LiteFold/PDB huggingface dataset:
PDB entry 2zby: Crystal structure of vitamin D hydroxylase cytochrome P450 105A1 (R84A mutant)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-10-30
Authors: Sugimoto, H., Shinkyo, R., Hayashi, K., Yoneda, S., Yamada, M., Kamakura, M., Ikushiro, S., Shiro, Y., Sakaki, T.
PDB entry 2zbz: Crystal structure of vitamin D hydroxylase cytochrome P450 105A1 (R84A mutant) in complex with 1,25-dihydroxyvitamin D3
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-10-30
Authors: Sugimoto, H., Shinkyo, R., Hayashi, K., Yoneda, S., Yamada, M., Kamakura, M., Ikushiro, S., Shiro, Y., Sakaki, T.
PDB entry 2zc0: Crystal structure of an archaeal alanine:glyoxylate aminotransferase
Classification: TRANSFERASE
Source organism: Thermococcus litoralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-10-31
Authors: Sakuraba, H., Yoneda, K., Tsuge, H., Ohshima, T.
PDB entry 2zc1: Organophosphorus Hydrolase from Deinococcus radiodurans
Classification: HYDROLASE
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-11-02
Authors: Larsen, S.D., Hawwa, R., Ratia, K., Santarsiero, B.D., Mesecar, A.D.
PDB entry 2zc2: Crystal structure of DnaD-like replication protein from Streptococcus mutans UA159, gi 24377835, residues 127-199
Classification: REPLICATION
Source organism: Streptococcus mutans UA159
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-11-02
Authors: Duke, N.E.C., Clancy, S., Duggan, E., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 2zc3: Penicillin-binding protein 2X (PBP 2X) acyl-enzyme complex (biapenem) from Streptococcus pneumoniae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-11-02
Authors: Yamada, M., Watanabe, T., Takeuchi, Y.
PDB entry 2zc4: Penicillin-binding protein 2X (PBP 2X) acyl-enzyme complex (tebipenem) from Streptococcus pneumoniae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2007-11-02
Authors: Yamada, M., Watanabe, T., Takeuchi, Y.
PDB entry 2zc5: Penicillin-binding protein 1A (PBP 1A) acyl-enzyme complex (biapenem) from Streptococcus pneumoniae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2007-11-02
Authors: Yamada, M., Watanabe, T., Takeuchi, Y.
PDB entry 2zc6: Penicillin-binding protein 1A (PBP 1A) acyl-enzyme complex (tebipenem) from Streptococcus pneumoniae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2007-11-02
Authors: Yamada, M., Watanabe, T., Takeuchi, Y.
PDB entry 2zc7: Crystal Structure of Class C beta-Lactamase ACT-1
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2007-11-02
Authors: Shimizu-Ibuka, A., Sakai, H., Galleni, M.
PDB entry 2zc8: Crystal structure of N-Acylamino Acid Racemase from Thermus thermophilus HB8
Classification: METAL BINDING PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2007-11-05
Authors: Hayashida, M., Kim, S.H., Takeda, K., Hisano, T., Miki, K.
PDB entry 2zc9: Thrombin in complex with Inhibitor
Classification: BLOOD CLOTTING/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2007-11-06
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zca: Crystal Structure of TTHB189, a CRISPR-associated protein, Cse2 family from Thermus thermophilus HB8
Classification: Structural Genomics, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-11-08
Authors: Agari, Y., Shinkai, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zcb: Crystal Structure of ubiquitin P37A/P38A
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-11-08
Authors: Kitahara, R., Tanaka, T., Sakata, E., Yamaguchi, Y., Kato, K., Yokoyama, S.
PDB entry 2zcc: Ubiquitin crystallized under high pressure
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2007-11-08
Authors: Kitahara, R., Tanaka, T., Yamashita, M., Araya, K., Yokoyama, S., Akasaka, K., Taniguchi, Y., Kato, M.
PDB entry 2zce: Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with pyrrolysine and an ATP analogue
Classification: LIGASE
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-11-08
Authors: Yanagisawa, T., Ishii, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zcf: Mutational study on Alpha-Gln90 of Fe-type nitrile hydratase from Rhodococcus sp. N771
Classification: LYASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2007-11-08
Authors: Takarada, H., Kawano, Y., Hashimoto, K., Nakayama, H., Ueda, S., Yohda, M., Kamiya, N., Dohmae, N., Maeda, M., Odaka, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zcg: Structure and inhibition of orotidine 5'-phosphate decarboxylase from plasmodium falciparum
Classification: LYASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.223 Å
Deposited: 2007-11-08
Authors: Langley, D.B., Guss, J.M., Shojaei, M., Christopherson, R.I.
PDB entry 2zch: Crystal structure of human prostate specific antigen complexed with an activating antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2007-11-08
Authors: Menez, R., Stura, E., Jolivet-Reynaud, C.
PDB entry 2zci: Structure of a GTP-dependent bacterial PEP-carboxykinase from Corynebacterium glutamicum
Classification: SIGNALING PROTEIN, LYASE
Source organism: Corynebacterium glutamicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-11-09
Authors: Aich, S., Prasad, L., Delbaere, L.T.J.
PDB entry 2zcj: Ternary structure of the Glu119Gln M.HhaI, C5-Cytosine DNA methyltransferase, with unmodified DNA and AdoHcy
Classification: TRANSFERASE/DNA
Source organism: Haemophilus parahaemolyticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2007-11-09
Authors: Shieh, F.K., Reich, N.O.
PDB entry 2zck: Crystal structure of a ternary complex between PSA, a substrat-acyl intermediate and an activating antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2007-11-09
Authors: Menez, R., Stura, E., Jolivet-Reynaud, C.
PDB entry 2zcl: Crystal structure of human prostate specific antigen complexed with an activating antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2007-11-09
Authors: Menez, R., Stura, E., Jolivet-Reynaud, C.
PDB entry 2zcm: Crystal structure of IcaR, a repressor of the TetR family
Classification: TRANSCRIPTION
Source organism: Staphylococcus epidermidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2007-11-10
Authors: Jeng, W.Y., Ko, T.P., Liu, C.I., Guo, R.T., Shr, H.L., Wang, A.H.J.
PDB entry 2zcn: Crystal structure of IcaR, a repressor of the TetR family
Classification: TRANSCRIPTION
Source organism: Staphylococcus epidermidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-11-10
Authors: Jeng, W.Y., Ko, T.P., Liu, C.I., Guo, R.T., Liu, C.L., Wang, A.H.J.
PDB entry 2zco: Crystal structure of the C(30) carotenoid dehydrosqualene synthase from Staphylococcus aureus
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2007-11-11
Authors: Liu, C.I., Jeng, W.Y., Wang, A.H., Oldfield, E.
PDB entry 2zcq: Crystal structure of the C(30) carotenoid dehydrosqualene synthase from Staphylococcus aureus complexed with bisphosphonate BPH-652
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2007-11-11
Authors: Liu, C.I., Jeng, W.Y., Wang, A.H., Oldfield, E.
PDB entry 2zcr: Crystal structure of the C(30) carotenoid dehydrosqualene synthase from Staphylococcus aureus complexed with bisphosphonate BPH-698
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2007-11-11
Authors: Liu, C.I., Jeng, W.Y., Wang, A.H., Oldfield, E.
PDB entry 2zcs: Crystal structure of the C(30) carotenoid dehydrosqualene synthase from Staphylococcus aureus complexed with bisphosphonate BPH-700
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2007-11-11
Authors: Liu, C.I., Jeng, W.Y., Wang, A.H., Oldfield, E.
PDB entry 2zct: Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Classification: OXIDOREDUCTASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-11-12
Authors: Nakamura, T., Hagihara, Y., Abe, M., Inoue, T., Yamamoto, T., Matsumura, H.
PDB entry 2zcu: Crystal structure of a new type of NADPH-dependent quinone oxidoreductase (QOR2) from escherichia coli
Classification: OXIDOREDUCTASE
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-11-13
Authors: Kim, I.K., Yim, H.S., Kim, M.K., Kim, D.W., Kim, Y.M., Cha, S.S., Kang, S.O.
PDB entry 2zcv: Crystal structure of NADPH-dependent quinone oxidoreductase QOR2 complexed with NADPH from escherichia coli
Classification: OXIDOREDUCTASE
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-11-13
Authors: Kim, I.K., Yim, H.S., Kim, M.K., Kim, D.W., Kim, Y.M., Cha, S.S., Kang, S.O.
PDB entry 2zcw: Crystal Structure of TTHA1359, a Transcriptional Regulator, CRP/FNR family from Thermus thermophilus HB8
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2007-11-13
Authors: Agari, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zcx: Crystal structure of TetR family transcriptional regulator SCO7815
Classification: TRANSCRIPTION
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2007-11-13
Authors: Okada, U., Kondo, K., Yao, M., Watanabe, N., Tanaka, I.
PDB entry 2zcy: yeast 20S proteasome:syringolin A-complex
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2007-11-15
Authors: Groll, M., Dudler, R., Kaiser, M.
PDB entry 2zcz: Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP)
Classification: RNA BINDING PROTEIN
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-11-15
Authors: Watanabe, M., Mishima, Y., Yamashita, I., Park, S.Y., Tame, J.R.H., Heddle, J.G.
PDB entry 2zd0: Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP)
Classification: RNA BINDING PROTEIN
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-11-15
Authors: Watanabe, M., Mishima, Y., Yamashita, I., Park, S.Y., Tame, J.R.H., Heddle, J.G.
PDB entry 2zd1: Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with TMC278 (Rilpivirine), A Non-nucleoside RT Inhibitor
Classification: TRANSFERASE, HYDROLASE/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-11-16
Authors: Das, K., Bauman, J.D., Clark Jr., A.D., Shatkin, A.J., Arnold, E.
PDB entry 2zd2: D202K mutant of P. denitrificans Atp12p
Classification: CHAPERONE
Source organism: Paracoccus denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-11-19
Authors: Gatti, D.L., Ludlam, A., Brunzelle, J., Ackerman, S.H.
PDB entry 2zd7: The structure of VPS75 (Vacuolar protein sorting-associated protein 75)
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-11-20
Authors: Park, Y.J., Luger, K.
PDB entry 2zd8: SHV-1 class A beta-lactamase complexed with meropenem
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2007-11-20
Authors: Nukaga, M., Knox, J.R., Hujer, A., Bonomo, R.A.
PDB entry 2zd9: Structure of a Bacterial Cyclic-Nucleotide Regulated Ion Channel
Classification: MEMBRANE PROTEIN
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2007-11-21
Authors: Clayton, G.M., Cabral-Morais, J.M.
PDB entry 2zda: Exploring Thrombin S1 pocket
Classification: Blood Clotting/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2007-11-21
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zdc: Crystal structure of dUTPase from Sulfolobus tokodaii
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-11-21
Authors: Kanagawa, M., Baba S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zdg: Crystal structure of D-Alanine:D-Alanine Ligase with ADP from Thermus thermophius HB8
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-11-22
Authors: Kitamura, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zdh: Crystal structure of D-Alanine:D-Alanine Ligase with ADP and D-Alanine from Thermus thermophius HB8
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-11-22
Authors: Kitamuta, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zdi: Crystal structure of Prefoldin from Pyrococcus horikoshii OT3
Classification: CHAPERONE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2007-11-23
Authors: Kida, H., Miki, K.
PDB entry 2zdj: Crystal Structure of TTMA177, a Hypothetical Protein from Thermus thermophilus phage TMA
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus phage TMA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-11-26
Authors: Agari, Y., Tamakoshi, M., Yamagishi, A., Shinkai, A., Ebihara, A., Yokoyama, S., Kuramitsu, S., Oshima, T., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zdk: Exploring Trypsin S3 Pocket
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2007-11-26
Authors: Baum, B., Brandt, T., Heine, A., Klebe, G.
PDB entry 2zdl: Exploring trypsin S3 pocket
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-11-26
Authors: Baum, B., Brandt, T., Heine, A., Klebe, G.
PDB entry 2zdm: Exploring trypsin S3 pocket
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2007-11-26
Authors: Baum, B., Brandt, T., Heine, A., Klebe, G.
PDB entry 2zdn: Exploring trypsin S3 pocket
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2007-11-26
Authors: Baum, B., Brandt, T., Heine, A., Klebe, G.
PDB entry 2zdo: Crystal structure of IsdG-N7A in complex with hemin
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-11-27
Authors: Lee, W.C., Reniere, M.L., Skaar, E.P., Murphy, M.E.P.
PDB entry 2zdp: Crystal structure of IsdI in complex with Cobalt protoporphyrin IX
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2007-11-27
Authors: Lee, W.C., Reniere, M.L., Skaar, E.P., Murphy, M.E.P.
PDB entry 2zdq: Crystal structure of D-Alanine:D-Alanine Ligase with ATP and D-Alanine:D-Alanine from Thermus thermophius HB8
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-11-27
Authors: Kitamuta, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zds: Crystal Structure of SCO6571 from Streptomyces coelicolor A3(2)
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-11-27
Authors: Begum, P., Gao, Y.G., Sakai, N., Yao, M., Watanabe, N., Tanaka, I.
PDB entry 2zdt: Crystal Structure of human JNK3 complexed with an isoquinolone inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-11-27
Authors: Sogabe, S., Asano, Y., Fukumoto, S., Habuka, N., Fujishima, A.
PDB entry 2zdu: Crystal Structure of human JNK3 complexed with an isoquinolone inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-11-27
Authors: Sogabe, S., Ohra, T., Itoh, F., Habuka, N., Fujishima, A.
PDB entry 2zdv: Exploring Thrombin S1 pocket
Classification: Blood Clotting/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2007-11-29
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zdx: Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2007-11-30
Authors: Kawamoto, M., Shiromizu, I., Kukimoto-niino, M., Tokmakov, A., Terada, T., Shirouzu, M., Matsusue, T., Yokoyama, S.
PDB entry 2zdy: Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2007-12-01
Authors: Kawamoto, M., Shiromizu, I., Kukimoto-Niino, M., Tokmakov, A., Terada, T., Shirouzu, M., Matsusue, T., Yokoyama, S.
PDB entry 2zdz: X-ray structure of Bace-1 in complex with compound 3.b.10
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-12-04
Authors: Chopra, R., Olland, A.
PDB entry 2ze0: Alpha-glucosidase GSJ
Classification: HYDROLASE
Source organism: Geobacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-12-04
Authors: Shirai, T., Hung, V.S., Morinaka, K., Kobayashi, T., Ito, S.
PDB entry 2ze1: X-ray structure of Bace-1 in complex with compound 6g
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-12-05
Authors: Chopra, R., Olland, A.
PDB entry 2ze2: Crystal structure of L100I/K103N mutant HIV-1 reverse transcriptase (RT) in complex with TMC278 (rilpivirine), a non-nucleoside RT inhibitor
Classification: TRANSFERASE, HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2007-12-05
Authors: Das, K., Bauman, J.D., Clark Jr., A.D., Shatkin, A.J., Arnold, E.
PDB entry 2ze3: Crystal Structure of DFA0005 Complexed with alpha-Ketoglutarate: A Novel Member of the ICL/PEPM Superfamily from Alkali-tolerant Deinococcus ficus
Classification: ISOMERASE
Source organism: Deinococcus ficus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2007-12-05
Authors: Liao, C.J., Chin, K.H., Chou, S.H.
PDB entry 2ze4: Crystal structure of phospholipase D from streptomyces antibioticus
Classification: HYDROLASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-12-05
Authors: Suzuki, A., Kakuno, K., Saito, R., Iwasaki, Y., Yamane, T., Yamane, T.
PDB entry 2ze5: Crystal Structure of adenosine phosphate-isopentenyltransferase
Classification: TRANSFERASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2007-12-06
Authors: Sakakibara, H.
PDB entry 2ze6: Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with substrate analog, DMASPP
Classification: TRANSFERASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-12-06
Authors: Sakakibara, H.
PDB entry 2ze7: Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with zinc ion and substrate analog, DMASPP
Classification: TRANSFERASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-12-06
Authors: Sakakibara, H.
PDB entry 2ze8: Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with diphosphate
Classification: TRANSFERASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2007-12-06
Authors: Sakakibara, H.
PDB entry 2ze9: Crystal structure of H168A mutant of phospholipase D from Streptomyces antibioticus, as a complex with phosphatidylcholine
Classification: HYDROLASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-12-06
Authors: Suzuki, A., Toda, H., Iwasaki, Y., Yamane, T., Yamane, T.
PDB entry 2zeb: Potent, Nonpeptide Inhibitors of Human Mast Cell Tryptase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-12-08
Authors: Spurlino, J.C., Lewandowski, F., Milligan, C.
PDB entry 2zec: Potent, Nonpeptide Inhibitors of Human Mast Cell Tryptase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.059 Å
Deposited: 2007-12-08
Authors: Spurlino, J.C., Lewandowski, F., Milligan, C.
PDB entry 2zed: Crystal structure of the human glutaminyl cyclase mutant S160A at 1.7 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-12-12
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zee: Crystal structure of the human glutaminyl cyclase mutant S160G at 1.99 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2007-12-12
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zef: Crystal structure of the human glutaminyl cyclase mutant E201D at 1.67 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2007-12-12
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zeg: Crystal structure of the human glutaminyl cyclase mutant E201L at 2.08 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2007-12-12
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zeh: Crystal structure of the human glutaminyl cyclase mutant E201Q at 1.8 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-12-12
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zej: Structure of the ROC domain from the Parkinson's disease-associated leucine-rich repeat kinase 2 reveals a dimeric GTPase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-12-13
Authors: Deng, J.
PDB entry 2zel: Crystal structure of the human glutaminyl cyclase mutant D248A at 1.97 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2007-12-13
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zem: Crystal structure of the human glutaminyl cyclase mutant D248Q at 2.18 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2007-12-13
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zen: Crystal structure of the human glutaminyl cyclase mutant D305A at 1.78 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2007-12-13
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zeo: Crystal structure of the human glutaminyl cyclase mutant D305E at 1.66 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2007-12-13
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zep: Crystal structure of the human glutaminyl cyclase mutant H319L at 2.1 angstrom resolution
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-12-13
Authors: Huang, K.F., Wang, Y.R., Chang, E.C., Chou, T.L., Wang, A.H.
PDB entry 2zeq: Crystal structure of ubiquitin-like domain of murine Parkin
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2007-12-14
Authors: Tomoo, K.
PDB entry 2zet: Crystal structure of the small GTPase Rab27B complexed with the Slp homology domain of Slac2-a/melanophilin
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2007-12-17
Authors: Kukimoto-Niino, M., Sakamoto, A., Kanno, E., Hanawa-Suetsugu, K., Terada, T., Shirouzu, M., Fukuda, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zeu: S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase in Complex with BPH-715
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-12-17
Authors: Guo, R.T., Chen, C.K.-M., Cao, R., Oldfield, E., Wang, A.H.-J.
PDB entry 2zev: S. Cerevisiae Geranylgeranyl Pyrophosphate Synthase in Complex with Magnesium, IPP and BPH-715
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2007-12-17
Authors: Guo, R.T., Chen, C.K.-M., Cao, R., Oldfield, E., Wang, A.H.-J.
PDB entry 2zew: Family 16 Cabohydrate Binding Domain Module 1
Classification: HYDROLASE
Source organism: Thermoanaerobacterium polysaccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2007-12-18
Authors: Bae, B., Nair, S.K.
PDB entry 2zex: Family 16 carbohydrate binding module
Classification: HYDROLASE
Source organism: Thermoanaerobacterium polysaccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2007-12-18
Authors: Bae, B., Nair, S.K.
PDB entry 2zey: Family 16 carbohydrate binding module
Classification: HYDROLASE
Source organism: Thermoanaerobacterium polysaccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-12-18
Authors: Nair, S.K., Bae, B.
PDB entry 2zez: Family 16 Carbohydrate Binding Module-2
Classification: HYDROLASE
Source organism: Thermoanaerobacterium polysaccharolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-12-18
Authors: Bae, B., Nair, S.K.
PDB entry 2zf0: Exploring Thrombin S1 Pocket
Classification: BLOOD CLOTTING/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-12-18
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zf3: Crystal Structure of VioE
Classification: ANTIBIOTIC
Source organism: Chromobacterium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-12-20
Authors: Hirano, S., Shiro, Y., Nagano, S.
PDB entry 2zf4: Crystal Structure of VioE complexed with phenylpyruvic acid
Classification: ANTIBIOTIC
Source organism: Chromobacterium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2007-12-20
Authors: Hirano, S., Shiro, Y., Nagano, S.
PDB entry 2zf5: Crystal Structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2007-12-20
Authors: Koga, Y., Katsumi, R., You, D.-J., Matsumura, H., Takano, K., Kanaya, S.
PDB entry 2zf8: Crystal structure of MotY
Classification: STRUCTURAL PROTEIN
Source organism: Vibrio alginolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2007-12-25
Authors: Imada, K., Kojima, S., Namba, K., Homma, M.
PDB entry 2zf9: Crystal structure of a type III cohesin module from the cellulosomal ScaE cell-surface anchoring scaffoldin of Ruminococcus flavefaciens
Classification: STRUCTURAL PROTEIN
Source organism: Ruminococcus flavefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2007-12-26
Authors: Frolow, F., Bayer, E., Alber, O.
PDB entry 2zfa: Structure of Lactate Oxidase at pH4.5 from AEROCOCCUS VIRIDANS
Classification: OXIDOREDUCTASE
Source organism: Aerococcus viridans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2007-12-26
Authors: Furuichi, M., Balasundaresan, D., Suzuki, N., Yoshida, Y., Minagawa, H., Kaneko, H., Waga, I., Kumar, P.K.R., Mizuno, H.
PDB entry 2zfb: Crystal structure of parrot hemoglobin (Psittacula krameri) at pH 7.5
Classification: METAL BINDING PROTEIN
Source organism: Psittacula krameri
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2007-12-28
Authors: Jaimohan, S.M., Naresh, M.D., Mandal, A.B.
PDB entry 2zfc: X-ray crystal structure of an engineered N-terminal HIV-1 GP41 trimer with enhanced stability and potency
Classification: VIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2007-12-29
Authors: Dwyer, J.J., Wilson, K.L., Martin, K., Seedorff, J.E., Hasan, A., Kim, H.
PDB entry 2zfd: The crystal structure of plant specific calcium binding protein AtCBL2 in complex with the regulatory domain of AtCIPK14
Classification: SIGNALING PROTEIN/TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2007-12-29
Authors: Akaboshi, M., Hashimoto, H., Ishida, H., Koizumi, N., Sato, M., Shimizu, T.
PDB entry 2zfe: Crystal structure of bacteriorhodopsin-xenon complex
Classification: PROTON TRANSPORT
Source organism: Halobacterium salinarium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-12-31
Authors: Kouyama, T.
PDB entry 2zff: Exploring Thrombin S1-pocket
Classification: Blood Clotting/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2008-01-04
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zfg: Structure of OMPF PORIN
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2008-01-04
Authors: Cramer, W.A., Zakharov, S.D., Yamashita, E.
PDB entry 2zfh: Crystal structure of putative CutA1 from Homo sapiens at 2.05A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-01-07
Authors: Bagautdinov, B., Yutani, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zfi: Crystal Structure of the Kif1A Motor Domain Before Mg Release
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-01-07
Authors: Nitta, R., Okada, Y., Hirokawa, N.
PDB entry 2zfj: Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-1
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-01-08
Authors: Nitta, R., Okada, Y., Hirokawa, N.
PDB entry 2zfk: Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-2
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.61 Å
Deposited: 2008-01-08
Authors: Nitta, R., Okada, Y., Hirokawa, N.
PDB entry 2zfl: Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-3
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-01-08
Authors: Nitta, R., Okada, Y., Hirokawa, N.
PDB entry 2zfm: Crystal Structure of the Kif1A Motor Domain After Mg Release
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2008-01-08
Authors: Nitta, R., Okada, Y., Hirokawa, N.
PDB entry 2zfn: Self-acetylation mediated histone H3 lysine 56 acetylation by rtt109
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-01-08
Authors: Yuan, Y.A.
PDB entry 2zfo: Structure of the partially unliganded met state of 400 kDa hemoglobin: Insights into ligand-induced structural changes of giant hemoglobins
Classification: OXYGEN BINDING, TRANSPORT PROTEIN
Source organism: Oligobrachia mashikoi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-01-08
Authors: Numoto, N., Nakagawa, T., Kita, A., Sasayama, Y., Fukumori, Y., Miki, K.
PDB entry 2zfp: Thrombin Inibition
Classification: Blood Clotting/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-01-08
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zfq: Exploring thrombin S3 pocket
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-01-10
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zfr: Exploring thrombin S3 pocket
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-01-10
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zfs: Exploring trypsin S3 pocket
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2008-01-10
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zft: Exploring trypsin S3 pocket
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2008-01-11
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zfu: Structure of the methyltransferase-like domain of nucleomethylin
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-01-14
Authors: Minami, H., Hashimoto, H., Murayama, A., Yanagisawa, J., Sato, M., Shimizu, T.
PDB entry 2zfw: Crystal structure of Pex from Synechococcus sp. (strain PCC 7942) (Anacystis nidulans R2)
Classification: CIRCADIAN CLOCK PROTEIN
Source organism: Synechococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-01-14
Authors: Kouyama, T.
PDB entry 2zfx: Crystal structure of the rat vitamin D receptor ligand binding domain complexed with YR301 and a synthetic peptide containing the NR2 box of DRIP 205
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2008-01-15
Authors: Kakuda, S., Takimoto-Kamimura, M.
PDB entry 2zfy: Crystal structure of human Otubain 1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2008-01-16
Authors: Akutsu, M., Walker, J.R., Li, Y., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 2zfz: Crystal structure of the C-terminal domain hexamer of ArgR from Mycobacterium tuberculosis in complex with arginine
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-01-16
Authors: Cherney, L.T., Cherney, M.M., Garen, C.R., Lu, G.J., James, M.N.G., TB Structural Genomics Consortium (TBSGC)
PDB entry 2zg0: Exploring thrombin S3 pocket
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-01-16
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zg1: Crystal Structure of Two N-terminal Domains of Siglec-5 in Complex with 6'-Sialyllactose
Classification: IMMUNE SYSTEM/CARBOHYDRATE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-01-17
Authors: Zhuravleva, M.A., Sun, P.D.
PDB entry 2zg2: Crystal Structure of Two N-terminal Domains of Native Siglec-5
Classification: IMMUNE SYSTEM/CARBOHYDRATE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2008-01-17
Authors: Zhuravleva, M.A., Sun, P.D.
PDB entry 2zg3: Crystal Structure of Two N-terminal Domains of Native Siglec-5 in Complex with 3'-Sialyllactose
Classification: IMMUNE SYSTEM/CARBOHYDRATE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-01-17
Authors: Zhuravleva, M.A., Sun, P.D.
PDB entry 2zg6: Crystal structure of Hypothetical protein; probable 2-haloalkanoic acid dehalogenase from Sulfolobus tokodaii
Classification: HYDROLASE
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-01-18
Authors: Padmanabhan, B., Bessho, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zg7: Crystal Structure of Pd(allyl)/apo-Fr
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-01-18
Authors: Abe, S., Niemeyer, J., Abe, M., Ueno, T., Hikage, T., Erker, G., Watanabe, Y.
PDB entry 2zg8: Crystal Structure of Pd(allyl)/apo-H49AFr
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-01-18
Authors: Abe, S., Niemeyer, J., Abe, M., Ueno, T., Hikage, T., Erker, G., Watanabe, Y.
PDB entry 2zg9: Crystal Structure of Pd(allyl)/apo-H114AFr
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-01-18
Authors: Abe, S., Niemeyer, J., Abe, M., Ueno, T., Hikage, T., Erker, G., Watanabe, Y.
PDB entry 2zga: HIV-1 protease in complex with a dimethylallyl decorated pyrrolidine based inhibitor (hexagonal space group)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-01-21
Authors: Boettcher, J., Blum, A., Heine, A., Diederich, W.E., Klebe, G.
PDB entry 2zgb: Thrombin Inhibition
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-01-21
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zgc: Crystal Structure of Active Human Granzyme M
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2008-01-21
Authors: Wu, L.F., Wang, L., Hua, G.Q., Liu, K., Zhai, Y.J., Sun, F., Fan, Z.S.
PDB entry 2zgd: Asn-hydroxylation stabilises the ankyrin repeat domain fold
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-01-21
Authors: McDonough, M.A., Schofield, C.J.
PDB entry 2zgg: Asn-hydroxylation stabilises the ankyrin repeat domain fold
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-01-21
Authors: McDonough, M.A., Schofield, C.J.
PDB entry 2zgh: Crystal Structure of active granzyme M bound to its product
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2008-01-22
Authors: Wu, L.F., Wang, L., Hua, G.Q., Liu, K., Zhai, Y.J., Sun, F., Fan, Z.S.
PDB entry 2zgi: Crystal Structure of Putative 4-amino-4-deoxychorismate lyase
Classification: LYASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2008-01-22
Authors: Padmanabhan, B., Bessho, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zgj: Crystal Structure of D86N-GzmM Complexed with Its Optimal Synthesized Substrate
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-01-22
Authors: Wu, L.F., Wang, L., Hua, G.Q., Liu, K., Zhai, Y.J., Sun, F., Fan, Z.S.
PDB entry 2zgk: Crystal structure of wildtype AAL
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-01-23
Authors: Yang, N., Li, D.F., Wang, D.C.
PDB entry 2zgl: Crystal structure of recombinant Agrocybe aegerita (rAAL)
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-01-23
Authors: Yang, N., Li, D.F., Wang, D.C.
PDB entry 2zgm: Crystal structure of recombinant Agrocybe aegerita lectin,rAAL, complex with lactose
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-01-23
Authors: Li, D.F., Yang, N., Wang, D.C.
PDB entry 2zgn: crystal structure of recombinant Agrocybe aegerita lectin, rAAL, complex with galactose
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-01-23
Authors: Yang, N., Li, D.F., Wang, D.C.
PDB entry 2zgo: Crystal structure of AAL mutant H59Q complex with lactose
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-01-23
Authors: Li, D.F., Yang, N., Wang, D.C.
PDB entry 2zgp: Crystal structure of Agrocybe aegerita lectin AAL mutant I25G
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-01-23
Authors: Yang, N., Li, D.F., Wang, D.C.
PDB entry 2zgq: Crystal structure of AAL mutant L33A in P1 spacegroup
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-01-23
Authors: Li, D.F., Yang, N., Wang, D.C.
PDB entry 2zgr: Crystal structure of AAL mutant L33A in C2 spacegroup
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-01-23
Authors: Yang, N., Li, D.F., Wang, D.C.
PDB entry 2zgs: Crystal structure of Agrocybe aegerita lectin AAL mutant L47A
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-01-23
Authors: Li, D.F., Yang, N., Wang, D.C.
PDB entry 2zgt: Crystal structure of Agrocybe aegerita lectin AAL mutant F93G
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-01-23
Authors: Li, D.F., Yang, N., Wang, D.C.
PDB entry 2zgu: Crystal structure Agrocybe aegerita lectin AAL mutant I144G
Classification: HYDROLASE
Source organism: Agrocybe aegerita
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-01-23
Authors: Li, D.F., Yang, N., Wang, D.C.
PDB entry 2zgv: Crystal Structure of human phosphoglycerate kinase bound to D-ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-01-26
Authors: Arold, S.T., Gondeau, C., Lionne, C., Chaloin, L.
PDB entry 2zgw: Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Complexed with Adenosine and Biotin, Mutations R48A and K111A
Classification: LIGASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-01-28
Authors: Bagautdinov, B., Matsuura, Y., Bagautdinova, S., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zgx: Thrombin Inhibition
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-01-28
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zgy: PARM with GDP
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-01-30
Authors: Popp, D., Narita, A., Oda, T., Fujisawa, T., Matsuo, H., Nitanai, Y., Iwasa, M., Maeda, K., Onishi, H., Maeda, Y.
PDB entry 2zgz: PARM with GMPPNP
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-01-30
Authors: Popp, D., Narita, A., Oda, T., Fujisawa, T., Matsuo, H., Nitanai, Y., Iwasa, M., Maeda, K., Onishi, H., Maeda, Y.
PDB entry 2zh1: Complex structure of AFCCA with tRNAminiDA
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zh2: Complex structure of AFCCA with tRNAminiDAC
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zh3: Complex structure of AFCCA with tRNAminiDCA
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zh4: Complex structure of AFCCA with tRNAminiDCG
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.
PDB entry 2zh5: Complex structure of AFCCA with tRNAminiDCU
Classification: TRANSFERASE/RNA
Source organism: Archaeoglobus fulgidus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-02-01
Authors: Toh, Y., Tomita, K.