LiteFold/PDB huggingface dataset:
PDB entry 7uvr: Crystal structure of human ClpP protease in complex with TR-65
Classification: HYDROLASE/AGONIST
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2022-05-02
Authors: Mabanglo, M.F., Houry, W.A.
PDB entry 7uvs: Pfs230 domain 1 bound by LMIV230-02 Fab
Classification: CELL INVASION/IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2022-05-02
Authors: Ivanochko, D., Julien, J.P.
PDB entry 7uvt: Kinetically trapped misfolded state of the Tetrahymena ribozyme
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-05-02
Authors: Bonilla, S.L., Vicens, Q., Kieft, J.S.
PDB entry 7uvu: Crystal structure of human ClpP protease in complex with TR-107
Classification: HYDROLASE/AGONIST
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.24 Å
Deposited: 2022-05-02
Authors: Mabanglo, M.F., Houry, W.A.
PDB entry 7uvv: A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA
Classification: Ribosome/RNA
Source organism: Acinetobacter baumannii AB0057
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-05-02
Authors: Morgan, C.E., Yu, E.W.
PDB entry 7uvw: A. baumannii ribosome: 70S with E-site tRNA
Classification: Ribosome/RNA
Source organism: Acinetobacter baumannii AB0057
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2022-05-02
Authors: Morgan, C.E., Yu, E.W.
PDB entry 7uvx: A. baumannii 70S ribosome-Streptothricin-F complex
Classification: Ribosome/RNA
Source organism: Acinetobacter baumannii AB0057
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2022-05-02
Authors: Morgan, C.E., Yu, E.W.
PDB entry 7uvy: A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
Classification: Ribosome/RNA
Source organism: Acinetobacter baumannii AB0057
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2022-05-02
Authors: Morgan, C.E., Yu, E.W.
PDB entry 7uvz: A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
Classification: Ribosome/RNA
Source organism: Acinetobacter baumannii AB0057
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2022-05-02
Authors: Morgan, C.E., Yu, E.W.
PDB entry 7uw0: Crystal structure of human ClpP protease in complex with TR-133
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-05-02
Authors: Mabanglo, M.F., Houry, W.A.
PDB entry 7uw1: A. baumannii 70S ribosome-Streptothricin-D complex
Classification: Ribosome/RNA
Source organism: Acinetobacter baumannii AB0057
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2022-05-02
Authors: Morgan, C.E., Yu, E.W.
PDB entry 7uw2: Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with UAB116 and coactivator peptide GRIP-1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-05-02
Authors: Chattopadhyay, D., Yang, Z., Atigadda, V.
PDB entry 7uw3: Structure of SARS-CoV-2 Nucleocapsid Protein N-Terminal Domain
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-05-02
Authors: Calero, G.
PDB entry 7uw4: Crystal structure of human Retinoid X receptor alpha ligand binding domain complex with UAB113 and coactivator peptide GRIP-1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-05-02
Authors: Chattopadhyay, D., Yang, Z., Atigadda, V.
PDB entry 7uw5: EcMscK G924S mutant in a closed conformation
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2022-05-02
Authors: Mount, J.W., Yuan, P.
PDB entry 7uw6: The co-crystal structure of low molecular weight protein tyrosine phosphatase (LMW-PTP) with a small molecule inhibitor SPAA-2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-05-02
Authors: Wang, J., Zhang, Z.Y.
PDB entry 7uw8: Drosophila melanogaster setdb1-tuor domain
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-05-03
Authors: Zhou, M., Dong, A., Liu, K., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 7uw9: Citrus V-ATPase State 1, H in contact with subunit a
Classification: MEMBRANE PROTEIN
Source organism: Citrus limon
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-05-03
Authors: Keon, K.A., Abdelaziz, R.A., Schulze, W.X., Schumacher, K., Rubinstein, J.L.
PDB entry 7uwa: Citrus V-ATPase State 1, H in contact with subunits AB
Classification: MEMBRANE PROTEIN
Source organism: Citrus limon
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2022-05-03
Authors: Abdelaziz, R.A., Keon, K.A., Schulze, W.X., Schumacher, K., Rubinstein, J.L.
PDB entry 7uwb: Citrus V-ATPase State 2, Highest-Resolution Class
Classification: MEMBRANE PROTEIN
Source organism: Citrus limon
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-05-03
Authors: Keon, K.A., Abdelaziz, R.A., Schulze, W.X., Schumacher, K., Rubinstein, J.L.
PDB entry 7uwc: Citrus V-ATPase State 2, H in contact with subunit a
Classification: MEMBRANE PROTEIN
Source organism: Citrus limon
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-05-03
Authors: Keon, K.A., Abdelaziz, R.A., Schulze, W.X., Schumacher, K., Rubinstein, J.L.
PDB entry 7uwd: Citrus V-ATPase State 2, H in contact with subunits AB
Classification: MEMBRANE PROTEIN
Source organism: Citrus limon
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-05-03
Authors: Keon, K.A., Abdelaziz, R.A., Schulze, W.X., Schumacher, K., Rubinstein, J.L.
PDB entry 7uwe: CryoEM Structure of E. coli Transcription-Coupled Ribonucleotide Excision Repair (TC-RER) complex
Classification: TRANSFERASE/HYDROLASE/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-05-03
Authors: Hao, Z.T., Grower, M., Bharati, B., Proshkin, S., Epshtein, V., Svetlov, V., Nudler, E., Shamovsky, I.
PDB entry 7uwf: Human Rix1 sub-complex scaffold
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-05-03
Authors: Gordon, J., Stanley, R.E.
PDB entry 7uwg: The crystal structure of the TIR domain-containing protein from Acinetobacter baumannii (AbTir)
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2022-05-03
Authors: Manik, M.K., Nanson, J.D., Ve, T., Kobe, B.
PDB entry 7uwh: CryoEM Structure of E. coli Transcription-Coupled Ribonucleotide Excision Repair (TC-RER) complex bound to ribonucleotide substrate
Classification: TRANSFERASE/HYDROLASE/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-05-03
Authors: Hao, Z.T., Grower, M., Bharati, B., Proshkin, S., Epshtein, V., Svetlov, V., Nudler, E., Shamovsky, I.
PDB entry 7uwi: Structure of beta-catenin in complex with FP01567, a Helicon Polypeptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-05-03
Authors: Brennan, M., Agarwal, S., Thomson, T., Wahl, S., Ramirez, J., Verdine, G., McGee, J.
PDB entry 7uwj: Structure of the homodimeric IL-25-IL-17RB binary complex
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-03
Authors: Wilson, S.C., Caveney, N.A., Jude, K.M., Garcia, K.C.
PDB entry 7uwk: Structure of the higher-order IL-25-IL-17RB complex
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-05-03
Authors: Wilson, S.C., Caveney, N.A., Jude, K.M., Garcia, K.C.
PDB entry 7uwl: Structure of the IL-25-IL-17RB-IL-17RA ternary complex
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-05-03
Authors: Wilson, S.C., Caveney, N.A., Jude, K.M., Garcia, K.C.
PDB entry 7uwm: Structure of the IL-17A-IL-17RA binary complex
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-05-03
Authors: Wilson, S.C., Caveney, N.A., Jude, K.M., Garcia, K.C.
PDB entry 7uwn: Structure of the IL-17A-IL-17RA-IL-17RC ternary complex
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2022-05-03
Authors: Wilson, S.C., Caveney, N.A., Jude, K.M., Garcia, K.C.
PDB entry 7uwo: Structure of beta-catenin in complex with FP05874, a Helicon Polypeptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-05-03
Authors: Agarwal, S., Thomson, T., Wahl, S., Ramirez, J., Hriniak, B., Verdine, G., McGee, J.
PDB entry 7uwp: Detergent-bound CYP51 from Acanthamoeba castellanii
Classification: OXIDOREDUCTASE
Source organism: Acanthamoeba castellanii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-05-03
Authors: Hargrove, T.Y., Wawrzak, Z., Lepesheva, G.I.
PDB entry 7uwq: Klebsiella pneumoniae adenosine monophosphate nucleosidase
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2022-05-03
Authors: Richardson, B.C., French, J.B.
PDB entry 7uwr: KSQ+AT from first module of the pikromycin synthase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces venezuelae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2022-05-03
Authors: Keatinge-Clay, A.T., Dickinson, M.S., Miyazawa, T., McCool, R.S.
PDB entry 7uws: Atomic model of the partial VSV nucleocapsid
Classification: VIRAL PROTEIN/RNA
Source organism: Vesicular stomatitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2022-05-03
Authors: Zhou, K., Si, Z., Ge, P., Tsao, J., Luo, M., Zhou, Z.H.
PDB entry 7uwt: Structure of Oxygen-Insensitive NAD(P)H-dependent Nitroreductase NfsB_Vv F70A/F108Y (NTR 2.0) in complex with FMN at 1.85 Angstroms resolution
Classification: OXIDOREDUCTASE
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-05-03
Authors: Sharrock, A.V., Arcus, V., Mumm, J.S., Ackerley, D.F.
PDB entry 7uwu: Starch adherence system protein 6 (Sas6)
Classification: SUGAR BINDING PROTEIN
Source organism: Ruminococcus bromii L2-63
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-05-04
Authors: Photenhauer, A.L., Koropatkin, N.M.
PDB entry 7uwv: CBM74 from Ruminococcus bromii Sas6 with maltodecaose
Classification: SUGAR BINDING PROTEIN
Source organism: Ruminococcus bromii L2-63
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-05-04
Authors: Photenhauer, A.L., Koropatkin, N.M.
PDB entry 7uww: Sas6 with alpha-cyclodextrin
Classification: SUGAR BINDING PROTEIN
Source organism: Ruminococcus bromii L2-63
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2022-05-04
Authors: Photenhauer, A.L., Koropatkin, N.M.
PDB entry 7uwy: NMR solution structure of the De novo designed small beta-barrel protein 29_bp_sh3
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2022-05-04
Authors: Peterson, F.C., Kim, D.E., Jensen, D.R., Saleem, A., Chow, C.M., Volkman, B.F., Baker, D.
PDB entry 7uwz: NMR solution structure of the De novo designed small beta-barrel protein 33_bp_sh3
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2022-05-04
Authors: Peterson, F.C., Kim, D.E., Jensen, D.R., Saleem, A., Chow, C.M., Volkman, B.F., Baker, D.
PDB entry 7ux0: Human Sperm TMEM95 Ectodomain
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-05-04
Authors: Tang, S., Kim, P.S.
PDB entry 7ux1: EcMscK in an Open Conformation
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2022-05-04
Authors: Mount, J.W., Yuan, P.
PDB entry 7ux2: cryo-EM structure of the Raptor-TFEB-Rag-Ragulator complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-05-04
Authors: Cui, Z., Hurley, J.
PDB entry 7ux3: Asymmetric unit of AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated narrow membrane tubes
Classification: VIRAL PROTEIN/PROTEIN TRANSPORT
Source organism: Homo sapiens; Human immunodeficiency virus 1; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.6 Å
Deposited: 2022-05-04
Authors: Hooy, R.M., Hurley, J.H.
PDB entry 7ux4: Crystallographic snapshots of ternary complexes of thermophilic secondary alcohol dehydrogenase from Thermoanaerobacter pseudoethanolicus reveal the dynamics of ligand exchange and the proton relay network.
Classification: LYASE
Source organism: Thermoanaerobacter pseudethanolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2022-05-04
Authors: Phillips, R.S., Dinh, T.
PDB entry 7ux5: Structure of PDL1 in complex with FP28136, a Helicon Polypeptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2022-05-05
Authors: Agarwal, S., Li, K., Tokareva, O., Thomson, T., Travaline, T., Wahl, S., Verdine, G., McGee, J.
PDB entry 7ux6: Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH bound at 1.35 A resolution (P212121 - form I)
Classification: TRANSFERASE
Source organism: Streptomyces drozdowiczii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2022-05-05
Authors: Miller, M.D., Wu, K.-L., Xu, W., Xiao, H., Philips Jr., G.N.
PDB entry 7ux7: Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH bound at 1.2 A resolution (P212121 - form II)
Classification: TRANSFERASE
Source organism: Streptomyces drozdowiczii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2022-05-05
Authors: Miller, M.D., Wu, K.-L., Xu, W., Xiao, H., Philips Jr., G.N.
PDB entry 7ux8: Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH and L-Tyrosine bound at 1.4 A resolution (P212121 - form II)
Classification: TRANSFERASE
Source organism: Streptomyces drozdowiczii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-05-05
Authors: Miller, M.D., Wu, K.-L., Xu, W., Xiao, H., Philips Jr., G.N.
PDB entry 7ux9: Arabidopsis DDM1 bound to nucleosome (H2A.W, H2B, H3.3, H4, with 147 bp DNA)
Classification: GENE REGULATION
Source organism: Arabidopsis thaliana; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-05
Authors: Ipsaro, J.J., Adams, D.W., Joshua-Tor, L.
PDB entry 7uxa: Human tRNA Splicing Endonuclease Complex bound to pre-tRNA-ARG
Classification: SPLICING/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2022-05-05
Authors: Stanley, R.E., Hayne, C.K.
PDB entry 7uxb: Human triosephosphate isomerase mutant G122R
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-05-05
Authors: Romero, J.M.
PDB entry 7uxc: cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex with symmetry expansion
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-05
Authors: Cui, Z., Hurley, J.
PDB entry 7uxd: Crystal structure of APOBEC3G Catalytic domain complex with ssDNA containing 2'-deoxy Zebularine.
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-05-05
Authors: Maiti, A., Matsuo, H.
PDB entry 7uxe: Pseudomonas phage E217 small terminase (TerS)
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas phage vB_PaeM_E217
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2022-05-05
Authors: Lokareddy, R.K., Hou, C.-F.D., Doll, S.G., Li, F., Gillilan, R., Forti, F., Briani, F., Cingolani, G.
PDB entry 7uxf: Cryogenic electron microscopy 3D map of F-actin
Classification: CELL ADHESION
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-05-05
Authors: Rangarajan, E.S., Smith, E.W., Izard, T.
PDB entry 7uxg: Crystal structure of putative serine protease YdgD from Escherichia coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2022-05-05
Authors: Stogios, P.J., Michalska, K., Skarina, T., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7uxh: cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-05
Authors: Cui, Z., Hurley, J.
PDB entry 7uxi: Structure of CDK2 in complex with FP19711, a Helicon Polypeptide
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2022-05-05
Authors: Li, K., Agarwal, S., Tokareva, O., Thomson, T., Wahl, S., Verdine, G., McGee, J.
PDB entry 7uxj: Structure of PPIA in complex with FP29102, a Helicon Polypeptide
Classification: ISOMERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2022-05-05
Authors: Li, K., Agarwal, S., Tokareva, O., Thomson, T., Wahl, S., Verdine, G., McGee, J.
PDB entry 7uxk: Structure of CDK2 in complex with FP24322, a Helicon Polypeptide
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2022-05-05
Authors: Li, K., Agarwal, S., Tokareva, O., Thomson, T., Wahl, S., Verdine, G., McGee, J.
PDB entry 7uxl: Crystal structure of malaria transmission-blocking antigen Pfs48/45-6C variant in complex with human antibodies RUPA-44 and RUPA-29
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2022-05-05
Authors: Hailemariam, S., Ivanochko, D., Julien, J.P.
PDB entry 7uxm: Structure of PPIA in complex with FP29092, a Helicon Polypeptide
Classification: ISOMERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-05-05
Authors: Li, K., Agarwal, S., Tokareva, O., Thomson, T., Wahl, S., Verdine, G., McGee, J.
PDB entry 7uxn: Structure of PPIA in complex with FP29103, a Helicon Polypeptide
Classification: ISOMERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2022-05-05
Authors: Li, K., Agarwal, S., Tokareva, O., Thomson, T., Tattersfield, H., Wahl, S., Verdine, G., McGee, J.
PDB entry 7uxo: Structure of PDL1 in complex with FP30790, a Helicon Polypeptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-05-05
Authors: Li, K., Agarwal, S., Tokareva, O., Thomson, T., Travaline, T., Tattersfield, H., Wahl, S., Verdine, G., McGee, J.
PDB entry 7uxp: Structure of PDL1 in complex with FP28132, a Helicon Polypeptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2022-05-05
Authors: Li, K., Agarwal, S., Tokareva, O., Thomson, T., Travaline, T., Tattersfield, H., Wahl, S., Verdine, G., McGee, J.
PDB entry 7uxq: Structure of PDL1 in complex with FP28135, a Helicon Polypeptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2022-05-05
Authors: Li, K., Agarwal, S., Tokareva, O., Thomson, T., Travaline, T., Wahl, S., Verdine, G., McGee, J.
PDB entry 7uxr: Crystal structure of the BtTir TIR domain
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2022-05-06
Authors: Shi, Y., Masic, V., Mosaiab, T., Vasquez, E., Ve, T.
PDB entry 7uxs: Crystal structure of the BcThsA SLOG domain in complex with 3'cADPR
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-05-06
Authors: Shi, Y., Masic, V., Mosaiab, T., Ve, T.
PDB entry 7uxt: Crystal structure of ligand-free SeThsA
Classification: HYDROLASE
Source organism: Streptococcus equi
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2022-05-06
Authors: Shi, Y., Masic, V., Mosaiab, T., Nanson, J.D., Kobe, B., Ve, T.
PDB entry 7uxu: CryoEM structure of the TIR domain from AbTir in complex with 3AD
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2022-05-06
Authors: Li, S., Nanson, J.D., Manik, M.K., Gu, W., Landsberg, M.J., Ve, T., Kobe, B.
PDB entry 7uxv: human triosephosphate isomerase mutant G122R
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-05-06
Authors: Romero, J.M.
PDB entry 7uxw: Structure of ATP and GTP bind to Cyclic GMP AMP synthase (cGAS) through Mg coordination
Classification: Transferase/DNA
Source organism: DNA molecule; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2022-05-06
Authors: Wu, S., Gabelli, S.B., Sohn, J.
PDB entry 7uxx: Crystal structure of SARS-CoV-2 nucleocapsid protein C-terminal domain
Classification: RNA BINDING PROTEIN, Viral protein
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-05-06
Authors: Bezerra, E.H.S., Tonoli, C.C.C., Soprano, A.S., Franchini, K.G., Trivella, D.B.B., Benedetti, C.E.
PDB entry 7uxy: Isoreticular, interpenetrating co-crystal of protein variant Replication Initiator Protein REPE54 (L53G,Q54G,E55G) and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence.
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2022-05-06
Authors: Orun, A.R., Snow, C.D.
PDB entry 7uxz: Crystal structure of SARS-CoV-2 nucleocapsid protein C-terminal domain complexed with Chicoric acid
Classification: RNA BINDING PROTEIN/Viral Protein
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.733 Å
Deposited: 2022-05-06
Authors: Bezerra, E.H.S., Tonoli, C.C.C., Soprano, A.S., Franchini, K.G., Trivella, D.B.B., Benedetti, C.E.
PDB entry 7uy0: Crystal structure of human Fgr tyrosine kinase in complex with A-419259
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-05-06
Authors: Du, S., Alvarado, J.J., Smithgall, T.E.
PDB entry 7uy1: HUMAN PRMT5:MEP50 COMPLEX WITH MTA and Fragment 5 Bound
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2022-05-06
Authors: Gunn, R.J.
PDB entry 7uy2: Structure of RNF31 in complex with FP06649, a Helicon Polypeptide
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2022-05-06
Authors: Agarwal, S., Thomson, T., Wahl, S., Walkup, W., Olsen, T., Verdine, G., McGee, J.
PDB entry 7uy3: Crystal structure of human Fgr tyrosine kinase in complex with TL02-59
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2022-05-06
Authors: Du, S., Alvarado, J.J., Smithgall, T.E.
PDB entry 7uy4: Aminoglycoside-modifying enzyme ANT-3,9 in complex with spectinomycin and AMP-PNP
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2022-05-06
Authors: Reeve, S.M., Lee, R.E., Das, N., Jayaraman, S.
PDB entry 7uy5: Tetrahymena telomerase with CST
Classification: REPLICATION
Source organism: Tetrahymena thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-05-06
Authors: He, Y., Song, H., Chan, H., Wang, Y., Liu, B., Susac, L., Zhou, Z.H., Feigon, J.
PDB entry 7uy6: Tetrahymena telomerase at 2.9 Angstrom resolution
Classification: REPLICATION
Source organism: Tetrahymena thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-05-06
Authors: He, Y., Song, H., Chan, H., Wang, Y., Liu, B., Susac, L., Zhou, Z.H., Feigon, J.
PDB entry 7uy7: Tetrahymena CST with Polymerase alpha-Primase
Classification: REPLICATION
Source organism: Tetrahymena thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-05-06
Authors: He, Y., Song, H., Chan, H., Wang, Y., Liu, B., Susac, L., Zhou, Z.H., Feigon, J.
PDB entry 7uy8: Tetrahymena Polymerase alpha-Primase
Classification: REPLICATION
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-05-06
Authors: He, Y., Song, H., Chan, H., Wang, Y., Liu, B., Susac, L., Zhou, Z.H., Feigon, J.
PDB entry 7uya: Inhibitor bound VIM1
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2022-05-06
Authors: Fischmann, T.O., Scapin, G.
PDB entry 7uyb: Inhibitor bound VIM1
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2022-05-06
Authors: Fischmann, T.O., Scapin, G.
PDB entry 7uyc: Inhibitor bound VIM1
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2022-05-06
Authors: Fischmann, T.O., Scapin, G.
PDB entry 7uyd: Inhibitor bound VIM1
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2022-05-06
Authors: Fischmann, T.O., Scapin, G.
PDB entry 7uyf: Human PRMT5:MEP50 structure with Fragment 4 and MTA Bound
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2022-05-06
Authors: Gunn, R.J., Lawson, J.D., Smith, C.R.
PDB entry 7uyg: Structure of the first OTU domain from Legionella pneumophila effector protein LotA
Classification: HYDROLASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-05-06
Authors: Pruneda, J.N.
PDB entry 7uyh: Structure of the first OTU domain from Legionella pneumophila effector protein LotA bound to K6-linked diUb
Classification: HYDROLASE
Source organism: Homo sapiens; Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-05-06
Authors: Warren, G.D., Pruneda, J.N.
PDB entry 7uyi: Crystal structure of the computationally optimized broadly reactive H1 influenza hemagglutinin P1
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-05-06
Authors: Dzimianski, J.V., DuBois, R.M.
PDB entry 7uyj: Structure of RNF31 in complex with FP06652, a Helicon Polypeptide
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-05-06
Authors: Agarwal, S., Thomson, T., Wahl, S., Walkup, W., Olsen, T., Verdine, G., McGee, J.
PDB entry 7uyk: Structure of RNF31 in complex with FP06655, a Helicon Polypeptide
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-05-06
Authors: Agarwal, S., Thomson, T., Wahl, S., Walkup, W., Olsen, T., Verdine, G., McGee, J.
PDB entry 7uyl: 850 Fab
Classification: ANTIMICROBIAL PROTEIN,IMMUNE SYSTEM
Source organism: Lama glama; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-05-06
Authors: Kucharska, I., Prieto, K., Julien, J.P.
PDB entry 7uym: 850 Fab in complex with NANPNANPNANP peptide
Classification: ANTIMICROBIAL PROTEIN,IMMUNE SYSTEM
Source organism: Lama glama; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-05-06
Authors: Kucharska, I., Prieto, K., Julien, J.P.
PDB entry 7uyn: Crystal structure of B-form alien DNA 5'-CTTBPPBBSSZZSAAG in a host-guest complex with the N-terminal fragment of Moloney murine leukemia virus reverse transcriptase
Classification: DNA BINDING PROTEIN/DNA
Source organism: Moloney murine leukemia virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-05-06
Authors: Georgiadis, M.M.
PDB entry 7uyo: Crystal structure of B-form alien DNA 5'-CTTSSPBZPSZBBAAG in a host-guest complex with the N-terminal fragment of Moloney murine leukemia virus reverse transcriptase
Classification: DNA BINDING PROTEIN/DNA
Source organism: Moloney murine leukemia virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-05-06
Authors: Georgiadis, M.M.
PDB entry 7uyp: Crystal structure of B-form alien DNA 5'-CTTZZPBSBSZPPAAG in a host-guest complex with the N-terminal fragment of Moloney murine leukemia virus reverse transcriptase
Classification: DNA BINDING PROTEIN/DNA
Source organism: Moloney murine leukemia virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-05-06
Authors: Georgiadis, M.M.
PDB entry 7uyq: Structure of GTP binds to Cyclic GMP AMP synthase (cGAS) through Mg coordination
Classification: Transferase/DNA
Source organism: DNA molecule; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2022-05-07
Authors: Wu, S., Gabelli, S.B., Sohn, J.
PDB entry 7uyr: Crystal structure of TYK2 kinase domain in complex with compound 12
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-05-07
Authors: Toms, A.V., Leit, S., Greenwood, J.R., Mondal, S., Carriero, S., Dahlgren, M., Harriman, G.C., Kennedy-Smith, J.J., Kapeller, R., Lawson, J.P., Romero, D.L., Shelley, M., Wester, R.T., Westlin, W., Mc Elwee, J.J., Miao, W., Edmondson, S.D., Massee, C.E.
PDB entry 7uys: Crystal structure of TYK2 kinase domain in complex with compound 16
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-05-07
Authors: Toms, A.V., Leit, S., Greenwood, J.R., Mondal, S., Carriero, S., Dahlgren, M., Harriman, G.C., Kennedy-Smith, J.J., Kapeller, R., Lawson, J.P., Romero, D.L., Shelley, M., Wester, R.T., Westlin, W., Mc Elwee, J.J., Miao, W., Edmondson, S.D., Massee, C.E.
PDB entry 7uyt: Crystal structure of TYK2 kinase domain in complex with compound 25
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-05-07
Authors: Toms, A.V., Leit, S., Greenwood, J.R., Mondal, S., Carriero, S., Dahlgren, M., Harriman, G.C., Kennedy-Smith, J.J., Kapeller, R., Lawson, J.P., Romero, D.L., Shelley, M., Wester, R.T., Westlin, W., Mc Elwee, J.J., Miao, W., Edmondson, S.D., Massee, C.E.
PDB entry 7uyu: Crystal structure of TYK2 kinase domain in complex with compound 30
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-05-07
Authors: Toms, A.V., Leit, S., Greenwood, J.R., Mondal, S., Carriero, S., Dahlgren, M., Harriman, G.C., Kennedy-Smith, J.J., Kapeller, R., Lawson, J.P., Romero, D.L., Shelley, M., Wester, R.T., Westlin, W., Mc Elwee, J.J., Miao, W., Edmondson, S.D., Massee, C.E.
PDB entry 7uyv: Crystal structure of JAK3 kinase domain in complex with compound 25
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-05-07
Authors: Toms, A.V., Leit, S., Greenwood, J.R., Mondal, S., Carriero, S., Dahlgren, M., Harriman, G.C., Kennedy-Smith, J.J., Kapeller, R., Lawson, J.P., Romero, D.L., Shelley, M., Wester, R.T., Westlin, W., Mc Elwee, J.J., Miao, W., Edmondson, S.D., Massee, C.E.
PDB entry 7uyw: Crystal structure of JAK2 kinase domain in complex with compound 30
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2022-05-07
Authors: Toms, A.V., Leit, S., Greenwood, J.R., Mondal, S., Carriero, S., Dahlgren, M., Harriman, G.C., Kennedy-Smith, J.J., Kapeller, R., Lawson, J.P., Romero, D.L., Shelley, M., Wester, R.T., Westlin, W., Mc Elwee, J.J., Miao, W., Edmondson, S.D., Massee, C.E.
PDB entry 7uyx: Structure of bacteriophage PA1c gp2
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PA1C
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2022-05-07
Authors: Enustun, E., Deep, A., Gu, Y., Nguyen, K., Chaikeeratisak, V., Armbruster, E., Ghassemian, M., Pogliano, J., Corbett, K.D.
PDB entry 7uyy: The crystal structure of the Pseudomonas aeruginosa aldehyde dehydrogenase encoded by the PA4189 gene in complex with NADH
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-05-07
Authors: Gonzalez-Segura, L., Juarez-Vazquez, A.L., Munoz-Clares, R.A.
PDB entry 7uyz: Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG
Classification: Transferase/DNA
Source organism: DNA molecule; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2022-05-07
Authors: Wu, S., Gabelli, S.B., Sohn, J.
PDB entry 7uz0: AntiT-tRNA flip UCCA
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2022-05-07
Authors: Price, I.R., Grigg, J.C., Ke, A.
PDB entry 7uz1: Structure of beta-glycosidase from Sulfolobus solfataricus in complex with C5a-bromo-valienide.
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-05-08
Authors: Danby, P.M., Jeong, A., Sim, L., Sweeney, R.P., Wardman, J.F., Karimi, R., Geissner, A., Worrall, L.J., Strynadka, N.C.J., Withers, S.G.
PDB entry 7uz2: Structure of beta-glycosidase from Sulfolobus solfataricus in complex with C5a-fluoro-valienide.
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-05-08
Authors: Danby, P.M., Jeong, A., Sim, L., Sweeney, R.P., Wardman, J.F., Geissner, A., Worrall, L.J., Strynadka, N.C.J., Withers, S.G.
PDB entry 7uz3: Band 3-Glycophorin A complex, outward facing
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2022-05-08
Authors: Vallese, F., Kim, K., Yen, L.Y., Johnston, J.D., Noble, A.J., Cali, T., Clarke, O.B.
PDB entry 7uz4: Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-3
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uz5: Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-6
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uz6: Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-28
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uz7: Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-31
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uz8: Structure of the SARS-CoV-2 Omicron BA.1 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-31
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uz9: Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, M8a-34
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uza: Structure of the SARS-CoV-2 S 6P trimer in complex with the mouse antibody Fab fragment, HSW-1
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uzb: Structure of the SARS-CoV-2 S S1 doamin in complex with the mouse antibody Fab fragment, HSW-2
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uzc: Structure of the SARS-CoV-2 RBD in complex with the mouse antibody Fab fragment, M8a-34
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uzd: Structure of the SARS-CoV-2 RBD in complex with the mouse antibody Fab fragment, HSW-2
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-05-08
Authors: Fan, C., Bjorkman, P.J.
PDB entry 7uze: Erythrocyte ankyrin-1 complex class 2 local refinement of AQP1 (C4 symmetry applied)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2022-05-09
Authors: Vallese, F., Kim, K., Yen, L.Y., Johnston, J.D., Noble, A.J., Cali, T., Clarke, O.B.
PDB entry 7uzf: Rat Kidney V-ATPase with SidK, State 1
Classification: PROTON TRANSPORT
Source organism: Legionella pneumophila; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-05-09
Authors: Rubinstein, J.L., Abbas, Y.M.
PDB entry 7uzg: Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 1
Classification: PROTON TRANSPORT
Source organism: Legionella pneumophila; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-05-09
Authors: Rubinstein, J.L., Abbas, Y.M.
PDB entry 7uzh: Rat Kidney V-ATPase with SidK, State 2
Classification: PROTON TRANSPORT
Source organism: Legionella pneumophila; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-05-09
Authors: Rubinstein, J.L., Abbas, Y.M.
PDB entry 7uzi: Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 2
Classification: PROTON TRANSPORT
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-05-09
Authors: Rubinstein, J.L., Abbas, Y.M.
PDB entry 7uzj: Rat Kidney V1 complex with SidK and NCOA7B, State 1
Classification: PROTON TRANSPORT
Source organism: Legionella pneumophila; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-05-09
Authors: Abbas, Y.M., Rubinstein, J.L.
PDB entry 7uzk: Rat Kidney V1 complex lacking subunit H with SidK and NCOA7B, State 1
Classification: PROTON TRANSPORT
Source organism: Legionella pneumophila; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-05-09
Authors: Abbas, Y.M., Rubinstein, J.L.
PDB entry 7uzl: Solution NMR structure of 9-residue Rosetta-designed cyclic peptide D9.16 in CDCl3 with cis/trans switching (B-TC conformation)
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-05-09
Authors: Ramelot, T.A., Tejero, R., Montelione, G.T.
PDB entry 7uzm: Glutamate dehydrogenase 1 from human liver
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2022-05-09
Authors: Zhang, Z.
PDB entry 7uzn: CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH BMT-206059 AKA 2-{(3M)-3-(1,4-DIMETHYL-1H-1,2,3-TRIAZOL-5-YL)-8-FLUORO-5-[(S)-(OXAN-4-YL)(PHENYL)METHYL]-5H-PYRIDO[3,2-b]INDOL-7-YL}PROPAN-2-OL, TRIPLY DEUTERATED ON THE 4-METHYL GROUP
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.685 Å
Deposited: 2022-05-09
Authors: Sheriff, S.
PDB entry 7uzo: Parathyroid hormone 1 receptor extracellular domain complexed with a peptide ligand containing one beta-amino acid
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-05-09
Authors: Yu, Z., Bruchs, A.T., Bingman, C.A., Gellman, S.H.
PDB entry 7uzp: parathyroid hormone 1 receptor extracellular domain complexed with a peptide ligand containing three beta-amino acids
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-05-09
Authors: Yu, Z., Bruchs, A.T., Bingman, C.A., Gellman, S.H.
PDB entry 7uzq: Local refinement of RhAG-RhCE-ANK1(AR1-5), from consensus refinement of all classes
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.17 Å
Deposited: 2022-05-09
Authors: Vallese, F., Kim, K., Yen, L.Y., Johnston, J.D., Noble, A.J., Cali, T., Clarke, O.B.
PDB entry 7uzr: Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG
Classification: TRANSFERASE/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-05-09
Authors: Wu, S., Gabelli, S.B., Sohn, J.
PDB entry 7uzs: Protein 4.2 (local refinement from consensus reconstruction of ankyrin complex classes)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2022-05-09
Authors: Vallese, F., Kim, K., Yen, L.Y., Johnston, J.D., Noble, A.J., Cali, T., Clarke, O.B.
PDB entry 7uzt: Crystal structure of the human astrovirus MLB1 capsid protein spike domain at 1.86-A resolution
Classification: VIRAL PROTEIN
Source organism: Astrovirus MLB1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2022-05-09
Authors: Delgado-Cunningham, K., DuBois, R.
PDB entry 7uzu: Ankyrin-1 (N-terminal region of membrane binding domain, local refinement from consensus reconstruction; bound to N-terminal peptide from band 3)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-05-09
Authors: Vallese, F., Kim, K., Yen, L.Y., Johnston, J.D., Noble, A.J., Cali, T., Clarke, O.B.
PDB entry 7uzv: Cytoplasmic domains of Band 3-I (local refinement from consensus reconstruction of ankyrin complexes)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-05-09
Authors: Vallese, F., Kim, K., Yen, L.Y., Johnston, J.D., Noble, A.J., Cali, T., Clarke, O.B.
PDB entry 7uzw: Staphylococcus epidermidis RP62a CRISPR effector subcomplex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Staphylococcus epidermidis RP62A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2022-05-09
Authors: Smith, E.M., Ferrell, S.H., Tokars, V.L., Mondragon, A.
PDB entry 7uzx: Staphylococcus epidermidis RP62a CRISPR effector subcomplex with non-self target RNA bound
Classification: HYDROLASE/RNA
Source organism: Staphylococcus epidermidis RP62A; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2022-05-09
Authors: Smith, E.M., Ferrell, S.H., Tokars, V.L., Mondragon, A.
PDB entry 7uzy: Staphylococcus epidermidis RP62A CRISPR effector complex with non-self target RNA 2
Classification: HYDROLASE/RNA
Source organism: Staphylococcus epidermidis RP62A; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.05 Å
Deposited: 2022-05-09
Authors: Smith, E.M., Ferrell, S.H., Tokars, V.L., Mondragon, A.
PDB entry 7uzz: Staphylococcus epidermidis RP62a CRISPR tall effector complex
Classification: HYDROLASE/RNA
Source organism: Staphylococcus epidermidis RP62A
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.45 Å
Deposited: 2022-05-09
Authors: Smith, E.M., Ferrell, S.H., Tokars, V.L., Mondragon, A.
PDB entry 7v00: Staphylococcus epidermidis RP62a CRISPR tall effector complex with bound ATP
Classification: HYDROLASE/RNA
Source organism: Staphylococcus epidermidis RP62A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2022-05-09
Authors: Smith, E.M., Ferrell, S.H., Tokars, V.L., Mondragon, A.
PDB entry 7v01: Staphylococcus epidermidis RP62a CRISPR short effector complex with self RNA target and ATP
Classification: HYDROLASE/RNA
Source organism: Staphylococcus epidermidis RP62A; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2022-05-09
Authors: Smith, E.M., Ferrell, S.H., Tokars, V.L., Mondragon, A.
PDB entry 7v02: Staphylococcus epidermidis RP62A CRISPR short effector complex
Classification: HYDROLASE/RNA
Source organism: Staphylococcus epidermidis RP62A
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.97 Å
Deposited: 2022-05-09
Authors: Smith, E.M., Ferrell, S.H., Tokars, V.L., Mondragon, A.
PDB entry 7v03: Crystal structure of cytoplasmic triosephosphate isomerase from Cuscuta australis
Classification: ISOMERASE
Source organism: Cuscuta australis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-05-09
Authors: Jones, G., Vickers, C., Patrick, W., Jameson, G.