LiteFold/PDB huggingface dataset:
PDB entry 8vlh: Crystal structure of Ash1L PHD-BAH domains
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.403 Å
Deposited: 2024-01-11
Authors: Vann, K.R., Tencer, A.H., Kutateladze, T.G.
PDB entry 8vli: Cryo-EM structure of human HGSNAT bound with CoA and product analog
Classification: MEMBRANE PROTEIN,TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-11
Authors: Li, F., Zhao, B.
PDB entry 8vlj: Crystal structure of the cacodylate-bound yeast cytosine deaminase (closed form)
Classification: ANTIFUNGAL PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2024-01-11
Authors: Picard, M.-E., Grenier, J., Despres, P.C., Dube, A.K., Landry, C.R., Shi, R.
PDB entry 8vlk: Crystal structure of the yeast cytosine deaminase containing both open and closed active sites
Classification: ANTIFUNGAL PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-01-11
Authors: Picard, M.-E., Grenier, J., Despres, P.C., Dube, A.K., Landry, C.R., Shi, R.
PDB entry 8vll: Crystal structure of the yeast cytosine deaminase (yCD) M100W mutant
Classification: ANTIFUNGAL PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-01-11
Authors: Picard, M.-E., Grenier, J., Despres, P.C., Dube, A.K., Landry, C.R., Shi, R.
PDB entry 8vlm: Crystal structure of the yeast cytosine deaminase (yCD) E64V-M100W heterodimer
Classification: ANTIFUNGAL PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2024-01-11
Authors: Picard, M.-E., Grenier, G., Despres, P.C., Dube, A.K., Landry, C.R., Shi, R.
PDB entry 8vlo: Composite structure of human FASN with NADPH in State 2
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-11
Authors: Schultz, K., Marmorstein, R.
PDB entry 8vlp: Composite structure of human FASN with NADPH in State 3
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-11
Authors: Schultz, K., Marmorstein, R.
PDB entry 8vlq: Structure of PmHMGR bound to mevalonate, CoA and NAD 5 minutes after reaction initiation at pH 9
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas sp. 'mevalonii'
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-01-12
Authors: Purohit, V., Steussy, C.N., Stauffacher, C.V.
PDB entry 8vlr: Cryo-EM structure of native H2AK119bu nucleosome at 2.6
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-01-12
Authors: Wang, Y., Zhang, K.
PDB entry 8vls: Structure of VCP in complex with an ATPase activator (D2 domains only, dodecameric form)
Classification: HYDROLASE/ACTIVATOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-01-12
Authors: Jones, N.H., Urnivicius, L., Kapoor, T.M.
PDB entry 8vlt: Crystal structure of glycan-targeting antibody 2526 Fab bound to Mannose
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2024-01-12
Authors: Lindenberger, J., Acharya, P.
PDB entry 8vlu: Cryo-EM structure of human HGSNAT bound with CoA
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2024-01-12
Authors: Li, F., Zhao, B.
PDB entry 8vlv: Cryo-EM structure of human HGSNAT in inactive state
Classification: MEMBRANE PROTEIN,TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-01-12
Authors: Li, F.
PDB entry 8vlw: TolQ-TolR inner membrane protein complex from Acinetobacter baumannii
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2024-01-12
Authors: Guo, Y., Borek, D., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8vlx: HTT in complex with HAP40 and a small molecule.
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-01-12
Authors: Poweleit, N., Boudet, J., Doherty, E.
PDB entry 8vly: Cryo-EM structure of human HGSNAT in transition state
Classification: MEMBRANE PROTEIN,TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2024-01-12
Authors: Li, F., Zhao, B.
PDB entry 8vlz: CryoEM structure of human S-OPA1 assembled on lipid membrane containing brominated cardiolipin in membrane-adjacent state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.4 Å
Deposited: 2024-01-12
Authors: Zuccaro, K.E., Aydin, H.
PDB entry 8vm0: Composite structure of human FASN with NADPH in State 4
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-12
Authors: Schultz, K., Marmorstein, R.
PDB entry 8vm1: Structural Elucidation of the Mesothelin Mucin16 CA125 Interaction
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-01-12
Authors: Rupert, P.B., Strong, R.
PDB entry 8vm2: Crystal Structure of NRAS Q61K bound to GTP
Classification: HYDROLASE/ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2024-01-12
Authors: Gebregiworgis, T., Chan, J.Y.L., Kuntz, D.A., Prive, G.G., Marshall, C.B., Ikura, M.
PDB entry 8vm4: CryoEM structure of human S-OPA1 assembled on lipid membrane containing brominated cardiolipin in membrane-adjacent state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.4 Å
Deposited: 2024-01-12
Authors: Zuccaro, K.E., Aydin, H.
PDB entry 8vm5: Composite structure of human FASN with NADPH in State 5
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-12
Authors: Schultz, K., Marmorstein, R.
PDB entry 8vm6: Composite structure of human FASN with NADPH in State 8
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-01-13
Authors: Schultz, K., Marmorstein, R.
PDB entry 8vm7: Composite structure of human FASN with NADPH in State 7
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-13
Authors: Schultz, K., Marmorstein, R.
PDB entry 8vm8: The crystal structure of coxsackievirus B3 RNA replication element sD-loop mutant in complex with Fab BL3-6
Classification: RNA/Immune System
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-01-13
Authors: Das, N.K., Koirala, D.
PDB entry 8vm9: The crystal structure of rhinovirus B14 RNA replication element sD-loop mutant in complex with Fab BL3-6
Classification: RNA/Immune System
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-01-13
Authors: Das, N.K., Koirala, D.
PDB entry 8vma: The crystal structure of rhinovirus C15 RNA replication element sD-loop mutant in complex with Fab BL3-6
Classification: RNA/Immune System
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-01-13
Authors: Das, N.K., Koirala, D.
PDB entry 8vmb: The crystal structure of rhinovirus C15 RNA replication element sB-loop mutant in complex with Fab BL3-6
Classification: RNA/Immune System
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2024-01-13
Authors: Das, N.K., Koirala, D.
PDB entry 8vmc: Composite structure of human FASN with NADPH in State 6
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-13
Authors: Schultz, K., Marmorstein, R.
PDB entry 8vmd: Modifying portion of human FASN with NADP+ and the ACP at the DH domain
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2024-01-13
Authors: Schultz, K., Marmorstein, R.
PDB entry 8vme: Crystal structure of the GSK-3/Axin complex bound to a phosphorylated beta-catenin T41A peptide
Classification: TRANSFERASE/SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-01-13
Authors: Enos, M.D., Gavagan, M., Jameson, N., Zalatan, J.G., Weis, W.I.
PDB entry 8vmf: Crystal structure of a transition-state mimic of the GSK-3/Axin complex bound to a beta-catenin S45D peptide
Classification: TRANSFERASE/SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-01-13
Authors: Enos, M.D., Gavagan, M., Jameson, N., Zalatan, J.G., Weis, W.I.
PDB entry 8vmg: Crystal structure of GSK-3 26-383 bound to Axin 383-435
Classification: TRANSFERASE/SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-01-13
Authors: Enos, M.D., Gavagan, M., Jameson, N., Zalatan, J.G., Weis, W.I.
PDB entry 8vmh: A structural study of selectivity mechanisms for JNK3 and p38 alpha with indazole scaffold probing compounds
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2024-01-13
Authors: Park, H., Feng, Y.
PDB entry 8vmi: PRC2_AJ119-450 bound to H3K4me3
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-13
Authors: Cookis, T., Nogales, E.
PDB entry 8vmj: H3K4me3 nucleosome bound to PRC2_AJ119-450
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-13
Authors: Cookis, T., Nogales, E.
PDB entry 8vmk: A crystal structure of heme-dependent tyrosine hydroxylase complexed with a substrate analog, 3-(4-hydroxyphenyl)propionic acid
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Streptomyces sclerotialus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-01-13
Authors: Wang, Y., Traore, E., Liu, A.
PDB entry 8vml: PRC2_AJ1-450 bound to H3K4me3
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-01-13
Authors: Cookis, T., Nogales, E.
PDB entry 8vmm: A structural study of selectivity mechanisms for JNK3 and p38 alpha with indazole scaffold probing compounds
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-01-13
Authors: Park, H., Feng, Y.
PDB entry 8vmn: H3K4me3 nucleosome bound to PRC2_AJ1-450
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-01-13
Authors: Cookis, T., Nogales, E.
PDB entry 8vmo: Homing endonuclease I-PpoI-DNA complex:ground state at pH7.0 (K+ MES) with Na+
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmp: Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 10s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmq: Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 20s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmr: Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 40s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vms: Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 80s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmt: Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 160s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmu: Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 320s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmv: Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 600s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmw: Homing endonuclease I-PpoI-DNA complex:ground state at pH6.0 (K+ MES) with Na+
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmx: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 10s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmy: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 20s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vmz: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 40s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn0: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 80s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn1: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 160s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn2: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 320s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn3: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 600s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn4: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 1200s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn5: Homing endonuclease I-PpoI-DNA complex:ground state at pH8.0 (Tris) with Na+
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn6: Homing endonuclease I-PpoI-DNA complex:reaction at pH8.0 (Tris) with 500 uM Mg2+ for 10s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn7: Homing endonuclease I-PpoI-DNA complex:reaction at pH8.0 (Tris) with 500 uM Mg2+ for 20s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn8: Homing endonuclease I-PpoI-DNA complex:reaction at pH8.0 (Tris) with 500 uM Mg2+ for 40s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vn9: Homing endonuclease I-PpoI-DNA complex:reaction at pH8.0 (Tris) with 500 uM Mg2+ for 80s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vna: Homing endonuclease I-PpoI-DNA complex:reaction at pH8.0 (Tris) with 500 uM Mg2+ for 160s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnb: Homing endonuclease I-PpoI-DNA complex:reaction at pH8.0 (Tris) with 500 uM Mg2+ for 240s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnc: Homing endonuclease I-PpoI-DNA complex:reaction at pH8.0 (Tris) with 500 uM Mg2+ for 320s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnd: Homing endonuclease I-PpoI-DNA complex:reaction at pH8.0 (Tris) with 500 uM Mg2+ for 600s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vne: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 10s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnf: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 20s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vng: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 40s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnh: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 80s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vni: A ligand-free crystal structure of mercaptosuccinate dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Variovorax paradoxus B4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-01-13
Authors: Wang, Y., Ralls, H., Jordan, S.
PDB entry 8vnj: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 120s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnk: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 160s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnl: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 240s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnm: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 320s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnn: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 480s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vno: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 600s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnp: Homing endonuclease I-PpoI-DNA complex at pH6.0 (K+ MES) with 0.2 M sodium malonate
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnq: Homing endonuclease H98A I-PpoI-DNA complex at pH6.0 (K+ MES) with 1 mM Mn2+ for 1800s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnr: Homing endonuclease H98A I-PpoI-DNA complex at pH6.0 (K+ MES) with 1 mM Mn2+ for 600s and then 100 mM imidazole for 15 hrs
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vns: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 200 mM Mn2+ for 600s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnt: Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 1800s
Classification: HYDROLASE/DNA
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnu: Homing endonuclease H98A I-PpoI-DNA complex at pH6.0 (K+ MES) with 70 mM Tl+ for 1800s
Classification: HYDROLASE
Source organism: Physarum polycephalum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-01-13
Authors: Chang, C., Gao, Y.
PDB entry 8vnv: PRC2_AJ1-450 bound to H3K36me3 with histone H3 tail engaged
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-13
Authors: Cookis, T., Nogales, E.
PDB entry 8vnx: A structural study of selectivity mechanisms for JNK3 and p38 alpha with indazole scaffold probing compounds
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-01-13
Authors: Park, H., Feng, Y.
PDB entry 8vnz: PRC2_AJ1-450 bound to H3K36me3-modified nucleosome with histone H3 tail disengaged
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-01-14
Authors: Cookis, T., Nogales, E.
PDB entry 8vo0: H3K36me3-modified nucleosome bound to PRC2_AJ1-450 with histone H3 tail disengaged
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-14
Authors: Cookis, T., Nogales, E.
PDB entry 8vo1: Pathogenesis related 10-10 C155S mutant
Classification: PLANT PROTEIN
Source organism: Papaver somniferum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-01-14
Authors: Carr, S.C., Facchini, P.J., Ng, K.K.S.
PDB entry 8vo2: Pathogenesis related 10-10 C59S mutant
Classification: PLANT PROTEIN
Source organism: Papaver somniferum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-01-14
Authors: Carr, S.C., Facchini, P.J., Ng, K.K.S.
PDB entry 8vo3: Pathogenesis related 10-10 C59S mutant papaverine complex
Classification: PLANT PROTEIN
Source organism: Papaver somniferum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-01-14
Authors: Carr, S.C., Ng, K.K.S.
PDB entry 8vo4: A structural study of selectivity mechanisms for JNK3 and p38 alpha with indazole scaffold probing compounds
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-01-14
Authors: Park, H., Feng, Y.
PDB entry 8vo5: Cryo-EM structure of fascin bound to F-actin (actin binding site 1)
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-01-14
Authors: Gong, R., Reynolds, M.J., Alushin, G.M.
PDB entry 8vo6: Cryo-EM structure of fascin bound to F-actin (actin binding site 2)
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-14
Authors: Gong, R., Reynolds, M.J., Alushin, G.M.
PDB entry 8vo7: Cryo-EM structure of fascin crosslinked F-actin
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-14
Authors: Gong, R., Reynolds, M.J., Alushin, G.M.
PDB entry 8vo8: Cryo-EM structure of fascin crosslinked F-actin (Eigen_left)
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-01-14
Authors: Gong, R., Reynolds, M.J., Alushin, G.M.
PDB entry 8vo9: Cryo-EM structure of fascin crosslinked F-actin (Eigen_middle)
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-01-14
Authors: Gong, R., Reynolds, M.J., Alushin, G.M.
PDB entry 8voa: Cryo-EM structure of fascin crosslinked F-actin (Eigen_right)
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-01-14
Authors: Gong, R., Reynolds, M.J., Alushin, G.M.
PDB entry 8vob: H3K36me3-modified nucleosome bound to PRC2_AJ1-450
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-14
Authors: Cookis, T., Nogales, E.
PDB entry 8voc: The crystal structure of wild-type CYP199A4 bound to 4-trifluoromethoxybenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.544 Å
Deposited: 2024-01-15
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 8voe: The DNA 16-mer sequence 5'-GCTGGATTAATCCAGC-3' bound by a DB1992 stacked dimer
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-01-15
Authors: Terrell, J.R., Wilson, W.D.
PDB entry 8vof: GI targeted CpPI4K inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-01-15
Authors: Knapp, M.S., Cuellar, C., Mamo, M.
PDB entry 8vog: UIC-12-BIF extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.94 Å
Deposited: 2024-01-15
Authors: Ganatra, P.
PDB entry 8voh: HADDOCK models of human alphaM I-domain bound to the the N-terminal domain of the cytokine pleiotrophin
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-01-15
Authors: Wang, X., Nguyen, H.
PDB entry 8voi: HADDOCK models of active human alphaM I-domain bound to the the C-terminal domain of the cytokine pleiotrophin
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-01-15
Authors: Wang, X., Nguyen, H.
PDB entry 8voj: The Cryo-EM structure of LSD1-CoREST-HDAC1 in complex with KBTBD4 enhanced by UM171 and IP6
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2024-01-15
Authors: Xie, X., Mao, H., Liau, B., Zheng, N.
PDB entry 8vok: The crystal structure of wild-type CYP199A4 bound to 4-hydroxybenzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.538 Å
Deposited: 2024-01-15
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 8vol: Apex domain deletion mutant of bacteriophage P2 central spike protein, membrane-piercing module
Classification: VIRAL PROTEIN
Source organism: Bacteriophage P2
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2024-01-15
Authors: Leiman, P.G., Miller, J.M.
PDB entry 8vom: Double alanine Apex domain mutant of bacteriophage P2 central spike protein, membrane-piercing module
Classification: VIRAL PROTEIN
Source organism: Bacteriophage P2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-01-15
Authors: Leiman, P.G., Miller, J.M.
PDB entry 8von: Double phenylalanine Apex domain mutant of bacteriophage P2 central spike protein, membrane-piercing module
Classification: VIRAL PROTEIN
Source organism: Bacteriophage P2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2024-01-15
Authors: Leiman, P.G., Miller, J.M.
PDB entry 8voo: Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 39 nt long spacer, ops signal, RfaH, NusA, and fMet-tRNAs in E-site and P-site
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-01-15
Authors: Molodtsov, V., Wang, C., Ebright, R.H.
PDB entry 8vop: Escherichia coli transcription-translation coupled complex (TTC-B) containing mRNA with a 36 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2024-01-15
Authors: Molodtsov, V., Wang, C., Ebright, R.H.
PDB entry 8voq: Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.3 Å
Deposited: 2024-01-15
Authors: Molodtsov, V., Wang, C., Ebright, R.H.
PDB entry 8vor: Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 51 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-01-15
Authors: Molodtsov, V., Wang, C., Ebright, R.H.
PDB entry 8vos: Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 60 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
Classification: TRANSCRIPTION
Source organism: Escherichia coli; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2024-01-15
Authors: Molodtsov, V., Wang, C., Ebright, R.H.
PDB entry 8vot: The crystal structure of wild-type CYP199A4 bound to 4-(hydroxymethyl)benzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.529 Å
Deposited: 2024-01-16
Authors: Podgorski, M.N., Bell, S.G.
PDB entry 8vou: Human glutathione transferase M1-1 in complex with the adduct between glutathione and nitrooleic acid
Classification: TRANSFERASE/PRODUCT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-01-16
Authors: Larrieux, N., Steglich, M., Dalla Rizza, J., Buschiazzo, A., Turell, L.
PDB entry 8vov: Structure of VCP in complex with an ATPase activator and ADP (D2 domains only, hexameric form)
Classification: HYDROLASE/ACTIVATOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-01-16
Authors: Jones, N.H., Urnivicius, L., Kapoor, T.M.
PDB entry 8vow: Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with MgATP and Vi
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vox: Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with MgADP
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8voz: Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with MgADP and substrate
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vp1: Cryo-EM structure of the ABC transporter PCAT1 cysteine-free core bound with ATP
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vp3: Cryo-EM structure of the ABC transporter PCAT1 bound with MgADP and Substrate
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vp4: Crystal Structure of JF1cpCasp2 with Peptide Inhibitor AcVDVAD-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2024-01-16
Authors: Fuller, J.L., Shi, K., Walters, M.A., Finzel, B.C.
PDB entry 8vp5: Cryo-EM structure of the ABC transporter PCAT1 bound with ADP and Substrate
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vp6: Cryo-EM structure of the ABC transporter PCAT1 bound with Mg_class_2
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vp7: UIC-13-BIF-A4(Dab) extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2024-01-16
Authors: Ganatra, P.
PDB entry 8vp8: Cryo-EM structure of the ABC transporter PCAT1 bound with ATP and Substrate
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vp9: Cryo-EM structure of the cysteine-free ABC transporter PCAT1 bound with ADP and Substrate
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vpa: Cryo-EM structure of the ABC transporter PCAT1 bound with ADP
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vpb: Cryo-EM structure of the ABC transporter PCAT1 bound with MgADP_Class_2
Classification: TRANSPORT PROTEIN
Source organism: Acetivibrio thermocellus ATCC 27405
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-01-16
Authors: Zhang, R., Jagessar, K.L., Polasa, A., Brownd, M., Stein, R., Moradi, M., Karakas, E., Mchaourab, H.S.
PDB entry 8vpc: UIC-13-BIF extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.94 Å
Deposited: 2024-01-16
Authors: Ganatra, P.
PDB entry 8vpd: UIC-11-BIF extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-01-16
Authors: Ganatra, P.
PDB entry 8vpe: UIC-10-BIF extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.91 Å
Deposited: 2024-01-16
Authors: Ganatra, P.
PDB entry 8vpf: Structure of SARS-CoV spike in complex with CoV1-65 Fab (NTD-bound)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-01-16
Authors: Bangaru, S., Ward, A.B.
PDB entry 8vpg: CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Containing Quinoline-based SGI-1027 Analog 455
Classification: TRANSFERASE, DNA BINDING PROTEIN/DNA
Source organism: Clostridioides difficile; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2024-01-16
Authors: Zhou, J., Horton, J.R., Cheng, X.
PDB entry 8vph: CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Containing Quinoline-based SGI-1027 Analog 455 and Inhibitor MC4741
Classification: Transferase, DNA Binding Protein/DNA
Source organism: Clostridioides difficile; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å
Deposited: 2024-01-16
Authors: Zhou, J., Horton, J.R., Cheng, X.
PDB entry 8vpi: CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Containing Quinoline-based SGI-1027 Analog 462
Classification: TRANSFERASE, DNA BINDING PROTEIN/DNA
Source organism: Clostridioides difficile; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2024-01-16
Authors: Zhou, J., Horton, J.R., Cheng, X.
PDB entry 8vpj: UIC-11-BPE extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-01-16
Authors: Ganatra, P.
PDB entry 8vpk: Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-B-Ery
Classification: RIBOSOME
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2024-01-16
Authors: Majumdar, S., Koripella, R.K., Sharma, M.R., Manjari, S.R., Banavali, N.K., Agrawal, R.K.
PDB entry 8vpl: Glutaminyl cyclase ApgG, diamond shape
Classification: TRANSFERASE
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2024-01-16
Authors: Nie, Q., Chang, C., Gao, Y., Gao, X.
PDB entry 8vpm: Glutaminyl cyclase ApgG, rod shape
Classification: TRANSFERASE
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-01-16
Authors: Nie, Q., Chang, C., Gao, Y., Gao, X.
PDB entry 8vpn: Phosphorylated human NCC in complex with indapamide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-01-16
Authors: Zhao, Y.X., Cao, E.H.
PDB entry 8vpo: X-Ray Crystal Structure of TigE from Paramaledivibacter caminithermalis
Classification: OXIDOREDUCTASE
Source organism: Paramaledivibacter caminithermalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-01-16
Authors: Grove, T.L., Lachowicz, J.C., Zizola, C.
PDB entry 8vpp: Phosphorylated human NCC in complex with chlorthalidone
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-01-16
Authors: Zhao, Y.X., Cao, E.H.
PDB entry 8vpq: The structure of LSD1-CoREST-HDAC1 in complex with KBTBD4IPR310delinsTTYML
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-16
Authors: Xie, X., Liau, B., Zheng, N.
PDB entry 8vpr: Crystal structure of mouse Importin alpha in complex with Dengue 1 NS5 central NLS peptide
Classification: VIRAL PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-01-16
Authors: Cheng, C.X., Swarbrick, C.M.D., Forwood, J.K.
PDB entry 8vps: UIC-12-BPE extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2024-01-16
Authors: Ganatra, P.
PDB entry 8vpt: UIC-14-BPE extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 0.94 Å
Deposited: 2024-01-16
Authors: Ganatra, P.
PDB entry 8vpu: Crystal structure of mouse Importin alpha in complex with dengue virus 3 NS5 central NLS peptide
Classification: VIRAL PROTEIN
Source organism: dengue virus type 3; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-01-17
Authors: Roman, N., Swarbrick, C.M.D., Forwood, J.K.
PDB entry 8vpv: Class III PreQ1 riboswitch mutant delta84
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2024-01-17
Authors: Srivastava, Y., Jenkins, J.L., Wedekind, J.E.
PDB entry 8vpw: Pseudomonas fluorescens G150T isocyanide hydratase at 298 K XFEL data, free enzyme
Classification: LYASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-01-17
Authors: Wilson, M.A., Smith, N., Dasgupta, M., Dolamore, C.
PDB entry 8vpx: UIC-10-BPE extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.451 Å
Deposited: 2024-01-17
Authors: Ganatra, P.
PDB entry 8vpy: UIC-16-MER extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2024-01-17
Authors: Ganatra, P.
PDB entry 8vpz: UIC-1-BPE1MER mutation of UIC-1-cap
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2024-01-17
Authors: Ganatra, P.
PDB entry 8vq0: UIC-13-MER extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2024-01-17
Authors: Ganatra, P.
PDB entry 8vq1: Pseudomonas fluorescens G150T isocyanide hydratase at 298 K XFEL data, thioimidate intermediate
Classification: LYASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-01-17
Authors: Wilson, M.A., Smith, N., Dasgupta, M., Dolamore, C.
PDB entry 8vq2: HSV1 polymerase ternary complex with dsDNA and compound 44
Classification: TRANSFERASE
Source organism: Human alphaherpesvirus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.829 Å
Deposited: 2024-01-17
Authors: Hayes, R.P., Heo, M.R., Plotkin, M.
PDB entry 8vq3: CDK2-CyclinE1 in complex with allosteric inhibitor I-198.
Classification: CELL CYCLE/TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2024-01-17
Authors: Hirschi, M., Johnson, E., Zhang, Y., Liu, Z., Brodsky, O., Won, S.J., Nagata, A., Petroski, M.D., Majmudar, J.D., Niessen, S., VanArsdale, T., Gilbert, A.M., Hayward, M.M., Stewart, A.E., Nager, A.R., Melillo, B., Cravatt, B.
PDB entry 8vq4: CDK2-CyclinE1 in complex with allosteric inhibitor I-125A.
Classification: CELL CYCLE/TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-01-17
Authors: Hirschi, M., Johnson, E., Zhang, Y., Liu, Z., Brodsky, O., Won, S.J., Nagata, A., Petroski, M.D., Majmudar, J.D., Niessen, S., VanArsdale, T., Gilbert, A.M., Hayward, M.M., Stewart, A.E., Nager, A.R., Melillo, B., Cravatt, B.
PDB entry 8vq5: hCA-II-Bivalent compound bound complex EthylUreadibenzensulfonamide
Classification: LYASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-01-17
Authors: Ismail, M.M.
PDB entry 8vq6: hCA-II-4-(2-Aminoethyl)benzenesulfonamide-complex. Two molecules of inhibitor bound to active site and secondary binding pocket
Classification: LYASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-01-17
Authors: Ismail, M.M.
PDB entry 8vq7: hCA-II-apo structure
Classification: LYASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.409 Å
Deposited: 2024-01-17
Authors: Ismail, M.M.
PDB entry 8vq8: Immune receptor complex
Classification: IMMUNE SYSTEM
Source organism: Influenza A virus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2024-01-17
Authors: Chaurasia, P., Littler, D.R., La Gruta, N., Rossjohn, J.
PDB entry 8vq9: Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Classification: VIRAL PROTEIN
Source organism: Sarbecovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-01-18
Authors: Lee, J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8vqa: Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Classification: VIRAL PROTEIN
Source organism: Sarbecovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-01-18
Authors: Lee, J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)