LiteFold/PDB huggingface dataset:
PDB entry 6dff: Structure of the cargo bound AP-1:Arf1:tetherin-Nef monomer
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2018-05-14
Authors: Morris, K.L., Buffalo, C.Z., Ren, X., Hurley, J.H.
PDB entry 6dfg: BG505 MD39 SOSIP trimer in complex with mature BG18 fragment antigen binding
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.42 Å
Deposited: 2018-05-14
Authors: Ozorowski, G., Steichen, J.M., Schief, W.R., Ward, A.B.
PDB entry 6dfh: BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2018-05-14
Authors: Ozorowski, G., Steichen, J.M., Schief, W.R., Ward, A.B.
PDB entry 6dfi: Crystal structure of anti-Zika antibody Z021 bound to Zika virus envelope protein DIII
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Zika virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2018-05-14
Authors: Keeffe, J.R., Bjorkman, P.J.
PDB entry 6dfj: Crystal structure of anti-Zika antibody Z021 bound to DENV-1 envelope protein DIII
Classification: IMMUNE SYSTEM
Source organism: Dengue virus 1; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2018-05-14
Authors: Keeffe, J.R., Bjorkman, P.J.
PDB entry 6dfk: Crystal structure of the 11S subunit of the Plasmodium falciparum proteasome, PA28
Classification: PROTEIN BINDING
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-05-15
Authors: Xie, S.C., Metcalfe, R.D., Gillett, D.L., Tilley, L., Griffin, M.D.W.
PDB entry 6dfl: WaaP in complex with acyl carrier protein
Classification: HYDROLASE
Source organism: Escherichia coli; Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.396 Å
Deposited: 2018-05-15
Authors: Chopra, R., Vash, B.
PDB entry 6dfm: Crystal structure of human GRP78 in complex with 8-aminoadenosine
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2018-05-15
Authors: Ferrie, R.P., Chen, Y., Antoshchenko, T., Cooney, O.M., Huang, Y., Park, H.W.
PDB entry 6dfn: Crystal structure of estrogen receptor alpha in complex with receptor degrader 16aa
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2018-05-15
Authors: Kiefer, J.R., Vinogradova, M., Liang, J., Zhang, B., Ortwine, D.F., Nettles, K.W., Nwachukwu, J.C.
PDB entry 6dfo: Crystal structure of human GRP78 in complex with 8-bromoadenosine
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2018-05-15
Authors: Ferrie, R.P., Chen, Y., Antoshchenko, T., Cooney, O.M., Huang, Y., Park, H.W.
PDB entry 6dfp: Crystal Structure of a Tripartite Toxin Component VCA0883 from Vibrio cholerae
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2018-05-15
Authors: Kim, Y., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6dfq: mouse diabetogenic TCR I.29
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-05-15
Authors: Wang, Y., Dai, S.
PDB entry 6dfr: CRYSTAL STRUCTURES OF ESCHERICHIA COLI DIHYDROFOLATE REDUCTASE. THE NADP+ HOLOENZYME AND THE FOLATE(DOT)NADP+ TERNARY COMPLEX. SUBSTRATE BINDING AND A MODEL FOR THE TRANSITION STATE
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 1988-10-21
Authors: Bystroff, C., Oatley, S.J., Kraut, J.
PDB entry 6dfs: mouse TCR I.29 in complex with IAg7-p8E9E6ss
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-05-15
Authors: Wang, Y., Dai, S.
PDB entry 6dft: Trypanosoma brucei deoxyhypusine synthase
Classification: TRANSFERASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-05-15
Authors: Tomchick, D.R., Phillips, M.A., Afanador, G.A.
PDB entry 6dfu: Tryptophan--tRNA ligase from Haemophilus influenzae.
Classification: LIGASE
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-05-15
Authors: Osipiuk, J., Maltseva, N., Mulligan, R., Grimshaw, S., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6dfv: Mouse diabetogenic TCR 8F10
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2018-05-15
Authors: Wang, Y., Dai, S.
PDB entry 6dfw: TCR 8F10 in complex with IAg7-p8G9E
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-05-15
Authors: Wang, Y., Dai, S.
PDB entry 6dfx: human diabetogenic TCR T1D3 in complex with DQ8-p8E9E peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2018-05-15
Authors: Wang, Y., Dai, S.
PDB entry 6dfy: Remodeled crystal structure of DNA-bound DUX4-HD2
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.623 Å
Deposited: 2018-05-15
Authors: Aihara, H., Shi, K.
PDB entry 6dg0: MEC-8 C-terminal RRM domain bound to AGCACA
Classification: RNA BINDING PROTEIN/DNA
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.457 Å
Deposited: 2018-05-16
Authors: Mackereth, C.D., Soufari, H.
PDB entry 6dg1: NMR structure of the second qRRM2 domain of human hnRNP H
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2018-05-16
Authors: Srinivasa, R.P.
PDB entry 6dg2: Antigen Binding Fragment of the Pan-ebolavirus Monoclonal Antibody 6D6
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2018-05-16
Authors: Milligan, J.C., Saphire, E.O.
PDB entry 6dg3: LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, in complex with caesium
Classification: TRANSFERASE
Source organism: Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.944 Å
Deposited: 2018-05-16
Authors: Fellner, M., Hausinger, R.P., Hu, J.
PDB entry 6dg4: Structure of the Chaetomium thermophilum Ulp1-like SUMO protease catalytic domain
Classification: HYDROLASE
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.442 Å
Deposited: 2018-05-16
Authors: Lima, C.D., Baytshtok, V.
PDB entry 6dg5: Structure of a de novo designed Interleukin-2/Interleukin-15 mimetic complex with IL-2Rb and IL-2Rg
Classification: BIOSYNTHETIC PROTEIN/Protein Binding
Source organism: Mus musculus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.516 Å
Deposited: 2018-05-16
Authors: Jude, K.M., Silva, D.-A., Yu, S., Baker, D., Garcia, K.C.
PDB entry 6dg6: Structure of a de novo designed Interleukin-2/Interleukin-15 mimetic
Classification: BIOSYNTHETIC PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.999 Å
Deposited: 2018-05-16
Authors: Jude, K.M., Silva, D.-A., Yu, S., Baker, D., Garcia, K.C.
PDB entry 6dg7: Full-length 5-HT3A receptor in a serotonin-bound conformation- State 1
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2018-05-17
Authors: Basak, S., Chakrapani, S.
PDB entry 6dg8: Full-length 5-HT3A receptor in a serotonin-bound conformation- State 2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2018-05-17
Authors: Basak, S., Chakrapani, S.
PDB entry 6dga: Cronobacter turicensis RpfR quorum-sensing receptor RpfF interaction domain
Classification: UNKNOWN FUNCTION
Source organism: Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2018-05-17
Authors: Waldron, E.J., Neiditch, M.B.
PDB entry 6dgb: Crystal structure of the C-terminal catalytic domain of IS1535 TnpA, an IS607-like serine recombinase
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2018-05-17
Authors: Chen, W.Y., Hancock, S.P., Cascio, D., Johnson, R.C.
PDB entry 6dgc: Crystal structure of the C-terminal catalytic domain of ISC1926 TnpA, an IS607-like serine recombinase
Classification: HYDROLASE
Source organism: Sulfolobus sp. L00 11
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2018-05-17
Authors: Hancock, S.P., Kumar, P., Cascio, D., Johnson, R.C.
PDB entry 6dgd: PriA helicase bound to dsDNA of a DNA replication fork
Classification: DNA BINDING PROTEIN/DNA
Source organism: Klebsiella pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.823 Å
Deposited: 2018-05-17
Authors: Satyshur, K.A., Windgassen, T.A., Keck, J.L.
PDB entry 6dge: Crystal structure of the dimethylarginine dimethylaminohydrolase adduct with N5-(1-imino-2-chloroethyl)-L-lysine
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2018-05-17
Authors: Monzingo, A.F., Burstein-Teitelbaum, G., Er, J.A.V., Tuley, A., Fast, W.
PDB entry 6dgf: Ubiquitin Variant bound to USP2
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2018-05-17
Authors: Manczyk, N., Sicheri, F.
PDB entry 6dgg: Cronobacter turicensis RpfR quorum-sensing receptor PAS domain in complex with C12:0
Classification: UNKNOWN FUNCTION
Source organism: Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.498 Å
Deposited: 2018-05-17
Authors: Waldron, E.J., Neiditch, M.B.
PDB entry 6dgi: The crystal structure of D-alanyl-alanine synthetase A from Vibrio cholerae O1 biovar eltor str. N16961
Classification: LIGASE
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-05-17
Authors: Tan, K., Zhou, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6dgj: Cronobacter turicensis RpfR quorum-sensing receptor PAS domain in complex with BDSF
Classification: UNKNOWN FUNCTION
Source organism: Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.294 Å
Deposited: 2018-05-17
Authors: Waldron, E.J., Neiditch, M.B.
PDB entry 6dgk: Crystal Structure of the Non-Structural Protein 1 (NS1) effector domain W187A mutant from the A/Brevig Mission/1/1918 (H1N1) strain of Influenza A Virus
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-05-17
Authors: Kleinpeter, A.B., Green, T.J., Petit, C.M.
PDB entry 6dgl: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Darglitazone
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2018-05-17
Authors: Shang, J., Kojetin, D.J.
PDB entry 6dgm: Streptococcus pyogenes phosphoglycerol transferase GacH in complex with sn-glycerol-1-phosphate
Classification: TRANSFERASE
Source organism: Streptococcus pyogenes MGAS5005
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2018-05-17
Authors: Edgar, R.J., Korotkova, N., Korotkov, K.V.
PDB entry 6dgn: Cronobacter turicensis BDSF synthase RpfF in complex with the RpfR quorum-sensing receptor FI domain
Classification: UNKNOWN FUNCTION
Source organism: Burkholderia cenocepacia PC184; Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.999 Å
Deposited: 2018-05-17
Authors: Waldron, E.J., Neiditch, M.B.
PDB entry 6dgo: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Troglitazone
Classification: transcription/transcription inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-05-17
Authors: Shang, J., Kojetin, D.J.
PDB entry 6dgp: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with TRAP220 Coactivator Peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-05-17
Authors: Shang, J., Kojetin, D.J.
PDB entry 6dgq: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with CAY10506
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2018-05-17
Authors: Shang, J., Kojetin, D.J.
PDB entry 6dgr: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with CAY10638
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2018-05-18
Authors: Shang, J., Kojetin, D.J.
PDB entry 6dgs: Crystal Structure of Leishmania major dihydroorotate dehydrogenase mutant Y142A
Classification: OXIDOREDUCTASE
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-05-18
Authors: Reis, R.A.G., Pinheiro, M.P., Nonato, M.C.
PDB entry 6dgt: Selective PI3K beta inhibitor bound to PI3K delta
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2018-05-18
Authors: Somoza, J., Villasenor, A., McGrath, M.
PDB entry 6dgu: PER-2 class A extended-spectrum beta-lactamase crystal structure at 2.69 Angstrom resolution
Classification: HYDROLASE
Source organism: Citrobacter freundii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.691 Å
Deposited: 2018-05-18
Authors: Power, P., Ruggiero, M., Gutkind, G., Bonomo, R., Klinke, S.
PDB entry 6dgv: iGABASnFR Fluorescent GABA Sensor precursor
Classification: FLUORESCENT PROTEIN
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-05-18
Authors: Marvin, J.S., Looger, L.L.
PDB entry 6dgx: Crystal structure of HIV-1 Protease NL4-3 WT in complex with darunavir
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dgy: Crystal structure of HIV-1 Protease NL4-3 WT in complex with UMass1
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.954 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dgz: Crystal structure of HIV-1 Protease NL4-3 WT in complex with UMass6
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.994 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh0: Crystal structure of HIV-1 Protease NL4-3 I84V Mutant in complex with darunavir
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.899 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh1: Crystal structure of HIV-1 Protease NL4-3 I84V Mutant in complex with UMass1
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.971 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh2: Crystal structure of HIV-1 Protease NL4-3 I84V Mutant in complex with UMass6
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.978 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh3: Crystal structure of HIV-1 Protease NL4-3 V82I Mutant in complex with darunavir
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.908 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh4: Crystal structure of HIV-1 Protease NL4-3 V82I Mutant in complex with UMass1
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.943 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh5: Crystal structure of HIV-1 Protease NL4-3 V82I Mutant in complex with UMass6
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.008 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh6: Crystal structure of HIV-1 Protease NL4-3 I50V Mutant in complex with darunavir
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh7: Crystal structure of HIV-1 Protease NL4-3 I50V Mutant in complex with UMass1
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.997 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh8: Crystal structure of HIV-1 Protease NL4-3 I50V Mutant in complex with UMass6
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.951 Å
Deposited: 2018-05-18
Authors: Lockbaum, G.J., Schiffer, C.A.
PDB entry 6dh9: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with MSDC-0602
Classification: transcription/transcription inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2018-05-18
Authors: Shang, J., Kojetin, D.J.
PDB entry 6dha: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with Hydroxy Pioglitazone (M-IV)
Classification: transcription/transcription inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2018-05-18
Authors: Shang, J., Mosure, S.A., Kojetin, D.J.
PDB entry 6dhb: Crystal structure of the human TIM-3 with bound Calcium
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2018-05-19
Authors: Gandhi, A.K., Kim, W.M., Huang, Y.H., Bonsor, D., Sundberg, E., Sun, Z.-Y., Petsko, G.A., Kuchroo, V., Blumberg, R.S.
PDB entry 6dhc: X-ray structure of BACE1 in complex with a bicyclic isoxazoline carboxamide as the P3 ligand
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2018-05-19
Authors: Mesecar, A.D., Lendy, E.K.
PDB entry 6dhd: Bovine glutamate dehydrogenase complexed with NADH, GTP, glutamate
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-05-19
Authors: Smith, T.J.
PDB entry 6dhe: RT XFEL structure of the dark-stable state of Photosystem II (0F, S1-rich) at 2.05 Angstrom resolution
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus; Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-05-20
Authors: Kern, J., Chatterjee, R., Young, I.D., Fuller, F.D., Lassalle, L., Ibrahim, M., Gul, S., Fransson, T., Brewster, A.S., Alonso-Mori, R., Hussein, R., Zhang, M., Douthit, L., de Lichtenberg, C., Cheah, M.H., Shevela, D., Wersig, J., Seufert, I., Sokaras, D., Pastor, E., Weninger, C., Kroll, T., Sierra, R.G., Aller, P., Butryn, A., Orville, A.M., Liang, M., Batyuk, A., Koglin, J.E., Carbajo, S., Boutet, S., Moriarty, N.W., Holton, J.M., Dobbek, H., Adams, P.D., Bergmann, U., Sauter, N.K., Zouni, A., Messinger, J., Yano, J., Yachandra, V.K.
PDB entry 6dhf: RT XFEL structure of the one-flash state of Photosystem II (1F, S2-rich) at 2.08 Angstrom resolution
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus; Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2018-05-20
Authors: Kern, J., Chatterjee, R., Young, I.D., Fuller, F.D., Lassalle, L., Ibrahim, M., Gul, S., Fransson, T., Brewster, A.S., Alonso-Mori, R., Hussein, R., Zhang, M., Douthit, L., de Lichtenberg, C., Cheah, M.H., Shevela, D., Wersig, J., Seufert, I., Sokaras, D., Pastor, E., Weninger, C., Kroll, T., Sierra, R.G., Aller, P., Butryn, A., Orville, A.M., Liang, M., Batyuk, A., Koglin, J.E., Carbajo, S., Boutet, S., Moriarty, N.W., Holton, J.M., Dobbek, H., Adams, P.D., Bergmann, U., Sauter, N.K., Zouni, A., Messinger, J., Yano, J., Yachandra, V.K.
PDB entry 6dhg: RT XFEL structure of Photosystem II 150 microseconds after the second illumination at 2.5 Angstrom resolution
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus; Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2018-05-20
Authors: Kern, J., Chatterjee, R., Young, I.D., Fuller, F.D., Lassalle, L., Ibrahim, M., Gul, S., Fransson, T., Brewster, A.S., Alonso-Mori, R., Hussein, R., Zhang, M., Douthit, L., de Lichtenberg, C., Cheah, M.H., Shevela, D., Wersig, J., Seufert, I., Sokaras, D., Pastor, E., Weninger, C., Kroll, T., Sierra, R.G., Aller, P., Butryn, A., Orville, A.M., Liang, M., Batyuk, A., Koglin, J.E., Carbajo, S., Boutet, S., Moriarty, N.W., Holton, J.M., Dobbek, H., Adams, P.D., Bergmann, U., Sauter, N.K., Zouni, A., Messinger, J., Yano, J., Yachandra, V.K.
PDB entry 6dhh: RT XFEL structure of Photosystem II 400 microseconds after the second illumination at 2.2 Angstrom resolution
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus; Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2018-05-20
Authors: Kern, J., Chatterjee, R., Young, I.D., Fuller, F.D., Lassalle, L., Ibrahim, M., Gul, S., Fransson, T., Brewster, A.S., Alonso-Mori, R., Hussein, R., Zhang, M., Douthit, L., de Lichtenberg, C., Cheah, M.H., Shevela, D., Wersig, J., Seufert, I., Sokaras, D., Pastor, E., Weninger, C., Kroll, T., Sierra, R.G., Aller, P., Butryn, A., Orville, A.M., Liang, M., Batyuk, A., Koglin, J.E., Carbajo, S., Boutet, S., Moriarty, N.W., Holton, J.M., Dobbek, H., Adams, P.D., Bergmann, U., Sauter, N.K., Zouni, A., Messinger, J., Yano, J., Yachandra, V.K.
PDB entry 6dhi: Butelase 1: Auto-Catalytic Cleavage as an Evolutionary Constraint for Macrocyclizing Endopeptidases
Classification: PLANT PROTEIN, Hydrolase
Source organism: Clitoria ternatea
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-05-20
Authors: Bond, C.S., Haywood, J.
PDB entry 6dhj: Crystal structures of cyanuric acid hydrolase from Moorella thermoacetica
Classification: HYDROLASE
Source organism: Moorella thermoacetica ATCC 39073
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-05-20
Authors: Shi, K., Aihara, H.
PDB entry 6dhk: Bovine glutamate dehydrogenase complexed with ADP
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-05-20
Authors: Smith, T.J.
PDB entry 6dhl: Bovine glutamate dehydrogenase complexed with epicatechin-3-gallate (ECG)
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.624 Å
Deposited: 2018-05-20
Authors: Smith, T.J.
PDB entry 6dhm: Bovine glutamate dehydrogenase complexed with zinc
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2018-05-20
Authors: Smith, T.J.
PDB entry 6dhn: Bovine glutamate dehydrogenase complexed with Eu3+
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2018-05-20
Authors: Smith, T.J.
PDB entry 6dho: RT XFEL structure of the two-flash state of Photosystem II (2F, S3-rich) at 2.07 Angstrom resolution
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus; Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2018-05-20
Authors: Kern, J., Chatterjee, R., Young, I.D., Fuller, F.D., Lassalle, L., Ibrahim, M., Gul, S., Fransson, T., Brewster, A.S., Alonso-Mori, R., Hussein, R., Zhang, M., Douthit, L., de Lichtenberg, C., Cheah, M.H., Shevela, D., Wersig, J., Seufert, I., Sokaras, D., Pastor, E., Weninger, C., Kroll, T., Sierra, R.G., Aller, P., Butryn, A., Orville, A.M., Liang, M., Batyuk, A., Koglin, J.E., Carbajo, S., Boutet, S., Moriarty, N.W., Holton, J.M., Dobbek, H., Adams, P.D., Bergmann, U., Sauter, N.K., Zouni, A., Messinger, J., Yano, J., Yachandra, V.K.
PDB entry 6dhp: RT XFEL structure of the three-flash state of Photosystem II (3F, S0-rich) at 2.04 Angstrom resolution
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus; Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2018-05-20
Authors: Kern, J., Chatterjee, R., Young, I.D., Fuller, F.D., Lassalle, L., Ibrahim, M., Gul, S., Fransson, T., Brewster, A.S., Alonso-Mori, R., Hussein, R., Zhang, M., Douthit, L., de Lichtenberg, C., Cheah, M.H., Shevela, D., Wersig, J., Seufert, I., Sokaras, D., Pastor, E., Weninger, C., Kroll, T., Sierra, R.G., Aller, P., Butryn, A., Orville, A.M., Liang, M., Batyuk, A., Koglin, J.E., Carbajo, S., Boutet, S., Moriarty, N.W., Holton, J.M., Dobbek, H., Adams, P.D., Bergmann, U., Sauter, N.K., Zouni, A., Messinger, J., Yano, J., Yachandra, V.K.
PDB entry 6dhq: Bovine glutamate dehydrogenase complexed with NADPH, glutamate, and GTP
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-05-20
Authors: Smith, T.J.
PDB entry 6dhr: NMR Solution structure of Rivi3
Classification: PLANT PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2018-05-21
Authors: Harvey, P.J., Craik, D.J.
PDB entry 6dhs: Structure of hnRNP H qRRM1,2
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2018-05-21
Authors: Meagher, J.L., Stuckey, J.A.
PDB entry 6dht: Bacteroides ovatus GH9 Bacova_02649
Classification: HYDROLASE
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2018-05-21
Authors: Koropatkin, N.M., Foley, M.H.
PDB entry 6dhu: Crystal structure of Tdp1 catalytic domain in complex with Zenobia fragment ZT0911 from cocktail soak
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2018-05-21
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6dhv: Structure of Arabidopsis Fatty Acid Amide Hydrolase
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.099 Å
Deposited: 2018-05-21
Authors: Aziz, M., Wang, X., Tripathi, A., Bankaitis, V., Chapman, K.D.
PDB entry 6dhw: Crystal structure of primase iron-sulfur domain (266-457)
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.013 Å
Deposited: 2018-05-21
Authors: Holt, M.E., Salay, L.E., Chazin, W.J.
PDB entry 6dhx: Structure of TipC2 from Streptococcus intermedius B196
Classification: ANTITOXIN
Source organism: Streptococcus intermedius B196
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-05-21
Authors: Bryant, D., Klein, T.A., Whitney, J.C.
PDB entry 6dhy: Crystallogrpahic tetramer of Zn-bound RIDC1 variant bearing two disulfide bonded cysteines
Classification: ELECTRON TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2018-05-21
Authors: Tezcan, F.A., Churchfield, L.A.
PDB entry 6dhz: Crystallographic octamer of a metal-free RIDC1 variant bearing two disulfide bonded cysteines
Classification: ELECTRON TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2018-05-21
Authors: Tezcan, F.A., Churchfield, L.A.
PDB entry 6di0: CRYSTAL STRUCTURE OF BTK IN COMPLEX WITH FRAGMENT LIGAND
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2018-05-22
Authors: MOCHALKIN, I.
PDB entry 6di1: CRYSTAL STRUCTURE OF BTK IN COMPLEX WITH COVALENT FRAGMENT LIGAND
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2018-05-22
Authors: Jiang, X.
PDB entry 6di2: Crystal structure of eukaryotic DNA primase large subunit iron-sulfur cluster domain Y397L mutant
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae (strain JAY291)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2018-05-22
Authors: Salay, L.E., Chazin, W.J.
PDB entry 6di3: CRYSTAL STRUCTURE OF BTK IN COMPLEX WITH FRAGMENT LIGAND
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-05-22
Authors: GARDBERG, A.
PDB entry 6di4: Rational Modification of Vanillin Derivatives to Stereospecifically Destabilize Sickle Hemoglobin Polymer Formation
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-05-22
Authors: Pagare, P.P., Musayev, F.N.
PDB entry 6di5: CRYSTAL STRUCTURE OF BTK IN COMPLEX WITH COVALENT INHIBITOR
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2018-05-22
Authors: Gardberg, A.
PDB entry 6di6: Crystal structure of eukaryotic DNA primase large subunit iron-sulfur cluster domain
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae JAY291
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2018-05-22
Authors: Salay, L.E., Chazin, W.J.
PDB entry 6di7: Vps1 GTPase-BSE fusion complexed with GDP
Classification: HYDROLASE
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2018-05-22
Authors: Varlakhanova, N.V., Brady, T.M., Ford, M.G.J.
PDB entry 6di8: Crystal structure of bovine alpha-chymotrypsin in space group P65
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.859 Å
Deposited: 2018-05-23
Authors: Marshall, A.C., Keiller, B.G., Bruning, J.B.
PDB entry 6di9: CRYSTAL STRUCTURE OF BTK IN COMPLEX WITH COVALENT INHIBITOR
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2018-05-23
Authors: GARDBERG, A.
PDB entry 6dia: DNA polymerase beta substrate complex with templating cytosine and incoming Fapy-dGTP analog
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.969 Å
Deposited: 2018-05-23
Authors: Freudenthal, B.D., Smith, M.R., Wilson, S.H., Beard, W.A.
PDB entry 6dic: D276G DNA polymerase beta substrate complex with templating cytosine and incoming Fapy-dGTP analog
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.992 Å
Deposited: 2018-05-23
Authors: Freudenthal, B.D., Smith, M.R., Wilson, S.H., Beard, W.A.
PDB entry 6did: HIV Env BG505 SOSIP with polyclonal Fabs from immunized rabbit #3417 post-boost#1
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.71 Å
Deposited: 2018-05-23
Authors: Turner, H.L., Cottrell, C.A., Oyen, D., Wilson, I.A., Ward, A.B.
PDB entry 6die: Crystal structure of Tdp1 catalytic domain in complex with Zenobia fragment benzene-1,2,4-tricarboxylic acid from single soak
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2018-05-23
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6dif: Wild-type HIV-1 protease in complex with tipranavir
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2018-05-23
Authors: Wong-Sam, A.E., Wang, Y.-F., Weber, I.T.
PDB entry 6dig: Crystal structure of DQA1*01:02/DQB1*06:02 in complex with a hypocretin peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2018-05-23
Authors: Birtley, J.R., Stern, L.J., Mellins, E.D., Jiang, W.
PDB entry 6dih: Crystal structure of Tdp1 catalytic domain in complex with Sigma Aldrich compound PH004941
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2018-05-23
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6dii: Structure of Arabidopsis Fatty Acid Amide Hydrolase in Complex with methyl linolenyl fluorophosphonate
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2018-05-23
Authors: Aziz, M., Wang, X., Tripathi, A., Bankaitis, V., Chapman, K.D.
PDB entry 6dik: Crystal structure of Bothropstoxin I (BthTX-I) complexed to Chicoric acid
Classification: TOXIN
Source organism: Bothrops jararacussu
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2018-05-23
Authors: Cardoso, F.F., Salvador, G.H.M., Borges, R.J.
PDB entry 6dil: HIV-1 protease with single mutation L76V in complex with tipranavir
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.482 Å
Deposited: 2018-05-23
Authors: Wong-Sam, A.E., Wang, Y.-F., Weber, I.T.
PDB entry 6dim: Crystal structure of Tdp1 catalytic domain in complex with Zenobia fragment ZT1982 from cocktail soak
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2018-05-23
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6din: High resolutionstructure of apo dTDP-4-dehydrorhamnose 3,5-epimerase
Classification: ISOMERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-05-23
Authors: Chang, C., Jedrzejczak, R., Chhor, G., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6dio: Structure of class II HMG-CoA reductase from Delftia acidovorans with NAD bound
Classification: OXIDOREDUCTASE
Source organism: Delftia acidovorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2018-05-23
Authors: Ragwan, E.R., Arai, E., Kung, Y.
PDB entry 6diq: Crystal structure of HCV NS3/4A protease in complex with P4-P5-1 (WK-23)
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.579 Å
Deposited: 2018-05-23
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6dir: Crystal structure of HCV NS3/4A protease in complex with P4-P5-2 (AJ-67)
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.751 Å
Deposited: 2018-05-23
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6dis: Crystal structure of HCV NS3/4A protease in complex with P4-1 (AJ-71)
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.921 Å
Deposited: 2018-05-23
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6dit: Crystal structure of HCV NS3/4A protease in complex with P4-2 (JZ01-19)
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.789 Å
Deposited: 2018-05-23
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6diu: Crystal structure of HCV NS3/4A protease in complex with P4-3(AJ-74)
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.868 Å
Deposited: 2018-05-23
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6div: Crystal structure of HCV NS3/4A D168A protease in complex with P4-P5-2 (AJ-67)
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2018-05-23
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6diw: Crystal structure of HCV NS3/4A D168A protease in complex with P4-1 (AJ-71)
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2018-05-23
Authors: Matthew, A.N., Schiffer, C.A.
PDB entry 6dix: NFVFGT segment from Human Immunoglobulin Light-Chain Variable Domain, Residues 98-103, assembled as an amyloid fibril
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2018-05-23
Authors: Brumshtein, B., Esswein, S.R., Sawaya, M.R., Eisenberg, D.S.
PDB entry 6diy: YTFGQ segment from Human Immunoglobulin Light-Chain Variable Domain, Residues 96-100, assembled as an amyloid fibril
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2018-05-24
Authors: Brumshtein, B., Esswein, S.R., Sawaya, M.R., Eisenberg, D.S.
PDB entry 6diz: EV-A71 strain 11316 complexed with tryptophan dendrimer MADAL_0385
Classification: VIRUS
Source organism: Enterovirus A71
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2018-05-24
Authors: Sun, L., Lee, H., Thibaut, H.J., Rivero-Buceta, E., Martinez-Gualda, B., Delang, L., Leyssen, P., Gago, F., San-Felix, A., Hafenstein, S., Mirabelli, C., Neyts, J.
PDB entry 6dj0: ASLTVS segment from Human Immunoglobulin Light-Chain Variable Domain, Residues 73-78, assembled as an amyloid fibril
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2018-05-24
Authors: Brumshtein, B., Esswein, S.R., Sawaya, M.R., Eisenberg, D.S.
PDB entry 6dj1: Wild-type HIV-1 protease in complex with Lopinavir
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2018-05-24
Authors: Wang, Y.-F., Wong-Sam, A.E., Zhang, Y., Weber, I.T.
PDB entry 6dj2: HIV-1 protease with single mutation L76V in complex with Lopinavir
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2018-05-24
Authors: Wang, Y.-F., Wong-Sam, A.E., Zhang, Y., Weber, I.T.
PDB entry 6dj3: Crystal structure of CNNM2 cyclic nucleotide-binding homology domain
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2018-05-24
Authors: Chen, Y.S., Gehring, K.
PDB entry 6dj4: Crystal Structure of Bacillus thuringiensis Cry1A.105 Tryptic Core
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2018-05-24
Authors: Rydel, T.J., Sturman, E.J., Lee, T.C.
PDB entry 6dj5: HIV-1 protease with mutation L76V in complex with GRL-0519 (tris-tetrahydrofuran as P2 ligand)
Classification: Hydrolase, Viral protein
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-05-24
Authors: Wong-Sam, A.E., Wang, Y.F., Weber, I.T.
PDB entry 6dj6: The X-ray crystal structure of the Streptococcus pneumoniae Fatty Acid Kinase (Fak) B2 protein loaded with cis-oleic acid to 1.9 Angstrom resolution
Classification: TRANSFERASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2018-05-24
Authors: Cuypers, M.G., Subramanian, C., White, S.W., Rock, C.O.
PDB entry 6dj7: HIV-1 protease with mutation L76V in complex with GRL-5010 (gem-difluoro-bis-tetrahydrofuran as P2 ligand)
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2018-05-24
Authors: Wong-Sam, A.E., Wang, Y.F., Weber, I.T.
PDB entry 6dj8: Structure of DNA polymerase III subunit beta from Borrelia burgdorferi in complex with a natural product
Classification: DNA BINDING PROTEIN
Source organism: Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2018-05-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6dj9: Structure of the USP15 DUSP domain in complex with a high-affinity Ubiquitin Variant (UbV)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-05-24
Authors: Singer, A.U., Teyra, J., Boehmelt, G., Lenter, M., Sicheri, F., Sidhu, S.S.
PDB entry 6dja: ZN-DEPENDENT 5/B/6 METALLO-BETA-LACTAMASE FROM BACILLUS CEREUS
Classification: HYDROLASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2018-05-24
Authors: Bui, A.A., Khan, N.H., Shaw, R.W., Sutton, R.B.
PDB entry 6djb: Structure of human Volume Regulated Anion Channel composed of SWELL1 (LRRC8A)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2018-05-24
Authors: Kefauver, J.M., Saotome, K., Pallesen, J., Cottrell, C.A., Ward, A.B., Patapoutian, A.
PDB entry 6djc: Crystal structure of human Bromodomain-containing protein 4 (BRD4) bromodomain with MS645
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2018-05-25
Authors: Ren, C., Zhou, M.M.
PDB entry 6djd: Crystal structure of Tdp1 catalytic domain in complex with Zenobia fragment ZT1982 (single soak)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.777 Å
Deposited: 2018-05-25
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6dje: Crystal structure of Tdp1 catalytic domain in complex with Sigma Aldrich compound CDS010292
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.705 Å
Deposited: 2018-05-25
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6djf: Crystal structure of Tdp1 catalytic domain in complex with compound XZ502
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2018-05-25
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6djg: Crystal structure of Tdp1 catalytic domain in complex with compound XZ503
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2018-05-25
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6djh: Crystal structure of Tdp1 catalytic domain in complex with compound XZ515
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.918 Å
Deposited: 2018-05-25
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6dji: Crystal structure of Tdp1 catalytic domain in complex with compound XZ522
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2018-05-25
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6djj: Crystal structure of Tdp1 catalytic domain in complex with compound XZ532
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.741 Å
Deposited: 2018-05-25
Authors: Lountos, G.T., Zhao, X.Z., Kiselev, E., Tropea, J.E., Needle, D., Burke Jr., T.R., Pommier, Y., Waugh, D.S.
PDB entry 6djk: Structure of DNA polymerase III subunit beta from Rickettsia typhi in complex with a natural product
Classification: DNA BINDING PROTEIN/INHIBITOR
Source organism: Rickettsia typhi str. Wilmington; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2018-05-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6djl: Crystal structure of the Rab11 GEF SH3BP5 bound to nucleotide free Rab11A
Classification: SIGNALING PROTEIN/PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.10001 Å
Deposited: 2018-05-25
Authors: Burke, J.E., Jenkins, M.L., Boulanger, M.J.
PDB entry 6djm: Cryo-EM structure of AMPPNP-actin filaments
Classification: CONTRACTILE PROTEIN
Source organism: Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2018-05-25
Authors: Chou, S.Z., Pollard, T.D.
PDB entry 6djn: Cryo-EM structure of ADP-Pi-actin filaments
Classification: CONTRACTILE PROTEIN
Source organism: Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2018-05-25
Authors: Chou, S.Z., Pollard, T.D.
PDB entry 6djo: Cryo-EM structure of ADP-actin filaments
Classification: CONTRACTILE PROTEIN
Source organism: Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2018-05-25
Authors: Chou, S.Z., Pollard, T.D.
PDB entry 6djp: Integrin alpha-v beta-8 in complex with the Fabs 8B8 and 68
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2018-05-25
Authors: Cormier, A., Campbell, M.G., Nishimura, S.L., Cheng, Y.
PDB entry 6djq: Vps1 GTPase-BSE fusion complexed with GDP.AlF4-
Classification: HYDROLASE
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2018-05-25
Authors: Varlakhanova, N.V., Brady, T.M., Tornabene, B.A., Hosford, C.J., Chappie, J.S., Ford, M.G.J.