LiteFold/PDB huggingface dataset:
PDB entry 9gr0: Interaction with AK2A links AIFM1 to cellular energy metabolism. The cryo-EM structure of dimeric AIFM1 bound by AK2A.
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-09-10
Authors: Rothemann, R.A., Pavlenko, E.A., Gerlich, S., Grobushkin, P., Mostert, S., Stobbe, D., Racho, J., Stillger, K., Lapacz, K., Petrungaro, C., Dengjel, J., Neundorf, I., Bano, D., Mondal, M., Weiss, K., Ehninger, D., Nguyen, T.H.D., Poepsel, S.P., Riemer, J.
PDB entry 9gr1: E. coli 70S-TEC complex in delivery state
Classification: GENE REGULATION
Source organism: Escherichia coli; Escherichia coli BL21(DE3); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-09-10
Authors: Webster, M.W., Weixlbaumer, A.
PDB entry 9gr3: The MK-RSL - sulfonato-calix[4]arene complex
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2024-09-10
Authors: Mockler, N.M., Ramberg, K.O., Flood, R.J., Crowley, P.B.
PDB entry 9gr4: The MKA-RSL - sulfonato-calix[4]arene complex
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2024-09-10
Authors: Mockler, N.M., Ramberg, K.O., Flood, R.J., Crowley, P.B.
PDB entry 9gr5: The MKAA-RSL - sulfonato-calix[4]arene complex
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2024-09-10
Authors: Mockler, N.M., Ramberg, K.O., Flood, R.J., Crowley, P.B.
PDB entry 9gr6: PsiM in complex with SAH, high resolution
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2024-09-10
Authors: Hudspeth, J., Rupp, B., Werten, S.
PDB entry 9gr7: PsiM in complex with sinefungin
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2024-09-10
Authors: Hudspeth, J., Rupp, B., Werten, S.
PDB entry 9gr8: Crystal structure of the N-terminal kinase domain from Saccharomyces cerevisiae Vip1 in complex with ADP.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2024-09-11
Authors: Lee, K., Raia, P., Hothorn, M.
PDB entry 9gr9: Homodimer of BACH1 BTB domain
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-09-11
Authors: Gutmann, S., Hinniger, A., Berneiser, K., Goretzki, B.
PDB entry 9gra: Homodimer of BACH1 BTB domain in complex with 2-Methyl-2,4-pentanediol
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-09-11
Authors: Gutmann, S., Hinniger, A., Goretzki, B.
PDB entry 9grb: Crystal structure of mouse Carboxylesterase 2b (Ces2b)
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-09-11
Authors: Rammer, L., Eisner, H., Sagmeister, T., Oberer, M.
PDB entry 9grc: Cryo-EM structure of lipoprotein-bound LolCDE in nanodiscs
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-09-11
Authors: Dong, H., Shen, C., Tang, X., Qiao, W.
PDB entry 9grd: Cryo-electron microscopy structure of glucose/xylose isomerase from Streptomyces rubiginosus with cobalt ions in the active site
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces rubiginosus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.99 Å
Deposited: 2024-09-11
Authors: Slawek, J., Klonecka, A., Rawski, M., Kozak, M.
PDB entry 9gre: Cryo-electron microscopy structure of glucose/xylose isomerase from Streptomyces rubiginosus with magnesium ions in the active site
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces rubiginosus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2024-09-11
Authors: Slawek, J., Klonecka, A., Rawski, M., Kozak, M.
PDB entry 9grf: Crystal structure of X409 complexed to tetra-Tn-glycopeptide
Classification: SUGAR BINDING PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2024-09-11
Authors: Veloz, B., Taleb, V., Hurtado-Guerrero, R.
PDB entry 9grg: StmPr1, Stenotrophomonas maltophilia Protease 1, 36 kDa alkine serine protease in complex with PMSF
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-09-11
Authors: Sommer, M., Outzen, L., Negm, A., Windhorst, S., Weber, W., Betzel, C.
PDB entry 9grh: Crystal structure of the C-terminal phosphatase domain from Saccharomyces cerevisiae Vip1 (apo)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-09-11
Authors: Raia, P., Lee, K., Hothorn, M.
PDB entry 9grj: Crystal structure of X409 complexed to penta-Tn-glycopeptide
Classification: SUGAR BINDING PROTEIN
Source organism: Escherichia coli; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-09-11
Authors: Veloz, B., Taleb, V., Hurtado-Guerrero, R.
PDB entry 9grk: Cdc42 Binding peptide (W14A)
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-09-11
Authors: Mott, H.R., Murphy, N.P., Owen, D.
PDB entry 9grl: Cdc42 binding peptide (W14A) with homocysteine
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-09-11
Authors: Mott, H.R., Owen, D., Murphy, N.P.
PDB entry 9grm: Cdc42 in complex with inhibitory peptide
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2024-09-11
Authors: Mott, H.R., Owen, D., Murphy, N.P.
PDB entry 9grn: Crystal structure of the engineered C-terminal phosphatase domain from Saccharomyces cerevisiae Vip1 (apo, loop deletion residues 848-918)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2024-09-11
Authors: Raia, P., Lee, K., Hothorn, M.
PDB entry 9gro: Crystal structure of the engineered C-terminal phosphatase domain from Saccharomyces cerevisiae Vip1 in complex with 1,5-InsP8 (phosphatase dead mutant, loop deletion residues 848-918)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2024-09-11
Authors: Raia, P., Hothorn, M.
PDB entry 9grp: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and beta-chloroethyl theophylline
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-12
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9grq: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and theophylline
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-09-12
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9grr: Crystal structure of Arabidopsis thaliana Acyl-ACP Thioesterase (At-FatA) complexed with Cinmethylin
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-09-12
Authors: Montgomery, M.G.
PDB entry 9grs: Crystal structure of HRP-2 PWWP domain in complex with compound 8
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-09-12
Authors: Osipov, E.M., Paulovcakova, T., Beelen, S., Vantieghem, T., Strelkov, S.V.
PDB entry 9grt: Crystal structure of HRP-2 PWWP domain in complex with compound 29
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-09-12
Authors: Osipov, E.M., Paulovcakova, T., Beelen, S., Vantieghem, T., Strelkov, S.V.
PDB entry 9gru: Crystal structure of HRP-2 PWWP domain in complex with compound 30
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-09-12
Authors: Osipov, E.M., Paulovcakova, T., Beelen, S., Vantieghem, T., Strelkov, S.V.
PDB entry 9grv: Crystal structure of HRP-2 PWWP domain in complex with compound 37
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-09-12
Authors: Osipov, E.M., Paulovcakova, T., Beelen, S., Vantieghem, T., Strelkov, S.V.
PDB entry 9grw: Structure of Heparinase I from Bacteroides eggerthii in complex with calcium cofactor
Classification: LYASE
Source organism: Bacteroides eggerthii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-09-12
Authors: Mycroft-West, C., Wu, L.
PDB entry 9grx: NDH-PSI-LHCI supercomplex from S. oleracea
Classification: ELECTRON TRANSPORT
Source organism: Spinacia oleracea
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2024-09-13
Authors: Introini, B., Hahn, A., Kuehlbrandt, W.
PDB entry 9gry: Cryo-EM structure of human SLC35B1-Q113F variant with AMP-PNP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-13
Authors: Gulati, A., Ahn, D., Suades, A., Drew, D.
PDB entry 9grz: Cryo-EM structure of human SLC35B1 with AMP-PNP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-09-13
Authors: Gulati, A., Ahn, D., Suades, A., Drew, D.
PDB entry 9gs0: Capsid of full Haloferax tailed virus 1 without turret head protein gp31.
Classification: VIRUS
Source organism: Haloferax tailed virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2024-09-13
Authors: Zhang, D., Daum, B., Isupov, M.N., McLaren, M., Stuart, W.
PDB entry 9gs1: Crystal structure of Arabidopsis thaliana Acyl-ACP Thioesterase (At-FatA) complexed with Oxaziclomefone
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-09-13
Authors: Montgomery, M.G.
PDB entry 9gs2: Structure of the Rieske bound Apo1 state of the heptameric Bcs1 AAA-ATPase
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2024-09-13
Authors: Rosales-Hernandez, C., Beckmann, R.
PDB entry 9gs3: Cryo-EM structure of human SLC35B1-E33A variant with ADP in inward facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-09-13
Authors: Gulati, A., Ahn, D., Suades, A., Drew, D.
PDB entry 9gs4: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and theophylline derivative LAS 54571130
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-13
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9gs5: Cryo-EM structure of human SLC35B1-E33A variant with ADP in outward facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-09-13
Authors: Gulati, A., Ahn, D., Suades, A., Drew, D.
PDB entry 9gs6: Crystal structure of fascin in complex with compound 4
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2024-09-13
Authors: Schuettelkopf, A.W.
PDB entry 9gs7: Cryo-EM structure of human SLC35B1-E33A variant with AMP-PNP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-09-13
Authors: Gulati, A., Ahn, D., Suades, A., Drew, D.
PDB entry 9gs9: Tn7016 PseCAST QCascade
Classification: RNA
Source organism: Pseudoalteromonas; Pseudoalteromonas agarivorans S816; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-09-13
Authors: Lampe, G.D., Liang, A.R., Zhang, D.J., Fernandez, I.S., Sternberg, S.H.
PDB entry 9gsa: Lys9DabMC6*a 1-Delta
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-09-13
Authors: Maglio, O., Lombardi, A., Chino, M., Pirro, F.
PDB entry 9gsc: Structure of RmlD from Trichomonas vaginalis is space group P212121
Classification: CYTOSOLIC PROTEIN
Source organism: Trichomonas vaginalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-09-14
Authors: Gabrielsen, M., Liu, Y.-C., Kamarainen, O., Acosta-Serrano, A., Mottram, J.C.
PDB entry 9gsd: Cryo-EM structure of mouse PMCA-NPTN complex captured in E2 state (BEF3)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-09-15
Authors: Vinayagam, D., Raunser, S., Sistel, O., Schulte, U., Constantin, C.E., Prumbaum, D., Zolles, G., Fakler, B.
PDB entry 9gse: Cryo-EM structure of mouse PMCA-NPTN complex captured in E1 state without calcium
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2024-09-15
Authors: Vinayagam, D., Raunser, S., Sistel, O., Schulte, U., Constantin, C.E., Prumbaum, D., Zolles, G., Fakler, B.
PDB entry 9gsf: Mouse PMCA-NPTN complex captured in E1-ATP state without calcium
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-09-15
Authors: Vinayagam, D., Raunser, S., Sistel, O., Schulte, U., Constantin, C.E., Prumbaum, D., Zolles, G., Fakler, B.
PDB entry 9gsg: Cryo-EM structure of mouse PMCA-NPTN complex captured in E2-Pi state (ALF4)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-09-15
Authors: Vinayagam, D., Raunser, S., Sistel, O., Schulte, U., Constantin, C.E., Prumbaum, D., Zolles, G., Fakler, B.
PDB entry 9gsh: Cryo-EM structure of PMCA-NPTN complex captured in E1-Ca-ATP state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2024-09-15
Authors: Vinayagam, D., Raunser, S., Sistel, O., Schulte, U., Constantin, C.E., Prumbaum, D., Zolles, G., Fakler, B.
PDB entry 9gsi: Cryo-EM structure of mouse PMCA captured in E1-ATP in the presence of Calcium
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2024-09-16
Authors: Vinayagam, D., Raunser, S., Sistel, O., Schulte, U., Constantin, C.E., Prumbaum, D., Zolles, G., Fakler, B.
PDB entry 9gsj: BmrA E504A in complex with Hoechst33342
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-09-16
Authors: Moissonnier, L., Zarkadas, E., Schoehn, G., Falson, P., Chaptal, V.
PDB entry 9gsk: CSP1 H36A plus imidazole
Classification: METAL BINDING PROTEIN
Source organism: Methylosinus trichosporium OB3b
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-09-16
Authors: Basle, A., David, S., Dennison, C.
PDB entry 9gsl: Cryo-EM structure of human SLC35B1 in inward facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-09-16
Authors: Gulati, A., Ahn, D., Suades, A., Drew, D.
PDB entry 9gsm: Crystal structure of X409 complexed to tetra-core1-glycopeptide
Classification: SUGAR BINDING PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-09-16
Authors: Veloz, B., Taleb, V., Hurtado-Guerrero, R.
PDB entry 9gsn: Structure of the ATPgS-S1 state of the heptameric Bcs1 AAA-ATPase
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2024-09-16
Authors: Rosales-Hernandez, C., Beckmann, R.
PDB entry 9gso: DNA binding domain of J-DNA Binding Protein 3 (JBP3)
Classification: TRANSCRIPTION
Source organism: Leishmania tarentolae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.615 Å
Deposited: 2024-09-16
Authors: de Vries, I., Adamopoulos, A., Joosten, R.P., Perrakis, A.
PDB entry 9gsp: Structure of uncleaved Influenza A/Victoria/2570/2019 Haemagglutinin. The 2021 Influenza A(H1N1)pdm09 egg-derived vaccine candidate.
Classification: VIRAL PROTEIN
Source organism: H1N1 subtype
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2024-09-16
Authors: Waraich, K., Meir, A., Petrov, F., Akbar, S., Smith, T., Anne Scott, K., Dibben, O., Bhella, D.
PDB entry 9gsq: DNA binding domain of J-DNA Binding Protein 3 (JBP3)
Classification: TRANSCRIPTION
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-09-16
Authors: de Vries, I., Adamopoulos, A., Joosten, R.P., Perrakis, A.
PDB entry 9gsr: Crystal Structure of M. hassiacum GPGS co-crystallized with UDP-Glucose (pH 7.2)
Classification: TRANSFERASE
Source organism: Mycolicibacterium hassiacum DSM 44199
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-09-16
Authors: Macedo-Ribeiro, S., Nunes-Costa, D., Silva, A., Pereira, P.J.B.
PDB entry 9gss: HUMAN GLUTATHIONE S-TRANSFERASE P1-1, COMPLEX WITH S-HEXYL GLUTATHIONE
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 1997-08-14
Authors: Oakley, A., Parker, M.
PDB entry 9gst: LN02-ML85 Fab in complex with crosslinked DS-SOSIP HIV-1 Env trimer
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-09-16
Authors: Pedenko, B., Effantin, G., Weissenhorn, W.
PDB entry 9gsu: Structure of PP1-Neurabin bound to 4E-BP1.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2024-09-16
Authors: Mouilleron, S., Treisman, R., Fedoryshchak, R., Elbouri, K.
PDB entry 9gsv: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with iminosugar compound 4c
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-09-16
Authors: Sulzenbacher, G., Roig-Zamboni, V., Moracci, M., Parenti, G., Py, S.
PDB entry 9gsw: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with iminosugar compound 4d
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-09-16
Authors: Sulzenbacher, G., Roig-Zamboni, V., Moracci, M., Parenti, G., Py, S.
PDB entry 9gsx: Campylobacter hook-filament junction-cap complex
Classification: TRANSPORT PROTEIN
Source organism: Campylobacter jejuni
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2024-09-16
Authors: Qin, K., Gonzalez-Rodriguez, N., Shmakova, E., Beeby, M., Bergeron, J.R.C.
PDB entry 9gsy: Cryo-EM structure of mouse PMCA captured in E2-P state (BEF3)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2024-09-16
Authors: Vinayagam, D., Raunser, S., Sistel, O., Schulte, U., Constantin, C.E., Prumbaum, D., Zolles, G., Fakler, B.
PDB entry 9gsz: Human monocarboxylate transporter 10 bound to L-thyroxine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-09-16
Authors: Coscia, F., Tassinari, M.
PDB entry 9gt0: DTPAA CHIP EXPERIMENT, ID29, X,Y SPACING 100,100
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gt1: DTPAA CHIP EXPERIMENT, ID29, X,Y SPACING 75,75
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gt2: DTPAA CHIP EXPERIMENT, ID29, X,Y SPACING 50,50
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gt3: DTPAA CHIP EXPERIMENT, ID29, X,Y SPACING 25,100
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gt4: DTPAA CHIP EXPERIMENT, ID29, X,Y SPACING 25,75
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gt5: DTPAA CHIP EXPERIMENT, ID29, X,Y SPACING 25,50
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gt6: DTPAA CHIP EXPERIMENT, ID29, X,Y SPACING 25,25
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gt7: DTPAA CHIP EXPERIMENT, ID29, X,Y SPACING 15,100
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gt8: DTPAA CHIP EXPERIMENT, CRISTALLINA, X,Y SPACING 100,100
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gt9: Re-refinement of Damage Free Ferric State of Dye Type Peroxidase Aa from Streptomyces lividans.
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.883 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gta: Reprocessing and re-refinement of Damage Free Ferric State of Dye Type Peroxidase Aa from Streptomyces lividans
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-09-17
Authors: Gorel, A., Schlichting, I.
PDB entry 9gtb: Cryo-EM structure of Mouse PMCA-NPTN complex captured in E1-Ca state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-09-17
Authors: Vinayagam, D., Raunser, S., Sistel, O., Shulte, U., Constantin, C.E., Prubaum, D., Zolles, G., Fakler, B.
PDB entry 9gtc: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with iminosugar compound 4g
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2024-09-17
Authors: Sulzenbacher, G., Roig-Zamboni, V., Moracci, M., Parenti, G., Py, S.
PDB entry 9gtd: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with iminosugar compound 4i
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-09-17
Authors: Sulzenbacher, G., Roig-Zamboni, V., Moracci, M., Parenti, G., Py, S.
PDB entry 9gte: Crystal structure of TRIM21 PRY-SPRY domain bound to Suramin
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-09-17
Authors: Kim, Y., Knapp, S., Kraemer, A., Structural Genomics Consortium (SGC)
PDB entry 9gtf: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and theophylline derivative LAS 57256190
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-09-17
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9gtg: RIPK1 in complex with AZ""902
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-09-17
Authors: Petersen, J.
PDB entry 9gti: X-ray crystal structure of mouse NPTN N-terminal domain
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2024-09-17
Authors: Vinayagam, D., Raunser, S., Sistel, O., Shulte, U., Constantin, C.E., Prubaum, D., Zolles, G., Fakler, B.
PDB entry 9gtj: Chlorite dismutase from Pseudomonas sp.
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2024-09-18
Authors: Papageorgiou, A.C., Chronopoulou, E.G.
PDB entry 9gtk: KRAS in complex with DARPin 784_F5
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-18
Authors: Kapp, J.N., Verdurmen, W., Schaefer, J.V., Kopra, K., Nagy-Davidescu, G., Richard, E., Nokin, M.J., Ernst, P., Tamaskovic, R., Schwill, M., Degen, R., Scholl, C., Santamaria, D., Plueckthun, A.
PDB entry 9gtl: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with iminosugar compound 4j
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-18
Authors: Sulzenbacher, G., Roig-Zamboni, V., Moracci, M., Parenti, G., Py, S.
PDB entry 9gtn: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with iminosugar compound 4k
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-09-18
Authors: Sulzenbacher, G., Roig-Zamboni, V., Moracci, M., Parenti, G., Py, S.
PDB entry 9gto: NCS-1 bound to a FDA ligand 1
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-09-18
Authors: Munoz-Reyes, D., Miro-Rodriguez, C., Sanchez-Barrena, M.J.
PDB entry 9gtp: Cryo-EM structure of a contractile injection system in Streptomyces coelicolor, the baseplate complex in extended state applied 6-fold symmetry.
Classification: STRUCTURAL PROTEIN
Source organism: Streptomyces coelicolor A3(2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-09-18
Authors: Casu, B., Sallmen, J.W., Haas, P.E., Afanasyev, P., Xu, J., Schlimpert, S., Pilhofer, M.
PDB entry 9gtq: NavMs F208L Apo
Classification: MEMBRANE PROTEIN
Source organism: Magnetococcus marinus MC-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-18
Authors: Hollingworth, D., Wallace, B.A.
PDB entry 9gtr: Cryo-EM structure of a contractile injection system in Streptomyces coelicolor, the baseplate complex in extended state applied 3-fold symmetry.
Classification: STRUCTURAL PROTEIN
Source organism: Streptomyces coelicolor A3(2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-09-18
Authors: Casu, B., Sallmen, J.W., Hass, P.E., Afanasyev, P., Xu, J., Schlimpert, S., Pilhofer, M.
PDB entry 9gts: Cryo-EM structure of a contractile injection system in Streptomyces coelicolor, the cap portion in extended state.
Classification: STRUCTURAL PROTEIN
Source organism: Streptomyces coelicolor A3(2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-09-18
Authors: Casu, B., Sallmen, J.W., Hass, P.E., Afanasyev, P., Xu, J., Schlimpert, S., Pilhofer, M.
PDB entry 9gtt: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with iminosugar compound 4l
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-09-18
Authors: Sulzenbacher, G., Roig-Zamboni, V., Moracci, M., Parenti, G., Py, S.
PDB entry 9gtu: Collagen VI alpha 1, 2, 3 heterotrimer recombinant C terminal region. Local refinement.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-09-18
Authors: Godwin, A., Snee, M., Dajani, R., Becker, M., Roseman, A., Baldock, C.
PDB entry 9gtv: Crystal structure of RamR with Tyr59 replaced with para-boronophenylalanine (boronate form)
Classification: DNA BINDING PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2024-09-18
Authors: Longwitz, L., Brouwer, B., Thunnissen, A.M.W.H., Roelfes, G.
PDB entry 9gtw: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with iminosugar compound 3g
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-09-18
Authors: Sulzenbacher, G., Roig-Zamboni, V., Moracci, M., Parenti, G., Py, S.
PDB entry 9gtx: Structural and functional analysis of the Helicobacter pylori lipoprotein chaperone LolA
Classification: TRANSPORT PROTEIN
Source organism: Helicobacter pylori J99
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-09-18
Authors: Jaiman, D., Persson, K.
PDB entry 9gty: RIPK1 in complex with AZ""320
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.145 Å
Deposited: 2024-09-18
Authors: Petersen, J.
PDB entry 9gtz: Xenopus tropicalis Interleukin Enhancer-Binding Factor 3 (ILF3) and Interleukin Enhancer-Binding Factor 2 (ILF2) heterodimer.
Classification: RNA BINDING PROTEIN
Source organism: Xenopus tropicalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.531 Å
Deposited: 2024-09-18
Authors: Talbot, A.J., Mancini, E.J.
PDB entry 9gu0: Human adult muscle nAChR in resting state in detergent with alpha-bungarotoxin
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Bungarus multicinctus; Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-09-18
Authors: Li, A., Pike, A.C.W., Chi, G., Webster, R., Maxwell, S., Liu, W., Beeson, D., Sauer, D.B., Dong, Y.Y.
PDB entry 9gu1: Human adult muscle nAChR in resting state in nanodisc with alpha-bungarotoxin
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Bungarus multicinctus; Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2024-09-18
Authors: Li, A., Pike, A.C.W., Chi, G., Webster, R., Maxwell, S., Liu, W., Beeson, D., Sauer, D.B., Dong, Y.Y.
PDB entry 9gu2: Human adult muscle nAChR in desensitised state in nanodisc with 100 uM acetylcholine
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2024-09-18
Authors: Li, A., Pike, A.C.W., Chi, G., Webster, R., Maxwell, S., Liu, W., Beeson, D., Sauer, D.B., Dong, Y.Y.
PDB entry 9gu3: Human adult muscle nAChR in desensitised state in nanodisc with 1 mM acetylcholine
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-09-18
Authors: Li, A., Pike, A.C.W., Chi, G., Webster, R., Maxwell, S., Liu, W., Beeson, D., Sauer, D.B., Dong, Y.Y.
PDB entry 9gu4: Crystal structure of NLRP3 in complex with inhibitor NP3-253
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.696 Å
Deposited: 2024-09-18
Authors: Srinivas, H.
PDB entry 9gu5: Crystal Structure of Hfq V22A
Classification: HYDROLASE
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-09-18
Authors: McQuail, J., Krepl, M., Katsuya-Gaviria, K., Tabib-Salazar, A., Burchell, L., Bischler, T., Grafenhan, T., Brear, P., Luisi, B.
PDB entry 9gu6: NCS-1 bound to FDA ligand 3
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-09-19
Authors: Munoz-Reyes, D., Sanchez-Barrena, M.J.
PDB entry 9gu7: Human carbonic anhydrase II complexed with N-phenyl-2-(1H-tetrazol-5-yl)acetamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-09-19
Authors: Angeli, A., Ferraroni, M.
PDB entry 9gu8: NCS-1 bound to a FDA ligand 4
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-09-19
Authors: Munoz-Reyes, D., Perez-Suarez, S., Sanchez-Barrena, M.J.
PDB entry 9gu9: Structure of the ATPgS-S2 state of the heptameric Bcs1 AAA-ATPase
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2024-09-19
Authors: Rosales-Hernandez, C., Beckmann, R.
PDB entry 9gua: NCS-1 bound to FDA ligand 5
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-09-19
Authors: Munoz-Reyes, D., Sanchez-Barrena, M.J.
PDB entry 9gub: SARS-CoV-2 Mac1 in complex with MCD-628
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2024-09-19
Authors: Duong, M., Paakkonen, J., Lehtio, L.
PDB entry 9guc: Adhiron-mediated Identification of a Novel and Selective Allosteric Pocket in Aurora Kinase A
Classification: TRANSFERASE
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-19
Authors: Roberts, J.P., Miles, J.A., Blinkhorne, F., Gaule, T.G., Bayliss, R.W., Johnson, C.A., Tomlinson, D.C.
PDB entry 9gud: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and theophylline derivative LAS 54570922
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-09-19
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9gue: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and theophylline derivative LAS 57256189
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-09-19
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9guf: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and theophylline derivative LAS 54571106
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-09-19
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9gug: Crystal structure of NtcA from S. elongatus in apo form A1
Classification: DNA BINDING PROTEIN
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-09-19
Authors: Llacer, J.L., Forcada-Nadal, A., Rubio, V.
PDB entry 9guh: Crystal structure of NtcA from S. elongatus in apo form B
Classification: DNA BINDING PROTEIN
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805
Experimental method: X-RAY DIFFRACTION
Resolution: 3.33 Å
Deposited: 2024-09-19
Authors: Llacer, J.L., Forcada-Nadal, A., Rubio, V.
PDB entry 9gui: Crystal structure of transcription factor NtcA from Synechococcus elongatus in complex with its target DNA.
Classification: DNA BINDING PROTEIN
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-09-19
Authors: Llacer, J.L., Forcada-Nadal, A., Rubio, V.
PDB entry 9guj: Crystal structure of transcription factor NtcA from Synechococcus elongatus in complex with its transcriptional co- activator PipX and its target DNA (Crystal II)
Classification: DNA BINDING PROTEIN
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.3 Å
Deposited: 2024-09-19
Authors: Llacer, J.L., Forcada-Nadal, A., Rubio, V.
PDB entry 9guk: Crystal structure of transcription factor NtcA from Synechococcus elongatus in complex with its transcriptional co- activator PipX and its target DNA (Crystal I)
Classification: DNA BINDING PROTEIN
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2024-09-19
Authors: Forcada-Nadal, A., Llacer, J.L., Rubio, V.
PDB entry 9gul: Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex
Classification: TRANSLATION
Source organism: Homo sapiens; Photinus pyralis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-09-19
Authors: Voisin, T.B., Pellowe, G.A., Balchin, D.
PDB entry 9gum: Human carbonic anhydrase II complexed with N-phenethyl-2-(1H-tetrazol-5-yl)acetamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-09-19
Authors: Angeli, A., Ferraroni, M.
PDB entry 9gun: Structure of a Putative Cyclodipeptide synthase from Porphyromonas gingivalis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Porphyromonas gingivalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-09-19
Authors: Ogilvie, C.E., Harding, C.J., Czekster, C.M.
PDB entry 9guo: Human carbonic anhydrase II complexed with 2-(1H-tetrazol-5-yl)acetic acid
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-09-20
Authors: Angeli, A., Ferraroni, M.
PDB entry 9gup: 30S mRNA delivery complex (open head)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-09-20
Authors: Rahil, H., Weixlbaumer, A., Webster, M.W.
PDB entry 9guq: 30S PIC (Pre-Initiation complex)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-09-20
Authors: Rahil, H., Weixlbaumer, A., Webster, M.W.
PDB entry 9gur: 30S mRNA delivery complex TEC resolved (TEC only)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-09-20
Authors: Rahil, H., Weixlbaumer, A., Webster, M.W.
PDB entry 9gus: 30S mRNA delivery complex TEC resolved (30S only)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-09-20
Authors: Rahil, H., Weixlbaumer, A., Webster, M.W.
PDB entry 9gut: 30S mRNA delivery complex (bS1 resolved)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-09-20
Authors: Rahil, H., Weixlbaumer, A., Webster, M.W.
PDB entry 9guu: 30S mRNA delivery complex (consensus)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-09-20
Authors: Rahil, H., Weixlbaumer, A., Webster, M.W.
PDB entry 9guv: 30S mRNA delivery complex (closed-head)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-09-20
Authors: Rahil, H., Webster, M.W., Weixlbaumer, A.
PDB entry 9guw: 30S-TEC (TEC in expressome position) Inactive state 2
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-09-20
Authors: Rahil, H., Weixlbaumer, A., Webster, M.W.
PDB entry 9gux: 30S-TEC (TEC in expressome position) Inactive state 1
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-09-20
Authors: Rahil, H., Weixlbaumer, A., Webster, M.W.
PDB entry 9guy: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and theophylline derivative LAS 54571098
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-20
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9guz: NCS-1 bound to FDA ligand 2
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-09-20
Authors: Munoz-Reyes, D., Sanchez-Barrena, M.J.
PDB entry 9gv1: NavMs F208L bound to sevoflurane
Classification: MEMBRANE PROTEIN
Source organism: Magnetococcus marinus MC-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-20
Authors: Hollingworth, D., Wallace, B.A.
PDB entry 9gv2: Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the covalently bound inhibitor FP237 (compound 8p in publication)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2024-09-20
Authors: Strater, N., Sylvester, K., Muller, C.E., Flury, P., Kruger, N., Breidenbach, J., Guetschow, M., Laufer, S.A., Pillaiyar, T.
PDB entry 9gv3: Crystal structure of the complex between Nb474 mutant R53A,D125A and Trypanosoma congolense fructose-1,6-bisphosphate aldolase
Classification: LYASE
Source organism: Trypanosoma congolense IL3000; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.751 Å
Deposited: 2024-09-21
Authors: McNae, I.W., Dornan, J., Walkinshaw, M.D.
PDB entry 9gv4: TBA G-quadruplex binding nanobody (free form)
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.534 Å
Deposited: 2024-09-21
Authors: Pevec, M., Hadzi, S.
PDB entry 9gv5: Human monocarboxylate transporter 8 D424N mutant
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-09-22
Authors: Tassinari, M., Coscia, F.
PDB entry 9gv6: Structure of TCR in complex with peptide-HLA
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2024-09-23
Authors: Karuppiah, V.
PDB entry 9gv7: Structure of reverse docking TCR in complex with peptide-HLA
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-09-23
Authors: Karuppiah, V.
PDB entry 9gv8: N-Acyl-D-amino-acid deacylase (D-acylase) from Klebsiella pneumoniae in the absence of glycerol
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae Kp13
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-09-23
Authors: Gavira, J.A., Martinez-Rodriguez, S.
PDB entry 9gv9: Structure of Heparinase I from Bacteroides eggerthii in complex with calcium cofactor and delta-UA(1-4)Glc 3, 6, N-Sulphated disaccharide
Classification: LYASE
Source organism: Bacteroides eggerthii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.715 Å
Deposited: 2024-09-23
Authors: Mycroft-West, C., Wu, L.
PDB entry 9gva: Crystal structure of the gamma carbonic anhydrase from Porphyromonas gingivalis
Classification: LYASE
Source organism: Porphyromonas gingivalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-09-23
Authors: Angeli, A., Ferraroni, M.
PDB entry 9gvb: Ruminococcus flavefaciens Coh-Doc complex between a group 2 Dockerin and the Cohesin from cell surface attached scaffoldin ScaE
Classification: PROTEIN BINDING
Source organism: Ruminococcus flavefaciens FD-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2024-09-23
Authors: Bule, P., Carvalho, A.L., Najmudin, S.
PDB entry 9gvc: Cryo-EM structure of Halothiobacillus neapolitanus alpha-carboxysome T=4 mini-shell containing CTD truncated mutant of CsoSCA
Classification: STRUCTURAL PROTEIN
Source organism: Halothiobacillus neapolitanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.82 Å
Deposited: 2024-09-23
Authors: Ng, P.C., Basle, A., Liu, L.N., Marles-Wright, J.
PDB entry 9gvd: Structure of phosphonate monoester hydrolase from Rhizobium leguminosarum with vanadate
Classification: HYDROLASE
Source organism: Rhizobium johnstonii 3841
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-09-24
Authors: Jonas, S., Hyvonen, M., Hollfelder, F.
PDB entry 9gve: Structure of phosphonate monoester hydrolase from Rhizobium leguminosarum with phenyl phosphonate
Classification: HYDROLASE
Source organism: Rhizobium johnstonii 3841
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2024-09-24
Authors: Jonas, S., Hyvonen, M., Hollfelder, F.
PDB entry 9gvf: Crystal structure of a computationally designed protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-09-24
Authors: Morris, E.F., Ward, T.R.
PDB entry 9gvg: P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus; Mycoplasmoides pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.06 Å
Deposited: 2024-09-24
Authors: Vizarraga, D., Marcos Silva, M., Martin Romero, J., Guerra, P., Fita, I., Pinyol, J.
PDB entry 9gvh: Crystal structure of Chitin Binding Protein from Iberis umbellata L.
Classification: PLANT PROTEIN
Source organism: Iberis umbellata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2024-09-24
Authors: Saeed, A., Betzel, C., Brognaro, H., Alves Franca, B., Mehmood, S., Rajaiah Prabhu, P., Ishaq, U., Akrem, A.
PDB entry 9gvi: Quadruplex-duplex hybrids (QDH) complex with PhenDC3 from PIM1 oncogene.
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-09-24
Authors: Ghosh, A., Lenarcic, M.Z., Trantirek, L., Harnos, J.
PDB entry 9gvj: MUC5AC mucin amino acids 28 to 1483
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2024-09-24
Authors: Haberman, M., Kamyshinsky, R., Fass, D.
PDB entry 9gvk: Cryo-EM structure of endogenous ATP-bound LolCDE with LolD-E171Q mutations in nanodiscs
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-09-25
Authors: Dong, H., Shen, C., Tang, X., Qiao, W.
PDB entry 9gvl: type-I interferons autoantibody pmab15 in complex with Interferon alpha-2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.006 Å
Deposited: 2024-09-25
Authors: Duquerroy, S., Rey, F., Mahevas, M., Chappert, P., Ahouzi, O.
PDB entry 9gvm: NNMT-SAH IN COMPLEX WITH 20p
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-09-25
Authors: Johansson, P.
PDB entry 9gvn: DEPEMOKIMAB FAB IN COMPLEX WITH INTERLEUKIN 5
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.933 Å
Deposited: 2024-09-25
Authors: Somers, D.O.