LiteFold/PDB huggingface dataset:
PDB entry 7vta: Talaromyces verruculosus talaropentaene synthase apo
Classification: TRANSFERASE
Source organism: Talaromyces verruculosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-10-28
Authors: Hui, T., Mori, T., Abe, I.
PDB entry 7vtb: Partially closed conformation of talaropentaene synthase cyclase domain
Classification: TRANSFERASE
Source organism: Talaromyces verruculosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-10-28
Authors: Hui, T., Mori, T., Abe, I.
PDB entry 7vtc: Crystal structure of MERS main protease in complex with PF07321332
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53866 Å
Deposited: 2021-10-28
Authors: Lin, C., Zhong, F.L., Zhou, X.L., Zhang, J., Li, J.
PDB entry 7vtd: Unliganded structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15055 Å
Deposited: 2021-10-29
Authors: Kim, S.H., Rhee, S.
PDB entry 7vte: uridine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15297 Å
Deposited: 2021-10-29
Authors: Kim, S.H., Rhee, S.
PDB entry 7vtf: cytidine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.20203 Å
Deposited: 2021-10-29
Authors: Kim, S.H., Rhee, S.
PDB entry 7vtg: Pseudouridine bound structure of Pseudouridine kinase (PUKI) S30A mutant from Escherichia coli strain B
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89859 Å
Deposited: 2021-10-29
Authors: Kim, S.H., Rhee, S.
PDB entry 7vth: The crystal structure of SARS-CoV-2 3CL protease in complex with compound 1
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-10-29
Authors: Yamamoto, S., Tachibana, Y.
PDB entry 7vti: Crystal structure of the Cas13bt3-crRNA binary complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Planctomycetes bacterium; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2021-10-29
Authors: Nakagawa, R., Takeda, N.S., Tomita, A., Hirano, H., Kusakizako, T., Nishizawa, T., Yamashita, K., Nishimasu, H., Nureki, O.
PDB entry 7vtj: The cross-reaction complex structure with VQIIYK peptide and tau antibody's Fab domain.
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-10-29
Authors: Tsuchida, T., Fukuhara, N., Tsuchiya, T., Miyamoto, K., In, Y., Minoura, K., Taniguchi, Y., Ishida, T., Tomoo, K.
PDB entry 7vtk: Crystal structure of Glycoside Hydrolases family 64 beta-1,3-glucanase
Classification: HYDROLASE
Source organism: Streptomyces pratensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.90697 Å
Deposited: 2021-10-29
Authors: Jiang, Z.Q., Ma, J.W.
PDB entry 7vtl: Crystal structure of GH family 64 beta-1,3-glucanase complexed with Laminaritriose
Classification: HYDROLASE
Source organism: Streptomyces pratensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07038 Å
Deposited: 2021-10-29
Authors: Jiang, Z.Q., Ma, J.W.
PDB entry 7vtm: Crystal structure of Glucoside hydrolase family 64 beta-1,3-glucanase complexed with Laminaritetraose
Classification: HYDROLASE
Source organism: Streptomyces pratensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05153 Å
Deposited: 2021-10-29
Authors: Jiang, Z.Q., Ma, J.W.
PDB entry 7vtn: Cryo-EM structure of the Cas13bt3-crRNA-target RNA ternary complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Planctomycetes bacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2021-10-30
Authors: Nakagawa, R., Soumya, K., Han, A., Takeda, N.S., Tomita, A., Hirano, H., Kusakizako, T., Tomohiro, N., Yamashita, K., Feng, Z., Nishimasu, H., Nureki, O.
PDB entry 7vto: The crystal structure of PAK1 with the inhibitor GW8510
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2021-10-30
Authors: Zhu, S.J.
PDB entry 7vtp: Cryo-EM structure of PYD-deleted human NLRP3 hexamer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2021-10-30
Authors: Ohto, U., Shimizu, T.
PDB entry 7vtq: Cryo-EM structure of mouse NLRP3 (full-length) dodecamer
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2021-10-30
Authors: Ohto, U., Shimizu, T.
PDB entry 7vtr: 3-ketoacyl-CoA thiolase Tfu_0875
Classification: TRANSFERASE
Source organism: Thermobifida fusca (strain YX)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2021-10-30
Authors: Liu, L.X., Zhou, S.H., Deng, Y.
PDB entry 7vtv: Crystal structure of PDE8A catalytic domain in complex with 15
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-10-31
Authors: Wu, X.-N., Zhou, Q., Huang, Y.-D., Li, Z., Wu, Y., Luo, H.-B.
PDB entry 7vtw: Crystal structure of PDE8A catalytic domain in complex with 17
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79971 Å
Deposited: 2021-10-31
Authors: Wu, X.-N., Zhou, Q., Huang, Y.-D., Li, Z., Wu, Y., Luo, H.-B.
PDB entry 7vtx: Crystal structure of PDE8A catalytic domain in complex with 22
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.50011 Å
Deposited: 2021-10-31
Authors: Wu, X.-N., Zhou, Q., Huang, Y.-D., Li, Z., Wu, Y., Luo, H.-B.
PDB entry 7vty: de novo designed protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-10-31
Authors: Zhang, L.
PDB entry 7vtz: Chitoporin from Escherichia coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-11-01
Authors: Amornloetwattana, R., Soysa, H.S.M., Suginta, W., van den Berg, B.
PDB entry 7vu0: Chitoporin from Escherichia coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-11-01
Authors: Suginta, W., Soysa, H.S.M., Amornloetwattana, R., van den Berg, B.
PDB entry 7vu1: Chitoporin from Escherichia coli complex with chitohexaose
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-11-01
Authors: Suginta, W., Soysa, H.S.M., Amornloetwattana, R., van den Berg, B.
PDB entry 7vu2: Chitoporin from Serratia marcescens
Classification: MEMBRANE PROTEIN
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-11-01
Authors: Amornloetwattana, R., Robinson, R.C., van den Berg, B., Suginta, W.
PDB entry 7vu3: Chitoporin from Serratia marcescens in-complex with chitohexaose
Classification: MEMBRANE PROTEIN
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-11-01
Authors: Amornloetwattana, R., Robinson, R.C., van den Berg, B., Suginta, W.
PDB entry 7vu4: de novo design based on 1r26
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-01
Authors: Zhang, L.
PDB entry 7vu5: Structure of the transmembrane domain of the CD28 dimer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-11-01
Authors: Wu, H., Cao, R., Wen, M., Ouyang, B.
PDB entry 7vu6: The crystal structure of SARS-CoV-2 3CL protease in complex with compound 3
Classification: Viral protein/inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-01
Authors: Yamamoto, S., Yamane, J., Tachibana, Y.
PDB entry 7vu7: The Solution structure of the C-terminal domain from flagelliform spidroin
Classification: STRUCTURAL PROTEIN
Source organism: Araneus ventricosus
Experimental method: SOLUTION NMR
Deposited: 2021-11-01
Authors: Fan, J.S., Yang, D.
PDB entry 7vu8: L7-Tir domain with bound ligand
Classification: HYDROLASE
Source organism: Linum usitatissimum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-11-01
Authors: Tan, Y., Xu, C., Yu, D., Song, W., Wu, B., Schulze-Lefert, P., Chai, J.
PDB entry 7vu9: Pholiota squarrosa lectin (PhoSL) in complex with fucose(alpha1-6)[GlcNAc(beta1-4)]GlcNAc
Classification: SUGAR BINDING PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.154 Å
Deposited: 2021-11-01
Authors: Yamasaki, K., Yamasaki, T., Kubota, T.
PDB entry 7vua: Anaerobic hydroxyproline degradation involving C-N cleavage by a glycyl radical enzyme
Classification: LYASE
Source organism: Clostridiales bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.695 Å
Deposited: 2021-11-01
Authors: Duan, Y., Lu, Q., Yuchi, Z., Zhang, Y.
PDB entry 7vub: Phloem lectin (PP2) complex with Nitrobenzene
Classification: SUGAR BINDING PROTEIN
Source organism: Cucumis sativus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2021-11-02
Authors: Sivaji, N., Bobbili, K.B., Suguna, K., Surolia, A.
PDB entry 7vuc: Myoglobin mutant L29I/H64G/V68A
Classification: BIOSYNTHETIC PROTEIN
Source organism: Physeter macrocephalus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-11-02
Authors: Takahashi, K., Korendovych, I.V., Tame, J.R.H.
PDB entry 7vue: Structural insight of the molecular mechanism of cilofexor bound to FXR
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2021-11-02
Authors: Jiang, L., Chen, Y.C.
PDB entry 7vuf: Crystal Structure of the core region of Thermus thermophilus MutS2.
Classification: DNA BINDING PROTEIN
Source organism: Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2021-11-02
Authors: Fukui, K., Yano, T.
PDB entry 7vug: Cryo-EM structure of a class A orphan GPCR in complex with Gi
Classification: MEMBRANE PROTEIN
Source organism: Bacillus circulans; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-02
Authors: Liu, Z.J., Hua, T., Zhou, Y.L., Wu, L.J.
PDB entry 7vuh: Cryo-EM structure of a class A orphan GPCR
Classification: MEMBRANE PROTEIN
Source organism: Bacillus circulans; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2021-11-02
Authors: Liu, Z.J., Hua, T., Zhou, Y.L., Wu, L.J.
PDB entry 7vui: Cryo-EM structure of a class A orphan GPCR
Classification: MEMBRANE PROTEIN
Source organism: Bacillus circulans; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-02
Authors: Liu, Z.J., Hua, T., Zhou, Y.L., Wu, L.J.
PDB entry 7vuj: Cryo-EM structure of a class A orphan GPCR
Classification: MEMBRANE PROTEIN
Source organism: Bacillus circulans; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-11-02
Authors: Liu, Z.J., Hua, T., Zhou, Y.L., Wu, L.J.
PDB entry 7vuk: Crystal Structure of the core region of Thermus thermophilus MutS2 complexed with ADP.
Classification: DNA BINDING PROTEIN
Source organism: Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.38 Å
Deposited: 2021-11-02
Authors: Fukui, K., Yano, T.
PDB entry 7vul: Structure of Klebsiella Phage P560 depolymerase
Classification: LYASE
Source organism: Klebsiella phage P560
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2021-11-02
Authors: Li, M., Chen, R., Zhang, S., Zhang, W.
PDB entry 7vum: Crystal structure of SSB complexed with que
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.319 Å
Deposited: 2021-11-03
Authors: Lin, E.S., Huang, Y.H., Huang, C.Y.
PDB entry 7vun: Design, modification, evaluation and cocrystal studies of novel phthalimides regulating PD-1/PD-L1 interaction
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2021-11-03
Authors: Cheng, Y., Sun, C.L., Chen, M.R., Yang, P., Xiao, Y.B.
PDB entry 7vuo: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation F141L
Classification: SIGNALING PROTEIN/METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.679 Å
Deposited: 2021-11-03
Authors: Chen, L.
PDB entry 7vup: Structure of NF-kB p52 homodimer bound to +1/-1 swap P-Selectin kB DNA fragment
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2021-11-04
Authors: Meshcheryakov, V.A., Wang, V.Y.-F.
PDB entry 7vuq: Structure of NF-kB p52 homodimer bound to A/T-centric P-Selectin kB DNA fragment
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2021-11-04
Authors: Meshcheryakov, V.A., Wang, V.Y.-F.
PDB entry 7vur: Crystal structure of AlleyCat9 with calcium but no inhibitor
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-04
Authors: Margheritis, E., Takahashi, K., Korendovych, I.V., Tame, J.R.H.
PDB entry 7vus: Crystal structure of AlleyCat9 with 5-nitro-benzotriazole
Classification: BIOSYNTHETIC PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-04
Authors: Tame, J.R.H., Korendovych, I.V., Margheritis, E., Takahashi, K.
PDB entry 7vut: Crystal structure of AlleyCat10
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-04
Authors: Tame, J.R.H., Korendovych, I.V., Margheritis, E., Takahashi, K.
PDB entry 7vuu: Crystal structure of AlleyCat10 with inhibitor
Classification: BIOSYNTHETIC PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-11-04
Authors: Tame, J.R.H., Korendovych, I.V., Margheritis, E., Takahashi, K.
PDB entry 7vuw: Bovine heart cytochrome c oxidase in the cyanide-bound fully oxidized state at 50 K
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-11-04
Authors: Shimada, A., Tsukihara, T.
PDB entry 7vux: Complex structure of PD1 and 609A-Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2021-11-04
Authors: Huang, H., Zhu, Z., Zhao, J., Jiang, L., Yang, H., Deng, L., Meng, X., Ding, J., Yang, S., Zhao, L., Xu, W., Wang, X.
PDB entry 7vuy: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with PAMP-12. state1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2021-11-04
Authors: Li, Y., Yang, F.
PDB entry 7vuz: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with PAMP-12, state2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2021-11-04
Authors: Li, Y., Yang, F.
PDB entry 7vv0: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with PAMP-12, local
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-11-04
Authors: Li, Y., Yang, F.
PDB entry 7vv3: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with linear cortistatin-14
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2021-11-04
Authors: Li, Y., Yang, F.
PDB entry 7vv4: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with linear cortistatin-14, local
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2021-11-04
Authors: Li, Y., Yang, F.
PDB entry 7vv5: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with C48/80, state1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2021-11-04
Authors: Li, Y., Yang, F.
PDB entry 7vv6: Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with C48/80 (local)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-04
Authors: Li, Y., Yang, F.
PDB entry 7vv8: Crystal Structure of HRasQ61L(GMPPNP-bound) in complex with the Ras-binding domain(RBD) of SIN1
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-04
Authors: Zheng, Y.Y., Zhou, C.
PDB entry 7vv9: Crystal Structure of HRas(GMPPNP-bound) in complex with the Ras-binding domain(RBD) of SIN1
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-11-05
Authors: Zheng, Y.Y., Zhou, C.
PDB entry 7vva: Pseudouridine bound structure of Pseudouridine kinase (PUKI) from Escherichia coli strain B
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75029 Å
Deposited: 2021-11-05
Authors: Kim, S.H., Rhee, S.
PDB entry 7vvb: Crystal Structure of KRas4A(GMPPNP-bound) in complex with the Ras-binding domain(RBD) of SIN1
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-05
Authors: Zheng, Y.Y., Zhou, C.
PDB entry 7vvc: Crystal structure of inactive mutant of leaf-branch compost cutinase variant
Classification: HYDROLASE
Source organism: Unknown prokaryotic organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2021-11-05
Authors: Niu, D., Zeng, W., Huang, J.W., Chen, C.C., Liu, W.D., Guo, R.T.
PDB entry 7vvd: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation Q135P
Classification: SIGNALING PROTEIN/METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.134 Å
Deposited: 2021-11-05
Authors: Chen, L.
PDB entry 7vve: Complex structure of a leaf-branch compost cutinase variant in complex with mono(2-hydroxyethyl) terephthalic acid
Classification: HYDROLASE
Source organism: Unknown prokaryotic organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-11-05
Authors: Niu, D., Zeng, W., Huang, J.W., Chen, C.C., Liu, W.D., Guo, R.T.
PDB entry 7vvg: Crystal Structure of HRasG12V(GMPPNP-bound) in complex with the Ras-binding domain(RBD) of SIN1
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-06
Authors: Zheng, Y.Y., Zhou, C.
PDB entry 7vvh: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation E140G
Classification: SIGNALING PROTEIN/METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.296 Å
Deposited: 2021-11-06
Authors: Chen, L.
PDB entry 7vvi: OXA-58 crystal structure of acylated meropenem complex
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-11-06
Authors: Saino, H., Sugiyabu, T., Miyano, M.
PDB entry 7vvj: PTHrP-bound human PTH1R in complex with Gs
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-06
Authors: Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
PDB entry 7vvk: PTH-bound human PTH1R in complex with Gs (class1)
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-06
Authors: Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
PDB entry 7vvl: PTH-bound human PTH1R in complex with Gs (class2)
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-11-06
Authors: Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
PDB entry 7vvm: PTH-bound human PTH1R in complex with Gs (class3)
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-06
Authors: Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
PDB entry 7vvn: PTH-bound human PTH1R in complex with Gs (class4)
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-11-06
Authors: Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
PDB entry 7vvo: PTH-bound human PTH1R in complex with Gs (class5)
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; unidentified; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-11-06
Authors: Kobayashi, K., Kusakizako, T., Miyauchi, H., Tomita, A., Kobayashi, K., Shihoya, W., Yamashita, K., Nishizawa, T., Kato, H.E., Nureki, O.
PDB entry 7vvp: Crystal structure of SARS-Cov-2 main protease in complex with PF07304814
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2021-11-07
Authors: Zhou, X.L., Zhong, F.L., Lin, C., Zeng, P., Zhang, J., Li, J.
PDB entry 7vvr: Bovine cytochrome c oxidese in CN-bound mixed valence state at 50 K
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-11-08
Authors: Shimada, A., Tsukihara, T.
PDB entry 7vvs: PLL9 induced TmFtn nanocage
Classification: PROTEIN BINDING
Source organism: Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-11-08
Authors: Zhao, G., Zhang, X.
PDB entry 7vvt: SARS-CoV-2 3CL protease (3CLpro) in complex with a covalent inhibitor
Classification: VIRAL INHIBITOR/COMPLEX
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2021-11-08
Authors: Su, H., Nie, T., Li, M., Xu, Y.
PDB entry 7vvu: NuA4 HAT module bound to the nucleosome
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-11-09
Authors: Chen, Z., Qu, K.
PDB entry 7vvv: Crystal structure of MmtN
Classification: TRANSFERASE
Source organism: Roseovarius indicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-11-09
Authors: Peng, M., Li, C.Y.
PDB entry 7vvw: MmtN-SAM complex
Classification: TRANSFERASE
Source organism: Roseovarius indicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2021-11-09
Authors: Zhang, Y.Z., Peng, M., Li, C.Y.
PDB entry 7vvx: MmtN-SAH-Met complex
Classification: TRANSFERASE
Source organism: Roseovarius indicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2021-11-09
Authors: Zhang, Y.Z., Peng, M., Li, C.Y.
PDB entry 7vvy: TRA module of NuA4
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-09
Authors: Chen, Z., Qu, K.
PDB entry 7vvz: NuA4 bound to the nucleosome
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae S288C; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.8 Å
Deposited: 2021-11-09
Authors: Qu, K., Chen, Z.
PDB entry 7vw0: Structure of a dimeric periplasmic protein
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.447 Å
Deposited: 2021-11-09
Authors: Yang, J., Liu, L.
PDB entry 7vw1: Structure of a dimeric periplasmic protein bound with cuprous ions
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.494 Å
Deposited: 2021-11-09
Authors: Yang, J., Liu, L.
PDB entry 7vw2: Structure of a dimeric periplasmic protein bound with cupric ions
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.186 Å
Deposited: 2021-11-09
Authors: Yang, J., Liu, L.
PDB entry 7vw3: Cryo-EM structure of SaCas9-sgRNA-DNA ternary complex
Classification: DNA BINDING PROTEIN/RNA/DNA
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-11-09
Authors: Du, W.H., Qian, J.Q., Huang, Q.
PDB entry 7vw4: The X-ray structure of sperm whale F46C/L61C myoglobin double mutant
Classification: OXYGEN STORAGE
Source organism: Physeter macrocephalus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-09
Authors: Lin, Y.W.
PDB entry 7vw5: Crystal structures of alphavirus nonstructural protein 4 (nsP4) reveal an intrinsically dynamic RNA-dependent RNA polymerase fold
Classification: TRANSFERASE
Source organism: Sindbis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-11-09
Authors: Tan, Y.B., Luo, D.
PDB entry 7vw6: Cryo-EM Structure of Formate Dehydrogenase 1 from Methylorubrum extorquens AM1
Classification: OXIDOREDUCTASE
Source organism: Methylorubrum extorquens AM1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2021-11-09
Authors: Yoshikawa, T., Makino, F., Miyata, T., Suzuki, Y., Tanaka, H., Namba, K., Sowa, K., Kitazumi, Y., Shirai, O.
PDB entry 7vw7: Crystal structure of the 2 ADP-AlF4-bound V1 complex
Classification: MOTOR PROTEIN
Source organism: Enterococcus hirae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.818 Å
Deposited: 2021-11-09
Authors: Suzuki, K., Shekhar, M., Gupta, C., Singharoy, A., Murata, T.
PDB entry 7vw8: Helicoverpa armigera pheromone-binding protein PBP1 at pH 7.5
Classification: TRANSPORT PROTEIN
Source organism: Helicoverpa armigera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-11-09
Authors: Zheng, J., Chen, Z.
PDB entry 7vw9: Helicoverpa armigera pheromone-binding protein PBP1 at pH 5.5
Classification: TRANSPORT PROTEIN
Source organism: Helicoverpa armigera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-11-10
Authors: Zheng, J., Chen, Z.
PDB entry 7vwa: Helicoverpa armigera pheromone-binding protein PBP1 with Z-9-hexadecenal
Classification: TRANSPORT PROTEIN
Source organism: Helicoverpa armigera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-11-10
Authors: Zheng, J., Chen, Z.
PDB entry 7vwb: Phloem lectin (PP2) structure -complex with N-Acetyllactosamine (LacNAc)
Classification: SUGAR BINDING PROTEIN
Source organism: Cucumis sativus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-11-10
Authors: Sivaji, N., Bobbili, K.B., Suguna, K., Surolia, A.
PDB entry 7vwc: Cryo-EM structure of human very long-chain fatty acid ABC transporter ABCD1
Classification: TRANSPORT PROTEIN
Source organism: Caenorhabditis elegans; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2021-11-10
Authors: Chen, Z.P., Xu, D., Wang, L., Mao, Y.X., Yang, L., Cheng, M.T., Hou, W.T., Chen, Y.X., Zhou, C.Z.
PDB entry 7vwd: Crystal Structure of the Y53F/N55A mutant of LEH
Classification: HYDROLASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.153 Å
Deposited: 2021-11-10
Authors: Qu, G., Li, X., Sun, Z.T., Han, X., Liu, W.D.
PDB entry 7vwe: Human peroxisome proliferator-activated receptor (PPAR) delta ligand binding domain in complex with a synthetic partial agonist JK122
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-11-10
Authors: Oyama, T., Miyachi, H.
PDB entry 7vwf: Human peroxisome proliferator-activated receptor (PPAR) delta ligand binding domain in complex with a synthetic agonist TIPP204
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-11-10
Authors: Oyama, T., Miyachi, H.
PDB entry 7vwg: Human peroxisome proliferator-activated receptor (PPAR) delta ligand binding domain in complex with a synthetic alpha/delta dual agonist JKPL38
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-11-10
Authors: Oyama, T., Miyachi, H.
PDB entry 7vwh: human peroxisome proliferator-activated receptor (PPAR) delta ligand binding domain in complex with a synthetic agonist JKPL39
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-11-10
Authors: Oyama, T., Miyachi, H.
PDB entry 7vwj: Matrix arm of deactive state CI from rotenone-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-11-10
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vwk: The product template domain of AviM
Classification: ANTIBIOTIC
Source organism: Streptomyces viridochromogenes Tue57
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-11-10
Authors: Feng, Y., Yang, X., Zheng, J.
PDB entry 7vwl: Membrane arm of deactive state CI from rotenone-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-11-11
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vwm: Crystal Structure of the Y53F/N55A/I116V mutant of LEH
Classification: HYDROLASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-11-11
Authors: Qu, G., Li, X., Sun, Z.T., Han, X., Liu, W.D.
PDB entry 7vwn: The structure of an engineered PET hydrolase
Classification: HYDROLASE
Source organism: Ideonella sakaiensis (strain NBRC 110686 / TISTR 2288 / 201-F6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-11-11
Authors: Xie, W., Jia, Q.
PDB entry 7vwo: TA complex from Mycobacterium tuberculosis
Classification: TOXIN/ANTITOXIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-11-11
Authors: Eun, H.-J., Lee, B.-J., Lee, J.-Y.
PDB entry 7vwp: Structure of the flavin-dependent monooxygenase FlsO1 from the biosynthesis of fluostatinsin
Classification: OXIDOREDUCTASE
Source organism: Micromonospora rosaria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-11-11
Authors: Zhang, Y., Yang, C., Zhang, L., Zhang, C.
PDB entry 7vws: Carbazole Prenyl Transferase LvqB4
Classification: TRANSFERASE
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2021-11-11
Authors: Suemune, H., Nagata, R., Kuzuyama, T., Nagano, S.
PDB entry 7vwt: Carbazole Prenyl Transferase CqsB4
Classification: TRANSFERASE
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2021-11-11
Authors: Suemune, H., Nagata, R., Kuzuyama, T., Nagano, S.
PDB entry 7vwv: The crystal structure of African swine fever virus I73R
Classification: VIRAL PROTEIN
Source organism: African swine fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2021-11-11
Authors: Shen, Z., Liang, R.
PDB entry 7vww: X-ray structure of a domain-swapped poly-glutamine Monellin mutant
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-11-12
Authors: Manjula, R., Ramaswamy, S., Gosavi, S.
PDB entry 7vwx: CryoEM structure of football-shaped GroEL:ES2 with RuBisCO
Classification: CHAPERONE
Source organism: Escherichia coli K-12; Rhodospirillum rubrum ATCC 11170
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.6 Å
Deposited: 2021-11-12
Authors: Kim, H., Roh, S.H.
PDB entry 7vwy: Cryo-EM structure of Rob-dependent transcription activation complex in a unique conformation
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.57 Å
Deposited: 2021-11-12
Authors: Lin, W., Feng, Y.
PDB entry 7vwz: Cryo-EM structure of Rob-dependent transcription activation complex in a unique conformation
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-11-12
Authors: Lin, W., Feng, Y., Shi, J.
PDB entry 7vx0: The structure of GdmN complex with ATP
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-11-12
Authors: Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.
PDB entry 7vx1: SARS-CoV-2 Beta variant spike protein in open state
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vx2: Crystal Structure of the Y53F/N55A/I80F/L114V/I116V mutant of LEH
Classification: HYDROLASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.485 Å
Deposited: 2021-11-12
Authors: Qu, G., Li, X., Sun, Z.T., Han, X., Liu, W.D.
PDB entry 7vx3: OXA-58 crystal structure of acylated meropenem complex 2
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-11-12
Authors: Saino, H., Sugiyabu, T., Miyano, M.
PDB entry 7vx4: ACE2-RBD in SARS-CoV-2 Beta variant S-ACE2 complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vx5: ACE2-RBD in SARS-CoV-2 Kappa variant S-ACE2 complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vx6: OXA-58 crystal structure of acylated meropenem complex 2
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-11-12
Authors: Saino, H., Sugiyabu, T., Miyano, M.
PDB entry 7vx8: Cryo-EM structure of ATP-bound human very long-chain fatty acid ABC transporter ABCD1
Classification: TRANSPORT PROTEIN
Source organism: Caenorhabditis elegans; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-11-12
Authors: Chen, Z.P., Xu, D., Wang, L., Mao, Y.X., Yang, L., Cheng, M.T., Hou, W.T., Chen, Y.X., Zhou, C.Z.
PDB entry 7vx9: SARS-CoV-2 Kappa variant spike protein in complex wth ACE2, state C1
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxa: SARS-CoV-2 Kappa variant spike protein in complex with ACE2, state C2a
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxb: SARS-CoV-2 Kappa variant spike protein in C2b state
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxc: SARS-CoV-2 Kappa variant spike protein in C3 state
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxd: SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C1 state
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxe: SARS-CoV-2 Kappa variant spike protein in open state
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxf: SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C2B state
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxg: Non-receptor Protein Tyrosine Phosphatase SHP2 in Complex with Allosteric Inhibitor TK-453
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-11-12
Authors: Li, T.H., Guo, H.T., Ji, X.Y.
PDB entry 7vxh: Coxsackievirus B3 full particle at pH7.4 (VP3-234Q)
Classification: VIRUS
Source organism: Coxsackievirus B3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2021-11-12
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vxi: SARS-CoV-2 Kappa variant spike protein in transition state
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxk: SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C2A state
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxl: Coxsackievirus B3 A-particle at pH7.4 (VP3-234Q)
Classification: VIRUS
Source organism: Coxsackievirus B3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-12
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vxm: SARS-CoV-2 spike protein in complex with ACE2, Beta variant, C3 state
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-11-12
Authors: Xu, C., Cong, Y.
PDB entry 7vxn: Coxsackievirus B3 Empty particle at pH7.4 (VP3-234Q)
Classification: VIRUS
Source organism: Coxsackievirus B3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2021-11-12
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vxo: Structure of the C-terminal head domain of the Fowl Adenovirus serotype 4 (FAdV-4) fibre-2 protein
Classification: VIRAL PROTEIN
Source organism: Fowl aviadenovirus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-11-13
Authors: Song, Y.P., Zhao, Z.C., Liu, L., Li, X.S., Wei, Q.
PDB entry 7vxp: Matrix arm of active state CI from Q10 dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-11-13
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vxq: The Carbon Monoxide Complex of [NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77
Classification: OXIDOREDUCTASE
Source organism: Citrobacter sp. S-77
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2021-11-13
Authors: Nishikawa, K., Higuchi, K., Imanishi, T., Higuchi, Y.
PDB entry 7vxr: Crystal structure of BPSL1038 from Burkholderia pseudomallei
Classification: HYDROLASE
Source organism: Burkholderia pseudomallei K96243
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-11-13
Authors: Shaibullah, S., Mohd-Sharif, M., Ho, K.L., Firdaus-Raih, M., Nathan, S., Mohamed, R., Teh, A.K., Waterman, J., Ng, C.L.
PDB entry 7vxs: Membrane arm of active state CI from Q10 dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-13
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vxt: Crystal structure of a selenomethionine-labeled BPSL1038 from Burkholderia pseudomallei
Classification: HYDROLASE
Source organism: Burkholderia pseudomallei K96243
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2021-11-13
Authors: Shaibullah, S., Mohd-Sharif, M., Ho, K.L., Firdaus-Raih, M., Nathan, S., Mohamed, R., Teh, A.K., Waterman, J., Ng, C.L.
PDB entry 7vxu: Matrix arm of deactive state CI from Q10 dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-11-13
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vxv: Snapshots of Human PSMD10(Gankyrin) unfolding by urea: 0 hours incubation / Native
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2021-11-13
Authors: Mukund Sudharsan, M.G., Dalvi, S., Venkatraman, P.
PDB entry 7vxw: Snapshots of Human PSMD10(Gankyrin) unfolding by urea: 1 hour incubation
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2021-11-13
Authors: Mukund Sudharsan, M.G., Dalvi, S., Venkatraman, P.
PDB entry 7vxx: Zika virus NS2B/NS3 protease bZipro(C143S) in complex with 4-amino benzamidine
Classification: VIRAL PROTEIN
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-11-13
Authors: Xiong, Y.C., Cheng, F., Zhang, J.Y., Su, H.X., Hu, H.C., Zou, Y., Li, M.J., Xu, Y.C.
PDB entry 7vxy: Zika virus NS2B/NS3 protease bZipro(C143S) in complex with D-RKOR
Classification: VIRAL PROTEIN
Source organism: Zika virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2021-11-13
Authors: Xiong, Y.C., Cheng, F., Zhang, J.Y., Su, H.X., Hu, H.C., Zou, Y., Li, M.J., Xu, Y.C.
PDB entry 7vxz: Coxsackievirus B3 at pH7.4 (VP3-234Q) incubation with coxsackievirus and adenovirus receptor for 20min
Classification: VIRUS
Source organism: Coxsackievirus B3; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2021-11-13
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vy0: Coxsackievirus B3 full particle at pH7.4 (VP3-234N)
Classification: VIRUS
Source organism: Coxsackievirus B3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-11-13
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vy1: Membrane arm of deactive state CI from Q10 dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-11-13
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vy2: STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES DIMER
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides f. sp. denitrificans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2021-11-13
Authors: Tani, K., Kanno, R., Kawamura, S., Kikuchi, R., Nagashima, K.V.P., Hall, M., Takahashi, A., Yu, L.-J., Kimura, Y., Madigan, M.T., Mizoguchi, A., Humbel, B.M., Wang-Otomo, Z.-Y.
PDB entry 7vy3: STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES LACKING PROTEIN-U
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides f. sp. denitrificans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2021-11-13
Authors: Tani, K., Kanno, R., Kawamura, S., Kikuchi, R., Nagashima, K.V.P., Hall, M., Takahashi, A., Yu, L.-J., Kimura, Y., Madigan, M.T., Mizoguchi, A., Humbel, B.M., Wang-Otomo, Z.-Y.
PDB entry 7vy4: Snapshots of Human PSMD10(Gankyrin) unfolding by urea: 2 hours incubation
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2021-11-13
Authors: Mukund Sudharsan, M.G., Dalvi, S., Venkatraman, P.
PDB entry 7vy5: Coxsackievirus B3 (VP3-234Q) incubation with CD55 at pH7.4
Classification: VIRUS
Source organism: Coxsackievirus B3; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2021-11-13
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vy6: Coxsackievirus B3(VP3-234N) incubate with CD55 at pH7.4
Classification: VIRUS
Source organism: Coxsackievirus B3; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2021-11-13
Authors: Wang, Q.L., Liu, C.C.
PDB entry 7vy7: Snapshots of Human PSMD10(Gankyrin) unfolding by urea: 3 hours incubation
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2021-11-13
Authors: Mukund Sudharsan, M.G., Dalvi, S., Venkatraman, P.
PDB entry 7vy8: Matrix arm of active state CI from Q10-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-11-13
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vy9: Membrane arm of active state CI from Q10-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-13
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vya: Matrix arm of deactive state CI from Q10-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-11-13
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vye: Membrane arm of deactive state CI from Q10-NADH dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-11-14
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vyf: Matrix arm of active state CI from Rotenone dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-11-14
Authors: Gu, J.K., Yang, M.J.
PDB entry 7vyg: Membrane arm of active state CI from rotenone dataset
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-11-14
Authors: Gu, J.K., Yang, M.J.