LiteFold/PDB huggingface dataset:
PDB entry 7ozp: RNA Polymerase II dimer (Class 3)
Classification: TRANSCRIPTION
Source organism: Sus scrofa domesticus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-06-28
Authors: Aibara, S., Dienemann, C., Cramer, P.
PDB entry 7ozq: Crystal structure of archaeal L7Ae bound to eukaryotic kink-loop
Classification: RIBOSOMAL PROTEIN
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2021-06-28
Authors: Hoefler, S., Lukat, P., Carlomagno, T., Blankenfeldt, W.
PDB entry 7ozr: Subtomogram average of authentic mumps virus nucleocapsid from HeLa cell lysate of long helical pitch
Classification: VIRUS
Source organism: Mumps virus genotype A
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2021-06-28
Authors: Mahamid, J., Zhang, X.
PDB entry 7ozs: Structure of the hexameric 5S RNP from C. thermophilum
Classification: RNA BINDING PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719); Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-06-28
Authors: Castillo, N., Thoms, M., Flemming, D., Hammaren, H.M., Buschauer, R., Ameismeier, M., Bassler, J., Beck, M., Beckmann, R., Hurt, E.
PDB entry 7ozt: Nanobodies restore stability to cancer-associated mutants of tumor suppressor protein p16INK4a
Classification: CELL CYCLE
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-06-28
Authors: Pastok, M.W., Burbidge, O., Itzhaki, L., Endicott, J.A., Noble, M.E.M.
PDB entry 7ozu: SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with A
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-06-28
Authors: Kabinger, F., Stiller, C., Schmitzova, J., Dienemann, C., Kokic, G., Hillen, H.S., Hoebartner, C., Cramer, P.
PDB entry 7ozv: SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with G
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-06-28
Authors: Kabinger, F., Stiller, C., Schmitzova, J., Dienemann, C., Kokic, G., Hillen, H.S., Hoebartner, C., Cramer, P.
PDB entry 7ozw: Cryo-EM structure of HIV-1 reverse transcriptase with a DNA aptamer in complex with fragment 166 at the transient P-pocket
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus type 1 BH10; Human immunodeficiency virus type 1 group M subtype B (isolate BH10); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2021-06-28
Authors: Singh, A.K., Das, K.
PDB entry 7ozx: Structure of human galactokinase 1 bound with azepan-1-yl(2,6-difluorophenyl)methanone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-06-29
Authors: Mackinnon, S.R., Bezerra, G.A., Zhang, M., Foster, W., Krojer, T., Brandao-Neto, J., Arrowsmith, C., Edwards, A., Bountra, C., Brennan, P., Lai, K., Yue, W.W.
PDB entry 7ozy: FGFR2 kinase domain (residues 461-763) in complex with 38.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2021-06-29
Authors: Trinh, C.H., Turner, L.D., Fishwick, C.W.G.
PDB entry 7ozz: The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG with LNA-amide modification
Classification: DNA-RNA HYBRID
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-06-29
Authors: Thorpe, C., Hardwick, J., McDonough, M.A., Hall, J.P., Baker, Y.R., El-Sagheer, A.H., Brown, T.
PDB entry 7p00: Human Neurokinin 1 receptor (NK1R) substance P Gq chimera (mGsqi) complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2021-06-29
Authors: Thom, C., Ehrenmann, J., Vacca, S., Waltenspuhl, Y., Schoppe, J., Medalia, O., Pluckthun, A.
PDB entry 7p01: Structure of the maltase BaAG2 from Blastobotrys adeninivorans in complex with acarbose
Classification: HYDROLASE
Source organism: Blastobotrys adeninivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2021-06-29
Authors: Ernits, K., Visnapuu, T., Persson, K.
PDB entry 7p02: Human Neurokinin 1 receptor (NK1R) substance P Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2021-06-29
Authors: Thom, C., Ehrenmann, J., Vacca, S., Waltenspuhl, Y., Schoppe, J., Medalia, O., Pluckthun, A.
PDB entry 7p03: Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation without nucleotides
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2021-06-29
Authors: Szewczak-Harris, A., Wagner, M., Du, D., Schmitt, L., Luisi, B.F.
PDB entry 7p04: Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2021-06-29
Authors: Szewczak-Harris, A., Wagner, M., Du, D., Schmitt, L., Luisi, B.F.
PDB entry 7p05: Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in inward-facing conformation with ADP/ATP and rhodamine 6G
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2021-06-29
Authors: Szewczak-Harris, A., Wagner, M., Du, D., Schmitt, L., Luisi, B.F.
PDB entry 7p06: Cryo-EM structure of Pdr5 from Saccharomyces cerevisiae in outward-facing conformation with ADP-orthovanadate/ATP
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2021-06-29
Authors: Szewczak-Harris, A., Wagner, M., Du, D., Schmitt, L., Luisi, B.F.
PDB entry 7p07: Structure of the maltase BaAG2 from Blastobotrys adeninivorans in complex with glucose
Classification: HYDROLASE
Source organism: Blastobotrys adeninivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2021-06-29
Authors: Ernits, K., Visnapuu, T., Persson, K.
PDB entry 7p08: Solution structure of the human SF3A1 ubiquitin-like domain
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-06-29
Authors: de Vries, T., Campagne, S., Allain, F.H.T.
PDB entry 7p09: Human mitochondrial Lon protease with substrate in the ATPase domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-06-29
Authors: Valentin Gese, G., Shahzad, S., Hallberg, B.M.
PDB entry 7p0a: CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH LCMV-DERIVED GP33 PEPTIDE with D-AMINOACID (p3P6f)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.429 Å
Deposited: 2021-06-29
Authors: Broggini, L., Ricagno, S.
PDB entry 7p0b: Human mitochondrial Lon protease without substrate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.11 Å
Deposited: 2021-06-29
Authors: Valentin Gese, G., Shahzad, S., Hallberg, B.M.
PDB entry 7p0c: URATE OXIDASE WITH 8-AZAXANTHINE UNDER 210 MPA PRESSURE
Classification: OXIDOREDUCTASE
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-06-29
Authors: Colloc'h, N., Prange, T., Girard, E.
PDB entry 7p0d: URATE OXIDASE WITH 8-AZAXANTHINE UNDER 310 MPA PRESSURE
Classification: OXIDOREDUCTASE
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-06-29
Authors: Colloc'h, N., Prange, T., Girard, E.
PDB entry 7p0e: Crystal structure of human filamin C domains 14-15 cardiovascular disease causing mutation G1676R
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-06-29
Authors: Mlynek, G., Djinovic-Carugo, K.
PDB entry 7p0f: Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor HTL0028125
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-06-29
Authors: Southall, S.M., Watson, S.P.
PDB entry 7p0g: URATE OXIDASE WITH 8-AZAXANTHINE UNDER AMBIENT PRESSURE
Classification: OXIDOREDUCTASE
Source organism: Aspergillus flavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-06-29
Authors: Colloc'h, N., Prange, T., Girard, E.
PDB entry 7p0h: Crystal structure of Helicobacter pylori ComF fused to an artificial alphaREP crystallization helper(named B2)
Classification: RECOMBINATION
Source organism: Helicobacter pylori (strain ATCC 700392 / 26695); Synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.499 Å
Deposited: 2021-06-29
Authors: Celma, L., Walbott, H., Legrand, P., Quevillon-Cheruel, S.
PDB entry 7p0i: Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor Compound 13
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-06-29
Authors: Southall, S.M.
PDB entry 7p0j: Crystal structure of S.pombe Mdb1 BRCT domains
Classification: SIGNALING PROTEIN
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2021-06-29
Authors: Day, M., Oliver, A.W., Pearl, L.H.
PDB entry 7p0k: Crystal structure of Autotaxin (ENPP2) with 18F-labeled positron emission tomography ligand
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-06-29
Authors: Salgado-Polo, F., Shao, T., Xiao, Z., Van, R., Chen, J., Rong, J., Haider, A., Shao, Y., Josephson, L., Perrakis, A., Liang, S.H.
PDB entry 7p0l: Crystal structure of S.pombe Mdb1 BRCT domains in complex with a H2A phosphopeptide
Classification: SIGNALING PROTEIN
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2021-06-29
Authors: Day, M., Oliver, A.W., Pearl, L.H.
PDB entry 7p0m: Human mitochondrial Lon protease with substrate in the ATPase and protease domains
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2021-06-30
Authors: Valentin Gese, G., Shahzad, S., Hallberg, B.M.
PDB entry 7p0n: Crystal structure of L-Trp/Indoleamine 2,3-dioxygenagse 1 (hIDO1) complex with the JK-loop refined in the open conformation
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-06-30
Authors: Mirgaux, M., Wouters, J.
PDB entry 7p0o: mitoNEET bound to M1 molecule
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-06-30
Authors: Livnah, O., Eisenberg-Domovich, Y., Marjault, H.B., Nechushtai, R.
PDB entry 7p0p: NAF-1 bound to M1 molecule
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-06-30
Authors: Livnah, O., Eisenberg-Domovich, Y., Marjault, H.B., Nechushtai, R.
PDB entry 7p0q: F(M197)H mutant structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV by fixed-target serial synchrotron crystallography (100K, 26keV)
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2021-06-30
Authors: Gabdulkhakov, A.G., Selikhanov, G.K., Guenther, S., Meents, A., Fufina, T.Y., Vasilieva, L.G.
PDB entry 7p0r: Crystal structure of L-Trp/Indoleamine 2,3-dioxygenase (hIDO1) complex with the JK-loop refined in the intermediate conformation
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-06-30
Authors: Mirgaux, M., Wouters, J.
PDB entry 7p0s: ORF virus encoded Bcl-2 homolog ORFV125 in complex with Puma BH3 peptide
Classification: APOPTOSIS
Source organism: Orf virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.50316 Å
Deposited: 2021-06-30
Authors: Suraweera, C.D., Hinds, M.G., Kvansakul, M.
PDB entry 7p0t: CRYSTAL STRUCTURE OF THE MURINE CLASS I MAJOR HISTOCOMPATIBILITY COMPLEX H-2DB IN COMPLEX WITH LCMV-DERIVED GP33 PEPTIDE with D-AMINOACID
Classification: IMMUNE SYSTEM
Source organism: Lymphocytic choriomeningitis mammarenavirus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.605 Å
Deposited: 2021-06-30
Authors: Broggini, L., Ricagno, S.
PDB entry 7p0u: ORF virus encoded Bcl-2 homolog ORFV125 in complex with Puma BH3 peptide
Classification: APOPTOSIS
Source organism: Orf virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99374 Å
Deposited: 2021-06-30
Authors: Suraweera, C.D., Hinds, M.G., Kvansakul, M.
PDB entry 7p0v: Crystal structure of human SF3A1 ubiquitin-like domain in complex with U1 snRNA stem-loop 4
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2021-06-30
Authors: Sabath, K., de Vries, T., Jonas, S.
PDB entry 7p0w: Crystal structure of a trapped Pab-AGOG/double-standed DNA covalent intermediate (DNA containing thymine opposite to lesion)
Classification: HYDROLASE
Source organism: Pyrococcus abyssi (strain GE5 / Orsay); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2021-06-30
Authors: Coste, F., Goffinont, S., Flament, D., Castaing, B.
PDB entry 7p0x: Crystal structure of Thioredoxin reductase from Brugia Malayi
Classification: OXIDOREDUCTASE
Source organism: Brugia malayi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-06-30
Authors: Fata, F., Ardini, M., Silvestri, I., Gabriele, F., Cheng, Q., Arner, E.S.J., Williams, D.L.
PDB entry 7p0y: Crystal Structure of mtbMGL K74A (Substrate Analog Complex)
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-06-30
Authors: Grininger, C., Aschauer, P., Pavkov-Keller, T., Oberer, M.
PDB entry 7p0z: 2.43 A Mycobacterium marinum EspB.
Classification: PROTEIN TRANSPORT
Source organism: Mycobacterium marinum (strain ATCC BAA-535 / M)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2021-07-01
Authors: Gijsbers, A., Zhang, Y., Vinciauskaite, V., Siroy, A., Ye, G., Tria, G., Mathew, A., Sanchez-Puig, N., Lopez-Iglesias, C., Peters, P.J., Ravelli, R.B.G.
PDB entry 7p11: Galectin-8 N-terminal carbohydrate recognition domain in complex with quinoline D-galactal ligand
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-07-01
Authors: Hassan, M., Hakansson, M., Nilsson, J.U., Kovacic, R.
PDB entry 7p12: DeNovoTIM13-SB, a de novo designed TIM barrel with a salt-bridge cluster
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2021-07-01
Authors: Kordes, S., Romero-Romero, S., Hocker, B.
PDB entry 7p13: 2.29 A Mycobacterium tuberculosis EspB.
Classification: PROTEIN TRANSPORT
Source organism: Mycobacterium tuberculosis H37RV
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2021-07-01
Authors: Gijsbers, A., Zhang, Y., Vinciauskaite, V., Siroy, A., Gao, Y., Tria, G., Mathew, A., Sanchez-Puig, N., Lopez-Iglesias, C., Peters, P.J., Ravelli, R.B.G.
PDB entry 7p14: Structure of full-length rXKR9 in complex with a sybody at 3.66A
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2021-07-01
Authors: Straub, M.S., Sawicka, M., Dutzler, R.
PDB entry 7p15: Cryo-EM structure of HIV-1 reverse transcriptase with a DNA aptamer in complex with fragment F04 at the transient P-pocket
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus type 1 BH10; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2021-07-01
Authors: Singh, A.K., Das, K.
PDB entry 7p16: Structure of caspase-3 cleaved rXKR9 in complex with a sybody at 4.3A
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-07-01
Authors: Straub, M.S., Sawicka, M., Dutzler, R.
PDB entry 7p17: F(M197)H mutant structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV by fixed-target serial synchrotron crystallography (room temperature, 12keV)
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2021-07-01
Authors: Gabdulkhakov, A.G., Selikhanov, G.K., Guenther, S., Meents, A., Fufina, T.Y., Vasilieva, L.G.
PDB entry 7p18: Crystal structure of 3-ketosteroid delta1-dehydrogenase from Sterolibacterium denitrificans in complex with 1,4-androstadiene-3,17-dione
Classification: OXIDOREDUCTASE
Source organism: Sterolibacterium denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2021-07-01
Authors: Wojcik, P., Mrugala, B., Kurpiewska, K., Szaleniec, M.
PDB entry 7p19: Crystal structure of SARS-CoV-2 RBD Q498Y complexed with human ACE2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.24 Å
Deposited: 2021-07-01
Authors: Erausquin, E., Lopez-Sagaseta, J.
PDB entry 7p1a: Carbonic Anhydrase VII Sultam Based Inhibitors
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2021-07-01
Authors: D'Ambrosio, K., De Simone, G.
PDB entry 7p1b: Apo structure of KDNase from Aspergillus Terrerus
Classification: CARBOHYDRATE
Source organism: Aspergillus terreus (strain NIH 2624 / FGSC A1156)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-07-01
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1c: Crystal structure of E.coli BamA beta-barrel in complex with darobactin B
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli O157:H7; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-07-01
Authors: Jakob, R.P., Modaresi, S.M., Hiller, S., Maier, T.
PDB entry 7p1d: Structure of KDNase from Aspergillus Terrerus in complex with 2-keto-3-deoxynononic acid
Classification: CARBOHYDRATE
Source organism: Aspergillus terreus (strain NIH 2624 / FGSC A1156)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2021-07-01
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1e: Structure of KDNase from Aspergillus Terrerus in complex with 2,3-difluoro-2-keto-3-deoxynononic acid
Classification: CARBOHYDRATE
Source organism: Aspergillus terreus (strain NIH 2624 / FGSC A1156)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2021-07-01
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1f: Structure of KDNase from Aspergillus terrerus in complex with 2,3-didehydro-2,3-dideoxy-D-glycero-D-galacto-nonulosonic acid.
Classification: CARBOHYDRATE
Source organism: Aspergillus terreus (strain NIH 2624 / FGSC A1156)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-07-01
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1g: Structure of the P. aeruginosa ExoY-F-actin complex
Classification: TOXIN
Source organism: Escherichia coli K-12; Oryctolagus cuniculus; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-07-01
Authors: Belyy, A., Merino, F., Raunser, S.
PDB entry 7p1h: Structure of the V. vulnificus ExoY-G-actin-profilin complex
Classification: TOXIN
Source organism: Escherichia coli (strain K12); Homo sapiens; Vibrio vulnificus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-07-01
Authors: Belyy, A., Merino, F., Raunser, S.
PDB entry 7p1i: Cryo EM structure of bison NHA2 in detergent and N-terminal extension helix
Classification: TRANSPORT PROTEIN
Source organism: Bison bison
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2021-07-01
Authors: Matsuoka, R., Fudim, R., Jung, S., Drew, D.
PDB entry 7p1j: Cryo EM structure of bison NHA2 in detergent structure
Classification: TRANSPORT PROTEIN
Source organism: Bison bison
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2021-07-01
Authors: Matsuoka, R., Fudim, R., Jung, S., Drew, D.
PDB entry 7p1k: Cryo EM structure of bison NHA2 in nano disc structure
Classification: TRANSPORT PROTEIN
Source organism: Bison bison
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2021-07-01
Authors: Matsuoka, R., Fudim, R., Jung, S., Drew, D.
PDB entry 7p1l: The MARK3 Kinase Domain Bound To AA-CS-1-008
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-07-01
Authors: Dederer, V., Preuss, F., Chatterjee, D., Vlassova, A., Mathea, S., Axtman, A., Knapp, S.
PDB entry 7p1m: Galectin-8 N-terminal carbohydrate recognition domain in complex with benzimidazole D-galactal ligand
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2021-07-02
Authors: Hassan, M., Hakansson, M., Nilsson, J.U., Kovacic, R.
PDB entry 7p1n: Crystal structure of human acetylcholinesterase in complex with (2R,3R,4S,5S,6R)-2-{4-[1-(4-{5-hydroxy-6-[(E)-(hydroxyimino)methyl]pyridin-2-yl}butyl)-1H-1,2,3-triazol-4-yl]butoxy}-6-(hydroxymethyl)oxane-3,4,5-triol oxime
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2021-07-02
Authors: Da Silva, O., Dias, J., Nachon, F.
PDB entry 7p1o: Structure of KDNase from Aspergillus Terrerus in complex with 2-keto-3-deoxynononic acid
Classification: CARBOHYDRATE
Source organism: Aspergillus terreus (strain NIH 2624 / FGSC A1156)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-07-02
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1p: Crystal structure of human acetylcholinesterase in complex with (E)-3-hydroxy-6-(3-(4-(4-(((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)butyl)-1H-1,2,3-triazol-1-yl)propyl)picolinaldehyde oxime
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2021-07-02
Authors: Ophelie, D.S., Jose, D., Florian, N.
PDB entry 7p1q: Structure of KDNase from Trichophyton Rubrum in complex with 2-keto-3-deoxynononic acid
Classification: CARBOHYDRATE
Source organism: Trichophyton rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 0.91 Å
Deposited: 2021-07-02
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1r: Structure of Trichophyton Rubrum KDNase in complex with 2,3-difluoro-KDN
Classification: CARBOHYDRATE
Source organism: Trichophyton rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-07-02
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1s: Structure of KDNase from Trichophyton Rubrum in complex with 2,3-didehydro-2,3-dideoxy-D-glycero-D-galacto-nonulosonic acid.
Classification: CARBOHYDRATE
Source organism: Trichophyton rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-07-02
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1t: Cryo-EM structure of encapsulin from Mycobacterium tuberculosis
Classification: VIRUS LIKE PARTICLE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2021-07-02
Authors: Lewis, C.J., Berger, C., Ravelli, R.B.G.
PDB entry 7p1u: Structure of KDNase from Trichophyton Rubrum in complex with 2-keto-3-deoxynononic acid
Classification: CARBOHYDRATE
Source organism: Trichophyton rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2021-07-02
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1v: Apo structure of KDNase from Trichophyton Rubrum
Classification: CARBOHYDRATE
Source organism: Trichophyton rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2021-07-02
Authors: Gloster, T.M., McMahon, S.A.
PDB entry 7p1w: Crystal structure of a R51 R53 double mutant of the DNA-binding protein RemA from Geobacillus thermodenitrificans
Classification: DNA BINDING PROTEIN
Source organism: Geobacillus thermodenitrificans (strain NG80-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-07-02
Authors: Altegoer, F., Mrusek, D., Bange, G.
PDB entry 7p1y: A small alarmone hydrolase TdActApo2 mutant - T78N
Classification: HYDROLASE
Source organism: Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2021-07-02
Authors: Jin, Y., Roth, C., Rizkallah, P.
PDB entry 7p1z: Novel GH12 endogluconase from Aspergillus cervinus
Classification: HYDROLASE
Source organism: Aspergillus cervinus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2021-07-03
Authors: Lazarenko, V.A., Rykov, S.V., Nikolaeva, A.Y., Berezina, O.V., Akentyev, F.I.
PDB entry 7p20: High resolution structure of the Juniperus ashei allergen - Jun a 3
Classification: ALLERGEN
Source organism: Juniperus ashei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-07-03
Authors: Eder, M., Hofer, G., Keller, W.
PDB entry 7p22: Thaumatin-like protein of Amycolatopsis rifamycinica
Classification: UNKNOWN FUNCTION
Source organism: Amycolatopsis rifamycinica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2021-07-03
Authors: Eder, M., Hofer, G., Odabas, M., Keller, W.
PDB entry 7p23: Thaumatin-like protein of Puccinia graminis
Classification: UNKNOWN FUNCTION
Source organism: Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-07-03
Authors: Eder, M., Hofer, G., Odabas, M., Keller, W.
PDB entry 7p24: Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT3177_S1_11)
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2021-07-03
Authors: Cartmell, A.
PDB entry 7p25: Crystal structure of Paradendryphiella salina PL7A alginate lyase in complex with hexa-mannuronic acid products
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2021-07-03
Authors: Fredslund, F., Welner, D.H., Wilkens, C.
PDB entry 7p26: Sulfated host glycan recognition by carbohydrate sulfatases of the human gut microbiota (BT4631_S1_15)
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2021-07-04
Authors: Cartmell, A.
PDB entry 7p27: NMR solution structure of Chikungunya virus macro domain
Classification: VIRAL PROTEIN
Source organism: Chikungunya virus (strain S27-African prototype)
Experimental method: SOLUTION NMR
Deposited: 2021-07-04
Authors: Lykouras, M.V., Tsika, A.C., Papageorgiou, N., Canard, B., Coutard, B., Bentrop, D., Spyroulias, G.A.
PDB entry 7p2b: Crystal structure of human gelsolin amyloid mutant A551P
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-07-05
Authors: Bollati, M., de Rosa, M.
PDB entry 7p2c: F(M197)H mutant structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV by fixed-target serial synchrotron crystallography (room temperature, 26keV)
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2021-07-05
Authors: Gabdulkhakov, A.G., Selikhanov, G.K., Guenther, S., Meents, A., Fufina, T.Y., Vasilieva, L.G.
PDB entry 7p2d: Structure of alphaMbeta2/Cd11bCD18 headpiece in complex with a nanobody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-07-05
Authors: Jensen, R.K., Andersen, G.R.
PDB entry 7p2e: Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2021-07-05
Authors: Itoh, Y., Khawaja, A., Singh, V., Rorbach, J., Amunts, A.
PDB entry 7p2f: Green-type copper-nitrite reductase from Sinorhizobium meliloti 2011
Classification: METAL BINDING PROTEIN
Source organism: Sinorhizobium meliloti 2011
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-07-05
Authors: Tolmie, C., Opperman, D.J., Ferroni, F.M.
PDB entry 7p2g: Identification of low micromolar SARS-CoV-2 Mpro inhibitors from hits identified by in silico screens
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-07-05
Authors: Rempel, S., Halazonetis, T.D.
PDB entry 7p2h: Dimethylated fusion protein of RSL and mussel adhesion peptide (Mefp) in complex with cucurbit[7]uril, H3 sheet assembly
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-07-06
Authors: Ramberg, K., Engilberge, S., Crowley, P.B.
PDB entry 7p2i: Dimethylated fusion protein of RSL and nucleoporin peptide (Nup) in complex with cucurbit[7]uril, F432 cage assembly
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.489 Å
Deposited: 2021-07-06
Authors: Guagnini, F., Ramberg, K., Crowley, P.B.
PDB entry 7p2j: Dimethylated fusion protein of RSL and trimeric coiled coil (4dzn) in complex with cucurbit[7]uril, H3 sheet assembly
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-07-06
Authors: Ramberg, K., Engilberge, S., Crowley, P.B.
PDB entry 7p2k: Solution NMR Structure of Arginine to Cysteine mutant of Arkadia RING domain.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-07-06
Authors: Raptis, V., Marousis, K.D., Birkou, M., Bentrop, D., Episkopou, V., Spyroulias, G.A.
PDB entry 7p2l: thermostabilised 7TM domain of human mGlu5 receptor bound to photoswitchable ligand alloswitch-1
Classification: SIGNALING PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2021-07-06
Authors: Huang, C.Y., Vinothkumar, K.R., Lebon, G.
PDB entry 7p2m: E.coli GyrB24 with inhibitor LMD43 (EBL2560)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2021-07-06
Authors: Stevenson, C.E.M., Lawson, D.M., Maxwell, A.M., Henderson, S.R., Kikelj, D., Durcik, M., Zega, A., Zidar, N., Ilas, J., Tomasic, T., Masic, L.P.
PDB entry 7p2n: E.coli GyrB24 with inhibitor LSJ38 (EBL2684)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2021-07-06
Authors: Stevenson, C.E.M., Lawson, D.M., Maxwell, A.M., Henderson, S.R., Kikelj, D., Zega, A., Zidar, N., Ilas, J., Tomasic, T., Masic, L.P.
PDB entry 7p2o: NMR solution structure of SUD-C domain of SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: SOLUTION NMR
Deposited: 2021-07-06
Authors: Gallo, A., Tsika, A.C., Fourkiotis, N.K., Spyroulias, G.A.
PDB entry 7p2p: Human Signal Peptidase Complex Paralog A (SPC-A)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2021-07-06
Authors: Liaci, A.M., Foerster, F.
PDB entry 7p2q: Human Signal Peptidase Complex Paralog C (SPC-C)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2021-07-06
Authors: Liaci, A.M., Foerster, F.
PDB entry 7p2r: Crystal structure of mouse PRMT6 in complex with inhibitor EML980
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-07-06
Authors: Bonnefond, L., Cavarelli, J.
PDB entry 7p2s: Crystal structure of Schistosoma mansoni HDAC8 in complex with a tricyclic thieno[3,2-b]indole capped hydroxamate-based inhibitor, chlorine derivative
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-07-06
Authors: Saccoccia, F., Gemma, S., Campiani, G., Ruberti, G.
PDB entry 7p2t: Tetartohedrally twinned crystal structure of Schistosoma mansoni HDAC8 in complex with a tricyclic thieno[3,2-b]indole capped hydroxamate-based inhibitor, bromine derivative
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-07-06
Authors: Saccoccia, F., Gemma, S., Campiani, G., Ruberti, G.
PDB entry 7p2u: Crystal structure of Schistosoma mansoni HDAC8 in complex with a 3-chlorophenyl-spiroindoline capped hydroxamate-based inhibitor, bound to a novel site
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-07-06
Authors: Saccoccia, F., Gemma, S., Campiani, G., Ruberti, G.
PDB entry 7p2v: Crystal structure of Schistosoma mansoni HDAC8 in complex with a 4-chlorophenyl-spiroindoline capped hydroxamate-based inhibitor, bound to a novel site
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-07-06
Authors: Saccoccia, F., Gemma, S., Campiani, G., Ruberti, G.
PDB entry 7p2w: E.coli GyrB24 with inhibitor LMD92 (EBL2682)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-07-06
Authors: Stevenson, C.E.M., Lawson, D.M., Maxwell, A.M., Henderson, S.R., Kikelj, D., Durcik, M., Zega, A., Zidar, N., Ilas, J., Tomasic, T., Masic, L.P.
PDB entry 7p2x: E.coli GyrB24 with inhibitor KOB20 (EBL2583)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-07-06
Authors: Stevenson, C.E.M., Lawson, D.M., Maxwell, A.M., Henderson, S.R., Kikelj, D., Benek, O., Zega, A., Zidar, N., Ilas, J., Tomasic, T., Masic, L.P.
PDB entry 7p2y: F1Fo-ATP synthase from Acinetobacter baumannii (state 1)
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-07-06
Authors: Demmer, J.K., Phillips, B.P., Uhrig, O.L., Filloux, A., Allsopp, L.P., Bublitz, M., Meier, T.
PDB entry 7p2z: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with cyclosulfamidate 4
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-07-06
Authors: Roig-Zamboni, V., Kok, K., Overkleeft, H., Artola, M., Sulzenbacher, G.
PDB entry 7p30: 3.0 A resolution structure of a DNA-loaded MCM double hexamer
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-07-06
Authors: Greiwe, J.F., Miller, T.C.R., Martino, F., Costa, A.
PDB entry 7p31: Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with NCL-00023818
Classification: CHAPERONE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2021-07-06
Authors: Mohamad, N., O'Donoghue, A., Kantsadi, A.L., Vakonakis, I.
PDB entry 7p32: Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with cyclosulfamidate 6
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2021-07-06
Authors: Roig-Zamboni, V., Kok, K., Overkleeft, H., Artola, M., Sulzenbacher, G.
PDB entry 7p33: Epstein-Barr virus encoded Bcl-2 homolog BHRF-1 in complex with Bid BH3 peptide
Classification: APOPTOSIS
Source organism: Epstein-Barr virus (strain B95-8); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78543 Å
Deposited: 2021-07-07
Authors: Suraweera, C.D., Hinds, M.G., Kvansakul, M.
PDB entry 7p34: Cryo-EM structure of the proton-dependent antibacterial peptide transporter SbmA-FabS11-1 in nanodiscs
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2021-07-07
Authors: Ghilarov, D., Beis, K.
PDB entry 7p35: Structure of the SARS-CoV-2 3CL protease in complex with rupintrivir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.256 Å
Deposited: 2021-07-07
Authors: Fabrega-Ferrer, M., Perez-Saavedra, J., Herrera-Morande, A., Coll, M.
PDB entry 7p36: X-ray structure of Lactobacillus kefir alcohol dehydrogenase (wild type)
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus kefiri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2021-07-07
Authors: Bischoff, D., Walla, B., Janowski, R., Niessing, D., Weuster-Botz, D.
PDB entry 7p37: Streptomyces coelicolor ATP-loaded NrdR
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces coelicolor A3(2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2021-07-07
Authors: Martinez-Carranza, M., Stenmark, P.
PDB entry 7p38: 4,6-alpha-glucanotransferase GtfB from Limosilactobacillus reuteri NCC 2613
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-07-07
Authors: Pijning, T., te Poele, E., Gangoiti, J., Boerner, T., Dijkhuizen, L.
PDB entry 7p39: 4,6-alpha-glucanotransferase GtfB from Limosilactobacillus reuteri NCC 2613 complexed with acarbose
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-07-07
Authors: Pijning, T., te Poele, E., Gangoiti, J., Boerner, T., Dijkhuizen, L.
PDB entry 7p3a: N-terminal domain of CGI-99
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-07-07
Authors: Kroupova, A., Jinek, M.
PDB entry 7p3b: Human RNA ligase RTCB in complex with GMP and Co(II)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-07-07
Authors: Kroupova, A., Ackle, F., Jinek, M.
PDB entry 7p3c: EED in complex with compound 4
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2021-07-07
Authors: Read, J.A.
PDB entry 7p3d: MHC I A02 Allele presenting YLQPRTFLL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2021-07-07
Authors: Rizkallah, P.J., Sewell, A.K., Wall, A., Fuller, A.
PDB entry 7p3e: MHC I A02 Allele presenting YLQLRTFLL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-07-07
Authors: Rizkallah, P.J., Sewell, A.K., Wall, A., Fuller, A.
PDB entry 7p3f: Streptomyces coelicolor dATP/ATP-loaded NrdR in complex with its cognate DNA
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2021-07-07
Authors: Martinez-Carranza, M., Stenmark, P.
PDB entry 7p3g: EED in complex with compound 4
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-07-07
Authors: Read, J.A.
PDB entry 7p3h: Peptide HC02 - Lanthanide Selectivity Engineered into Structurally Characterized Designed Coiled Coils
Classification: METAL BINDING PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-07-07
Authors: White, S.A., Peacock, A.F.A.
PDB entry 7p3i: Crystal structure of human CD40/TNFRSF5 in complex with the anti-CD40 DARPin protein
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2021-07-07
Authors: Malvezzi, F., Mangold, S., Hospodarsch, T., Reichen, C., Iss, C., Lammens, A., Krapp, S., Domke, C.
PDB entry 7p3j: EED in complex with compound 4
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2021-07-07
Authors: Read, J.A.
PDB entry 7p3k: Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12); Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-07-08
Authors: Buschauer, R., Komar, T., Becker, T., Berninghausen, O., Cheng, J., Beckmann, R.
PDB entry 7p3l: Isopenicillin N synthase in complex with Fe and the substrate analogue AadCyshomoCys
Classification: OXIDOREDUCTASE
Source organism: Emericella nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2021-07-08
Authors: Rabe, P., Clifton, I., Schofield, C.J.
PDB entry 7p3m: Solution structures of HIV-1 and SIVmac p6 and their interaction with accessory proteins Vpr and Vpx in the presence of DPC micelles
Classification: VIRAL PROTEIN
Source organism: Simian immunodeficiency virus (isolate K6W)
Experimental method: SOLUTION NMR
Deposited: 2021-07-08
Authors: Wang, X., Nonin-Lecomte, S., Bouaziz, S.
PDB entry 7p3n: F1Fo-ATP synthase from Acinetobacter baumannii (state 2)
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii ATCC 17978
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2021-07-08
Authors: Demmer, J.K., Phillips, B.P., Uhrig, O.L., Filloux, A., Allsopp, L.P., Bublitz, M., Meier, T.
PDB entry 7p3o: Solution structures of HIV-1 and SIVmac p6 and their interaction with accessory proteins Vpr and Vpx in the presence of DPC micelles
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: SOLUTION NMR
Deposited: 2021-07-08
Authors: Wang, X., Nonin-Lecomte, S., Bouaziz, S.
PDB entry 7p3p: Solution structures of HIV-1 and SIVmac p6 and their interaction with accessory proteins Vpr and Vpx in the presence of DPC micelles
Classification: VIRAL PROTEIN
Source organism: Simian immunodeficiency virus
Experimental method: SOLUTION NMR
Deposited: 2021-07-08
Authors: Wang, X., Nonin-Lecomte, S., Bouaziz, S.
PDB entry 7p3q: Streptomyces coelicolor dATP/ATP-loaded NrdR octamer
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces coelicolor A3(2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2021-07-08
Authors: Martinez-Carranza, M., Stenmark, P.
PDB entry 7p3r: Helical structure of the toxin MakA from Vibrio cholera
Classification: TOXIN
Source organism: Vibrio cholerae O1 biovar El Tor str. N16961
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2021-07-08
Authors: Berg, A., Nadeem, A., Uhlin, B.E., Wai, S.N., Barandun, J.
PDB entry 7p3s: Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 12
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.546 Å
Deposited: 2021-07-08
Authors: Shaik, T.B., Romier, C.
PDB entry 7p3t: Transaminase of gamma-proteobacterium
Classification: TRANSFERASE
Source organism: Luminiphilus syltensis NOR5-1B
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-07-08
Authors: Ermler, U.
PDB entry 7p3u: Chitin-active fungal AA11 LPMO
Classification: OXIDOREDUCTASE
Source organism: Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-07-08
Authors: Rohr, A.K., Stoepamo, F.G., Eijsink, V.G.H.
PDB entry 7p3v: B-Raf V600E structure bound to a new inhibitor
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2021-07-08
Authors: Schneider, M., Gelin, M., Cohen-Gonsaud, M., Labesse, G.
PDB entry 7p3w: F1Fo-ATP synthase from Acinetobacter baumannii (state 3)
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-07-08
Authors: Demmer, J.K., Phillips, B.P., Uhrig, O.L., Filloux, A., Allsopp, L.P., Bublitz, M., Meier, T.
PDB entry 7p3x: Homology model of the full-length AP-3 complex in a compact open conformation
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.1 Å
Deposited: 2021-07-09
Authors: Schubert, E., Raunser, S.
PDB entry 7p3y: Homology model of the full-length AP-3 complex in an intermediate open conformation
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 10.1 Å
Deposited: 2021-07-09
Authors: Schubert, E., Raunser, S.
PDB entry 7p3z: Homology model of the full-length AP-3 complex in a stretched open conformation
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 10.5 Å
Deposited: 2021-07-09
Authors: Schubert, E., Raunser, S.
PDB entry 7p40: P5C3 is a potent fab neutralizer
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-07-09
Authors: perez, L.
PDB entry 7p41: Crystal Structure of human mARC1 A165T Variant
Classification: METAL BINDING PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-07-09
Authors: Struwe, M.A., Scheidig, A.J.
PDB entry 7p42: Crystal structure of IpgC in complex with a follow-up compound based on J2
Classification: CHAPERONE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-07-09
Authors: Gardonyi, M., Heine, A., Klebe, G.