LiteFold/PDB huggingface dataset:
PDB entry 5jr8: Disposal of Iron by a Mutant form of Siderocalin NGAL
Classification: Siderophore binding protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2016-05-05
Authors: Rupert, P.B., Strong, R.K., Barasch, J., Hollman, M., Deng, R., Hod, E.A., Abergel, R., Allred, B., Xu, K., Darrah, S., Tekabe, Y., Perlstein, A., Bruck, E., Stauber, J., Corbin, K., Buchen, C., Slavkovich, V., Graziano, J., Spitalnik, S., Qiu, A.
PDB entry 5jr9: Crystal structure of apo-NeC3PO
Classification: DNA BINDING PROTEIN
Source organism: Nanoarchaeum equitans (strain Kin4-M)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-05-06
Authors: Zhang, J., Gan, J.
PDB entry 5jra: Nitric oxide complex of the L16V mutant of cytochrome c prime from Alcaligenes xylosoxidans
Classification: ELECTRON TRANSPORT
Source organism: Alcaligenes xylosoxydans xylosoxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2016-05-06
Authors: Kekilli, D., Strange, R.W., Hough, M.A.
PDB entry 5jrb: Rad52(1-212) K102A/K133A/E202A mutant
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.405 Å
Deposited: 2016-05-06
Authors: Saotome, M., Saito, K., Kurumizaka, H., Kagawa, W.
PDB entry 5jrc: Crystal structure of NeC3PO in complex with ssRNA.
Classification: DNA BINDING PROTEIN
Source organism: Nanoarchaeum equitans (strain Kin4-M); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-05-06
Authors: Zhang, J., Gan, J.
PDB entry 5jrd: E. coli Hydrogenase-1 variant P508A
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli; Escherichia coli (strain K12); Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2016-05-06
Authors: Carr, S.B., Phillips, S.E.V., Armstrong, F.A., Evans, R.M., Brooke, E.J., Islam, S.T.A.
PDB entry 5jre: Crystal structure of NeC3PO in complex with ssDNA.
Classification: DNA BINDING PROTEIN
Source organism: Nanoarchaeum equitans (strain Kin4-M); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-05-06
Authors: Gan, J., Zhang, J.
PDB entry 5jrf: Crystal structure of the light-driven sodium pump KR2 bound with iodide ions
Classification: TRANSPORT PROTEIN
Source organism: Dokdonia eikasta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-05-06
Authors: Melnikov, I., Polovinkin, V., Kovalev, K., Shevchenko, V., Gushchin, I., Popov, A., Gordeliy, V.
PDB entry 5jrg: Crystal structure of the nucleosome containing the DNA with tetrahydrofuran (THF)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-05-06
Authors: Osakabe, A., Arimura, Y., Horikoshi, N., Kurumizaka, H.
PDB entry 5jrh: Crystal structure of Salmonella enterica acetyl-CoA synthetase (Acs) in complex with cAMP and Coenzyme A
Classification: LIGASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.644 Å
Deposited: 2016-05-06
Authors: Shen, L., Zhang, Y.
PDB entry 5jri: Structure of an oxidoreductase SeMet-labelled from Synechocystis sp. PCC6803
Classification: OXIDOREDUCTASE
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 1.952 Å
Deposited: 2016-05-06
Authors: Buey, R.M., de Pereda, J.M., Balsera, M.
PDB entry 5jrj: Crystal Structure of Herbaspirillum seropedicae RecA
Classification: DNA BINDING PROTEIN
Source organism: Herbaspirillum seropedicae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-05-06
Authors: Leite, W.C., Galvao, C.W., Saab, S.C., Iulek, J., Etto, R.M., Steffens, M.B.R., Chitteni-Pattu, S., Stanage, T., Keck, J.L., Cox, M.M.
PDB entry 5jrk: Crystal Structure of the Sphingopyxin I Lasso Peptide Isopeptidase SpI-IsoP (SeMet-derived)
Classification: HYDROLASE
Source organism: Sphingopyxis alaskensis RB2256
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-05-06
Authors: Fage, C.D., Hegemann, J.D., Bange, G., Marahiel, M.A.
PDB entry 5jrl: Crystal Structure of the Sphingopyxin I Lasso Peptide Isopeptidase SpI-IsoP (Native)
Classification: HYDROLASE
Source organism: Sphingopyxis alaskensis RB2256
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2016-05-06
Authors: Fage, C.D., Hegemann, J.D., Bange, G., Marahiel, M.A.
PDB entry 5jrm: Crystal Structure of a Xylanase at 1.56 Angstroem resolution
Classification: HYDROLASE
Source organism: Fusarium oxysporum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2016-05-06
Authors: Gomez, S., Payne, A.M., Savko, M., Fox, G.C., Shepard, W.E., Fernandez, F.J., Vega, M.C.
PDB entry 5jrn: Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution
Classification: HYDROLASE
Source organism: Fusarium oxysporum f. sp. vasinfectum 25433
Experimental method: X-RAY DIFFRACTION
Resolution: 2.841 Å
Deposited: 2016-05-06
Authors: Gomez, S., Payne, A.M., Savko, M., Fox, G.C., Shepard, W.E., Fernandez, F.J., Vega, M.C.
PDB entry 5jro: The crystal structure of azoreductase from Yersinia pestis CO92 in its Apo form
Classification: OXIDOREDUCTASE
Source organism: Yersinia pestis CO92
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2016-05-06
Authors: Tan, K., Gu, M., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5jrp: crystal structure of monoclonal antibody MR78 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-05-06
Authors: Dong, J., Crowe, J.
PDB entry 5jrq: BRAFV600E Kinase Domain In Complex with Chemically Linked Vemurafenib Inhibitor VEM-6-VEM
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.287 Å
Deposited: 2016-05-06
Authors: Grasso, M.J., Marmorstein, R.
PDB entry 5jrr: Crystal structure of native laccase from Thermus thermophilus HB27
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-05-06
Authors: Diaz-Vilchis, A., Ruiz-Arellano, R.R., Rosas-Benitez, E., Rudino-Pinera, E.
PDB entry 5jrs: CRYSTAL STRUCTURE OF BRUTON AGAMMAGLOBULINEMIA TYROSINE KINASE COMPLEXED WITH 4-[2-FLUORO-3-(4-OXO -3,4-DIHYDROQUINAZOLIN-3-YL)PHENYL]-7-(2-HYDROXYPROPAN-2-Y L)-9H-CARBAZOLE-1-CARBOXAMIDE
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2016-05-06
Authors: Muckelbauer, J.K.
PDB entry 5jrt: Crystal structure of the human Tankyrase 2 (TNKS2) SAM domain (DH902/924RE)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2016-05-06
Authors: Guettler, S., Mariotti, L., Cronin, N.
PDB entry 5jru: Crystal structure of Fe(II) unliganded H-NOX protein from C. subterraneus
Classification: SIGNALING PROTEIN
Source organism: Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.305 Å
Deposited: 2016-05-06
Authors: Bruegger, J., Hespen, C., Phillips-Piro, C.M., Marletta, M.A.
PDB entry 5jrv: Crystal structure of Fe(II) NO-bound H-NOX protein from C. subterraneus
Classification: SIGNALING PROTEIN
Source organism: Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.953 Å
Deposited: 2016-05-06
Authors: Bruegger, J., Hespen, C., Phillips-Piro, C.M., Marletta, M.A.
PDB entry 5jrw: Crystal structure of Thermotoga maritima mutant D89R/D253R
Classification: TRANSPORT PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2016-05-06
Authors: Kowatz, T., Maguire, M.
PDB entry 5jrx: Crystal structure of Fe(II) CO-bound H-NOX protein from C. subterraneus
Classification: SIGNALING PROTEIN
Source organism: Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-05-06
Authors: Bruegger, J., Hespen, C., Phillips-Piro, C.M., Marletta, M.A.
PDB entry 5jry: Crystal structure of a NAD-dependent Aldehyde dehydrogenase from Burkholderia multivorans in covalent complex with NAD
Classification: OXIDOREDUCTASE
Source organism: Burkholderia multivorans (strain ATCC 17616 / 249)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2016-05-06
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5jrz: Structure of the NS3 helicase from the French Polynesia strain of the Zika virus
Classification: HYDROLASE
Source organism: Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2016-05-06
Authors: Jain, R., Coloma, J., Aggarwal, A.K.
PDB entry 5js1: Human Argonaute2 Bound to an siRNA
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.499 Å
Deposited: 2016-05-07
Authors: Schirle, N.T., MacRae, I.J.
PDB entry 5js2: Human Argonaute-2 Bound to a Modified siRNA
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.954 Å
Deposited: 2016-05-07
Authors: Schirle, N.T., MacRae, I.J.
PDB entry 5js3: Thermolysin in complex with JC114.
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2016-05-07
Authors: Krimmer, S.G., Cramer, J., Heine, A., Klebe, G.
PDB entry 5js4: Crystal structure of phiAB6 tailspike
Classification: VIRAL PROTEIN
Source organism: unidentified phage
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2016-05-07
Authors: Lee, I.M., Tu, I.F., Huang, K.F., Wu, S.H.
PDB entry 5js5: Nitric oxide complex of the L16F mutant of cytochrome c prime from Alcaligenes xylosoxidans
Classification: ELECTRON TRANSPORT
Source organism: Alcaligenes xylosoxydans xylosoxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-05-07
Authors: Kekilli, D., Strange, R.W., Hough, M.A.
PDB entry 5js6: Crystal structure of 17beta-hydroxysteroid dehydrogenase 14 T205 variant in complex with NAD.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2016-05-07
Authors: Bertoletti, N., Marchais-Oberwinkler, S., Heine, A., Klebe, G.
PDB entry 5js7: Structural model of a apo G-protein alpha subunit determined with NMR residual dipolar couplings and SAXS
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2016-05-07
Authors: Goricanec, D., Stehle, R., Grigoriu, S., Wagner, G., Hagn, F.
PDB entry 5js8: Structural Model of a Protein alpha subunit in complex with GDP obtained with SAXS and NMR residual couplings
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2016-05-07
Authors: Goricanec, D., Stehle, R., Grigoriu, S., Wagner, G., Hagn, F.
PDB entry 5js9: Uncleaved prefusion optimized gp140 trimer with an engineered 8-residue HR1 turn bound to broadly neutralizing antibodies 8ANC195 and PGT128
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 6.918 Å
Deposited: 2016-05-07
Authors: Kong, L., Wilson, I.A.
PDB entry 5jsa: Uncleaved prefusion optimized gp140 trimer with an engineered 10-residue HR1 turn bound to broadly neutralizing antibodies 8ANC195 and PGT128
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 6.308 Å
Deposited: 2016-05-07
Authors: Kong, L., Wilson, I.A.
PDB entry 5jsb: Crystal structure of Mcl1-inhibitor complex
Classification: Viral Protein/Inhibitor
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2016-05-07
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 5jsc: Crystal structure of a Putative acyl-CoA dehydrogenase from Burkholderia xenovorans
Classification: OXIDOREDUCTASE
Source organism: Burkholderia xenovorans (strain LB400)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-05-07
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5jsd: Crystal structure of phiAB6 tailspike in complex with five-repeated oligosaccharides of Acinetobacter baumannii surface polysaccharide
Classification: VIRAL PROTEIN
Source organism: unidentified phage
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2016-05-08
Authors: Lee, I.M., Tu, I.F., Huang, K.F., Wu, S.H.
PDB entry 5jse: Crystal structure of phiAB6 tailspike in complex with three-repeated oligosaccharides of Acinetobacter baumannii surface polysaccharide
Classification: VIRAL PROTEIN
Source organism: unidentified phage
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2016-05-08
Authors: Lee, I.M., Tu, I.F., Huang, K.F., Wu, S.H.
PDB entry 5jsf: Crystal structure of 17beta-hydroxysteroid dehydrogenase 14 S205 variant in complex with NAD.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.842 Å
Deposited: 2016-05-08
Authors: Bertoletti, N., Marchais-Oberwinkler, S., Heine, A., Klebe, G.
PDB entry 5jsg: Crystal structure of Spindlin1 bound to compound EML405
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-05-08
Authors: Su, X., Li, H.
PDB entry 5jsh: The 3D structure of recombinant [NiFeSe] hydrogenase from Desulfovibrio Vulgaris Hildenborough in the oxidized state at 1.30 Angstrom
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2016-05-08
Authors: Marques, M.C., Pereira, I.A.C., Matias, P.M.
PDB entry 5jsi: Structure of membrane protein
Classification: UNKNOWN FUNCTION
Source organism: Candidatus Actinomarina minuta
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-05-08
Authors: Melnikov, I., Polovinkin, V., Kovalev, K., Shevchenko, V., Gushchin, I., Popov, A., Gordeliy, V.
PDB entry 5jsj: Crystal structure of Spindlin1 bound to compound EML631
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.348 Å
Deposited: 2016-05-08
Authors: Su, X., Li, H.
PDB entry 5jsk: The 3D structure of [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough in the reduced state at 0.95 Angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2016-05-08
Authors: Marques, M.C., Pereira, I.A.C., Matias, P.M.
PDB entry 5jsl: The L16F mutant of cytochrome c prime from Alcaligenes xylosoxidans: Ferrous form
Classification: ELECTRON TRANSPORT
Source organism: Alcaligenes xylosoxydans xylosoxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2016-05-08
Authors: Kekilli, D., Strange, R.W., Hough, M.A.
PDB entry 5jsm: BRAFV600E Kinase Domain In Complex with Chemically Linked Vemurafenib Inhibitor VEM-3-VEM
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2016-05-08
Authors: Grasso, M.J., Marmorstein, R.
PDB entry 5jsn: Bcl2-inhibitor complex
Classification: Viral Protein/Inhibitor
Source organism: Homo sapiens; unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-05-09
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 5jso: Structures of DddQ from Ruegeria lac. Reveal Key Residues for Metal Binding and Catalysis - TRIS bound
Classification: LYASE
Source organism: Ruegeria lacuscaerulensis (strain DSM 11314 / KCTC 2953 / ITI-1157)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-05-09
Authors: Brummett, A.E., Dey, M.
PDB entry 5jsp: New Mechanistic Insight from Substrate and Product Bound Structures of the Metal-dependent Dimethylsulfoniopropionate Lyase DddQ
Classification: LYASE
Source organism: Ruegeria lacuscaerulensis (strain DSM 11314 / KCTC 2953 / ITI-1157)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-05-09
Authors: Brummett, A.E., Dey, M.
PDB entry 5jsq: Trypanosome brucei Hypoxanthine-guanine phosphoribosyltranferase in complex with a 9-[7-(phosphonoheptyl]guanine
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.503 Å
Deposited: 2016-05-09
Authors: Teran, D., Guddat, L.
PDB entry 5jsr: New Mechanistic Insight from Substrate and Product Bound Structures of the Metal-dependent Dimethylsulfoniopropionate Lyase DddQ
Classification: LYASE
Source organism: Ruegeria lacuscaerulensis (strain DSM 11314 / KCTC 2953 / ITI-1157)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-05-09
Authors: Brummett, A.E., Dey, M.
PDB entry 5jss: Thermolysin in complex with JC149.
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2016-05-09
Authors: Krimmer, S.G., Cramer, J., Heine, A., Klebe, G.
PDB entry 5jst: MBP fused MDV1 coiled coil
Classification: PROTEIN BINDING
Source organism: Escherichia coli; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2016-05-09
Authors: Kim, B.-W., Song, H.K.
PDB entry 5jsu: The 3D structure of the U489C variant of [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough in the oxidized state at 1.40 Angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2016-05-09
Authors: Marques, M.C., Pereira, I.A.C., Matias, P.M.
PDB entry 5jsv: tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-((((3aR,4R,6R,6aR)-6-methoxy-2,2-dimethyltetrahydrofuro[3,4-d][1,3]dioxol-4-yl)methyl)amino)-1H-imidazo[4,5-g]quinazolin-8(7H)-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2016-05-09
Authors: Ehrmann, F.R., Nguyen, D., Heine, A., Klebe, G.
PDB entry 5jsw: tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-((((3a'R,6'R,6a'R)-2,2,2',2'-tetramethyldihydro-3a'H-spiro[[1,3]dioxolane-4,4'-furo[3,4-d][1,3]dioxol]-6'-yl)methyl)amino)-1H-imidazo[4,5-g]quinazolin-8(7H)-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2016-05-09
Authors: Ehrmann, F.R., Nguyen, D., Heine, A., Klebe, G.
PDB entry 5jsx: Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+ and uridine-diphosphate-glucose (UDP-Glc)
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Ra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2016-05-09
Authors: Albesa-Jove, D., Sancho-Vaello, E., Rodrigo-Unzueta, A., Comino, N., Carreras-Gonzalez, A., Arrasate, P., Urresti, S., Guerin, M.E.
PDB entry 5jsy: The 3D structure of the Ni-reconstituted U489C variant of [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough at 1.04 Angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2016-05-09
Authors: Marques, M.C., Pereira, I.A.C., Matias, P.M.
PDB entry 5jsz: Folate ECF transporter: apo state
Classification: TRANSPORT PROTEIN
Source organism: Lactobacillus delbrueckii subsp. bulgaricus; Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / JCM 1002 / NBRC 13953 / NCIMB 11778)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.004 Å
Deposited: 2016-05-09
Authors: Swier, L.J.Y.M., Guskov, A., Slotboom, D.J.
PDB entry 5jt0: Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+, uridine-diphosphate (UDP) and glucosyl-3-phosphoglycerate (GPG) - GpgS*GPG*UDP*Mn2+
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-05-09
Authors: Albesa-Jove, D., Sancho-Vaello, E., Rodrigo-Unzueta, A., Comino, N., Carreras-Gonzalez, A., Arrasate, P., Urresti, S., Guerin, M.E.
PDB entry 5jt1: The 3D structure of Ni-reconstituted U489C variant of [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough in the oxidized state at 1.35 Angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2016-05-09
Authors: Marques, M.C., Pereira, I.A.C., Matias, P.M.
PDB entry 5jt2: BRAFV600E Kinase Domain In Complex with Chemically Linked Vemurafenib Inhibitor VEM-BISAMIDE
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.702 Å
Deposited: 2016-05-09
Authors: Grasso, M.J., Marmorstein, R.
PDB entry 5jt4: L16A mutant of cytochrome c prime from Alcaligenes xylosoxidans: Ferrous state
Classification: ELECTRON TRANSPORT
Source organism: Alcaligenes xylosoxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2016-05-09
Authors: Kekilli, D., Strange, R.W., Hough, M.A.
PDB entry 5jt5: tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 2-((2-morpholinoethyl)amino)-1H-benzo[d]imidazole-5-carboxamide
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2016-05-09
Authors: Ehrmann, F.R., Heine, A., Klebe, G.
PDB entry 5jt6: tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 2-((2-morpholinoethyl)amino)-1H-benzo[d]imidazole-5-carbohydrazide
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2016-05-09
Authors: Ehrmann, F.R., Heine, A., Klebe, G.
PDB entry 5jt7: tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 1-(2-((2-morpholinoethyl)amino)-1H-benzo[d]imidazol-6-yl)guanidine
Classification: TRANSFERASE
Source organism: Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-05-09
Authors: Ehrmann, F.R., Heine, A., Klebe, G.
PDB entry 5jt8: Structural basis for the limited antibody cross reactivity between the mite allergens Blo t 1 and Der p 1
Classification: ALLERGEN
Source organism: Blomia tropicalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-05-09
Authors: Meno, K., Kastrup, J.S., Gajhede, M.
PDB entry 5jt9: Thermolysin in complex with JC106.
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2016-05-09
Authors: Krimmer, S.G., Cramer, J., Heine, A., Klebe, G.
PDB entry 5jta: Neutral trehalase Nth1 from Saccharomyces cerevisiae
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2016-05-09
Authors: Alblova, M., Smidova, A., Obsilova, V., Obsil, T.
PDB entry 5jtb: Crystal structure of the chimeric protein of A2aAR-BRIL with bound iodide ions
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-05-09
Authors: Melnikov, I., Polovinkin, V., Shevtsov, M., Borshchevskiy, V., Cherezov, V., Popov, A., Gordeliy, V.
PDB entry 5jtc: Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese, 2,4-pyridine dicarboxylate and factor X substrate peptide fragment(39mer-4Ser)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2016-05-09
Authors: McDonough, M.A., Pfeffer, I.
PDB entry 5jtd: Crystal structure of the Ru(bpy)2PhenA functionalized P450 BM3 L407C heme domain mutant in complex with DMSO.
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-05-09
Authors: Kloos, M.
PDB entry 5jte: Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2016-05-09
Authors: Arenz, S., Bock, L.V., Graf, M., Innis, C.A., Beckmann, R., Grubmueller, H., Vaiana, A.C., Wilson, D.N.
PDB entry 5jtf: Crystal structure of ArsN N-acetyltransferase from Pseudomonas putida KT2440
Classification: TRANSFERASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.156 Å
Deposited: 2016-05-09
Authors: Venkadesh, S., Dheeman, D.S., Kandavelu, P., Rosen, B.P.
PDB entry 5jtg: Crystal structure of Thermotoga maritima mutant D89K/D253K
Classification: TRANSPORT PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2016-05-09
Authors: Kowatz, T., Maguire, M.
PDB entry 5jth: Crystal structure of E67A calmodulin - CaM:RM20 analog complex
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2016-05-09
Authors: Grum-Tokars, V.L., Minasov, G., Anderson, W.F., Watterson, D.M.
PDB entry 5jti: Crystal structure of the human Tankyrase 1 (TNKS) SAM domain (D1055R), crystal form 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2016-05-09
Authors: Guetter, S., Mariotti, L., Cronin, N.
PDB entry 5jtj: USP7CD-CTP in complex with Ubiquitin
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.321 Å
Deposited: 2016-05-09
Authors: Murray, J.M., Rouge, L.
PDB entry 5jtk: NMR structure of Uncharacterized protein from Pseudomonas aeruginosa PAO1
Classification: UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Experimental method: SOLUTION NMR
Deposited: 2016-05-09
Authors: Barnwal, R.P., Varani, G., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5jtl: The structure of chaperone SecB in complex with unstructured proPhoA
Classification: CHAPERONE/HYDROLASE
Source organism: Escherichia coli (strain K12); Escherichia coli O157:H7
Experimental method: SOLUTION NMR
Deposited: 2016-05-09
Authors: Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.
PDB entry 5jtm: The structure of chaperone SecB in complex with unstructured PhoA binding site a
Classification: CHAPERONE/HYDROLASE
Source organism: Escherichia coli (strain 55989 / EAEC); Escherichia coli (strain K12)
Experimental method: SOLUTION NMR
Deposited: 2016-05-09
Authors: Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.
PDB entry 5jtn: The structure of chaperone SecB in complex with unstructured proPhoA binding site c
Classification: CHAPERONE/HYDROLASE
Source organism: Escherichia coli (strain K12); Escherichia coli O157:H7
Experimental method: SOLUTION NMR
Deposited: 2016-05-09
Authors: Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.
PDB entry 5jto: The structure of chaperone SecB in complex with unstructured proPhoA binding site d
Classification: CHAPERONE/HYDROLASE
Source organism: Escherichia coli (strain K12); Escherichia coli O157:H7
Experimental method: SOLUTION NMR
Deposited: 2016-05-09
Authors: Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.
PDB entry 5jtp: The structure of chaperone SecB in complex with unstructured proPhoA binding site e
Classification: CHAPERONE/HYDROLASE
Source organism: Escherichia coli (strain K12); Escherichia coli O157:H7
Experimental method: SOLUTION NMR
Deposited: 2016-05-09
Authors: Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.
PDB entry 5jtq: The structure of chaperone SecB in complex with unstructured MBP binding site d
Classification: CHAPERONE/PROTEIN BINDING
Source organism: Escherichia coli O157:H7
Experimental method: SOLUTION NMR
Deposited: 2016-05-09
Authors: Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.
PDB entry 5jtr: The structure of chaperone SecB in complex with unstructured MBP binding site e
Classification: CHAPERONE/PROTEIN BINDING
Source organism: Escherichia coli O157:H7
Experimental method: SOLUTION NMR
Deposited: 2016-05-09
Authors: Huang, C., Saio, T., Rossi, P., Kalodimos, C.G.
PDB entry 5jts: Structure of a beta-1,4-mannanase, SsGH134.
Classification: HYDROLASE
Source organism: Streptomyces sp. nrrl B-244
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2016-05-09
Authors: Jin, Y., Petricevic, M., Goddard-Borger, E.D., Williams, S.J., Davies, G.J.
PDB entry 5jtt: Crystal structure of GPb in complex with 8a
Classification: TRANSFERASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-05-09
Authors: Kantsadi, A.L., Stravodimos, G.A., Chatzileontiadou, D.S.M., Leonidas, D.D.
PDB entry 5jtu: Crystal structure of GPb in complex with 8b
Classification: TRANSFERASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-05-09
Authors: Kantsadi, A.L., Stravodimos, G.A., Chatzileontiadou, D.S.M., Leonidas, D.D.
PDB entry 5jtv: USP7CD-UBL45 in complex with Ubiquitin
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.312 Å
Deposited: 2016-05-09
Authors: Murray, J.M., Rouge, L.
PDB entry 5jtw: Crystal structure of complement C4b re-refined using iMDFF
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2016-05-09
Authors: Croll, T.I., Andersen, G.R.
PDB entry 5jty: Glutamate- and DCKA-bound GluN1/GluN2A agonist binding domains with MPX-007
Classification: TRANSPORT PROTEIN, RECEPTOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2016-05-10
Authors: Mou, T.-C., Sprang, S.R., Hansen, K.B.
PDB entry 5ju4: Crystal structure of a DNA sequence d(CGTGAATTCACG) at 130K
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-05-10
Authors: Sbirkova, H., Schivachev, B.
PDB entry 5ju5: Crystal structure of the human Tankyrase 1 (TNKS) SAM domain (D1055R), crystal form 1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-05-10
Authors: Guetter, S., Mariotti, L., Cronin, N.
PDB entry 5ju6: Structural and Functional Studies of Glycoside Hydrolase Family 3 beta-Glucosidase Cel3A from the Moderately Thermophilic Fungus Rasamsonia emersonii
Classification: HYDROLASE
Source organism: Talaromyces emersonii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-05-10
Authors: Gudmundsson, M., Sandgren, M., Karkehabadi, S.
PDB entry 5ju7: DNA BINDING DOMAIN OF E.COLI CADC
Classification: TRANSCRIPTION
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2016-05-10
Authors: Janowski, R., Schlundt, A., Sattler, M., Niessing, D.
PDB entry 5ju8: Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12); Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2016-05-10
Authors: Arenz, S., Bock, L.V., Graf, M., Innis, C.A., Beckmann, R., Grubmueller, H., Vaiana, A.C., Wilson, D.N.
PDB entry 5ju9: Structure of a beta-1,4-mannanase, SsGH134, in complex with Man3.
Classification: HYDROLASE
Source organism: Streptomyces sp. NRRL B-24361
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2016-05-10
Authors: Jin, Y., Petricevic, M., Goddard-Borger, E.D., Williams, S.J., Davies, G.J.
PDB entry 5jua: Nitric oxide complex of the L16I mutant of cytochrome c prime from Alcaligenes xylosoxidans
Classification: ELECTRON TRANSPORT
Source organism: Alcaligenes xylosoxydans xylosoxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2016-05-10
Authors: Kekilli, D., Strange, R.W., Hough, M.A.
PDB entry 5jub: Crystal structure of ComR from S.thermophilus in complex with DNA and its signalling peptide ComS.
Classification: TRANSCRIPTION
Source organism: Streptococcus thermophilus LMD-9; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2016-05-10
Authors: Talagas, A., Fontaine, L., Ledesma-Garcia, L., Li de la Sierra-Gallay, I., Hols, P., Nessler, S.
PDB entry 5juc: Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+, uridine-diphosphate (UDP) and glucosyl-3-phosphoglycerate (GPG) - GpgS*GPG*UDP*Mn2+_2
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-05-10
Authors: Albesa-Jove, D., Sancho-Vaello, E., Rodrigo-Unzueta, A., Comino, N., Carreras-Gonzalez, A., Arrasate, P., Urresti, S., Guerin, M.E.
PDB entry 5jud: Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with uridine-diphosphate (UDP) - GpgS*UDP
Classification: TRANSFERASE
Source organism: Mycobacterium bovis AF2122/97
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2016-05-10
Authors: Albesa-Jove, D., Sancho-Vaello, E., Rodrigo-Unzueta, A., Comino, N., Carreras-Gonzalez, A., Arrasate, P., Urresti, S., Guerin, M.E.
PDB entry 5jue: Crystal Structure of UIC2 Fab
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-05-10
Authors: Xia, D., Esser, L.
PDB entry 5juf: Crystal structure of the apo form of ComR from S. thermophilus.
Classification: TRANSCRIPTION
Source organism: Streptococcus thermophilus LMD-9
Experimental method: X-RAY DIFFRACTION
Resolution: 1.946 Å
Deposited: 2016-05-10
Authors: Talagas, A., Fontaine, L., Ledesma, L., Li de la Sierra-Gallay, I., Hols, P., Nessler, S.
PDB entry 5jug: Structure of an inactive (E45Q) variant of a beta-1,4-mannanase, SsGH134, in complex with Man5
Classification: HYDROLASE
Source organism: Streptomyces sp. NRRL B-16215
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2016-05-10
Authors: Jin, Y., Petricevic, M., Goddard-Borger, E.D., Williams, S.J., Davies, G.J.
PDB entry 5juh: Crystal structure of C-terminal domain (RV) of MpAFP
Classification: CELL ADHESION
Source organism: Marinomonas primoryensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2016-05-10
Authors: Guo, S.
PDB entry 5jui: domain-swapped dimer of the the KRT10-binding region (BR) of PsrP
Classification: STRUCTURAL PROTEIN
Source organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-05-10
Authors: Schulte, T., Mikaelsson, C., Achour, A.
PDB entry 5jul: Near atomic structure of the Dark apoptosome
Classification: APOPTOSIS
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2016-05-10
Authors: Cheng, T.C., Akey, I.V., Yuan, S., Yu, Z., Ludtke, S.J., Akey, C.W.
PDB entry 5jum: Crystal Structure of Human DNA Polymerase Eta Inserting dCTP Opposite N-(2'-deoxyguanosin-8- yl)-3-aminobenzanthrone (C8-dG-ABA)
Classification: transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-05-10
Authors: Patra, A., Politica, D.A., Stone, M.P., Egli, M.
PDB entry 5jun: PB2 bound to an azaindole inhibitor
Classification: RNA BINDING PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2016-05-10
Authors: Jacobs, M.D.
PDB entry 5juo: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2016-05-10
Authors: Abeyrathne, P., Koh, C.S., Grant, T., Grigorieff, N., Korostelev, A.A.
PDB entry 5jup: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2016-05-10
Authors: Abeyrathne, P., Koh, C.S., Grant, T., Grigorieff, N., Korostelev, A.A.
PDB entry 5jur: PB2 bound to an azaindole inhibitor
Classification: RNA BINDING PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.93 Å
Deposited: 2016-05-10
Authors: Jacobs, M.D.
PDB entry 5jus: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2016-05-10
Authors: Abeyrathne, P., Koh, C.S., Grant, T., Grigorieff, N., Korostelev, A.A.
PDB entry 5jut: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2016-05-10
Authors: Abeyrathne, P., Koh, C.S., Grant, T., Grigorieff, N., Korostelev, A.A.
PDB entry 5juu: Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2016-05-10
Authors: Abeyrathne, P., Koh, C.S., Grant, T., Grigorieff, N., Korostelev, A.A.
PDB entry 5juv: STRUCTURE OF E298Q-BETA-GALACTOSIDASE FROM ASPERGILLUS NIGER IN COMPLEX WITH 6-b-Galactopyranosyl galactose
Classification: HYDROLASE
Source organism: Aspergillus niger CBS 513.88
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2016-05-10
Authors: Rico-Diaz, A., Ramirez-Escudero, M., Vizoso Vazquez, A., Cerdan, M.E., Becerra, M., Sanz-Aparicio, J.
PDB entry 5juw: complex of Dot1l with SS148
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2016-05-10
Authors: Yu, W., Tempel, W., Li, Y., Spurr, S.S., Bayle, E.D., Fish, P.V., Schapira, M., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Brown, P.J., Structural Genomics Consortium (SGC)
PDB entry 5juy: Active human apoptosome with procaspase-9
Classification: APOPTOSIS
Source organism: Bos taurus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2016-05-10
Authors: Cheng, T.C., Hong, C., Akey, I.V., Yuan, S., Akey, C.W.
PDB entry 5juz: Crystal structure of human FPPS in complex with an allosteric inhibitor CL-06-057
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-05-10
Authors: Park, J., Magder, A., Leung, C.Y., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 5jv0: Crystal structure of human FPPS in complex with an allosteric inhibitor CL-08-038
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-05-10
Authors: Park, J., Leung, C.Y., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 5jv1: Crystal structure of human FPPS in complex with an allosteric inhibitor CL-08-066
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-05-10
Authors: Park, J., Leung, C.Y., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 5jv2: Crystal structure of human FPPS in complex with an allosteric inhibitor MIT-01-055
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-05-10
Authors: Park, J., Magder, A., Tsakos, M., Tsantrizos, Y.S., Berghuis, A.M.
PDB entry 5jv3: The neck-linker and alpha 7 helix of Homo sapiens Eg5 fused to EB1
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.006 Å
Deposited: 2016-05-10
Authors: Phillips, R.K., Rayment, I.
PDB entry 5jv4: Structure of F420 binding protein, MSMEG_6526, from Mycobacterium smegmatis with F420 bound
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-05-10
Authors: Lee, B.M., Carr, P.D., Jackson, C.J.
PDB entry 5jv5: Trypanosome brucei Hypoxanthine-guanine phosphoribosyltranferase in complex with Guanosine 5' monophosphate
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2016-05-10
Authors: Teran, D., Guddat, L.
PDB entry 5jva: 1.95 angstrom crystal structure of TAGRFP-T
Classification: FLUORESCENT PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-05-11
Authors: Hu, X.J.
PDB entry 5jvb: 1.95A resolution structure of PtxB from Trichodesmium erythraeum IMS101 in complex with phosphite
Classification: TRANSPORT PROTEIN
Source organism: Trichodesmium erythraeum (strain IMS101)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-05-11
Authors: Bisson, C., Adams, N.B.P., Polyviou, D., Bibby, T.S., Hunter, C.N., Hitchcock, A.
PDB entry 5jvd: Tubulin-TUB092 complex
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.393 Å
Deposited: 2016-05-11
Authors: Canela, M.-D., Noppen, S., Bueno, O., Prota, A.E., Bargsten, K., Saez-Calvo, G., Jimeno, M.-L., Benkheil, M., Ribatti, D., Velazquez, S., Camarasa, M.-J., Diaz, J.F., Steinmetz, M.O., Priego, E.-M., Perez-Perez, M.-J., Liekens, S.
PDB entry 5jve: L16I mutant of cytochrome c prime from Alcaligenes xylosoxidans: Ferrous state
Classification: ELECTRON TRANSPORT
Source organism: Alcaligenes xylosoxydans xylosoxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2016-05-11
Authors: Kekilli, D., Strange, R.W., Hough, M.A.
PDB entry 5jvf: Crystal Structure of Apo-FleN
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2016-05-11
Authors: Jain, D., Chanchal, Banerjee, P.
PDB entry 5jvg: The large ribosomal subunit from Deinococcus radiodurans in complex with avilamycin
Classification: RIBOSOME
Source organism: Deinococcus radiodurans; Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422); Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.428 Å
Deposited: 2016-05-11
Authors: Krupkin, M., Wekselman, I., Matzov, D., Eyal, Z., Diskin Posner, Y., Rozenberg, H., Zimmerman, E., Bashan, A., Yonath, A.
PDB entry 5jvh: The crystal structure large ribosomal subunit (50S) of Deinococcus radiodurans in complex with evernimicin
Classification: RIBOSOME
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.58 Å
Deposited: 2016-05-11
Authors: Yonath, A.
PDB entry 5jvi: Thermolysin in complex with JC148.
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2016-05-11
Authors: Krimmer, S.G., Cramer, J., Heine, A., Klebe, G.
PDB entry 5jvj: C4-type pyruvate phosphate dikinase: different conformational states of the nucleotide binding domain in the dimer
Classification: TRANSFERASE
Source organism: Flaveria trinervia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.898 Å
Deposited: 2016-05-11
Authors: Minges, A., Hoeppner, A., Groth, G.
PDB entry 5jvk: Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2.
Classification: HYDROLASE
Source organism: Bacteroides cellulosilyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-05-11
Authors: Ali-Ahmad, A., Garron, M.L., Zamboni, V., Lenfant, N., Bourne, Y., Vincent, F.
PDB entry 5jvl: C4-type pyruvate phospate dikinase: nucleotide binding domain with bound ATP analogue
Classification: TRANSFERASE
Source organism: Flaveria trinervia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2016-05-11
Authors: Minges, A., Hoeppner, A., Groth, G.
PDB entry 5jvm: The neck-linker and alpha 7 helix of Mus musculus KIF3C
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.567 Å
Deposited: 2016-05-11
Authors: Phillips, R.K., Rayment, I.
PDB entry 5jvn: C3-type pyruvate phosphate dikinase: intermediate state of the central domain in the swiveling mechanism
Classification: TRANSFERASE
Source organism: Flaveria pringlei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2016-05-11
Authors: Minges, A., Hoeppner, A., Groth, G.
PDB entry 5jvo: Crystal structure of the Arginine Repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis
Classification: DNA BINDING PROTEIN
Source organism: Corynebacterium pseudotuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-05-11
Authors: Mariutti, R.B., Ullah, A., Murakami, M.T., Arni, R.K.
PDB entry 5jvp: The neck-linker and alpha 7 helix of Homo sapiens CENP-E
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-05-11
Authors: Phillips, R.K., Rayment, I.
PDB entry 5jvr: The neck-linker of Mus musculus KIF3A fused to the alpha 7 helix of Drosophila melanogaster Kinesin-1 fused to EB1
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster; Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-05-11
Authors: Phillips, R.K., Rayment, I.
PDB entry 5jvs: The neck-linker + DAL and alpha 7 helix of Drosophila melanogaster Kinesin-1 fused to EB1
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.248 Å
Deposited: 2016-05-11
Authors: Phillips, R.K., Rayment, I.
PDB entry 5jvt: Crystal structure of the DNA binding domain of transcription factor FLI1 in complex with an 11-mer DNA GACCGGAAGTG
Classification: transcription/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2016-05-11
Authors: Hou, C., Tsodikov, O.V.
PDB entry 5jvu: The neck-linker and alpha 7 helix of Drosophila melanogaster kinesin-1 fused to EB1
Classification: MOTOR PROTEIN
Source organism: Drosophila melanogaster; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.948 Å
Deposited: 2016-05-11
Authors: Phillips, R.K., Rayment, I.