LiteFold/PDB huggingface dataset:
PDB entry 9gh4: Fusobacterium nucleatum adhesin CbpF
Classification: CELL ADHESION
Source organism: Fusobacterium nucleatum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-08-15
Authors: Roderer, D., Marongiu, G.L., Fink, U.
PDB entry 9gh5: Complex of Fusobacterium nucleatum CbpF with human CEACAM1
Classification: CELL ADHESION
Source organism: Fusobacterium nucleatum; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-08-15
Authors: Marongiu, G.L., Fink, U., Roderer, D.
PDB entry 9gh6: CEACAM1 (35-234), focused refinement in the complex with CbpF
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-08-15
Authors: Marongiu, G.L., Fink, U., Roderer, D.
PDB entry 9gh7: Complex of human TfR1 with a potent bicyclic peptide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.079 Å
Deposited: 2024-08-15
Authors: Pellegrino, S., Pernigo, S., Swan, M.K., Bezerra, G.A., Chen, L.
PDB entry 9gh9: A novel aminotransferase from Streptomyces sp.
Classification: TRANSFERASE
Source organism: Streptomyces sp. BV333
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2024-08-15
Authors: De Rose, S.A., Isupov, M.N., Patti, S.
PDB entry 9gha: Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.24 Å
Deposited: 2024-08-15
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 9ghb: Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2024-08-15
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 9ghc: Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-08-15
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 9ghd: Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2024-08-15
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 9ghe: Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.87 Å
Deposited: 2024-08-15
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 9ghf: Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-08-15
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 9ghg: Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome (FusB-Sa70S:SSU)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Staphylococcus aureus; Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2024-08-15
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 9ghh: Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Staphylococcus aureus; Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-08-15
Authors: Gonzalez-Lopez, A., Selmer, M.
PDB entry 9ghi: Machupo virus GP1-GP2 heterodimer in complex with Fab of MAC1
Classification: VIRAL PROTEIN
Source organism: Mammarenavirus machupoense; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2024-08-15
Authors: Bowden, T.A., Paesen, G.C.
PDB entry 9ghj: Junin virus GP1-GP2 heterodimer in complex with Fab of JUN1
Classification: VIRAL PROTEIN
Source organism: Mammarenavirus juninense; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-08-15
Authors: Bowden, T.A., Paesen, G.C.
PDB entry 9ghk: Crystal structure of Fyn SH3 domain/tau 214-220 peptide complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2024-08-15
Authors: Becker, S.
PDB entry 9ghl: Fe(II)-2-oxoglutarate-dependent pseudomonal iron uptake factor C in complex with malate
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-08-15
Authors: Alshref, F.M., Allen, M.D., Sanguankiattichai, N., Zaborskyte, G., Schofield, C.J.
PDB entry 9ghn: Structure of SARS-CoV-2 Main Protease (Mpro) with mutation of Q256A
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-08-15
Authors: Creon, A., Scheer, T.E.S., Lane, T.J., Rahmani Mashhour, A., Guenther, S., Reinke, P.Y.A., Meents, A., Chapman, H.N.
PDB entry 9gho: Structure of SARS-CoV-2 Main Protease (Mpro) with mutation of S284A
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-08-15
Authors: Creon, A., Scheer, T.E.S., Lane, T.J., Rahmani Mashhour, A., Guenther, S., Reinke, P.Y.A., Meents, A., Chapman, H.N.
PDB entry 9ghr: Crystal Structure of EGFR-WT in Complex with Covalent Compound 10n
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-16
Authors: Niggenaber, J., Mueller, M.P., Rauh, D.
PDB entry 9ghs: Crystal Structure of EGFR-WT in Complex with Covalent Compound 10a
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-16
Authors: Niggenaber, J., Mueller, M.P., Rauh, D.
PDB entry 9ght: Crystal Structure of EGFR-WT in Complex with BI-4020
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-16
Authors: Niggenaber, J., Mueller, M.P., Rauh, D.
PDB entry 9ghu: Crystal Structure of EGFR-WT in Complex with Covalent Compound 10f
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-08-16
Authors: Niggenaber, J., Mueller, M.P., Rauh, D.
PDB entry 9ghv: Crystal Structure of EGFR-WT in Complex with Covalent Compound 13
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-08-16
Authors: Niggenaber, J., Mueller, M.P., Rauh, D.
PDB entry 9ghx: Lysozyme covalently bound to fac-[Re(CO)3-imidazole] complex, incubated for 112 weeks. Data collection done at mammalian body temperature.
Classification: ANTIMICROBIAL PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-08-16
Authors: Jacobs, F.J.F., Brink, A., Helliwell, J.R.
PDB entry 9ghy: Cyclophilin A in complex with Sanglifehrin A analogue (2R,3S,7S,10S,E)-10-(3-aminopropyl)-2,7-dimethylspiro[3,8,11-triaza-1(2,7)-quinolina-5(3,1)-pyridazinacyclopentadecaphanene-13,5'-[1,3]dioxan]-14-ene-4,6,9,12-tetraone
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2024-08-16
Authors: Meyners, C., Dreizler, J.K., Hausch, F.
PDB entry 9ghz: Cryo-EM structure of human SLC45A4 in lipid nanodiscs
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2024-08-16
Authors: Markusson, S., Newstead, S.
PDB entry 9gi0: Truncated MmpL4 in detergent
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli MC1061; Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-08-16
Authors: Earp, J.C., Garaeva, A.A., Seeger, M.A.
PDB entry 9gi1: Structure of the S.aureus MecA/ClpC/ClpP degradation system
Classification: CHAPERONE
Source organism: Escherichia coli; Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-08-16
Authors: Azinas, S., Wallden, K., Katikaridis, P., Schahl, A., Mogk, A., Carroni, M.
PDB entry 9gi2: Truncated MmpL4 in nanodiscs in absence of substrate
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli MC1061; Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-16
Authors: Earp, J.C., Garaeva, A.A., Seeger, M.A.
PDB entry 9gi3: Truncated MmpL4 in nanodiscs in the presence of desferrated mycobactin
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli MC1061; Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-08-16
Authors: Earp, J.C., Garaeva, A.A., Seeger, M.A.
PDB entry 9gi4: TFIIIC5 DNA binding domain
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2024-08-16
Authors: Leen, E., Bayliss, R.
PDB entry 9gi5: Fe(II)-2-oxoglutarate-dependent Oryza sativa dioxygenase HSL1 in complex with 2-oxoglutarate
Classification: OXIDOREDUCTASE
Source organism: Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-08-16
Authors: Dhingra, S., Alshref, F.M., Farcas, I., Allen, M.D., Brewitz, L., Schofield, C.J.
PDB entry 9gi6: Structure of SARS-CoV-2 Main Protease (Mpro) with mutation of N214A
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-08-17
Authors: Creon, A., Scheer, T.E.S., Lane, T.J., Rahmani Mashhour, A., Guenther, S., Reinke, P.Y.A., Meents, A., Chapman, H.N.
PDB entry 9gi7: Hen Egg-White Lysozyme (HEWL) complexed with a Lindqvist-type hexavanadate (V6-OH) polyoxometalate
Classification: PROTEIN BINDING
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-08-17
Authors: Moussawi, M.A., Parac-Vogt, T.N.
PDB entry 9gi8: Solution structure of homodimeric TMEM106B
Classification: MEMBRANE PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-08-17
Authors: Schweimer, K., Perez-Borrajero, C., Hennig, J.
PDB entry 9gi9: Wildtype EGFR bound with (R)-3-((3-chloro-2-methoxyphenyl)amino)-2-(3-((tetrahydrofuran-2-yl)methoxy)pyridin-4-yl)-1,5,6,7-tetrahydro-4H-pyrrolo[3,2-c]pyridin-4-one
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2024-08-18
Authors: Pagliarini, R.A., Henderson, J.A., Borrelli, D.R., Brooijmans, N., Hilbert, B.J., Huff, M.R., Ito, T., Kryukov, G.V., Ladd, B., Martin, B.R., Milgram, B.C., Motiwala, H., OHearn, E., Wang, W., Hata, A., Bellier, J., Kuzmic, P., Guzman-Perez, A., Jackson, E.L., Stuart, D.D.
PDB entry 9gia: Crystal Structure of Polyphosphate kinase 2-II (PPK2-II) from Bacillus cereus Apo-form
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-08-19
Authors: Saleem-Batcha, R., Keppler, M., Kuge, M., Andexer, J.N.
PDB entry 9gib: NMDA bound to compound 380
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.948 Å
Deposited: 2024-08-19
Authors: Carr, K.H., Ascic, E., Leonard, P.M.
PDB entry 9gic: NMDA bound to compound 345
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.823 Å
Deposited: 2024-08-19
Authors: Carr, K.H., Ascic, E., Leonard, P.M.
PDB entry 9gid: NMDA bound to compound 338
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-08-19
Authors: Carr, K.H., Ascic, E., Leonard, P.M.
PDB entry 9gie: NMDA bound to compound 315
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2024-08-19
Authors: Carr, K.H., Ascic, E., Leonard, P.M.
PDB entry 9gif: NMDA bound to compound 288
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-19
Authors: Carr, K.H., Ascic, E., Leonard, P.M.
PDB entry 9gig: NMDA bound to compound 387
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-08-19
Authors: Carr, K.H., Ascic, E., Leonard, P.M.
PDB entry 9gih: Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH14047
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.271 Å
Deposited: 2024-08-19
Authors: Scaletti Hutchinson, E., Stenmark, P.
PDB entry 9gii: Jumonji domain-containing protein 2A with crystallization epitope mutation R913A
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-08-19
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F., Structural Genomics Consortium (SGC)
PDB entry 9gij: Crystal structure of SARS-CoV-2 Mpro with compound 5
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.476 Å
Deposited: 2024-08-19
Authors: Prasad, A., Schmitt, A., Preuss, F., Maskos, K., Wang, X., Gotchev, D., Konz Makino, D.L.
PDB entry 9gik: Full-lenght Nedd4-2 E3 ubiquitin ligase
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2024-08-19
Authors: Kosek, D., Janosev, M., Obsil, T., Obsilova, V.
PDB entry 9gil: Crystal structure of SARS-CoV-2 Mpro with compound 12
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.849 Å
Deposited: 2024-08-19
Authors: Schmitt, A., Preuss, F., Prasad, A., Maskos, K., Wang, X., Gotchev, D., Konz Makino, D.L.
PDB entry 9gim: Full-lenght Nedd4-2 E3 ubiquitin ligase in presence of Ca2+
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.11 Å
Deposited: 2024-08-19
Authors: Kosek, D., Janosev, M., Obsil, T., Obsilova, V.
PDB entry 9gin: SOS2 in complex with compound 11
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-08-19
Authors: Zak, K.M., Kessler, D.
PDB entry 9gio: Crystal structure of the VHL-EloC-EloB complex with a covalent compound bound to C77 of VHL.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.486 Å
Deposited: 2024-08-19
Authors: Collie, G.W.
PDB entry 9gip: BFL1 covalently bound to inhibitor compound 7
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.463 Å
Deposited: 2024-08-19
Authors: Hargreaves, D., Cottee, M.A.
PDB entry 9giq: BFL1 covalently bound to inhibitor compound 13
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.421 Å
Deposited: 2024-08-19
Authors: Cottee, M.A.
PDB entry 9gir: BFL1 covalently bound to inhibitor compound 39
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.075 Å
Deposited: 2024-08-19
Authors: Cottee, M.A.
PDB entry 9gis: BFL1 covalently bound to inhibitor compound 17
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.387 Å
Deposited: 2024-08-19
Authors: Cottee, M.A.
PDB entry 9git: BFL1 covalently bound to inhibitor compound 43
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.145 Å
Deposited: 2024-08-19
Authors: Cottee, M.A.
PDB entry 9giu: Cryo-EM structure of human SLC45A4 in detergent
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-08-19
Authors: Markusson, S., Deme, J.C., Lea, S.M., Newstead, S.
PDB entry 9giv: Structure of the human mitochondrial pyruvate carrier inhibited by a UK5099-derivative
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-08-19
Authors: Sichrovsky, M., Lacabanne, D., Ruprecht, J.J., Rana, J.J., Stanik, K., Dionysopoulou, M., Sowton, A.P., King, M.S., Jones, S., Cooper, L., Hardwick, S.W., Paris, G., Chirgadze, D.Y., Ding, S., Fearnley, I.M.F., Palmer, S., Pardon, E., Steyaert, J., Leone, V., Forrest, L.R., Tavoulari, S., Kunji, E.R.S.
PDB entry 9giw: Structure of the human mitochondrial pyruvate carrier inhibited by zaprinast
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2024-08-19
Authors: Sichrovsky, M., Lacabanne, D., Ruprecht, J.J., Rana, J.J., Stanik, K., Dionysopoulou, M., Sowton, A.P., King, M.S., Jones, S., Cooper, L., Hardwick, S.W., Paris, G., Chirgadze, D.Y., Ding, S., Fearnley, I.M., Palmer, S., Pardon, E., Steyaert, J., Leone, V., Forrest, L.R., Tavoulari, S., Kunji, E.R.S.
PDB entry 9gix: Structure of the human mitochondrial pyruvate carrier in the apo-state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-08-19
Authors: Sichrovsky, M., Lacabanne, D., Ruprecht, J.J., Rana, J.J., Stanik, K., Dionysopoulou, M., Sowton, A.P., King, M.S., Jones, S., Cooper, L., Hardwick, S.W., Paris, G., Chirgadze, D.Y., Ding, S., Fearnley, I.M., Palmer, S., Pardon, E., Steyaert, J., Leone, V., Forrest, L.R., Tavoulari, S., Kunji, E.R.S.
PDB entry 9giy: Structure of the human mitochondrial pyruvate carrier inhibited by mitoglitazone
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2024-08-19
Authors: Sichrovsky, M., Lacabanne, D., Ruprecht, J.J., Rana, J.J., Stanik, K., Dionysopoulou, M., King, M.S., Sowton, A.P., Jones, S., Cooper, L., Hardwick, S.W., Paris, G., Chirgadze, D.Y., Ding, S., Fearnley, I.M., Palmer, S., Pardon, E., Steyaert, J., Leone, V., Forrest, L.R., Tavoulari, S., Kunji, E.R.S.
PDB entry 9giz: UMG-SP-1, a promiscuous hydrolase
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-08-20
Authors: Tokoli, A., Stojanovski, G., Jodaitis, L., Hollfelder, F., Hyvonen, M.
PDB entry 9gj0: Eugenol Oxidase (EUGO) from Rhodococcus jostii RHA1, mutant B1
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii RHA1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2024-08-20
Authors: Rozeboom, H.J., Fraaije, M.W.
PDB entry 9gj1: NMDA bound to compound 339
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2024-08-20
Authors: Carr, K.H., Ascic, E., Leonard, P.M.
PDB entry 9gj2: Crystal structure of human cathepsin S produced in insect cells in complex with ketoamide 13b
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2024-08-20
Authors: Falke, S., Karnicar, K., Usenik, A., Lindic, N., Sekirnik, A., Reinke, P.Y.A., Guenther, S., Turk, D., Meents, A.
PDB entry 9gj3: Structure of the amyloid-forming peptide LYIQNY
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-08-21
Authors: Durvanger, Z.
PDB entry 9gj4: Structure of the amyloid-forming peptide LYNleQNY
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-08-21
Authors: Durvanger, Z.
PDB entry 9gj5: Human 80S ribosome in complex with NatA in distal position and Ebp1
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.61 Å
Deposited: 2024-08-21
Authors: Klein, M.A., Wild, K., Sinning, I.
PDB entry 9gj6: Human 80S ribosome in complex with NatA in proximal and distal position
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.91 Å
Deposited: 2024-08-21
Authors: Klein, M.A., Wild, K., Sinning, I.
PDB entry 9gj8: Structure of Sticholisin II in large unilamellar vesicles.
Classification: MEMBRANE PROTEIN
Source organism: Stichodactyla helianthus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-08-21
Authors: Santiago, C., Martin-Benito, J., Arranz, R., Masiulis, S.
PDB entry 9gj9: Crystal structure of methionine gamma-lyase from Brevibacterium sandarakinum in complex with PLP and norleucine at pH 6.5
Classification: LYASE
Source organism: Brevibacterium sandarakinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.492 Å
Deposited: 2024-08-21
Authors: Kopecny, D., Ferchaud, N., Briozzo, P.
PDB entry 9gja: Entamoeba histolytica Gal/GalNAc lectin, mode 1
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjb: Entamoeba histolytica Gal/GalNAc lectin, mode 2
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjc: Entamoeba histolytica Gal/GalNAc lectin, mode 3
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjd: Entamoeba histolytica Gal/GalNAc lectin in presence of monoclonal antibody CP33-H/L-LA22, mode I
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gje: Entamoeba histolytica Gal/GalNAc lectin in presence of monoclonal antibody CP33-H/L-LA22, mode 2
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjf: Entamoeba histolytica Gal/GalNAc lectin in presence of monoclonal antibody CP33-H/L-LA22, mode 3
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjg: Entamoeba histolytica Gal/GalNAc lectin bound to monoclonal antibody CP33-H/L-LA22
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjh: Entamoeba histolytica Gal/GalNAc lectin bound to galactose, mode 1
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gji: Entamoeba histolytica Gal/GalNAc lectin bound to galactose, mode 2
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjj: Entamoeba histolytica Gal/GalNAc lectin bound to galactose, mode 3
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjk: Entamoeba histolytica Gal/GalNAc lectin bound to LacNAc, mode 1
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjl: Entamoeba histolytica Gal/GalNAc lectin bound to LacNAc, mode 2
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjm: Entamoeba histolytica Gal/GalNAc lectin bound to LacNAc, mode 3
Classification: CELL ADHESION
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-08-22
Authors: Gerard, S.F., Higgins, M.K.
PDB entry 9gjn: ERAP1 in complex with 1-[2-(3-oxo-3,4-dihydro-2H-1,4-benzothiazin-4-yl)acetamido]cyclohexane-1-carboxylic acid
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.717 Å
Deposited: 2024-08-22
Authors: Rowland, P.
PDB entry 9gjp: OCCM maturation intermediate stalled with an Arginine Finger mutation in Mcm5: Conformer 2
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-22
Authors: Butryn, A., Costa, A.
PDB entry 9gjq: Crystal structure of humanised cereblon from Magnetospirillum gryphiswaldense bound by dihydrouracil-indole compound [1-(1H-indol-6-yl)dihydro-2,4(1H,3H)-pyrimidinedione].
Classification: LIGASE
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.393 Å
Deposited: 2024-08-22
Authors: Collie, G.W.
PDB entry 9gjr: Crystal Structure of the Leishmania Bromodomain LmxBDF5.1 in complex with OXFBD06
Classification: TRANSCRIPTION
Source organism: Leishmania mexicana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-08-22
Authors: Amann, M., Huegle, M., Carter, J., Einsle, O., Guenther, S., Conway, S.
PDB entry 9gjs: ERAP1 in complex with 1-[2-(6-bromo-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-4-yl)acetamido]-4,4-difluorocyclohexane-1-carboxylic acid
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.351 Å
Deposited: 2024-08-22
Authors: Rowland, P.
PDB entry 9gjt: Structure of Nipah Virus RNA Polymerase Complex - Apo state
Classification: VIRAL PROTEIN
Source organism: Henipavirus nipahense
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-08-22
Authors: Sala, F., Ditter, K., Dybkov, O., Urlaub, H., Hillen, H.S.
PDB entry 9gju: Structure of replicating Nipah Virus RNA Polymerase Complex - RNA-bound state
Classification: VIRAL PROTEIN
Source organism: Henipavirus nipahense; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-08-22
Authors: Sala, F., Ditter, K., Dybkov, O., Urlaub, H., Hillen, H.S.
PDB entry 9gjv: Fab fragment of an antibody that recognises alpha-1 antitrypsin
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-08-22
Authors: Aldobiyan, I., Lomas, D.A., Irving, J.A.
PDB entry 9gjw: OCCM maturation intermediate stalled with an Arginine Finger mutation in Mcm2
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-22
Authors: Butryn, A., Costa, A.
PDB entry 9gjx: Bacillus licheniformis nitroreductase
Classification: OXIDOREDUCTASE
Source organism: Bacillus licheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-08-23
Authors: Crennell, S.J., Danson, M.J., Emptage, C.
PDB entry 9gjy: Bacillus licheniformis nitroreductase
Classification: OXIDOREDUCTASE
Source organism: Bacillus licheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2024-08-23
Authors: Crennell, S.J., Danson, M.J., Emptage, C.
PDB entry 9gjz: Ntaya methyltransferase (MTase) bound to AT-9010 (2'-methyl-2'-fluoro GTP)
Classification: VIRAL PROTEIN
Source organism: Ntaya virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2024-08-23
Authors: Boura, E., Krejcova, K.
PDB entry 9gk0: Human SMUG1 in complex with uracil
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2024-08-23
Authors: Ludaescher, J.M., Scaletti Hutchinson, E., Stenmark, P.
PDB entry 9gk1: SSX structure of human cytochrome P450 3A4 at room temperature
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2024-08-23
Authors: Glerup, J., Branden, G., Uwangue, O.
PDB entry 9gk2: Surface-layer (S-layer) PS2 protein from Corynebacterium glutamicum
Classification: STRUCTURAL PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-08-23
Authors: Sogues, A., Remaut, H., Sleutel, M.
PDB entry 9gk6: ERAP1 in complex with 1-[2-(6-chloro-3-oxo-3,4-dihydro-2H-1,4-benzothiazin-4-yl)acetamido]cyclohexane-1-carboxylic acid
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.327 Å
Deposited: 2024-08-23
Authors: Convery, M., Rowland, P.
PDB entry 9gkb: TRPC5 in complex with spin-labelled ligand SpinPico1
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2024-08-23
Authors: Porav, S.A., Bon, R.S.
PDB entry 9gke: ERAP1 in complex with 1-[2-(2-oxo-5-phenyl-2,3-dihydro-1,3-benzothiazol-3-yl)acetamido]cyclohexane-1-carboxylic acid
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.367 Å
Deposited: 2024-08-23
Authors: Chung, C.
PDB entry 9gkf: Amyloid Fibril of Heterogeneous nuclear ribonucleoprotein A1A induced by RNA binding
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-08-23
Authors: Frey, L., Riek, R.P., Arosio, P., Morelli, C.
PDB entry 9gkg: Crystal structure of UNC119 in complex with Squarunkin A
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2024-08-24
Authors: Yelland, T., Ismail, S.
PDB entry 9gkh: KvPepIH62A mutant,F420-dependent oxidoreductase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-08-24
Authors: Mueller, R., Zhao, H., Sikandar, A.
PDB entry 9gki: Structure of 5mer pore intermediate of Sticholysin II (StnII) toxin in lipid nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Stichodactyla helianthus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-08-25
Authors: Martin Benito, J., Santiago, C., Carlero, D.
PDB entry 9gkk: BetP heterotrimeric complex
Classification: TRANSPORT PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-08-25
Authors: Urbansky, K., Fu, L., Madej, M.G., Ziegler, C.
PDB entry 9gkl: Structure of the octameric pore of Fragaceotxin C (FraC or DELTA-actitoxin-Afr1a) in large unilamellar vesicles.
Classification: MEMBRANE PROTEIN
Source organism: Actinia fragacea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-08-25
Authors: Martin Benito, J., Santiago, C., Carlero, D., Arranz, R.
PDB entry 9gkm: Structure of HECT E3 TRIP12 forming K29/K48-branched Ubiquitin chains
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2024-08-25
Authors: Maiwald, S.A., Schulman, B.A.
PDB entry 9gkn: Structure of HECT E3 TRIP12 forming K29-linked Ubiquitin chains
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-25
Authors: Maiwald, S.A., Schulman, B.A.
PDB entry 9gko: Structure of 6mer pore intermediate of Sticholysin II (StnII) toxin in lipid nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Stichodactyla helianthus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2024-08-25
Authors: Martin Benito, J., Santiago, C., Carlero, D., Arranz, R.
PDB entry 9gkp: Structure of fragacetoxin C in lipid nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Actinia fragacea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-08-25
Authors: Martin Benito, J., Santiago, C.
PDB entry 9gkq: Cryo-EM structure of Botulinum neurotoxin serotype A
Classification: TOXIN
Source organism: Clostridium botulinum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-08-26
Authors: Zerang, Z., Liu, Z., He, J., Wang, X., Qi, F., Lei, D., Zhi, D., Wang, D.
PDB entry 9gkr: Crystal structure of artificial enzyme LmrR_pAF variant RMH in crystal form 1
Classification: DNA BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-08-26
Authors: Thunnissen, A.M.W.H., Leveson-Gower, R.B., Rozeboom, H.J., Roelfes, G.
PDB entry 9gks: Crystal structure of artificial enzyme LmrR_pAF variant RMH in crystal form 2
Classification: DNA BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2024-08-26
Authors: Thunnissen, A.M.W.H., Leveson-Gower, R.B., Rozeboom, H.J., Roelfes, G.
PDB entry 9gkt: Crystal structure of artificial enzyme LmrR_pAF variant RGN
Classification: DNA BINDING PROTEIN
Source organism: Lactococcus cremoris subsp. cremoris MG1363
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-08-26
Authors: Thunnissen, A.M.W.H., Leveson-Gower, R.B., Rozeboom, H.J., Roelfes, G.
PDB entry 9gku: Crystal Structure of Propanil hydrolase (PrpH) from Sphingomonas sp. Y57
Classification: HYDROLASE
Source organism: Sphingomonas sp. Y57
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2024-08-26
Authors: Graf, L.G., Lammers, L., Palm, G.J., Schulze, S.
PDB entry 9gkv: Crystal Structure of Deacetylase (HdaH) from Vibrio cholerae in complex with SAHA
Classification: HYDROLASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-26
Authors: Graf, L.G., Schulze, S., Lammers, M., Palm, G.J.
PDB entry 9gkw: Crystal Structure of Dimethoate hydrolase (DmhA) of Rhizorhabdus wittichii in complex with octanoic acid
Classification: HYDROLASE
Source organism: Rhizorhabdus wittichii DC-6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-26
Authors: Graf, L.G., Schulze, S., Palm, G.J., Lammers, M.
PDB entry 9gkx: Crystal Structure of Rhizorhabdus wittichii Dimethoate hydrolase (DmhA) in complex with SAHA
Classification: HYDROLASE
Source organism: Rhizorhabdus wittichii DC-6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-08-26
Authors: Graf, L.G., Lammers, M., Schulze, S., Palm, G.J.
PDB entry 9gky: Crystal Structure of Histone deacetylase (HdaH) from Vibrio cholerae in complex with decanoic acid
Classification: HYDROLASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2024-08-26
Authors: Graf, L.G., Schulze, S., Palm, G.J., Lammers, M.
PDB entry 9gkz: Crystal Structure of Acetylpolyamine amidohydrolase (ApaH) from Pseudomonas sp. M30-35
Classification: HYDROLASE
Source organism: Pseudomonas sp. M30-35
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2024-08-26
Authors: Graf, L.G., Schulze, S., Palm, G.J., Lammers, M.
PDB entry 9gl0: Crystal Structure of Acetylpolyamine aminohydrolase (ApaH) from Legionella pneumophila
Classification: HYDROLASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-08-26
Authors: Graf, L.G., Schulze, S., Palm, G.J., Lammers, M.
PDB entry 9gl1: Crystal Structure of Acetylpolyamine aminohydrolase (ApaH) from Legionella cherrii
Classification: HYDROLASE
Source organism: Legionella cherrii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-08-26
Authors: Graf, L.G., Schulze, S., Palm, G.J., Lammers, M.
PDB entry 9gl2: Befiradol-bound serotonin 5-HT1A receptor - Gs Protein Complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-08-26
Authors: Schneider, J., Gmeiner, P., Boettcher, B., Rasmussen, T.
PDB entry 9gl3: Cryo-EM structure of IrtAB 2xEQ, A256R_IrtB mutant in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-08-26
Authors: Gonda, I., Seeger, M.A.
PDB entry 9gl5: X-ray structure of the Thermus thermophilus Q190E mutant of the PilF-GSPIIB domain in the c-di-GMP bound state
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-27
Authors: Neissner, K., Woehnert, J.
PDB entry 9gl6: TRPC5 in complex with spin-labelled ligand SpinPico3
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-08-27
Authors: Porav, S.A., Bon, R.S., Hammond, K.L.R.
PDB entry 9gl7: EGFR Exon20 insertion mutant NPG bound with (S)-3-((3-chloro-2-methoxyphenyl)amino)-2-(3-((tetrahydrofuran-2-yl)methoxy)pyridin-4-yl)-1,5,6,7-tetrahydro-4H-pyrrolo[3,2-c]pyridin-4-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.878 Å
Deposited: 2024-08-27
Authors: Hilbert, B.J., Brooijmans, N., Milgram, B.C., Pagliarini, R.A.
PDB entry 9gl8: EGFR Exon20 insertion mutant NPG bound with STX-721
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.632 Å
Deposited: 2024-08-27
Authors: Hilbert, B.J., Brooijmans, N., Milgram, B.C., Pagliarini, R.A.
PDB entry 9gl9: Wild-type EGFR bound with STX-721
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.147 Å
Deposited: 2024-08-27
Authors: Hilbert, B.J., Brooijmans, N., Milgram, B.C., Pagliarini, R.A.
PDB entry 9gla: Crystal structure of a CDK2-based CDK7 mimic with inhibitor SY5609
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2024-08-27
Authors: Skerlova, J., Krejcirikova, V., Rezacova, P.
PDB entry 9glb: Crystal Structure of Deacetylase (HdaH) from Klebsiella pneumoniae subsp. ozaenae
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae subsp. ozaenae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-27
Authors: Qin, C., Graf, L.G., Schulze, S., Palm, G.J., Lammers, M.
PDB entry 9glc: NONO/SFPQ filament: local refinement central units (strand 1)
Classification: NUCLEAR PROTEIN
Source organism: Cricetulus griseus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-27
Authors: Rasmussen, T., Bottcher, B.
PDB entry 9gld: NONO/SFPQ filament: local refinement central units (strand 2)
Classification: NUCLEAR PROTEIN
Source organism: Cricetulus griseus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-27
Authors: Rasmussen, T., Bottcher, B.
PDB entry 9gle: Jumonji domain-containing protein 2A with crystallization epitope mutations A91T:T93S
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-08-27
Authors: Fairhead, M., Strain-Damerell, C., Ye, M., Mackinnon, S.R., Pinkas, D., MacLean, E.M., Koekemoer, L., Damerell, D., Krojer, T., Arrowsmith, C.H., Edwards, A., Bountra, C., Yue, W., Burgess-Brown, N., Marsden, B., von Delft, F., Structural Genomics Consortium (SGC)
PDB entry 9glf: Anthraquinone Pigment Production Regulated by Cinnamic Acid
Classification: LYASE
Source organism: Photorhabdus luminescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-08-27
Authors: Su, L., Schmalhofer, M., Grammbitter, G.L.C., Paczia, N., Glatter, T., Groll, M., Bode, H.B.
PDB entry 9glg: X-ray structure of the Thermus thermophilus Q218E mutant of the PilF-GSPIIB domain in the c-di-GMP bound state
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-08-27
Authors: Neissner, K., Woehnert, J.
PDB entry 9glh: Crystal Structure of UFC1 T106S
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.115 Å
Deposited: 2024-08-27
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9gli: Crystal Structure of UFC1 T106C
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.426 Å
Deposited: 2024-08-27
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9glj: Crystal Structure of UFC1 T106A
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.213 Å
Deposited: 2024-08-27
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9glk: Crystal Structure of UFC1 E149I
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2024-08-27
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9gll: Crystal Structure of UFC1 T106L
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-08-27
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9glm: Crystal Structure of UFC1 W145F
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-08-27
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9gln: Crystal Structure of UFC1 C116E
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2024-08-27
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9glo: Crystal Structure of UFC1 C116E&T106S
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2024-08-27
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9glp: Crystal Structure of UFC1 C116E&T106I
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-08-27
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9glq: Crystal structure of p73 tetramerisation domain in complex with darpins 1800
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-27
Authors: Chaikuad, A., Strubel, A., Doetsch, V., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 9glr: Crystal Structure of Human UBC9 C93E
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-08-28
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9gls: Crystal Structure of Human UBCH5B C85E
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-08-28
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9glt: Crystal Structure of Yeast Ubc13 C87E
Classification: LIGASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-08-28
Authors: Kumar, M., Banerjee, S., Wiener, R.
PDB entry 9glu: Crystal structure of KRasG12D-GDP in complex with the peptide MPB1
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-28
Authors: Ostermann, N., Zink, F.
PDB entry 9glv: Crystal structure of SARS-CoV-2 Mpro with AB-343.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-08-28
Authors: Prasad, A., Blaesse, M., Maskos, K., Steinbacher, S., Konz Makino, D.L.
PDB entry 9glw: NRas-Q61R-GTP in complex with the peptide MPB2
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-28
Authors: Ostermann, N., Zink, F.
PDB entry 9glx: NRas-Q61R-GTP in complex with the peptide MPB3
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-08-28
Authors: Ostermann, N., Zink, F.
PDB entry 9gly: Structure of an ancestral laccase from Agaricales fungi
Classification: OXIDOREDUCTASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-08-28
Authors: Medrano, F.J.
PDB entry 9glz: KRas-G12D-GMPPnP in complex with the nanobody KM12-AM
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-28
Authors: Ostermann, N., Zink, F.
PDB entry 9gm0: KvPepI F420-dependent oxidoreductase, F420 complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-08-28
Authors: Mueller, R., Zhao, H., Sikandar, A.
PDB entry 9gm2: Human SMUG1 in complex with DNA
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-28
Authors: Ludaescher, J.M., Scaletti Hutchinson, E., Stenmark, P.
PDB entry 9gm3: Crystal structure of the complex formed between the radical SAM protein ChlB and the leader region of its precursor substrate ChlA
Classification: OXIDOREDUCTASE
Source organism: Fischerella
Experimental method: X-RAY DIFFRACTION
Resolution: 1.653 Å
Deposited: 2024-08-28
Authors: de la Mora, E., Ruel, J., Usclat, A., Martin, L., Amara, P., Morinaka, B., Nicolet, Y.
PDB entry 9gm4: Crystal structure of elastase LasB from Pseudomonas aeruginosa PA14 in complex with 6558
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PA14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2024-08-28
Authors: Kolling, D., Koehnke, J.
PDB entry 9gm5: OCCM maturation intermediate stalled with an Arginine Finger mutation in Mcm5: Conformer 1
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-08-28
Authors: Butryn, A., Costa, A.
PDB entry 9gm6: MukBEF in a nucleotide-bound state with open neck gate (heads core)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli; Photorhabdus thracensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-08-28
Authors: Burmann, F., Lowe, J.