LiteFold/PDB huggingface dataset:
PDB entry 8qqy: Crystal structure of human Ephrin type-A receptor 2 (EPHA2) Kinase domain in complex with JG165
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-06
Authors: Zhubi, R., Gerninghaus, J., Knapp, S., Kraemer, A., Structural Genomics Consortium (SGC)
PDB entry 8qqz: Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form at pH 8.0
Classification: MEMBRANE PROTEIN
Source organism: Erythrobacter
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2023-10-06
Authors: Kovalev, K., Podoliak, E., Lamm, G.H.U., Marin, E., Stetsenko, A., Guskov, A.
PDB entry 8qr0: Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form at pH 4.3
Classification: MEMBRANE PROTEIN
Source organism: Erythrobacter
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-10-06
Authors: Kovalev, K., Podoliak, E., Lamm, G.H.U., Marin, E., Stetsenko, A., Guskov, A.
PDB entry 8qr1: Cryo-EM structure of the human Tip60 complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-10-06
Authors: Li, C., Smirnova, E., Schnitzler, C., Crucifix, C., Concordet, J.P., Brion, A., Poterszman, A., Schultz, P., Papai, G., Ben-Shem, A.
PDB entry 8qr2: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qr3: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qr4: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qr5: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qr6: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qr7: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qr8: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qr9: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qra: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qrb: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qrc: Crystal structure of ERK2 in complex with a covalently bound macrocyclic ligand
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-10-06
Authors: Gelin, M., Labesse, G.
PDB entry 8qrd: OleP in complex with testosterone in high salt crystallization conditions
Classification: OXIDOREDUCTASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-10-06
Authors: Fata, F., Costanzo, A., Freda, I., Gugole, E., Bulfaro, G., Barbizzi, L., Di Renzo, M., Savino, C., Vallone, B., Montemiglio, L.C.
PDB entry 8qre: Cholera holotoxin (wildtype)
Classification: TOXIN
Source organism: Vibrio cholerae O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-10-06
Authors: Mojica, N., Cordara, G., Krengel, U.
PDB entry 8qrf: SARS-CoV-2 delta RBD complexed with XBB-6 and beta-49 Fabs
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2023-10-06
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 8qrg: SARS-CoV-2 delta RBD complexed with XBB-2 Fab and NbC1
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-10-07
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 8qrh: Inactivated tick-borne encephalitis virus (TBEV) vaccine strain Sofjin-Chumakov
Classification: VIRAL PROTEIN
Source organism: Orthoflavivirus encephalitidis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-10-07
Authors: Moiseenko, A.V., Zhang, Y., Vorovitch, M., Ivanova, A., Liu, Z., Osolodkin, D.I., Egorov, A., Ishmukhametov, A., Sokolova, O.S.
PDB entry 8qri: TRRAP and EP400 in the human Tip60 complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-09
Authors: Li, C., Smirnova, E., Schnitzler, C., Crucifix, C., Concordet, J.P., Brion, A., Poterszman, A., SChultz, P., Papai, G., Ben-Shem, A.
PDB entry 8qrj: LCC-ICCG PETase mutant H218Y
Classification: HYDROLASE
Source organism: unidentified prokaryotic organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-10-09
Authors: Orr, G., Niv, Y., Barakat, M., Boginya, A., Dessau, M., Afriat-Jurnou, L.
PDB entry 8qrk: mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 1
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.69 Å
Deposited: 2023-10-09
Authors: Valentin Gese, G., Cipullo, M., Rorbach, J., Hallberg, B.M.
PDB entry 8qrl: mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 2
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2023-10-09
Authors: Valentin Gese, G., Cipullo, M., Rorbach, J., Hallberg, B.M.
PDB entry 8qrm: mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 3
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-10-09
Authors: Valentin Gese, G., Cipullo, M., Rorbach, J., Hallberg, B.M.
PDB entry 8qrn: mt-SSU in GTPBP8 knock-out cells, state 4
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-10-09
Authors: Valentin Gese, G., Cipullo, M., Rorbach, J., Hallberg, B.M.
PDB entry 8qro: ASCT2 trimer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-10-09
Authors: Borowska, A., Rheinberger, J., Paulino, C., Slotboom, D.J.
PDB entry 8qrp: ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS.1)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-10-09
Authors: Borowska, A., Rheinberger, J., Paulino, C., Slotboom, D.J.
PDB entry 8qrq: ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS.2)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2023-10-09
Authors: Borowska, A., Rheinberger, J., Paulino, C., Slotboom, D.J.
PDB entry 8qrr: ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the outward-facing state (OFS.3)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2023-10-09
Authors: Borowska, A., Rheinberger, J., Paulino, C., Slotboom, D.J.
PDB entry 8qrs: ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the intermediate outward-facing state (iOFS-up)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-10-09
Authors: Borowska, A., Rheinberger, J., Paulino, C., Slotboom, D.J.
PDB entry 8qrt: Acyl-ACP thioesterase from Lemna paucicostata in complex with a spirolactam
Classification: HYDROLASE
Source organism: Lemna aequinoctialis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-09
Authors: Freigang, J.
PDB entry 8qru: ASCT2 protomer in lipid nanodiscs with bound glutamine and Na+ ions in the intermediate outward-facing state (iOFS-down)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-09
Authors: Borowska, A., Rheinberger, J., Paulino, C., Slotboom, D.J.
PDB entry 8qrv: ASCT2 protomer in lipid nanodiscs under low Na+ concentration in the outward-facing state (OFS)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-09
Authors: Borowska, A., Rheinberger, J., Paulino, C., Slotboom, D.J.
PDB entry 8qrw: ASCT2 protomer in lipid nanodiscs under low Na+ concentration in the intermediate outward-facing state (iOFS-up)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-09
Authors: Borowska, A., Rheinberger, J., Paulino, C., Slotboom, D.J.
PDB entry 8qrx: Solution NMR structure of the peptidyl carrier domain TomAPCP from the Tomaymycin non-ribosomal peptide synthetase in its substrate-loaded state
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces regensis
Experimental method: SOLUTION NMR
Deposited: 2023-10-09
Authors: Karanth, M.N., Kirkpatrick, J.P., Carlomagno, T.
PDB entry 8qry: Crystal structure of the yeast spindle body component Spc98
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-10-09
Authors: Bellini, D., Yatskevich, S., Barford, D.
PDB entry 8qrz: Microbacterium testaceum C-glucosyl deglycosidase (CGD), wild type
Classification: LYASE
Source organism: Microbacterium testaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-09
Authors: Furlanetto, V., Kalyani, D.C., Divne, C.
PDB entry 8qs0: Acyl-ACP thioesterase from Lemna paucicostata in complex with a spirolactam
Classification: HYDROLASE
Source organism: Lemna aequinoctialis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-10-10
Authors: Freigang, J.
PDB entry 8qs2: Ternary structure of 14-3-3s, C-RAF phosphopeptide (pS259) and compound 29 (1076409)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qs3: Ternary structure of 14-3-3s, C-RAF phosphopeptide (pS259) and compound 23 (1083848)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qs4: Ternary structure of 14-3-3s, C-RAF phosphopeptide (pS259) and compound 22 (1083853)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qs5: Ternary structure of 14-3-3s, C-RAF phosphopeptide (pS259) and compound 21 (1075354)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qs6: Ternary structure of 14-3-3s, C-RAF phosphopeptide (pS259) and compound 21 (1075354)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qs7: Ternary structure of 14-3-3s, C-RAF phosphopeptide (pS259) and compound 70 (1084352)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qs8: Ternary structure of 14-3-3s, C-RAF phosphopeptide (pS259) and compound 78 (1084378)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qs9: Ternary structure of 14-3-3s, C-RAF phosphopeptide (pS259) and compound 83 (1084383)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qsa: Ternary structure of 14-3-3s, C-RAF phosphopeptide (pS259) and compound 86 (1084384)
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qsb: Ternary structure of 14-3-3s, ARAF phosphopeptide (pS214) and compound 86 (1124384).
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qsc: Ternary structure of 14-3-3s, ARAF phosphopeptide (pS214) and compound 22 (1083853).
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qsd: Ternary structure of 14-3-3s, BRAF phosphopeptide (pS365) and compound 79 (1124379).
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qse: Ternary structure of 14-3-3s, BRAF phosphopeptide (pS365) and compound 23 (1083848).
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qsf: Ternary structure of 14-3-3s, BRAF phosphopeptide (pS365) and compound 22 (1083853).
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qsg: Ternary structure of 14-3-3s, BRAF phosphopeptide (pS365) and compound 86 (1124384).
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qsh: Ternary structure of 14-3-3s, ARAF phosphopeptide (pS214) and compound 23 (1083848).
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-10
Authors: Konstantinidou, M., Vickery, H., Pennings, M.A.M., Virta, J., Visser, E.J., Oetelaar, M.C.M., Overmans, M., Neitz, J., Ottmann, C., Brunsveld, L., Arkin, M.R.
PDB entry 8qsi: Portal protein of empty Haloferax tailed virus 1.
Classification: VIRUS
Source organism: Haloferax tailed virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2023-10-10
Authors: Zhang, D., Daum, B., Isupov, M.N., McLaren, M.
PDB entry 8qsj: Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-10
Authors: Ritter, C., Nguyen, T.G., Kummer, E.
PDB entry 8qsk: Cryo-EM structure of human SLC15A4 dimer in outward open state in MSP1D1 nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-10
Authors: Rehan, S., Matsuoka, R., Jazayeri, A., Duerr, K.L.
PDB entry 8qsl: Cryo-EM structure of human SLC15A4 dimer in outward open state in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2023-10-10
Authors: Rehan, S., Matsuoka, R., Jazayeri, A., Duerr, K.L.
PDB entry 8qsm: Cryo-EM structure of human SLC15A4 monomer in outward open state in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2023-10-10
Authors: Rehan, S., Matsuoka, R., Jazayeri, A., Duerr, K.L.
PDB entry 8qsn: Cryo-EM structure of human SLC15A4 monomer in outward open state in PMAL C8
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2023-10-10
Authors: Rehan, S., Matsuoka, R., Jazayeri, A., Duerr, K.L.
PDB entry 8qso: Crystal structure of human Mcl-1 in complex with compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.106 Å
Deposited: 2023-10-10
Authors: Hekking, K.F.W., Gremmen, S., Maroto, S., Keefe, A.D., Zhang, Y.
PDB entry 8qsp: MUC5AC D3 assembly. SNP rs36189285: Arg996Gln.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2023-10-11
Authors: Trillo-Muyo, S., Hansson, G.C.
PDB entry 8qsq: Locally refined SARS-CoV-2 BA-2.86 Spike receptor binding domain (RBD) complexed with angiotensin converting enzyme 2 (ACE2)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-10-11
Authors: Ren, J., Stuart, D.I., Duyvesteyn, H.M.E.
PDB entry 8qsr: Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2023-10-11
Authors: Roth, P., Fotiadis, D., Jeckelmann, J.-M.
PDB entry 8qst: Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in the inward- and outward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2023-10-11
Authors: Roth, P., Fotiadis, D., Jeckelmann, J.-M.
PDB entry 8qsu: Crystal structure of SPOUT1/CENP-32 bound to SAH
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2023-10-11
Authors: Jeyaprakash, A.A., Abad, M.A.
PDB entry 8qsv: Crystal structure of SPOUT1/CENP-32 bound to SAM
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2023-10-11
Authors: Jeyaprakash, A.A., Abad, M.A.
PDB entry 8qsw: Crystal structure of SPOUT1/CENP-32 | A356N catalytic site mutant
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-10-11
Authors: Jeyaprakash, A.A., Abad, M.A.
PDB entry 8qsx: Solution NMR structure of the novel adaptor domain TomBN91 from the Tomaymycin non-ribosomal peptide synthetase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces regensis
Experimental method: SOLUTION NMR
Deposited: 2023-10-11
Authors: Karanth, M.N., Kirkpatrick, J.P., Carlomagno, T.
PDB entry 8qsy: Portal capsid interface of full Haloferax tailed virus 1.
Classification: VIRUS
Source organism: Haloferax tailed virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2023-10-11
Authors: Zhang, D., Daum, B., Isupov, M.N., McLaren, M.
PDB entry 8qsz: Structure of s. pombe RNA polymerase II in complex with DSIF and Rat1/Rai1
Classification: RNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2023-10-12
Authors: Carrique, L., Kus, K., Vasiljeva, L., Grimes, J.M.
PDB entry 8qt0: Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-3
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-10-12
Authors: Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.
PDB entry 8qt1: Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-5
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-10-12
Authors: Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.
PDB entry 8qt2: Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-6
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-10-12
Authors: Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.
PDB entry 8qt3: Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-5 and NAD+
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-10-12
Authors: Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.
PDB entry 8qt4: Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-6 and NAD+
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-10-12
Authors: Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.
PDB entry 8qt5: Crystal structure of Arabidopsis thaliana 14-3-3 isoform lambda in complex with a phosphopeptide from the transcription factor BZR1.
Classification: PEPTIDE BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2023-10-12
Authors: Hothorn, M., Obergfell, E.
PDB entry 8qt6: Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase
Classification: MEMBRANE PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2023-10-12
Authors: Dubach, V.R.A., San Segundo-Acosta, P., Murphy, B.J.
PDB entry 8qt7: Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase in complex with NADPH
Classification: MEMBRANE PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-10-12
Authors: Dubach, V.R.A., San Segundo-Acosta, P., Murphy, B.J.
PDB entry 8qt8: Crystal structure of human Sirt2 in complex with a TNFa-Myr analogue TNFn-34
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-10-12
Authors: Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.
PDB entry 8qt9: Cryo-EM structure of stably reduced Streptococcus pneumoniae NADPH oxidase in complex with NADH
Classification: MEMBRANE PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.36 Å
Deposited: 2023-10-12
Authors: Dubach, V.R.A., San Segundo-Acosta, P., Murphy, B.J.
PDB entry 8qta: Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase F397A mutant in complex with NADPH
Classification: MEMBRANE PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-10-12
Authors: Dubach, V.R.A., San Segundo-Acosta, P., Murphy, B.J.
PDB entry 8qtb: MUC5AC D'D3CysD1 domains. SNP rs36189285: Arg996Gln.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-10-12
Authors: Trillo-Muyo, S., Hansson, G.C.
PDB entry 8qtc: Crystal structure of Arabidopsis thaliana 14-3-3 omega in complex with a phosphopeptide from the transcription factor BZR1.
Classification: PEPTIDE BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-10-12
Authors: Hothorn, M., Obergfell, E.
PDB entry 8qtd: Local refinement of SARS-CoV-2 BA.2.86 Spike and XBB-7 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-10-12
Authors: Ren, J., Duyvesteyn, H.M.E., Stuart, D.I.
PDB entry 8qtf: Crystal structure of a C-terminally truncated version of Arabidopsis thaliana 14-3-3 omega in complex with a phosphopeptide from the transcription factor BZR1.
Classification: PROTEIN BINDING
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-10-12
Authors: Hothorn, M., Obergfell, E.
PDB entry 8qtg: Crystal structure of CBL-b in complex with an allosteric inhibitor (compound 9)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.419 Å
Deposited: 2023-10-12
Authors: Schimpl, M.
PDB entry 8qth: Crystal structure of CBL-b in complex with an allosteric inhibitor (compound 8)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2023-10-12
Authors: Schimpl, M.
PDB entry 8qti: Mycobacterium smegnatis RNAP open promoter complex with SigmaA and RbpA
Classification: TRANSCRIPTION
Source organism: Mycolicibacterium smegmatis MC2 155; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2023-10-12
Authors: Koval, T., Krasny, L., Dohnalek, J., Kouba, T.
PDB entry 8qtj: Crystal structure of Cbl-b in complex with an allosteric inhibitor (compound 30)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.523 Å
Deposited: 2023-10-12
Authors: Schimpl, M.
PDB entry 8qtk: Crystal structure of CBL-b in complex with an allosteric inhibitor (compound 31)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.873 Å
Deposited: 2023-10-12
Authors: Schimpl, M.
PDB entry 8qtl: Aplysia californica acetylcholine-binding protein in complex with Spiroimine (-)-4 S
Classification: CHOLINE-BINDING PROTEIN
Source organism: Aplysia californica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-10-12
Authors: Sulzenbacher, G., Bourne, Y., Marchot, P.
PDB entry 8qtm: Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 G678S mutant with bound malate
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09203 Å
Deposited: 2023-10-12
Authors: Loris, R., Haesaerts, S., Larsen, P.B.
PDB entry 8qtn: Cryo-EM structure of the apo yeast Ceramide Synthase
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-10-12
Authors: Schaefer, J., Clausmeyer, L., Koerner, C., Moeller, A., Froehlich, F.
PDB entry 8qto: CRYSTAL STRUCTURE OF HOLO-L28H-FNR OF A. FISCHERI
Classification: TRANSCRIPTION
Source organism: Aliivibrio fischeri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-10-13
Authors: Volbeda, A., Fontecilla-Camps, J.C.
PDB entry 8qtq: Thermostable WW domain
Classification: STRUCTURAL PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2023-10-13
Authors: Kovermann, M., Thomas, F.
PDB entry 8qtr: Cryo-EM structure of the FB-bound yeast Ceramide Synthase
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-10-13
Authors: Schaefer, J., Clausmeyer, L., Koerner, C., Moeller, A., Froehlich, F.
PDB entry 8qtt: Crystal structure of a C-terminally truncated version of Arabidopsis thaliana 14-3-3 omega in complex with a phosphopeptide from the inhibitor protein BKI1.
Classification: PROTEIN BINDING
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-10-13
Authors: Hothorn, M., Obergfell, E.
PDB entry 8qtu: Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-3 and NAD+
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-13
Authors: Friedrich, F., Kalbas, D., Meleshin, M., Einsle, O., Schutkowski, M., Jung, M.
PDB entry 8qtv: MUC5AC D'D3CysD1 domains.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-10-13
Authors: Trillo-Muyo, S., Hansson, G.C.
PDB entry 8qtw: Structure of human butyrylcholinesterase with (3-(((2-cycloheptylethyl)(methyl)amino)methyl)-1H-indol-7-yl)(methyl)carbamoylated Ser198
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2023-10-13
Authors: Brazzolotto, X., Meden, A., Knez, D., Gobec, S., Nachon, F.
PDB entry 8qtx: Structure of human butyrylcholinesterase with 3-(((2-cycloheptylethyl)(methyl)amino)methyl)-N-methyl-1H-indol-7-amine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2023-10-13
Authors: Brazzolotto, X., Meden, A., Knez, D., Gobec, S., Nachon, F.
PDB entry 8qty: LytR LCP domain from Streptococcus dysgalactiae subs. dysgalactiae
Classification: TRANSFERASE
Source organism: Streptococcus dysgalactiae subsp. dysgalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-10-13
Authors: Paquete-Ferreira, J., Romao, M.J., Santos-Silva, T.
PDB entry 8qtz: Cryo-EM reconstruction of VP5*/VP8* assembly from SA11 Rotavirus Tripsinized Triple Layered Particle
Classification: VIRUS
Source organism: Rotavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.27 Å
Deposited: 2023-10-13
Authors: Asensio-Cob, D., Perez-Mata, C., Gomez-Blanco, J., Vargas, J., Rodriguez, J.M., Luque, D.
PDB entry 8qu1: mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 1
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2023-10-13
Authors: Valentin Gese, G., Cipullo, M., Rorbach, J., Hallberg, B.M.
PDB entry 8qu2: NF-YB/C Heterodimer in Complex with a 16-mer NF-YA-derived Peptide Stabilized with C8-Hydrocarbon Linker
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-10-13
Authors: Durukan, C., Arbore, F., Klintrot, C.I.R., Grossmann, T.N., Hennig, S.
PDB entry 8qu3: NF-YB/C Heterodimer in Complex with a 13-mer NF-YA-derived Peptide Stabilized with C8-Hydrocarbon Linker
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2023-10-13
Authors: Arbore, F., Durukan, C., Klintrot, C.I.R., Grossmann, T.N., Hennig, S.
PDB entry 8qu4: NF-YB/C Heterodimer in Complex with a 13-mer NF-YA-derived Peptide Stabilized with C8-Hydrocarbon Linker in an alternative binding pose
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2023-10-13
Authors: Arbore, F., Durukan, C., Klintrot, C.I.R., Grossmann, T.N., Hennig, S.
PDB entry 8qu5: mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 2
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2023-10-13
Authors: Valentin Gese, G., Cipullo, M., Rorbach, J., Hallberg, B.M.
PDB entry 8qu6: Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD and an upstream-fork promoter fragment
Classification: TRANSCRIPTION
Source organism: Mycolicibacterium smegmatis MC2 155; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2023-10-13
Authors: Koval, T., Krasny, L., Dohnalek, J., Kouba, T.
PDB entry 8qu7: Crystal structure of the Plasmodium falciparum Apical membrane antigen (AMA1) in complex with single domain i-body WD34
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-10-14
Authors: Maddumage, J.C., Kvansakul, M.
PDB entry 8qu8: PROTAC-mediated complex of KRAS with VHL/Elongin-B/Elongin-C/Cullin-2/Rbx1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-10-14
Authors: Fischer, G., Peter, D., Arce-Solano, S.
PDB entry 8qu9: Structure of the NCOA4 (Nuclear Receptor Coactivator 4)-FTH1 (H-Ferritin) complex
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2023-10-15
Authors: Hoelzgen, F., Klukin, E., Zalk, R., Shahar, A., Cohen-Schwartz, S., Frank, G.A.
PDB entry 8qua: GTP binding protein YsxC from Staphylococcus aureus
Classification: PROTEIN BINDING
Source organism: Staphylococcus aureus subsp. aureus N315
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-15
Authors: Biktimirov, A., Islamov, D., Lazarenko, V., Fatkhullin, B., Validov, S., Yusupov, M., Usachev, K.
PDB entry 8qub: Hexameric HIV-1 CA in complex with DDD00074110
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-10-16
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8quc: Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-10-16
Authors: Chi, G., Mckinley, G., Marsden, B., Pike, A.C.W., Ye, M., Brooke, L.M., Bakshi, S., Pilati, N., Marasco, A., Gunthorpe, M., Alvaro, G., Large, C., Lakshminaraya, B., Williams, E., Sauer, D.B.
PDB entry 8qud: Cryo-EM Structure of Human Kv3.1 in Complex with Modulator AUT5
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-10-16
Authors: Chi, G., Mckinley, G., Marsden, B., Pike, A.C.W., Ye, M., Brooke, L.M., Bakshi, S., Lakshminarayana, B., Pilati, N., Marasco, A., Gunthorpe, M., Alvaro, G.S., Large, C.H., Williams, E., Sauer, D.B.
PDB entry 8que: Structure of the Bacteriophage PhiKZ non-virion RNA Polymerase bound to DNA and RNA
Classification: RNA BINDING PROTEIN
Source organism: Pseudomonas phage phiKZ; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-10-16
Authors: de Martin Garrido, N., Yakunina, M., Aylett, C.H.S.
PDB entry 8quf: carbonic anhydrase XII mimic in complex with 2-(3-((N-(4-sulfamoylbenzyl)pyridine-3-sulfonamido)methyl)phenoxy)acetic acid
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.141 Å
Deposited: 2023-10-16
Authors: Angeli, A., Ferraroni, M.
PDB entry 8qug: KRAS-G12C in Complex with Compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-10-16
Authors: Fischer, G., Kratochvil, B.
PDB entry 8quh: Hexameric HIV-1 CA in complex with DDD00057456
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-10-16
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8qui: Hexameric HIV-1 CA in complex with DDD00024969
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-10-16
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8quj: Hexameric HIV-1 CA in complex with DDD00100452
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-10-16
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8quk: Hexameric HIV-1 CA in complex with DDD00100439
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2023-10-16
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8qul: Hexameric HIV-1 CA in complex with DDD00100555
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2023-10-16
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8qun: human carbonic anhydrase I in complex with 2-((5-cyano-4-hydroxy-6-(p-tolyl)pyrimidin-2-yl)thio)-N-(4-sulfamoylphenyl)acetamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.606 Å
Deposited: 2023-10-16
Authors: Angeli, A., Ferraroni, M.
PDB entry 8quo: Cryo-EM structure of coproheme decarboxylase from Corynebacterium diphtheriae in complex with heme b
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium diphtheriae
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.94 Å
Deposited: 2023-10-16
Authors: Patil, G., Guo, Y., Borek, D., Hofbauer, S.
PDB entry 8qup: G-CSFR inhibitor Bop1
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-10-16
Authors: Ullrich, T., ElGamacy, M., Hartmann, M.D.
PDB entry 8quq: Crystal structure of Ompk36 GD at 3500 eV based on spherical harmonics absorption corrections
Classification: MEMBRANE PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2023-10-16
Authors: Duman, R., Wagner, A., Beis, K., Wong, J.
PDB entry 8qur: Crystal structure of Ompk36 GD at 3500 eV with no absorption corrections
Classification: MEMBRANE PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2023-10-16
Authors: Duman, R., Wagner, A., Beis, K., Wong, J.
PDB entry 8qus: Crystal structure of the Plasmodium vivax Apical membrane antigen (AMA1) in complex with single domain i-body WD34
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Plasmodium vivax Sal-1
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-10-17
Authors: Maddumage, J.C., Kvansakul, M.
PDB entry 8qut: Cryo-EM structure of the heat-irreversible amyloid fibrils of human lysozyme
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-10-17
Authors: Frey, L., Greenwald, J., Riek, R.
PDB entry 8quu: Crystal structure of chlorite dismutase at 3000 eV based on spherical harmonics absorption corrections
Classification: OXIDOREDUCTASE
Source organism: Cyanothece sp. PCC 7425
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-10-17
Authors: Duman, R., Wagner, A., Kamps, J., Orville, A.
PDB entry 8quv: Crystal structure of chlorite dismutase at 3000 eV with no absorption corrections
Classification: OXIDOREDUCTASE
Source organism: Cyanothece sp. PCC 7425
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-10-17
Authors: Duman, R., Wagner, A., Kamps, J., Orville, A.
PDB entry 8quw: Hexameric HIV-1 CA in complex with DDD01044153
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2023-10-17
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8qux: Hexameric HIV-1 CA in complex with DDD00100333
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-10-17
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8quy: Hexameric HIV-1 CA in complex with DDD01728501
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-10-17
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8quz: Crystal structure of chlorite dismutase at 3000 eV based on analytical absorption corrections
Classification: OXIDOREDUCTASE
Source organism: Cyanothece sp. PCC 7425
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-10-17
Authors: Duman, R., Wagner, A., Kamps, J., Orville, A.
PDB entry 8qv0: Structure of the native microtubule lattice nucleated from the yeast spindle pole body
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.6 Å
Deposited: 2023-10-17
Authors: Dendooven, T., Yatskevich, S., Burt, A., Bellini, D., Kilmartin, J., Barford, D.
PDB entry 8qv1: Hexameric HIV-1 CA in complex with DDD01728505
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-10-17
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8qv2: Structure of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.2 Å
Deposited: 2023-10-17
Authors: Dendooven, T., Yatskevich, S., Burt, A., Bellini, D., Kilmartin, J., Barford, D.
PDB entry 8qv3: Structure of the y-Tubulin Small Complex (yTuSC) as part of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.2 Å
Deposited: 2023-10-17
Authors: Dendooven, T., Yatskevich, S., Burt, A., Bellini, D., Kilmartin, J., Barford, D.
PDB entry 8qv4: Hexameric HIV-1 CA in complex with DDD01728503
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-10-17
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8qv5: Structure of human SPNS2 in LMNG
Classification: LIPID TRANSPORT
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2023-10-17
Authors: Li, H.Z., Pike, A.C.W., McKinley, G., Mukhopadhyay, S.M.M., Moreau, C., Scacioc, A., Abrusci, P., Borkowska, O., Chalk, R., Stefanic, S., Burgess-Brown, N., Duerr, K.L., Sauer, D.B.
PDB entry 8qv6: Structure of human SPNS2 in DDM
Classification: LIPID TRANSPORT
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2023-10-17
Authors: Li, H.Z., Pike, A.C.W., McKinley, G., Mukhopadhyay, S.M.M., Moreau, C., Scacioc, A., Abrusci, P., Borkowska, O., Chalk, R., Stefanic, S., Burgess-Brown, N., Duerr, K.L., Sauer, D.B.
PDB entry 8qv7: Crystal structure of human TDO with alpha-methyl-L-tryptophan
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.928 Å
Deposited: 2023-10-17
Authors: Wicki, M., Mac Sweeney, A.
PDB entry 8qv8: Cryo-EM structure of the heat-irreversible amyloid fibrils of hen egg-white lysozyme
Classification: PROTEIN FIBRIL
Source organism: Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-10-17
Authors: Frey, L., Greenwald, J., Riek, R.
PDB entry 8qv9: Hexameric HIV-1 CA in complex with DDD01829021
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-10-17
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8qva: Hexameric HIV-1 CA in complex with DDD01829894
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-10-17
Authors: Petit, A.P., Fyfe, P.K.
PDB entry 8qvb: Crystal structure of chlorite dismutase at 3000 eV based on a combination of spherical harmonics and analytical absorption corrections
Classification: OXIDOREDUCTASE
Source organism: Cyanothece sp. PCC 7425
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-10-17
Authors: Duman, R., Wagner, A., Kamps, J., Orville, A.
PDB entry 8qvc: Deinococcus aerius TR0125 C-glucosyl deglycosidase (CGD), wild type crystal cryoprotected with glycerol
Classification: LYASE
Source organism: Deinococcus aerius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-10-17
Authors: Furlanetto, V., Kalyani, D.C., Kostelac, A., Haltrich, D., Hallberg, B.M., Divne, C.