LiteFold/PDB huggingface dataset:
PDB entry 6wnl: human Artemis/SNM1C catalytic domain, crystal form 2
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2020-04-22
Authors: Karim, F., Liu, S., Laciak, A.R., Volk, L., Rosenblum, M., Curtis, R., Huang, N., Carr, G., Zhu, G.
PDB entry 6wnm: The structure of Pf4r from a superinfective isolate of the filamentous phage Pf4 of Pseudomonas aeruginosa PA01
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2020-04-22
Authors: Michie, K.A., Norrian, P., Duggin, I.G., McDougald, D., Rice, S.A.
PDB entry 6wnn: Bacillus subtilis BioA in complex with amino donor L-Lys
Classification: TRANSFERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2020-04-22
Authors: Souza, S.A., Ng, H.L.
PDB entry 6wno: Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 243244
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium vivax (strain Salvador I)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2020-04-23
Authors: Chan, L.J., Dietrich, M.H., Tham, W.H.
PDB entry 6wnp: X-ray Structure of SARS-CoV-2 main protease bound to Boceprevir at 1.45 A
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.443 Å
Deposited: 2020-04-23
Authors: Anson, B., Mesecar, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6wnq: E. coli ATP Synthase State 2a
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-04-23
Authors: Stewart, A.G., Sobti, M., Walshe, J.L.
PDB entry 6wnr: E. coli ATP synthase State 3b
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-04-23
Authors: Stewart, A.G., Sobti, M., Walshe, J.L.
PDB entry 6wns: The structure of a CoA-dependent acyl-homoserine lactone synthase, MesI
Classification: TRANSFERASE
Source organism: Mesorhizobium sp. ORS 3359
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2020-04-23
Authors: Dong, S.-H., Nair, S.K.
PDB entry 6wnt: 50S ribosomal subunit without free 5S rRNA and perturbed PTC
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-23
Authors: Loveland, A.B., Korostelev, A.A., Mankin, A.S., Huang, S., Aleksashin, N.A., Klepacki, D., Reier, K., Kefi, A., Szal, A., Remme, J., Jaeger, L., Vazquez-Laslop, N.
PDB entry 6wnu: Crystal structure of the three-domain cyclomaltodextrin glucanotransferase CldA in the monomeric form
Classification: TRANSFERASE
Source organism: Caldanaerobacter subterraneus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2020-04-23
Authors: Magana-Cuevas, E., Centeno-Leija, S., Serrano-Posada, H.
PDB entry 6wnv: 70S ribosome without free 5S rRNA and with a perturbed PTC
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-04-23
Authors: Loveland, A.B., Korostelev, A.A., Mankin, A.S., Huang, S., Aleksashin, N.A., Klepacki, D., Reier, K., Kefi, A., Szal, A., Remme, J., Jaeger, L., Vazquez-Laslop, N.
PDB entry 6wnw: Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-04-23
Authors: Loveland, A.B., Korostelev, A.A., Mankin, A.S., Huang, S., Aleksashin, N.A., Klepacki, D., Reier, K., Kefi, A., Szal, A., Remme, J., Jaeger, L., Vazquez-Laslop, N.
PDB entry 6wnx: FBXW11-SKP1 in complex with a pSer33/pSer37 Beta-Catenin peptide
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-04-23
Authors: Ivanochko, D., Edwards, A.M., Bountra, C., Arrowsmith, C.H., Boettcher, J., Structural Genomics Consortium (SGC)
PDB entry 6wny: Crystal structure of BACE1 in complex with (Z)-fluoro-olefin containing compound 15
Classification: HYDROLASE/HYDROLASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2020-04-23
Authors: Whittington, D.A.
PDB entry 6wnz: Structure of a dimer of the Sulfolobus solfataricus MCM N-terminal domain reveals potential role in MCM ring opening
Classification: REPLICATION, HYDROLASE
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-23
Authors: Meagher, M., Spence, M.N., Enemark, E.J.
PDB entry 6wo0: human Artemis/SNM1C catalytic domain, crystal form 1
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2020-04-23
Authors: Karim, F., Liu, S., Laciak, A.R., Volk, L., Rosenblum, M., Curtis, R., Huang, N., Carr, G., Zhu, G.
PDB entry 6wo1: Hybrid acetohydroxyacid synthase complex structure with Cryptococcus neoformans AHAS catalytic subunit and Saccharomyces cerevisiae AHAS regulatory subunit
Classification: TRANSFERASE
Source organism: Cryptococcus neoformans; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2020-04-23
Authors: Guddat, L.W., Lonhienne, T.
PDB entry 6wo2: Crystal Structure of the Grb2 SH2 Domain in Complex with a Tripeptide: Ac-pY-Ac6c-N-isohexyl
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-24
Authors: Martin, S.F., Clements, J.H.
PDB entry 6wo3: Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody U1
Classification: IMMUNE SYSTEM/Viral Protein
Source organism: Homo sapiens; Recombinant Hepatitis C virus HK6a/JFH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.382 Å
Deposited: 2020-04-24
Authors: Tzarum, N., Wilson, I.A., Law, M.
PDB entry 6wo4: Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody HC11
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Recombinant Hepatitis C virus HK6a/JFH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.349 Å
Deposited: 2020-04-24
Authors: Tzarum, N., Wilson, I.A., Law, M.
PDB entry 6wo5: Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 1a bound to neutralizing antibody 212.1.1 and non neutralizing antibody E1
Classification: IMMUNE SYSTEM/Viral Protein
Source organism: Hepatitis C virus (isolate H); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.619 Å
Deposited: 2020-04-24
Authors: Tzarum, N., Wilson, I.A., Law, M.
PDB entry 6wo6: Structure of RavA (lpp0008) E38A/K39A surface entropy reduction mutant
Classification: CELL INVASION
Source organism: Legionella pneumophila str. Paris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-04-24
Authors: Cygler, M., Chung, I.Y.W.
PDB entry 6wo7: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-Diphosphoinositol pentakisphosphate (5-IP7), Mg, and Fluoride ion
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6wo8: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-diphosphoinositol 1,3,4,6-tetrakisphosphate (5-PP-IP4), Mg, and Fluoride ion
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6wo9: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 1-diphosphoinositol pentakisphosphate (1-IP7) and Mg
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6woa: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 2-Diphosphoinositol pentakisphosphate (2-IP7), Mg, and Fluoride ion
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6wob: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 4-diphosphoinositol pentakisphosphate (4-IP7), Mg, and Fluoride ion
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, B.S.
PDB entry 6woc: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-diphosphoinositol pentakisphosphate and Mg, presoaked with 5-IP7, Mg and Fluoride, soaking 1min in the absence of Fluoride.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6wod: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with inositol hexakisphosphate and Mg, presoaked with 5-IP7, Mg and Fluoride, soaking 2min in the absence of Fluoride.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6woe: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with inositol hexakisphosphate and Mg, presoaked with 5-IP7, Mg and Fluoride, soaking 10min in the absence of Fluoride.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6wof: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with inositol hexakisphosphate and Mg, presoaked with 5-IP7, Mg and Fluoride, soaking 20min in the absence of Fluoride.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6wog: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-methylenebisphosphonate inositol pentakisphosphate (5-PCP-IP5)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6woh: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 1,5-di-methylenebisphosphonate inositol tetrakisphosphate (1,5-PCP-IP4)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6woi: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 1-Diphosphoinositol pentakisphosphate, Mg, and Fluoride ion, presoaked with 1,5-IP8, Mg and Fluoride for 30 seconds
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-04-24
Authors: Zong, G.N., Wang, H.C., Shears, S.B.
PDB entry 6woj: Structure of the SARS-CoV-2 macrodomain (NSP3) in complex with ADP-ribose
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-04-24
Authors: Lovell, S., Kashipathy, M.M., Battaile, K.P., Gao, F.P., Fehr, A.R.
PDB entry 6wok: Crystal structure of estrogen receptor alpha in complex with receptor degrader 6
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.309 Å
Deposited: 2020-04-24
Authors: Kiefer, J.R., Vinogradova, M., Liang, J., Zhang, B., Wang, X., Labadie, S.
PDB entry 6wol: Next generation monomeric IgG4 Fc bound to neonatal Fc receptor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2020-04-24
Authors: Oganesyan, V.Y., Shan, L., van Dyk, N., Dall'Acqua, W.F.
PDB entry 6wom: Crystal structure of Aspartyl-tRNA ligase from Elizabethkingia sp.
Classification: LIGASE
Source organism: Elizabethkingia anophelis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-04-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6won: Crystal structure of acetoin dehydrogenase YohF from Salmonella typhimurium
Classification: OXIDOREDUCTASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2020-04-25
Authors: Stogios, P.J., Skarina, T., Mesa, N., Endres, M., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6woo: CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-04-25
Authors: Wang, J., Wang, J., Puglisi, J., Fernandez, I.S.
PDB entry 6wop: Crystal structure of gamma-aminobutyrate aminotransferase PuuE from Acinetobacter baumannii
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-04-25
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6woq: Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 1a bound to neutralizing antibody HC1AM and non neutralizing antibody E1
Classification: IMMUNE SYSTEM/Viral Protein
Source organism: Hepatitis C virus (isolate H); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.667 Å
Deposited: 2020-04-25
Authors: Tzarum, N., Wilson, I.A., Law, M.
PDB entry 6wor: Structure of the broadly neutralizing antibody HC1AM
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2020-04-25
Authors: Tzarum, N., Wilson, I.A., Law, M.
PDB entry 6wos: Structure of broadly neutralizing antibody AR3B
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.645 Å
Deposited: 2020-04-25
Authors: Tzarum, N., Wilson, I.A., Law, M.
PDB entry 6wot: Cryo-EM structure of recombinant rabbit Ryanodine Receptor type 1 mutant R164C in complex with FKBP12.6
Classification: TRANSPORT PROTEIN/ISOMERASE
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2020-04-25
Authors: Iyer, K.A., Hu, Y., Kurebayashi, N., Murayama, T., Samso, M.
PDB entry 6wou: Cryo-EM structure of recombinant mouse Ryanodine Receptor type 2 mutant R176Q in complex with FKBP12.6 in nanodisc
Classification: TRANSPORT PROTEIN/ISOMERASE
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2020-04-25
Authors: Iyer, K.A., Hu, Y., Kurebayashi, N., Murayama, T., Samso, M.
PDB entry 6wov: Cryo-EM structure of recombinant mouse Ryanodine Receptor type 2 wild type in complex with FKBP12.6
Classification: TRANSPORT PROTEIN/ISOMERASE
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.1 Å
Deposited: 2020-04-25
Authors: Iyer, K.A., Hu, Y., Nayak, A.R., Kurebayashi, N., Murayama, T., Samso, M.
PDB entry 6wox: Thermus thermophilus RNA polymerase initially transcribing complex with 2'dCTP
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2020-04-26
Authors: Shin, Y., Murakami, K.S.
PDB entry 6woy: Thermus thermophilus RNA polymerase initially transcribing complex with 3'dCTP
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-04-26
Authors: Shin, Y., Murakami, K.S.
PDB entry 6woz: Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 251249
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium vivax (strain Salvador I)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-04-26
Authors: Chan, L.J., Dietrich, M.H., Tham, W.H.
PDB entry 6wp0: The Crystal Structure of Domain-Swapped Trimer Q108K:T51D variant of HCRBPII
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2020-04-26
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 6wp1: The Crystal Structure of Apo Domain-Swapped Trimer Q108K:K40L:T51K Variant of HCRBPII
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2020-04-26
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 6wp2: The Crystal Structure of Apo Zinc-Bound Domain Swapped-Trimer Q108K:K40D:T53A:R58L:Q38F:Q4F:F57H Variant of HCRBPII
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2020-04-26
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 6wp3: Pyruvate Kinase M2 Mutant-K433Q
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-04-26
Authors: Nandi, S., Razzaghi, M., Srivastava, D., Dey, M.
PDB entry 6wp4: Pyruvate Kinase M2 mutant-S37E
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-04-26
Authors: Nandi, S., Razzaghi, M., Srivastava, D., Dey, M.
PDB entry 6wp5: Pyruvate Kinase M2 mutant-S37D
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2020-04-26
Authors: Nandi, S., Razzaghi, M., Srivastava, D., Dey, M.
PDB entry 6wp6: Pyruvate Kinase M2 mutant-S37E K433E
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2020-04-26
Authors: Nandi, S., Razzaghi, M., Srivastava, D., Dey, M.
PDB entry 6wp7: Avenolide Binding Autoregulator AvaR1
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces avermitilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-04-26
Authors: Kapoor, I., Olivares, P.J., Nair, S.K.
PDB entry 6wp8: Proton-pumping mutant of Mastigocladopsis repens rhodopsin chloride pump
Classification: MEMBRANE PROTEIN
Source organism: Mastigocladopsis repens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-04-26
Authors: Besaw, J.E., Ernst, O.P., Ou, W., Morizumi, T.
PDB entry 6wp9: AvaR1 bound to Avenolide
Classification: DNA BINDING PROTEIN/HORMONE
Source organism: Streptomyces avermitilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-26
Authors: Kapoor, I., Olivares, P.J., Nair, S.K.
PDB entry 6wpa: Structure of AvaR1 bound to DNA half-site
Classification: DNA BINDING PROTEIN/DNA
Source organism: Streptomyces avermitilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2020-04-26
Authors: Kapoor, I., Olivares, P.J., Nair, S.K.
PDB entry 6wpb: NMR Structure of HSP1-NH2 antimicrobial peptide in presence of SDS-d25 micelles
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-04-27
Authors: Verly, R.M., Gomes, I.P.
PDB entry 6wpc: Crystal structure of Bacillus thuringiensis Cry1A.2 tryptic core variant
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2020-04-27
Authors: Rydel, T.J., Evdokimov, A.
PDB entry 6wpd: NMR Structure of HSP1-NH2 antimicrobial peptide in presence of DPC-d38 micelles
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-04-27
Authors: Verly, R.M., Gomes, I.P.
PDB entry 6wpe: HUMAN IDO1 IN COMPLEX WITH COMPOUND 4
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2020-04-27
Authors: Lesburg, C.A., Lammens, A.
PDB entry 6wpf: Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and d4T
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate HXB2); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2020-04-27
Authors: Bertoletti, N., Anderson, K.S.
PDB entry 6wpg: Structural Basis of Salicylic Acid Perception by Arabidopsis NPR Proteins
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.283 Å
Deposited: 2020-04-27
Authors: Wang, W., Withers, J., Li, H., Zwack, P.J., Rusnac, D.V., Shi, H., Liu, L., Yan, S., Hinds, T.R., Guttman, M., Dong, X., Zheng, N.
PDB entry 6wph: Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and (-)-FTC
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate HXB2); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2020-04-27
Authors: Bertoletti, N., Anderson, K.S.
PDB entry 6wpi: Crystal structure of Nop9 in complex with ITS1 RNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2020-04-27
Authors: Zhang, J., Qiu, C., Hall, T.M.T.
PDB entry 6wpj: Structure of HIV-1 Reverse Transcriptase (RT) in complex with dsDNA and d4T
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate HXB2); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2020-04-27
Authors: Bertoletti, N., Anderson, K.S.
PDB entry 6wpk: SARM1 Autoinhibited Conformation
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-04-27
Authors: Xie, T., Bratkowski, M., Bai, X., Sambashivan, S.
PDB entry 6wpl: Structure of Cytochrome P450tcu
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas sp. TCU-HL1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.097 Å
Deposited: 2020-04-27
Authors: Murarka, V.C., Batabyal, D., Amaya, J.A., Sevrioukova, I.F., Poulos, T.L.
PDB entry 6wpm: Crystal structure of a putative oligosaccharide periplasmic-binding protein from Synechococcus sp. MITs9220 in complex with zinc
Classification: TRANSPORT PROTEIN
Source organism: Synechococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2020-04-27
Authors: Ford, B.A., Michie, K.A., Paulsen, I.T., Mabbutt, B.C., Shah, B.S.
PDB entry 6wpn: Crystal structure of a putative oligosaccharide periplasmic-binding protein from Synechococcus sp. MITs9220
Classification: TRANSPORT PROTEIN
Source organism: Synechococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2020-04-27
Authors: Ford, B.A., Michie, K.A., Paulsen, I.T., Mabbutt, B.C., Shah, B.S.
PDB entry 6wpo: NMR Structure of HSP-4 antimicrobial peptide in presence of DPC-d38 micelles
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-04-27
Authors: Verly, R.M., Nunes, L.O.
PDB entry 6wpp: HUMAN NIK IN COMPLEX WITH LIGAND COMPOUND X
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-04-27
Authors: Shih, A.Y., Hack, M., Mirzadegan, T.
PDB entry 6wpq: GNYNVF from hnRNPA2-low complexity domain segment, residues 286-291, D290V variant
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2020-04-27
Authors: Lu, J., Cao, Q., Hughes, M.P., Sawaya, M.R., Boyer, D.R., Cascio, D., Eisenberg, D.S.
PDB entry 6wpr: Crystal structure of a putative 3-oxoacyl-ACP reductase (FabG) with NADP(H) from Acinetobacter baumannii
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-04-27
Authors: Cross, E.M., Forwood, J.K.
PDB entry 6wps: Structure of the SARS-CoV-2 spike glycoprotein in complex with the S309 neutralizing antibody Fab fragment
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-27
Authors: Pinto, D., Park, Y.J., Beltramello, M., Walls, A.C., Tortorici, M.A., Bianchi, S., Jaconi, S., Culap, K., Zatta, F., De Marco, A., Peter, A., Guarino, B., Spreafico, R., Cameroni, E., Case, J.B., Chen, R.E., Havenar-Daughton, C., Snell, G., Virgin, H.W., Lanzavecchia, A., Diamond, M.S., Fink, K., Veesler, D., Corti, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6wpt: Structure of the SARS-CoV-2 spike glycoprotein in complex with the S309 neutralizing antibody Fab fragment (open state)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-04-27
Authors: Pinto, D., Park, Y.J., Beltramello, M., Walls, A.C., Tortorici, M.A., Bianchi, S., Jaconi, S., Culap, K., Zatta, F., De Marco, A., Peter, A., Guarino, B., Spreafico, R., Cameroni, E., Case, J.B., Chen, R.E., Havenar-Daughton, C., Snell, G., Virgin, H.W., Lanzavecchia, A., Diamond, M.S., Fink, K., Veesler, D., Corti, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6wpu: Structure of S-allyl-L-cysteine S-oxygenase from Allium sativum
Classification: FLAVOPROTEIN, OXIDOREDUCTASE
Source organism: Allium sativum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.084 Å
Deposited: 2020-04-27
Authors: Tanner, J.J., Campbell, A.C., Schuermann, J.P.
PDB entry 6wpv: Solution NMR structure of the orbitide xanthoxycyclin D
Classification: PLANT PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-04-28
Authors: Rosengren, K.J., Payne, C.D.
PDB entry 6wpw: GCGR-Gs signaling complex bound to a designed glucagon derivative
Classification: SIGNALING PROTEIN/HORMONE/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-28
Authors: Hilger, D., Krishna Kumar, K., Hu, H., Mathiesen, J.M., Skiniotis, G., Kobilka, B.K.
PDB entry 6wpx: Crystal structure of Bacillus licheniformis lipase BlEst2 in propetide form
Classification: HYDROLASE
Source organism: Bacillus licheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-28
Authors: Nakamura, A.M., Godoy, A.S., Kadowaki, M.A.S., Polikarpov, I.
PDB entry 6wpy: Crystal structure of Bacillus licheniformis lipase BlEst2 in mature form
Classification: HYDROLASE
Source organism: Bacillus licheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2020-04-28
Authors: Nakamura, A.M., Godoy, A.S., Kadowaki, M.A.S., Polikarpov, I.
PDB entry 6wpz: The structure of Pf4r from a superinfective isolate of the filamentous phage Pf4 of Pseudomonas aeruginosa PA01
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.993 Å
Deposited: 2020-04-28
Authors: Michie, K.A., Norrian, P., Duggin, I.G., McDougald, D., Rice, S.A.
PDB entry 6wq0: Cryo-EM of the S. solfataricus rod-shaped virus, SSRV1
Classification: VIRUS
Source organism: unclassified Rudivirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-04-28
Authors: Wang, F., Baquero, D.P., Beltran, L.C., Prangishvili, D., Krupovic, M., Egelman, E.H.
PDB entry 6wq1: Eukaryotic LanCL2 protein
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.295 Å
Deposited: 2020-04-28
Authors: Nair, S.K., Garg, N.
PDB entry 6wq2: Cryo-EM of the S. islandicus filamentous virus, SIFV
Classification: VIRUS
Source organism: Sulfolobus islandicus filamentous virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-04-28
Authors: Wang, F., Baquero, D.P., Su, Z., Zheng, W., Prangishvili, D., Krupovic, M., Egelman, E.H.
PDB entry 6wq3: Crystal Structure of Nsp16-Nsp10 Heterodimer from SARS-CoV-2 in Complex with 7-methyl-GpppA and S-adenosyl-L-homocysteine.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-04-28
Authors: Minasov, G., Shuvalova, L., Rosas-Lemus, M., Brunzelle, J.S., Kiryukhina, O., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6wq4: Carbonic Anhydrase II Complexed with 2-((2-Cyanoethyl)(phenethyl)amino)-N-phenethyl-N-(4-sulfamoylphenethyl)acetamide
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2020-04-28
Authors: Andring, J.T., Combs, J.E., Lomelino, C., McKenna, R.
PDB entry 6wq5: Carbonic Anhydrase II Complexed with 2-((3-Aminopropyl)(phenethyl)amino)-N-(furan-2-ylmethyl)-N-(4-sulfamoylphenethyl)acetamide
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.304 Å
Deposited: 2020-04-28
Authors: Andring, J.T., Combs, J.E., Lomelino, C., McKenna, R.
PDB entry 6wq6: Xanthomonas citri Methionyl-tRNA synthetase in complex with methionine
Classification: LIGASE
Source organism: Xanthomonas citri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-04-28
Authors: Mercaldi, G.F., Benedetti, C.E.
PDB entry 6wq7: Carbonic Anhydrase II Complexed with 2-((3-Aminopropyl)(phenethyl)amino)-N-(4-fluorobenzyl)-N-(4-sulfamoylphenethyl)acetamide
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.304 Å
Deposited: 2020-04-28
Authors: Andring, J.T., Combs, J.E., Lomelino, C., McKenna, R.
PDB entry 6wq8: Carbonic Anhydrase II Complexed with 3-((2-((Furan-2-ylmethyl)(4-sulfamoylphenethyl)amino)-2-oxoethyl)(phenethyl)amino)propanoic acid
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.405 Å
Deposited: 2020-04-28
Authors: Andring, J.T., Combs, J.E., Lomelino, C., McKenna, R.
PDB entry 6wq9: Carbonic Anhydrase II Complexed with 3-((2-((Naphthalen-2-ylmethyl)(4-sulfamoylphenethyl)amino)-2-oxoethyl)(phenethyl)amino)propanoic acid
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.305 Å
Deposited: 2020-04-28
Authors: Andring, J.T., Combs, J.E., Lomelino, C., McKenna, R.
PDB entry 6wqa: 2.0A angstrom A2a adenosine receptor structure using XFEL data collected in helium atmosphere.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-28
Authors: Lee, M.-Y., Geiger, J., Ishchenko, A., Han, G.W., Barty, A., White, T.A., Gati, C., Batyuk, A., Hunter, M.S., Aquila, A., Boutet, S., Weierstall, U., Cherezov, V., Liu, W.
PDB entry 6wqb: Crystal structure of VipF from Legionella hackeliae in complex with acetyl-CoA
Classification: TRANSFERASE
Source organism: Legionella hackeliae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-04-28
Authors: Stogios, P.J., Skarina, T., Wawrzak, Z., Sandoval, J., Di Leo, R., Savchenko, A.
PDB entry 6wqc: Crystal structure of VipF from Legionella hackeliae in complex with CoA
Classification: TRANSFERASE
Source organism: Legionella hackeliae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2020-04-28
Authors: Stogios, P.J., Skarina, T., Wawrzak, Z., Sandoval, J., Di Leo, R., Savchenko, A.
PDB entry 6wqd: The 1.95 A Crystal Structure of the Co-factor Complex of NSP7 and the C-terminal Domain of NSP8 from SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-04-28
Authors: Kim, Y., Wilamowski, M., Jedrzejczak, R., Maltseva, N., Endres, M., Godzik, A., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6wqe: Solution Structure of the IWP-051-bound H-NOX from Shewanella woodyi in the Fe(II)CO ligation state
Classification: SIGNALING PROTEIN
Source organism: Shewanella woodyi
Experimental method: SOLUTION NMR
Deposited: 2020-04-28
Authors: Chen, C.Y., Lee, W., Montfort, W.R.
PDB entry 6wqf: Structural Plasticity of the SARS-CoV-2 3CL Mpro Active Site Cavity Revealed by Room Temperature X-ray Crystallography
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-04-28
Authors: Kneller, D.W., Kovalevsky, A., Coates, L.
PDB entry 6wqg: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J3 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.003 Å
Deposited: 2020-04-28
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wqh: Molecular basis for the ATPase-powered substrate translocation by the Lon AAA+ protease
Classification: MOTOR PROTEIN
Source organism: Dictyostelium discoideum; Meiothermus taiwanensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-04-28
Authors: Zhang, K., Li, S., Hsiehb, K., Sub, S., Pintilie, G., Chiu, W., Chang, C.
PDB entry 6wqi: Xanthomonas citri Methionyl-tRNA synthetase (apo)
Classification: LIGASE
Source organism: Xanthomonas citri
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-28
Authors: Mercaldi, G.F., Benedetti, C.E.
PDB entry 6wqj: Solution structure of vicilin-buried peptide-10 from cucumber
Classification: PLANT PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-04-29
Authors: Payne, C.D., Rosengren, K.J.
PDB entry 6wqk: hnRNPA2 Low complexity domain (LCD) determined by cryoEM
Classification: PROTEIN FIBRIL
Source organism: Anaplasma marginale; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-29
Authors: Lu, J., Cao, Q., Hughes, M.P., Sawaya, M.R., Boyer, D.R., Cascio, D., Eisenberg, D.S.
PDB entry 6wql: Solution structure of the seed peptide C2 (VBP-1) from pumpkin
Classification: PLANT PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-04-29
Authors: Payne, C.P., Rosengren, K.J.
PDB entry 6wqm: Crystal structure of 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase from Bartonella henselae
Classification: TRANSFERASE
Source organism: Bartonella henselae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-04-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6wqn: Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
Classification: RIBOSOME
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-04-29
Authors: Belousoff, M.J.
PDB entry 6wqo: Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 283284
Classification: CELL INVASION
Source organism: Homo sapiens; Plasmodium vivax (strain Salvador I)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2020-04-29
Authors: Chan, L.J., Dietrich, M.H., Tham, W.H.
PDB entry 6wqp: GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis
Classification: HYDROLASE
Source organism: Ruminococcus champanellensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-29
Authors: Bianchetti, C.M., Bingman, C.A., Smith, R.W., Glasgow, E.M., Fox, B.G.
PDB entry 6wqq: Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, radezolid
Classification: RIBOSOME
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-29
Authors: Belousoff, M.J.
PDB entry 6wqr: NMR solution structure of leech peptide HSTX-I
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2020-04-29
Authors: Schroeder, C.I., McMahon, K.L.
PDB entry 6wqs: Xanthomonas citri Methionyl-tRNA synthetase in complex with REP8839
Classification: LIGASE
Source organism: Xanthomonas citri
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-29
Authors: Mercaldi, G.F., Benedetti, C.E.
PDB entry 6wqt: Xanthomonas citri Methionyl-tRNA synthetase in complex with REP3123
Classification: LIGASE
Source organism: Xanthomonas citri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-04-29
Authors: Mercaldi, G.F., Benedetti, C.E.
PDB entry 6wqu: CSL (RBPJ) bound to Notch3 RAM and DNA
Classification: TRANSCRIPTION/SIGNALING PROTEIN/DNA
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2020-04-29
Authors: Kovall, R.A., Gagliani, E., Hall, D.
PDB entry 6wqv: GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose
Classification: HYDROLASE
Source organism: Ruminococcus champanellensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-04-29
Authors: Bianchetti, C.M., Bingman, C.A., Smith, R.W., Glasgow, E.M., Fox, B.G.
PDB entry 6wqw: Thermobacillus composti GH10 xylanase
Classification: HYDROLASE
Source organism: Thermobacillus composti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2020-04-29
Authors: Briganti, L., Polikarpov, I.
PDB entry 6wqx: Human PRPK-TPRKB complex
Classification: PROTEIN BINDING/TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2020-04-29
Authors: Li, J., Ma, X.L., Banerjee, S., Dong, Z.G.
PDB entry 6wqy: GH5-4 broad specificity endoglucanase from Bacteroides salanitronis
Classification: HYDROLASE
Source organism: Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2020-04-29
Authors: Bingman, C.A., Smith, R.W., Glasgow, E.M., Fox, B.G.
PDB entry 6wqz: Structure of human ATG9A, the only transmembrane protein of the core autophagy machinery
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-04-29
Authors: Guardia, C.M., Tan, X., Lian, T., Rana, M.S., Zhou, W., Christenson, E.T., Lowry, A.J., Faraldo-Gomez, J.D., Bonifacino, J.S., Jiang, J., Banerjee, A.
PDB entry 6wr0: Human steroidogenic cytochrome P450 17A1 with 3-keto-delta4-abiraterone analog
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-04-29
Authors: Petrunak, E.M., Bart, A.G., Scott, E.E.
PDB entry 6wr1: Human steroidogenic cytochrome P450 17A1 mutant N52Y with inhibitor abiraterone
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-04-29
Authors: Petrunak, E.M., Bart, A.G., Scott, E.E.
PDB entry 6wr2: ClpP and ClpX IGF loop in ClpX-ClpP complex bound to ssrA tagged GFP
Classification: CHAPERONE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2020-04-29
Authors: Fei, X., Sauer, R.T.
PDB entry 6wr3: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J36 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.173 Å
Deposited: 2020-04-29
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wr4: Structure of human ATG9A, the only transmembrane protein of the core autophagy machinery
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-04-29
Authors: Guardia, C.M., Tan, X., Lian, T., Rana, M.S., Zhou, W., Christenson, E.T., Lowry, A.J., Faraldo-Gomez, J.D., Bonifacino, J.S., Jiang, J., Banerjee, A.
PDB entry 6wr5: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J35 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.063 Å
Deposited: 2020-04-29
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wr7: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J33 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2020-04-29
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wr9: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J32 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.071 Å
Deposited: 2020-04-29
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wra: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J34 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-04-29
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wrb: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J5 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2020-04-29
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wrc: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J31 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.178 Å
Deposited: 2020-04-29
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wre: Crystal structure of mouse DXO in complex with 5'-OH RNA substrate mimic and calcium ion
Classification: HYDROLASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-04-29
Authors: Doamekpor, S.K., Tong, L.
PDB entry 6wrf: ClpX-ClpP complex bound to GFP-ssrA, recognition complex
Classification: CHAPERONE
Source organism: Aequorea victoria; Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2020-04-29
Authors: Fei, X., Sauer, R.T.
PDB entry 6wrh: The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-29
Authors: Osipiuk, J., Tesar, C., Jedrzejczak, R., Endres, M., Welk, L., Babnigg, G., Kim, Y., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6wri: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J28 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.057 Å
Deposited: 2020-04-29
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wrj: Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J26 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.129 Å
Deposited: 2020-04-29
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6wrk: Crystal structure of 3rd-generation Mj 3-nitro-tyrosine tRNA synthetase ("A7") bound to 3-nitro-tyrosine
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-04-29
Authors: Beyer, J.N., Hosseinzadeh, P., Karplus, P.A., Mehl, R.A., Cooley, R.B.
PDB entry 6wrl: The interaction of chlorido(1,5-cyclooctadiene)([4-(2-((tert-butoxycarbonyl)amino)-3-methoxy-3-oxopropyl)-1,3-dimethyl-1H-imidazol-3-ide])rhodium(I) with HEWL after 1 week
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2020-04-29
Authors: Sullivan, M.P., John, M., Hartinger, C.G., Goldstone, D.C.
PDB entry 6wrm: The interaction of chlorido(1,5-cyclooctadiene)([4-(2-((tert-butoxycarbonyl)amino)-3-methoxy-3-oxopropyl)-1,3-dimethyl-1H-imidazol-3-ide])rhodium(I) with HEWL after 1 month
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-04-29
Authors: Sullivan, M.P., John, M., Hartinger, C.G., Goldstone, D.C.
PDB entry 6wrn: Crystal structure of Mj 3-nitro-tyrosine tRNA synthetase (5B) C70A variant bound to 3-nitro-tyrosine
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-04-29
Authors: Beyer, J.N., Hosseinzadeh, P., Karplus, P.A., Mehl, R.A., Cooley, R.B.
PDB entry 6wro: CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM BUT NO LITHIUM AT 3 ANGSTROM RESOLUTION
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-04-29
Authors: Dollins, D.E., Endo-Streeter, S., York, J.D.
PDB entry 6wrp: Crystal Structure of PI3-E12 Fab, An Antibody Against Human Parainfluenza Virus Type III
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2020-04-29
Authors: Weidle, C., Pancera, M.
PDB entry 6wrq: Crystal structure of Mj 3-nitro-tyrosine tRNA synthetase (5B) S158C variant bound to 3-nitro-tyrosine
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-04-29
Authors: Beyer, J.N., Hosseinzadeh, P., Karplus, P.A., Mehl, R.A., Cooley, R.B.
PDB entry 6wrr: CRYSTAL STRUCTURE OF INOSITOL POLYPHOSPHATE 1-PHOSPHATASE INPP1 IN COMPLEX GADOLINIUM AND LITHIUM AT 2.5 ANGSTROM RESOLUTION
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-04-30
Authors: Dollins, D.R., Endo-Streeter, S., York, J.D.
PDB entry 6wrs: Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid
Classification: RIBOSOME
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-04-30
Authors: Belousoff, M.J.
PDB entry 6wrt: Crystal structure of Mj 3-nitro-tyrosine tRNA synthetase (5B) C70A/S158C variant bound to 3-nitro-tyrosine
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-04-30
Authors: Beyer, J.N., Hosseinzadeh, P., Karplus, P.A., Mehl, R.A., Cooley, R.B.
PDB entry 6wru: Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid
Classification: RIBOSOME
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-04-30
Authors: Belousoff, M.J.