LiteFold/PDB huggingface dataset:
PDB entry 7tg3: [T:Ag+/Hg2+:T--(pH8.5-pH11; 300s)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 for 300s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.59 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tg4: [T:Ag+/Hg2+:T--(pH11-pH7; 5s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 with Ag+ and Hg2+ for 5s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 5.21 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tg5: Crystal Structure of the Pirin Family Protein Redox-sensitive Bicupin YhaK in the Presence of Fe Ion from Yersinia pestis
Classification: METAL BINDING PROTEIN
Source organism: Yersinia pestis CO92
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2022-01-07
Authors: Kim, Y., Chhor, G., Endres, M., Babnigg, G., Schneewind, O., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7tg6: [T:Ag+/Hg2+:T--(pH11-pH7; 30s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 with Ag+ and Hg2+ for 30s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.82 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tg7: [T:Ag+/Hg2+:T--(pH11-pH7; 60s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 with Ag+ and Hg2+ for 60s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.94 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tg8: [T:Ag+/Hg2+:T--(pH11-pH7; 90s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 with Ag+ and Hg2+ for 90s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 5.46 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tg9: [T:Ag+/Hg2+:T--(pH11-pH7; 300s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 11 and soaked in pH 7 with Ag+ and Hg2+ for 300s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.69 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tga: [T:Ag+/Hg2+:T--(pH8.5-pH11; 30s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 with Ag+ and Hg2+ for 30s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 6.61 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tgb: [T:Ag+/Hg2+:T--(pH8.5-pH11; 60s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 with Ag+ and Hg2+ for 60s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 5.36 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tgc: [T:Ag+/Hg2+:T--(pH8.5-pH11; 90s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 with Ag+ and Hg2+ for 90s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 5.19 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tgd: [T:Ag+/Hg2+:T--(pH8.5-pH11; 300s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 with Ag+ and Hg2+ for 300s
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 5.25 Å
Deposited: 2022-01-07
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7tge: SARS-CoV-2 Omicron 1-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2022-01-07
Authors: Stalls, V., Acharya, P.
PDB entry 7tgf: Single-domain VHH intrabodies neutralize ricin toxin.
Classification: IMMUNE SYSTEM/TOXIN
Source organism: Ricinus communis; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.347 Å
Deposited: 2022-01-07
Authors: Rudolph, M.J., Mantis, N.
PDB entry 7tgg: Cryo-EM structure of PilA-N and PilA-C from Geobacter sulfurreducens
Classification: PROTEIN FIBRIL
Source organism: Geobacter sulfurreducens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-01-07
Authors: Wang, F., Mustafa, K., Chan, C.H., Joshi, K., Bond, D.R., Hochbaum, A.I., Egelman, E.H.
PDB entry 7tgh: Cryo-EM structure of respiratory super-complex CI+III2 from Tetrahymena thermophila
Classification: MEMBRANE PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-01-07
Authors: Zhou, L., Maldonado, M., Padavannil, A., Guo, F., Letts, J.A.
PDB entry 7tgi: Single-domain VHH intrabodies neutralize ricin toxin
Classification: IMMUNE SYSTEM/TOXIN
Source organism: Ricinus communis; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2022-01-07
Authors: Rudolph, M.J.
PDB entry 7tgj: Crystal structure of DesD, the desferrioxamine synthetase from the Streptomyces griseoflavus ferrimycin biosynthetic pathway
Classification: LIGASE
Source organism: Streptomyces griseoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-01-07
Authors: Patel, K.D., Gulick, A.M.
PDB entry 7tgk: Crystal structure of ATP bound DesD, the desferrioxamine synthetase from the Streptomyces griseoflavus ferrimycin biosynthetic pathway
Classification: LIGASE
Source organism: Streptomyces griseoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-01-07
Authors: Patel, K.D., Gulick, A.M.
PDB entry 7tgl: Crystal structure of AMP+PPi bound DesD, the desferrioxamine synthetase from the Streptomyces griseoflavus ferrimycin biosynthetic pathway
Classification: LIGASE
Source organism: Streptomyces griseoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2022-01-07
Authors: Patel, K.D., Gulick, A.M.
PDB entry 7tgm: Crystal structure of HSC-AMS bound DesD, the desferrioxamine synthetase from the Streptomyces griseoflavus ferrimycin biosynthetic pathway
Classification: LIGASE/INHIBITOR
Source organism: Streptomyces griseoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-01-07
Authors: Patel, K.D., Gulick, A.M.
PDB entry 7tgn: Crystal structure of DesD, the desferrioxamine synthetase from the Streptomyces violaceus salmycin biosynthetic pathway
Classification: LIGASE
Source organism: Streptomyces violaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-01-07
Authors: Patel, K.D., Gulick, A.M.
PDB entry 7tgp: E176T/Y188G variant of the internal UBA Domain of HHR23A
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-01-08
Authors: Rothfuss, M., Bowler, B.E., McClelland, L.J., Sprang, S.R.
PDB entry 7tgq: Zinc finger antiviral protein (ZAP) central domain bound to ADP-ribose
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-01-09
Authors: Pornillos, O.P.
PDB entry 7tgr: Structure of SARS-CoV-2 main protease in complex with GC376
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2022-01-09
Authors: Esler, M.A., Shi, K., Aihara, H., Harris, R.S.
PDB entry 7tgs: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor JOMBt
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-01-09
Authors: Rangwala, A.M., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7tgt: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor A26
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2022-01-09
Authors: Rangwala, A.M., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7tgu: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B1
Classification: ISOMERASE/ISOMERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2022-01-09
Authors: Rangwala, A.M., Thakur, M.K., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7tgv: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B2
Classification: ISOMERASE/ISOMERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2022-01-09
Authors: Rangwala, A.M., Thakur, M.K., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7tgw: Omicron spike at 3.0 A (open form)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-01-09
Authors: Ye, G., Liu, B., Li, F.
PDB entry 7tgx: Prototypic SARS-CoV-2 G614 spike (open form)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-01-09
Authors: Ye, G., Liu, B., Li, F.
PDB entry 7tgy: Prototypic SARS-CoV-2 G614 spike (closed form)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-01-09
Authors: Ye, G., Liu, B., Li, F.
PDB entry 7th0: Escherichia coli RpnA-S
Classification: ANTITOXIN
Source organism: Escherichia coli str. K-12 substr. MG1655
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-01-10
Authors: Zhong, A., Hickman, A.B., Storz, G., Dyda, F.
PDB entry 7th1: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B3
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2022-01-10
Authors: Rangwala, A.M., Thakur, M.K., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7th2: Single-domain VHH intrabodies neutralize ricin toxin
Classification: IMMUNE SYSTEM/TOXIN
Source organism: Ricinus communis; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.838 Å
Deposited: 2022-01-10
Authors: Rudolph, M.J., Mantis, N.
PDB entry 7th3: Single-domain VHH intrabodies neutralize ricin toxin
Classification: IMMUNE SYSTEM/TOXIN
Source organism: Ricinus communis; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.292 Å
Deposited: 2022-01-10
Authors: Rudolph, M.J.
PDB entry 7th4: T. thermophilus methylenetetrahydrofolate reductase complex with 5-formyltetrahydrofolate
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-01-10
Authors: Yamada, K., Koutmos, M.
PDB entry 7th5: Thermus thermophilus methylenetetrahydrofolate reductase
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-01-10
Authors: Yamada, K., Koutmos, M.
PDB entry 7th6: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B21
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2022-01-10
Authors: Rangwala, A.M., Thakur, M.K., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7th7: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B23
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-01-10
Authors: Rangwala, A.M., Thakur, M.K., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7th8: Chickpea (Cicer arientinum) nodule-specific cysteine-rich peptide NCR13: Solution NMR structure of the isomer with C4:C10, C15:C30, and C23:C28 disulfide bonds
Classification: ANTIFUNGAL PROTEIN
Source organism: Cicer arientinum
Experimental method: SOLUTION NMR
Deposited: 2022-01-10
Authors: Buchko, G.W., Zhou, M., Shah, D.M., Velivelli, S.L.S.
PDB entry 7tha: Crystal structure of human transthyretin variant C10A/M13V
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-01-10
Authors: Jaeger, M., Mortenson, D.E., Yan, N.L., Kelly, J.W.
PDB entry 7thb: Crystal structure of an RNA-5'/DNA-3' strand exchange junction
Classification: DNA-RNA HYBRID
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2022-01-10
Authors: Cofsky, J.C., Knott, G.J., Gee, C.L., Doudna, J.A.
PDB entry 7thc: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B25
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-01-10
Authors: Rangwala, A.M., Thakur, M.K., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7thd: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B52
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2022-01-10
Authors: Rangwala, A.M., Thakur, M.K., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7the: Structure of RBD directed antibody DH1042 in complex with SARS-CoV-2 spike: Local refinement of RBD-Fab interface
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2022-01-10
Authors: May, A.J., Manne, K., Acharya, P.
PDB entry 7thf: Structure of Cyclophilin D Peptidyl-Prolyl Isomerase Domain bound to Macrocyclic Inhibitor B53
Classification: ISOMERASE/ISOMERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-01-10
Authors: Rangwala, A.M., Thakur, M.K., Seeliger, M.A., Peterson, A.A., Liu, D.R.
PDB entry 7thg: Crystal Structure Of Human NADH-Cytochrome B5 Reductase
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-01-10
Authors: Zheng, A., Thibodeau, P.H.
PDB entry 7thh: SUD-C and Ubl2 domains of SARS CoV-2 Nsp3 protein
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2022-01-11
Authors: Osipiuk, J., Jedrzejczak, R., Endres, M., Wydorski, P., Joachimiak, L., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7thi: Human Bisphosphoglycerate Mutase complexed with 2-phosphoglycolate
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2022-01-11
Authors: Clark, K.L., Kulathila, R., Wright, K., Isome, Y., Sage, D., Yang, Y., Christodoulou, C.
PDB entry 7thj: Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) in an autoinhibited conformation
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-01-11
Authors: Gaubitz, C., Liu, X., Pajak, J., Stone, N., Hayes, J., Demo, G., Kelch, B.A.
PDB entry 7thk: Cryo-EM structure of prefusion SARS-CoV-2 spike omicron B.1.1.529 variant
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2022-01-11
Authors: Cerutti, G., Shapiro, L.
PDB entry 7thm: SARS-CoV-2 nsp12/7/8 complex with a native N-terminus nsp9
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2022-01-11
Authors: Osinski, A., Tagliabracci, V.S., Chen, Z., Li, Y.
PDB entry 7thn: Crystal structure of PigI trapped with PigG using a proline adenosine vinylsulfonamide inhibitor
Classification: LIGASE
Source organism: Serratia sp. ATCC 39006
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-01-11
Authors: Corpuz, J.C., Podust, L.M.
PDB entry 7tho: Integrin alpha IIB beta3 complex with Eptifibatide
Classification: BLOOD CLOTTING/INHIBITOR
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-01-11
Authors: Zhu, J., Lin, F.-Y., Zhu, J., Springer, T.A.
PDB entry 7thq: Crystal structure of PltF trapped with PigG using a proline adenosine vinylsulfonamide inhibitor
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Pseudomonas protegens Pf-5; Serratia sp. ATCC 39006
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2022-01-11
Authors: Corpuz, J.C., Podust, L.M.
PDB entry 7thr: Cryo-electron microscopy of Adeno-associated virus serotype 4 at 2.2 A
Classification: VIRUS LIKE PARTICLE
Source organism: Adeno-associated virus - 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2022-01-11
Authors: Zane, G.M., Silveria, M.A., Meyer, N.L., White, T.A., Chapman, M.S.
PDB entry 7ths: Macrocyclic plasmin inhibitor
Classification: BLOOD CLOTTING, Hydrolase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-01-12
Authors: Guojie, W.
PDB entry 7tht: CryoEM structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1042
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2022-01-12
Authors: Manne, K., May, A., Acharya, P.
PDB entry 7thu: Structure of reduced bovine cytochrome c oxidase at 1.93 Angstrom resolution obtained by synchrotron X-rays
Classification: OXIDOREDUCTASE/MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2022-01-12
Authors: Ishigami, I., Rousseau, D.L., Yeh, S.-R.
PDB entry 7thv: Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) in an autoinhibited conformation
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-01-12
Authors: Gaubitz, C., Liu, X., Pajak, J., Stone, N., Hayes, J., Demo, G., Kelch, B.A.
PDB entry 7thw: Crystal Structure of the Soluble Domain of the Putative OmpA -Family Membrane Protein YPO0514 from Yersinia pestis
Classification: TRANSPORT PROTEIN
Source organism: Yersinia pestis CO92
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-01-12
Authors: Kim, Y., Tesar, C., Chhor, G., Clancy, S., Babnigg, G., Schneewind, O., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7thx: Cryo-EM structure of W6 possum enterovirus
Classification: VIRUS
Source organism: Possum enterovirus W6
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2022-01-12
Authors: Wang, I., Jayawardena, N., Strauss, M., Bostina, M.
PDB entry 7thy: Structure of Leucine Rich Repeat Kinase 2's ROC domain interacting with the microtubule facing the minus end
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2022-01-12
Authors: Matyszewski, M., Leschziner, A.E.
PDB entry 7thz: Structure of Leucine Rich Repeat Kinase 2's ROC domain interacting with the microtubule facing the plus end
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2022-01-12
Authors: Matyszewski, M., Leschziner, A.E.
PDB entry 7ti0: Structure of CTX-M-15 bound to RPX-7063 at 1.5A
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-01-12
Authors: Clifton, M.C., Abendroth, J., Hecker, S.J., Edwards, T.E.
PDB entry 7ti1: Structure of AmpC bound to RPX-7063 at 2.0A
Classification: HYDROLASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-01-12
Authors: Clifton, M.C., Abendroth, J., Edwards, T.E., Hecker, S.J.
PDB entry 7ti2: Structure of KPC-2 bound to RPX-7063 at 1.75A
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-01-12
Authors: Clifton, M.C., Fairman, J.W., Edwards, T.E., Hecker, S.J.
PDB entry 7ti3: [T:Hg2+:T--pH 11] Metal-mediated DNA base pair in tensegrity triangle
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.79 Å
Deposited: 2022-01-12
Authors: Lu, B., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7ti4: Adeno-associated Virus Go.1 at 2.9 Angstroms resolution, AAVGo.1 AAV-Go
Classification: VIRUS LIKE PARTICLE
Source organism: Adeno-associated virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2022-01-12
Authors: Silveria, M., Large, E.
PDB entry 7ti5: Adeno-associated virus Go.1 in Complex With Its Cellular Receptor AAVR at 2.4 Angstroms Resolution, AAVGo.1 AAVR
Classification: VIRUS LIKE PARTICLE
Source organism: Adeno-associated virus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-01-12
Authors: Silveria, M., Large, E.
PDB entry 7ti6: Crystal structure of the wild-type least mutated common ancestor (LMCA) of the HIV-targeting PCT64 antibody lineage
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2022-01-12
Authors: Omorodion, O., Wilson, I.A.
PDB entry 7ti7: Crystal Structure of UDP-N-acetylmuramoylalanine-D-glutamate ligase from Acinetobacter baumannii AB5075-UW in complex with ADP
Classification: LIGASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-01-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7ti8: Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Proliferating Cell Nuclear Antigen PCNA)
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-01-13
Authors: Gaubitz, C., Liu, X., Pajak, J., Stone, N., Hayes, J., Demo, G., Kelch, B.A.
PDB entry 7ti9: Crystal structure of the ubiquitin-like domain 1 (Ubl1) of Nsp3 from SARS-CoV-2, form 2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2022-01-13
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7tia: Crystal structure of SARS-CoV-2 3CL in complex with inhibitor NK01-14
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2022-01-13
Authors: Forouhar, F., Liu, H., Iketani, S., Zack, A., Khanizeman, N., Bednarova, E., Fowler, B., Hong, S.J., Mohri, H., Nair, M.S., Huang, Y., Tay, N.E.S., Lee, S., Karan, C., Resnick, S.J., Quinn, C., Li, W., Shion, H., Jurtschenko, C., Lauber, M.A., McDonald, T., Stokes, M.E., Hurst, B., Rovis, T., Chavez, A., Ho, D.D., Stockwell, B.R.
PDB entry 7tib: Structure of the yeast clamp loader (Replication Factor C RFC) bound to the open sliding clamp (Proliferating Cell Nuclear Antigen PCNA) and primer-template DNA
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-01-13
Authors: Gaubitz, C., Liu, X., Pajak, J., Stone, N., Hayes, J., Demo, G., Kelch, B.A.
PDB entry 7tic: Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) in an autoinhibited conformation
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-01-13
Authors: Gaubitz, C., Liu, X., Pajak, J., Stone, N., Hayes, J., Demo, G., Kelch, B.A.
PDB entry 7tid: Structure of the yeast clamp loader (Replication Factor C RFC) bound to the sliding clamp (Proliferating Cell Nuclear Antigen PCNA) and primer-template DNA
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-01-13
Authors: Gaubitz, C., Liu, X., Pajak, J., Stone, N., Hayes, J., Demo, G., Kelch, B.A.
PDB entry 7tie: Structure of oxidized bovine cytochrome c oxidase at 1.90 Angstrom resolution obtained by synchrotron X-rays
Classification: OXIDOREDUCTASE/MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-01-13
Authors: Ishigami, I., Rousseau, D.L., Yeh, S.-R.
PDB entry 7tif: 2.85 Angstroem crystal structure of Arginyltransferase 1 (ATE1) from Saccharomyces cerevisiae
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-01-13
Authors: Van, V., Ejimogu, N.-E., Smith, A.T.
PDB entry 7tih: Structure of oxidized bovine cytochrome c oxidase with reduced metal centers induced by synchrotron X-ray exposure
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-01-13
Authors: Ishigami, I., Rousseau, D.L., Yeh, S.-R., Russi, S., Cohen, A.
PDB entry 7tii: Annealed structure of oxidized bovine cytochrome c oxidase with reduced metal centers induced by synchrotron X-ray exposure
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-01-13
Authors: Ishigami, I., Rousseau, D.L., Yeh, S.-R., Russi, S., Cohen, A.
PDB entry 7tij: Cardiac F-actin decorated with regulatory M-domain of cardiac myosin binding protein C
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2022-01-13
Authors: Risi, C.M., Galkin, V.E.
PDB entry 7tik: Structure of the SARS-CoV-2 Omicron spike post-fusion bundle
Classification: VIRAL PROTEIN
Source organism: Nostoc punctiforme PCC 73102; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-01-13
Authors: Yang, K., Brunger, A.T.
PDB entry 7til: CryoEM structure of JetD from Pseudomonas aeruginosa
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PA14
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-01-13
Authors: Deep, A., Gu, Y., Gao, Y., Ego, K., Herzik, M., Zhou, H., Corbett, K.
PDB entry 7tim: STRUCTURE OF THE TRIOSEPHOSPHATE ISOMERASE-PHOSPHOGLYCOLOHYDROXAMATE COMPLEX: AN ANALOGUE OF THE INTERMEDIATE ON THE REACTION PATHWAY
Classification: INTRAMOLECULAR OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1991-04-23
Authors: Davenport, R.C., Bash, P.A., Seaton, B.A., Karplus, M., Petsko, G.A., Ringe, D.
PDB entry 7tin: The Structure of S. aureus MenD
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-01-14
Authors: Johnston, J.M., Stanborough, T., Ho, N.A.T., Akazong, E.W., Jiao, W.
PDB entry 7tio: B Domain of Staphylococcal protein A: Native backbone
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-01-14
Authors: Santhouse, J.R., Leung, J.M.G., Chong, L.T., Horne, W.S.
PDB entry 7tip: Backbone-modified variant of the B domain of Staphylococcal protein A: beta3-residues in helix 2
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-01-14
Authors: Santhouse, J.R., Leung, J.M.G., Chong, L.T., Horne, W.S.
PDB entry 7tiq: Backbone-modified variant of the B domain of Staphylococcal protein A: Aib residues in helix 2
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-01-14
Authors: Santhouse, J.R., Leung, J.M.G., Chong, L.T., Horne, W.S.
PDB entry 7tir: Backbone-modified variant of the B domain of Staphylococcal protein A: beta3-residues in helix 3
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-01-14
Authors: Santhouse, J.R., Leung, J.M.G., Chong, L.T., Horne, W.S.
PDB entry 7tis: Backbone-modified variant of the B domain of Staphylococcal protein A: Aib residues in helix 3
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-01-14
Authors: Santhouse, J.R., Leung, J.M.G., Chong, L.T., Horne, W.S.
PDB entry 7tit: Cardiac thin filament decorated with regulatory M-domain of cardiac myosin binding protein C
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2022-01-14
Authors: Risi, C.M., Galkin, V.E.
PDB entry 7tiu: Crystal structure of SARS-CoV-2 3CL in complex with inhibitor EB46
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-01-14
Authors: Forouhar, F., Liu, H., Iketani, S., Zack, A., Khanizeman, N., Bednarova, E., Fowler, B., Hong, S.J., Mohri, H., Nair, M.S., Huang, Y., Tay, N.E.S., Lee, S., Karan, C., Resnick, S.J., Quinn, C., Li, W., Shion, H., Jurtschenko, C., Lauber, M.A., McDonald, T., Stokes, M.E., Hurst, B., Rovis, T., Chavez, A., Ho, D.D., Stockwell, B.R.
PDB entry 7tiv: Crystal structure of SARS-CoV-2 3CL in complex with inhibitor EB48
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-01-14
Authors: Forouhar, F., Liu, H., Iketani, S., Zack, A., Khanizeman, N., Bednarova, E., Fowler, B., Hong, S.J., Mohri, H., Nair, M.S., Huang, Y., Tay, N.E.S., Lee, S., Karan, C., Resnick, S.J., Quinn, C., Li, W., Shion, H., Jurtschenko, C., Lauber, M.A., McDonald, T., Stokes, M.E., Hurst, B., Rovis, T., Chavez, A., Ho, D.D., Stockwell, B.R.
PDB entry 7tiw: Crystal structure of SARS-CoV-2 3CL in complex with inhibitor EB54
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2022-01-14
Authors: Forouhar, F., Liu, H., Iketani, S., Zack, A., Khanizeman, N., Bednarova, E., Fowler, B., Hong, S.J., Mohri, H., Nair, M.S., Huang, Y., Tay, N.E.S., Lee, S., Karan, C., Resnick, S.J., Quinn, C., Li, W., Shion, H., Jurtschenko, C., Lauber, M.A., McDonald, T., Stokes, M.E., Hurst, B., Rovis, T., Chavez, A., Ho, D.D., Stockwell, B.R.
PDB entry 7tix: Crystal structure of SARS-CoV-2 3CL in complex with inhibitor EB56
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-01-14
Authors: Forouhar, F., Liu, H., Iketani, S., Zack, A., Khanizeman, N., Bednarova, E., Fowler, B., Hong, S.J., Mohri, H., Nair, M.S., Huang, Y., Tay, N.E.S., Lee, S., Karan, C., Resnick, S.J., Quinn, C., Li, W., Shion, H., Jurtschenko, C., Lauber, M.A., McDonald, T., Stokes, M.E., Hurst, B., Rovis, T., Chavez, A., Ho, D.D., Stockwell, B.R.
PDB entry 7tiy: Crystal structure of SARS-CoV-2 3CL in complex with inhibitor NK01-48
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2022-01-14
Authors: Forouhar, F., Liu, H., Iketani, S., Zack, A., Khanizeman, N., Bednarova, E., Fowler, B., Hong, S.J., Mohri, H., Nair, M.S., Huang, Y., Tay, N.E.S., Lee, S., Karan, C., Resnick, S.J., Quinn, C., Li, W., Shion, H., Jurtschenko, C., Lauber, M.A., McDonald, T., Stokes, M.E., Hurst, B., Rovis, T., Chavez, A., Ho, D.D., Stockwell, B.R.
PDB entry 7tiz: Crystal structure of SARS-CoV-2 3CL in complex with inhibitor NK01-63
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-01-14
Authors: Forouhar, F., Liu, H., Iketani, S., Zack, A., Khanizeman, N., Bednarova, E., Fowler, B., Hong, S.J., Mohri, H., Nair, M.S., Huang, Y., Tay, N.E.S., Lee, S., Karan, C., Resnick, S.J., Quinn, C., Li, W., Shion, H., Jurtschenko, C., Lauber, M.A., McDonald, T., Stokes, M.E., Hurst, B., Rovis, T., Chavez, A., Ho, D.D., Stockwell, B.R.
PDB entry 7tj0: Crystal structure of SARS-CoV-2 3CL in complex with inhibitor SL-4-241
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2022-01-14
Authors: Forouhar, F., Liu, H., Iketani, S., Zack, A., Khanizeman, N., Bednarova, E., Fowler, B., Hong, S.J., Mohri, H., Nair, M.S., Huang, Y., Tay, N.E.S., Lee, S., Karan, C., Resnick, S.J., Quinn, C., Li, W., Shion, H., Jurtschenko, C., Lauber, M.A., McDonald, T., Stokes, M., Hurst, B., Rovis, T., Chavez, A., Ho, D.D., Stockwell, B.R.
PDB entry 7tj1: Crystal Structure of the Putative Fluoride Ion Transporter CrcB Bab1_1389 from Brucella abortus
Classification: UNKNOWN FUNCTION
Source organism: Brucella abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-01-14
Authors: Kim, Y., Tesar, C., Pastore, T., Endres, M., Babnigg, G., Crosson, S., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7tj2: SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-01-14
Authors: Frazier, M.N., Krahn, J.M., Butay, K.J., Dillard, L.B., Borgnia, M.J., Stanley, R.E.
PDB entry 7tj3: Crystal structure of a dihydrofolate reductase folA from Stenotrophomonas maltophilia bound to NADP and p218
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Stenotrophomonas maltophilia K279a
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-01-14
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7tj4: Structure of the S. aureus amidase LytH and activator ActH extracellular domains
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-01-14
Authors: Page, J.E., Skiba, M.A., Kruse, A.C., Walker, S.
PDB entry 7tj5: SthK closed state, cAMP-bound in the presence of POPA
Classification: TRANSPORT PROTEIN
Source organism: Spirochaeta thermophila DSM 6578
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2022-01-14
Authors: Schmidpeter, P.A., Nimigean, C.M.
PDB entry 7tj6: SthK open state, cAMP-bound in the presence of POPA
Classification: TRANSPORT PROTEIN
Source organism: Spirochaeta thermophila DSM 6578
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-01-14
Authors: Schmidpeter, P.A., Nimigean, C.M.
PDB entry 7tj7: Cardiac thin filament decorated with C1 Ig-domain and regulatory M-domain of cardiac myosin binding protein C (cMyBP-C)
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2022-01-14
Authors: Risi, C.M., Galkin, V.E.
PDB entry 7tj8: Cryo-EM structure of the human Nax channel in complex with beta3 solved in nanodiscs
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-01-14
Authors: Noland, C.L., Kschonsak, M., Ciferri, C., Payandeh, J.
PDB entry 7tj9: Cryo-EM structure of the human Nax channel in complex with beta3 solved in GDN
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-01-14
Authors: Noland, C.L., Kschonsak, M., Ciferri, C., Payandeh, J.
PDB entry 7tja: Structure of the Light Harvesting Complex PE545 from Proteomonas sulcata
Classification: PHOTOSYNTHESIS
Source organism: Proteomonas sulcata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-01-15
Authors: Jeffrey, P.D., Spangler, L.C., Scholes, G.D.
PDB entry 7tjb: Structure of Neisseria gonorrhoeae peptidoglycan O-acetyltransferase B (PatB)
Classification: TRANSFERASE
Source organism: Neisseria gonorrhoeae FA 1090
Experimental method: X-RAY DIFFRACTION
Resolution: 1.30003 Å
Deposited: 2022-01-15
Authors: Brott, A.S., Stangherlin, S., Clarke, A.J.
PDB entry 7tjc: VHH Chl-B2 in complex with Chloramphenicol
Classification: IMMUNE SYSTEM
Source organism: Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-01-16
Authors: Nordeen, S.A., Schwartz, T.U.
PDB entry 7tjd: Bacteriophage Q beta capsid protein in T1 symmetry
Classification: VIRUS LIKE PARTICLE
Source organism: Escherichia virus Qbeta
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2022-01-16
Authors: Jin, X.
PDB entry 7tje: Bacteriophage Q beta capsid protein A38K
Classification: VIRUS LIKE PARTICLE
Source organism: Bacteriophage sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.799 Å
Deposited: 2022-01-16
Authors: Jin, X.
PDB entry 7tjf: S. cerevisiae ORC bound to 84 bp ARS1 DNA
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-01-16
Authors: Schmidt, J.M., Yang, R., Kumar, A., Hunker, O., Bleichert, F.
PDB entry 7tjg: Bacteriophage Q beta capsid protein, A38K/A40C/D102C in T1 symmetry
Classification: VIRUS LIKE PARTICLE
Source organism: Bacteriophage sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 3.903 Å
Deposited: 2022-01-16
Authors: Jin, X.
PDB entry 7tjh: S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 1) with flexible Orc6 N-terminal domain
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-01-16
Authors: Schmidt, J.M., Yang, R., Kumar, A., Hunker, O., Bleichert, F.
PDB entry 7tji: S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 2) with flexible Orc6 N-terminal domain
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-01-16
Authors: Schmidt, J.M., Yang, R., Kumar, A., Hunker, O., Bleichert, F.
PDB entry 7tjj: S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 1) with docked Orc6 N-terminal domain
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-01-16
Authors: Schmidt, J.M., Yang, R., Kumar, A., Hunker, O., Bleichert, F.
PDB entry 7tjk: S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 2) with docked Orc6 N-terminal domain
Classification: REPLICATION/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-01-16
Authors: Schmidt, J.M., Yang, R., Kumar, A., Hunker, O., Bleichert, F.
PDB entry 7tjl: Crystal structure of de novo designed protein, SEWN0.1
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2022-01-16
Authors: Cummins, M.C., Jacobs, T.M., Kuhlman, B.
PDB entry 7tjm: Bacteriophage Q beta capsid protein in T3 symmetry
Classification: VIRUS LIKE PARTICLE
Source organism: Bacteriophage sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 3.54 Å
Deposited: 2022-01-16
Authors: Jin, X.
PDB entry 7tjo: HIV-1 gp120 complex with CJF-II-197-S
Classification: VIRUS
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2022-01-16
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 7tjp: HIV-1 gp120 complex with CJF-II-195
Classification: VIRUS
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2022-01-16
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 7tjq: SAN27-14 bound to a antigenic site V on prefusion-stabilized hMPV F
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human metapneumovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2022-01-16
Authors: Hsieh, C.-L., McLellan, J.S., Rush, S.A.
PDB entry 7tjs: Yeast ATP synthase F1 region State 1-3catalytic beta_tight closed without exogenous ATP
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tjt: Yeast ATP synthase F1 region State 1-3catalytic beta_tight open without exogenous ATP
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tju: Yeast ATP synthase F1 region State 1-3binding beta_tight open without exogenous ATP
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tjv: Yeast ATP synthase F1 region State 1catalytic(a) with 10 mM ATP
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tjw: Yeast ATP synthase F1 region State 1catalytic(e-h) with 10 mM ATP
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tjx: Yeast ATP synthase F1 region State 1binding(a-d) with 10 mM ATP
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tjy: Yeast ATP synthase State 1catalytic(a) without exogenous ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tjz: Yeast ATP synthase State 1catalytic(b) without exogenous ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk0: Yeast ATP synthase State 1catalytic(c) without exogenous ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk1: Yeast ATP synthase State 1catalytic(d) without exogenous ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk2: Yeast ATP synthase State 1binding(a) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk3: Yeast ATP synthase State 1binding(b) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk4: Yeast ATP synthase State 1binding(c) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk5: Yeast ATP synthase State 1binding(d) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.8 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk6: Yeast ATP synthase State 1catalytic(a) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk7: Yeast ATP synthase State 1catalytic(b) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk8: Yeast ATP synthase State 1catalytic(c) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tk9: Yeast ATP synthase State 1catalytic(d) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tka: Yeast ATP synthase State 1catalytic(e) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkb: Yeast ATP synthase State 1catalytic(f) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkc: Yeast ATP synthase State 1catalytic(g) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.8 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkd: Yeast ATP synthase State 1catalytic(h) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.7 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tke: Yeast ATP synthase State 2binding(a) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkf: Yeast ATP synthase State 2binding(b) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkg: Yeast ATP synthase State 2catalytic(a) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.
PDB entry 7tkh: Yeast ATP synthase State 2catalytic(b) with 10 mM ATP backbone model
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-01-17
Authors: Guo, H., Rubinstein, J.L.