LiteFold/PDB huggingface dataset:
PDB entry 4kvy: Crystal structure of Aspergillus terreus aristolochene synthase complexed with (1S,8S,9aR)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
Classification: LYASE/LYASE INHIBITOR
Source organism: Aspergillus terreus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-05-23
Authors: Chen, M., Al-lami, N., Janvier, M., D'Antonio, E.L., Faraldos, J.A., Cane, D.E., Allemann, R.K., Christianson, D.W.
PDB entry 4kvz: Crystal structure of the plantazolicin methyltransferase BamL in complex with SAH
Classification: TRANSFERASE
Source organism: Bacillus amyloliquefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-05-23
Authors: Hao, Y., Nair, S.K.
PDB entry 4kw0: Structure of Dickerson-Drew Dodecamer with 2'-MeSe-ara-G modification
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2013-05-23
Authors: Jiang, S., Gan, J., Sheng, J., Sun, H., Huang, Z.
PDB entry 4kw1: Structure of a/egypt/n03072/2010 h5 ha
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-05-23
Authors: Shore, D.A., Yang, H., Carney, P.J., Chang, J.C., Stevens, J.
PDB entry 4kw2: Crystal structure of a Putative uncharacterized protein (BDI_1873) from Parabacteroides distasonis ATCC 8503 at 2.32 A resolution
Classification: ISOMERASE
Source organism: Parabacteroides distasonis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2013-05-23
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4kw3: Crystal structure of the non-structural protein 1 N-terminal origin-recognition/nickase domain from the emerging human bocavirus
Classification: VIRAL PROTEIN
Source organism: Human bocavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-05-23
Authors: Tewary, S.K., Zhao, H., Tang, L.
PDB entry 4kw4: Crystal Structure of Green Fluorescent Protein
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.746 Å
Deposited: 2013-05-23
Authors: Barnard, T.J., Yu, X., Noinaj, N., Taraska, J.W.
PDB entry 4kw5: M. tuberculosis DprE1 in complex with inhibitor TCA1
Classification: oxidoreductase/oxidoreductase INHIBITOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.612 Å
Deposited: 2013-05-23
Authors: Batt, S.M., Besra, G.S., Futterer, K.
PDB entry 4kw6: Crystal structure of Peroxiredoxin-1 (C-terminal truncation mutant) from the human hookworm Ancylostoma ceylanicum bound to conoidin A
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Ancylostoma ceylanicum
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-05-23
Authors: Nguyen, J.B., Modis, Y.
PDB entry 4kw7: The structure of an As(III) S-adenosylmethionine methyltransferase with Phenylarsine oxide(PAO)
Classification: TRANSFERASE
Source organism: Cyanidioschyzon sp. 5508
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-23
Authors: Packianathan, C., Marapakala, K., Ajees, A.A., Kandavelu, P., Rosen, B.P.
PDB entry 4kw8: Crystal Structure of Green Fluorescent Protein
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.459 Å
Deposited: 2013-05-23
Authors: Barnard, T.J., Yu, X., Noinaj, N., Taraska, J.W.
PDB entry 4kw9: Crystal Structure of Green Fluorescent Protein
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-23
Authors: Barnard, T.J., Yu, X., Noinaj, N., Taraska, J.W.
PDB entry 4kwa: Crystal structure of a putative transcriptional regulator from Saccharomonospora viridis in complex with choline
Classification: TRANSCRIPTION REGULATOR
Source organism: Saccharomonospora viridis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-23
Authors: Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Endres, M., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)
PDB entry 4kwb: Structure of signal peptide peptidase A with C-termini bound in the active sites: insights into specificity, self-processing and regulation
Classification: HYDROLASE
Source organism: Bacillus subtilis subsp. subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2013-05-23
Authors: Nam, S.E., Paetzel, M.
PDB entry 4kwc: Structure of the plantazolicin methyltransferase BpumL in complex with SAH
Classification: TRANSFERASE
Source organism: Bacillus pumilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.994 Å
Deposited: 2013-05-23
Authors: Hao, Y., Nair, S.K.
PDB entry 4kwd: Crystal structure of Aspergillus terreus aristolochene synthase complexed with (1R,8R,9aS)-1,9a-dimethyl-8-(prop-1-en-2-yl)decahydroquinolizin-5-ium
Classification: LYASE/LYASE INHIBITOR
Source organism: Aspergillus terreus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.857 Å
Deposited: 2013-05-23
Authors: Chen, M., Al-lami, N., Janvier, M., D'Antonio, E.L., Faraldos, J.A., Cane, D.E., Allemann, R.K., Christianson, D.W.
PDB entry 4kwe: GDP-bound, double-stranded, curved FtsZ protofilament structure
Classification: GTP-BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2013-05-23
Authors: Li, Y., Hsin, J., Zhao, L., Cheng, Y., Shang, W., Huang, K.C., Wang, H.W., Ye, S.
PDB entry 4kwf: Crystal Structure Analysis of ALDH2+ALDiB33
Classification: OXIDOREDUCTASE/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2013-05-24
Authors: Hurley, T.D., Kimble-Hill, A.C.
PDB entry 4kwg: Crystal Structure Analysis of ALDH2+ALDiB13
Classification: OXIDOREDUCTASE/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-05-24
Authors: Hurley, T.D., Kimble-Hill, A.C.
PDB entry 4kwh: The crystal structure of angucycline C-6 ketoreductase LanV with bound NADP
Classification: OXIDOREDUCTASE
Source organism: Streptomyces cyanogenus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-05-24
Authors: Paananen, P., Patrikainen, P., Kallio, P., Mantsala, P., Niemi, J., Niiranen, L., Metsa-Ketela, M.
PDB entry 4kwi: The crystal structure of angucycline C-6 ketoreductase LanV with bound NADP and 11-deoxy-6-oxylandomycinone
Classification: Oxidoreductase/antibiotic
Source organism: Streptomyces cyanogenus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-05-24
Authors: Paananen, P., Patrikainen, P., Mantsala, P., Niemi, J., Niiranen, L., Metsa-Ketela, M.
PDB entry 4kwj: Resting state of rat cysteine dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-05-24
Authors: Souness, R.J., Wilbanks, S.M., Jameson, G.B., Jameson, G.N.L.
PDB entry 4kwk: Rat cysteine dioxygenase with cysteine persulfide bound to active site iron
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-05-24
Authors: Souness, R.J., Wilbanks, S.M., Jameson, G.B., Jameson, G.N.L.
PDB entry 4kwl: Rat cysteine dioxygenase with 3-mercaptopropionic acid persulfide bound
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2013-05-24
Authors: Souness, R.J., Wilbanks, S.M., Jameson, G.B., Jameson, G.N.L.
PDB entry 4kwm: Structure of a/anhui/5/2005 h5 ha
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-05-24
Authors: Yang, H., Shore, D.A., Carney, P.J., Chang, J.C., Stevens, J.
PDB entry 4kwn: A new stabilizing water structure at the substrate binding site in ribosome inactivating protein from Momordica balsamina at 1.80 A resolution
Classification: HYDROLASE
Source organism: Momordica balsamina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-24
Authors: Yamini, S., Pandey, S., Singh, A., Bhushan, A., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4kwo: tRNA guanine transglycosylase (TGT) in complex with Furanoside-Based lin-Benzoguanine 3
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Zymomonas mobilis subsp. mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2013-05-24
Authors: Ehrmann, F.R., Heine, A., Klebe, G.
PDB entry 4kwp: Crystal Structure of Human CK2-alpha in complex with a benzimidazole inhibitor (K164) at 1.25 A resolution
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2013-05-24
Authors: Ranchio, A., Lolli, G., Battistutta, R.
PDB entry 4kws: Crystal structure of d-mannonate dehydratase from chromohalobacter salexigens complexed with Mg and glycerol
Classification: HYDROLASE
Source organism: Chromohalobacter salexigens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.642 Å
Deposited: 2013-05-24
Authors: Fedorov, A.A., Fedorov, E.V., Wichelecki, D., Gerlt, J.A., Almo, S.C.
PDB entry 4kwt: Crystal structure of unliganded anabolic ornithine carbamoyltransferase from Vibrio vulnificus at 1.86 A resolution
Classification: TRANSFERASE
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2013-05-24
Authors: Shabalin, I.G., Bacal, P., Bajor, J., Winsor, J., Grimshaw, S., Anderson, W.F., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4kwu: 1.9 Angstrom resolution crystal structure of uncharacterized protein lmo2446 from Listeria monocytogenes EGD-e in complex with alpha-D-glucose, beta-D-glucose, magnesium and calcium
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-05-24
Authors: Halavaty, A.S., Minasov, G., Dubrovska, I., Winsor, J., Shuvalova, L., Peterson, S., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4kwv: Crystal Structure of human apo-QPRT
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.797 Å
Deposited: 2013-05-24
Authors: Malik, S.S., Patterson, D.N., Ncube, Z., Toth, E.A.
PDB entry 4kww: The crystal structure of human quinolinic acid phosphoribosyltransferase in complex with its inhibitor phthalic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2013-05-24
Authors: Malik, S.S., Dimeka, P.N., Ncube, Z., Toth, E.A.
PDB entry 4kwx: Linear structure of the Holliday junction sequence (TCGGCGCCGA)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-05-24
Authors: Skamrova, G., Laponogov, I., Campbell, N., Neidle, S.
PDB entry 4kwy: Crystal structure of a putative lipoprotein (CC_3750) from Caulobacter crescentus CB15 at 2.40 A resolution
Classification: TRANSPORT PROTEIN
Source organism: Caulobacter crescentus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-05-24
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4kx3: Structure of murine cytosolic 5'-nucleotidase III complexed with thymidine monophosphate
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-05-24
Authors: Bitto, E., Bingman, C.A., Grobosky, C.L.
PDB entry 4kx4: Crystal structure of Escherichia coli glutaredoxin 2 complex with glutathione
Classification: ELECTRON TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-05-24
Authors: Ye, J., Venkadesh, S., Rosen, B.P.
PDB entry 4kx5: Cytosolic 5'-nucleotidase III complexed with cytidine 5'-monophosphate
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-05-24
Authors: Bitto, E., Bingman, C.A., Grobosky, C.L.
PDB entry 4kx6: Plasticity of the quinone-binding site of the complex II homolog quinol:fumarate reductase
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2013-05-24
Authors: Singh, P.K., Sarwar, M., Maklashina, E., Kotlyar, V., Rajagukguk, S., Tomasiak, T.M., Cecchini, G., Iverson, T.M.
PDB entry 4kx7: Crystal structure of human aminopeptidase A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-05-24
Authors: Yang, Y., Liu, C., Lin, Y.Y., Li, F.
PDB entry 4kx8: Crystal structure of human aminopeptidase A complexed with amastatin
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-05-24
Authors: Yang, Y., Liu, C., Lin, Y.Y., Li, F.
PDB entry 4kx9: Crystal structure of human aminopeptidase A complexed with arginine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-05-24
Authors: Yang, Y., Liu, C., Lin, Y.Y., Li, F.
PDB entry 4kxa: Crystal structure of human aminopeptidase A complexed with aspartate and calcium
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-05-24
Authors: Yang, Y., Liu, C., Lin, Y.Y., Li, F.
PDB entry 4kxb: Crystal structure of human aminopeptidase A complexed with bestatin
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-05-24
Authors: Yang, Y., Liu, C., Lin, Y.Y., Li, F.
PDB entry 4kxc: Crystal structure of human aminopeptidase A complexed with glutamate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-05-25
Authors: Yang, Y., Liu, C., Lin, Y.Y., Li, F.
PDB entry 4kxd: Crystal structure of human aminopeptidase A complexed with glutamate and calcium
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-05-25
Authors: Yang, Y., Liu, C., Lin, Y.Y., Li, F.
PDB entry 4kxf: Crystal structure of NLRC4 reveals its autoinhibition mechanism
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2013-05-25
Authors: Chai, J., Hu, Z.
PDB entry 4kxh: The X-ray crystal structure of a dimeric variant of human pancreatic ribonuclease
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-05-26
Authors: Pica, A., Merlino, A., Mazzarella, L., Sica, F.
PDB entry 4kxi: Crystallographic study of the complex of Ni(II) Schiff base complex and HEW Lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-05-27
Authors: Koley Seth, B., Ray, A., Basu, S., Biswas, S.
PDB entry 4kxj: Crystal structure of HCoV-OC43 N-NTD complexed with PJ34
Classification: RNA BINDING PROTEIN
Source organism: Human coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2013-05-27
Authors: Lin, S.Y., Hou, M.H.
PDB entry 4kxk: Alanine-glyoxylate aminotransferase variant K390A/K391A in complex with the TPR domain of human Pex5p
Classification: TRANSFERASE/TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-05-27
Authors: Fodor, K., Lou, Y., Wilmanns, M.
PDB entry 4kxl: Crystal structure of DNPH1 (RCL) with 6-CYCLOPENTYL-AMP
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2013-05-27
Authors: Padilla, A., Labesse, G., Kaminski, P.A.
PDB entry 4kxm: Crystal structure of DNPH1 (RCL) WITH N6-ISOPENTENYL-AMP
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2013-05-27
Authors: Padilla, A., Labesse, G., Kaminski, P.A.
PDB entry 4kxn: Crystal structure of DNPH1 (RCL) with kinetine riboside monophosphate
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-05-27
Authors: Padilla, A., Labesse, G., Kaminski, P.A.
PDB entry 4kxo: Crystal Structure of BBBB at pH 10.0 with MPD as the cryoprotectant
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-05-27
Authors: Johal, A.R., Blackler, R.J., Alfaro, J.A., Schuman, B., Borisova, S.N., Evans, S.V.
PDB entry 4kxp: Crystal Structure of AMP complexes of Porcine Liver Fructose-1,6-bisphosphatase Mutant I10D in T-state
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-05-27
Authors: Iancu, C.V., Mukund, S., Choe, J.-Y., Fromm, H.J., Honzatko, R.B.
PDB entry 4kxq: Structure of NAD-dependent protein deacetylase sirtuin-1 (closed state, 1.85 A)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.849 Å
Deposited: 2013-05-27
Authors: Davenport, A.M., Huber, F.M., Hoelz, A.
PDB entry 4kxr: Structure of the Mycobacterium tuberculosis type VII secretion system chaperone EspG5 in complex with PE25-PPE41 dimer
Classification: PROTEIN TRANSPORT
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-05-27
Authors: Korotkova, N., Creekmore, C.C., Korotkov, K.V.
PDB entry 4kxt: Structure of human ARGONAUTE1 in complex with guide RNA
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; Spodoptera frugiperda
Experimental method: X-RAY DIFFRACTION
Resolution: 2.294 Å
Deposited: 2013-05-28
Authors: Nakanishi, K., Patel, D.J.
PDB entry 4kxu: Human transketolase in covalent complex with donor ketose D-fructose-6-phosphate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.98 Å
Deposited: 2013-05-28
Authors: Neumann, P., Luedtke, S., Ficner, R., Tittmann, K.
PDB entry 4kxv: Human transketolase in covalent complex with donor ketose D-xylulose-5-phosphate, crystal 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2013-05-28
Authors: Neumann, P., Luedtke, S., Ficner, R., Tittmann, K.
PDB entry 4kxw: Human transketolase in covalent complex with donor ketose D-xylulose-5-phosphate, crystal 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2013-05-28
Authors: Neumann, P., Luedtke, S., Ficner, R., Tittmann, K.
PDB entry 4kxx: Human transketolase in covalent complex with donor ketose D-sedoheptulose-7-phosphate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2013-05-28
Authors: Neumann, P., Luedtke, S., Ficner, R., Tittmann, K.
PDB entry 4kxy: Human transketolase in complex with ThDP analogue (R)-2-(1,2-dihydroxyethyl)-3-deaza-ThDP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2013-05-28
Authors: Neumann, P., Luedtke, S., Erixon, K.M., Leeper, F., Kluger, R., Ficner, R., Tittmann, K.
PDB entry 4kxz: crystal structure of tgfb2 in complex with GC2008.
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2013-05-28
Authors: Mathieu, M., Moulin, A.G., Wei, R.
PDB entry 4ky0: Crystal structure of a substrate-free glutamate transporter homologue from Thermococcus kodakarensis
Classification: TRANSPORT PROTEIN, membrane protein
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-05-28
Authors: Guskov, A., Jensen, S., Rempel, S., Hanelt, I., Slotboom, D.J.
PDB entry 4ky1: humanized HP1/2 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2013-05-28
Authors: Arndt, J.W., Hanf, K.J.M., Lugovskoy, A., Chen, L.L., Jarpe, M., Boriack-Sjodin, A., Li, Y., van Vlijmen, H., Pepinsky, B., Taylor, F., Silvian, L., Taveras, A.
PDB entry 4ky2: Transthyretin in complex with the fluorescent folding sensor (E)-7-hydroxy-3-(4-hydroxy-3,5-dimethylstyryl)-4-methyl-2H-chromen-2-one
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2013-05-28
Authors: Connelly, S., Wilson, I.A., Choi, S.
PDB entry 4ky3: Three-dimensional Structure of the orthorhombic crystal of computationally designed insertion domain , Northeast Structural Genomics Consortium (NESG) Target OR327
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.964 Å
Deposited: 2013-05-28
Authors: Kuzin, A., Su, M., Seetharaman, J., Maglaqui, M., Xiao, R., Lee, D., Gleixner, J., Baker, D., Everett, J.K., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 4ky4: Crystal structure of non-classical TS inhibitor 2 in complex with Toxoplasma gondii TS-DHFR
Classification: OXIDOREDUCTASE, TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2013-05-28
Authors: Sharma, H., Anderson, K.S.
PDB entry 4ky5: Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D at pH 7 and cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-05-28
Authors: Robinson, A.C., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4ky6: Crystal structure of Staphylococcal nuclease variant Delta+PHS L25D at pH 6 and cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-05-28
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 4ky7: Crystal structure of Staphylococcal nuclease variant Delta+PHS V74D at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-05-28
Authors: Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 4ky8: Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, methotrexate, FdUMP and 4-((2-amino-6-methyl-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)thio)-2-chlorophenyl)-L-glutamic acid
Classification: TRANSFERASE,OXIDOREDUCTASE/INHIBITOR
Source organism: Cryptosporidium hominis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.084 Å
Deposited: 2013-05-28
Authors: Kumar, V.P., Anderson, K.S.
PDB entry 4ky9: Structural and Functional Analysis of a Putative Substrate Access Tunnel in the Cytosolic Domain of Human Anion Exchanger 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2013-05-28
Authors: Shnitsar, V., Calmettes, C., Reithmeier, R.A.F., Moraes, T.F.
PDB entry 4kya: Crystal structure of non-classical TS inhibitor 3 in complex with Toxoplasma gondii TS-DHFR
Classification: OXIDOREDUCTASE, TRANSFERASE/INHIBITOR
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.263 Å
Deposited: 2013-05-28
Authors: Sharma, H., Anderson, K.S.
PDB entry 4kyb: Crystal Structure of de novo designed serine hydrolase OSH55.14_E3, Northeast Structural Genomics Consortium Target OR342
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.909 Å
Deposited: 2013-05-28
Authors: Kuzin, A., Lew, S., Rajagopalan, S., Seetharaman, J., Mao, L., Xiao, R., Lee, D., Raja, S., Everett, J.K., Acton, T.B., Baker, D., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 4kyc: Structure of the C-terminal domain of the Menangle virus phosphoprotein, fused to MBP.
Classification: binding protein, viral protein
Source organism: Escherichia coli; Menangle virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-05-28
Authors: Yegambaram, K., Bulloch, E.M.M., Kingston, R.L.
PDB entry 4kyd: Partial Structure of the C-terminal domain of the HPIV4B phosphoprotein, fused to MBP.
Classification: binding protein, viral protein
Source organism: Escherichia coli; Human parainfluenza virus 4b
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2013-05-28
Authors: Yegambaram, K., Bulloch, E.M.M., Kingston, R.L.
PDB entry 4kye: Partial Structure of the C-terminal domain of the HPIV4B phosphoprotein, fused to MBP.
Classification: binding protein, viral protein
Source organism: Escherichia coli; Human parainfluenza virus 4b
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-05-28
Authors: Yegambaram, K., Bulloch, E.M.M., Kingston, R.L.
PDB entry 4kyh: Crystal structure of mouse glyoxalase I complexed with zopolrestat
Classification: LYASE/LYASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-05-29
Authors: Zhai, J., Yuan, M., Zhang, L., Chen, Y., Zhang, H., Chen, S., Zhao, Y.
PDB entry 4kyi: Crystal structure of the phospholipase VipD from Legionella pneumophila in complex with the human GTPase Rab5
Classification: protein binding/transport protein
Source organism: Homo sapiens; Legionella pneumophila subsp. pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 3.075 Å
Deposited: 2013-05-29
Authors: Lucas, M., Gaspar, A.H., Pallara, C., Rojas, A.L., Fernandez-Recio, J., Machner, M.P., Hierro, A.
PDB entry 4kyk: Crystal structure of mouse glyoxalase I complexed with indomethacin
Classification: LYASE/LYASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-05-29
Authors: Zhai, J., Yuan, M., Zhang, L., Chen, Y., Zhang, H., Chen, S., Zhao, Y.
PDB entry 4kyn: Crystal structure of odorant binding protein 48 from Anopheles gambiae at 3.3 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Anopheles gambiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2013-05-29
Authors: Tsitsanou, K.E., Drakou, C.E., Zographos, S.E.
PDB entry 4kyo: Alanine-glyoxylate aminotransferase variant K390A in complex with the TPR domain of human Pex5p
Classification: TRANSFERASE/TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-05-29
Authors: Fodor, K., Lou, Y., Wilmanns, M.
PDB entry 4kyp: Beta-Scorpion Toxin folded in the periplasm of E.coli
Classification: TOXIN
Source organism: Hottentotta judaicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-05-29
Authors: O'Reilly, A.O., Cole, A.R., Lopes, J.L., Lampert, A., Wallace, B.A.
PDB entry 4kyq: Structure of a product bound plant phosphatase
Classification: HYDROLASE, SUGAR BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2013-05-29
Authors: Meekins, D.A., Guo, H.-F., Husodo, S., Paasch, B.C., Bridges, T.M., Santelia, D., Kotting, O., Vander Kooi, C.W., Gentry, M.S.
PDB entry 4kyr: Structure of a product bound plant phosphatase
Classification: HYDROLASE, SUGAR BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-05-29
Authors: Meekins, D.A., Guo, H.-F., Husodo, S., Paasch, B.C., Bridges, T.M., Santelia, D., Kotting, O., Vander Kooi, C.W., Gentry, M.S.
PDB entry 4kys: Clostridium botulinum thiaminase I in complex with thiamin
Classification: TRANSFERASE
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2013-05-29
Authors: Sikowitz, M.D., Shome, B., Zhang, Y., Begley, T.P., Ealick, S.E.
PDB entry 4kyt: The structure of superinhibitory phospholamban bound to the calcium pump SERCA1a
Classification: MEMBRANE PROTEIN
Source organism: Canis lupus familiaris; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.833 Å
Deposited: 2013-05-29
Authors: Hurley, T.D., Akin, B.L., Jones, L.R.
PDB entry 4kyv: Crystal Structure of dehalogenase HaloTag2 with HALTS at the resolution 1.8A. Northeast Structural Genomics Consortium (NESG) Target OR150
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.796 Å
Deposited: 2013-05-29
Authors: Kuzin, A., Lew, S., Seetharaman, J., Maglaqui, M., Xiao, R., Kohan, E., Wang, H., Everett, J.K., Acton, T.B., Kornhaber, G., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 4kyw: Restriction endonuclease DPNI in complex with two DNA molecules
Classification: HYDROLASE/DNA
Source organism: Streptococcus pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-05-29
Authors: Mierzejewska, K., Siwek, W., Czapinska, H., Skowronek, K., Bujnicki, J.M., Bochtler, M.
PDB entry 4kyx: Crystal structure of ADP-ribose pyrophosphatase MutT from Rickettsia felis
Classification: HYDROLASE
Source organism: Rickettsia felis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4kyy: Crystal Structure of RNA 17-mer UUCGGUUUUGAUCCGGA duplex
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2013-05-29
Authors: Smith, P.C., Shuman, S.
PDB entry 4kyz: Three-dimensional structure of triclinic form of de novo design insertion domain, Northeast Structural Genomics Consortium (NESG) Target OR327
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.492 Å
Deposited: 2013-05-29
Authors: Kuzin, A., Su, M., Seetharaman, J., Maglaqui, M., Xiao, R., Lee, D., Gleixner, J., Baker, D., Everett, J.K., Acton, T.B., Kornhaber, G., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 4kz0: Structure of PI3K gamma with Imidazopyridine inhibitors
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2013-05-29
Authors: Knapp, M.S., Elling, R.A.
PDB entry 4kz1: Crystal structure of the soluble domain of VirB8 from Bartonella grahamii
Classification: PROTEIN TRANSPORT
Source organism: Bartonella grahamii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2013-05-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4kz2: Crystal Structure of phi29 pRNA 3WJ Core
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2013-05-29
Authors: Zhang, H., Endrizzi, J.A., Shu, Y., Haque, F., Sauter, C., Guo, P., Chi, Y.-I.
PDB entry 4kz3: Crystal structure of AmpC beta-lactamase in complex with fragment 44 (5-chloro-3-sulfamoylthiophene-2-carboxylic acid)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2013-05-29
Authors: Eidam, O., Barelier, S., Fish, I., Shoichet, B.K.
PDB entry 4kz4: Crystal structure of AmpC beta-lactamase in complex with fragment 60 (2-[(propylsulfonyl)amino]benzoic acid)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2013-05-29
Authors: Eidam, O., Barelier, S., Fish, I., Shoichet, B.K.
PDB entry 4kz5: Crystal structure of AmpC beta-lactamase in complex with fragment 5 (N-{[3-(2-chlorophenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl}glycine)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-05-29
Authors: Eidam, O., Barelier, S., Fish, I., Shoichet, B.K.
PDB entry 4kz6: Crystal structure of AmpC beta-lactamase in complex with fragment 13 ((2R,6R)-6-methyl-1-(3-sulfanylpropanoyl)piperidine-2-carboxylic acid)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2013-05-29
Authors: Eidam, O., Barelier, S., Fish, I., Shoichet, B.K.
PDB entry 4kz7: Crystal structure of AmpC beta-lactamase in complex with fragment 16 ((1R,4S)-4,7,7-trimethyl-3-oxo-2-oxabicyclo[2.2.1]heptane-1-carboxylic acid)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2013-05-29
Authors: Eidam, O., Barelier, S., Fish, I., Shoichet, B.K.
PDB entry 4kz8: Crystal structure of AmpC beta-lactamase in complex with fragment 20 (1,3-diethyl-2-thioxodihydropyrimidine-4,6(1H,5H)-dione)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.282 Å
Deposited: 2013-05-29
Authors: Eidam, O., Barelier, S., Fish, I., Shoichet, B.K.
PDB entry 4kz9: Crystal structure of AmpC beta-lactamase in complex with fragment 41 ((4R,4aS,8aS)-4-phenyldecahydroquinolin-4-ol)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2013-05-29
Authors: Eidam, O., Barelier, S., Fish, I., Shoichet, B.K.
PDB entry 4kza: Crystal structure of AmpC beta-lactamase in complex with fragment 48 (3-(cyclopropylsulfamoyl)thiophene-2-carboxylic acid)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-05-29
Authors: Eidam, O., Barelier, S., Fish, I., Shoichet, B.K.
PDB entry 4kzb: Crystal structure of AmpC beta-lactamase in complex with fragment 50 (N-(methylsulfonyl)-N-phenyl-alanine)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2013-05-29
Authors: Eidam, O., Barelier, S., Fish, I., Shoichet, B.K.
PDB entry 4kzc: Structure of PI3K gamma with Imidazopyridine inhibitors
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2013-05-29
Authors: Knapp, M.S., Elling, E.A.
PDB entry 4kzd: Crystal structure of an RNA aptamer in complex with fluorophore and Fab
Classification: immune system/rna
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.186 Å
Deposited: 2013-05-29
Authors: Huang, H., Suslov, N.B., Li, N., Koldobskaya, Y., Rice, P.A., Piccirilli, J.A.
PDB entry 4kze: Crystal structure of an RNA aptamer in complex with Fab
Classification: immune system/rna
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.404 Å
Deposited: 2013-05-29
Authors: Huang, H., Suslov, N.B., Li, N., Koldobskaya, Y., Rice, P.A., Piccirilli, J.A.
PDB entry 4kzf: The mechanism of the amidases: The effect of the mutation E142L in the amidase from Geobacillus pallidus
Classification: HYDROLASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-05-29
Authors: Weber, B.W., Sewell, B.T., Kimani, S.W., Varsani, A., Cowan, D.A., Hunter, R.
PDB entry 4kzg: Crystal structure of zebrafish MO25
Classification: SIGNALING PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-05-30
Authors: Zhang, Z.Z., Shi, Z.B., Zhang, M.
PDB entry 4kzi: Crystal Structure of TR3 LBD in complex with DPDO
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2013-05-30
Authors: Li, F., Zhang, Q., Li, A., Tian, X., Cai, Q., Wang, W., Wang, Y., Chen, H., Xing, Y., Wu, Q., Lin, T.
PDB entry 4kzj: Crystal Structure of TR3 LBD L449W Mutant
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2013-05-30
Authors: Li, F., Zhang, Q., Li, A., Tian, X., Cai, Q., Wang, W., Wang, Y., Chen, H., Xing, Y., Wu, Q., Lin, T.
PDB entry 4kzk: The structure of the periplasmic L-arabinose binding protein from Burkholderia thailandensis
Classification: SUGAR BINDING PROTEIN
Source organism: Burkholderia thailandensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-05-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4kzl: Crystal structure of human tankyrase 2 in complex with 4'-fluoro flavone
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-05-30
Authors: Narwal, M., Haikarainen, T., Lehtio, L.
PDB entry 4kzm: Crystal Structure of TR3 LBD S553A Mutant
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-05-30
Authors: Li, F., Zhang, Q., Li, A., Tian, X., Cai, Q., Wang, W., Wang, Y., Chen, H., Xing, Y., Wu, Q., Lin, T.
PDB entry 4kzn: crystal structure of human VEGF-A receptor binding domain
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7114 Å
Deposited: 2013-05-30
Authors: Liaw, Y.C.
PDB entry 4kzo: Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.204 Å
Deposited: 2013-05-30
Authors: Concha, N.O., Smallwood, A.M.
PDB entry 4kzp: Crystal Structure of a Putative Short Chain Dehydrogenase from Mycobacterium smegmatis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2013-05-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4kzq: Crystal structure of human tankyrase 2 in complex with 4' -hydroxy flavone
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-05-30
Authors: Narwal, M., Haikarainen, T., Lehtio, L.
PDB entry 4kzs: Crystal structure of the secreted protein HP1454 from the human pathogen Helicobacter pylori
Classification: UNKNOWN FUNCTION
Source organism: Helicobacter pylori R046Wa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-05-30
Authors: Quarantini, S., Cendron, L., Fischer, W., Zanotti, G.
PDB entry 4kzt: Structure mmNAGS bound with L-arginine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Maricaulis maris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-05-30
Authors: Zhao, G., Jin, Z., Allewell, N.M., Tuchman, M., Shi, D.
PDB entry 4kzu: Crystal structure of human tankyrase 2 in complex with 4' -bromo flavone
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-05-30
Authors: Narwal, M., Haikarainen, T., Lehtio, L.
PDB entry 4kzv: Structure of the carbohydrate-recognition domain of the C-type lectin mincle bound to trehalose
Classification: CARBOHYDRATE-BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-05-30
Authors: Feinberg, H., Jegouzo, S.A.F., Rowntree, T.J.W., Guan, Y., Brash, M.A., Taylor, M.E., Weis, W.I., Drickamer, K.
PDB entry 4kzw: Structure of the carbohydrate-recognition domain of the C-type lectin mincle
Classification: Carbohydrate-binding protein
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-05-30
Authors: Feinberg, H., Jegouzo, S.A.F., Rowntree, T.J.W., Guan, Y., Brash, M.A., Taylor, M.E., Weis, W.I., Drickamer, K.
PDB entry 4kzx: Rabbit 40S ribosomal subunit in complex with eIF1.
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 7.809 Å
Deposited: 2013-05-30
Authors: Lomakin, I.B., Steitz, T.A.
PDB entry 4kzy: Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 7.01 Å
Deposited: 2013-05-30
Authors: Lomakin, I.B., Steitz, T.A.
PDB entry 4kzz: Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
Classification: RIBOSOME
Source organism: Homo sapiens; Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 7.0305 Å
Deposited: 2013-05-30
Authors: Lomakin, I.B., Steitz, T.A.
PDB entry 4l00: Crystal structure of the apo Jak1 pseudokinase domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-30
Authors: Toms, A.V., Eck, M.J.
PDB entry 4l01: Crystal structure of the V658F apo Jak1 pseudokinase domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-05-30
Authors: Toms, A.V., Rogers, J.M., Eck, M.J.
PDB entry 4l02: Crystal Structure of SphK1 with inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2013-05-30
Authors: Min, X., Walker, N., Wang, Z.
PDB entry 4l03: Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-05-30
Authors: Concha, N.O., Smallwood, A.M.
PDB entry 4l04: Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2013-05-30
Authors: Concha, N.O., Smallwood, A.M.
PDB entry 4l05: Cu/Zn superoxide dismutase from Brucella abortus
Classification: OXIDOREDUCTASE
Source organism: Brucella abortus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.098 Å
Deposited: 2013-05-30
Authors: Shin, D.S., Didonato, M., Pratt, A.J., Bruns, C.K., Cabelli, D.E., Kroll, J.S., Belzer, C.A., Tabatabai, L.B., Tainer, J.A., Getzoff, E.D.
PDB entry 4l06: Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.282 Å
Deposited: 2013-05-30
Authors: Concha, N.O., Smallwood, A.M.
PDB entry 4l07: Crystal structure of the maleamate amidase Ami from Pseudomonas putida S16
Classification: HYDROLASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-05-30
Authors: Chen, D.D., Lu, Y., Zhang, Z., Wu, G., Xu, P.
PDB entry 4l08: Crystal structure of the maleamate amidase Ami(C149A) in complex with maleate from Pseudomonas putida S16
Classification: HYDROLASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2013-05-31
Authors: Chen, D.D., Lu, Y., Zhang, Z., Wu, G., Xu, P.
PDB entry 4l09: Crystal structure of human tankyrase 2 in complex with 4-(4-oxo-4H-chromen-2-yl)benzoic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-05-31
Authors: Narwal, M., Haikarainen, T., Lehtio, L.
PDB entry 4l0a: X-ray structure of an all LNA quadruplex
Classification: DNA, RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-05-31
Authors: Russo Krauss, I., Parkinson, G., Merlino, A., Mazzarella, L., Sica, F.
PDB entry 4l0b: Tankyrase 2 in complex with 4'-dimethylamino flavone
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-31
Authors: Narwal, M., Haikarainen, T., Lehtio, L.
PDB entry 4l0c: Crystal structure of the N-Fopmylmaleamic acid deformylase Nfo(S94A) from Pseudomonas putida S16
Classification: HYDROLASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-05-31
Authors: Chen, D., Lu, Y., Zhang, Z., Wu, G., Xu, P.
PDB entry 4l0d: Crystal structure of delta516-525 human cystathionine beta-synthase containing C-terminal 6xHis-tag
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2013-05-31
Authors: Ereno, J., Majtan, T., Oyenarte, I., Kraus, J.P., Martinez-Cruz, L.A.
PDB entry 4l0e: Structure of P450sky (CYP163B3), a cytochrome P450 from skyllamycin biosynthesis (heme-coordinated expression tag)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-05-31
Authors: Cryle, M.J.
PDB entry 4l0f: Structure of P450sky (CYP163B3), a cytochrome P450 from skyllamycin biosynthesis (open active site)
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-05-31
Authors: Cryle, M.J.
PDB entry 4l0g: Crystal Structure of a GH48 cellobiohydrolase from Caldicellulosiruptor bescii
Classification: HYDROLASE
Source organism: Caldicellulosiruptor bescii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-05-31
Authors: Jiao, A., Bai, A., Yan, F., Geng, W.
PDB entry 4l0i: Tankyrase 2 catalytic domain in complex with ethyl 4-(4-oxo-4H-chromen-2-yl)benzoate
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-05-31
Authors: Narwal, M., Haikarainen, T., Lehtio, L.
PDB entry 4l0j: Structure of a translocation signal domain mediating conjugative transfer by type IV secretion systems
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-05-31
Authors: Redzej, A., Ilangovan, A., Lang, S., Gruber, C.J., Topf, M., Zangger, K., Zechner, E.L., Waksman, G.
PDB entry 4l0k: Crystal structure of a type II restriction endonuclease
Classification: HYDROLASE
Source organism: Deinococcus radiophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.328 Å
Deposited: 2013-05-31
Authors: Zhuo, W., Ge, J., Yang, M.
PDB entry 4l0l: Crystal structure of P.aeruginosa PBP3 in complex with compound 4
Classification: Penicillin Binding Protein/Antibiotic
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-05-31
Authors: Han, S., Marr, E.S.
PDB entry 4l0m: Crystal structure of a putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Borrelia burgdorferi B31 bound to Adenine (Target NYSGRC-029268 )
Classification: HYDROLASE
Source organism: Borrelia burgdorferi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-05-31
Authors: Sampathkumar, P., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4l0n: Crystal structure of STK3 (MST2) SARAH domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-05-31
Authors: Chaikuad, A., Krojer, T., Newman, J.A., Dixon-Clarke, S., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 4l0o: Structure determination of cystathionine gamma-synthase from Helicobacter pylori
Classification: LYASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2013-05-31
Authors: Tarique, K.F., Rehman, S.A.A., Gourinath, S.