Gautam, A.K., Sharma, S., Gourinath, S., Kateriya, S.
PDB entry 8i12: InuAMN8
Classification: HYDROLASE
Source organism: Arthrobacter sp. MN8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2023-01-12
Authors: Zhou, J.P., Cen, X.L., He, L.M., Zhang, R., Huang, Z.X.
PDB entry 8i13: Cryo-EM structure of 6-subunit Smc5/6
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.9 Å
Deposited: 2023-01-12
Authors: Qian, L., Jun, Z., Xiang, Z., Cheng, T., Zhaoning, W., Duo, J., Zhenguo, C., Wang, L.
PDB entry 8i15: Crystal structure of AtHPPD-YH20335 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2023-01-12
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8i16: Crystal structure of the selenomethionine (SeMet)-derived Cas12g (D513A) mutant
Classification: RNA BINDING PROTEIN
Source organism: Lachnospiraceae bacterium ND2006
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2023-01-12
Authors: Zhang, B., Chen, J., Ye, Y.M., OuYang, S.Y.
PDB entry 8i17: Structural basis for H2A-H2B recognitions by human Spt16
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-01-12
Authors: Huang, H., Li, Y.
PDB entry 8i18: Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGTP at pH 7.7
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i19: Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGTP at pH 8.0
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1a: Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGTP at pH 8.6
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1b: A COMPARISON OF THE HIGH RESOLUTION STRUCTURES OF HUMAN AND MURINE INTERLEUKIN-1B
Classification: CYTOKINE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 1991-01-29
Authors: Ohlendorf, D.H., Weber, P.C., Salemme, F.R.
PDB entry 8i1c: Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGTP at pH 9.1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1d: Crystal structure of human MTH1(G2K mutant) in complex with 2-oxo-dATP at pH 7.7
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1e: Crystal structure of human MTH1(G2K mutant) in complex with 2-oxo-dATP at pH 8.0
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1f: Crystal structure of human MTH1(G2K mutant) in complex with 2-oxo-dATP at pH 8.6
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1g: Crystal structure of human MTH1(G2K mutant) in complex with 2-oxo-dATP at pH 9.1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1h: Crystal structure of human MTH1(G2K mutant) in complex with 2-oxo-dATP at pH 9.7
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1i: Crystal structure of human MTH1(G2K/D120N mutant) in complex with 2-oxo-dATP at pH 7.7
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1j: Crystal structure of human MTH1(G2K/D120N mutant) in complex with 2-oxo-dATP at pH 9.7
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2023-01-13
Authors: Nakamura, T., Yamagata, Y.
PDB entry 8i1m: Crystal structure of oxidated APSK1 domain from human PAPSS1 in complex with APS and ADP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.699 Å
Deposited: 2023-01-13
Authors: Zhang, L., Song, W.Y., Zhang, L.
PDB entry 8i1n: Crystal structure of APSK2 domain from human PAPSS2 in complex with endogenous APS and ADP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-01-13
Authors: Zhang, L., Song, W.Y., Zhang, L.
PDB entry 8i1o: Crystal structure of APSK2 domain from human PAPSS2 in complex with exogenous APS and ADP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-01-13
Authors: Zhang, L., Song, W.Y., Zhang, L.
PDB entry 8i1t: The asymmetric unit of P22 empty capsid
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-01-13
Authors: Xiao, H., Liu, H.R., Cheng, L.P.
PDB entry 8i1u: Human TRiC-PhLP2A complex in the closed state
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2023-01-13
Authors: Roh, S.H., Park, J., Kim, H., Lim, S.
PDB entry 8i1v: The asymmetric unit of P22 procapsid
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-01-13
Authors: Xiao, H., Liu, H.R., Cheng, L.P.
PDB entry 8i1w: The asymmetric structure of homodimeric E. coli TrpRS bound with tryptophanyl adenylate at one of its two active pockets
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-01-13
Authors: Xiang, M., Zhou, H.
PDB entry 8i1y: The structure of E. coli TrpRS bound with a chemical fragment
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2023-01-13
Authors: Xiang, M., Zhou, H.
PDB entry 8i1z: E. coli tryptophanyl-tRNA synthetase bound with a chemical fragment
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-01-13
Authors: Xiang, M., Zhou, H.
PDB entry 8i21: Cryo-EM structure of 6-subunit Smc5/6 arm region
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.02 Å
Deposited: 2023-01-13
Authors: Jun, Z., Qian, L., Xiang, Z., Tong, C., Zhaoning, W., Duo, J., Zhenguo, C., Lanfeng, W.
PDB entry 8i22: Acyl-ACP synthetase structure bound to pimelic acid monoethyl ester
Classification: CYTOSOLIC PROTEIN
Source organism: Vibrio harveyi
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.15 Å
Deposited: 2023-01-13
Authors: Huang, H., Wang, C., Chang, S., Cui, T., Xu, Y., Zhang, H., Zhou, C., Zhang, X., Feng, Y.
PDB entry 8i23: Clostridium thermocellum RNA polymerase transcription open complex with SigI1 and its promoter
Classification: TRANSCRIPTION/DNA
Source organism: Acetivibrio thermocellus DSM 1313; Acetivibrio thermocellus DSM1313; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2023-01-13
Authors: Li, J., Zhang, H., Li, D., Feng, Y., Zhu, P.
PDB entry 8i24: Clostridium thermocellum RNA polymerase transcription open complex with SigI6 and its promoter
Classification: TRANSCRIPTION
Source organism: Acetivibrio thermocellus DSM 1313; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-01-13
Authors: Li, J., Zhang, H., Li, D., Feng, Y., Zhu, P.
PDB entry 8i25: NMR structure of Toxoplasma gondii PDCD5 (trans form)
Classification: ENDOCYTOSIS
Source organism: Toxoplasma gondii GT1
Experimental method: SOLUTION NMR
Deposited: 2023-01-14
Authors: Lin, M.H., Hsu, C.H.
PDB entry 8i26: NMR structure of Toxoplasma gondii PDCD5 (cis form)
Classification: ENDOCYTOSIS
Source organism: Toxoplasma gondii GT1
Experimental method: SOLUTION NMR
Deposited: 2023-01-14
Authors: Lin, M.H., Hsu, C.H.
PDB entry 8i27: E. coli tryptophanyl-tRNA synthetase bound with a chemical fragment at the dimerization interface
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-01-14
Authors: Xiang, M., Zhou, H.
PDB entry 8i28: Structure of Phosphoserine Aminotransferase from Saccharomyces cerevisiae
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-01-14
Authors: Jang, J.Y., Chang, J.H.
PDB entry 8i29: Crystal structure of butanol dehydrogenase A (YqdH) in complex with NADH from Fusobacterium nucleatum
Classification: BIOSYNTHETIC PROTEIN
Source organism: Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2023-01-14
Authors: Bai, X., Lan, J., Bu, T.T., Wang, L.L., He, S.R., Zhang, J., Xu, Y.B.
PDB entry 8i2a: E. coli tryptophanyl-tRNA synthetase bound with a chemical fragment at the dimerization interface
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-01-14
Authors: Xiang, M., Zhou, H.
PDB entry 8i2b: Human SIRT6 in complex with inhibitor 7702
Classification: LYASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-01-14
Authors: Wang, Y.
PDB entry 8i2c: E. coli tryptophanyl-tRNA synthetase bound with a chemical fragment at the dimerization interface
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2023-01-14
Authors: Xiang, M., Zhou, H.
PDB entry 8i2d: Crystal structure of Bacillus subtilis LytE
Classification: ANTIMICROBIAL PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2023-01-14
Authors: Tandukar, S., Kwon, E., Kim, D.Y.
PDB entry 8i2e: Crystal structure of Bacillus subtilis LytE in complex with IseA
Classification: ANTIMICROBIAL PROTEIN/INHIBITOR
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-01-14
Authors: Tandukar, S., Kwon, E., Kim, D.Y.