LiteFold/PDB huggingface dataset:
PDB entry 8jvh: Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 in the apo state with H1 helix
Classification: TRANSPORT PROTEIN
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2023-06-28
Authors: Li, M., Si, K.
PDB entry 8jvi: Structure of human TRPV4 with antagonist A2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2023-06-28
Authors: Fan, J., Lei, X.
PDB entry 8jvj: Structure of human TRPV4 with antagonist A2 and RhoA
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2023-06-28
Authors: Fan, J., Lei, X.
PDB entry 8jvl: Identification and characterization of inhibitors covalently modifying catalytic cysteine of UBE2T and blocking ubiquitin transfer
Classification: LIGASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2023-06-28
Authors: Anantharajan, J., Baburajendran, N.
PDB entry 8jvm: AHS-CSF domains of phage lambda tail
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.86 Å
Deposited: 2023-06-28
Authors: Wang, J.
PDB entry 8jvn: Crystal structure of the mk2h_deltaMILPYS peptide homodimer, DZBB form
Classification: DNA BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.404 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvo: Crystal structure of the chemically synthesized mk2h_deltaMILPYS peptide homodimer, DZBB form
Classification: DNA BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvp: Crystal structure of the dimeric DZBB fold protein Ph1
Classification: DNA BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.302 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvq: Crystal structure of the dimeric RIFT fold protein Ph1_DG
Classification: DNA BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.401 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvr: Crystal structure of the dimeric RIFT fold protein Ph1_GG
Classification: DNA BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.794 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvs: Crystal structure of the chimeric protein tkoL2_v1
Classification: RIBOSOMAL PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvt: Crystal structure of the chimeric protein mkaL2_v1
Classification: RIBOSOMAL PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.106 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvu: Crystal structure of the chimeric protein tkoL2_v1.2
Classification: RIBOSOMAL PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.505 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvv: Crystal structure of the chimeric protein mkaL2_v1.1
Classification: RIBOSOMAL PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvw: Crystal structure of the dimeric DZBB fold protein tkoL2_v1.2_Z
Classification: DNA BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.806 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvx: Crystal structure of the dimeric DZBB fold protein mkaL2_v1.2_Z
Classification: DNA BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvy: Crystal structure of the chimeric protein tkoL2_v1_turn with shorten loop 1
Classification: RIBOSOMAL PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.895 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jvz: Crystal structure of the circular-permutated protein mkaL2_v1_SH3
Classification: RIBOSOMAL PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2023-06-28
Authors: Yagi, S., Tagami, S.
PDB entry 8jw0: PSI-AcpPCI supercomplex from Amphidinium carterae
Classification: PHOTOSYNTHESIS
Source organism: Amphidinium carterae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-06-28
Authors: Li, Z.H., Li, X.Y., Wang, W.D.
PDB entry 8jw3: The crystal structure of the viral terpene synthase from Orpheovirus IHUMI-LCC2
Classification: LYASE
Source organism: Orpheovirus IHUMI-LCC2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-06-28
Authors: Jung, Y., Mitsuhashi, T., Senda, M., Sato, S., Senda, T., Fujita, M.
PDB entry 8jw4: Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 in the apo state without H1 helix
Classification: TRANSPORT PROTEIN
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-06-28
Authors: Li, M., Si, K.
PDB entry 8jwd: Histidine kinase QseE sensor domain of Escherichia coli O157:H7
Classification: TRANSFERASE
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2023-06-28
Authors: Matsumoto, K., Fukuda, Y., Inoue, T.
PDB entry 8jwe: The open structure of the mechanosensitive channel MSL10 in Arabidopsis thaliana
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2023-06-28
Authors: Sun, L., Liu, X., Li, X.
PDB entry 8jwf: Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 with H1 helix in complex with MFQ
Classification: TRANSPORT PROTEIN
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2023-06-29
Authors: Li, M., Si, K.
PDB entry 8jwg: Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 without H1 helix in complex with MFQ
Classification: TRANSPORT PROTEIN
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2023-06-29
Authors: Li, M., Si, K.
PDB entry 8jwh: Cryo-EM structure of apo-state huamn angiotensin-converting enzyme 2 (ACE2)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2023-06-29
Authors: Yang, Z., Wang, H.W.
PDB entry 8jwi: Cryo-EM structure of the outward-facing Plasmodium falciparum multidrug resistance protein 1
Classification: TRANSPORT PROTEIN
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-06-29
Authors: Li, M., Si, K.
PDB entry 8jwj: PHD Finger Protein 7 (PHF7) in complex with UBE2D2
Classification: LIGASE
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2023-06-29
Authors: Lee, H.S., Bang, I., Choi, H.-J.
PDB entry 8jwk: The second purified state crystal structure of AKRtyl
Classification: OXIDOREDUCTASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2023-06-29
Authors: Lin, S., Dai, S., Xiao, Z.
PDB entry 8jwl: The first purified state crystal structure of AKRtyl
Classification: OXIDOREDUCTASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-06-29
Authors: Lin, S., Dai, S., Xiao, Z.
PDB entry 8jwm: Crystal structure of AKRtyl-NADP-tylosin complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-06-29
Authors: Lin, S., Dai, S., Xiao, Z.
PDB entry 8jwn: Crystal structure of AKRtyl-NADPH complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-06-29
Authors: Lin, S., Dai, S., Xiao, Z.
PDB entry 8jwo: Crystal structure of AKRtyl-tylosin complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-06-29
Authors: Lin, S., Dai, S., Xiao, Z.
PDB entry 8jws: ePHD domain of PHD Finger Protein 7 (PHF7)
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-06-29
Authors: Bang, I., Lee, H.S., Choi, H.-J.
PDB entry 8jwt: Asymmetric middle segment of the bacteriophage M13 mini variant
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage M13
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-06-29
Authors: Xiang, Y., Jia, Q.
PDB entry 8jwu: PHD Finger Protein 7 (PHF7) fused to UBE2D2 via a (GSGG)3 linker
Classification: LIGASE
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.58 Å
Deposited: 2023-06-29
Authors: Lee, H.S., Bang, I., Choi, H.-J.
PDB entry 8jwv: Untethered R0RBR
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-06-29
Authors: Lenka, D.R., Kumar, A.
PDB entry 8jww: top segment of the bacteriophage M13 mini variant
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage M13
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-06-29
Authors: Xiang, Y., Jia, Q.
PDB entry 8jwx: bottom segment of the bacteriophage M13 mini variant
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage M13
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-06-29
Authors: Xiang, Y., Jia, Q.
PDB entry 8jwy: Crystal structure of A2AR-T4L in complex with 2-118
Classification: SIGNALING PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2023-06-29
Authors: Weng, Y., Chen, Y., Xu, Y., Song, G.
PDB entry 8jwz: Crystal structure of A2AR-T4L in complex with AB928
Classification: SIGNALING PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2023-06-29
Authors: Weng, Y., Chen, Y., Xu, Y., Song, G.
PDB entry 8jx2: alpha-Hemolysin(G122S/K147R)-SpyTag/SpyCatcher head to head 14-mer
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-06-30
Authors: Ishii, Y., Naito, K., Yokoyama, T., Tanaka, Y., Matsuura, T.
PDB entry 8jx3: alpha-Hemolysin(G122S/K147R/K237C)-SpyTag/SpyCatcher head to head 14-mer
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-06-30
Authors: Ishii, Y., Naito, K., Yokoyama, T., Tanaka, Y., Matsuura, T.
PDB entry 8jx4: Structure of the catalytic domain of pseudomurein endo-isopeptidases PeiW
Classification: HYDROLASE
Source organism: Methanothermobacter phage psiM100
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-06-30
Authors: Guo, L.Z., Zhao, N.L., Len, H., Wang, S.X., Cha, G.H., Bai, L.p., Bao, R.
PDB entry 8jx6: Deep-Sea Helicase 9 (DSH9)
Classification: MOTOR PROTEIN
Source organism: metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-06-30
Authors: Wang, L., Liu, Z., Guo, F.
PDB entry 8jx7: Cryo-EM structure of human ABC transporter ABCC2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-06-30
Authors: Mao, Y.X., Chen, Z.P., Wang, L., Hou, W.T., Chen, Y.X., Zhou, C.Z.
PDB entry 8jx8: rat megalin head
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jx9: rat megalin bodyA
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxa: cryo-EM structure of rat megalin bodyB
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxb: Cryo-EM structure of rat megalin wingAc
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxc: rat megalin wingB
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxd: Cryo-EM structure of rat megalin leg
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxe: rat megalin RAP complex head
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxf: rat megalin RAP complex bodyA
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxg: rat megalin RAP complex bodyB
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxh: rat megalin RAP complex wingA
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxi: rat megalin RAP complex wingB
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxj: rat megalin RAP complex leg
Classification: ENDOCYTOSIS
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-06-30
Authors: Goto, S., Tsutsumi, A., Lee, Y., Hosojima, M., Kabasawa, H., Komochi, K., Yun-san, L., Nagatoshi, S., Tsumoto, K., Nishizawa, T., Kikkawa, M., Saito, A.
PDB entry 8jxk: Crystal Structure of Rv0047c from Mycobacterium tuberculosis
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2023-06-30
Authors: Ansari, M.S., Yadav, V., Zohib, M., Pal, R.K., Biswal, B.K., Arora, A.
PDB entry 8jxl: Human 3-methylcrotonyl-CoA carboxylase in MCCU state with MCoA
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-06-30
Authors: Liu, D.S., Su, J.Y., Tian, X.Y.
PDB entry 8jxm: Human 3-methylcrotonyl-CoA carboxylase in BCCP-H2 state with MCoA
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2023-06-30
Authors: Liu, D.S., Su, J.Y., Tian, X.Y.
PDB entry 8jxn: Human 3-methylcrotonyl-CoA carboxylase in BCCP-H1 state with MCoA
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-06-30
Authors: Liu, D.S., Su, J.Y., Tian, X.Y.
PDB entry 8jxo: Cryo-EM structure of BlCHR2 class one
Classification: MEMBRANE PROTEIN
Source organism: Bilabrum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-07-01
Authors: Zhang, M.F.
PDB entry 8jxp: Cryo-EM structure of BlCHR2 class one
Classification: MEMBRANE PROTEIN
Source organism: Bilabrum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-07-01
Authors: Zhang, M.F.
PDB entry 8jxq: Cryo-EM structure of bilirubin ditaurate (BDT) bound human ABC transporter ABCC2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2023-07-01
Authors: Mao, Y.X., Chen, Z.P., Wang, L., Hou, W.T., Chen, Y.X., Zhou, C.Z.
PDB entry 8jxr: Structure of nanobody-bound DRD1_LSD complex
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli O157:H7; Homo sapiens; Mus musculus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus Mu50; Streptococcus sp. 'group G'
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2023-07-01
Authors: Zhuang, Y., Xu, Y., Fan, L., Wang, S., Xu, H.E.
PDB entry 8jxs: Structure of nanobody-bound DRD1_PF-6142 complex
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Homo sapiens; Mus musculus; Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-07-01
Authors: Zhuang, Y., Xu, Y., Fan, L., Wang, S., Xu, H.E.
PDB entry 8jxt: Histamine-bound H4R/Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2023-07-01
Authors: He, Y., Xia, R.
PDB entry 8jxu: Cryo-EM structure of human ABC transporter ABCC2 under active turnover condition
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2023-07-01
Authors: Mao, Y.X., Chen, Z.P., Wang, L., Hou, W.T., Chen, Y.X., Zhou, C.Z.
PDB entry 8jxv: Clozapine-bound H4R/Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2023-07-01
Authors: He, Y., Xia, R.
PDB entry 8jxw: VUF6884-bound H4R/Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2023-07-01
Authors: He, Y., Xia, R.
PDB entry 8jxx: Clobenpropit-bound H4R/Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2023-07-01
Authors: He, Y., Xia, R.
PDB entry 8jxz: Chitin binding SusD-like protein AqSusD in complex with (GlcNAc)3
Classification: SUGAR BINDING PROTEIN
Source organism: Aquimarina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-07-01
Authors: Yang, J.
PDB entry 8jy0: Crystal structure of RhoBAST complexed with TMR-DN
Classification: RNA
Source organism: artificial sequences; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-07-02
Authors: Zhang, Y., Xiao, Y., Xu, Z., Fang, X.
PDB entry 8jy1: Structure of Mangifera Indica Epoxide hydrolase 2
Classification: PLANT PROTEIN
Source organism: Mangifera indica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-07-02
Authors: Bhoite, A.S., Gupta, V.S., Kulkarni, K.A.
PDB entry 8jy4: Cryo-EM structure of human ABC transporter ABCC2 in apo' state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2023-07-02
Authors: Mao, Y.X., Chen, Z.P., Wang, L., Hou, W.T., Chen, Y.X., Zhou, C.Z.
PDB entry 8jy5: Cryo-EM structure of human ABC transporter ABCC2 in apo" state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2023-07-03
Authors: Mao, Y.X., Chen, Z.P., Wang, L., Hou, W.T., Chen, Y.X., Zhou, C.Z.
PDB entry 8jy6: Structure of TbAQP2 in complex with anti-trypanosomatid drug melarsoprol
Classification: MEMBRANE PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-07-03
Authors: Chen, W., Wang, C.
PDB entry 8jy7: Structure of the TbAQP2 in the apo conformation
Classification: MEMBRANE PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-07-03
Authors: Chen, W., Wang, C.
PDB entry 8jy8: Structure of TbAQP2 in complex with anti-trypanosomatid drug pentamidine
Classification: MEMBRANE PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2023-07-03
Authors: Chen, W., Wang, C.
PDB entry 8jy9: Crystal Structure of Intracellular B30.2 Domain of VpBTN3 in Complex with HMBPP
Classification: SIGNALING PROTEIN
Source organism: Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-07-03
Authors: Yang, Y.Y., Yi, S.M., Zhang, M.T., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8jya: Crystal Structure of Intracellular B30.2 Domain of VpBTN3 in Complex with IPP
Classification: SIGNALING PROTEIN
Source organism: Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-07-03
Authors: Yang, Y.Y., Yi, S.M., Zhang, M.T., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8jyb: Crystal Structure of Intracellular B30.2 Domain of VpBTN3
Classification: SIGNALING PROTEIN
Source organism: Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2023-07-03
Authors: Yang, Y.Y., Yi, S.M., Zhang, M.T., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8jyc: Crystal Structure of Intracellular B30.2 Domain of BTN3A1 and BTN2A1 in Complex with DMAPP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2023-07-03
Authors: Yuan, L.J., Yang, Y.Y., Li, X., Cai, N.N., Chen, C.-C., Guo, R.-T., Zhang, Y.H.
PDB entry 8jyd: A genetically encoded sensor based on a bacterial DNA ligase
Classification: LIGASE
Source organism: Enterococcus faecalis (strain ATCC 700802 / V583)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-07-03
Authors: Chen, L.
PDB entry 8jye: Crystal Structure of Intracellular B30.2 Domain of BTN3A1 and BTN2A1 in Complex with HMBPP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2023-07-03
Authors: Yuan, L.J., Yang, Y.Y., Li, X., Cai, N.N., Chen, C.-C., Guo, R.-T., Zhang, Y.H.
PDB entry 8jyf: Crystal Structure of Intracellular B30.2 Domain of VpBTN3 in Complex with DMAPP
Classification: SIGNALING PROTEIN
Source organism: Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-07-03
Authors: Yang, Y.Y., Yi, S.M., Zhang, M.T., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 8jyg: Crystal structure of Human HPSE1 in complex with inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-07-03
Authors: Mima, M., Fujimoto, N., Imai, Y.
PDB entry 8jyh: Crystal structure of engineered HIV-1 Reverse Transcriptase RNase H domain complexed with laccaic acid C
Classification: VIRAL PROTEIN
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2023-07-03
Authors: Ito, Y., Lu, H., Kitajima, M., Ishikawa, H., Nakata, Y., Iwatani, Y., Hoshino, T.
PDB entry 8jyi: Crystal structure of engineered HIV-1 Reverse Transcriptase RNase H domain complexed with laccaic acid E
Classification: VIRAL PROTEIN
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-07-03
Authors: Ito, Y., Lu, H., Kitajima, M., Ishikawa, H., Nakata, Y., Iwatani, Y., Hoshino, T.
PDB entry 8jyj: Crystal structure of engineered HIV-1 Reverse Transcriptase RNase H domain complexed with laccaic acid A
Classification: VIRAL PROTEIN
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-07-03
Authors: Ito, Y., Lu, H., Kitajima, M., Ishikawa, H., Nakata, Y., Iwatani, Y., Hoshino, T.
PDB entry 8jyk: Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 1)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2023-07-03
Authors: Yajima, H., Anraku, Y., Kita, S., Kimura, K., Sasaki, J., Sasaki-Tabata, K., Maenaka, K., Hashiguchi, T.
PDB entry 8jyl: Acyl-ACP Synthetase structure bound to C10-AMS
Classification: LIGASE
Source organism: Vibrio harveyi
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2023-07-03
Authors: Huang, H., Chang, S., Huang, M., Zhang, H., Zhou, C., Zhang, X., Feng, Y.
PDB entry 8jym: Structure of the SARS-CoV-2 XBB.1.5 spike glycoprotein (closed state 2)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-07-03
Authors: Yajima, H., Anraku, Y., Kita, S., Kimura, K., Sasaki, J., Sasaki-Tabata, K., Maenaka, K., Hashiguchi, T.
PDB entry 8jyn: Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (1-up state)
Classification: VIRAL PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-07-03
Authors: Yajima, H., Anraku, Y., Kita, S., Kimura, K., Sasaki, J., Sasaki-Tabata, K., Maenaka, K., Hashiguchi, T.
PDB entry 8jyo: Structure of SARS-CoV-2 XBB.1.5 spike glycoprotein in complex with ACE2 (2-up state)
Classification: VIRAL PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-07-03
Authors: Yajima, H., Anraku, Y., Kita, S., Kimura, K., Sasaki, J., Sasaki-Tabata, K., Maenaka, K., Hashiguchi, T.
PDB entry 8jyp: Structure of SARS-CoV-2 XBB.1.5 spike RBD in complex with ACE2
Classification: VIRAL PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2023-07-03
Authors: Yajima, H., Anraku, Y., Kita, S., Kimura, K., Sasaki, J., Sasaki-Tabata, K., Maenaka, K., Hashiguchi, T.
PDB entry 8jyq: Crystal structure of cancer-specific anti-HER2 antibody H2Mab-214 in complex with epitope peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-07-03
Authors: Arimori, T., Takagi, J.
PDB entry 8jyr: Crystal structure of anti-HER2 antibody H2Mab-119 in complex with HER2 domain I
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-07-03
Authors: Arimori, T., Takagi, J.
PDB entry 8jys: SARS-CoV-2 Spike RBD (dimer) in complex with two 2S-1244 nanobodies
Classification: VIRAL PROTEIN
Source organism: Camelus bactrianus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2023-07-03
Authors: Yang, Y., Zhang, C.H.
PDB entry 8jyt: Ancestral imine reducatase N560
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2023-07-03
Authors: Zhu, X.X.
PDB entry 8jyu: Acyl-ACP Synthetase structure bound to Decanoyl-AMP
Classification: LIGASE
Source organism: Vibrio harveyi
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2023-07-03
Authors: Huang, H., Chang, S., Huang, M., Zhang, H., Zhou, C., Zhang, X., Feng, Y.
PDB entry 8jyv: Crystal structure of the gasdermin from Trichoplax adhaerens
Classification: IMMUNE SYSTEM
Source organism: Trichoplax adhaerens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2023-07-04
Authors: Zeng, H., Hou, Y.J., Ding, J.
PDB entry 8jyw: Cryo-EM structure of the gasdermin pore from Trichoplax adhaerens
Classification: IMMUNE SYSTEM
Source organism: Trichoplax adhaerens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-07-04
Authors: Hou, Y.J., Sun, Q., Zeng, H., Ding, J.
PDB entry 8jyx: Crystal structure of the gasdermin-like protein RCD-1-1 from Neurospora crassa
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli; Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-07-04
Authors: Li, Y., Hou, Y.J., Ding, J.
PDB entry 8jyy: Crystal structure of the gasdermin-like protein RCD-1-2 from Neurospora crassa
Classification: IMMUNE SYSTEM
Source organism: Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-07-04
Authors: Li, Y., Hou, Y.J., Ding, J.
PDB entry 8jyz: Cryo-EM structure of RCD-1 pore from Neurospora crassa
Classification: IMMUNE SYSTEM
Source organism: Neurospora crassa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2023-07-04
Authors: Hou, Y.J., Sun, Q., Li, Y., Ding, J.
PDB entry 8jz0: Crystal structure of a single-chain monellin mutant C41A
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.229 Å
Deposited: 2023-07-04
Authors: Yasui, N., Ohnuma, K., Yamashita, A.
PDB entry 8jz1: Crystal structure of a single-chain monellin mutant C41V
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.239 Å
Deposited: 2023-07-04
Authors: Yasui, N., Ohnuma, K., Yamashita, A.
PDB entry 8jz2: Crystal structure of AetF in complex with FAD
Classification: FLAVOPROTEIN
Source organism: Aetokthonos hydrillicola Thurmond2011
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-07-04
Authors: Li, H., Dai, L., Chen, C.-C., Guo, R.-T.
PDB entry 8jz3: Crystal structure of AetF in complex with FAD and L-tryptophan
Classification: FLAVOPROTEIN
Source organism: Aetokthonos hydrillicola Thurmond2011
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-07-04
Authors: Li, H., Dai, L., Chen, C.-C., Guo, R.-T.
PDB entry 8jz4: Crystal structure of AetF in complex with FAD and 5-bromo-L-tryptophan
Classification: FLAVOPROTEIN
Source organism: Aetokthonos hydrillicola Thurmond2011
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2023-07-04
Authors: Li, H., Dai, L., Chen, C.-C., Guo, R.-T.
PDB entry 8jz5: Crystal structure of AetF in complex with FAD and NADP+ at 1.86 angstrom
Classification: FLAVOPROTEIN
Source organism: Aetokthonos hydrillicola Thurmond2011
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2023-07-04
Authors: Li, H., Dai, L., Chen, C.-C., Guo, R.-T.
PDB entry 8jz6: Crystal structure of AetF in complex with FAD and NADP+ at 2.66 angstrom
Classification: FLAVOPROTEIN
Source organism: Aetokthonos hydrillicola Thurmond2011
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2023-07-04
Authors: Li, H., Dai, L., Chen, C.-C., Guo, R.-T.
PDB entry 8jz7: Cryo-EM structure of MK-6892-bound HCAR2 in complex with Gi protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-07-04
Authors: Zhao, C., Tian, X.W., Liu, Y., Cheng, L., Yan, W., Shao, Z.H.
PDB entry 8jz8: Subatomic structure of orthorhombic thaumatin at 0.89 Angstroms
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 0.89 Å
Deposited: 2023-07-04
Authors: Masuda, T., Suzuki, M., Yamasaki, M., Mikami, B.
PDB entry 8jza: Crystal structure of single domain antibody kt75 of human Thyroglobulin
Classification: IMMUNE SYSTEM
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-07-04
Authors: Mistry, H., Kumarasamy, J., Kumari, S., Kulkarni, S.P., Gupta, G.D.
PDB entry 8jzb: Langya Henipavirus attachment protein
Classification: VIRAL PROTEIN
Source organism: Henipavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2023-07-05
Authors: Yan, R.H., Guo, Y.Y.
PDB entry 8jzc: Crystal structure of Geobacillus stearothermophilus NarJ
Classification: CHAPERONE
Source organism: Geobacillus stearothermophilus ATCC 7953
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-07-05
Authors: Song, W.S., Kim, J.H., Namgung, B., Cho, H.Y., Oh, H.B., Yoon, S.I.
PDB entry 8jzd: Crystal structure of Escherichia coli NarJ in complex with the signal peptide of E. coli NarG
Classification: CHAPERONE
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-07-05
Authors: Song, W.S., Kim, J.H., Namgung, B., Cho, H.Y., Oh, H.B., Yoon, S.I.
PDB entry 8jze: PSI-AcpPCI supercomplex from Symbiodinium
Classification: PHOTOSYNTHESIS
Source organism: Symbiodinium
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-07-05
Authors: Li, Z.H., Li, X.Y., Wang, W.D.
PDB entry 8jzf: PSI-AcpPCI supercomplex from Symbiodinium
Classification: PHOTOSYNTHESIS
Source organism: Symbiodinium
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-07-05
Authors: Li, X.Y., Li, Z.H., Wang, W.D.
PDB entry 8jzg: C. glutamicum S-adenosylmethionine synthase co-crystallized with Adenosine, triphosphate, and SAM
Classification: TRANSFERASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2023-07-05
Authors: Lee, S., Kim, K.J.
PDB entry 8jzh: C. glutamicum S-adenosylmethionine synthase
Classification: TRANSFERASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-07-05
Authors: Lee, S., Kim, K.J.
PDB entry 8jzi: Mutant S-adenosylmethionine synthase from C. glutamicum
Classification: TRANSFERASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-07-05
Authors: Lee, S., Kim, K.J.
PDB entry 8jzj: E.coli Glyceraldehyde-3-phosphate dehydrogenase structure under cryoprotect condition of ammonium sulfate
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-07-05
Authors: Jang, K., Hlaing, S.H.S., Kim, H.G., Kim, N., Choe, H.W., Kim, Y.J.
PDB entry 8jzk: Crystal structure of glutathione S-transferase Tau7 from Salix lindleyana in complex with GSH
Classification: TRANSFERASE
Source organism: Salix lindleyana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55004 Å
Deposited: 2023-07-05
Authors: Xu, N.
PDB entry 8jzl: CryoEM structure of the Salmonella effector inositol phosphate phosphatase SopB
Classification: LIPID BINDING PROTEIN
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2023-07-05
Authors: Jiang, W.X., Cheng, X.Q., Wu, M., Ma, L.X.
PDB entry 8jzm: The inhibitor of Toll-like receptor signaling o-vanillin binds covalently to MAL/TIRAP Lys-210
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-07-05
Authors: Rahaman, M.H., Jia, X., Maxwell, M.J., Mobli, M., Kobe, B.
PDB entry 8jzn: Structure of a fungal 1,3-beta-glucan synthase
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2023-07-05
Authors: Zhao, C., You, Z., Chen, D., Hang, J., Wang, Z., Meng, J., Wang, L., Zhao, P., Qiao, J., Yun, C., Bai, L.
PDB entry 8jzo: CryoEM structure of the NADP-dependent malic enzyme MaeB
Classification: LIPID BINDING PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-07-06
Authors: Jiang, W.X., Cheng, X.Q., Wu, M., Ma, L.X., Xing, Q.
PDB entry 8jzp: Structure of mouse C5a-human C5aR1-Go complex
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2023-07-06
Authors: Yadav, M.K., Yadav, R., Maharana, J., Sarma, P., Banerjee, R., Shukla, A.K., Gati, C.
PDB entry 8jzq: Crystal structure of Panax quinquefolius Pq3-O-UGT2
Classification: TRANSFERASE
Source organism: Panax quinquefolius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2023-07-06
Authors: Mei, K., Ji, Q., Liu, Y.
PDB entry 8jzr: Outward_facing SLC15A4 monomer
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-07-06
Authors: Zhang, S.S., Chen, X.D., Xie, M.
PDB entry 8jzs: Outward-facing SLC15A4 dimer
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-07-06
Authors: Zhang, S.S., Chen, X.D., Xie, M.
PDB entry 8jzt: The sigF and anti-sigma factor complex
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-07-06
Authors: Chen, Y.J., Su, D.
PDB entry 8jzu: SLC15A4_TASL complex
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-07-06
Authors: Zhang, S.S., Chen, X.D., Xie, M.
PDB entry 8jzv: RPA70N-ETAA1 fusion
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-07-06
Authors: Fu, W.M., Wu, Y.Y., Zhou, C.
PDB entry 8jzw: Cystal structure of HP1 in complex with TRIM66 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-07-06
Authors: Shen, S.Y., Li, F.D., Shi, Y.Y.
PDB entry 8jzx: SLC15A4 inhibitor complex
Classification: PROTEIN TRANSPORT/INHIBITOR
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-07-06
Authors: Zhang, S.S., Chen, X.D., Xie, M.
PDB entry 8jzy: RPA70N-RAD9 fusion
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-07-06
Authors: Fu, W.M., Wu, Y.Y., Zhou, C.
PDB entry 8jzz: Structure of human C5a-desArg bound human C5aR1 in complex with Go
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2023-07-06
Authors: Yadav, M.K., Yadav, R., Maharana, J., Sarma, P., Banerjee, R., Shukla, A.K., Gati, C.
PDB entry 8k00: RPA70N-MRE11 fusion
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-07-07
Authors: Fu, W.M., Wu, Y.Y., Zhou, C.
PDB entry 8k03: CryoEM structure of the transketolase ANIP from Streptomyces hygrospinosus
Classification: TRANSFERASE
Source organism: Streptomyces hygrospinosus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2023-07-07
Authors: Jiang, W.X., Ma, L.X., Xing, Q.
PDB entry 8k04: CryoEM structure of a 2,3-hydroxycinnamic acid 1,2-dioxygenase MhpB in apo form
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-07-07
Authors: Jiang, W.X., Cheng, X.Q., Ma, L.X., Xing, Q.
PDB entry 8k05: Pseudouridine 5'-monophosphate glycosylase from Arabidopsis thaliana -- sulfate bound holoenzyme
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-07-07
Authors: Lee, J.Y., Kim, S.H., Rhee, S.K.
PDB entry 8k06: Pseudouridine 5'-monophosphate glycosylase from Arabidopsis thaliana -- PSU, R5P bound K185A mutant
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.845 Å
Deposited: 2023-07-07
Authors: Lee, J.Y., Kim, S.H., Rhee, S.K.
PDB entry 8k07: Pseudouridine 5'-monophosphate glycosylase from Arabidopsis thaliana -- citrate bound K185A mutant
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.121 Å
Deposited: 2023-07-07
Authors: Lee, J.Y., Kim, S.H., Rhee, S.K.
PDB entry 8k08: Pq3-O-UGT2 with 20(S)-Ginsenoside Rh2
Classification: TRANSFERASE
Source organism: Panax quinquefolius
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-07-07
Authors: Ji, Q.S., Liu, Y.R., Mei, K.R.
PDB entry 8k09: Pq3-O-UGT2 with 20(S)-Ginsenoside F2
Classification: TRANSFERASE
Source organism: Panax quinquefolius
Experimental method: X-RAY DIFFRACTION
Resolution: 3.36 Å
Deposited: 2023-07-07
Authors: Mei, K.R., Ji, Q.S., Liu, Y.R.
PDB entry 8k0a: CryoEM structure of 3-phenylpropionate/cinnamic acid dioxygenase HcaE-HcaF complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-07-07
Authors: Jiang, W.X., Cheng, X.Q., Ma, L.X., Xing, Q.
PDB entry 8k0b: Cryo-EM structure of TMEM63C
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2023-07-08
Authors: Qin, Y., Yu, D., Dong, J., Dang, S.
PDB entry 8k0c: Cryo-EM structure of conformation 1 of complex of Nipah virus attachment glycoprotein G with 1E5 neutralizing antibody
Classification: VIRAL PROTEIN
Source organism: Macaca mulatta; Nipah virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2023-07-08
Authors: Sun, M.M.
PDB entry 8k0d: Cryo-EM structure of conformation 2 of complex of Nipah virus attachment G with 1E5 neutralizing antibody
Classification: VIRAL PROTEIN
Source organism: Macaca mulatta; Nipah virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-07-08
Authors: Sun, M.
PDB entry 8k0e: Human collagen prolyl processing enzyme complex, P3H1/CRTAP heterodimer
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2023-07-08
Authors: Li, W., Peng, J., Yao, D., Rao, B., Xia, Y., Wang, Q., Li, S., Cao, M., Shen, Y., Ma, P., Liao, R., Qin, A., Zhao, J., Cao, Y.
PDB entry 8k0f: Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, in its apo state
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2023-07-08
Authors: Li, W., Peng, J., Yao, D., Rao, B., Xia, Y., Wang, Q., Li, S., Cao, M., Shen, Y., Ma, P., Liao, R., Qin, A., Zhao, J., Cao, Y.
PDB entry 8k0g: Cryo-EM structure of human 26S RP (Ed state) bound to K11/K48-branched ubiquitin (Ub) chain composed of four Ub.
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-07-09
Authors: Hsu, S.T.D., Draczkowski, P., Wang, Y.S.
PDB entry 8k0h: Structure of Cas5f-8f
Classification: RNA BINDING PROTEIN
Source organism: Vibrio phage ICP1_2011_A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2023-07-09
Authors: Feng, Y., Wang, H.
PDB entry 8k0i: Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, in its dual-ternary state
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2023-07-09
Authors: Li, W., Peng, J., Yao, D., Rao, B., Xia, Y., Wang, Q., Li, S., Cao, M., Shen, Y., Ma, P., Liao, R., Qin, A., Zhao, J., Cao, Y.
PDB entry 8k0j: Crystal structure of Cas7f
Classification: RNA BINDING PROTEIN
Source organism: Vibrio phage ICP1_2011_A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.365 Å
Deposited: 2023-07-09
Authors: Feng, Y., Wang, H.
PDB entry 8k0k: Crystal structure of Csy complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Vibrio phage ICP1_2011_A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.995 Å
Deposited: 2023-07-09
Authors: Feng, Y., Wang, H.
PDB entry 8k0m: Human collagen prolyl processing enzyme complex, P3H1/CRTAP/PPIB heterotrimer, bound to 2-oxoglutarate
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-07-09
Authors: Li, W., Peng, J., Yao, D., Rao, B., Xia, Y., Wang, Q., Li, S., Cao, M., Shen, Y., Ma, P., Liao, R., Qin, A., Zhao, J., Cao, Y.
PDB entry 8k0o: High resolution structure of Dehydroascorbate Reductase from Cenchrus Americanus in complex with Acetate in the G-site and Glycerol in the H-site
Classification: OXIDOREDUCTASE
Source organism: Cenchrus americanus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-07-10
Authors: Khan, W.A., Arulandu, A.
PDB entry 8k0p: The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric apo state
Classification: RNA
Source organism: Anoxybacillus pushchinoensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-07-10
Authors: Zhu, H.Z., Liu, J.J.G.
PDB entry 8k0q: The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric pre-cleavage state
Classification: RNA
Source organism: Anoxybacillus pushchinoensis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2023-07-10
Authors: Zhu, H.Z., Liu, J.J.G.
PDB entry 8k0r: The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric post cleavge state
Classification: RNA
Source organism: Anoxybacillus pushchinoensis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2023-07-10
Authors: Zhu, H.Z., Liu, J.J.G.
PDB entry 8k0s: The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 with 10-nt TRS at symmetric apo state
Classification: RNA
Source organism: Anoxybacillus pushchinoensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2023-07-10
Authors: Zhu, H.Z., Liu, J.J.G.
PDB entry 8k0t: Crystal structure of theophylline DNA aptamer bound to theophylline
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-07-10
Authors: Huang, Y., Lin, X., Huang, L.