LiteFold/PDB huggingface dataset:
PDB entry 3dsl: The Three-dimensional Structure of Bothropasin, the Main Hemorrhagic Factor from Bothrops jararaca venom.
Classification: HYDROLASE
Source organism: Bothrops jararaca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-07-13
Authors: Muniz, J.R.C., Ambrosio, A., Selistre-de-Araujo, H.S., Oliva, G., Garratt, R.C., Souza, D.H.F.
PDB entry 3dsm: Crystal structure of the surface layer protein BACUNI_02894 from Bacteroides uniformis, Northeast Structural Genomics Consortium Target BtR193D.
Classification: structural genomics, unknown function
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-13
Authors: Forouhar, F., Lew, S., Seetharaman, J., Mao, L., Janjua, H., Xiao, R., Foote, E.L., Ciccosanti, C., Maglaqui, M., Everett, J.K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3dsn: Crystal structure of the complex of the Caf1M chaperone with the mini-fiber of two Caf1 subunits (Caf1:Caf1), carrying the Thr7Phe mutation in the Gd donor strand
Classification: CHAPERONE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-13
Authors: Fooks, L.J., Yu, X., Moslehi-Mohebi, E., Tischenko, V., Knight, S.D., MacIntyre, S., Zavialov, A.V.
PDB entry 3dso: Crystal structure of Cu(I) bound copper resistance protein CopK
Classification: METAL BINDING PROTEIN
Source organism: Ralstonia metallidurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-07-13
Authors: Ash, M.-R., Maher, M.J.
PDB entry 3dsp: Crystal structure of apo copper resistance protein CopK
Classification: METAL BINDING PROTEIN
Source organism: Ralstonia metallidurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-13
Authors: Ash, M.-R., Maher, M.J.
PDB entry 3dsq: Structure of Desulfitobacterium hafniense PylSc, a pyrrolysyl tRNA synthetase
Classification: LIGASE
Source organism: Desulfitobacterium hafniense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-14
Authors: Lee, M.M., Chan, M.K.
PDB entry 3dsr: ADP in transition binding site in the subunit B of the energy converter A1Ao ATP synthase
Classification: HYDROLASE
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-07-14
Authors: Kumar, A., Manimekalai, S.M.S., Balakrishna, A.M., Gruber, G.
PDB entry 3dss: Crystal structure of RabGGTase(DELTA LRR; DELTA IG)
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-14
Authors: Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
PDB entry 3dst: Crystal structure of RabGGTase(DELTA LRR; DELTA IG)in complex with geranylgeranyl pyrophosphate
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-14
Authors: Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
PDB entry 3dsu: Crystal structure of RabGGTase(DELTA LRR; DELTA IG)in complex with farnesyl pyrophosphate
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-14
Authors: Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
PDB entry 3dsv: Crystal structure of RabGGTase(DELTA LRR; DELTA IG)in complex with mono-prenylated peptide Ser-Cys-Ser-Cys(GG) derivated from Rab7
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-14
Authors: Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
PDB entry 3dsw: Crystal structure of RabGGTase(DELTA LRR; DELTA IG)in complex with mono-prenylated peptide Ser-Cys(GG)-Ser-Cys derivated from Rab7
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-07-14
Authors: Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
PDB entry 3dsx: Crystal structure of RabGGTase(DELTA LRR; DELTA IG)in complex with di-prenylated peptide Ser-Cys(GG)-Ser-Cys(GG) derivated from Rab7
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-14
Authors: Guo, Z., Yu, S., Goody, R.S., Alexandrov, K., Blankenfeldt, W.
PDB entry 3dsy: E(L212)Q mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-07-14
Authors: Pokkuluri, P.R., Schiffer, M.
PDB entry 3dsz: Engineered human lipocalin 2 in complex with Y-DTPA
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-07-14
Authors: Eichinger, A., Skerra, A.
PDB entry 3dt0: Understanding Thrombin Inhibition
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-07-14
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 3dt1: P38 Complexed with a quinazoline inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-07-14
Authors: Herberich, B., Syed, R., Li, V., Tasker, A.S.
PDB entry 3dt2: The structure of rat cytosolic PEPCK in complex with oxalate and GTP
Classification: LYASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-07-14
Authors: Sullivan, S.M., Holyoak, T.
PDB entry 3dt3: Human Estrogen receptor alpha LBD with GW368
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-07-14
Authors: Williams, S.P., Miller, A.B.
PDB entry 3dt4: The structure of rat cytosolic PEPCK in complex with oxalate and GTP
Classification: LYASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-07-14
Authors: Sullivan, S.M., Holyoak, T.
PDB entry 3dt5: C_terminal domain of protein of unknown function AF_0924 from Archaeoglobus fulgidus.
Classification: structural genomics, unknown function
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2008-07-14
Authors: Osipiuk, J., Evdokimova, E., Kudritska, M., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3dt6: Crystal Structure of Bovin Brain Platelet Activating Factor Acetylhydrolase Covalently Inhibited by Paraoxon
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-14
Authors: Epstein, T.M., Samanta, U., Bahnson, B.J.
PDB entry 3dt7: The structure of rat cytosolic PEPCK in complex with beta-sulfopyruvate and GTP
Classification: LYASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-07-14
Authors: Sullivan, S.M., Holyoak, T.
PDB entry 3dt8: Crystal Structure of Bovin Brain Platelet Activating Factor Acetylhydrolase Covalently Inhibited by Sarin
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-07-14
Authors: Epstein, T.M., Samanta, U., Bahnson, B.J.
PDB entry 3dt9: Crystal Structure of Bovin Brain Platelet Activating Factor Acetylhydrolase Covalently Inhibited by Soman
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-07-14
Authors: Epstein, T.M., Samanta, U., Bahnson, B.J.
PDB entry 3dta: E(L212)Q, N(M44)D double mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-07-14
Authors: Pokkuluri, P.R., Schiffer, M.
PDB entry 3dtb: The structure of rat cytosolic PEPCK in complex with phosphoglycolate and GDP
Classification: LYASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-07-14
Authors: Sullivan, S.M., Holyoak, T.
PDB entry 3dtc: Crystal structure of mixed-lineage kinase MLK1 complexed with compound 16
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-07-14
Authors: Fedorov, A.A., Fedorov, E.V., Meyer, S.L., Hudkins, R.L., Almo, S.C.
PDB entry 3dtd: Crystal structure of invasion associated protein b from bartonella henselae
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bartonella henselae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-07-14
Authors: Patskovsky, Y., Ozyurt, S., Freeman, J., Slocombe, A., Groshong, C., Koss, J., Smith, D., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3dte: Crystal structure of the IRRE protein, a central regulator of DNA damage repair in deinococcaceae
Classification: GENE REGULATION
Source organism: Deinococcus deserti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-07-15
Authors: Vujicic-Zagar, A., Dulermo, R., Le Gorrec, M., Vannier, F., Servant, P., Sommer, S., De Groot, A., Serre, L.
PDB entry 3dtf: Structural analysis of mycobacterial branched chain aminotransferase- implications for inhibitor design
Classification: TRANSFERASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-15
Authors: Castell, A., Unge, T.
PDB entry 3dtg: Structural analysis of mycobacterial branched chain aminotransferase- implications for inhibitor design
Classification: TRANSFERASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-15
Authors: Castell, A., Unge, T.
PDB entry 3dti: Crystal structure of the IRRE protein, a central regulator of DNA damage repair in deinococcaceae
Classification: GENE REGULATION
Source organism: deinococcus deserti
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2008-07-15
Authors: Vujicic-Zagar, A., Dulermo, R., Le Gorrec, M., Vannier, F., Servant, P., Sommer, S., De Groot, A., Serre, L.
PDB entry 3dtj: HIV-1 capsid C-terminal domain mutant (E187A)
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2008-07-15
Authors: Igonet, S., Vaney, M.C., Rey, F.A.
PDB entry 3dtk: Crystal structure of the IRRE protein, a central regulator of DNA damage repair in deinococcaceae
Classification: GENE REGULATION
Source organism: deinococcus deserti
Experimental method: X-RAY DIFFRACTION
Resolution: 3.24 Å
Deposited: 2008-07-15
Authors: Vujicic-Zagar, A., Dulermo, R., Le Gorrec, M., Vannier, F., Servant, P., Sommer, S., de Groot, A., Serre, L.
PDB entry 3dtm: Increased folding stability of TEM-1 beta-lactamase by in-vitro selection
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-07-15
Authors: Kather, I., Jakob, R.P., Dobbek, H., Schmid, F.X.
PDB entry 3dtn: Crystal structure of putative Methyltransferase-MM_2633 from Methanosarcina mazei .
Classification: structural genomics, unknown function
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2008-07-15
Authors: Ramagopal, U.A., Toro, R., Meyer, A.J., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3dto: Crystal structure of the metal-dependent HD domain-containing hydrolase BH2835 from Bacillus halodurans, Northeast Structural Genomics Consortium Target BhR130.
Classification: structural genomics, unknown function
Source organism: Bacillus halodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-07-15
Authors: Forouhar, F., Su, M., Seetharaman, J., Janjua, H., Fang, Y., Xiao, R., Cunningham, K., Ma, L.-C., Owen, L.A., Wang, D., Tong, S., Everett, J.K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3dtp: Tarantula heavy meromyosin obtained by flexible docking to Tarantula muscle thick filament Cryo-EM 3D-MAP
Classification: CONTRACTILE PROTEIN
Source organism: Avicularia avicularia; Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 20 Å
Deposited: 2008-07-15
Authors: Alamo, L., Wriggers, W., Pinto, A., Bartoli, F., Salazar, L., Zhao, F.Q., Craig, R., Padron, R.
PDB entry 3dtq: Engineered human lipocalin 2 with specificity for Y-DTPA, apo-form
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-15
Authors: Eichinger, A., Skerra, A.
PDB entry 3dtr: E(L212)Q, L(L227)F double mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-07-15
Authors: Pokkuluri, P.R., Schiffer, M.
PDB entry 3dts: E(L212)A, D(L213)A, R(M233)L triple mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-07-15
Authors: Pokkuluri, P.R., Schiffer, M.
PDB entry 3dtt: Crystal structure of a putative f420 dependent nadp-reductase (arth_0613) from arthrobacter sp. fb24 at 1.70 A resolution
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter sp. FB24
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-15
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dtu: Catalytic core subunits (I and II) of cytochrome c oxidase from Rhodobacter sphaeroides complexed with deoxycholic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-07-15
Authors: Qin, L., Mills, D.A., Buhrow, L., Hiser, C., Ferguson-Miller, S.
PDB entry 3dtv: Crystal structure of arylmalonate decarboxylase
Classification: LYASE
Source organism: Bordetella bronchiseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-16
Authors: Nakasako, M., Obata, R., Miyamaoto, K., Ohta, H.
PDB entry 3dtw: Crystal structure of the VEGFR2 kinase domain in complex with a benzisoxazole inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-07-16
Authors: Whittington, D.A., Long, A.M., Rose, P., Gu, Y., Zhao, H.
PDB entry 3dtx: Crystal structure of HLA-B*2705 complexed with the double citrullinated vasoactive intestinal peptide type 1 receptor (VIPR) peptide (residues 400-408)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-16
Authors: Beltrami, A., Gabdulkhakov, A., Rossmann, M., Ziegler, A., Uchanska-Ziegler, B., Saenger, W.
PDB entry 3dty: Crystal structure of an Oxidoreductase from Pseudomonas syringae
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas syringae pv. tomato
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2008-07-16
Authors: Eswaramoorthy, S., Mahmood, A., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3dtz: Crystal structure of Putative Chlorite dismutase TA0507
Classification: structural genomics, unknown function
Source organism: Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2008-07-16
Authors: Chang, C., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3du0: E. coli dihydrodipicolinate synthase with first substrate, pyruvate, bound in active site
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-07-16
Authors: Dobson, R.C.J., Devenish, S.R.A., Gerrard, J.A., Jameson, G.B.
PDB entry 3du1: The 2.0 Angstrom Resolution Crystal Structure of HetL, a Pentapeptide Repeat Protein involved in Heterocyst Differentiation Regulation from the Cyanobacterium Nostoc sp. Strain PCC 7120
Classification: STRUCTURAL PROTEIN
Source organism: Nostoc sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-07-16
Authors: Kennedy, M.A., Ni, S., Sheldrick, G.M.
PDB entry 3du2: E(L212)A mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-07-16
Authors: Pokkuluri, P.R., Schiffer, M.
PDB entry 3du3: E(L212)A, D(L213)A, A(M249)Y triple mutant structure of photosynthetic reaction center
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-07-16
Authors: Pokkuluri, P.R., Schiffer, M.
PDB entry 3du4: Crystal structure of 7-keto-8-aminopelargonic acid bound 7,8-diaminopelargonic acid synthase in bacillus subtilis
Classification: TRANSFERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-16
Authors: Dey, S., Sacchettini, J.C.
PDB entry 3du5: Structure of the catalytic subunit of telomerase, TERT
Classification: TRANSFERASE
Source organism: Tribolium castaneum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2008-07-16
Authors: Skordalakes, E.
PDB entry 3du6: Structure of the catalytic subunit of telomerase, TERT
Classification: TRANSFERASE
Source organism: Tribolium castaneum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2008-07-16
Authors: Skordalakes, E.
PDB entry 3du7: Tubulin-colchicine-phomopsin A: Stathmin-like domain complex
Classification: CELL CYCLE
Source organism: Bos taurus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.1 Å
Deposited: 2008-07-17
Authors: Cormier, A., Marchand, M., Ravelli, R.B., Knossow, M., Gigant, B.
PDB entry 3du8: Crystal structure of GSK-3 beta in complex with NMS-869553A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-17
Authors: Bossi, R.T.
PDB entry 3due: CRYSTAL STRUCTURE OF A PUTATIVE PERIPLASMIC PROTEIN FROM DUF2874 FAMILY (BVU_2987) FROM BACTEROIDES VULGATUS ATCC 8482 AT 1.85 A RESOLUTION
Classification: UNKNOWN FUNCTION
Source organism: Bacteroides vulgatus ATCC 8482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-07-17
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3duf: Snapshots of catalysis in the E1 subunit of the pyruvate dehydrogenase multi-enzyme complex
Classification: OXIDOREDUCTASE/TRANSFERASE
Source organism: Bacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-17
Authors: Pei, X.Y., Titman, C.M., Frank, R.A.W., Leeper, F.J., Luisi, B.F.
PDB entry 3dug: Crystal structure of zn-dependent arginine carboxypeptidase complexed with zinc
Classification: HYDROLASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2008-07-17
Authors: Patskovsky, Y., Ramagopal, U.A., Toro, R., Meyer, A.J., Freeman, J., Iizuka, M., Bain, K., Rodgers, L., Raushel, F., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3duh: Structure of Interleukin-23
Classification: IMMUNE SYSTEM/CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-17
Authors: Lupardus, P.J., Garcia, K.C.
PDB entry 3dui: Crystal structure of the oxidized CG-1B: an adhesion/growth-regulatory lectin from chicken
Classification: SUGAR BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-17
Authors: Romero, A., Lopez-Lucendo, M.I.F., Solis, D., Gabius, H.-J.
PDB entry 3duk: CRYSTAL STRUCTURE OF A NTF2-LIKE PROTEIN OF UNKNOWN FUNCTION (MFLA_0564) FROM METHYLOBACILLUS FLAGELLATUS KT AT 2.200 A RESOLUTION
Classification: UNKNOWN FUNCTION
Source organism: Methylobacillus flagellatus KT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-17
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dul: Crystal Structure Analysis of the O-methyltransferase from Bacillus cereus
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-17
Authors: Cho, J.-H., Rhee, S.
PDB entry 3dup: Crystal structure of mutt/nudix family hydrolase from rhodospirillum rubrum atcc 11170
Classification: HYDROLASE
Source organism: Rhodospirillum rubrum ATCC 11170
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-17
Authors: Patskovsky, Y., Ramagopal, U.A., Toro, R., Freeman, J., Chang, S., Groshong, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3duq: E(L212)A, D(L213)A, N(M5)D triple mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Classification: PHOTOSYNTHESIS
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-07-17
Authors: Pokkuluri, P.R., Schiffer, M.
PDB entry 3dur: Crystal structure of SAG173-04
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2008-07-17
Authors: Brooks, C.L., Blackler, R.J., Gerstenbruch, S., Kosma, P., Muller-Loennies, S., Brade, H., Evans, S.V.
PDB entry 3dus: Crystal structure of SAG506-01, orthorhombic, twinned, crystal 1
Classification: IMMUNE SYSTEM
Source organism: Mus Musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-07-17
Authors: Brooks, C.L., Blackler, R.J., Gerstenbruch, S., Kosma, P., Muller-Loennies, S., Brade, H., Evans, S.V.
PDB entry 3dut: The high salt (phosphate) crystal structure of deoxy hemoglobin E (GLU26LYS) at physiological pH (pH 7.35)
Classification: OXYGEN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-07-17
Authors: Malashkevich, V.N., Balazs, T.C., Almo, S.C., Hirsch, R.E.
PDB entry 3duu: Crystal structure of SAG506-01, orthorhombic, twinned, crystal 2
Classification: IMMUNE SYSTEM
Source organism: Mus Musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-07-17
Authors: Brooks, C.L., Blackler, R.J., Gerstenbruch, S., Kosma, P., Muller-Loennies, S., Brade, H., Evans, S.V.
PDB entry 3duv: Crystal structure of 3-deoxy-manno-octulosonate cytidylyltransferase from Haemophilus influenzae complexed with the substrate 3-deoxy-manno-octulosonate in the-configuration
Classification: TRANSFERASE
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-18
Authors: Yoon, H.J., Ku, M.J., Mikami, B., Suh, S.W.
PDB entry 3duw: Crystal Structural Analysis of the O-methyltransferase from Bacillus cereus in complex SAH
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-07-18
Authors: Cho, J.-H., Rhee, S.
PDB entry 3dux: Understanding Thrombin Inhibition
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-07-18
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 3duy: Crystal structure of human beta-secretase in complex with NVP-AFJ144
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2008-07-18
Authors: Rondeau, J.-M.
PDB entry 3duz: Crystal structure of the postfusion form of baculovirus fusion protein GP64
Classification: VIRAL PROTEIN
Source organism: Autographa californica nuclear polyhedrosis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-07-18
Authors: Kadlec, J., Loureiro, S., Abrescia, N.G.A., Jones, I.M., Stuart, D.I.
PDB entry 3dv0: Snapshots of catalysis in the E1 subunit of the pyruvate dehydrogenase multi-enzyme complex
Classification: OXIDOREDUCTASE/TRANSFERASE
Source organism: Bacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-18
Authors: Pei, X.Y., Titman, C.M., Frank, R.A.W., Leeper, F.J., Luisi, B.F.
PDB entry 3dv1: Crystal structure of human beta-secretase in complex with NVP-ARV999
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-18
Authors: Rondeau, J.-M.
PDB entry 3dv2: Crystal Structure of nicotinic acid mononucleotide adenylyltransferase from Bacillus anthracis
Classification: TRANSFERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-18
Authors: Lu, S., Smith, C.D., Yang, Z., Pruett, P.S., Nagy, L., McCombs, D.P., DeLucas, L.J., Brouillette, W.J., Brouillette, C.G.
PDB entry 3dv3: MEK1 with PF-04622664 Bound
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-18
Authors: Kazmirski, S.L., Kothe, M., Ding, Y.-H.
PDB entry 3dv4: Crystal structure of SAG506-01, tetragonal, crystal 1
Classification: IMMUNE SYSTEM
Source organism: Mus Musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-07-18
Authors: Brooks, C.L., Blackler, R.J., Gerstenbruch, S., Kosma, P., Muller-Loennies, S., Brade, H., Evans, S.V.
PDB entry 3dv5: Crystal structure of human beta-secretase in complex with NVP-BAV544
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-18
Authors: Rondeau, J.-M.
PDB entry 3dv6: Crystal structure of SAG506-01, tetragonal, crystal 2
Classification: IMMUNE SYSTEM
Source organism: Mus Musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-07-18
Authors: Brooks, C.L., Blackler, R.J., Gerstenbruch, S., Kosma, P., Muller-Loennies, S., Brade, H., Evans, S.V.
PDB entry 3dv7: Role of Hydrophilic Residues in Proton Transfer During Catalysis by Human Carbonic Anhydrase II (N62A)
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-18
Authors: Avvaru, B.S.
PDB entry 3dv8: Crystal structure of a putative transcriptional regulator of the crp/fnr family (eubrec_1222) from eubacterium rectale atcc 33656 at 2.55 A resolution
Classification: TRANSCRIPTION
Source organism: Eubacterium rectale ATCC 33656
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-07-18
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3dv9: Putative beta-phosphoglucomutase from Bacteroides vulgatus.
Classification: ISOMERASE
Source organism: Bacteroides vulgatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2008-07-18
Authors: Osipiuk, J., Tesar, C., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3dva: Snapshots of catalysis in the E1 subunit of the pyruvate dehydrogenase multi-enzyme complex
Classification: OXIDOREDUCTASE/TRANSFERASE
Source organism: Bacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-07-18
Authors: Pei, X.Y., Titman, C.M., Frank, R.A.W., Leeper, F.J., Luisi, B.F.
PDB entry 3dvb: X-ray crystal structure of mutant N62V human Carbonic Anhydrase II
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-18
Authors: Avvaru, B.S.
PDB entry 3dvc: X-ray crystal structure of mutant N62T of human Carbonic Anhydrase II
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-07-18
Authors: Avvaru, B.S.
PDB entry 3dvd: X-ray crystal structure of mutant N62D of human Carbonic Anhydrase II
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-07-18
Authors: Avvaru, B.S.
PDB entry 3dve: Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-07-18
Authors: Kim, E.Y., Rumpf, C.H., Fujiwara, Y., Cooley, E.S., Van Petegem, F., Minor, D.L.
PDB entry 3dvf: Structure of amyloidogenic kappa 1 Bence Jones protein
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-18
Authors: Randles, E.G., Thompson, J.R., Ramirez-Alvarado, M.
PDB entry 3dvg: Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-07-18
Authors: Hymowitz, S.G.
PDB entry 3dvh: LC8 Point mutant K36P
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-07-18
Authors: Lightcap, C.M., Williams, J.C.
PDB entry 3dvi: Crystal structure of kappa 1 amyloidogenic light chain variable domain
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2008-07-18
Authors: Thompson, J.R., Randles, E.G., Ramirez-Alvarado, M.
PDB entry 3dvj: Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain (without cloning artifact, HM to TV) complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-07-18
Authors: Kim, E.Y., Rumpf, C.H., Fujiwara, Y., Cooley, E.S., Van Petegem, F., Minor, D.L.
PDB entry 3dvk: Crystal Structure of Ca2+/CaM-CaV2.3 IQ domain complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-18
Authors: Kim, E.Y., Rumpf, C.H., Fujiwara, Y., Cooley, E.S., Van Petegem, F., Minor, D.L.
PDB entry 3dvl: Crystal Structure of Full Length Circadian Clock Protein KaiC with Correct Geometry at Phosphorylation Sites
Classification: CIRCADIAN CLOCK PROTEIN, Transferase
Source organism: Synechococcus elongatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-07-18
Authors: Pattanayek, R., Egli, M.
PDB entry 3dvm: Crystal Structure of Ca2+/CaM-CaV2.1 IQ domain complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-07-18
Authors: Kim, E.Y., Rumpf, C.H., Fujiwara, Y., Cooley, E.S., Van Petegem, F., Minor, D.L.
PDB entry 3dvn: Crystal structure of K63-specific fab Apu2.16 bound to K63-linked di-ubiquitin
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-07-18
Authors: Hymowitz, S.G.
PDB entry 3dvo: SgrAI with cognate DNA and calcium bound
Classification: HYDROLASE/DNA
Source organism: Streptomyces griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2008-07-18
Authors: Dunten, P.W., Horton, N.C., Little, E.J.
PDB entry 3dvp: Pak1 peptide bound LC8
Classification: STRUCTURAL PROTEIN, MOTOR PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-18
Authors: Lightcap, C.M., Williams, J.C.
PDB entry 3dvq: Proteinase K by LB nanotemplate method before high X-Ray dose on ESRF ID14-2 beamline
Classification: HYDROLASE
Source organism: Tritirachium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2008-07-20
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3dvr: Proteinase K by LB nanotemplate method after the first step of high X-Ray dose on ESRF ID14-2 beamline
Classification: HYDROLASE
Source organism: Tritirachium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2008-07-20
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3dvs: Proteinase K by LB nanotmplate method after the second step of high dose on ESRF ID14-2 beamline
Classification: HYDROLASE
Source organism: Tritirachium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2008-07-20
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3dvt: Biochemical and structural characterization of the PAK1- LC8 interaction
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-07-20
Authors: LIghtcap, C.M., Williams, J.C.
PDB entry 3dvu: Crystal structure of the complex of murine gamma-herpesvirus 68 Bcl-2 homolog M11 and the Beclin 1 BH3 domain
Classification: Viral Protein/apoptosis
Source organism: Murid herpesvirus 4; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-20
Authors: Sinha, S.
PDB entry 3dvv: Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin (U267OMe)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-07-21
Authors: Ennifar, E., Dumas, P., Olieric, V.
PDB entry 3dvw: Crystal structure of reduced DsbA1 from Neisseria meningitidis
Classification: OXIDOREDUCTASE
Source organism: Neisseria meningitidis MC58
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-07-21
Authors: Lafaye, C., Serre, L.
PDB entry 3dvx: Crystal structure of reduced DsbA3 from Neisseria meningitidis
Classification: OXIDOREDUCTASE
Source organism: Neisseria meningitidis MC58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-07-21
Authors: Lafaye, C., Serre, L.
PDB entry 3dvz: Crystal Structure of the Sarcin/Ricin Domain from E. coli 23 S rRNA
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2008-07-21
Authors: Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
PDB entry 3dw0: Crystal structure of the class A carbapenemase KPC-2 at 1.6 angstrom resolution
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-07-21
Authors: Petrella, S., Ziental-Gelus, N., Mayer, C., Jarlier, V., Sougakoff, W.
PDB entry 3dw1: Proteinase K by LB nanotemplate method after the third step high X-Ray dose on ESRF ID14-2 beamline
Classification: HYDROLASE
Source organism: Tritirachium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2008-07-21
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3dw3: Proteinase K by Classical hanging drop method before high X Ray dose on ESRF ID 14-2 beamline
Classification: HYDROLASE
Source organism: Tritirachium album
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2008-07-21
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3dw4: Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2650-OCH3 modified
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2008-07-21
Authors: Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
PDB entry 3dw5: Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23S rRNA, U2656-OCH3 modified
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2008-07-21
Authors: Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
PDB entry 3dw6: Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2650-SECH3 modified
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2008-07-21
Authors: Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
PDB entry 3dw7: Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2656-SeCH3 modified
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2008-07-21
Authors: Olieric, V., Rieder, U., Lang, K., Serganov, A., Schulze-Briese, C., Micura, R., Dumas, P., Ennifar, E.
PDB entry 3dw8: Structure of a Protein Phosphatase 2A Holoenzyme with B55 subunit
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2008-07-21
Authors: Xu, Y., Chen, Y., Zhang, P., Jeffrey, P.D., Shi, Y.
PDB entry 3dw9: SgrAI with cognate DNA and manganese bound
Classification: HYDROLASE/DNA
Source organism: Streptomyces griseus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-21
Authors: Dunten, P.W., Horton, N.C., Little, E.J.
PDB entry 3dwa: Crystal structure of the B-subunit of the AB5 toxin from E. coli
Classification: TOXIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.084 Å
Deposited: 2008-07-22
Authors: Byres, E., Paton, A.W., Paton, J.C., Lofling, J.C., Smith, D.F., Wilce, M.C.J., Talbot, U.M., Chong, D.C., Yu, H., Huang, S., Chen, X., Varki, N.M., Varki, A., Rossjohn, J., Beddoe, T.
PDB entry 3dwb: structure of human ECE-1 complexed with phosphoramidon
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2008-07-22
Authors: Oefner, C.
PDB entry 3dwc: Trypanosoma Cruzi Metallocarboxypeptidase 1
Classification: HYDROLASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-22
Authors: Niemirowicz, G., Fernandez, D., Sola, M., Cazzulo, J.J., Aviles, F.X., Gomis-Ruth, F.X.
PDB entry 3dwd: Crystal structure of the ArfGAP domain of human ARFGAP1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-07-22
Authors: Nedyalkova, L., Tong, Y., Tempel, W., Landry, R., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Wilkstrom, M., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3dwe: Proteinase K by Classical hanging drop method after high X-Ray dose on ESRF ID14-2 beamline
Classification: HYDROLASE
Source organism: Tritirachium album
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2008-07-22
Authors: Pechkova, E., Tripathi, S.K., Nicolini, C.
PDB entry 3dwf: Crystal Structure of the Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278E
Classification: OXIDOREDUCTASE
Source organism: Cavia porcellus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-22
Authors: Lawson, A.J., Ride, J.P., White, S.A., Walker, E.A.
PDB entry 3dwg: Crystal structure of a sulfur carrier protein complex found in the cysteine biosynthetic pathway of Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2008-07-22
Authors: Jurgenson, C.T., Burns, K.E., Begley, T.P., Ealick, S.E.
PDB entry 3dwh: Structural and Functional Analysis of SRA domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-07-22
Authors: Qian, C., Jakoncic, J., Zhou, M.
PDB entry 3dwi: Crystal structure of Mycobacterium tuberculosis CysM, the cysteine synthase B
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2008-07-22
Authors: Jurgenson, C.T., Burns, K.E., Begley, T.P., Ealick, S.E.
PDB entry 3dwj: Heme-proximal W188H mutant of inducible nitric oxide synthase
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2008-07-22
Authors: Tejero, J., Biswas, A., Wang, Z.-Q., Haque, M.M., Hemann, C., Zweier, J.L., Page, R.C., Misra, S., Stuehr, D.J.
PDB entry 3dwk: Identification of Dynamic Structural Motifs Involved in Peptidoglycan Glycosyltransfer
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-07-22
Authors: Lovering, A.L., De Castro, L., Strynadka, N.C.J.
PDB entry 3dwl: Crystal Structure of Fission Yeast Arp2/3 Complex Lacking the Arp2 Subunit
Classification: STRUCTURAL PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 3.78 Å
Deposited: 2008-07-22
Authors: Nolen, B.J., Pollard, T.D.
PDB entry 3dwm: Crystal structure of Mycobacterium tuberculosis CysO, an antigen
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2008-07-22
Authors: Jurgenson, C.T., Burns, K.E., Begley, T.P., Ealick, S.E.
PDB entry 3dwn: Crystal structure of the long-chain fatty acid transporter FadL mutant A77E/S100R
Classification: LIPID TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-22
Authors: Hearn, E.M., Patel, D.R., Lepore, B.W., Indic, M., van den Berg, B.
PDB entry 3dwo: Crystal structure of a Pseudomonas aeruginosa FadL homologue
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-22
Authors: Hearn, E.M., Patel, D.R., Lepore, B.W., Indic, M., van den Berg, B.
PDB entry 3dwp: Crystal structure of the B-subunit of the AB5 toxin from E. Coli with Neu5Gc
Classification: TOXIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-07-22
Authors: Byres, E., Paton, A.W., Paton, J.C., Lofling, J.C., Smith, D.F., Wilce, M.C.J., Talbot, U.M., Chong, D.C., Yu, H., Huang, S., Chen, X., Varki, N.M., Varki, A., Rossjohn, J., Beddoe, T.
PDB entry 3dwq: Crystal structure of the A-subunit of the AB5 toxin from E. coli with Neu5Gc-2,3Gal-1,3GlcNAc
Classification: TOXIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-22
Authors: Byres, E., Paton, A.W., Paton, J.C., Lofling, J.C., Smith, D.F., Wilce, M.C.J., Talbot, U.M., Chong, D.C., Yu, H., Huang, S., Chen, X., Varki, N.M., Varki, A., Rossjohn, J., Beddoe, T.
PDB entry 3dwr: Leishmania major coproporphyrinogen III oxidase with bound ligand
Classification: OXIDOREDUCTASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2008-07-22
Authors: Le Trong, I., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
PDB entry 3dws: Leishmania major Coproporphyrinogen III Oxidase with bound ligand
Classification: OXIDOREDUCTASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-22
Authors: Le Trong, I., Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
PDB entry 3dwt: Structure of CabBCII-10 nanobody
Classification: IMMUNE SYSTEM
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-07-23
Authors: Vincke, C., Loris, R., Muyldermans, S., Conrath, K.
PDB entry 3dwu: Transition-state model conformation of the switch I region fitted into the cryo-EM map of the eEF2.80S.AlF4.GDP complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Thermus thermophilus HB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 12.6 Å
Deposited: 2008-07-23
Authors: Nissen, P., Nyborg, J., Kjeldgaard, M.
PDB entry 3dwv: Glutathione peroxidase-type tryparedoxin peroxidase, oxidized form
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2008-07-23
Authors: Tews, I., Sinning, I., Krauth-Siegel, L.
PDB entry 3dww: Electron crystallographic structure of human microsomal prostaglandin E synthase 1
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 3.5 Å
Deposited: 2008-07-23
Authors: Hebert, H., Jegerschold, C.
PDB entry 3dwy: Crystal Structure of the Bromodomain of Human CREBBP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2008-07-23
Authors: Filippakopoulos, P., Picaud, S., Fedorov, O., Karim, R., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Wickstroem, M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3dwz: Meropenem Covalent Adduct with TB Beta-lactamase
Classification: HYDROLASE/ANTIBIOTIC
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-23
Authors: Tremblay, L.W., Hugonnet, J.E., Blanchard, J.S.
PDB entry 3dx0: Golgi alpha-Mannosidase II in complex with Mannostatin A at pH 5.75
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-23
Authors: Kuntz, D.A., Rose, D.R.
PDB entry 3dx1: Golgi alpha-Mannosidase II in complex with Mannostatin analog (1S,2S,3R,4R)-4-aminocyclopentane-1,2,3-triol
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-07-23
Authors: Kuntz, D.A., Rose, D.R.
PDB entry 3dx2: Golgi mannosidase II complex with MANNOSTATIN B
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-07-23
Authors: Kuntz, D.A., Zhong, W., Guo, J., Rose, D.R., Boons, G.-J.
PDB entry 3dx3: Golgi alpha-Mannosidase II in complex with Mannostatin analog (1R,2R,3S,4R,5R)-5-aminocyclopentane-1,2,3,4-tetraol
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2008-07-23
Authors: Kuntz, D.A., Rose, D.R.
PDB entry 3dx4: Golgi alpha-Mannosidase II in complex with Mannostatin analog (1R,2R,3R,4S,5R)-4-amino-5-methoxycyclopentane-1,2,3-triol
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2008-07-23
Authors: Kuntz, D.A., Rose, D.R.
PDB entry 3dx5: Crystal structure of the probable 3-DHS dehydratase AsbF involved in the petrobactin synthesis from Bacillus anthracis
Classification: LYASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2008-07-23
Authors: Kim, Y., Maltseva, N., Stols, L., Eschenfeldt, W., Pfleger, B.F., Sherman, D.H., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3dx6: Crystal Structure of B*4402 presenting a 10mer EBV epitope
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2008-07-23
Authors: Archbold, J.K., Ely, L.K., Rossjohn, J.
PDB entry 3dx7: Crystal Structure of HLA-B*4403 presenting 10mer EBV antigen
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-07-23
Authors: Archbold, J.K., Ely, L.K., Rossjohn, J.
PDB entry 3dx8: Crystal Structure of B*4405 presenting a 10mer EBV epitope
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-23
Authors: Archbold, J.K., Ely, L.K., Rossjohn, J.
PDB entry 3dx9: Crystal Structure of the DM1 TCR at 2.75A
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2008-07-24
Authors: Archbold, J.K., Macdonald, W.A., Gras, S., Rossjohn, J.