LiteFold/PDB huggingface dataset:
PDB entry 8e6m: X-ray structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter WT in an inward-open, cadmium-bound state
Classification: METAL TRANSPORT
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2022-08-22
Authors: Ray, S., Gaudet, R.
PDB entry 8e6n: X-ray structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter G223W mutant in an outward-open, manganese-bound state
Classification: METAL TRANSPORT
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-08-22
Authors: Bozzi, A.T., Ray, S., Zimanyi, C.M., Nicoludis, J.M., Gaudet, R.
PDB entry 8e6o: Crystal structure of human GCN5 histone acetyltransferase domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2022-08-23
Authors: Lu, X.T., Tao, Y.J.
PDB entry 8e6q: Human TRPM2 ion channel in 1 mM ADPR
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-08-23
Authors: Wang, L., Fu, T.M., Xia, S., Wu, H.
PDB entry 8e6r: Human TRPM2 ion channel in 1 mM dADPR
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2022-08-23
Authors: Wang, L., Fu, T.M., Xia, S., Wu, H.
PDB entry 8e6s: Human TRPM2 ion channel in 1 mM dADPR and Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-08-23
Authors: Wang, L., Fu, T.M., Xia, S., Wu, H.
PDB entry 8e6t: Human TRPM2 ion channel in 1 mM BR-ADPR
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-08-23
Authors: Wang, L., Fu, T.M., Xia, S., Wu, H.
PDB entry 8e6u: Human TRPM2 ion channel in 1 mM F-dADPR
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-08-23
Authors: Wang, L., Fu, T.M., Xia, S., Wu, H.
PDB entry 8e6v: MHR1/2 and NUDT9H of human TRPM2 in 1 mM dADPR (local refinement)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-08-23
Authors: Wang, L., Fu, T.M., Xia, S., Wu, H.
PDB entry 8e6w: Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; Rho part
Classification: TRANSCRIPTION/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.27 Å
Deposited: 2022-08-23
Authors: Molodtsov, V., Wang, C., Ebright, R.H.
PDB entry 8e6x: Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; TEC part
Classification: TRANSCRIPTION, TRANSFERASE/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.27 Å
Deposited: 2022-08-23
Authors: Molodtsov, V., Wang, C.
PDB entry 8e6y: NMR structure of Sa1_V90T at 30 degrees Celsius
Classification: STRUCTURAL PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2022-08-23
Authors: Solomon, T.S., Orban, J.
PDB entry 8e6z: Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; TEC part
Classification: TRANSCRIPTION, TRANSFERASE/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-08-23
Authors: Molodtsov, V., Wang, C., Ebright, R.H.
PDB entry 8e70: Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; Rho hexamer part
Classification: TRANSCRIPTION/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-08-23
Authors: Molodtsov, V., Wang, C., Ebright, R.H.
PDB entry 8e71: Staphylococcus aureus ClpP in complex with compound 3471
Classification: CYTOSOLIC PROTEIN
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-08-23
Authors: Lee, R.E., Griffith, E.C.
PDB entry 8e72: Treponema lecithinolyticum beta-glucuronidase in complex with a ciprofloxacin-glucuronide conjugate
Classification: HYDROLASE
Source organism: Treponema lecithinolyticum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-08-23
Authors: Lietzan, A.D., Redinbo, M.R.
PDB entry 8e73: Vigna radiata supercomplex I+III2 (full bridge)
Classification: ELECTRON TRANSPORT
Source organism: Vigna radiata
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-08-23
Authors: Maldonado, M., Letts, J.A.
PDB entry 8e74: Mycobacterium tuberculosis RNAP paused elongation complex with NusG transcription factor
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2022-08-23
Authors: Delbeau, M., Darst, S.A., Campbell, E.A.
PDB entry 8e75: Crystal structure of Pcryo_0616, the aminotransferase required to synthesize UDP-N-acetyl-3-amino-D-glucosaminuronic acid (UDP-GlcNAc3NA)
Classification: TRANSFERASE
Source organism: Psychrobacter cryohalolentis K5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2022-08-23
Authors: Hofmeister, D.L., Seltzner, C.A., Bockhaus, N.J., thoden, J.B., Holden, H.M.
PDB entry 8e76: Cryo-EM structure of Apo form ME3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2022-08-23
Authors: Yu, X., Grell, T.A.J., Shaffer, P.L., Steele, R., Sharma, S., Thompson, A.A., Tresadern, G., Ortiz-Meoz, R.F., Mason, M., Gomez-Tamayo, J.C., Riley, D., Wagner, M.V., Wadia, J.
PDB entry 8e77: rystal structure of Pcryo_0616, the aminotransferase required to synthesize UDP-N-acetyl-3-amino-D-glucosaminuronic acid (UDP-GlcNAc3NA), incomplete with its external aldimine reaction intermediate
Classification: TRANSFERASE
Source organism: Psychrobacter cryohalolentis K5
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2022-08-23
Authors: Hofmeister, D.L., Seltzner, C.A., Bockhaus, N.J., Thoden, J.B., Holden, H.M.
PDB entry 8e78: Cryo-EM structure of human ME3 in the presence of citrate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2022-08-23
Authors: Yu, X., Grell, T.A.J., Shaffer, P.L., Steele, R., Sharma, S., Thompson, A.A., Tresadern, G., Ortiz-Meoz, R.F., Mason, M., Gomez-Tamayo, J.C., Riley, D., Wagner, M.V., Wadia, J.
PDB entry 8e79: Mycobacterium tuberculosis RNAP paused elongation complex with Escherichia coli NusG transcription factor
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Escherichia coli; Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2022-08-23
Authors: Delbeau, M., Darst, S.A., Campbell, E.A.
PDB entry 8e7a: Crystal structure of the p53 (Y107H) core domain orthorhombic P form
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-08-23
Authors: Lovell, S., Liu, L., Battaile, K.P., Miller, S., Karanicolas, J.
PDB entry 8e7b: Crystal structure of the p53 (Y107H) core domain monoclinic P form
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-08-23
Authors: Lovell, S., Liu, L., Battaile, K.P., Miller, S., Karanicolas, J.
PDB entry 8e7c: Crystal Structure of Porcine Deltacoronavirus (HKU-15) Mpro with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Porcine deltacoronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-08-23
Authors: Shaqra, A.M., Schiffer, C.A.
PDB entry 8e7d: Cryo-EM structure of wild-type transthyretin amyloid from heart tissue
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2022-08-23
Authors: Nguyen, B.A., Saelices, L.
PDB entry 8e7e: Cryo-EM structure of cardiac amyloid fibril from a variant ATTR I84S amyloidosis patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2022-08-23
Authors: Nguyen, B.A., Singh, V., Afrin, S., Saelices, L.
PDB entry 8e7f: Crystal structure of the autotransporter Ssp from Serratia marcescens.
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-08-23
Authors: Hor, L., Pilapitiya, A., Panjikar, S., Paxman, J.J., Heras, B.
PDB entry 8e7h: Cryo-EM structure of cardiac amyloid fibril from a wild-type amyloidosis patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-08-23
Authors: Nguyen, B.A., Saelices, L.
PDB entry 8e7i: Cryo-EM structure of cardiac amyloid fibril from a variant ATTR P24S amyloidosis patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2022-08-24
Authors: Nguyen, B.A., Saelices, L.
PDB entry 8e7j: Cryo-EM structure of cardiac amyloid fibril from a variant ATTR I84S amyloidosis patient
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-24
Authors: Nguyen, B.A., Saelices, L.
PDB entry 8e7m: Structure of the human ACE2 receptor in complex with antibody Fab fragment, 05B04
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-08-24
Authors: Barnes, C.O.
PDB entry 8e7n: Crystal structure of beluga whale Gammacoronavirus SW1 Mpro with GC-376 captured in two conformational states
Classification: VIRAL PROTEIN
Source organism: Beluga whale coronavirus SW1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-08-24
Authors: Shaqra, A.M., Schiffer, C.A.
PDB entry 8e7o: CRYSTAL STRUCTURE OF LYS48-LINKED TETRAUBIQUITIN
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-08-24
Authors: Lemma, B.E., Fushman, D.
PDB entry 8e7p: Staphylococcus aureus ClpP in complex with compound 3421
Classification: CYTOSOLIC PROTEIN
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2022-08-24
Authors: Lee, R.E., Griffith, E.C.
PDB entry 8e7q: Crystal Structure of FosB from Bacillus cereus with Zinc and 2-Phosphonopropionic acid
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-08-24
Authors: Travis, S., Tsodikov, O.V., Garneau-Tsodikova, S., Thompson, M.K.
PDB entry 8e7r: Crystal Structure of FosB from Bacillus cereus with Zinc and Phosphonoacetate
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.975 Å
Deposited: 2022-08-24
Authors: Travis, S., Tsodikov, O.V., Garneau-Tsodikova, S., Thompson, M.K.
PDB entry 8e7s: III2IV2 respiratory supercomplex from Saccharomyces cerevisiae with 4 bound UQ6
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-08-24
Authors: Hryc, C.F., Mileykovskaya, E., Baker, M., Dowhan, W.
PDB entry 8e7t: Crystal structure of Middle East respiratory syndrome coronavirus (MERS-CoV) 3CL protease inactive mutant C148A
Classification: VIRAL PROTEIN
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-08-24
Authors: Shaqra, A.M., Zvornicanin, S.N., Schiffer, C.A.
PDB entry 8e7u: F93A Horse Liver Alcohol Dehydrogenase in Complex with NADH and N-Cyclohexylformamide
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2022-08-24
Authors: Zheng, C., Boxer, S.G.
PDB entry 8e7v: Cryo-EM structure of substrate-free DNClpX.ClpP from singly capped particles
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-24
Authors: Ghanbarpour, A., Cohen, S., Davis, J.H., Sauer, R.T.
PDB entry 8e7w: RsTSPO A139T with Heme
Classification: MEMBRANE PROTEIN
Source organism: Cereibacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-08-25
Authors: Liu, J., Hiser, C., Li, F., Garavito, R., Ferguson-Miller, S.
PDB entry 8e7x: RsTSPO A138F with one Heme bound
Classification: MEMBRANE PROTEIN
Source organism: Cereibacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-08-25
Authors: Liu, J., Hiser, C., Li, F., Garavito, R., Ferguson-Miller, S.
PDB entry 8e7y: RsTSPO A138F with two heme bound
Classification: MEMBRANE PROTEIN
Source organism: Cereibacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-08-25
Authors: Liu, J., Hiser, C., Li, F., Garavito, R., Ferguson-Miller, S.
PDB entry 8e7z: RsTSPO mutant -A138F
Classification: MEMBRANE PROTEIN
Source organism: Cereibacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-08-25
Authors: Liu, J., Hiser, C., Li, F., Garavito, R., Ferguson-Miller, S.
PDB entry 8e80: Structure of LRRK2-CHK1 10-pt. mutant complex with heteroaryl-1H-indazole LRRK2 inhibitor 14
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-08-25
Authors: Palte, R.L.
PDB entry 8e81: Structure of LRRK2-CHK1 10-pt. mutant complex with heteroaryl-1H-indazole LRRK2 inhibitor 25
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2022-08-25
Authors: Palte, R.L.
PDB entry 8e82: Mycobacterium tuberculosis RNAP elongation complex with NusG transcription factor
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2022-08-25
Authors: Delbeau, M., Darst, S.A., Campbell, E.A.
PDB entry 8e83: Structure of 2-hydroxyisoflavanone synthase from Medicago truncatula
Classification: OXIDOREDUCTASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-08-25
Authors: Pan, H., Wang, X.
PDB entry 8e84: Human PCNA mutant- C148S
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-08-25
Authors: Magrino, J., Page, B., Gaubitz, C., Kelch, B.A.
PDB entry 8e85: Human DNA polymerase eta-DNA-rG-ended primer-dGMPNPP ternary mismatch complex with Mn2+
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e86: Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mn2+
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e87: Human DNA polymerase eta-DNA-rA-ended primer-dGMPNPP ternary mismatch complex with Mg2+
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e88: Human DNA polymerase eta-DNA-rU-ended primer-dGMPNPP ternary mismatch complex with Mg2+
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e89: Human DNA polymerase eta-DNA-rU-ended primer-binary complex
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8a: Human DNA polymerase eta-DNA-dT-ended primer binary complex
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8b: Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:ground state at pH7.0 (K+ MES) with 1 Ca2+ ion
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8c: Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 30s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8d: Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 60s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8e: Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 90s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8f: Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 120s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8g: Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 180s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8h: Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 300s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8i: Structures of HLA-B8E76C loaded with long peptides reveal novel features at the N-terminus of the groove
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-08-25
Authors: Li, L., Bouvier, M.
PDB entry 8e8j: Human DNA polymerase eta-DNA-rG-ended primer-dGMPNPP ternary mismatch complex with Mg2+
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8k: Human DNA polymerase eta-DNA-rC-ended primer-dGMPNPP ternary mismatch complex with Mg2+
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-08-25
Authors: Chang, C., Gao, Y.
PDB entry 8e8l: 9H2 Fab-poliovirus 1 complex
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Homo sapiens; Human poliovirus 1 Mahoney
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2022-08-25
Authors: Charnesky, A.J.
PDB entry 8e8m: Mycobacterium tuberculosis RNAP paused elongation complex
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2022-08-25
Authors: Delbeau, M., Darst, S.A., Campbell, E.A.
PDB entry 8e8o: Cryo-EM structure of human ME3 in the presence of citrate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2022-08-25
Authors: Yu, X., Grell, T.A.J., Shaffer, P.L., Steele, R., Sharma, S., Thompson, A.A., Tresadern, G., Ortiz-Meoz, R.F., Mason, M., Gomez-Tamayo, J.C., Riley, D., Wagner, M.V., Wadia, J.
PDB entry 8e8p: GSTZ1A
Classification: ISOMERASE,TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.281 Å
Deposited: 2022-08-25
Authors: McKenna, R., Combs, J.E.
PDB entry 8e8q: Cryo-EM structure of substrate-free DNClpX.ClpP
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2022-08-25
Authors: Ghanbarpour, A., Cohen, S., Davis, J.H., Sauer, R.T.
PDB entry 8e8r: 9H2 Fab-Sabin poliovirus 3 complex
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Homo sapiens; Human poliovirus 3 strain Sabin
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2022-08-25
Authors: Charnesky, A.J.
PDB entry 8e8s: 9H2 Fab-poliovirus 2 complex
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Homo sapiens; Poliovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2022-08-25
Authors: Charnesky, A.J.
PDB entry 8e8t: Structure of the short LOR domain of human AASS
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-08-25
Authors: Khamrui, S., Lazarus, M.B.
PDB entry 8e8u: Structure of the LOR domain of human AASS
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-08-25
Authors: Khamrui, S., Lazarus, M.B.
PDB entry 8e8v: Structure of the short LOR domain of human AASS bound to N-ethylsuccinimide
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-08-25
Authors: Khamrui, S., Lazarus, M.B.
PDB entry 8e8w: Crystal structure of SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 mononuclear Fe(II) structure on the HDO cofactor assembly pathway
Classification: OXIDOREDUCTASE
Source organism: Streptomyces achromogenes subsp. streptozoticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-08-25
Authors: McBride, M.J., Boal, A.K.
PDB entry 8e8x: 9H2 Fab-Sabin poliovirus 3 complex
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Homo sapiens; Human poliovirus 3 strain Sabin
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2022-08-26
Authors: Charnesky, A.J.
PDB entry 8e8y: 9H2 Fab-Sabin poliovirus 2 complex
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Homo sapiens; Human poliovirus 2 strain Sabin
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-08-26
Authors: Charnesky, A.J.
PDB entry 8e8z: 9H2 Fab-Sabin poliovirus 1 complex
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Homo sapiens; Human poliovirus 1 strain Sabin
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2022-08-26
Authors: Charnesky, A.J.
PDB entry 8e90: Inhibition of Human Menin by SNDX-5613
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-08-26
Authors: McKeever, B.M., KULKARNI, S., McGeehan, G.M.
PDB entry 8e91: Cryo-EM structure of substrate-free ClpX.ClpP
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.57 Å
Deposited: 2022-08-26
Authors: Ghanbarpour, A., Davis, J.H., Sauer, R.T.
PDB entry 8e92: D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in intact conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2022-08-26
Authors: Chou, T.-H., Furukawa, H.
PDB entry 8e93: D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in splayed conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2022-08-26
Authors: Chou, T.-H., Furukawa, H.
PDB entry 8e94: PYD-106-bound Human GluN1a-GluN2C NMDA receptor in intact conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2022-08-26
Authors: Chou, T.-H., Furukawa, H.
PDB entry 8e95: Mycobacterium tuberculosis RNAP elongation complex
Classification: TRANSCRIPTION, TRANSFERASE/DNA/RNA
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-08-26
Authors: Delbeau, M., Darst, S.A., Campbell, E.A.
PDB entry 8e96: Glycine and glutamate bound Human GluN1a-GluN2D NMDA receptor
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2022-08-26
Authors: Kang, H., Furukawa, H.
PDB entry 8e97: PYD-106-bound Human GluN1a-GluN2C NMDA receptor in splayed conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.19 Å
Deposited: 2022-08-26
Authors: Chou, T.-H., Furukawa, H.
PDB entry 8e98: D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in nanodisc - intact conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2022-08-26
Authors: Chou, T.-H., Furukawa, H.
PDB entry 8e99: Human GluN1a-GluN2A-GluN2C triheteromeric NMDA receptor in complex with Nb-4
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.24 Å
Deposited: 2022-08-26
Authors: Chou, T.-H., Furukawa, H.
PDB entry 8e9a: Crystal structure of AsfvPolX in complex with 10-23 DNAzyme and Mg
Classification: TRANSFERASE/DNA
Source organism: African swine fever virus BA71V; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2022-08-26
Authors: Cramer, E.R., Robart, A.R., Kaya, A.I.
PDB entry 8e9b: Cryo-EM structure of S. pombe Arp2/3 complex in the branch junction
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus; Schizosaccharomyces pombe
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-08-26
Authors: Chou, S.Z., Pollard, T.P.
PDB entry 8e9c: Crystal structure of E. coli aspartate aminotransferase mutant AIFS in the ligand-free form at 100 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9d: Crystal structure of E. coli aspartate aminotransferase mutant AIFS bound to maleic acid at 100 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9e: Rat protein farnesyltransferase in complex with FPP and inhibitor 2f
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.844 Å
Deposited: 2022-08-26
Authors: Wang, Y., Shi, Y., Beese, L.S.
PDB entry 8e9f: WD repeat-containing protein 5 complexed with 4-(7-((1H-imidazol-1-yl)methyl)-5-(1-methyl-3-(trifluoromethyl)-1H-pyrazol-4-yl)-1-oxo-3,4-dihydroisoquinolin-2(1H)-yl)-6-ethyl-N-methylquinoline-8-carboxamide (compound 10)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-08-26
Authors: Rietz, T.A., Fesik, S.W.
PDB entry 8e9g: Mycobacterial respiratory complex I with both quinone positions modelled
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-08-26
Authors: Liang, Y., Rubinstein, J.L.
PDB entry 8e9h: Mycobacterial respiratory complex I, fully-inserted quinone
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-08-26
Authors: Liang, Y., Rubinstein, J.L.
PDB entry 8e9i: Mycobacterial respiratory complex I, semi-inserted quinone
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-08-26
Authors: Liang, Y., Rubinstein, J.L.
PDB entry 8e9j: Crystal structure of E. coli aspartate aminotransferase mutant HEX in the ligand-free form at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9k: Crystal structure of wild-type E. coli aspartate aminotransferase bound to maleate at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9l: Crystal structure of E. coli aspartate aminotransferase mutant VFIT in the ligand-free form at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9m: Crystal structure of E. coli aspartate aminotransferase mutant VFIT bound to maleic acid at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9n: Crystal structure of E. coli aspartate aminotransferase mutant VFIY in the ligand-free form at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9o: Crystal structure of E. coli aspartate aminotransferase mutant VFIY bound to maleic acid at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9p: Crystal structure of wild-type E. coli aspartate aminotransferase in the ligand-free form at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9q: Crystal structure of E. coli aspartate aminotransferase mutant HEX bound to maleic acid at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9r: Crystal structure of E. coli aspartate aminotransferase mutant VFCS in the ligand-free form at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9s: Crystal structure of E. coli aspartate aminotransferase mutant VFCS bound to maleic acid at 278 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9t: Crystal structure of wild-type E. coli aspartate aminotransferase in the ligand-free form at 303 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9u: Crystal structure of E. coli aspartate aminotransferase mutant HEX in the ligand-free form at 303 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9v: Crystal structure of E. coli aspartate aminotransferase mutant VFIT in the ligand-free form at 303 K
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2022-08-26
Authors: Chica, R.A., St-Jacques, A.D., Rodriguez, J.M., Thompson, M.C.
PDB entry 8e9w: CryoEM structure of miniGq-coupled hM3Dq in complex with DCZ
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2022-08-27
Authors: Zhang, S., Fay, J.F., Roth, B.L.
PDB entry 8e9x: CryoEM structure of miniGo-coupled hM4Di in complex with DCZ
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-08-27
Authors: Zhang, S., Fay, J.F., Roth, B.L.
PDB entry 8e9y: CryoEM structure of miniGq-coupled hM3Dq in complex with CNO
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2022-08-27
Authors: Zhang, S., Fay, J.F., Roth, B.L.
PDB entry 8e9z: CryoEM structure of miniGq-coupled hM3R in complex with Iperoxo
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2022-08-27
Authors: Zhang, S., Fay, J.F., Roth, B.L.
PDB entry 8ea0: CryoEM structure of miniGq-coupled hM3R in complex with iperoxo (local refinement)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2022-08-27
Authors: Zhang, S., Fay, J.F., Roth, B.L.
PDB entry 8ea1: Structure of kudzu 2-hydroxyisoflavanone dehydratase in complex with P-NITROPHENOL
Classification: PLANT PROTEIN
Source organism: Pueraria montana var. lobata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-08-27
Authors: Pan, H., Wang, X.
PDB entry 8ea2: Structure of 2-hydroxyisoflavanone dehydratase from Pueraria lobate
Classification: PLANT PROTEIN
Source organism: Pueraria montana var. lobata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.394 Å
Deposited: 2022-08-27
Authors: Pan, H., Wang, X.
PDB entry 8ea3: V-K CAST Transpososome from Scytonema hofmanni, major configuration
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Escherichia coli; Scytonema hofmannii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-08-27
Authors: Rizo, A.N., Park, J.-U., Tsai, A.W., Kellogg, E.H.
PDB entry 8ea4: V-K CAST Transpososome from Scytonema hofmanni, minor configuration
Classification: DNA BINDING PROTEIN/RNA/DNA
Source organism: Escherichia coli; Scytonema hofmannii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-08-27
Authors: Rizo, A.R., Park, J.-U., Tsai, A.W., Kellogg, E.K.
PDB entry 8ea5: NKG2D complexed with inhibitor 1a
Classification: IMMUNOSUPPRESSANT/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-08-28
Authors: Thompson, A.A., Grant, J.C., Karpowich, N.K., Sharma, S.
PDB entry 8ea6: NKG2D complexed with inhibitor 3e
Classification: IMMUNOSUPPRESSANT/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2022-08-28
Authors: Thompson, A.A., Grant, J.C., Karpowich, N.K., Sharma, S.
PDB entry 8ea7: NKG2D complexed with inhibitor 3g
Classification: IMMUNOSUPPRESSANT/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2022-08-28
Authors: Thompson, A.A., Grant, J.C., Karpowich, N.K., Sharma, S.
PDB entry 8ea8: NKG2D complexed with inhibitor 4a
Classification: IMMUNOSUPPRESSANT/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2022-08-28
Authors: Thompson, A.A., Grant, J.C., Karpowich, N.K., Sharma, S.
PDB entry 8ea9: NKG2D complexed with inhibitor 4d
Classification: IMMUNOSUPPRESSANT/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2022-08-28
Authors: Thompson, A.A., Grant, J.C., Karpowich, N.K., Sharma, S.
PDB entry 8eaa: NKG2D complexed with inhibitor 4e
Classification: IMMUNOSUPPRESSANT/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2022-08-28
Authors: Thompson, A.A., Grant, J.C., Karpowich, N.K., Sharma, S.
PDB entry 8eab: NKG2D complexed with inhibitor 4f
Classification: IMMUNOSUPPRESSANT/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2022-08-28
Authors: Thompson, A.A., Grant, J.C., Karpowich, N.K., Sharma, S.
PDB entry 8eac: Thermus thermophilus methylenetetrahydrofolate reductase
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-08-28
Authors: Yamada, K., Koutmos, M.
PDB entry 8ead: Crystal structure of the first bromodomain (BD1) of human BRD4 in complex with dual BRD4-JAK2 inhibitor MA9-177
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-08-29
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 8eae: Structure of Ternary Complex of cGAS with dsDNA and Bound 5-pppG(2,5)pI
Classification: TRANSFERASE/DNA
Source organism: DNA molecule; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2022-08-29
Authors: Wu, S., Sohn, J.
PDB entry 8eaf: SsoMCM hexamer bound to Mg/ADP-BeFx and 12-mer oligo-dT. Class 1
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Saccharolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2022-08-29
Authors: Meagher, M., Myasnikov, A., Enemark, E.J.
PDB entry 8eag: SsoMCM hexamer bound to Mg/ADP-BeFx and 12-mer oligo-dT. Class 2
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Saccharolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2022-08-29
Authors: Meagher, M., Myasnikov, A., Enemark, E.J.
PDB entry 8eah: SsoMCM hexamer bound to Mg/ADP-BeFx and 16-mer oligo-dT. Class 1
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Saccharolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2022-08-29
Authors: Meagher, M., Myasnikov, A., Enemark, E.J.
PDB entry 8eai: SsoMCM hexamer bound to Mg/ADP-BeFx and 16-mer oligo-dT. Class 2
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Saccharolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2022-08-29
Authors: Meagher, M., Myasnikov, A., Enemark, E.J.
PDB entry 8eaj: SsoMCM hexamer bound to Mg/ADP-BeFx and 46-mer DNA strand. Class 1
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Saccharolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2022-08-29
Authors: Meagher, M., Myasnikov, A., Enemark, E.J.
PDB entry 8eak: SsoMCM hexamer bound to Mg/ADP-BeFx and 46-mer DNA strand. Class 2
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Saccharolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2022-08-29
Authors: Meagher, M., Myasnikov, A., Enemark, E.J.
PDB entry 8eal: SsoMCM hexamer bound to Mg/ADP-BeFx and DNA. Class 1. Merged particles from datasets with 3 different DNA entities
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Saccharolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.34 Å
Deposited: 2022-08-29
Authors: Meagher, M., Myasnikov, A., Enemark, E.J.
PDB entry 8eam: SsoMCM hexamer bound to Mg/ADP-BeFx and DNA. Class 2. Merged particles from datasets with 3 different DNA entities
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Saccharolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2022-08-29
Authors: Meagher, M., Myasnikov, A., Enemark, E.J.
PDB entry 8ean: Cryo-EM structure of in-situ tailspike in bacteriophage P22
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-08-29
Authors: Wang, C., Liu, J., Molineux, I.J.
PDB entry 8eao: Cryo-EM structure of the in-situ gp1-gp4 complex from bacteriophage P22
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-08-29
Authors: Wang, C., Liu, J., Molineux, I.J.
PDB entry 8eap: Cryo-EM structure of the in-situ gp10-gp26 from bacteriophage P22
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-08-29
Authors: Wang, C., Liu, J., Molineux, I.J.
PDB entry 8eaq: Structure of the full-length IP3R1 channel determined at high Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2022-08-29
Authors: Fan, G., Baker, M.R., Terry, L.E., Arige, V., Chen, M., Seryshev, A.B., Baker, M.L., Ludtke, S.J., Yule, D.I., Serysheva, I.I.
PDB entry 8ear: Structure of the full-length IP3R1 channel determined in the presence of Calcium/IP3/ATP
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-08-29
Authors: Fan, G., Baker, M.R., Terry, L.E., Arige, V., Chen, M., Seryshev, A.B., Baker, M.L., Ludtke, S.J., Yule, D.I., Serysheva, I.I.
PDB entry 8eas: Yeast VO in complex with Vma12-22p
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-08-29
Authors: Wang, H., Bueler, S.A., Rubinstein, J.L.
PDB entry 8eat: Yeast VO missing subunits a, e, and f in complex with Vma12-22p
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-29
Authors: Wang, H., Bueler, S.A., Rubinstein, J.L.
PDB entry 8eau: Yeast VO in complex with Vma21p
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-29
Authors: Wang, H., Bueler, S.A., Rubinstein, J.L.
PDB entry 8eav: YAR027W and YAR028W in complex with c subunits from yeast VO complex
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.7 Å
Deposited: 2022-08-29
Authors: Wang, H., Bueler, S.A., Rubinstein, J.L.
PDB entry 8eaw: An asymmetric disk assembly formed by tandem dimers of the tobacco mosaic viral capsid protein (TMV)
Classification: VIRAL PROTEIN
Source organism: Tobacco mosaic virus (vulgare)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-08-29
Authors: Dai, J., Pereira, J.H., Adams, P.D., Francis, M.B.
PDB entry 8eax: Octameric prenyltransferase domain of fusicoccadiene Synthase with C2 symmetry sans transiently associating cyclase domains
Classification: TRANSFERASE
Source organism: Diaporthe amygdali
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2022-08-29
Authors: Faylo, J.L., van Eeuwen, T., Christianson, D.W.
PDB entry 8eay: HMPV F complex with 4I3 Fab
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens; Human metapneumovirus A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2022-08-30
Authors: Wen, X., Jardetzky, T.S.
PDB entry 8eaz: HOIL-1/E2-Ub/Ub transthiolation complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2022-08-30
Authors: Wang, X.S., Cotton, T.R., Lechtenberg, B.C.
PDB entry 8eb0: RNF216/E2-Ub/Ub transthiolation complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2022-08-30
Authors: Cotton, T.R., Wang, X.S., Lechtenberg, B.C.
PDB entry 8eb1: Chim2 - Intragenic antimicrobial peptide
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-08-30
Authors: de Freitas, T.V., Oliveira, A.L., Santos, M.A., Brand, G.D.
PDB entry 8eb2: Structure of HLA-A*02:01 in complex with NY-ESO-1 peptide and PA2.1 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-08-30
Authors: Jette, C.A., West, A.P.
PDB entry 8eb3: Crystal structure of glutamate racemase from Helicobacter pylori in complex with a fragment
Classification: ISOMERASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-08-30
Authors: Cooling, G.T., Propp, J., Spies, M.A.
PDB entry 8eb4: Gordonia phage Ziko
Classification: VIRUS
Source organism: Gordonia phage Ziko
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-08-30
Authors: Podgorski, J.M., White, S.J.
PDB entry 8eb5: Tandem of Hermes transposase BED domain in complex with the quasi palindrome of its transposon left-end
Classification: DNA BINDING PROTEIN/DNA
Source organism: Musca domestica; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-08-30
Authors: Lannes, L., Dyda, F.
PDB entry 8eb7: Cryo-EM structure of the in-situ gp4-gp10-gp9N from bacteriophage P22
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-08-30
Authors: Wang, C., Liu, J., Molineux, I.J.
PDB entry 8eb9: Crystal structure of SIX8 from Fusarium oxysporum f. sp. lycopersici
Classification: UNKNOWN FUNCTION
Source organism: Fusarium oxysporum f. sp. lycopersici
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2022-08-30
Authors: Yu, D.S., Ericsson, D.J., Williams, S.J.
PDB entry 8ebb: Crystal structure of SIX6 from Fusarium oxysporum f. sp. lycopersici
Classification: UNKNOWN FUNCTION
Source organism: Fusarium oxysporum f. sp. lycopersici
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-08-30
Authors: Yu, D.S., Ericsson, D.J., Williams, S.J.
PDB entry 8ebc: Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Listeria monocytogenes in the complex with IMP
Classification: OXIDOREDUCTASE
Source organism: Listeria monocytogenes EGD-e
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-08-31
Authors: Kim, Y., Maltseva, N., Makowska-Grzyska, M., Osipiuk, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)