LiteFold/PDB huggingface dataset:
PDB entry 4jhx: Crystal structure of anabolic ornithine carbamoyltransferase from Vibrio vulnificus in complex with carbamoylphosphate and arginine
Classification: TRANSFERASE
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-03-05
Authors: Shabalin, I.G., Bacal, P., Winsor, J., Grimshaw, S., Grabowski, M., Chordia, M.D., Shuvalova, L., Anderson, W.F., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4jhy: Crystal structure of a TBP-like protein (BDI_3606) from Parabacteroides distasonis ATCC 8503 at 1.90 A resolution
Classification: Structural Genomics, Unknown Function
Source organism: Parabacteroides distasonis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-05
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4jhz: Structure of E. coli beta-Glucuronidase bound with a novel, potent inhibitor 2-[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]-N-[(1S,2S,5S)-2,5-dimethoxycyclohexyl]acetamide
Classification: hydrolase/hydrolase inhibitor
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.831 Å
Deposited: 2013-03-05
Authors: Roberts, A.B., Wallace, B.D., Redinbo, M.R.
PDB entry 4ji0: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.492 Å
Deposited: 2013-03-05
Authors: Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
PDB entry 4ji1: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Classification: Ribosome/Antibiotic
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.144 Å
Deposited: 2013-03-05
Authors: Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
PDB entry 4ji2: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.64 Å
Deposited: 2013-03-05
Authors: Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
PDB entry 4ji3: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2013-03-05
Authors: Demirci, H., Wang, L., Murphy, F.V., Murphy, E.L., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
PDB entry 4ji4: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Classification: Ribosome/Antibiotic
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.692 Å
Deposited: 2013-03-05
Authors: Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
PDB entry 4ji5: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Classification: Ribosome/Antibiotic
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.85 Å
Deposited: 2013-03-05
Authors: Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
PDB entry 4ji6: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2013-03-05
Authors: Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
PDB entry 4ji7: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2013-03-05
Authors: Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
PDB entry 4ji8: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Classification: Ribosome/Antibiotic
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.742 Å
Deposited: 2013-03-05
Authors: Demirci, H., Wang, L., Murphy IV, F., Murphy, E., Carr, J., Blanchard, S., Jogl, G., Dahlberg, A.E., Gregory, S.T.
PDB entry 4ji9: JAK2 kinase (JH1 domain) in complex with TG101209
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-05
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 4jia: JAK2 kinase (JH1 domain) in complex with compound 9
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-03-05
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 4jib: Crystal structure of of PDE2-inhibitor complex
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2013-03-05
Authors: Pandit, J.
PDB entry 4jic: Glycerol Trinitrate Reductase NerA from Agrobacterium radiobacter
Classification: OXIDOREDUCTASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-03-05
Authors: Oberdorfer, G., Gruber, K.
PDB entry 4jid: Crystal structure of BaLdcB / VanY-like L,D-carboxypeptidase Zinc(II)-free
Classification: HYDROLASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-03-05
Authors: Minasov, G., Wawrzak, Z., Onopriyenko, O., Skarina, T., Shatsman, S., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4jie: Structural analysis and insights into glycon specificity of the rice GH1 Os7BGlu26 beta-D-mannosidase
Classification: HYDROLASE
Source organism: Oryza sativa Indica Group
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2013-03-05
Authors: Tankrathok, A., Luang, S., Robinson, R.C., Kimura, A., Hrmova, M., Ketudat Cairns, J.R.
PDB entry 4jif: Co-crystal structure of ICAP1 PTB domain in complex with a KRIT1 peptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2013-03-05
Authors: Liu, W., Boggon, T.J.
PDB entry 4jig: Crystal structure of a putative dehydrogenase from Burkholderia cenocepacia
Classification: OXIDOREDUCTASE
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-03-06
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4jih: Crystal Structure Of AKR1B10 Complexed With NADP+ And Epalrestat
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-03-06
Authors: Zhang, L., Zheng, X., Zhang, H., Zhao, Y., Chen, K., Zhai, J., Hu, X., Structural Genomics Consortium (SGC)
PDB entry 4jii: Crystal Structure Of AKR1B10 Complexed With NADP+ And Zopolrestat
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-06
Authors: Zhang, L., Zheng, X., Zhang, H., Zhao, Y., Chen, K., Zhai, J., Hu, X., Structural Genomics Consortium (SGC)
PDB entry 4jij: Crystal structure of an inactive mutant of MMP-9 catalytic domain in complex with a fluorogenic synthetic peptidic substrate
Classification: HYDROLASE/substrate
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2013-03-06
Authors: Stura, E.A., Vera, L., Cassar-Lajeunesse, E., Tranchant, I., Amoura, M., Dive, V.
PDB entry 4jik: X-RAY Crystal structure of compound 22a (R)-2-(4-chlorophenyl)-8-(piperidin-3-ylamino)imidazo[1,2-c]pyrimidine-5-carboxamide bound to human chk1 kinase domain
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-06
Authors: Fischmann, T.O.
PDB entry 4jim: Native Crystal Structure of N10-Formyltetrahydrofolate Synthetase
Classification: LIGASE
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-03-06
Authors: Celeste, L.R., Lovelace, L.L., Lebioda, L.
PDB entry 4jin: X-ray crystal structure of Archaeoglobus fulgidus Rio1 bound to (2E)-N-benzyl-2-cyano-3-(pyridine-4-yl)acrylamide (WP1086)
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.095 Å
Deposited: 2013-03-06
Authors: Mielecki, M., Krawiec, K., Kiburu, I., Grzelak, K., Wlodzimierz, Z., Kierdaszuk, B., Kowa, K., Fokt, I., Szymanski, S., Piotr, S., Szeja, W., Priebe, W., Lesyng, B., LaRonde-LeBlanc, N.
PDB entry 4jio: Bro1 V domain and ubiquitin
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Naumovozyma castellii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2013-03-06
Authors: Pashkova, N., Gakhar, L., Piper, R.C.
PDB entry 4jip: Crystal structure of glycerol trinitrate reductase NerA from Agrobacterium radiobacter in complex with 4-hydroxybenzaldehyde
Classification: OXIDOREDUCTASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2013-03-06
Authors: Oberdorfer, G., Gruber, K.
PDB entry 4jiq: Crystal structure of glycerol trinitrate reductase NerA from Agrobacterium radiobacter in complex with 1-nitro-2-phenylpropene
Classification: OXIDOREDUCTASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2013-03-06
Authors: Oberdorfer, G., Gruber, K.
PDB entry 4jir: Crystal Structure Of Aldose Reductase (AKR1B1) Complexed With NADP+ And Epalrestat
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-06
Authors: Zhang, L., Zheng, X., Zhang, H., Zhao, Y., Chen, K., Zhai, J., Hu, X.
PDB entry 4jis: Crystal structure of ribitol 5-phosphate cytidylyltransferase (TarI) from Bacillus subtilis
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. spizizenii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.772 Å
Deposited: 2013-03-06
Authors: Yang, C.S., Chen, S.C., Chen, Y.R., Kuan, S.M., Liu, Y.H., Chen, Y.
PDB entry 4jit: Crystal Structure of E. coli XGPRT in complex with (S)-3-(Guanin-9-yl)pyrrolidin-N-ylacetylphosphonic acid
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-03-07
Authors: Keough, D.T., Hockova, D., Rejman, D., Spacek, P., Vrbkova, S., Krecmerova, M., Eng, W.S., Jans, H., West, N.P., Naesens, L.M.J., de Jersey, J., Guddat, L.W.
PDB entry 4jiu: Crystal structure of the metallopeptidase zymogen of Pyrococcus abyssi abylysin
Classification: HYDROLASE
Source organism: Pyrococcus abyssi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2013-03-07
Authors: Lopez-Pelegrin, M., Cerda-Costa, N., Martinez-Jimenez, F., Cintas-Pedrola, A., Canals, A., Peinado, J.R., Marti-Renom, M.A., Lopez-Otin, C., Arolas, J.L., Gomis-Ruth, F.X.
PDB entry 4jiv: VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
Classification: HYDROLASE/PROTEIN BINDING
Source organism: Enterobacteria phage T4; Vibrio cholerae O1 biovar eltor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.903 Å
Deposited: 2013-03-07
Authors: Buth, S.A., Leiman, P.G., Shneider, M.M.
PDB entry 4jiw: c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
Classification: HYDROLASE/PROTEIN BINDING
Source organism: Enterobacteria phage T4; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.402 Å
Deposited: 2013-03-07
Authors: Buth, S.A., Leiman, P.G., Shneider, M.M.
PDB entry 4jix: Crystal structure of the metallopeptidase zymogen of Methanocaldococcus jannaschii jannalysin
Classification: HYDROLASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-07
Authors: Lopez-Pelegrin, M., Cerda-Costa, N., Martinez-Jimenez, F., Cintas-Pedrola, A., Canals, A., Peinado, J.R., Marti-Renom, M.A., Lopez-Otin, C., Arolas, J.L., Gomis-Ruth, F.X.
PDB entry 4jiy: RNA three-way junction stabilized by a supramolecular di-iron(II) cylinder drug
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2013-03-07
Authors: Sigel, R.K.O., Schnabl, J.A., Freisinger, E., Spingler, B., Hannon, M.J.
PDB entry 4jiz: Human Mob1-phosphopeptide complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-03-07
Authors: Stach, L., Ogrodowicz, R.W., Rock, J.M., Lim, D., Yaffe, M.B., Amon, A., Smerdon, S.J.
PDB entry 4jj0: Crystal structure of MamP
Classification: ELECTRON TRANSPORT
Source organism: Magnetococcus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-07
Authors: Siponen, M., Pignol, D., Arnoux, P.
PDB entry 4jj2: High resolution structure of a C-terminal fragment of the T4 phage gp5 beta-helix
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2013-03-07
Authors: Buth, S.A., Leiman, P.G., Boudko, S.P.
PDB entry 4jj3: Crystal structure of MamP soaked with iron(II)
Classification: ELECTRON TRANSPORT
Source organism: Magnetococcus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-03-07
Authors: Siponen, M., Pignol, D., Arnoux, P.
PDB entry 4jj4: Crystal structure of a catalytic mutant of Axe2 (Axe2-D191A), an acetylxylan esterase from Geobacillus stearothermophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2013-03-07
Authors: Lansky, S., Alalouf, O., Solomon, V., Alhassid, A., Belrahli, H., Govada, L., Chayan, N.E., Shoham, Y., Shoham, G.
PDB entry 4jj5: CRYSTAL STRUCTURE OF THE Fab FRAGMENT OF 1C2, A MONOCLONAL ANTIBODY SPECIFIC for POLY-GLUTAMINE
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.445 Å
Deposited: 2013-03-07
Authors: Klein, F.A.C., Zeder-Lutz, G., Cousido-Siah, A., Mitschler, A., Katz, A., Eberling, P., Mandel, J.L., Podjarny, A., Trottier, Y.
PDB entry 4jj6: Crystal structure of a catalytic mutant of Axe2 (Axe2-H194A), an acetylxylan esterase from Geobacillus stearothermophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-07
Authors: Lansky, S., Alalouf, O., Solomon, V., Alhassid, A., Belrahli, H., Govada, L., Chayan, N.E., Shoham, Y., Shoham, G.
PDB entry 4jj7: Caspase-3 specific unnatural amino acid-based peptides
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.178 Å
Deposited: 2013-03-07
Authors: Vickers, C.J., Gonzalez-Paez, G.E., Wolan, D.W.
PDB entry 4jj8: Caspase-3 specific unnatural amino acid peptides
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.937 Å
Deposited: 2013-03-07
Authors: Vickers, C.J., Gonzalez-Paez, G.E., Wolan, D.W.
PDB entry 4jj9: Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase
Classification: ISOMERASE
Source organism: Bordetella bronchiseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2013-03-07
Authors: Eswaramoorthy, S., Chamala, S., Evans, B., Foti, F., Gizzi, A., Hillerich, B., Kar, A., Lafleur, J., Seidel, R., Villigas, G., Zencheck, W., Al Obaidi, N., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jja: Crystal structure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution
Classification: Structural Genomics, Unknown Function
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-03-07
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4jjb: Crystal structure of the Abl-SH3 domain at pH3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-03-07
Authors: Camara-Artigas, A., Martin-Garcia, J.M.
PDB entry 4jjc: Crystal structure of the Abl-SH3 domain at pH5
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-03-07
Authors: Camara-Artigas, A., Martin-Garcia, J.M.
PDB entry 4jjd: Crystal structure of the N114A Abl-SH3 domain mutant at pH4
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-03-07
Authors: Camara-Artigas, A., Martin-Garcia, J.M.
PDB entry 4jje: Caspase-3 specific unnatural amino acid peptides
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.481 Å
Deposited: 2013-03-07
Authors: Vickers, C.J., Gonzalez-Paez, G.E., Wolan, D.W.
PDB entry 4jjf: Crystal structure of FE-hydrogenase from methanothermobacter marburgensis in complex with 2-naphthylisocyanide
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-07
Authors: Tamura, H., Warkentin, E., Ermler, U., Shima, S.
PDB entry 4jjg: Crystal structure of FE-hydrogenase from methanothermobacter marburgensis in complex with toluenesulfonylmethylisocyanide
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-07
Authors: Tamura, H., Warkentin, E., Ermler, U., Shima, S.
PDB entry 4jjh: Crystal structure of the D1 domain from human Nectin-4 extracellular fragment [PSI-NYSGRC-005624]
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-03-07
Authors: Kumar, P.R., Bonanno, J., Ahmed, M., Banu, R., Bhosle, R., Calarese, D., Celikigil, A., Chamala, S., Chan, M.K., Chowdhury, S., Fiser, A., Garforth, S., Glenn, A.S., Hillerich, B., Khafizov, K., Love, J., Patel, H., Seidel, R., Stead, M., Toro, R., Nathenson, S.G., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
PDB entry 4jji: Crystal structure of S-nitrosoglutathione reductase from Arabidopsis thalina, complex with NAD+
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-07
Authors: Weichsel, A., Crotty, J., Montfort, W.R.
PDB entry 4jjj: The structure of T. fusca GH48 D224N mutant
Classification: HYDROLASE
Source organism: Thermobifida fusca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-03-07
Authors: Alahuhta, P.M., Lunin, V.V.
PDB entry 4jjk: Crystal Structure of N10-Formyltetrahydrofolate Synthetase with Folate
Classification: LIGASE
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-03-08
Authors: Celeste, L.R., Lovelace, L.L., Lebioda, L.
PDB entry 4jjm: Structure of a cyclophilin from Citrus sinensis (CsCyp) in complex with cyclosporin A
Classification: ISOMERASE/IMMUNOSUPPRESSANT
Source organism: Citrus sinensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2013-03-08
Authors: Campos, B.M., Ambrosio, A.L.B., Souza, T.A.C.B., Barbosa, J.A.R.G., Benedetti, C.E.
PDB entry 4jjn: Crystal structure of heterochromatin protein Sir3 in complex with a silenced yeast nucleosome
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2013-03-08
Authors: Wang, F., Li, G., Mohammed, A., Lu, C., Currie, M., Johnson, A., Moazed, D.
PDB entry 4jjo: crystal structure of apo-clavibacter Michiganensis expansin
Classification: SUGAR BINDING PROTEIN
Source organism: Clavibacter michiganensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-03-08
Authors: Yennawar, N.H., Yennawar, H.P., Georgelis, N., Cosgrove, D.J.
PDB entry 4jjp: 2.06 Angstrom resolution crystal structure of phosphomethylpyrimidine kinase (thiD)from Clostridium difficile 630
Classification: TRANSFERASE
Source organism: Clostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.056 Å
Deposited: 2013-03-08
Authors: Halavaty, A.S., Wawrzak, Z., Onopriyenko, O., Grimshaw, S., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4jjq: Crystal structure of usp7-ntd with an e2 enzyme
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-03-08
Authors: Saridakis, V.
PDB entry 4jjr: A P21 crystal form of mammalian casein kinase 1 delta
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4078 Å
Deposited: 2013-03-08
Authors: Zeringo, N.A., Bellizzi, J.J.
PDB entry 4jjs: Crystal structure of HCV NS5B polymerase in complex with COMPOUND 2
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-08
Authors: Coulombe, R.
PDB entry 4jjt: The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.496 Å
Deposited: 2013-03-08
Authors: Tan, K., Holowicki, J., Endres, M., Kim, C.-Y., Kim, H., Hung, L.-W., Terwilliger, T.C., Joachimiak, A., Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
PDB entry 4jju: Crystal structure of HCV NS5B polymerase in complex with COMPOUND 29
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2013-03-08
Authors: Coulombe, R.
PDB entry 4jjx: Dodecameric structure of spermidine N-acetyltransferase SpeG from Vibrio cholerae O1 biovar eltor
Classification: TRANSFERASE
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2013-03-08
Authors: Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Kuhn, M.L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4jjy: Alix V domain
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 6.503 Å
Deposited: 2013-03-08
Authors: Pashkova, N., Gakhar, L., Yu, L., Piper, R.C.
PDB entry 4jjz: Crystal Structure of N10-Formyltetrahydrofolate Synthetase with ADP and Formylphosphate
Classification: LIGASE
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-08
Authors: Celeste, L.R., Lovelace, L.L., Lebioda, L.
PDB entry 4jk0: Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU
Classification: RNA BINDING PROTEIN/RNA
Source organism: Tomato bushy stunt virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-03-08
Authors: Katorcha, E., Tamjar, J., Popov, A.N., Malinina, L.
PDB entry 4jk1: X-ray crystal structure of Escherichia coli sigma70 holoenzyme in complex with Guanosine tetraphosphate (ppGpp)
Classification: TRANSCRIPTION, TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2013-03-09
Authors: Murakami, K.S.
PDB entry 4jk2: X-ray crystal structure of Escherichia coli sigma70 holoenzyme in complex with guanosine pentaphosphate (pppGpp)
Classification: TRANSCRIPTION, TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 4.201 Å
Deposited: 2013-03-09
Authors: Murakami, K.S.
PDB entry 4jk3: PylD holoenzyme (SeMet)
Classification: OXIDOREDUCTASE
Source organism: Methanosarcina barkeri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-09
Authors: Quitterer, F., Beck, P., Bacher, A., Groll, M.
PDB entry 4jk4: Crystal Structure of Bovine Serum Albumin in complex with 3,5-diiodosalicylic acid
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.653 Å
Deposited: 2013-03-09
Authors: Zielinski, K., Bujacz, A., Sekula, B., Bujacz, G.
PDB entry 4jk5: Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Ser)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-03-09
Authors: Buth, S.A., Leiman, P.G., Chen, S., Heinis, C.
PDB entry 4jk6: Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Aba)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-09
Authors: Buth, S.A., Leiman, P.G., Chen, S., Heinis, C.
PDB entry 4jk7: Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Mg ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K., MacMillan, A.M.
PDB entry 4jk8: Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Mg ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jk9: Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Co ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jka: Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Co ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jkb: Open and closed forms of V1788D human PRP8 RNase H-like domain with bound Mg ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jkc: Open and closed forms of T1800E human PRP8 RNase H-like domain with bound Mg ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jkd: Open and closed forms of I1790Y human PRP8 RNase H-like domain with bound Mg ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jke: Open and closed forms of T1789P human PRP8 RNase H-like domain with bound Mg ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jkf: Open and closed forms of T1791P+R1865A human PRP8 RNase H-like domain with bound Mg ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jkg: Open and closed forms of mixed T1789P+R1865A and R1865A human PRP8 RNase H-like domain with bound Mg ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jkh: Open and closed forms of D1781E human PRP8 RNase H-like domain with bound Mg ion
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-09
Authors: Schellenberg, M.J., Wu, T., Ritchie, D.B., Atta, K.A., MacMillan, A.M.
PDB entry 4jki: Crystal Structure of N10-Formyltetrahydrofolate Synthetase with ZD9331, Formylphosphate, and ADP
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-03-09
Authors: Celeste, L.R., Lovelace, L.L., Lebioda, L.
PDB entry 4jkj: Crystal Structure of the S18Y Variant of Ubiquitin Carboxy-terminal Hydrolase L1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.151 Å
Deposited: 2013-03-09
Authors: Davies, C.W., Ringe, D., Petsko, G.A., Das, C.
PDB entry 4jkk: Crystal Structure of Streptococcus agalactiae beta-glucuronidase in space group I222
Classification: HYDROLASE
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2013-03-09
Authors: Wallace, B.D., Redinbo, M.R.
PDB entry 4jkl: Crystal Structure of Streptococcus agalactiae beta-glucuronidase in space group P21212
Classification: HYDROLASE
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.288 Å
Deposited: 2013-03-09
Authors: Wallace, B.D., Redinbo, M.R.
PDB entry 4jkm: Crystal Structure of Clostridium perfringens beta-glucuronidase
Classification: HYDROLASE
Source organism: Clostridium perfringens; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.263 Å
Deposited: 2013-03-09
Authors: Wallace, B.D., Redinbo, M.R.
PDB entry 4jkn: Mercury Metallated Pseudomonas aeruginosa Azurin at 1.54 A
Classification: ELECTRON TRANSPORT
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.536 Å
Deposited: 2013-03-10
Authors: Zampino, A.P., Masters, F.M., Bladholm, E.L., Berry, S.B., Panzner, M.J., Ziegler, C.J.
PDB entry 4jko: Crystal structure of a catalytic mutant of Axe2 (Axe2_S15A), an acetylxylan esterase from Geobacillus stearothermophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-11
Authors: Azulay, D., Lansky, S., Alalouf, O., Solomon, V., Alhassid, A., Belrahli, H., Govada, L., Chayan, N.E., Shoham, Y., Shoham, G.
PDB entry 4jkp: Restricting HIV-1 Pathways for Escape using Rationally-Designed Anti-HIV-1 Antibodies
Classification: viral protein/immune system
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2013-03-11
Authors: Diskin, R., Bjorkman, P.J.
PDB entry 4jkq: Crystal structure of the N-terminal region of the human ryanodine receptor 2
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2013-03-11
Authors: Bauerova, V., Sevcik, J.
PDB entry 4jkr: Crystal Structure of E. coli RNA Polymerase in complex with ppGpp
Classification: TRANSCRIPTION, transferase
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 4.2 Å
Deposited: 2013-03-11
Authors: Zuo, Y., Wang, Y., Steitz, T.A.
PDB entry 4jks: Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with DMSO, NYSGRC Target 14306
Classification: TRANSFERASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2013-03-11
Authors: Malashkevich, V.N., Bhosle, R., Toro, R., Hillerich, B., Gizzi, A., Garforth, S., Kar, A., Chan, M.K., Lafluer, J., Patel, H., Matikainen, B., Chamala, S., Lim, S., Celikgil, A., Villegas, G., Evans, B., Love, J., Fiser, A., Khafizov, K., Seidel, R., Bonanno, J.B., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jkt: Crystal structure of mouse Glutaminase C, BPTES-bound form
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2013-03-11
Authors: Fornezari, C., Ferreira, A.P.S., Dias, S.M.G., Ambrosio, A.L.B.
PDB entry 4jku: Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with quinaldic acid, NYSGRC Target 14306
Classification: TRANSFERASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2013-03-11
Authors: Malashkevich, V.N., Bhosle, R., Toro, R., Hillerich, B., Gizzi, A., Garforth, S., Kar, A., Chan, M.K., Lafluer, J., Patel, H., Matikainen, B., Chamala, S., Lim, S., Celikgil, A., Villegas, G., Evans, B., Love, J., Fiser, A., Khafizov, K., Seidel, R., Bonanno, J.B., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4jkv: Structure of the human smoothened 7TM receptor in complex with an antitumor agent
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2013-03-11
Authors: Wang, C., Wu, H., Katritch, V., Han, G.W., Huang, X., Liu, W., Siu, F.Y., Roth, B.L., Cherezov, V., Stevens, R.C., GPCR Network (GPCR)
PDB entry 4jkw: Structure of the extracellular domain of butyrophilin BTN3A1 in complex with Isopentenyl pyrophosphate (IPP)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2013-03-12
Authors: Kumar, A., Mori, L., De Libero, G.
PDB entry 4jkx: Crystal structure Mistletoe Lectin I from Viscum album in complex with kinetin at 2.35 A resolution.
Classification: HYDROLASE
Source organism: Viscum album
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-03-12
Authors: Prokofev, I.I., Lashkov, A.A., Gabdoulkhakov, A.G., Meyer, A., Barciszewski, J., Betzel, C., Mikhailov, A.M.
PDB entry 4jky: Cobalt between two ADP's in the active site of adenylate kinase
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.373 Å
Deposited: 2013-03-12
Authors: Cho, Y.-J., Kern, D.
PDB entry 4jkz: Crystal structure of ms6564 from mycobacterium smegmatis
Classification: TRANSCRIPTION
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-12
Authors: Yang, S.F., Gao, Z.Q., He, Z.G., Dong, Y.H.
PDB entry 4jl0: Crystal structure of PcrH in complex with the chaperone binding region of PopB
Classification: CHAPERONE
Source organism: Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2013-03-12
Authors: Discola, K.F., Forster, A., Simorre, J.P., Attree, I., Dessen, A., Job, V.
PDB entry 4jl1: Crystal structure of a bacterial fucosidase with a multivalent iminocyclitol inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2013-03-12
Authors: Wright, D.W., Davies, G.J.
PDB entry 4jl2: Crystal structure of a bacterial fucosidase with a monovalent iminocyclitol inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-03-12
Authors: Wright, D.W., Davies, G.J.
PDB entry 4jl3: Crystal structure of ms6564-dna complex
Classification: TRANSCRIPTION/DNA
Source organism: Mycobacterium smegmatis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-12
Authors: Yang, S.F., Gao, Z.Q., He, Z.G., Dong, Y.H.
PDB entry 4jl4: Crystal structure of the complex between PPARgamma LBD and the ligand LJ570 [(2S)-3-(biphenyl-4-yl)-2-(biphenyl-4-yloxy)propanoic acid]
Classification: Transcription/Agonist
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-12
Authors: Pochetti, G., Montanari, R., Capelli, D.
PDB entry 4jl5: A high resolution structure of Aquifex Adenylate kinase with 2 ADP's
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2013-03-12
Authors: Cho, Y.-J., Kern, D.
PDB entry 4jl6: Crystal Structure of Adenylate kinase with 2 ADP's
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-03-12
Authors: Cho, Y.-J., Kern, D.
PDB entry 4jl7: Crystal Structure of the Chemokine Receptor CXCR2 in Complex with the First PDZ Domain of NHERF1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2013-03-12
Authors: Lu, G., Wu, Y., Jiang, Y., Brunzelle, J., Sirinupong, N., Li, C., Yang, Z.
PDB entry 4jl8: A various kinds of ADP conformations in the Adenylate kinase active site
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2013-03-12
Authors: Cho, Y.-J., Kern, D.
PDB entry 4jl9: Crystal structure of mouse TBK1 bound to BX795
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.0999 Å
Deposited: 2013-03-12
Authors: Li, P., Shu, C.
PDB entry 4jla: Crystal Structure of Adenylate kinase with 2 ADP's in the active site
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2013-03-12
Authors: Cho, Y.-J., Kern, D.
PDB entry 4jlb: Crystal Structures of Adenylate kinase with 2ADP's
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.528 Å
Deposited: 2013-03-12
Authors: Cho, Y.-J., Kern, D.
PDB entry 4jlc: Crystal structure of mouse TBK1 bound to SU6668
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-03-12
Authors: Li, P.
PDB entry 4jld: Crystal Structures of adenylate kinase with 2 ADP's
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.552 Å
Deposited: 2013-03-12
Authors: Cho, Y.-J., Kern, D.
PDB entry 4jle: Structure of the P. falciparum PFI1780w PHIST domain
Classification: PROTEIN BINDING
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-03-12
Authors: Slater, L., Vakonakis, I.
PDB entry 4jlf: Inhibitor resistant (R220A) substitution in the Mycobacterium tuberculosis beta-lactamase
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-03-12
Authors: Hazra, S., Kurz, S., Blanchard, J., Bonomo, R.
PDB entry 4jlg: SETD7 in complex with inhibitor (R)-PFI-2 and S-adenosyl-methionine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.896 Å
Deposited: 2013-03-12
Authors: Dong, A., Wu, H., Zeng, H., El Bakkouri, M., Barsyte, D., Vedadi, M., Tatlock, J., Owen, D., Bunnage, M., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Brown, P.J., Structural Genomics Consortium (SGC)
PDB entry 4jlh: HIV-1 Integrase Catalytic Core Domain A128T Mutant Complexed with Allosteric Inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2013-03-12
Authors: Feng, L., Kvaratskhelia, M.
PDB entry 4jli: Crystal Structure of Escherichia coli Hfq Proximal Pore Mutant
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2013-03-12
Authors: Robinson, K.E., Orans, J.
PDB entry 4jlj: Human dCK C4S-S74E mutant in complex with UDP and the F2.1.1 inhibitor (2-[({2-[3-(2-FLUOROETHOXY)-4-METHOXYPHENYL]-1,3-THIAZOL-4-YL}METHYL)SULFANYL]PYRIMIDINE-4,6-DIAMINE)
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-12
Authors: Nomme, J., Lavie, A.
PDB entry 4jlk: Human dCK C4S-S74E mutant in complex with UDP and the F2.2.1 inhibitoR (2-[({2-[3-(2-FLUOROETHOXY)-4-METHOXYPHENYL]-5-METHYL-1,3-THIAZOL-4-YL}METHYL)SULFANYL]PYRIMIDINE-4,6-DIAMINE)
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2013-03-12
Authors: Nomme, J., Lavie, A.
PDB entry 4jll: Crystal Structure of the evolved variant of the computationally designed serine hydrolase, OSH55.4_H1 covalently bound with FP-alkyne, Northeast Structural Genomics Consortium (NESG) Target OR273
Classification: Structural Genomics, Unknown Function
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2013-03-12
Authors: Kuzin, A., Lew, S., Rajagopalan, S., Seetharaman, J., Tong, S., Everett, J.K., Acton, T.B., Baker, D., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 4jlm: Human dCK C4S-S74E mutant in complex with UDP and the F2.3.1 inhibitor (2-[({5-ETHYL-2-[3-(2-FLUOROETHOXY)-4-METHOXYPHENYL]-1,3-THIAZOL-4-YL}METHYL)SULFANYL]PYRIMIDINE-4,6-DIAMINE)
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2013-03-12
Authors: Nomme, J., Lavie, A.
PDB entry 4jln: Human dCK C4S-S74E mutant in complex with UDP and the F2.4.1 inhibitor (2-[({2-[3-(2-FLUOROETHOXY)-4-METHOXYPHENYL]-5-PROPYL-1,3-THIAZOL-4-YL}METHYL)SULFANYL]PYRIMIDINE-4,6-DIAMINE)
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-03-12
Authors: Nomme, J., Lavie, A.
PDB entry 4jlo: Crystal structure of Aquifex adenylate kinase R150K mutant
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2013-03-12
Authors: Cho, Y.-J., Phung, L., Kern, D.
PDB entry 4jlp: Crystal structure of R150K aquifex adenylate kinase mutant
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.433 Å
Deposited: 2013-03-12
Authors: Cho, Y.-J., Phung, L., Kern, D.
PDB entry 4jlq: Crystal structure of human Karyopherin-beta2 bound to the PY-NLS of Saccharomyces cerevisiae NAB2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2013-03-12
Authors: Sampathkumar, P., Gizzi, A., Rout, M.P., Chook, Y.M., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC), Nucleocytoplasmic Transport: a Target for Cellular Control (NPCXstals)
PDB entry 4jlr: Crystal structure of a designed Respiratory Syncytial Virus Immunogen in complex with Motavizumab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2013-03-12
Authors: Rupert, P.B., Correia, B., Schief, W., Strong, R.K.
PDB entry 4jls: Crystal Structure of E. coli XGPRT in complex with (3R,4S)-4-(Guanin-9-yl)-3-hydroxypyrrolidin-1-N-ylacetylphosphonic acid
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-12
Authors: Keough, D.T., Hockova, D., Rejman, D., Spacek, P., Vrbkova, S., Krecmerova, M., Eng, W.S., Jans, H., West, N.P., Naesens, L.M.J., de Jersey, J., Guddat, L.W.
PDB entry 4jlt: Crystal structure of P450 2B4(H226Y) in complex with paroxetine
Classification: OXIDOREDUCTASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2013-03-13
Authors: Shah, M.B., Pascual, J., Stout, C.D., Halpert, J.R.
PDB entry 4jlu: Crystal structure of BRCA1 BRCT with doubly phosphorylated Abraxas
Classification: ANTITUMOR PROTEIN/SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2013-03-13
Authors: Badgujar, D., Varma, A.K.
PDB entry 4jlv: Crystal structure of the chimerical protein CapA1B1 in complex with ADP-Mg
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-13
Authors: Gruszczyk, J., Olivares-Illana, V., Nourikyan, J., Fleurie, A., Bechet, E., Aumont-Nicaise, M., Gueguen-Chaignon, V., Morera, S., Grangeasse, C., Nessler, S.
PDB entry 4jlw: Crystal structure of formaldehyde dehydrogenase from Pseudomonas aeruginosa
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-03-13
Authors: Chen, S., Liao, Y.P., Wang, D.L., Wang, S., Ding, J.F., Wang, Y.M., Cai, L.J., Ran, X.Y., Zhu, H.X.
PDB entry 4jlx: Structure of porcine cyclic GMP-AMP synthase (cGAS)
Classification: DNA BINDING PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.004 Å
Deposited: 2013-03-13
Authors: Civril, F., Hopfner, K.P.
PDB entry 4jly: Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae
Classification: TRANSFERASE
Source organism: Vibrio cholerae O1 biovar eltor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.882 Å
Deposited: 2013-03-13
Authors: Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Kuhn, M.L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4jlz: Structure of porcine cGAS in complex with bound UTP
Classification: DNA BINDING PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2013-03-13
Authors: Civril, F., Hopfner, K.P.
PDB entry 4jm0: Structure of Human Cytomegalovirus Immune Modulator UL141
Classification: CELL ADHESION
Source organism: Human herpesvirus 5
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2013-03-13
Authors: Nemcovicova, I., Zajonc, D.M.
PDB entry 4jm1: Crystal structure of a protein with alpha-lytic protease prodomain-like fold (BDI_0842) from Parabacteroides distasonis ATCC 8503 at 1.40 A resolution
Classification: Structural Genomics, Unknown Function
Source organism: Parabacteroides distasonis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-03-13
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4jm2: Crystal Structure of PGT 135 Fab in Complex with gp120 Core Protein from HIV-1 Strain JR-FL Bound to CD4 and 17b Fab
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2013-03-13
Authors: Kong, L., Wilson, I.A.