LiteFold/PDB huggingface dataset:
PDB entry 3k12: Crystal structure of an uncharacterized protein A6V7T0 from Pseudomonas aeruginosa
Classification: structural genomics, unknown function
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2009-09-25
Authors: Ho, M., Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3k13: Structure of the pterin-binding domain MeTr of 5-methyltetrahydrofolate-homocysteine methyltransferase from Bacteroides thetaiotaomicron
Classification: TRANSFERASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-09-25
Authors: Cuff, M.E., Li, H., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3k14: Co-crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei with FOL fragment 535, ethyl 3-methyl-5,6-dihydroimidazo[2,1-b][1,3]thiazole-2-carboxylate
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-09-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3k15: Crystal Structure of BRCA1 BRCT D1840T in complex with a minimal recognition tetrapeptide with an amidated C-terminus
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-09-25
Authors: Campbell, S.J., Edwards, R.A., Glover, J.N.
PDB entry 3k16: Crystal Structure of BRCA1 BRCT D1840T in complex with a minimal recognition tetrapeptide with a free carboxy C-terminus
Classification: ISOMERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-09-25
Authors: Campbell, S.J., Edwards, R.A., Glover, J.N.
PDB entry 3k17: Crystal structure of a Lin0012 protein from Listeria innocua
Classification: TRANSFERASE
Source organism: Listeria innocua
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-09-25
Authors: Palani, K., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3k18: Tellurium modified DNA-8mer
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-09-25
Authors: Sheng, J., Hassan, A.E.A., Zhang, W., Huang, Z.
PDB entry 3k19: OmpF porin
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.79 Å
Deposited: 2009-09-26
Authors: Kefala, G., Ahn, C., Krupa, M., Maslennikov, I., Kwiatkowski, W., Choe, S., Center for Structures of Membrane Proteins (CSMP)
PDB entry 3k1a: Insights into substrate binding at FeMo-cofactor in nitrogenase from the structure of an alpha-70Ile MoFe protein variant
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2009-09-26
Authors: Peters, J.W., Sarma, R., Barney, B.M., Keable, S., Seefeldt, L.C., Dean, D.R.
PDB entry 3k1b: Structure of OmpF porin
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 4.39 Å
Deposited: 2009-09-26
Authors: Kefala, G., Ahn, C., Krupa, M., Maslennikov, I., Kwiatkowski, W., Choe, S., Center for Structures of Membrane Proteins (CSMP)
PDB entry 3k1d: Crystal structure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2009-09-27
Authors: Pal, K., Kumar, S., Swaminathan, K.
PDB entry 3k1e: Crystal structure of odorant binding protein 1 (AaegOBP1) from Aedes aegypti
Classification: ODORANT BINDING PROTEIN
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-09-27
Authors: Leite, N.R., Krogh, R., Leal, W.S., Iulek, J., Oliva, G.
PDB entry 3k1f: Crystal structure of RNA Polymerase II in complex with TFIIB
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 4.3 Å
Deposited: 2009-09-27
Authors: Kostrewa, D., Zeller, M.E., Armache, K.-J., Seizl, M., Leike, K., Thomm, M., Cramer, P.
PDB entry 3k1g: Crystal structure of Dipeptide Epimerase from Enterococcus faecalis V583 complexed with Mg and dipeptide L-Ser-L-Tyr
Classification: ISOMERASE
Source organism: Enterococcus faecalis V583
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-09-27
Authors: Fedorov, A.A., Fedorov, E.V., Imker, H.J., Sakai, A., Gerlt, J.A., Almo, S.C.
PDB entry 3k1h: Crystal structure of HP1076 from H.pylori
Classification: CHAPERONE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2009-09-28
Authors: Lam, W.W.L., Ling, T.K.W., Woo, E.J., Au, S.W.N.
PDB entry 3k1i: Crystal strcture of FliS-HP1076 complex in H. pylori
Classification: CHAPERONE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-09-28
Authors: Lam, W.W.L., Kotaka, M., Ling, T.K.W., Au, S.W.N.
PDB entry 3k1j: Crystal structure of Lon protease from Thermococcus onnurineus NA1
Classification: HYDROLASE
Source organism: Thermococcus onnurineus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-09-28
Authors: Cha, S.S., An, Y.J.
PDB entry 3k1k: Green fluorescent protein bound to enhancer nanobody
Classification: LUMINESCENT PROTEIN/IMMUNE SYSTEM
Source organism: Aequorea Victoria; Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-09-28
Authors: Kirchhofer, A., Helma, J., Schmidthals, K., Frauer, C., Cui, S., Karcher, A., Pellis, M., Muyldermans, S., Delucci, C.C., Cardoso, M.C., Leonhardt, H., Hopfner, K.-P., Rothbauer, U.
PDB entry 3k1l: Crystal Structure of FANCL
Classification: LIGASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-09-28
Authors: Cole, A.R., Walden, H.
PDB entry 3k1m: Crystal Structure of full-length BenM, R156H mutant
Classification: TRANSCRIPTION
Source organism: Acinetobacter sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2009-09-28
Authors: Ruangprasert, A., Momany, C., Neidle, E.L., Craven, S.H.
PDB entry 3k1n: Crystal Structure of full-length BenM
Classification: TRANSCRIPTION
Source organism: Acinetobacter sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2009-09-28
Authors: Ruangprasert, A., Momany, C., Neidle, E.L., Craven, S.H.
PDB entry 3k1o: Crystal structure of sterol 14-alpha demethylase (CYP51) from Trypanosoma cruzi in complex with a potential antichagasic drug, posaconazole
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2009-09-28
Authors: Lepesheva, G.I., Hargrove, T.Y., Anderson, S., Wawrzak, Z., Waterman, M.R.
PDB entry 3k1p: Crystal Structure of full-length BenM E226K mutant
Classification: TRANSCRIPTION
Source organism: Acinetobacter sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-09-28
Authors: Ruangprasert, A., Momany, C., Neidle, E.L., Craven, S.H.
PDB entry 3k1q: Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics
Classification: VIRUS
Source organism: Grass carp reovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2009-09-28
Authors: Cheng, L.P., Zhu, J., Hiu, W.H., Zhang, X.K., Honig, B., Fang, Q., Zhou, Z.H.
PDB entry 3k1r: Structure of harmonin NPDZ1 in complex with the SAM-PBM of Sans
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-09-28
Authors: Pan, L., Yan, J., Zhang, M.
PDB entry 3k1s: Crystal Structure of the PTS Cellobiose Specific Enzyme IIA from Bacillus anthracis
Classification: TRANSFERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-09-28
Authors: Anderson, S.M., Wawrzak, Z., Onopriyenko, O., Kwon, K., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3k1t: Crystal structure of Putative gamma-glutamylcysteine synthetase (YP_546622.1) from METHYLOBACILLUS FLAGELLATUS KT at 1.90 A resolution
Classification: LIGASE
Source organism: Methylobacillus flagellatus KT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-09-28
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3k1u: Beta-xylosidase, family 43 glycosyl hydrolase from Clostridium acetobutylicum
Classification: HYDROLASE
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-09-28
Authors: Osipiuk, J., Wu, R., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3k1v: Cocrystal structure of a mutant class-I preQ1 riboswitch
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-09-28
Authors: Klein, D.J., Edwards, T.E., Ferre-D'Amare, A.R.
PDB entry 3k1w: New Classes of Potent and Bioavailable Human Renin Inhibitors
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-09-29
Authors: Prade, L.
PDB entry 3k1x: Acidic Fibroblast Growth Factor (FGF-1) complexed with dobesilate
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2009-09-29
Authors: Romero, A., Fernandez, I.S., Gimenez-Gallego, G.
PDB entry 3k1y: X-ray structure of oxidoreductase from corynebacterium diphtheriae. orthorombic crystal form, northeast structural genomics consortium target cdr100d
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-09-29
Authors: Kuzin, A., Lew, S., Sahdev, S., Xiao, R., Ciccosanti, C., Wang, H., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3k1z: Crystal Structure of Human Haloacid Dehalogenase-like Hydrolase Domain containing 3 (HDHD3)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-09-29
Authors: Ugochukwu, E., Guo, K., Yue, W.W., Pilka, E., Picaud, S., Muniz, J., Pike, A.C.W., Krojer, T., Gomes, M., von Delft, F., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A., Kavanagh, K., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 3k20: X-ray structure of oxidoreductase from corynebacterium diphtheriae,hexagonal crystal form. northeast structural genomics consortium target cdr100d
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-09-29
Authors: Kuzin, A., Lew, S., Sahdev, S., Xiao, R., Ciccosanti, C., Wang, H., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3k21: Crystal Structure of carboxy-terminus of PFC0420w.
Classification: TRANSFERASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2009-09-29
Authors: Wernimont, A.K., Hutchinson, A., Artz, J.D., Mackenzie, F., Cossar, D., Kozieradzki, I., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Hui, R., Amani, M., Structural Genomics Consortium (SGC)
PDB entry 3k22: Glucocorticoid Receptor with Bound alaninamide 10 with TIF2 peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-09-29
Authors: Biggadike, K.B., McLay, I.M., Madauss, K.P., Williams, S.P., Bledsoe, R.K.
PDB entry 3k23: Glucocorticoid Receptor with Bound D-prolinamide 11
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-09-29
Authors: Biggadike, K.B., McLay, I.M., Madauss, K.P., Williams, S.P., Bledsoe, R.K.
PDB entry 3k24: Crystal structure of mature apo-Cathepsin L C25A mutant in complex with Gln-Leu-Ala peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-09-29
Authors: Adams-Cioaba, M.A., Krupa, J.C., Mort, J.S., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Min, J., Structural Genomics Consortium (SGC)
PDB entry 3k25: Crystal Structure of Slr1438 protein from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR112
Classification: Structural Genomics, Unknown function
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.551 Å
Deposited: 2009-09-29
Authors: Kuzin, A., Su, M., Seetharaman, J., Sahdev, S., Xiao, R., Ciccosanti, C., Belote, R.L., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3k26: Complex structure of EED and trimethylated H3K4
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2009-09-29
Authors: Bian, C.B., Xu, C., Qiu, W., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Min, J., Structural Genomics Consortium (SGC)
PDB entry 3k27: Complex structure of EED and trimethylated H3K9
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2009-09-29
Authors: Bian, C.B., Xu, C., Qiu, W., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Min, J., Structural Genomics Consortium (SGC)
PDB entry 3k28: Crystal Structure of a glutamate-1-semialdehyde aminotransferase from Bacillus anthracis with bound Pyridoxal 5'Phosphate
Classification: isomerase, transferase
Source organism: Bacillus anthracis str. 'Ames Ancestor'
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-09-29
Authors: Sharma, S.S., Brunzelle, J.S., Wawrzak, Z., Skarina, T., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3k29: Structure of a putative YscO homolog CT670 from Chlamydia trachomatis
Classification: UNKNOWN FUNCTION
Source organism: Chlamydia trachomatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-09-29
Authors: Lam, R., Singer, A., Skarina, T., Onopriyenko, O., Bochkarev, A., Brunzelle, J.S., Edwards, A.M., Anderson, W.F., Chirgadze, N.Y., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3k2a: Crystal structure of the homeobox domain of human homeobox protein Meis2
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-09-29
Authors: Lam, R., Soloveychik, M., Battaile, K.P., Romanov, V., Lam, K., Beletskaya, I., Gordon, E., Pai, E.F., Chirgadze, N.Y.
PDB entry 3k2b: Crystal structure of photosynthetic A4 isoform glyceraldehyde-3-phosphate dehydrogenase complexed with NAD, from Arabidopsis thaliana
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-09-29
Authors: Fermani, S., Falini, G., Thumiger, A., Sparla, F., Marri, L., Trost, P.
PDB entry 3k2c: Crystal structure of peptidyl-prolyl cis-trans isomerase from Encephalitozoon cuniculi at 1.9 A resolution
Classification: ISOMERASE
Source organism: Encephalitozoon cuniculi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-09-29
Authors: SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3k2d: Crystal structure of Immunogenic lipoprotein A from Vibrio vulnificus
Classification: IMMUNE SYSTEM
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-09-30
Authors: Yu, S., Rhee, S.
PDB entry 3k2e: Crystal structure of enoyl-(acyl-carrier-protein) reductase from Anaplasma phagocytophilum at 1.9A resolution
Classification: OXIDOREDUCTASE
Source organism: Anaplasma phagocytophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-09-30
Authors: Abendroth, J., Staker, B., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3k2f: Nitric oxide-donating carbonic anhydrase inhibitors for the treatment of open-angle glaucoma
Classification: LYASE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2009-09-30
Authors: Temperini, C., Cecchi, A.
PDB entry 3k2g: Crystal structure of a Resiniferatoxin-binding protein from Rhodobacter sphaeroides
Classification: Resiniferatoxin binding protein
Source organism: Rhodobacter sphaeroides 2.4.1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-09-30
Authors: Kumaran, D., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3k2h: Co-crystal structure of dihydrofolate reductase/thymidylate synthase from Babesia bovis with dUMP, Pemetrexed and NADP
Classification: TRANSFERASE
Source organism: Babesia bovis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-09-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3k2i: Human Acyl-coenzyme A thioesterase 4
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-09-30
Authors: Siponen, M.I., Moche, M., Arrowsmith, C.H., Berglund, H., Bountra, C., Collins, R., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Kallas, A., Karlberg, T., Kraulis, P., Kotenyova, T., Kotzsch, A., Markova, N., Nielsen, T.K., Nordlund, P., Nyman, T., Persson, C., Roos, A.K., Schutz, P., Svensson, L., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Wahlberg, E., Weigelt, J., Welin, M., Wisniewska, M., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3k2j: Crystal Structure of the 3rd Bromodomain of Human Poly-bromodomain containing protein 1 (PB1)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-09-30
Authors: Filippakopoulos, P., Picaud, S., Keates, T., Chaikuad, A., Pike, A.C.W., Krojer, T., Sethi, R., von Delft, F., Arrowsmith, C.H., Edwards, A., Weigelt, J., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3k2k: Crystal structure of putative carboxypeptidase (YP_103406.1) from BURKHOLDERIA MALLEI ATCC 23344 at 2.49 A resolution
Classification: HYDROLASE
Source organism: Burkholderia mallei ATCC 23344
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2009-09-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3k2l: Crystal Structure of dual-specificity tyrosine phosphorylation regulated kinase 2 (DYRK2)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2009-09-30
Authors: Filippakopoulos, P., Myrianthopoulos, V., Soundararajan, M., Krojer, T., Hapka, E., Fedorov, O., Berridge, G., Wang, J., Shrestha, L., Pike, A.C.W., Ugochukwu, E., von Delft, F., Arrowsmith, C.H., Edwards, A., Weigelt, J., Bountra, C., Mikros, E., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3k2m: Crystal Structure of Monobody HA4/Abl1 SH2 Domain Complex
Classification: SIGNALING PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-09-30
Authors: Wojcik, J.B., Duguid, E.
PDB entry 3k2n: The crystal structure of sigma-54-dependent transcriptional regulator domain from Chlorobium Tepidum TLS
Classification: transcription regulator
Source organism: Chlorobium tepidum TLS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-09-30
Authors: Wu, R., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3k2o: Structure of an oxygenase
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-09-30
Authors: Krojer, T., McDonough, M.A., Clifton, I.J., Mantri, M., Ng, S.S., Pike, A.C.W., Butler, D.S., Webby, C.J., Kochan, G., Bhatia, C., Bray, J.E., Chaikuad, A., Gileadi, O., von Delft, F., Weigelt, J., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Schofield, C.J., Kavanagh, K.L., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 3k2p: HIV-1 Reverse Transcriptase Isolated RnaseH Domain with the Inhibitor beta-thujaplicinol Bound at the Active Site
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2009-09-30
Authors: Pauly, T.A., Himmel, D.M., Maegley, K., Arnold, E.
PDB entry 3k2q: Crystal structure of Pyrophosphate-dependent phosphofructokinase from Marinobacter aquaeolei, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MqR88
Classification: TRANSFERASE
Source organism: Marinobacter aquaeolei VT8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-09-30
Authors: Seetharaman, J., Lew, S., Wang, D., Neely, H., Janjua, K., Cunningham, K., Owens, L., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3k2r: Crystal Structure of Spin Labeled T4 Lysozyme Mutant K65V1/R76V1
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-09-30
Authors: Toledo Warshaviak, D., Cascio, D., Khramtsov, V.V., Hubbell, W.L.
PDB entry 3k2s: Solution structure of double super helix model
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION SCATTERING
Deposited: 2009-09-30
Authors: Wu, Z., Gogonea, V., Lee, X., Wagner, M.A., Li, X.-M., Huang, Y., Undurti, A., May, R.P., Haertlein, M., Moulin, M., Gutsche, I., Zaccai, G., Didonato, J.A., Hazen, L.S.
PDB entry 3k2t: Crystal structure of Lmo2511 protein from Listeria monocytogenes, northeast structural genomics consortium target LkR84A
Classification: structural genomics, unknown function
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-09-30
Authors: Seetharaman, J., Su, M., Wang, D., Janjua, H., Cunningham, K., Owens, L., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3k2u: Crystal structure of HGFA in complex with the allosteric inhibitory antibody Fab40
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-09-30
Authors: Ganesan, R., Eigenbrot, C., Shia, S.
PDB entry 3k2v: Structure of the CBS pair of a putative D-arabinose 5-phosphate isomerase from Klebsiella pneumoniae subsp. pneumoniae.
Classification: ISOMERASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-09-30
Authors: Cuff, M.E., Volkart, L., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3k2w: CRYSTAL STRUCTURE OF betaine-aldehyde dehydrogenase FROM Pseudoalteromonas atlantica T6c
Classification: OXIDOREDUCTASE
Source organism: Pseudoalteromonas atlantica T6c
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-09-30
Authors: Patskovsky, Y., Toro, R., Rutter, M., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3k2x: Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei in complex with 5'-iodo-cytosine
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-09-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3k2y: Crystal structure of protein lp_0118 from Lactobacillus plantarum,northeast structural genomics consortium target LpR91B
Classification: Nucleotide binding protein
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-09-30
Authors: Seetharaman, J., Lew, S., Vorobiev, S.M., Wang, D., Janjua, H., Cunningham, K., Owens, L., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3k2z: Crystal structure of a LexA protein from Thermotoga maritima
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2009-09-30
Authors: Zhang, A.P.P., Rice, P.A.
PDB entry 3k30: Histamine dehydrogenase from Nocardiodes simplex
Classification: OXIDOREDUCTASE
Source organism: Pimelobacter simplex
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-09-30
Authors: Scott, E.E., Reed, T.M., Limburg, J.
PDB entry 3k31: Crystal structure of eonyl-(acyl-carrier-protein) reductase from anaplasma phagocytophilum in complex with nad at 1.9a resolution
Classification: OXIDOREDUCTASE
Source organism: Anaplasma phagocytophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-09-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3k32: The crystal structure of predicted subunit of tRNA methyltransferase from Methanocaldococcus jannaschii DSM
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-09-30
Authors: Wu, R., Zhang, R., Freeman, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3k33: Crystal structure of the Phd-Doc complex
Classification: TOXIN/ANTITOXIN
Source organism: Enterobacteria phage P1; unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-01
Authors: Loris, R., Garcia-Pino, A.
PDB entry 3k34: Human carbonic anhydrase II with a sulfonamide inhibitor
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2009-10-01
Authors: Behnke, C.A., Le Trong, I., Merritt, E.A., Teller, D.C., Stenkamp, R.E.
PDB entry 3k35: Crystal Structure of Human SIRT6
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-01
Authors: Pan, P.W., Dong, A., Qiu, W., Loppnau, P., Wang, J., Ravichandran, M., Bochkarev, A., Bountra, C., Weigelt, J., Arrowsmith, C.H., Min, J., Edwards, A.M., Structural Genomics Consortium (SGC)
PDB entry 3k36: Crystal Structure of B/Perth Neuraminidase
Classification: HYDROLASE
Source organism: Influenza B virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-10-02
Authors: Oakley, A.J., McKimm-Breschkin, J.L.
PDB entry 3k37: Crystal Structure of B/Perth Neuraminidase in complex with Peramivir
Classification: HYDROLASE
Source organism: Influenza B virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-02
Authors: Oakley, A.J., McKimm-Breschkin, J.L.
PDB entry 3k38: Crystal Structure of B/Perth Neuraminidase D197E mutant
Classification: HYDROLASE
Source organism: Influenza B virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2009-10-02
Authors: Oakley, A.J., McKimm-Breschkin, J.L.
PDB entry 3k39: Crystal Structure of B/Perth Neuraminidase D197E mutant in complex with Peramivir
Classification: HYDROLASE
Source organism: Influenza B virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2009-10-02
Authors: Oakley, A.J., McKimm-Breschkin, J.L.
PDB entry 3k3a: Crystal Structure of B/Perth Neuraminidase D197E mutant in complex with Oseltamivir
Classification: HYDROLASE
Source organism: Influenza B virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2009-10-02
Authors: Oakley, A.J., McKimm-Breschkin, J.L.
PDB entry 3k3b: Co-crystal structure of the human kinesin Eg5 with a novel tetrahydro-beta-carboline
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-02
Authors: Bussiere, D.E., Bellamacina, C., Le, V.
PDB entry 3k3c: The N-terminal PAS domain crystal structure of Rv1364c from Mycobacterium tuberculosis at 1.62
Classification: SIGNALING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2009-10-02
Authors: King-Scott, J., Tucker, P.A.
PDB entry 3k3d: The N-terminal PAS domain crystal structure of RV1364C from Mycobacterium Tuberculosis at 2.3 angstrom
Classification: SIGNALING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-10-02
Authors: King-Scott, J., Panjikar, S., Tucker, P.A.
PDB entry 3k3e: Crystal structure of the PDE9A catalytic domain in complex with (R)-BAY73-6691
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-10-02
Authors: Wang, H., Luo, X., Ye, M., Hou, J., Robinson, H., Ke, H.
PDB entry 3k3f: Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris
Classification: TRANSPORT PROTEIN
Source organism: Desulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-10-02
Authors: Levin, E.J., Zhou, M., New York Consortium on Membrane Protein Structure (NYCOMPS)
PDB entry 3k3g: Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris Bound to 1,3-dimethylurea
Classification: TRANSPORT PROTEIN
Source organism: Desulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-02
Authors: Levin, E.J., Zhou, M., New York Consortium on Membrane Protein Structure (NYCOMPS)
PDB entry 3k3h: Crystal structure of the PDE9A catalytic domain in complex with (S)-BAY73-6691
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-10-02
Authors: Wang, H., Luo, X., Ye, M., Hou, J., Robinson, H., Ke, H.
PDB entry 3k3i: p38alpha bound to novel DGF-out compound PF-00215955
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-10-02
Authors: Kazmirski, S.L., DiNitto, J.P.
PDB entry 3k3j: P38alpha bound to novel DFG-out compound PF-00416121
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.995 Å
Deposited: 2009-10-02
Authors: Kazmirski, S.L., DiNitto, J.P.
PDB entry 3k3k: Crystal structure of dimeric abscisic acid (ABA) receptor pyrabactin resistance 1 (PYR1) with ABA-bound closed-lid and ABA-free open-lid subunits
Classification: HORMONE RECEPTOR, SIGNALING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-10-02
Authors: Arvai, A.S., Hitomi, K., Getzoff, E.D.
PDB entry 3k3l: Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with apo Enterobactin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2009-10-02
Authors: Clifton, M.C.
PDB entry 3k3n: Crystal structure of the catalytic core domain of human PHF8
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-03
Authors: Yu, L., Wang, Y., Huang, S., Wang, J., Deng, Z., Wu, W., Gong, W., Chen, Z.
PDB entry 3k3o: Crystal structure of the catalytic core domain of human PHF8 complexed with alpha-ketoglutarate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-03
Authors: Yu, L., Wang, Y., Huang, S., Wang, J., Deng, Z., Wu, W., Gong, W., Chen, Z.
PDB entry 3k3p: Crystal Structure of the Apo Form of D-Alanine:D-Alanine Ligase (DDl) from Streptococcus mutans
Classification: LIGASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2009-10-03
Authors: Lu, Y.
PDB entry 3k3q: Crystal Structure of a Llama Antibody complexed with the C. Botulinum Neurotoxin Serotype A Catalytic Domain
Classification: IMMUNE SYSTEM
Source organism: Clostridium botulinum A str. Hall; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-10-04
Authors: Thompson, A.A., Dong, J., Marks, J.D., Stevens, R.C.
PDB entry 3k3r: Unrefined crystal structure of a LexA-DNA complex
Classification: HYDROLASE/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-10-04
Authors: Zhang, A.P.P., Pigli, Y.Z., Rice, P.A.
PDB entry 3k3s: Crystal structure of altronate hydrolase (fragment 1-84) from Shigella Flexneri.
Classification: HYDROLASE
Source organism: Shigella flexneri 2a str. 2457T
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-10-04
Authors: Hou, J., Chruszcz, M., Xu, X., Le, B., Zimmerman, M.D., Savchenko, A., Edwards, A.M., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3k3t: E185A mutant of peptidoglycan hydrolase from Sphingomonas sp. A1
Classification: HYDROLASE
Source organism: Sphingomonas sp. A1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-10-04
Authors: Maruyama, Y., Ochiai, A., Itoh, T., Mikami, B., Hashimoto, W., Murata, K.
PDB entry 3k3u: The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2009-10-05
Authors: de Serrano, V., Davis, M.F., Franzen, S.
PDB entry 3k3v: Crystal structure the GYF domain of S. Cerevisiae SMY2
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-10-05
Authors: Ash, M.R., Faelber, K.
PDB entry 3k3w: Thermostable Penicillin G acylase from Alcaligenes faecalis in orthorhombic form
Classification: HYDROLASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2009-10-05
Authors: Varshney, N.K., Kumar, R.S., Ignatova, Z., Dodson, E., Suresh, C.G.
PDB entry 3k40: Crystal structure of Drosophila 3,4-dihydroxyphenylalanine decarboxylase
Classification: LYASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-10-05
Authors: Han, Q., Ding, H., Robinson, H., Christensen, B.M., Li, J.
PDB entry 3k41: Crystal structure of sCD-MPR mutant E19Q/K137M bound to Man-6-P
Classification: Protein transport, sugar binding protein
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-10-05
Authors: Olson, L.J., Sun, G., Bohnsack, R.N., Peterson, F.C., Dahms, N.M., Kim, J.J.P.
PDB entry 3k42: Crystal structure of sCD-MPR mutant E19Q/K137M pH 7.0
Classification: protein transport, sugar binding protein
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-10-05
Authors: Olson, L.J., Sun, G., Bohnsack, R.N., Peterson, F.C., Dahms, N.M., Kim, J.J.P.
PDB entry 3k43: Crystal structure of sCD-MPR mutant E19Q/K137M pH 6.5
Classification: protein transport, sugar binding protein
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-05
Authors: Olson, L.J., Sun, G., Bohnsack, R.N., Peterson, F.C., Dahms, N.M., Kim, J.J.P.
PDB entry 3k44: Crystal Structure of Drosophila melanogaster Pur-alpha
Classification: NUCLEIC ACID BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-10-05
Authors: Graebsch, A., Roche, S., Niessing, D.
PDB entry 3k45: Alternate Binding Modes Observed for the E- and Z-isomers of 2,4-Diaminofuro[2,3d]pyrimidines as Ternary Complexes with NADPH and Mouse Dihydrofolate Reductase
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-10-05
Authors: Cody, V.
PDB entry 3k46: Crystal structure of full-length E. coli beta-glucuronidase
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-10-05
Authors: Wallace, B.D., Lane, K.T., Redinbo, M.R.
PDB entry 3k47: Alternate Binding Modes Observed for the E- and Z-Isomers of 2,4-Diaminofuro[2,3-d]pyrimidines as Ternary Complexes with NADPH and Mouse Dihydrofolate Reductase
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-10-05
Authors: Cody, V., Pace, J., Queener, S.F., Gangjee, A.
PDB entry 3k48: Crystal structure of APRIL bound to a peptide
Classification: CYTOKINE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-10-05
Authors: Hymowitz, S.G.
PDB entry 3k49: Puf3 RNA binding domain bound to Cox17 RNA 3' UTR recognition sequence site B
Classification: RNA Binding protein / RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-10-05
Authors: Zhu, D., Stumpf, C.R., Krahn, J.M., Wickens, M., Hall, T.M.T.
PDB entry 3k4a: Crystal structure of selenomethionine substituted E. coli beta-glucuronidase
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-10-05
Authors: Wallace, B.D., Orans, J., Redinbo, M.R.
PDB entry 3k4b: Pyranose 2-oxidase T169S mutant
Classification: OXIDOREDUCTASE
Source organism: Trametes ochracea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-10-05
Authors: Divne, C., Tan, T.C.
PDB entry 3k4c: Pyranose 2-oxidase H167A/T169G mutant
Classification: OXIDOREDUCTASE
Source organism: Trametes ochracea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-10-05
Authors: Divne, C., Tan, T.C.
PDB entry 3k4d: Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.393 Å
Deposited: 2009-10-05
Authors: Wallace, B.D., Redinbo, M.R.
PDB entry 3k4e: Puf3 RNA binding domain bound to Cox17 RNA 3' UTR recognition sequence site A
Classification: RNA Binding protein / RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-10-05
Authors: Zhu, D., Stumpf, C.R., Krahn, J.M., Wickens, M., Hall, T.M.T.
PDB entry 3k4f: X-Ray Crystal Structure of Human Heme Oxygenase-1 in Complex with 4-Phenyl-1-(1H-1,2,4-triazol-1-yl)-2-butanone
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2009-10-05
Authors: Rahman, M.N., Jia, Z.
PDB entry 3k4g: Crystal structure of E. coli RNA polymerase alpha subunit C-terminal domain
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-10-05
Authors: Lara-Gonzalez, S., Birktoft, J., Lawson, C.L.
PDB entry 3k4h: CRYSTAL STRUCTURE OF putative transcriptional regulator LacI from Bacillus cereus subsp. cytotoxis NVH 391-98
Classification: transcription regulator
Source organism: Bacillus cytotoxicus NVH 391-98
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-10-05
Authors: Malashkevich, V.N., Toro, R., Morano, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3k4i: CRYSTAL STRUCTURE OF uncharacterized protein PSPTO_3204 from Pseudomonas syringae pv. tomato str. DC3000
Classification: structural genomics, unknown function
Source organism: Pseudomonas syringae pv. tomato
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2009-10-05
Authors: Malashkevich, V.N., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3k4j: Pyranose 2-oxidase H450Q mutant
Classification: OXIDOREDUCTASE
Source organism: Trametes ochracea
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-05
Authors: Divne, C., Tan, T.C.
PDB entry 3k4k: Pyranose 2-oxidase F454N mutant
Classification: OXIDOREDUCTASE
Source organism: Trametes ochracea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-10-05
Authors: Divne, C., Tan, T.C.
PDB entry 3k4l: Pyranose 2-oxidase F454N mutant in complex with 2FG
Classification: OXIDOREDUCTASE
Source organism: Trametes ochracea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-10-05
Authors: Divne, C., Tan, T.C.
PDB entry 3k4m: Pyranose 2-oxidase Y456W mutant in complex with 2FG
Classification: OXIDOREDUCTASE
Source organism: Trametes ochracea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-10-05
Authors: Divne, C., Tan, T.C.
PDB entry 3k4n: Pyranose 2-oxidase F454A/S455A/Y456A mutant
Classification: OXIDOREDUCTASE
Source organism: Trametes ochracea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2009-10-05
Authors: Divne, C., Tan, T.C.
PDB entry 3k4o: Crystal Structure of Isopentenyl Phosphate Kinase from Methanocaldococcus jannaschii
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-10-05
Authors: Dellas, N., Noel, J.P.
PDB entry 3k4p: Aspergillus niger Phytase
Classification: HYDROLASE
Source organism: Aspergillus niger
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-10-06
Authors: Oakley, A.J.
PDB entry 3k4q: Aspergillus niger Phytase in complex with myo-inositol hexakis sulfate
Classification: HYDROLASE
Source organism: Aspergillus niger
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-10-06
Authors: Oakley, A.J.
PDB entry 3k4s: The structure of the catalytic domain of human PDE4d with 4-(3-Butoxy-4-methoxyphenyl)methyl-2-imidazolidone
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-10-06
Authors: Crawley, L., Cheng, R.K.Y., Wood, M., Barker, J., Felicetti, B., Whittaker, M.
PDB entry 3k4t: Crystal structure of the virion-associated protein P3 from caulimovirus
Classification: VIRAL PROTEIN, DNA-BINDING PROTEIN
Source organism: Cauliflower mosaic virus (STRAIN STRASBOURG)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2009-10-06
Authors: Dumas, C., Hoh, F.
PDB entry 3k4u: CRYSTAL STRUCTURE OF putative binding component of ABC transporter from Wolinella succinogenes DSM 1740 complexed with lysine
Classification: TRANSPORT PROTEIN
Source organism: Wolinella succinogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2009-10-06
Authors: Malashkevich, V.N., Toro, R., Morano, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3k4v: New crystal form of HIV-1 Protease/Saquinavir structure reveals carbamylation of N-terminal proline
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2009-10-06
Authors: Olajuyigbe, F.M., Demitri, N., Ajele, J.O., Maurizio, E., Randaccio, L., Geremia, S.
PDB entry 3k4w: CRYSTAL STRUCTURE OF Uncharacterized Tim-Barrel Protein Bb4693 From Bordetella Bronchiseptica
Classification: structural genomics, unknown function
Source organism: Bordetella bronchiseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2009-10-06
Authors: Malashkevich, V.N., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3k4x: Eukaryotic Sliding Clamp PCNA Bound to DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2009-10-06
Authors: McNally, R., Kuriyan, J.
PDB entry 3k4y: Crystal Structure of Isopentenyl Phosphate Kinase from M. jannaschii in complex with IPP
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2009-10-06
Authors: Dellas, N., Noel, J.P.
PDB entry 3k4z: Crystal Structure of the Cellulosomal CBM4 from Clostridium thermocellum Cellulase CbhA
Classification: SUGAR BINDING PROTEIN
Source organism: Clostridium thermocellum DSM 4150
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2009-10-06
Authors: Alahuhta, P.M., Xu, Q., Himmel, M.E., Lunin, V.V.
PDB entry 3k50: Crystal structure of Putative S41 protease (YP_211611.1) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution
Classification: HYDROLASE
Source organism: Bacteroides fragilis NCTC 9343
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-10-06
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3k51: Crystal Structure of DcR3-TL1A complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2009-10-06
Authors: Zhan, C., Patskovsky, Y., Yan, Q., Li, Z., Ramagopal, U.A., Nathenson, S.G., Almo, S.C.
PDB entry 3k52: Crystal Structure of Isopentenyl Phosphate Kinase from M. jannaschii in complex with IP
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-10-06
Authors: Dellas, N., Noel, J.P.
PDB entry 3k53: Crystal Structure of NFeoB from P. furiosus
Classification: METAL TRANSPORT
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-10-06
Authors: Eng, E.T., Dong, G., Unger, V.M.
PDB entry 3k54: Structures of human Bruton's tyrosine kinase in active and inactive conformations suggests a mechanism of activation for TEC family kinases.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2009-10-06
Authors: Marcotte, D.J., Liu, Y.-T., Arduini, R.M., Hession, C.A., Miatkowski, K., Wildes, C.P., Cullen, P.F., Hopkins, B.T., Mertsching, E., Jenkins, T.J., Romanowski, M.J., Baker, D.P., Silvian, L.F.
PDB entry 3k55: Structure of beta hairpin deletion mutant of beta toxin from Staphylococcus aureus
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2009-10-06
Authors: Kruse, A.C., Huseby, M., Shi, K., Digre, J., Ohlendorf, D.H., Earhart, C.A.
PDB entry 3k56: Crystal Structure of Isopentenyl Phosphate Kinase from M. jannaschii in complex with IPP beta-S
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2009-10-06
Authors: Dellas, N., Noel, J.P.
PDB entry 3k57: Crystal structure of E.coli Pol II-normal DNA-dATP ternary complex
Classification: TRANSFERASE/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2009-10-06
Authors: Yang, W., Wang, F.
PDB entry 3k58: Crystal structure of E.coli Pol II-normal DNA-dTTP ternary complex
Classification: TRANSFERASE/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-10-06
Authors: Yang, W., Wang, F.