LiteFold/PDB huggingface dataset:
PDB entry 8vv3: Structure of the insect gustatory receptor Gr9 from Bombyx mori in complex with L-sorbose
Classification: TRANSPORT PROTEIN
Source organism: Bombyx mori
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-01-30
Authors: Gomes, J.V., Butterwick, J.A.
PDB entry 8vv4: E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-01-30
Authors: Kimbrough, E.M., Dunham, C.M., Nguyen, H.A.
PDB entry 8vv5: The crystal structure of Brucella abortus FtrA
Classification: METAL BINDING PROTEIN
Source organism: Brucella abortus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2024-01-30
Authors: Roy, S., Garcia, B.L.
PDB entry 8vv6: The crystal structure of Brucella abortus FtrA-H151A mutant
Classification: METAL BINDING PROTEIN
Source organism: Brucella abortus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-01-30
Authors: Roy, S., Garcia, B.L.
PDB entry 8vv8: Crystal Structure of EHMT2 bound to EZM8266
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-01-30
Authors: Cocozaki, A., Farrow, N.A.
PDB entry 8vva: Structure of DUF1480 domain-containing protein from Klebsiella pneumoniae subsp. pneumoniae SA1
Classification: UNKNOWN FUNCTION
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-01-30
Authors: Semper, C., Savchenko, A., Watanabe, N., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8vvb: Influenza antibody L5A7 Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-01-30
Authors: Harris, D.R., Olia, A.S., Kwong, P.D.
PDB entry 8vvc: Cryo-EM structure of human ABC transporter (hABCC1) with nucleotide-binding domain 2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.32 Å
Deposited: 2024-01-30
Authors: Shinde, O., Li, P.
PDB entry 8vvd: Cryo-EM Structure of DHX36 bound to a RNA G-quadruplex derived from the cMyc G-quadruplex, Class 2
Classification: MOTOR PROTEIN/RNA
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-01-30
Authors: Banco, M.T., Ferre-D'Amare, A.R.
PDB entry 8vve: Kappa opioid receptor:Galphai protein in complex with inverse agonist norBNI
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-31
Authors: Gati, C., Motiwala, Z., Tyson, A.S., Styrpejko, D., Han, G.W., Khan, S., Ramos-Gonzalez, N., Shenvi, R., Majumdar, S.
PDB entry 8vvf: Kappa opioid receptor:Galphai protein in complex with inverse agonist JDTic
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-01-31
Authors: Gati, C., Motiwala, Z., Tyson, A.S., Styrpejko, D., Han, G.W., Khan, S., Ramos-Gonzalez, N., Shenvi, R., Majumdar, S.
PDB entry 8vvg: Kappa opioid receptor in complex with heterotrimerig Gi protein, bound to inverse agonist GB18
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-01-31
Authors: Gati, C., Motiwala, Z., Tyson, A.S., Styrpejko, D., Han, G.W., Khan, S., Ramos-Gonzalez, N., Shenvi, R., Majumdar, S.
PDB entry 8vvh: rat GluN1a-2B Fab 003-102 local refinement
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2024-01-31
Authors: Michalski, K., Furukawa, H.
PDB entry 8vvi: Cryo-EM structure of a type II ZorAB complex from Sulfuricurvum kujiense
Classification: MEMBRANE PROTEIN
Source organism: Sulfuricurvum kujiense DSM 16994
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-01-31
Authors: Deme, J.C., Lea, S.M.
PDB entry 8vvj: Structure of S. odontolytica ZTP riboswitch bound to m-1-pyridinyl-AICA
Classification: RNA
Source organism: Schaalia odontolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-01-31
Authors: Jones, C.P., Ferre D'Amare, A.R.
PDB entry 8vvk: CCHFV GP38 bound to ADI-46143 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Crimean-Congo hemorrhagic fever virus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2024-01-31
Authors: Hjorth, C.K., McLellan, J.S.
PDB entry 8vvl: CCHFV GP38 bound to c13G8 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Crimean-Congo hemorrhagic fever virus; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-01-31
Authors: Hjorth, C.K., Mishra, A.K., McLellan, J.S.
PDB entry 8vvm: Structure of FabS1CE1-EPR1-1 in complex with the erythropoietin receptor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-01-31
Authors: Singer, A.U., Bruce, H.A., Pavlenco, A., Ploder, L., Luu, G., Blazer, L., Adams, J.J., Sidhu, S.S.
PDB entry 8vvn: Cryo-EM structure of a type I ZorAB complex from Shewanella sp. strain ANA-3
Classification: MEMBRANE PROTEIN
Source organism: Shewanella sp. ANA-3
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-01-31
Authors: Deme, J.C., Lea, S.M.
PDB entry 8vvo: Structure of FabS1CE2-EPR1-1 in complex with the erythropoietin receptor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2024-01-31
Authors: Singer, A.U., Bruce, H.A., Pavlenco, A., Ploder, L., Luu, G., Blazer, L., Adams, J.J., Sidhu, S.S.
PDB entry 8vvp: Codon sampling state obtained from Anisomycin-treated mammalian ribosomes
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Bos taurus; Lampyridae; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-01-31
Authors: Loerch, S., Petrossian, E., Smith, P.R., Campbell, Z.T.
PDB entry 8vvq: Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Bos taurus; Lampyridae; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-01-31
Authors: Loerch, S., Petrossian, E., Smith, P.R., Campbell, Z.T.
PDB entry 8vvr: Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Bos taurus; Lampyridae; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-31
Authors: Loerch, S., Petrossian, E., Smith, P.R., Campbell, Z.T.
PDB entry 8vvs: Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Bos taurus; Lampyridae; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-31
Authors: Loerch, S., Petrossian, E., Smith, P.R., Campbell, Z.T.
PDB entry 8vvt: Mammalian ribosomes bound to Anisomycin in the rotated conformation
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-01-31
Authors: Loerch, S., Petrossian, E., Smith, P.R., Campbell, Z.T.
PDB entry 8vvu: Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Bos taurus; Lampyridae; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-01-31
Authors: Loerch, S., Petrossian, E., Smith, P.R., Campbell, Z.T.
PDB entry 8vvv: Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-01-31
Authors: Loerch, S., Petrossian, E., Smith, P.R., Campbell, Z.T.
PDB entry 8vvw: Structure of the five-fold capsomer of the Drosophila retrotransposon Copia capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-01-31
Authors: Liu, Y., Kelch, B.A.
PDB entry 8vvx: Human Aquaporin 2 from 2D electron diffraction data
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.6 Å
Deposited: 2024-01-31
Authors: Vahedi-Faridi, A., Lodowski, D.T., Engel, A., Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS)
PDB entry 8vvy: Human Cullin-1 in complex with CAND2
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-01-31
Authors: Kenny, S., Liu, X., Das, C.
PDB entry 8vvz: Structure of the three-fold capsomer of the Drosophila retrotransposon Copia capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2024-01-31
Authors: Liu, Y., Kelch, B.A.
PDB entry 8vw0: Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (AMP bound)
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8vw1: Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (ADP bound)
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-01-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8vw2: Crystal Structure of Apo UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli (ATP bound)
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-01-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8vw3: Structure of the non-symmetric capsomer of the Drosophila retrotransposon Copia capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2024-01-31
Authors: Liu, Y., Kelch, B.A.
PDB entry 8vw4: Crystal structure of Cbl-b TKB bound to compound 26
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-01-31
Authors: Yu, C., Murray, J., Hsu, P.L.
PDB entry 8vw5: Crystal structure of Cbl-b TKB bound to compound 2
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-01-31
Authors: Yu, C., Murray, J., Hsu, P.L.
PDB entry 8vw6: Crystal structure of SsuD
Classification: FLAVOPROTEIN
Source organism: Rhodococcus jostii RHA1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.606 Å
Deposited: 2024-01-31
Authors: Caputo, A.T., Hu, M., Scott, C.
PDB entry 8vw7: UIC-11-BPE-AgNO3 silver binding with UIC-11-BPE
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-01-31
Authors: Ganatra, P.
PDB entry 8vw8: UIC-13-BPE-AgNO3 silver binding with UIC-13-BPE
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-01-31
Authors: Ganatra, P.
PDB entry 8vw9: CryoEM Structure of a FtsH Helical Assembly in the Presence of ATP
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-01-31
Authors: Li, Y., Zhu, J., Zhang, Z., Wang, F., Egelman, E.H., Tezcan, F.A.
PDB entry 8vwa: CryoEM Structure of a FtsH Helical Assembly in the Presence of ATP
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-01-31
Authors: Li, Y., Zhu, J., Zhang, Z., Wang, F., Egelman, E.H., Tezcan, F.A.
PDB entry 8vwb: CryoEM Structure of a FtsH Helical Assembly in the Aged State
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-01-31
Authors: Li, Y., Zhu, J., Zhang, Z., Wang, F., Egelman, E.H., Tezcan, F.A.
PDB entry 8vwc: CryoEM Structure of a FtsH Helical Assembly in the Aged State
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-01-31
Authors: Li, Y., Zhu, J., Zhang, Z., Wang, F., Egelman, E.H., Tezcan, F.A.
PDB entry 8vwe: HIV-1 neutralizing antibody D5_AR bound to HIV-1 gp41 coiled-coil pocket IQN17
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-02-01
Authors: Filsinger Interrante, M.V., Tang, S., Fernandez, D., Kim, P.S.
PDB entry 8vwg: Structure of the Drosophila retrotransposon Copia capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2024-02-01
Authors: Liu, Y., Kelch, B.A.
PDB entry 8vwh: Structure of the baculovirus major nucleocapsid protein VP39 (localised reconstruction)
Classification: VIRAL PROTEIN
Source organism: Autographa californica multiple nucleopolyhedrovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-02-01
Authors: Johnstone, B.A., Hardy, J.M., Ha, J.H., Venugopal, H., Coulibaly, F.
PDB entry 8vwi: The base complex of the AcMNPV baculovirus nucleocapsid (Class 1, localised reconstruction)
Classification: VIRAL PROTEIN
Source organism: Autographa californica multiple nucleopolyhedrovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.71 Å
Deposited: 2024-02-01
Authors: Johnstone, B.A., Koszalka, P., Ha, J., Venugopal, H., Coulibaly, F.
PDB entry 8vwj: The base complex of the AcMNPV baculovirus nucleocapsid (Class 2, localised reconstruction)
Classification: VIRAL PROTEIN
Source organism: Autographa californica multiple nucleopolyhedrovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.78 Å
Deposited: 2024-02-01
Authors: Johnstone, B.A., Koszalka, P., Ha, J., Venugopal, H., Coulibaly, F.
PDB entry 8vwk: Crystal Structure of a fatty acid decarboxylase from Kocuria marina in complex with myristic acid
Classification: OXIDOREDUCTASE
Source organism: Kocuria marina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-01
Authors: Generoso, W.C., Miyamoto, R.Y., Murakami, M.T., Zanphorlin, L.M.
PDB entry 8vwl: Crystal structure of Vibrio cholerae NFeoB in the apo form
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.67 Å
Deposited: 2024-02-01
Authors: Lee, M., Smith, A.T.
PDB entry 8vwm: A structural study of selectivity mechanisms for JNK3 and p38 alpha with indazole scaffold probing compounds
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-02-01
Authors: Park, H., Feng, Y.
PDB entry 8vwn: Crystal structure of Vibrio cholerae NFeoB in the GDP-bound form
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 4.25 Å
Deposited: 2024-02-01
Authors: Lee, M., Smith, A.T.
PDB entry 8vwo: Crystal structure of hRpn13 Pru bound with U-shaped peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-01
Authors: Chandravanshi, M., Walters, K.J.
PDB entry 8vwp: Langya Virus attachment (G) glycoprotein with K85L/L86K mutation
Classification: VIRAL PROTEIN
Source organism: Langya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2024-02-02
Authors: Gibson, C.G., McCallum, M.M., Veesler, D.V., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8vwq: E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-02
Authors: Kimbrough, E.M., Dunham, C.M., Nguyen, H.A.
PDB entry 8vwr: Structure of steroid hydratase from Comamonas testosteroni
Classification: LYASE
Source organism: Comamonas testosteroni KF-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-02
Authors: Schroeter, K.L., Forrester, T.J.B., Kimber, M.S., Seah, S.Y.K.
PDB entry 8vws: Nucleosome containing 8oxoG at SHL-6
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-02
Authors: Weaver, T.M., Ling, J.A., Freudenthal, B.D.
PDB entry 8vwt: OGG1 bound to a nucleosome containing 8oxoG at SHL-6 (composite map)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-02-02
Authors: Weaver, T.M., Ling, J.A., Freudenthal, B.D.
PDB entry 8vwu: Nucleosome containing 8oxoG at SHL4
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-02-02
Authors: Weaver, T.M., Ling, J.A., Freudenthal, B.D.
PDB entry 8vwv: OGG1 bound to a nucleosome containing 8oxoG at SHL4 (composite map)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-02-02
Authors: Weaver, T.M., Ling, J.A., Freudenthal, B.D.
PDB entry 8vww: CCHFV GP38 bound to ADI-46152 and ADI-58048 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Crimean-Congo hemorrhagic fever virus strain IbAr10200; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-02-02
Authors: Hjorth, C.K., McLellan, J.S.
PDB entry 8vwx: Human Bcl-2 (G101V Mutant)/Bcl-xL Chimera Fused to Maltose-Binding Protein
Classification: APOPTOSIS
Source organism: Escherichia coli (strain K12); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-02-02
Authors: Baird, J., Holliday, M.
PDB entry 8vwy: Complex structure of mouse C1ql3 with BAI3
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-02-02
Authors: Miao, Y., Sudhof, T.C.
PDB entry 8vwz: Human Bcl-2 (G101V Mutant)/Bcl-xL Chimera Fused to MBP in Complex with Inhibitor S55746
Classification: APOPTOSIS
Source organism: Escherichia coli K-12; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2024-02-02
Authors: Baird, J., Holliday, M.
PDB entry 8vx0: CRYSTAL STRUCTURE OF CYP2C9*14 IN COMPLEX WITH LOSARTAN
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2024-02-02
Authors: Shah, M.B.
PDB entry 8vx1: Cryo-EM Structure of DHX36 bound to the cMyc DNA G-quadruplex, Class 2
Classification: MOTOR PROTEIN
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-02-02
Authors: Banco, M.T., Ferre-D'Amare, A.R.
PDB entry 8vx3: Structure of an exported small alarmone synthetase from Streptomyces albidoflavus
Classification: TRANSFERASE
Source organism: Streptomyces albidoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-02-03
Authors: Ahmad, S., Tsang, K.K., Schiefer, V., Kim, Y., Whitney, J.C.
PDB entry 8vx4: Human OGG1 bound to a 35-bp DNA with an 8-oxoG in the middle
Classification: HYDROLASE, LYASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-02-03
Authors: You, Q., Li, H.
PDB entry 8vx5: Nucleosome core particle containing an 8-oxoG damage site
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-02-03
Authors: You, Q., Li, H.
PDB entry 8vx6: Human OGG1 bound at the nucleosomal DNA entry site
Classification: HYDROLASE, LYASE/STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-02-03
Authors: You, Q., Li, H.
PDB entry 8vx7: Computationally designed tunable C2 symmetric tandem repeat homodimer, bound to cyclic peptide
Classification: DE NOVO PROTEIN
Source organism: synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-02-03
Authors: Kennedy, M.A., Stoddard, B.L., Said, M.
PDB entry 8vx8: Cryo-EM Structure of DHX36 bound to the cMyc DNA G-quadruplex, Class 1
Classification: MOTOR PROTEIN
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-02-03
Authors: Banco, M.T., Ferre-D'Amare, A.R.
PDB entry 8vx9: Structure of HamAB apo complex from the Escherichia coli Hachiman defense system
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-02-03
Authors: Tuck, O.T., Doudna, J.A.
PDB entry 8vxa: Structure of HamB-DNA complex, conformation 1, from the Escherichia coli Hachiman defense system
Classification: IMMUNE SYSTEM/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-02-03
Authors: Tuck, O.T., Doudna, J.A.
PDB entry 8vxb: Structure of ANT(6)-Ib from Campylobacter fetus subsp fetus complexed with hydrated streptomycin
Classification: TRANSFERASE
Source organism: Campylobacter fetus subsp. fetus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-04
Authors: Nalam, P., Cook, P., Smith, B.
PDB entry 8vxc: Structure of HamB-DNA complex, conformation 2, from the Escherichia coli Hachiman defense system
Classification: IMMUNE SYSTEM/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-02-04
Authors: Tuck, O.T., Doudna, J.A.
PDB entry 8vxd: Structure of Casein kinase I isoform delta (CK1d) complexed with inhibitor 7
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2024-02-04
Authors: Thompson, A.A., Milligan, C.M., Sharma, S.
PDB entry 8vxe: Structure of p38 alpha (Mitogen-activated protein kinase 14) complexed with inhibitor 6
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-04
Authors: Blaesse, M., Steinbacher, S., Shaffer, P.L., Sharma, S., Thompson, A.A.
PDB entry 8vxf: Structure of Casein kinase I isoform delta (CK1d) complexed with inhibitor 15
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-02-04
Authors: Thompson, A.A., Milligan, C.M., Sharma, S.
PDB entry 8vxg: The crystal structure of CYP125MRCA, an ancestrally reconstructed CYP125 enzyme
Classification: LIPID BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-02-04
Authors: Doherty, D.Z., Bruning, J.B., Bell, S.G.
PDB entry 8vxh: Cryo-EM Structure of the Glycosyltransferase ArnC from Salmonella enterica in the Apo State Determined on Talos Arctica microscope
Classification: TRANSFERASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2024-02-04
Authors: Ashraf, K.U., Punetha, A., Petrou, V.I.
PDB entry 8vxi: The crystal structure of sitosterol-bound CYP125MRCA
Classification: LIPID BINDING PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.057 Å
Deposited: 2024-02-04
Authors: Doherty, D.Z., Bell, S.G.
PDB entry 8vxj: The crystal structure of human apolipoprotein A-I in complex with Fab 55201
Classification: LIPID TRANSPORT/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-02-04
Authors: Tou, H.I., Metcalfe, R.D., Khandokar, Y., Griffin, M.D.W.
PDB entry 8vxk: Crystal Structure of the Apo Bacillus subtilis GabR C-terminal Effector-binding and Oligomerization Domain
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-05
Authors: Kaley, N.E., Liu, D.
PDB entry 8vxl: Crystal Structure of the External Aldimine Complex of Pyridoxal-5'-Tetrazole and (S)-4-amino-5-phenoxypentanoate with the Bacillus subtilis GabR C-terminal Effector-binding and Oligomerization Domain
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2024-02-05
Authors: Kaley, N.E., Liveris, Z.J., Becker, D.P., Liu, D.
PDB entry 8vxm: Human Bcl-2/Bcl-xL Chimera Fused to MBP in Complex with Inhibitor S55746
Classification: APOPTOSIS
Source organism: Escherichia coli K-12; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-02-05
Authors: Baird, J., Holliday, M.
PDB entry 8vxn: Human Bcl-2/Bcl-xL Chimera Fused to Maltose-Binding Protein
Classification: APOPTOSIS
Source organism: Escherichia coli (strain K12); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-02-05
Authors: Baird, J., Holliday, M.
PDB entry 8vxq: Cryo-EM structure of phage DEV ejection proteins gp72:gp73
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage vB_PaeP_DEV
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-05
Authors: Iglesias, S.M., Cingolani, G.
PDB entry 8vxs: UIC-15-BPE extension of UIC-1
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-02-06
Authors: Ganatra, P.
PDB entry 8vxt: Cryo-EM structure of mammalian Thorase filament, 3-layer refinement
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.25 Å
Deposited: 2024-02-06
Authors: Dar, M.A., Louder, R.K., Umanah, G.K., Dawson, T.M., Dawson, V.L.
PDB entry 8vxu: Crystal structure of Gdx-Clo A60T from Small Multidrug Resistance family of transporters in complex with cetyltrimetylammonium
Classification: TRANSPORT PROTEIN
Source organism: Clostridia bacterium; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2024-02-06
Authors: Burata, O.E., Stockbridge, R.B.
PDB entry 8vxv: HIV-1 R18L CA hexamer
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-02-06
Authors: Schirra, R.T., Pornillos, O., Ganser-Pornillos, B.K.
PDB entry 8vxw: HIV-1 R18L CA pentamer from capsid-like particles assembled in 1 M NaCl
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2024-02-06
Authors: Schirra, R.T., Pornillos, O., Ganser-Pornillos, B.K.
PDB entry 8vxx: Mango II bound to 365A-061
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-02-06
Authors: Passalacqua, L.F.M., Ferre-D'Amare, A.R., Schneekloth, J.S.
PDB entry 8vxy: Structure of HamA(E138A,K140A)B-plasmid DNA complex from the Escherichia coli Hachiman defense system
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2024-02-06
Authors: Tuck, O.T., Hu, J.J., Doudna, J.A.
PDB entry 8vxz: Mango II bound to 365A-084
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-02-06
Authors: Passalacqua, L.F.M., Ferre-D'Amare, A.R., Schneekloth, J.S.
PDB entry 8vy0: Mango II bound to 365A-087
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-02-06
Authors: Passalacqua, L.F.M., Ferre-D'Amare, A.R., Schneekloth, J.S.
PDB entry 8vy1: Mango II bound to 365A-088
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-02-06
Authors: Passalacqua, L.F.M., Ferre-D'Amare, A.R., Schneekloth, J.S.
PDB entry 8vy2: Structure of mCELSR1 extracellular region containing CADH9-GAIN domains
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-02-06
Authors: Bandekar, S.J., Arac, D.
PDB entry 8vy3: Human DNA polymerase alpha/primase - AavLEA1 (1:40 molar ratio)
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-02-06
Authors: Abe, K.M., Li, G., Grant, T., Lim, C.J.
PDB entry 8vy4: Engineering a Tumor-Selective Prodrug T Cell Engager Bispecific Antibody for Safer Immunotherapy
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-02-06
Authors: Antonysamy, S., Demarest, S., Froning, K., Hickey, M.H., Kuhlman, B., McCue, A.C.
PDB entry 8vy5: Crystal structure of human SAE1
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2024-02-07
Authors: Huang, X., Qian, J., Yang, Y.
PDB entry 8vy6: Murine light chain dimer
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-02-07
Authors: Kapingidza, A.B., Dolamore, C., Hyduke, N.P., Easly, W., Chivv, C., Pomes, A., Chruszcz, M.
PDB entry 8vy7: CryoEM structure of Gi-coupled TAS2R14 with cholesterol and an intracellular tastant
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-02-07
Authors: Kim, Y., Gumpper, R.H., Roth, B.L.
PDB entry 8vy8: Recombinant alpha bungarotoxin complexed with HAP peptide
Classification: TOXIN
Source organism: Bungarus multicinctus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-02-07
Authors: Xu, J., Lei, X., Chen, L.
PDB entry 8vy9: CryoEM structure of Ggust-coupled TAS2R14 with cholesterol and an intracellular tastant
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-02-07
Authors: Kim, Y., Gumpper, R.H., Roth, B.L.
PDB entry 8vya: SARS-CoV-2 Omicron Variant Spike Glycoprotein Fusion Core (Q954H)
Classification: VIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2024-02-07
Authors: Outlaw, V.K., Apurba, R., Vithanage, N.
PDB entry 8vyb: Cryo-EM structure of human core Rab3GAP1/2 complex
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-02-07
Authors: Nguyen, K.M., Yip, C.K.
PDB entry 8vyc: Graspetide pre-fuscimiditide A1C/T3C variant
Classification: UNKNOWN FUNCTION
Source organism: Thermobifida fusca YX
Experimental method: SOLUTION NMR
Deposited: 2024-02-08
Authors: Link, A.J., Choi, B.
PDB entry 8vyd: A novel synthase generates m4(2)C to stabilize the archaeal ribosome
Classification: RNA BINDING PROTEIN
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-02-08
Authors: Ho, P.S., Santangelo, T.J., Fluke, K.
PDB entry 8vye: SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-02-08
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8vyf: SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-02-08
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8vyg: SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-08
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8vyh: Crystal Structure Analysis of PARP1 in complex with a compound
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-08
Authors: Seo, H.-S., Dhe-Paganon, S., Arthanari, H.
PDB entry 8vyj: Structure of full-length human cardiac sodium channel - Class-I.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-02-08
Authors: Biswas, R., Chinthalapudi, K.
PDB entry 8vyk: Structure of full-length human cardiac sodium channel - Class-II.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-02-08
Authors: Biswas, R., Chinthalapudi, K.
PDB entry 8vyl: The structure of Human Hemoglobin in Complex with Nanobody BtNbE11
Classification: OXYGEN TRANSPORT
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-02-08
Authors: Grinter, R., Binks, S., Fox, D.
PDB entry 8vym: Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) in the postfusion conformation in complex with 1G2 and 7H3 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human betaherpesvirus 5
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-02-09
Authors: Sponholtz, M.R., Byrne, P.O., McLellan, J.S.
PDB entry 8vyn: Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, composite map (global and local) and model
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human betaherpesvirus 5
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-02-09
Authors: Sponholtz, M.R., Byrne, P.O., McLellan, J.S.
PDB entry 8vyo: Cryo-EM Structure of the BRAF WT monomer
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2024-02-09
Authors: Lavoie, H., Lajoie, D., Jin, T., Decossas, M., Maisonneuve, P., Therrien, M.
PDB entry 8vyp: Cryo-EM Structure of the BRAF V600E monomer
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-02-09
Authors: Lavoie, H., Lajoie, D., Jin, T., Decossas, M., Maisonneuve, P., Therrien, M.
PDB entry 8vyq: Cryo-EM Structure of the BRAF V600K monomer
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.43 Å
Deposited: 2024-02-09
Authors: Lavoie, H., Lajoie, D., Jin, T., Decossas, M., Maisonneuve, P., Therrien, M.
PDB entry 8vyr: Cryo-EM Structure of the BRAF V600E monomer bound to GDC0879
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.32 Å
Deposited: 2024-02-09
Authors: Lavoie, H., Lajoie, D., Jin, T., Decossas, M., Maisonneuve, P., Therrien, M.
PDB entry 8vys: Cryo-EM Structure of the BRAF V600E monomer bound to PLX8394
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-02-09
Authors: Lavoie, H., Lajoie, D., Jin, T., Decossas, M., Maisonneuve, P., Therrien, M.
PDB entry 8vyt: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with k-411
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-02-09
Authors: Min, C.K., Nwachukwu, J.C., Hou, Y., Russo, R.J., Papa, A., Min, J., Peng, R., Kim, S.H., Ziegler, Y., Rangarajan, E.S., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 8vyu: Cryo-EM Structure of the BRAF WT monomer bound to PLX8394
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2024-02-09
Authors: Lavoie, H., Lajoie, D., Jin, T., Decossas, M., Maisonneuve, P., Therrien, M.
PDB entry 8vyv: Cryo-EM Structure of the BRAF K601E monomer
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.86 Å
Deposited: 2024-02-09
Authors: Lavoie, H., Lajoie, D., Jin, T., Decossas, M., Maisonneuve, P., Therrien, M.
PDB entry 8vyw: Cryo-EM Structure of the BRAF D594G monomer
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.76 Å
Deposited: 2024-02-09
Authors: Lavoie, H., Lajoie, D., Jin, T., Decossas, M., Maisonneuve, P., Therrien, M.
PDB entry 8vyx: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with k-410
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2024-02-09
Authors: Min, C.K., Nwachukwu, J.C., Hou, Y., Russo, R.J., Papa, A., Min, J., Peng, R., Kim, S.H., Ziegler, Y., Rangarajan, E.S., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 8vyy: The crystal structure of MarE in complex with its native substrate, beta-methyl-L-tryptophan
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-02-09
Authors: Shin, I., Liu, A.
PDB entry 8vz0: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with k-400
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-02-09
Authors: Min, C.K., Nwachukwu, J.C., Hou, Y., Russo, R.J., Papa, A., Min, J., Peng, R., Kim, S.H., Ziegler, Y., Rangarajan, E.S., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 8vz1: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with k-409
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2024-02-09
Authors: Min, C.K., Nwachukwu, J.C., Hou, Y., Russo, R.J., Papa, A., Min, J., Peng, R., Kim, S.H., Ziegler, Y., Rangarajan, E.S., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 8vz3: Structure of human PIN1 covalently derivatized with SuFEx compound
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-02-09
Authors: Louie, G.V., Noel, J.P., Wang, W.-M., Kelly, J.W.
PDB entry 8vz4: L54G Mutant of E. coli Dihydrofolate Reductase Complexed with Nicotinamide Adenine Dinucleotide Phosphate (oxidized form)
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-02-09
Authors: Fried, S.D.E., Boxer, S.G.
PDB entry 8vz5: Structure of human PIN1 covalently derivatized with SuFEx compound
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-02-09
Authors: Louie, G.V., Noel, J.P., Wang, W.-M., Kelly, J.W.
PDB entry 8vz6: PbAbiF dimer bound to ncRNA
Classification: TOXIN/RNA
Source organism: uncultured Prevotellaceae bacterium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2024-02-10
Authors: Wilkinson, M.E., Zilberzwige-Tal, S., Altae-Tran, H., Zhang, F.
PDB entry 8vz7: Crystal Structure of Human Cytochrome P450 2C9*27 (R150L) Genetic Variant in Complex with the Drug Losartan
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2024-02-11
Authors: Shah, M.B.
PDB entry 8vz8: Crystal structure of mouse MAIT M2B TCR-MR1-5-OP-RU complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2024-02-11
Authors: Ciacchi, L., Rossjohn, J., Awad, W.
PDB entry 8vz9: Crystal structure of mouse MAIT M2A TCR-MR1-5-OP-RU complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2024-02-11
Authors: Ciacchi, L., Rossjohn, J., Awad, W.
PDB entry 8vza: Crystal Structure of 2-Hydroxacyl-CoA Lyase/Synthase ApbHACS from Alphaproteobacteria bacterium in the Complex with THDP, L-Lactyl-CoA, and ADP
Classification: LYASE
Source organism: Alphaproteobacteria bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-11
Authors: Gade, P., Kim, Y., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vzb: Crystal Structure of 2-Hydroxacyl-CoA Lyase/Synthase ApbHACS from Alphaproteobacteria bacterium in the Complex with THDP, D-Lactyl-CoA, and ADP
Classification: LYASE
Source organism: Alphaproteobacteria bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-02-11
Authors: Gade, P., Kim, Y., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vzc: Crystal Structure of 2-Hydroxyacyl-CoA Lyase/Synthse ApbHACS from Alphaproteobacteria bacterium in the Complex with THDP, Formyl-CoA, and ADP
Classification: LYASE
Source organism: Alphaproteobacteria bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-02-11
Authors: Gade, P., Kim, Y., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vzd: Crystal Structure of 2-Hydroxyacyl-CoA lyase/synthase TbHACS from Thermoflexaceae bacterium in the Complex with THDP, Formyl-CoA and ADP
Classification: LYASE
Source organism: Thermoflexaceae bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-02-11
Authors: Kim, Y., Maltseva, M., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vze: Crystal Structure of 2-Hydroxyacyl-CoA lyase/synthase TbHACS from Thermoflexaceae bacterium in the Complex with THDP, 2-Hydroxyisobutyryl-CoA and ADP
Classification: LYASE
Source organism: Thermoflexaceae bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2024-02-11
Authors: Kim, Y., Maltseva, M., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vzf: Crystal Structure of 2-Hydroxyacyl-CoA Lyase/Synthase ApbHACS from Alphaproteobacteria bacterium in the Complex with THDP, Coenzyme A, and ADP
Classification: LYASE
Source organism: Alphaproteobacteria bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2024-02-11
Authors: Gade, P., Kim, Y., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vzg: Carbonic anhydrase II mutant with DRD function
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-02-11
Authors: Sethi, D.K.
PDB entry 8vzh: Crystal Structure of 2-Hydroxyacyl-CoA lyase/synthase TbHACS from Thermoflexaceae bacterium in the Complex with THDP and ADP
Classification: LYASE
Source organism: Thermoflexaceae bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-02-11
Authors: Kim, Y., Maltseva, M., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vzi: Crystal Structure of 2-Hydroxyacyl-CoA Lyase/Synthase CcHACS from Conidiobolus coronatus in the Complex with THDP and ADP
Classification: LYASE
Source organism: Conidiobolus coronatus NRRL 28638
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-11
Authors: Kim, Y., Gade, P., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vzj: Crystal Structure of 2-Hydroxyacyl-CoA Lyase/Synthase DhcHACS from Dehalococcoidia bacterium in the Complex with THDP and ADP
Classification: LYASE
Source organism: Dehalococcoidia bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-02-11
Authors: Kim, Y., Gade, P., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vzk: Crystal Structure of 2-Hydroxyacyl-CoA Lyase/Synthase CfhHACS from Chloroflexi bacterium in the Complex with THDP and ADP
Classification: LYASE
Source organism: Chloroflexi bacterium HGW-Chloroflexi-9
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-02-11
Authors: Kim, Y., Gade, P., Mayfield, A., Endres, M., Lee, S., Yoshikuni, Y., Gonzalez, R., Michalska, K., Joachimiak, A.
PDB entry 8vzl: DNA Ligase 1 captured with pre-step 3 ligation at the rG:C nicksite
Classification: Ligase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2024-02-11
Authors: KanalElamparithi, B., Gulkis, M., Caglayan, M.
PDB entry 8vzm: DNA Ligase 1 captured with pre-step 3 ligation at the rA:T nicksite
Classification: Ligase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2024-02-11
Authors: KanalElamparithi, B., Gulkis, M., Caglayan, M.
PDB entry 8vzn: Cryo-EM structure of FLVCR2 in the inward-facing state with choline bound
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2024-02-12
Authors: Cater, R.J., Mancia, F.
PDB entry 8vzo: Cryo-EM structure of FLVCR2 in the outward-facing state with choline bound
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2024-02-12
Authors: Cater, R.J., Mancia, F.
PDB entry 8vzp: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with k-403
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-02-12
Authors: Min, C.K., Nwachukwu, J.C., Hou, Y., Russo, R.J., Papa, A., Min, J., Peng, R., Kim, S.H., Ziegler, Y., Rangarajan, E.S., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 8vzq: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with k-406
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-02-12
Authors: Min, C.K., Nwachukwu, J.C., Hou, Y., Russo, R.J., Papa, A., Min, J., Peng, R., Kim, S.H., Ziegler, Y., Rangarajan, E.S., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 8vzr: Crystal structure of dehaloperoxidase A in complex with substrate 4-bromo-o-cresol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-02-12
Authors: Aktar, M.S., de Serrano, V.S., Ghiladi, R.A., Franzen, S.