LiteFold/PDB huggingface dataset:
PDB entry 8xcn: Cryo-EM Structure of Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus variant-N1190A
Classification: OXIDOREDUCTASE
Source organism: Gluconobacter japonicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2023-12-09
Authors: Fukawa, E., Miyata, T., Makino, F., Adachi, T., Suzuki, Y., Tanaka, H., Namba, K., Sowa, K., Kitazumi, Y., Shirai, O.
PDB entry 8xco: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH in the initial stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcp: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the initial stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcq: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the initial stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcr: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADP and GLU in the initial stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcs: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH, AKG and NH4 in the initial stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xct: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcu: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH, AKG and GLU in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcv: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcw: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH and AKG in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcx: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcy: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xcz: Cryo-EM structure of glutamate dehydrogenase from thermococcus profundus incorporating NADP and GLU in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xd0: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH and AKG in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xd1: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xd2: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xd3: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xd4: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xd5: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADP and GLU in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xd6: Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH, AKG and NH4 in the steady stage of reaction
Classification: OXIDOREDUCTASE
Source organism: Thermococcus profundus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-12-10
Authors: Wakabayashi, T., Oide, M., Nakasako, M.
PDB entry 8xd7: Cryo-EM structure of inhibitor 25a bound human urea transporter A2.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xd9: Cryo-EM structure of human urea transporter A2.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xda: Cryo-EM structure of urea bound human urea transporter A2.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J., Zhizheng, H.
PDB entry 8xdb: Cryo-EM structure of human urea transporter A2.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xdc: Cryo-EM structure of human urea transporter A2.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xdd: Cryo-EM structure of human urea transporter A2.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapien
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xde: Cryo-EM structure of human urea transporter A3.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xdf: Cryo-EM structure of human urea transporter B.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xdg: Cryo-EM structure of zebrafish urea transporter.
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xdh: Cryo-EM structure of zebrafish urea transporter.
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-12-10
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xdi: Cryo-EM structure of zebrafish urea transporter.
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-12-11
Authors: Huang, S., Liu, L., Sun, J.
PDB entry 8xdj: Crystal structure of AMPylated HEPN toxin
Classification: TOXIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-12-11
Authors: Jin, C., Jeon, C., Kim, D.H., Lee, B.J.
PDB entry 8xdl: F-actin-END
Classification: PROTEIN BINDING
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.44 Å
Deposited: 2023-12-11
Authors: Wang, L., Li, J., Liu, T., Huang, M.
PDB entry 8xdm: F-actin-MAD
Classification: PROTEIN BINDING
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2023-12-11
Authors: Wang, L., Li, J., Liu, T., Huang, M.
PDB entry 8xdn: TOM complex with small molecule
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-12-11
Authors: Wang, W.H., Yang, M.J.
PDB entry 8xdo: O-methyltransferase from Lycoris longituba complexed with Mg and SAH
Classification: TRANSFERASE
Source organism: Lycoris longituba
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xdp: O-methyltransferase from Lycoris longituba complexed with Mg, SAH, and 3,4-dihydroxybenzaldehyde
Classification: TRANSFERASE
Source organism: Lycoris longituba
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xdq: O-methyltransferase from Lycoris aurea complexed with Mg and SAH
Classification: TRANSFERASE
Source organism: Lycoris aurea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xdr: O-methyltransferase from Lycoris aurea complexed with Mg, SAH, and 3,4-dihydroxybenzaldehyde
Classification: TRANSFERASE
Source organism: Lycoris aurea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xds: O-methyltransferase from Lycoris longituba F186Y variant complexed with Mg and SAH
Classification: TRANSFERASE
Source organism: Lycoris longituba
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xdt: O-methyltransferase from Lycoris longituba M52T variant complexed with Mg and SAH
Classification: TRANSFERASE
Source organism: Lycoris longituba
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xdu: O-methyltransferase from Lycoris longituba M52S variant complexed with Mg and SAH
Classification: TRANSFERASE
Source organism: Lycoris longituba
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xdv: O-methyltransferase from Lycoris longituba M52S-F186Y variant complexed with Mg and SAH
Classification: TRANSFERASE
Source organism: Lycoris longituba
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xdx: Amylase A from Alkalimonas delamerensis
Classification: HYDROLASE
Source organism: Alkalimonas delamerensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2023-12-11
Authors: Zhao, F., Xu, T.T.
PDB entry 8xdy: O-methyltransferase from Lycoris longituba M52A variant complexed with Mg, SAH, and 3,4-dihydroxybenzaldehyde
Classification: TRANSFERASE
Source organism: Lycoris longituba
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xe0: O-methyltransferase from Lycoris longituba M52W variant complexed with Mg, SAH, and 3,4-dihydroxybenzaldehyde
Classification: TRANSFERASE
Source organism: Lycoris longituba
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xe2: O-methyltransferase from Lycoris longituba D230A variant complexed with Mg, SAH, and 3,4-dihydroxybenzaldehyde
Classification: TRANSFERASE
Source organism: Lycoris longituba
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xe3: norbelladine 4'-O-methyltransferase complexed with Mg and SAH
Classification: TRANSFERASE
Source organism: Narcissus pseudonarcissus MK-2014
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xe4: norbelladine 4'-O-methyltransferase complexed with Mg, SAH, and norbelladine
Classification: TRANSFERASE
Source organism: Narcissus pseudonarcissus MK-2014
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xe5: norbelladine 4'-O-methyltransferase complexed with Mg, SAH, and 3,4-dihydroxybenzaldehyde
Classification: TRANSFERASE
Source organism: Narcissus pseudonarcissus MK-2014
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2023-12-11
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8xe7: Crystal structure of human Sirt2 without Sirt2-specific insertion
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-12-11
Authors: Konuma, T., Akashi, S.
PDB entry 8xe8: Solution structure of ubiquitin-like domain (UBL) of human ZFAND1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-12-11
Authors: Lai, C.H., Ko, K.T., Fan, P.J., Yu, T.A., Chang, C.F., Hsu, S.T.D.
PDB entry 8xe9: XBB.1.5 RBD in complex with BD55-1205
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-12-11
Authors: Feng, L.L.
PDB entry 8xea: XBB.1.5 spike protein in complex with BD55-1205
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-12-11
Authors: Feng, L.L.
PDB entry 8xee: Human DNMT3B mutant-R823G
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2023-12-11
Authors: Cho, C.-C., Yuan, H.S.
PDB entry 8xef: Cocktail GC2050-GC2225
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.41 Å
Deposited: 2023-12-11
Authors: Feng, L.L.
PDB entry 8xeg: Cryo-EM structure of Adeno-associated Virus 9P31 in 1.76 angstrom.
Classification: VIRUS
Source organism: Adeno-associated virus 9
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.76 Å
Deposited: 2023-12-12
Authors: Zhang, R., Liu, Y., Lou, Z.
PDB entry 8xeh: Crystal structure of HEPN-MNT complex
Classification: PROTEIN BINDING
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-12-12
Authors: Jin, C., Jeon, C., Kim, D.H., Lee, B.J.
PDB entry 8xei: Cryo-EM structure of integrin ITGAV/ITGB3 complex, conformation 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-12-12
Authors: Xi, Z.
PDB entry 8xej: Cryo-EM structure of human XKR8-basigin complex in lipid nanodisc
Classification: LIPID TRANSPORT
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2023-12-12
Authors: Sakuragi, T.S., Kanai, R.K., Kikkawa, M.K., Toyoshima, C.T., Nagata, S.N.
PDB entry 8xek: Cryo-EM structure of integrin ITGAV/ITGB3 complex, conformation 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-12-12
Authors: Xi, Z.
PDB entry 8xel: Cryo-EM structure of integrin ITGAV/ITGB3 complex, conformation 3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-12-12
Authors: Xi, Z.
PDB entry 8xem: Crystal structure of apo HEPN toxin
Classification: TOXIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-12-12
Authors: Jin, C., Jeon, C., Kim, D.H., Lee, B.J.
PDB entry 8xen: Cryo-EM structure of integrin ITGAV/ITGB3 complex, conformation 4
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-12-12
Authors: Xi, Z.
PDB entry 8xeo: Crystal structure of MNT antitoxin
Classification: ANTITOXIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2023-12-12
Authors: Jin, C., Jeon, C., Kim, D.H., Lee, B.J.
PDB entry 8xep: Crystal structure of a Legionella pneumophila type IV effector in complex with ubiquitin
Classification: HYDROLASE
Source organism: Homo sapiens; Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2023-12-12
Authors: Tan, J.X., Wang, X.F., Zhou, Y., Zhu, Y.Q.
PDB entry 8xeq: Solution NMR structure of DNA sequence d(CGATCG)2
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2023-12-12
Authors: Nair, M.S., Kumar, S.
PDB entry 8xer: Cryo-EM structure of integrin ITGAV, ITGB3 and Cilengitide TFA complex, conformation 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-12-12
Authors: Xi, Z.
PDB entry 8xes: The structure of HLA-A/L1-1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2023-12-12
Authors: Zhang, J.N., Yue, C., Liu, J.
PDB entry 8xet: High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pyogenes SSI-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2023-12-13
Authors: Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.
PDB entry 8xeu: Structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrichrome bound
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pyogenes SSI-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-12-13
Authors: Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.
PDB entry 8xew: Cryo-EM structure of defence-associatedsirtuin 2 (DSR2) H171A protein
Classification: CELL INVASION
Source organism: Bacillus sp. DSM 5850
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-12-13
Authors: Li, Y., Zhang, H., Zheng, Q., Wu, Y., Li, S.
PDB entry 8xey: The Crystal Structure of C-terminal kinase domain of RSK2 from Biortus
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-12-13
Authors: Wang, F., Cheng, W., Lv, Z., Meng, Q., Zhang, B.
PDB entry 8xez: Cryo-EM structure of integrin ITGAV/ITGB3 complex, conformation 5
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2023-12-13
Authors: Xi, Z.
PDB entry 8xf0: Crystal structure of the dissociated C-phycocyanin alpha-chain from Thermoleptolyngbya sp. O-77
Classification: PHOTOSYNTHESIS
Source organism: Leptolyngbya sp. O-77
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-12-13
Authors: Nguyen, H.K., Teramoto, T., Kakuta, Y., Yoon, K.S.
PDB entry 8xf1: Crystal structure of the dissociated C-phycocyanin beta-chain from Thermoleptolyngbya sp. O-77
Classification: PHOTOSYNTHESIS
Source organism: Leptolyngbya sp. O-77
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-12-13
Authors: Nguyen, H.K., Teramoto, T., Kakuta, Y., Yoon, K.S.
PDB entry 8xf2: Crystal structure of the reassembled C-phycocyanin hexamer from Thermoleptolyngbya sp. O-77
Classification: PHOTOSYNTHESIS
Source organism: Leptolyngbya sp. O-77
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-12-13
Authors: Nguyen, H.K., Teramoto, T., Kakuta, Y., Yoon, K.S.
PDB entry 8xf3: Crystal structure of the reassembled C-phycocyanin octamer from Thermoleptolyngbya sp. O-77
Classification: PHOTOSYNTHESIS
Source organism: Leptolyngbya sp. O-77
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-12-13
Authors: Nguyen, H.K., Teramoto, T., Kakuta, Y., Yoon, K.S.
PDB entry 8xf4: Structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with Bisucaberin bound
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pyogenes SSI-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-12-13
Authors: Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.
PDB entry 8xf6: Cryo-EM structure of integrin ITGAV, ITGB3 and Cilengitide TFA complex, conformation 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-12-13
Authors: Xi, Z.
PDB entry 8xf7: High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrioxamine E bound
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pyogenes SSI-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2023-12-13
Authors: Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.
PDB entry 8xf8: High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrioxamine B
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pyogenes SSI-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2023-12-13
Authors: Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.
PDB entry 8xf9: High-resolution structure of the siderophore periplasmic binding protein FtsB mutant Y137A from Streptococcus pyogenes
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pyogenes SSI-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2023-12-13
Authors: Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.
PDB entry 8xfa: Structure of the siderophore periplasmic binding protein FtsB mutant Y137A from Streptococcus pyogenes with ferrioxamine E bound
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pyogenes SSI-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-12-13
Authors: Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.
PDB entry 8xfb: Cryo-EM structure of partial dimeric WDR11-FAM91A1 complex
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-12-13
Authors: Jia, G.W., Deng, Q.H., Su, Z.M., Jia, D.
PDB entry 8xfc: Cryo-EM structure of the ATP-bound Mtb DppABCD with the D445A mutation of DppA
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2023-12-13
Authors: Hu, T., Zhang, B., Rao, Z.
PDB entry 8xfd: Crystal structure of pyruvate kinase tetramer in complex with allosteric activator, Mitapivat (MTPV, AG-348)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-12-13
Authors: Sun, R., Achour, A.
PDB entry 8xfe: Cryo-EM structure of defence-associated sirtuin 2 (DSR2) H171A protein in complex with DSR anti-defence 1(DSAD1)
Classification: CELL INVASION
Source organism: Bacillus sp. DSM 5850; Phage #D
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-12-13
Authors: Li, Y., Zhang, H., Zheng, Q., Wu, Y., Li, S.
PDB entry 8xff: Cryo-EM structure of defence-associatedsirtuin 2 (DSR2) H171A protein in complex with SPR phage tail tube protein
Classification: CELL INVASION
Source organism: Bacillus sp. DSM 5850; Phage #D
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2023-12-13
Authors: Li, Y., Zhang, H., Zheng, Q., Wu, Y., Li, S.
PDB entry 8xfg: Cryo-EM structure of integrin ITGAV, ITGB3 and CYCLO (RGDFK) complex, conformation 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-12-13
Authors: Xi, Z.
PDB entry 8xfh: Crystal structure of MiCGT(E152Q/V190D/S122P) in complex with UDP
Classification: TRANSFERASE
Source organism: Mangifera indica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-12-13
Authors: Zhang, Z.M., Zhou, Z.Q.
PDB entry 8xfi: High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrioxamine E bound (crystal form 2)
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pyogenes SSI-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-12-13
Authors: Caaveiro, J.M.M., Fernandez-Perez, J., Tsumoto, K.
PDB entry 8xfl: The Crystal Structure of MARK4 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-12-14
Authors: Wang, F., Cheng, W., Yuan, Z., Qi, J., Li, J.
PDB entry 8xfm: The Crystal Structure of MNK2 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-12-14
Authors: Wang, F., Cheng, W., Yuan, Z., Qi, J., Li, J.
PDB entry 8xfo: Cryo-EM structure of integrin ITGAV, ITGB3 and CYCLO (RGDFK) complex, conformation 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-12-14
Authors: Xi, Z.
PDB entry 8xfp: the pentamerA complex of LGR4-RSPO2-ZNRF3(delta RING)
Classification: MEMBRANE PROTEIN
Source organism: Camelus bactrianus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2023-12-14
Authors: Geng, Y., Wang, L.
PDB entry 8xfq: Structure of the alginate epimerase/lyase complexed with penta-mannuronic acid
Classification: ISOMERASE
Source organism: Azotobacter chroococcum NCIMB 8003
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-12-14
Authors: Fujiwara, T.
PDB entry 8xfr: Structure of the alginate epimerase/lyase complexed with tetra-mannuronic acid
Classification: ISOMERASE
Source organism: Azotobacter chroococcum NCIMB 8003
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-12-14
Authors: Fujiwara, T.
PDB entry 8xfs: LGR4-RSPO2-ZNRF3 RING domain (1:2:2)
Classification: MEMBRANE PROTEIN
Source organism: Camelus bactrianus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-12-14
Authors: Lu, W., Yong, G.
PDB entry 8xft: LGR4-RSPO2-ZNRF3(1:1:1)
Classification: MEMBRANE PROTEIN
Source organism: Camelus bactrianus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2023-12-14
Authors: Lu, W., Yong, G.
PDB entry 8xfu: DUF3055 from Staphylococcus aureus adopts unique strategy for structural distinctiveness
Classification: UNKNOWN FUNCTION
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 3.61 Å
Deposited: 2023-12-14
Authors: Kim, H.J.
PDB entry 8xfv: Crystal structure of human Golgi resident glutaminyl cyclase in complex with (Z)-3-((1H-benzo[d]imidazol-5-yl)methylene)-4-(piperidin-4-yloxy)indolin-2-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.13 Å
Deposited: 2023-12-14
Authors: Li, G.-B., Wang, X.-Y.
PDB entry 8xfw: Crystal structure of MiCGT(M148A/V190T/S121D) in complex with UDP
Classification: TRANSFERASE
Source organism: Mangifera indica
Experimental method: X-RAY DIFFRACTION
Resolution: 3.10006 Å
Deposited: 2023-12-14
Authors: Zhang, Z.M., Zhou, Z.Q.
PDB entry 8xfx: Archaeal exosome subcomplex (Rrp41-Rrp42)
Classification: HYDROLASE
Source organism: Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-12-14
Authors: Kim, H.S., Park, S.H., Kim, S.H., Hwang, K.Y.
PDB entry 8xfy: The Crystal Structure of RSK2 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-12-14
Authors: Wang, F., Cheng, W., Lv, Z., Lin, D., Pan, W.
PDB entry 8xfz: The structure of HLA-A/L1-2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2023-12-14
Authors: Zhang, J.N., Yue, C., Liu, J.
PDB entry 8xg1: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Korea/426/1968 H2N2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2023-12-14
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xg2: The structure of HLA-A/Pep14
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2023-12-14
Authors: Zhang, J.N., Yue, C., Liu, J.
PDB entry 8xg4: X-ray crystal structure of streptavidin flash-cooled in 30% glycerol at ambient pressure
Classification: CYTOSOLIC PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2023-12-15
Authors: Higashiura, A., Yamamoto, A., Sugiyama, S.
PDB entry 8xg5: X-ray crystal structure of streptavidin flash-cooled in 30% PEG1000 at ambient pressure
Classification: CYTOSOLIC PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-12-15
Authors: Higashiura, A., Yamamoto, A., Sugiyama, S.
PDB entry 8xg6: X-ray crystal structure of Streptavidine without cryo-protectant using a high-pressure cryocooling method
Classification: CYTOSOLIC PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2023-12-15
Authors: Higashiura, A., Yamamoto, A., Sugiyama, S.
PDB entry 8xg7: Crystal structure of phenylacetone monooxygenase mutant PM1 bound to FAD and NADP
Classification: OXIDOREDUCTASE
Source organism: Thermobifida fusca YX
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-12-15
Authors: Li, X., Sun, Z.T.
PDB entry 8xg8: Crystal structure of phenylacetone monooxygenase mutant PM2 bound to FAD and NADP
Classification: OXIDOREDUCTASE
Source organism: Thermobifida fusca YX
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2023-12-15
Authors: Li, X., Sun, Z.T.
PDB entry 8xg9: Crystal structure of phenylacetone monooxygenase mutant PM3 bound to FAD and NADP
Classification: OXIDOREDUCTASE
Source organism: Thermobifida fusca YX
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-12-15
Authors: Li, X., Sun, Z.T.
PDB entry 8xga: Crystal structure of human Golgi resident glutaminyl cyclase in complex with (Z)-3-((1H-benzo[d]imidazol-5-yl)methylene)-4-((tetrahydro-2H-pyran-4-yl)oxy)indolin-2-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.537 Å
Deposited: 2023-12-15
Authors: Li, G.-B., Wang, X.-Y.
PDB entry 8xgb: Crystal structure of human secretory glutaminyl cyclase in complex with (S)-1-(1H-benzo[d]imidazol-5-yl)-5-(4-propoxyphenyl)imidazolidin-2-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.24 Å
Deposited: 2023-12-15
Authors: Li, G.-B., Wang, X.-Y.
PDB entry 8xgc: Structure of yeast replisome associated with FACT and histone hexamer, Composite map
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-12-15
Authors: Li, N., Gao, Y., Yu, D., Gao, N., Zhai, Y.
PDB entry 8xgd: Human Cx36/GJD2 gap junction channel with pore-lining N-terminal helices in porcine brain lipids.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-12-15
Authors: Cho, H.J., Lee, H.H.
PDB entry 8xge: Human Cx36/GJD2 gap junction channel in porcine brain lipids.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2023-12-15
Authors: Cho, H.J., Lee, H.H.
PDB entry 8xgf: Human Cx36/GJD2 gap junction channel in complex with arachidonic acid.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-12-15
Authors: Cho, H.J., Lee, H.H.
PDB entry 8xgg: Human Cx36/GJD2 gap junction channel in complex with 1-hexanol.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-12-15
Authors: Cho, H.J., Lee, H.H.
PDB entry 8xgj: Human Cx36/GJD2 gap junction channel in complex with mefloquine.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-12-15
Authors: Cho, H.J., Lee, H.H.
PDB entry 8xgk: Optimization Efforts for Identification of Novel Highly Potent Keap1-Nrf2 Protein-Protein Interaction Ihhibitors
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2023-12-15
Authors: Otake, K., Hara, Y., Ubukata, M., Inoue, M., Nagahashi, N., Motoda, D., Ogawa, N., Hantani, Y., Hantani, R., Adachi, T., Nomura, A., Yamaguchi, K., Maekawa, M., Mamada, H., Motomura, T., Sato, M., Harada, K.
PDB entry 8xgl: Structure of the Magnaporthe oryzae effector NIS1
Classification: PROTEIN BINDING
Source organism: Pyricularia oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-12-15
Authors: Han, R., Wang, D., Zhang, X., Liu, J.
PDB entry 8xgm: Cryo-EM structure of human GPR1 bound to chemerin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-12-15
Authors: Liu, A.J., Liu, Y.Z., Ye, R.D.
PDB entry 8xgo: a peptide receptor complex structure
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2023-12-15
Authors: Wu, Z., Du, Y., Chen, G.
PDB entry 8xgp: Solution NMR structure of an antiparallel chair-type G-quadruplex from NOP56 intron
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2023-12-15
Authors: Yan, Z., Guo, P., Han, D.
PDB entry 8xgq: The co-crystal structure of LtpM with UDP
Classification: TRANSFERASE
Source organism: Legionella pneumophila subsp. pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2023-12-15
Authors: Wei, T., Xiao, J.
PDB entry 8xgr: ETB-eGt complex bound to endothelin-1
Classification: PEPTIDE BINDING PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Homo sapiens; Lama glama; Rattus rattus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-12-15
Authors: Oshima, H.S., Sano, F.K., Akasaka, H., Iwama, A., Shihoya, W., Nureki, O.
PDB entry 8xgs: a peptide receptor complex structure
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-12-15
Authors: Wu, Z., Du, Y., Chen, G.
PDB entry 8xgt: Crystal structure of human secretory glutaminyl cyclase in complex with (Z)-3-((1H-benzo[d]imidazol-5-yl)methylene)-4-hydroxyindolin-2-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.813 Å
Deposited: 2023-12-15
Authors: Li, G.-B., Wang, X.-Y.
PDB entry 8xgu: a peptide receptor complex structure
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-12-15
Authors: Wu, Z., Du, Y., Chen, G.
PDB entry 8xgv: Optimization Efforts for Identification of Novel Highly Potent Keap1-Nrf2 Protein-Protein Interaction (PPI) Inhibitors
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-12-15
Authors: Otake, K., Hara, Y., Ubukata, M., Inoue, M., Nagahashi, N., Motoda, D., Ogawa, N., Hantani, Y., Hantani, R., Adachi, T., Nomura, A., Yamaguchi, K., Maekawa, M., Mamada, H., Motomura, T., Sato, M., Harada, K.
PDB entry 8xgw: Solution structure of d(CGATCG)2-Baicalein complex
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2023-12-15
Authors: Nair, M.S., Kumar, S.
PDB entry 8xgx: beta-1,4-galacosyltransferase
Classification: TRANSFERASE
Source organism: Aggregatibacter actinomycetemcomitans NUM4039
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2023-12-15
Authors: Luo, G., Huang, Z., Chen, J., Hou, X., Zhu, Y., Ni, D., Xu, W., Zhang, W., Rao, Y., Mu, W.
PDB entry 8xgy: Crystal structure of human Golgi resident glutaminyl cyclase in complex with (R,Z)-3-((1H-benzo[d]imidazol-5-yl)methylene)-4-((1-acetylpyrrolidin-3-yl)oxy)indolin-2-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2023-12-16
Authors: Li, G.-B., Wang, X.-Y.
PDB entry 8xgz: Crystal structure of a sulfotransferase S4 in complex with PAP
Classification: TRANSFERASE
Source organism: Bambusicola thoracicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2023-12-16
Authors: Gao, J., Yin, L., Liu, W.D., Li, J.S.
PDB entry 8xh0: Monoclinic crystal structure of green fluorescent protein nowGFP at pH 4.8
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-12-16
Authors: Kim, C.U., Kim, J.K.
PDB entry 8xh1: Orthorhombic crystal structure of green fluorescent protein nowGFP at pH 9.0
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-12-16
Authors: Kim, C.U., Kim, J.K.
PDB entry 8xh2: Orthorhombic crystal structure of green fluorescent protein nowGFP at pH 6.0
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-12-16
Authors: Kim, C.U., Kim, J.K.
PDB entry 8xh6: Structure of EBV LMP1 dimer
Classification: VIRAL PROTEIN
Source organism: human gammaherpesvirus 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2023-12-17
Authors: Gao, P., Huang, J.F.
PDB entry 8xh7: Structure of EBV LMP1 oligomer
Classification: VIRAL PROTEIN
Source organism: human gammaherpesvirus 4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2023-12-17
Authors: Gao, P., Huang, J.F.
PDB entry 8xh8: Human Cx36/GJD2 (Ala14-deleted mutant) gap junction channel in porcine brain lipids
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-12-17
Authors: Cho, H.J., Lee, H.H.
PDB entry 8xh9: Human Cx36/GJD2 (Ala14 deletion mutant) gap junction channel prepared with mefloquine, showing no bound mefloquine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2023-12-17
Authors: Cho, H.J., Lee, H.H.
PDB entry 8xha: Crystal structure of alpha-Oxoamine Synthase Alb29 with PLP cofactor and L-glutamate
Classification: TRANSFERASE
Source organism: Streptomyces albogriseolus 1-36
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2023-12-17
Authors: Xu, M.J., Zhang, D.K.
PDB entry 8xhd: Crystal structure of alpha-Oxoamine Synthase Alb29 with PLP cofactor and L-glutamate
Classification: TRANSFERASE
Source organism: Streptomyces albogriseolus 1-36
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-12-17
Authors: Xu, M.J., Zhang, D.K.
PDB entry 8xhe: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-12-17
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xhf: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2023-12-17
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xhg: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2023-12-17
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xhh: Dual receptor-binding, infectivity, and transmissibility of an emerging H2N2 avian influenza virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.38 Å
Deposited: 2023-12-17
Authors: Sun, J., Zheng, T.Y.
PDB entry 8xhj: Crystal structure of AtHPPD-HBA complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.187 Å
Deposited: 2023-12-17
Authors: Dong, J., Lin, H.-Y., Yang, G.-F.
PDB entry 8xhk: Crystal structure of alpha-Oxoamine Synthase Alb29 with PLP cofactor
Classification: TRANSFERASE
Source organism: Streptomyces albogriseolus 1-36
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2023-12-18
Authors: Xu, M.J., Zhang, D.K.
PDB entry 8xhm: Crystal structure of Nocardia seriolae dUTP diphosphatase
Classification: HYDROLASE
Source organism: Nocardia seriolae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2023-12-18
Authors: Weng, J., Wei, Z.
PDB entry 8xho: Deep sea bacterial PET plastic hydrolase MtCut with mutation S178C
Classification: HYDROLASE
Source organism: Marinactinospora thermotolerans DSM 45154
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-12-18
Authors: Yang, J.
PDB entry 8xhp: The apo structure of SsBcmC
Classification: OXIDOREDUCTASE
Source organism: Streptomyces cinnamoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86001 Å
Deposited: 2023-12-18
Authors: Wu, L., Tang, G.L., Zhou, J.H.
PDB entry 8xhq: The complex structure of SoBcmC and its natural substrate
Classification: OXIDOREDUCTASE
Source organism: Streptomyces ossamyceticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.90001 Å
Deposited: 2023-12-18
Authors: Wu, L., Tang, G.L., Zhou, J.H.
PDB entry 8xhr: Crystal structure of Mycobacterium tuberculosis MenT3 bound with CTP
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-12-18
Authors: Liu, J., Yashiro, Y., Tomita, K.
PDB entry 8xhs: Cryo-EM structure of free-state KmAgo
Classification: DNA BINDING PROTEIN
Source organism: Kurthia massiliensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2023-12-18
Authors: Tao, X., Ding, H., Wu, S.
PDB entry 8xht: The apo structure of PaBcmG
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81954 Å
Deposited: 2023-12-18
Authors: Wu, L., Tang, G.L., Zhou, J.H.
PDB entry 8xhu: Crystal structure of Helicobacter pylori IspDF
Classification: TRANSFERASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-12-18
Authors: Chen, X., Wu, D.
PDB entry 8xhv: Structure of the Argonaute protein from Kurthia massiliensis in complex with guide DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Kurthia massiliensis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2023-12-18
Authors: Tao, X., Ding, H., Wu, S.
PDB entry 8xhw: Haloquadratum walsbyi middle rhodopsin mutant - D84N
Classification: MEMBRANE PROTEIN
Source organism: Haloquadratum walsbyi DSM 16790
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2023-12-18
Authors: Ko, L.N., Lim, G.Z., Li, G.Y., Chen, J.C., Yang, C.S.
PDB entry 8xhx: The complex structure of PaBcmG and its natural substrate
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-12-18
Authors: Wu, L., Tang, G.L., Zhou, J.H.
PDB entry 8xhy: The complex structure of mutant T307A of SsBcmE and its natural substrate cIL
Classification: OXIDOREDUCTASE
Source organism: Streptomyces cinnamoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71002 Å
Deposited: 2023-12-18
Authors: Wu, L., Tang, G.L., Zhou, J.H.
PDB entry 8xi1: Cellodextrin phosphorylase from Clostridium thermocellum mutant - all cysteine residues were substituted with serines
Classification: CARBOHYDRATE
Source organism: Acetivibrio thermocellus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2023-12-19
Authors: Kuga, T., Sunagawa, N., Igarashi, K.
PDB entry 8xi2: Cryo-EM structure of the Chlamydomonas C* complex
Classification: SPLICING
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-12-19
Authors: Lu, Y., Zhan, X.
PDB entry 8xi3: Structure of mouse SCMC-14-3-3gama complex
Classification: CYTOSOLIC PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-12-19
Authors: Chi, P., Han, Z., Jiao, H., Li, J., Wang, X., Hu, H., Deng, D.
PDB entry 8xi4: Structure of Eastern Equine Encephalitis VLP in complex with the receptor VLDLR LA1-2
Classification: VIRAL PROTEIN
Source organism: Eastern equine encephalitis virus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-12-19
Authors: Cao, D., Ma, B., Cao, Z., Xu, X., Zhang, X., Xiang, Y.