LiteFold/PDB huggingface dataset:
PDB entry 8v2l: Crystal structure of IRAK4 kinase domain with compound 8
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-11-22
Authors: Weiss, M.M., Zheng, X., Browne, C.M., Campbell, V., Chen, D., Enerson, B., Fei, X., Huang, X., Klaus, C.R., Li, H., Mayo, M., McDonald, A.A., Paul, A., Sharma, K., Shi, Y., Slavin, A., Walter, D.M., Yuan, K., Zhang, Y., Zhu, X., Kelleher, J., Ji, N., Walker, D., Mainolfi, N.
PDB entry 8v2m: Structure of Asterias rubens peptide (KASH2)
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2023-11-23
Authors: Takjoo, R., Daly, N.L.
PDB entry 8v2n: Human SIRT3 co-crystallized with ligands, including p53-AMC peptide and Carba-NAD
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2023-11-23
Authors: Chakrabarti, R., Ghosh, A., Guan, X., Upadhyay, A., Dumpati, R.K., Munshi, S., Roy, S., Chall, S., Rahnamoun, A., Reverdy, C., Errasti, G., Delacroix, T.
PDB entry 8v2o: Cryo-EM Structure of Wildtype Smooth Muscle Gamma Actin (ACTG2)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2023-11-23
Authors: Palmer, N.J., Carman, P.J., Ceron, R.H., Dominguez, R.
PDB entry 8v2q: CHMP1B/IST1 ssRNA bound copolymer
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-11-23
Authors: Talledge, N., Laughlin, T.G., Alian, A.
PDB entry 8v2r: CryoEM of ssDNA bound CHMP1B/IST1 copolymer assembly
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2023-11-23
Authors: Talledge, N., Laughlin, T.G., Alian, A.
PDB entry 8v2s: CHMP1B/IST1 dsDNA bound copolymer
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-11-23
Authors: Talledge, N., Laughlin, T.G., Alian, A.
PDB entry 8v2t: Phosphoheptose isomerase GMHA from Burkholderia pseudomallei bound to inhibitor Mut148591
Classification: ISOMERASE/INHIBITOR
Source organism: Burkholderia pseudomallei 1106a
Experimental method: X-RAY DIFFRACTION
Resolution: 1.402 Å
Deposited: 2023-11-23
Authors: Junop, M.S., Brown, C., Szabla, R.
PDB entry 8v2u: Structure of Asterias rubens peptide KASH2-amide
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2023-11-23
Authors: Takjoo, R., Le Quilliec, J., Daly, N.L.
PDB entry 8v2v: Solution NMR structure of recifin A [Y6F]
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2023-11-23
Authors: Payne, C.D., Schroeder, C.I., Rosengren, K.J.
PDB entry 8v2w: Crystal Structure of the ancestral triosephosphate isomerase reconstruction of the last opisthokont common ancestor obtained by Bayesian inference
Classification: ISOMERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2023-11-24
Authors: Perez-Nino, J.A., Rodriguez-Romero, A., Guerra, Y., Fernandez-Velasco, D.A.
PDB entry 8v2x: Crystal Structure of the reconstruction of the worst case of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by bayesian inference
Classification: ISOMERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2023-11-24
Authors: Perez-Nino, J.A., Rodriguez-Romero, A., Guerra-Borrego, Y., Fernandez-Velasco, D.A.
PDB entry 8v2y: Room temperature X-ray Crystal Structure of FMN-bound long-chain flavodoxin from Rhodopseudomonas palustris
Classification: FLAVOPROTEIN
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2023-11-24
Authors: Ansari, A., Khan, S.A., Miller, A.F.
PDB entry 8v2z: Cryo-EM Structure of Smooth Muscle Gamma Actin (ACTG2) Mutant R257C
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-11-25
Authors: Palmer, N.J., Carman, P.J., Ceron, R.H., Dominguez, R.
PDB entry 8v30: Smooth Muscle Gamma Actin (ACTG2) Filament Mutant R40C
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2023-11-25
Authors: Palmer, N.J., Carman, P.J., Ceron, R.H., Dominguez, R.
PDB entry 8v31: Structure of Alistipes sp. 3-Keto-2-hydroxy-glucal-hydratase AL2
Classification: HYDROLASE
Source organism: Alistipes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-11-25
Authors: Lazarski, A.C., Worrall, L.J., Strynadka, N.C.J.
PDB entry 8v32: TnsD-TnsC-DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Peltigera membranacea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2023-11-26
Authors: Chang, L., Wang, S.
PDB entry 8v33: Crystal structure of S. aureus TarL N-terminal domain
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-11-26
Authors: Li, F.K.K., Strynadka, N.C.J.
PDB entry 8v34: Crystal structure of S. aureus TarK N-terminal domain
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-11-26
Authors: Li, F.K.K., Strynadka, N.C.J.
PDB entry 8v35: Crystal structure of HpsN from Cupriavidus pinatubonensis
Classification: OXIDOREDUCTASE
Source organism: Cupriavidus pinatubonensis JMP134
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-11-27
Authors: Lee, M.
PDB entry 8v36: Crystal structure of DHPS-3-dehydrogenase, HpsN from Cupriavidus pinatubonensis in complex with NADH
Classification: OXIDOREDUCTASE
Source organism: Cupriavidus pinatubonensis JMP134
Experimental method: X-RAY DIFFRACTION
Resolution: 2.235 Å
Deposited: 2023-11-27
Authors: Lee, M.
PDB entry 8v37: Crystal structure of HpsN D352A mutant from Cupriavidus pinatubonensis in complex with NAD+
Classification: OXIDOREDUCTASE
Source organism: Cupriavidus pinatubonensis JMP134
Experimental method: X-RAY DIFFRACTION
Resolution: 2.228 Å
Deposited: 2023-11-27
Authors: Lee, M.
PDB entry 8v38: Structure of the human systemic RNAi defective transmembrane protein 1 (hSIDT1)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-11-27
Authors: Navratna, V., Kumar, A., Rana, J.K., Mosalaganti, S.
PDB entry 8v39: Crystal structure of active KRAS-G12C (GMPPNP-bound) in complex with BBO-8520
Classification: ONCOPROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-11-27
Authors: Chan, A.H., Ashraf, M., Dharmaiah, S., Simanshu, D.K.
PDB entry 8v3a: Crystal structure of KRAS-G12C (GDP-bound) in complex with BBO-8520
Classification: ONCOPROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2023-11-27
Authors: Chan, A.H., Bratcher, D.R., Simanshu, D.K.
PDB entry 8v3b: Computational Designed Nanocage O43_129_+4
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.4 Å
Deposited: 2023-11-27
Authors: Carr, K.D., Weidle, C., Borst, A.J.
PDB entry 8v3c: AgamOR28 structure without ligand
Classification: MEMBRANE PROTEIN
Source organism: Anopheles gambiae; Apocrypta bakeri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2023-11-27
Authors: Zhao, J., del Marmol, J.
PDB entry 8v3d: AgamOR28 structure bound to 2,4,5-trimethylthiazole
Classification: MEMBRANE PROTEIN
Source organism: Anopheles gambiae; Apocrypta bakeri
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-11-27
Authors: Zhao, J., del Marmol, J.
PDB entry 8v3e: Structure of Myroides odoratus phage Tad2 in apo state
Classification: VIRAL PROTEIN
Source organism: Myroides odoratus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2023-11-27
Authors: Lu, A., Kranzusch, P.J.
PDB entry 8v3g: Cryo-EM structure of the KCa2.2 channel with inhibitor UCL 1684.
Classification: TRANSPORT PROTEIN/INHIBITOR
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-11-27
Authors: Nam, Y.W., Zhang, M.
PDB entry 8v3j: Structure-Based Engineering of a Highly Immunogenic, Conformationally Stabilized FimH Antigen for a Urinary Tract Infection Vaccine
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.898 Å
Deposited: 2023-11-28
Authors: Jasti, J.
PDB entry 8v3k: F95S-F198S epi-Isozizaene Synthase: complex with 3 Mg2+, inorganic pyrophosphate, and benzyl triethyl ammonium cation
Classification: LYASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2023-11-28
Authors: Christianson, D.W., Eaton, S.A.
PDB entry 8v3l: Microtubule inner proteins in the 48-nm doublet microtubule from the proximal region of Tetrahymena thermophila strain K40R
Classification: STRUCTURAL PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-11-28
Authors: Legal, T., Bui, K.H.
PDB entry 8v3m: CCP5 apo structure
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-11-28
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v3n: CCP5 in complex with Glu-P-Glu transition state analog
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-11-28
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v3o: CCP5 in complex with Glu-P-peptide 1 transition state analog
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-11-28
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v3p: CCP5 in complex with Glu-P-peptide 2 transition state analog
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2023-11-28
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v3q: Structure of CCP5 class1
Classification: HYDROLASE/SUBSTRATE
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-11-28
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v3r: Structure of CCP5 class2
Classification: HYDROLASE/SUBSTRATE
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-11-28
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v3s: Structure of CCP5 class3
Classification: HYDROLASE/SUBSTRATE
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-11-28
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v3t: CryoEM Structure of Diffocin - precontracted - Collar
Classification: VIRUS LIKE PARTICLE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-11-28
Authors: Cai, X.Y., He, Y., Zhou, Z.H.
PDB entry 8v3u: ACAD11 D220A with 4-hydroxyvaleryl-CoA
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-11-28
Authors: Zhang, J., Bartlett, A., Rashan, E., Yuan, P., Pagliarini, D.
PDB entry 8v3v: ACAD11 D753N with 4-phosphovaleryl-CoA
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-11-28
Authors: Zhang, J., Bartlett, A., Rashan, E., Yuan, P., Pagliarini, D.
PDB entry 8v3w: CryoEM Structure of Diffocin - precontracted - Baseplate - focused refinement on triplex region
Classification: VIRUS LIKE PARTICLE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-11-28
Authors: Cai, X.Y., He, Y., Zhou, Z.H.
PDB entry 8v3x: CryoEM Structure of Diffocin - precontracted - Trunk
Classification: VIRUS LIKE PARTICLE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-11-28
Authors: Cai, X.Y., He, Y., Zhou, Z.H.
PDB entry 8v3y: CryoEM Structure of Diffocin - postcontracted - Trunk
Classification: VIRUS LIKE PARTICLE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-11-28
Authors: Cai, X.Y., He, Y., Zhou, Z.H.
PDB entry 8v3z: CryoEM Structure of Diffocin - postcontracted - Collar - transitional state
Classification: VIRUS LIKE PARTICLE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-11-28
Authors: Cai, X.Y., He, Y., Zhou, Z.H.
PDB entry 8v40: CryoEM Structure of Diffocin - postcontracted - Collar - final state
Classification: VIRUS LIKE PARTICLE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-11-28
Authors: Cai, X.Y., He, Y., Zhou, Z.H.
PDB entry 8v41: CryoEM Structure of Diffocin - postcontracted - Baseplate - transitional state
Classification: VIRUS LIKE PARTICLE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2023-11-28
Authors: Cai, X.Y., He, Y., Zhou, Z.H.
PDB entry 8v42: Structure of Human Vaccinia-related Kinase 1 (VRK1) Bound to ACH000400
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-11-28
Authors: Counago, R.M., de Souza, G.P., Azevedo, A., Guimaraes, C., Mascarello, A., Gama, F., Ferreira, M., Arruda, P.
PDB entry 8v43: CryoEM Structure of Diffocin - postcontracted - Baseplate - final state
Classification: VIRUS LIKE PARTICLE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2023-11-28
Authors: Cai, X.Y., He, Y., Zhou, Z.H.
PDB entry 8v44: N-terminal truncation of CRISPR-associated DinG
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-11-28
Authors: Hallmark, T., Jackson, R.N.
PDB entry 8v45: CryoEM structure of AriA-Ocr complex
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli B185; Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2023-11-28
Authors: Deep, A., Corbett, K.D.
PDB entry 8v46: CryoEM structure of AriA-AriB complex (Form I)
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli B185
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2023-11-28
Authors: Deep, A., Corbett, K.D.
PDB entry 8v47: CryoEM structure of AriA-AriB complex (Form II)
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli B185
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.08 Å
Deposited: 2023-11-28
Authors: Deep, A., Corbett, K.D.
PDB entry 8v48: CryoEM structure of AriA-AriB complex (Form III)
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli B185
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2023-11-28
Authors: Deep, A., Corbett, K.D.
PDB entry 8v49: CryoEM structure of AriA (E393Q) sensory subunit
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli B185
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2023-11-28
Authors: Deep, A., Corbett, K.D.
PDB entry 8v4a: Proteus vulgaris tryptophan indole-lyase complexed with L-ethionine
Classification: LYASE
Source organism: Proteus vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-11-28
Authors: Phillips, R.S.
PDB entry 8v4b: NMR structure of a synthetic analogue of Ramoplanin A2
Classification: ANTIBIOTIC
Experimental method: SOLUTION NMR
Deposited: 2023-11-28
Authors: Swarbrick, J.D., Marschall, E.A., Cryle, M.J., Tailhades, J.
PDB entry 8v4f: Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2023-11-29
Authors: Hallberg, B.M., Das, H.
PDB entry 8v4g: X-ray structure of the NADP-dependent reductase from Campylobacter jejuni responsible for the synthesis of CDP-glucitol in the presence of CDP and NADP
Classification: OXIDOREDUCTASE
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-11-29
Authors: Schumann, M.E., Thoden, J.B., Holden, H.M., Raushel, F.M.
PDB entry 8v4h: X-ray structure of the NADP-dependent reductase from Campylobacter jejuni responsible for the synthesis of CDP-glucitol in the presence of CDP-glucitol
Classification: OXIDOREDUCTASE
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-11-29
Authors: Thoden, J.B., Schumann, M.E., Holden, H.M., Raushel, F.M.
PDB entry 8v4i: Structure of bovine anti-HIV Fab ElsE1
Classification: IMMUNE SYSTEM
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-11-29
Authors: Stanfield, R.L., Wilson, I.A.
PDB entry 8v4j: Phosphoheptose isomerase GMHA from Burkholderia pseudomallei bound to inhibitor Mut148233
Classification: ISOMERASE/INHIBITOR
Source organism: Burkholderia pseudomallei 1106a
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2023-11-29
Authors: Junop, M.S., Brown, C., Szabla, R.
PDB entry 8v4k: CCP5 in complex with microtubules class1
Classification: HYDROLASE/SUBSTRATE,STRUCTURAL PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-11-29
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v4l: CCP5 in complex with microtubules class2
Classification: HYDROLASE/SUBSTRATE,STRUCTURAL PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-11-29
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v4m: CCP5 in complex with microtubules class3
Classification: HYDROLASE/SUBSTRATE,STRUCTURAL PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-11-29
Authors: Chen, J., Zehr, E.A., Gruschus, J.M., Szyk, A., Liu, Y., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 8v4n: Myxococcus xanthus EncA 3xHis pore mutant with T=1 icosahedral symmetry
Classification: VIRUS LIKE PARTICLE
Source organism: Myxococcus xanthus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2023-11-29
Authors: Szyszka, T.N., Andreas, M.P., Lie, F., Miller, L.M., Adamson, L.S.R., Fatehi, F., Twarock, R., Draper, B.E., Jarrold, M.F., Giessen, T.W., Lau, Y.H.
PDB entry 8v4o: Crystal structure of Acetyl-CoA synthetase 2 in complex with AMP from Candida albicans
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-11-29
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8v4p: Crystal structure of Acetyl-CoA synthetase 2 in complex with Adenosine-5'-allylphosphate from Candida albicans
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-11-29
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8v4q: Myxococcus xanthus EncA 3xHis pore mutant with tetrahedral symmetry
Classification: VIRUS LIKE PARTICLE
Source organism: Myxococcus xanthus DK 1622
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2023-11-29
Authors: Szyszka, T.N., Andreas, M.P., Lie, F., Miller, L.M., Adamson, L.S.R., Fatehi, F., Twarock, R., Draper, B.E., Jarrold, M.F., Giessen, T.W., Lau, Y.H.
PDB entry 8v4r: Crystal structure of Acetyl-CoA synthetase 2 in complex with AMP and CoA from Candida albicans
Classification: LIGASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-11-29
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8v4s: Cryo-EM structure of the rat P2X7 receptor in the apo closed state purified in the absence of sodium
Classification: MEMBRANE PROTEIN
Source organism: Rattus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2023-11-29
Authors: Oken, A.C., Lisi, N.E., Krishnamurthy, I., McCarthy, A.E., Godsey, M.H., Glasfeld, A., Mansoor, S.E.
PDB entry 8v4t: The Native DNA 16-mer sequence 5'-GCTGCGTTAACGCAGC-3
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2023-11-29
Authors: Terrell, J.R., Wilson, W.D.
PDB entry 8v4u: Structure of SARS-CoV-2 main protease in complex with a covalent inhibitor
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.819 Å
Deposited: 2023-11-29
Authors: Greasley, S.E., Ferre, R.A., Liu, W.
PDB entry 8v4v: Nan Regulatory Protein Full-length from Streptococcus pneumoniae
Classification: TRANSCRIPTION
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2023-11-29
Authors: Wood, D.M., Dobson, R.C.J., Horne, C.R.
PDB entry 8v4w: Crystal structure of Campylobacter concisus Csep1
Classification: UNKNOWN FUNCTION
Source organism: Campylobacter concisus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-11-29
Authors: Anna, R., Xiaotian, Z.
PDB entry 8v4x: Structure of MALT1 in complex with an allosteric inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.486 Å
Deposited: 2023-11-29
Authors: Judge, R.A., Pappano, W.N.
PDB entry 8v4y: Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h at inactive SHL2 (conformation 1)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-11-29
Authors: Chio, U.S., Palovcak, E., Armache, J.P., Narlikar, G.J., Cheng, Y.
PDB entry 8v4z: Crystal structure of a HLA-B*35:01-NP7 with D1 TCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-11-29
Authors: Littler, D.R., Rossjohn, J.
PDB entry 8v50: Crystal structure of a HLA-B*35:01-NP6 with D1 TCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65002 Å
Deposited: 2023-11-30
Authors: Littler, D.R., Rossjohn, J., Gras, S.
PDB entry 8v51: Crystal structure of a HLA-B*35:01-NP10 with D1 TCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-11-30
Authors: Littler, D.R., Rossjohn, J., Gras, S.
PDB entry 8v52: Crystal structure of 2A10 Fab bound to Human TGF-beta3
Classification: CYTOKINE/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-11-30
Authors: Yin, J., Lupardus, P.J.
PDB entry 8v53: CryoEM structure of Ku homodimer in complex with hairpin DNA
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-11-30
Authors: Baral, J., Rouiller, I., Das, A.K.
PDB entry 8v54: Engaged conformation of the human mitochondrial DNA polymerase gamma bound to DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-11-30
Authors: Riccio, A.A., Krahn, J.M., Bouvette, J., Borgnia, J.M., Copeland, W.C.
PDB entry 8v55: Human mitochondrial DNA polymerase gamma bound to a replication fork in an open conformation
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-11-30
Authors: Riccio, A.A., Krahn, J.M., Bouvette, J., Borgnia, M.J., Copeland, W.C.
PDB entry 8v56: UIC-1 mutant - UIC-1-B5W
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.98 Å
Deposited: 2023-11-30
Authors: Heinz-Kunert, S.L.
PDB entry 8v57: Complex of murine cathepsin K with bound cystatin C inhibitor
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-11-30
Authors: Pedersen, L.C., Xu, D.
PDB entry 8v58: Complex of murine cathepsin K with bound heparan sulfate 12mer
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-11-30
Authors: Pedersen, L.C., Xu, D., Krahn, J.M.
PDB entry 8v59: UIC-1 mutant - UIC-1-B5I
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2023-11-30
Authors: Heinz-Kunert, S.L.
PDB entry 8v5a: Prefusion-stabilized Respirovirus type 3 Fusion protein
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human respirovirus 3; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-11-30
Authors: Johnson, N.V., McLellan, J.S.
PDB entry 8v5b: Structure of the oxygen-insensitive NAD(P)H-dependent nitroreductase NfsB_Ec F70A/F108Y in complex with FMN
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-11-30
Authors: Sharrock, A.V., Ackerley, D.F., Arcus, V.
PDB entry 8v5c: IpaD (122-321) Bound to Deoxycholate
Classification: CELL INVASION
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-11-30
Authors: Barker, S.A., Dickenson, N.E., Johnson, S.J.
PDB entry 8v5d: Human mitochondrial DNA polymerase catalytic subunit, PolG, in an APO conformation
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-11-30
Authors: Riccio, A.A., Brannon, A.J., Krahn, J.M., Bouvette, J., Borgnia, J.M., Copeland, W.C.
PDB entry 8v5e: IpaD (122-321) Pi-helix Mutant (delta Q148) Bound to Deoxycholate
Classification: CELL INVASION
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-11-30
Authors: Barker, S.A., Dickenson, N.E., Johnson, S.J.
PDB entry 8v5f: Nan Regulatory Protein Full-length from Streptococcus pneumoniae
Classification: TRANSCRIPTION
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-11-30
Authors: Wood, D.M., Dobson, R.C.J., Horne, C.R.
PDB entry 8v5g: Crystal Structure of Acetyl-CoA synthetase from Cryptococcus neoformans H99 in complex with an ethylsulfamide AMP inhibitor
Classification: LIGASE
Source organism: Cryptococcus neoformans var. grubii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-11-30
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8v5h: Crystal structure of MASTL Kinase domain in complex with an inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2023-11-30
Authors: Greasley, S.E., Diehl, W.
PDB entry 8v5i: Crystal structure of MAP4K4 in complex with an inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2023-11-30
Authors: Greasley, S.E., Diehl, W.
PDB entry 8v5j: The Native DNA 16-mer Sequence 5'-GCTGGATTAATCCAGC-3
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2023-11-30
Authors: Terrell, J.R., Wilson, W.D.
PDB entry 8v5k: Structure of the Human Respirovirus 3 Fusion Protein Bound to Camelid Nanobodies 4C03 and 4C06
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human respirovirus 3; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-11-30
Authors: Johnson, N.V., Ramamohan, A.R., McLellan, J.S.
PDB entry 8v5l: Structure of the Varicella Zoster Virus (VZV) gI binding domain of glycoprotein E (gE) in complex with human Fab 1A2 and 1E12
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human alphaherpesvirus 3
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2023-11-30
Authors: Seraj, N., Holzapfel, G., Harshbarger, W.
PDB entry 8v5m: Tetramer core subcomplex (conformation 1) of Xenopus laevis DNA polymerase alpha-primase
Classification: REPLICATION, TRANSFERASE
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.22 Å
Deposited: 2023-11-30
Authors: Mullins, E.A., Chazin, W.J., Eichman, B.F.
PDB entry 8v5n: Tetramer core subcomplex (conformation 2) of Xenopus laevis DNA polymerase alpha-primase
Classification: REPLICATION, TRANSFERASE
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.56 Å
Deposited: 2023-11-30
Authors: Mullins, E.A., Chazin, W.J., Eichman, B.F.
PDB entry 8v5o: Tetramer core subcomplex (conformation 3) of Xenopus laevis DNA polymerase alpha-primase
Classification: REPLICATION, TRANSFERASE
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.99 Å
Deposited: 2023-11-30
Authors: Mullins, E.A., Chazin, W.J., Eichman, B.F.
PDB entry 8v5p: Crystal Structure of the C-terminal domain of the VZV gE ectodomain in complex with the Fab of human antibody 5A2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human alphaherpesvirus 3
Experimental method: X-RAY DIFFRACTION
Resolution: 4.33 Å
Deposited: 2023-11-30
Authors: Harshbarger, W., Malito, E.
PDB entry 8v5q: Varicella Zoster Virus (VZV) glycoprotein E (gE) gI binding domain in complex with human Fab 1E3
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human alphaherpesvirus 3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-11-30
Authors: Holzapfel, G., Seraj, N., Harshbarger, W.
PDB entry 8v5r: Active conformation of DNA polymerase gamma bound to DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-11-30
Authors: Riccio, A.A., Krahn, J.M., Bouvette, J., Borgnia, J.M., Copeland, W.C.
PDB entry 8v5s: VZV glycoprotein E C-terminal domain (cleaved) in complex with human Fab 5A2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human alphaherpesvirus 3
Experimental method: X-RAY DIFFRACTION
Resolution: 3.53 Å
Deposited: 2023-11-30
Authors: Harshbarger, W., Malito, E.
PDB entry 8v5t: Crystal structure of Alzheimers disease phospholipase D3
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-12-01
Authors: Ishii, K., Hermans, S.J., Nero, T.L., Gorman, M.A., Parker, M.W.
PDB entry 8v5u: Human SIRT3 bound to p53-AMC peptide and Honokiol
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2023-12-01
Authors: Chakrabarti, R., Ghosh, A., Guan, X., Upadhyay, A., Dumpati, R.K., Munshi, S., Roy, S., Chall, S., Rahnamoun, A., Reverdy, C., Errasti, G., Delacroix, T.
PDB entry 8v5v: Structure of a SARS-CoV-2 spike S2 subunit in a pre-fusion, open conformation
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-12-01
Authors: Olmedillas, E., Diaz, R., Hastie, K., Ollmann-Saphire, E.
PDB entry 8v5w: UIC-1 mutant UIC-1-B5T
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2023-12-01
Authors: Heinz-Kunert, S.L.
PDB entry 8v5x: UIC-1 mutant - UIC-1-L6A
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2023-12-01
Authors: Heinz-Kunert, S.L.
PDB entry 8v5y: Crystal structure of Tyr p 36.0101 in complex with a poly(L-proline) peptide
Classification: ALLERGEN
Source organism: Tyrophagus putrescentiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.059 Å
Deposited: 2023-12-01
Authors: O'Malley, A., Chruszcz, M.
PDB entry 8v5z: UIC-1 mutant - UIC-1-L6M
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.84 Å
Deposited: 2023-12-01
Authors: Heinz-Kunert, S.L.
PDB entry 8v60: F315A mutant of human Slo1 in presence of EDTA - resting VSD
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2023-12-01
Authors: Pal, K., Kallure, G., Chowdhury, S.
PDB entry 8v61: UIC-1 mutant - UIC-1-L6I
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2023-12-01
Authors: Heinz-Kunert, S.L.
PDB entry 8v62: Structure of the Human Respirovirus 3 Fusion Protein Bound to Camelid Nanobodies 1D10 and 4C06
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human respirovirus 3; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-12-01
Authors: Johnson, N.J., Ramamohan, A.R., McLellan, J.S.
PDB entry 8v63: R207A mutant of human Slo1 in presence of EDTA - activated VSD
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-12-01
Authors: Pal, K., Kallure, G.S., Chowdhury, S.
PDB entry 8v64: RCK1-RCK2 double mutant of human Slo1 in presence of EDTA - resting VSD
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-12-01
Authors: Pal, K., Kallure, G.S., Chowdhury, S.
PDB entry 8v65: Nanorana parkeri saxiphilin:dcGTX2 (co-crystal)
Classification: ANTITOXIN
Source organism: Nanorana parkeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-12-01
Authors: Zakrzewska, S., Minor, D.L.
PDB entry 8v66: Nanorana parkeri saxiphilin:GTX5 (co-crystal)
Classification: ANTITOXIN
Source organism: Nanorana parkeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-12-01
Authors: Zakrzewska, S., Minor, D.L.
PDB entry 8v67: Nanorana parkeri saxiphilin:C1 (co-crystal)
Classification: ANTITOXIN
Source organism: Nanorana parkeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-12-01
Authors: Zakrzewska, S., Minor, D.L.
PDB entry 8v68: Nanorana parkeri saxiphilin:dcSTX (co-crystal)
Classification: ANTITOXIN
Source organism: Nanorana parkeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-12-01
Authors: Zakrzewska, S., Minor, D.L.
PDB entry 8v69: Nanorana parkeri saxiphilin:GTX2 (co-crystal)
Classification: ANTITOXIN
Source organism: Nanorana parkeri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-12-01
Authors: Zakrzewska, S., Minor, D.L.
PDB entry 8v6g: DNA initiation complex (configuration 1) of Xenopus laevis DNA polymerase alpha-primase
Classification: REPLICATION, TRANSFERASE
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.16 Å
Deposited: 2023-12-01
Authors: Mullins, E.A., Durie, C.L., Ohi, M.D., Chazin, W.J., Eichman, B.F.
PDB entry 8v6h: DNA initiation complex (configuration 2) of Xenopus laevis DNA polymerase alpha-primase
Classification: REPLICATION, TRANSFERASE/DNA/RNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.11 Å
Deposited: 2023-12-01
Authors: Mullins, E.A., Durie, C.L., Ohi, M.D., Chazin, W.J., Eichman, B.F.
PDB entry 8v6i: DNA elongation complex (configuration 1) of Xenopus laevis DNA polymerase alpha-primase
Classification: REPLICATION, TRANSFERASE/DNA/RNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 14.06 Å
Deposited: 2023-12-01
Authors: Mullins, E.A., Durie, C.L., Ohi, M.D., Chazin, W.J., Eichman, B.F.
PDB entry 8v6j: DNA elongation complex (configuration 2) of Xenopus laevis DNA polymerase alpha-primase
Classification: REPLICATION, TRANSFERASE/DNA/RNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.11 Å
Deposited: 2023-12-01
Authors: Mullins, E.A., Durie, C.L., Ohi, M.D., Chazin, W.J., Eichman, B.F.
PDB entry 8v6k: Apo-state cryo-EM structure of human TRPV3 in cNW30 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2023-12-01
Authors: Nadezhdin, K.D., Neuberger, A., Sobolevsky, A.I.
PDB entry 8v6l: Open-state cryo-EM structure of human TRPV3 in presence of tetrahydrocannabivarin (THCV) in cNW30 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2023-12-01
Authors: Nadezhdin, K.D., Neuberger, A., Sobolevsky, A.I.
PDB entry 8v6m: Inactivated-state cryo-EM structure of human TRPV3 in presence of tetrahydrocannabivarin (THCV) in cNW30 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2023-12-01
Authors: Nadezhdin, K.D., Neuberger, A., Sobolevsky, A.I.
PDB entry 8v6n: Open-state cryo-EM structure of human TRPV3 in presence of 2-APB in cNW30 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2023-12-01
Authors: Nadezhdin, K.D., Neuberger, A., Sobolevsky, A.I.
PDB entry 8v6o: Inactivated-state cryo-EM structure of human TRPV3 in presence of 2-APB in cNW30 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-12-01
Authors: Nadezhdin, K.D., Neuberger, A., Sobolevsky, A.I.
PDB entry 8v6p: Proteus vulgaris tryptophan indole-lyase complexed with 7-aza-L-tryptophan
Classification: LYASE
Source organism: Proteus vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2023-12-02
Authors: Phillips, R.S.
PDB entry 8v6q: Crystal structure of EcThsA in ligand-free state
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2023-12-02
Authors: Shi, Y., Masic, V., Mosaiab, T., Goulart, C.C., Hartley-Tassell, L., Sorbello, M., Vasquez, V., Mishra, B.P., Holt, S., Gu, W., Kobe, B., Ve, T.
PDB entry 8v6r: Crystal structure of EcThsA in complex with ADPR
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-12-02
Authors: Shi, Y., Masic, V., Mosaiab, T., Goulart, C.C., Hartley-Tassell, L., Sorbello, M., Vasquez, E., Mishra, B.P., Holt, S., Gu, W., Kobe, B., Ve, T.
PDB entry 8v6s: Crystal structure of PcThsA in complex with Imidazole Adenine Dinucleotide
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas corrugata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-12-02
Authors: Shi, Y., Masic, V., Mosaiab, T., Goulart, C.C., Hartley-Tassell, L., Sorbello, M., Vasquez, E., Mishra, B.P., Holt, S., Gu, W., Kobe, B., Ve, T.
PDB entry 8v6t: Crystal structure of EcThsB2
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-12-02
Authors: Shi, Y., Masic, V., Mosaiab, T., Goulart, C.C., Hartley-Tassell, L., Sorbello, M., Vasquez, E., Mishra, B.P., Holt, S., Gu, W., Kobe, B., Ve, T.
PDB entry 8v6u: 5HT2AR-miniGq heterotrimer in complex with a novel agonist obtained from large scale docking
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-12-03
Authors: Gumpper, R.H., Wang, L., Kapolka, N., Skiniotis, G., Roth, B.L.
PDB entry 8v6v: Cryo-EM structure of doubly-bound SNF2h-nucleosome complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-12-03
Authors: Chio, U.S., Palovcak, E., Armache, J.P., Narlikar, G.J., Cheng, Y.
PDB entry 8v6w: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 1
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v6x: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 2
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v6y: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 3
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v6z: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 4
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v70: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 6
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v71: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 7
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v72: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 8
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v73: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 9
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v74: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 10
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v75: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 11
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v76: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 15
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v77: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 12
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v78: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 13
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v79: Crystal structure of the core catalytic domain of human inositol phosphate multikinase in complex with compound 14
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-12-04
Authors: Wang, H., Shears, S.B.
PDB entry 8v7a: Human DNA polymerase eta-DNA-dT primer dCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-12-04
Authors: Chang, C., Gao, Y.
PDB entry 8v7b: Human DNA polymerase eta-DNA-dT primer araCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-12-04
Authors: Chang, C., Gao, Y.
PDB entry 8v7c: Human DNA polymerase eta-DNA-dT primer gemCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2023-12-04
Authors: Chang, C., Gao, Y.
PDB entry 8v7d: Human DNA polymerase eta-DNA-dT primer rCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-12-04
Authors: Chang, C., Gao, Y.
PDB entry 8v7e: Human DNA polymerase eta-DNA-araC-ended primer-dAMPNPP ternary complex with Mg2+
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-12-04
Authors: Chang, C., Gao, Y.
PDB entry 8v7f: Human DNA polymerase eta-DNA-araC-ended primer-dAMPNPP ternary complex with Mn2+
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-12-04
Authors: Chang, C., Gao, Y.
PDB entry 8v7g: Human DNA polymerase eta-DNA-gemC-ended primer-dAMPNPP ternary complex with Mg2+
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2023-12-04
Authors: Chang, C., Gao, Y.