LiteFold/PDB huggingface dataset:
PDB entry 7lol: The structure of Agmatinase from E. Coli at 1.8 A displaying urea and agmatine
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-10
Authors: Maturana, P., Figueroa, M., Gonzalez-Ordenes, F., Villalobos, P., Martinez-Oyanedel, J., Uribe, E.A., Castro-Fernandez, V.
PDB entry 7lom: Ornithine Aminotransferase (OAT) soaked with its inactivator - (1S,3S)-3-amino-4-(difluoromethylene)cyclohexene-1-carboxylic acid
Classification: TRANSFERASE/Inactivator
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-10
Authors: Butrin, A., Zhu, W., Liu, D., Silverman, R.
PDB entry 7lon: Ornithine Aminotransferase (OAT) cocrystallized with its inactivator - (1S,3S)-3-amino-4-(difluoromethylene)cyclohexene-1-carboxylic acid
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-10
Authors: Butrin, A., Zhu, W., Liu, D., Silverman, R.
PDB entry 7loo: S-adenosyl methionine transferase cocrystallized with ATP
Classification: TRANSFERASE
Source organism: Escherichia coli 908573
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-10
Authors: Jackson, C.J., Tan, L.L., Laurino, P.
PDB entry 7lop: Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CV05-163 and CR3022
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.246 Å
Deposited: 2021-02-10
Authors: Yuan, M., Zhu, X., Wilson, I.A.
PDB entry 7loq: X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-02-10
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lor: X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 3
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2021-02-10
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7los: SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-65
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-02-10
Authors: Ratia, K.M., Xiong, R., Thatcher, G.R.
PDB entry 7lot: Human PPAR Gamma LBD in Complex with Tetrazole Compound N-{3-[(4-methylbenzyl)oxy]benzyl}-2H-tetrazol-5-amine.
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2021-02-10
Authors: de Paula, K., Nascimento, A.S.
PDB entry 7lou: Crystal structure of Clostridium difficile Toxin B (TcdB) glucosyltransferase in complex with UDP and isofagomine
Classification: TRANSFERASE/Inhibitor
Source organism: Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2021-02-10
Authors: Harijan, R.K., Paparella, A.S., Aboulache, B.L., Bonanno, J.B., Almo, S.C., Schramm, V.L.
PDB entry 7lov: Crystal structure of Clostridium difficile Toxin B (TcdB) glucosyltransferase in complex with UDP and noeuromycin
Classification: TRANSFERASE/Inhibitor
Source organism: Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-10
Authors: Harijan, R.K., Paparella, A.S., Aboulache, B.L., Bonanno, J.B., Almo, S.C., Schramm, V.L.
PDB entry 7low: S-adenosylmethionine synthetase
Classification: TRANSFERASE
Source organism: Escherichia coli 908573
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-02-10
Authors: Tan, L.L., Jackson, C.J.
PDB entry 7lox: The structure of Agmatinase from E. Coli at 3.2 A displaying guanidine in the active site
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-02-11
Authors: Maturana, P., Figueroa, M., Gonzalez-Ordenes, F., Villalobos, P., Martinez-Oyanedel, J., Uribe, E.A., Castro-Fernandez, V.
PDB entry 7loy: Dihydrodipicolinate synthase with pyruvate from Candidatus Liberibacter solanacearum
Classification: LYASE
Source organism: Candidatus Liberibacter solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-02-11
Authors: Gilkes, J.M., Frampton, R.A., Board, A., Sheen, C.R., Smith, G.R., Dobson, R.C.J.
PDB entry 7loz: S-adenosylmethionine synthetase
Classification: TRANSFERASE
Source organism: Escherichia coli 908573
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-02-11
Authors: Tan, L.L., Jackson, C.J.
PDB entry 7lp0: Crystal structure of BPTF bromodomain in complex with inhibitor Pdy-3-077
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2021-02-11
Authors: Chan, A., Schonbrunn, E.
PDB entry 7lp1: Structure of Nedd4L WW3 domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2021-02-11
Authors: Alian, A., Alam, S.L., Thompson, T., Rheinemann, L., Sundquist, W.I.
PDB entry 7lp2: Structure of Nedd4L WW3 domain
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2021-02-11
Authors: Alian, A., Alam, S.L., Thompson, T., Rheinemann, L., Sundquist, W.I.
PDB entry 7lp3: Structure of Nedd4L WW3 domain
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2021-02-11
Authors: Alian, A., Alam, S.L., Thompson, T., Rheinemann, L., Sundquist, W.I.
PDB entry 7lp4: Structure of Nedd4L WW3 domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-02-11
Authors: Alam, S.L., Alian, A., Thompson, T., Rheinemann, L., Volkman, B.F., Peterson, F.C., Sundquist, W.I.
PDB entry 7lp5: Structure of Nedd4L WW3 domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-02-11
Authors: Alam, S.L., Alian, A., Thompson, T., Rheinemann, L., Volkman, B.F., Peterson, F.C., Sundquist, W.I.
PDB entry 7lp6: X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 2 (merged)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2021-02-11
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lp7: The crystal structure of the wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000983476
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Luxembourg/43/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-11
Authors: Cuypers, M.G., Slavish, P.J., Rankovic, Z., White, S.W.
PDB entry 7lp8: The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000983476
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Luxembourg/43/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-02-11
Authors: Cuypers, M.G., Slavish, P.J., Rankovic, Z., White, S.W.
PDB entry 7lp9: Cryo-EM structure of full-length TRPV1 at 4 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2021-02-11
Authors: Kwon, D.H., Zhang, F., Suo, Y., Lee, S.-Y.
PDB entry 7lpa: Cryo-EM structure of full-length TRPV1 with capsaicin at 4 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2021-02-11
Authors: Kwon, D.H., Zhang, F., Suo, Y., Lee, S.-Y.
PDB entry 7lpb: Cryo-EM structure of full-length TRPV1 with capsaicin at 25 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2021-02-11
Authors: Kwon, D.H., Zhang, F., Suo, Y., Lee, S.-Y.
PDB entry 7lpc: Cryo-EM structure of full-length TRPV1 at 48 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2021-02-11
Authors: Kwon, D.H., Zhang, F., Suo, Y., Lee, S.-Y.
PDB entry 7lpd: Cryo-EM structure of full-length TRPV1 with capsaicin at 48 degrees Celsius, in an intermediate state, class 2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2021-02-11
Authors: Kwon, D.H., Zhang, F., Suo, Y., Lee, S.-Y.
PDB entry 7lpe: Cryo-EM structure of full-length TRPV1 with capsaicin at 48 degrees Celsius, in an open state, class 1
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2021-02-11
Authors: Kwon, D.H., Zhang, F., Suo, Y., Lee, S.-Y.
PDB entry 7lpf: The internal aldimine form of the wild-type Salmonella typhimurium Tryptophan Synthase in complex with inhibitor N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the enzyme alpha-site and sodium ion at the metal coordination site at 1.10 Angstrom resolution
Classification: LYASE/LYASE INHIBITOR
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2021-02-11
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7lpg: APE1 product complex with abasic ribonucleotide DNA
Classification: LYASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2021-02-11
Authors: Freudenthal, B.D., Hoitsma, N.M.
PDB entry 7lph: APE1 Mn-bound product complex with abasic ribonucleotide DNA
Classification: LYASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-02-11
Authors: Freudenthal, B.D., Hoitsma, N.M.
PDB entry 7lpi: APE1 phosphorothioate substrate complex with abasic ribonucleotide DNA
Classification: LYASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-02-11
Authors: Freudenthal, B.D., Hoitsma, N.M.
PDB entry 7lpj: APE1 Mn-bound phosphorothioate substrate complex with abasic ribonucleotide DNA
Classification: LYASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2021-02-11
Authors: Freudenthal, B.D., Hoitsma, N.M.
PDB entry 7lpk: Crystal structure of BPTF bromodomain in complex with inhibitor HZ-03-112
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2021-02-12
Authors: Chan, A., Schonbrunn, E.
PDB entry 7lpl: X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 3 (merged)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2021-02-12
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lpm: X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, crystal 2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2021-02-12
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lpn: Cryo-EM structure of llama J3 VHH antibody in complex with HIV-1 Env BG505 DS-SOSIP.664
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2021-02-12
Authors: Gorman, J., Kwong, P.D.
PDB entry 7lpo: Crystal structure of Cryptococcus neoformans sterylglucosidase 1 with tris
Classification: HYDROLASE
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2021-02-12
Authors: Pereira de Sa, N., Del Poeta, M., Airola, M.V.
PDB entry 7lpp: Crystal structure of Cryptococcus neoformans sterylglucosidase 1 with hit 1
Classification: HYDROLASE
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-02-12
Authors: Pereira de Sa, N., Del Poeta, M., Airola, M.V.
PDB entry 7lpq: Crystal structure of Cryptococcus neoformans sterylglucosidase 1 with hit 9
Classification: HYDROLASE
Source organism: Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2021-02-12
Authors: Pereira de Sa, N., Del Poeta, M., Airola, M.V.
PDB entry 7lpr: STRUCTURAL BASIS FOR BROAD SPECIFICITY IN ALPHA-LYTIC PROTEASE MUTANTS
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Lysobacter enzymogenes; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 1991-08-05
Authors: Fujishige, A., Bone, R., Agard, D.A.
PDB entry 7lps: Crystal structure of DDB1-CRBN-ALV1 complex bound to Helios (IKZF2 ZF2)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.78 Å
Deposited: 2021-02-12
Authors: Nowak, R.P., Fischer, E.S.
PDB entry 7lpt: X-ray radiation damage series on Proteinase K at 277K, crystal structure, dataset 4
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2021-02-12
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lpu: X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 1
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2021-02-12
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lpv: X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 2
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2021-02-12
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lpw: Crystal Structure of HIV-1 RT in Complex with NBD-14189
Classification: TRANSFERASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2021-02-12
Authors: Losada, N., Ruiz, F.X., Arnold, E.
PDB entry 7lpx: Crystal Structure of HIV-1 RT in Complex with NBD-14270
Classification: TRANSFERASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-02-12
Authors: Losada, N., Ruiz, F.X., Arnold, E.
PDB entry 7lpy: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-02-12
Authors: Thapar, R., Andrew, A.S., Tainer, J.A.
PDB entry 7lpz: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-02-12
Authors: Thapar, R., Andrew, A.S., Tainer, J.A.
PDB entry 7lq0: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-02-12
Authors: Thapar, R., Andrew, A.S., Tainer, J.A.
PDB entry 7lq1: HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 28
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2021-02-12
Authors: Lesburg, C.A., Augustin, M.
PDB entry 7lq2: Apo Rr RsiG- crystal form 1
Classification: TRANSCRIPTION
Source organism: Rubrobacter radiotolerans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-02-12
Authors: Schumacher, M.A., Brennan, R.G.
PDB entry 7lq3: Evolution of a sigma-(c-di-GMP)-antisigma switch
Classification: TRANSCRIPTION
Source organism: Rubrobacter radiotolerans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-02-12
Authors: Schumacher, M.A., Brennan, R.G.
PDB entry 7lq4: Rr (RsiG)2-(c-di-GMP)2-WhiG complex
Classification: TRANSCRIPTION
Source organism: Rubrobacter radiotolerans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-02-12
Authors: Schumacher, M.A., Brennan, R.G.
PDB entry 7lq5: Cryo-EM structure of OmcZ nanowire from Geobacter sulfurreducens
Classification: PROTEIN FIBRIL
Source organism: Geobacter sulfurreducens PCA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-02-13
Authors: Gu, Y., Srikanth, V., Malvankar, N.S., Samatey, F.A.
PDB entry 7lq6: CryoEM structure of Escherichia coli PBP1b
Classification: TRANSFERASE, HYDROLASE
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2021-02-13
Authors: Caveney, N.A., Workman, S.D., Yan, R., Atkinson, C.E., Yu, Z., Strynadka, N.C.J.
PDB entry 7lq7: Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CV503 and COVA1-16
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2021-02-13
Authors: Yuan, M., Zhu, X., Wilson, I.A.
PDB entry 7lq8: X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 3
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-02-13
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lq9: X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 4
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2021-02-13
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lqa: X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 2 (merged)
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2021-02-13
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lqb: X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 3 (merged)
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2021-02-13
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lqc: X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 4 (merged)
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2021-02-13
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lqd: Structure of Human MPS1 (TTK) covalently bound to RMS-07 inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-13
Authors: Santiago, A.S., dos Reis, C.V., Serafim, R.A.M., Massirer, K.B., Arruda, P., Edwards, A.M., Counago, R.M., Structural Genomics Consortium (SGC)
PDB entry 7lqe: Cryo-EM of 1-protofilament of the KFE8 thinner nanotube
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-02-13
Authors: Wang, F., Gnewou, O.M., Egelman, E.H., Conticello, V.P.
PDB entry 7lqf: Cryo-EM of KFE8 ribbon filament
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-02-13
Authors: Wang, F., Gnewou, O.M., Egelman, E.H., Conticello, V.P.
PDB entry 7lqg: Cryo-EM of the KFE8 thinner nanotube (class 1, C2)
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-02-13
Authors: Wang, F., Gnewou, O.M., Egelman, E.H., Conticello, V.P.
PDB entry 7lqh: Cryo-EM of KFE8 thinner nanotube (class 2, 2-sub-1)
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-02-13
Authors: Wang, F., Gnewou, O.M., Egelman, E.H., Conticello, V.P.
PDB entry 7lqi: Cryo-EM of KFE8 thicker nanotube
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-02-13
Authors: Wang, F., Gnewou, O.M., Egelman, E.H., Conticello, V.P.
PDB entry 7lqj: Crystal structure of LeuT bound to L-Alanine
Classification: TRANSPORT PROTEIN
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.144 Å
Deposited: 2021-02-13
Authors: Font, J., Aguilar, J., Galli, A., Ryan, R.
PDB entry 7lqk: Crystal structure of the R375A mutant of LeuT
Classification: TRANSPORT PROTEIN
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-13
Authors: Font, J., Aguilar, J., Galli, A., Ryan, R.
PDB entry 7lql: Crystal structure of the R375D mutant of LeuT
Classification: TRANSPORT PROTEIN
Source organism: Aquifex aeolicus (strain VF5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-02-13
Authors: Font, J., Aguilar, J., Galli, A., Ryan, R.
PDB entry 7lqm: Glucosamie-6-phosphate Deaminase from Pasturella multocida
Classification: HYDROLASE
Source organism: Pasteurella multocida (strain Pm70)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-14
Authors: Subramanian, R., Srinivasachari, S.
PDB entry 7lqn: Glucosamine-6-phosphate Deaminase from H. influenzae
Classification: HYDROLASE
Source organism: Haemophilus influenzae (strain 86-028NP)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-02-14
Authors: Subramanian, R., Srinivasachari, S.
PDB entry 7lqo: Crystal structure of a genetically encoded red fluorescent peroxynitrite biosensor, pnRFP
Classification: FLUORESCENT PROTEIN
Source organism: Discosoma sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-14
Authors: Huang, M., Ng, H.L., Pang, Y., Zhang, S., Fan, Y., Yeh, H., Xiong, Y., Li, X., Ai, H.
PDB entry 7lqp: Rapid development of potent inhibitors of the HIV integrase-LEDGF interaction by fragment-linking using off-rate screening
Classification: TRANSFERASE/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2021-02-15
Authors: Gorman, M.A., Parker, M.W.
PDB entry 7lqr: Structure of conotoxin CIC
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2021-02-15
Authors: Evans, E.R.J., Daly, N.L.
PDB entry 7lqs: Structure of truncated conotoxin CIC
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2021-02-15
Authors: Evans, E.R.J., Daly, N.L.
PDB entry 7lqt: Solution NMR structure of the PNUTS amino-terminal Domain fused to Myc Homology Box 0
Classification: NUCLEAR PROTEIN
Source organism: Rattus norvegicus
Experimental method: SOLUTION NMR
Deposited: 2021-02-15
Authors: Lemak, A., Wei, Y., Duan, S., Houliston, S., Penn, L.Z., Arrowsmith, C.H.
PDB entry 7lqu: Crystal Structure of HIV-1 RT in Complex with NBD-14075
Classification: TRANSFERASE/INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-02-15
Authors: Losada, N., Ruiz, F.X., Gruber, K., Das, K., Arnold, E.
PDB entry 7lqv: Cryo-EM structure of NTD-directed neutralizing antibody 4-8 Fab in complex with SARS-CoV-2 S2P spike
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2021-02-15
Authors: Gorman, J., Rapp, M., Kwong, P.D., Shapiro, L.
PDB entry 7lqw: Cryo-EM structure of NTD-directed neutralizing antibody 2-17 Fab in complex with SARS-CoV-2 S2P spike
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.47 Å
Deposited: 2021-02-15
Authors: Gorman, J., Rapp, M., Kwong, P.D., Shapiro, L.
PDB entry 7lqx: Crystal structure of a GH5_18 from Bifidobacterium longum subsp. infantis
Classification: HYDROLASE
Source organism: Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-02-15
Authors: Higgins, M.A., Ryan, K.S.
PDB entry 7lqy: Structure of squirrel TRPV1 in apo state
Classification: MEMBRANE PROTEIN
Source organism: Ictidomys tridecemlineatus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2021-02-15
Authors: Nadezhdin, K.D., Neuberger, A., Sobolevsky, A.I.
PDB entry 7lqz: Structure of squirrel TRPV1 in complex with RTX
Classification: MEMBRANE PROTEIN
Source organism: Ictidomys tridecemlineatus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2021-02-15
Authors: Neuberger, A., Nadezhdin, K.D., Sobolevsky, A.I.
PDB entry 7lr0: Structure of squirrel TRPV1 in complex with capsaicin
Classification: MEMBRANE PROTEIN
Source organism: Ictidomys tridecemlineatus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.81 Å
Deposited: 2021-02-15
Authors: Neuberger, A., Nadezhdin, K.D., Sobolevsky, A.I.
PDB entry 7lr1: Crystal structure of GH5_18 from Bifidobacterium longum subsp. longum ATCC 55813
Classification: HYDROLASE
Source organism: Bifidobacterium longum subsp. longum ATCC 55813
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-15
Authors: Higgins, M.A., Ryan, K.S.
PDB entry 7lr2: Crystal structure of GH5_18 from Bifidobacterium longum subsp. longum ATCC 55813 in complex with GlcNAc
Classification: HYDROLASE
Source organism: Bifidobacterium longum subsp. longum ATCC 55813
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-02-15
Authors: Higgins, M.A., Ryan, K.S.
PDB entry 7lr3: Complex of Fab 2/6.14 with domain 3 of P. berghei HAP2
Classification: SURFACTANT PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Plasmodium berghei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-02-15
Authors: Feng, J., Dong, X.C., Lu, C.F., Springer, T.A.
PDB entry 7lr4: Complex of Fab 2/1.12 with domain 3 of P. berghei HAP2
Classification: CELL ADHESION/IMMUNE SYSTEM
Source organism: Mus musculus; Plasmodium berghei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-15
Authors: Feng, J., Dong, X.C., Su, Y., Lu, X.F., Springer, T.A.
PDB entry 7lr5: Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Ni(II) (M1) and Cu(II) (M2)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-02-15
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lr6: Crystal structure of GH5_18-E140A from Bifidobacterium longum subsp. longum ATCC 55813 in complex with Manb1-4GlcNAc
Classification: HYDROLASE
Source organism: Bifidobacterium longum subsp. longum ATCC 55813
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-16
Authors: Higgins, M.A., Ryan, K.S.
PDB entry 7lr7: Crystal structure of GH5_18 from Streptomyces cattleya in complex with GlcNAc
Classification: HYDROLASE
Source organism: Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-16
Authors: Higgins, M.A., Ryan, K.S.
PDB entry 7lr8: Crystal structure of GH5_18-E153A from Streptomyces cattleya in complex with Manb1-4GlcNAc
Classification: HYDROLASE
Source organism: Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-02-16
Authors: Higgins, M.A., Ryan, K.S.
PDB entry 7lr9: Crystal structure of KPC-2 S70G/T215P mutant with hydrolyzed imipenem
Classification: HYDROLASE/ANTIBIOTIC
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2021-02-16
Authors: Furey, I., Palzkill, T., Hu, L., Prasad, B.V.V.
PDB entry 7lra: Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Cu(II) (M1) and Ni(II) (M2)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-02-16
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lrb: Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Ni(II) (M1) and Cu(II) (M2)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2021-02-16
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lrc: Cryo-EM of the SLFN12-PDE3A complex: PDE3A body refinement
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2021-02-16
Authors: Fuller, J.R., Garvie, C.W., Lemke, C.T.
PDB entry 7lrd: Cryo-EM of the SLFN12-PDE3A complex: Consensus subset model
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2021-02-16
Authors: Fuller, J.R., Garvie, C.W., Lemke, C.T.
PDB entry 7lre: Cryo-EM of the SLFN12-PDE3A complex: SLFN12 body refinement
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2021-02-16
Authors: Fuller, J.R., Garvie, C.W., Lemke, C.T.
PDB entry 7lrf: Netrin-1 in complex with SOS
Classification: SIGNALING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2021-02-16
Authors: Gupta, M., McDougall, M., Torres, A.M., Stetefeld, J.
PDB entry 7lrg: Filamentous actin decorated with human cardiac myosin binding protein C C2 domain
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2021-02-16
Authors: Galkin, V.E.
PDB entry 7lrh: C-terminal domain of RibD from Brucella abortus (5-amino-6-ribosylamino-2,4(1H,3H)-pyrimidinedione 5'-phosphate reductase)
Classification: OXIDOREDUCTASE
Source organism: Brucella abortus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-02-16
Authors: Bonomi, H.R., Cerutti, M.L., Posadas, D.M., Goldbaum, F.A., Klinke, S.
PDB entry 7lri: Structure of HIV-1 Reverse Transcriptase in complex with DNA, dTTP, and CA(2+) ion
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2021-02-16
Authors: Hoang, A., Ruiz, F.X., Arnold, E.
PDB entry 7lrk: Crystal structure of BPTF bromodomain in complex with inhibitor Pdy-3-093
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2021-02-16
Authors: Chan, A., Schonbrunn, E.
PDB entry 7lrl: Co-complex CYP46A1 with 7742 (Soticlestat/TAK-935))
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.995 Å
Deposited: 2021-02-16
Authors: Lane, W., Yano, J.
PDB entry 7lrm: Structure of HIV-1 Reverse Transcriptase in complex with DNA, dCTP, and CA(2+) ion
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2021-02-16
Authors: Hoang, A., Ruiz, F.X., Arnold, E.
PDB entry 7lrn: Structure of the Siderophore Interacting Protein from Acinetbacter baumannii
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-02-16
Authors: Tanner, J.J., Korasick, D.A.
PDB entry 7lro: Crystal structure of BPTF bromodomain in complex with inhibitor HZ-01-105
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-02-17
Authors: Chan, A., Schonbrunn, E.
PDB entry 7lrq: Crystal structure of human SFPQ/NONO heterodimer, conserved DBHS region
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-17
Authors: Marshall, A.C., Bond, C.S., Mohnen, I.
PDB entry 7lrr: Co-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Cu(II) (M1) and Co(II) (M2)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2021-02-17
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lrs: Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody A23-58.1 that targets the receptor-binding domain
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2021-02-17
Authors: Zhou, T., Tsybovsky, Y.
PDB entry 7lrt: Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody A23-58.1 that targets the receptor-binding domain
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2021-02-17
Authors: Zhou, T., Tsybovsky, T.
PDB entry 7lru: Crystal structure of SFPQ-NONO-SFPQ chimeric protein homodimer
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-02-17
Authors: Marshall, A.C., Bond, C.S., Mohnen, I., Knott, G.J.
PDB entry 7lrv: Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Ni(II)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-02-17
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lrw: Structure of Hact-2
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2021-02-17
Authors: Schmidt, C.A., Daly, N.L.
PDB entry 7lrx: Structure of HIV-1 Reverse Transcriptase in complex with DNA, L-dCTP, and CA(2+) ion
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-02-17
Authors: Hoang, A., Ruiz, F.X., Arnold, E.
PDB entry 7lry: Structure of HIV-1 Reverse Transcriptase in complex with DNA, (-)FTC-TP, and CA(2+) ion
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-02-17
Authors: Hoang, A., Ruiz, F.X., Arnold, E.
PDB entry 7lrz: Structure of the Human ALK GRD
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2021-02-17
Authors: Stayrook, S., Li, T., Klein, D.E.
PDB entry 7ls0: Structure of the Human ALK GRD bound to AUG
Classification: TRANSFERASE/TRANSFERASE ACTIVATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2021-02-17
Authors: Stayrook, S., Li, T., Klein, D.E.
PDB entry 7ls1: 80S ribosome from mouse bound to eEF2 (Class II)
Classification: RIBOSOME
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-02-17
Authors: Loerch, S., Smith, P.R., Kunder, N., Stanowick, A.D., Lou, T.-F., Campbell, Z.T.
PDB entry 7ls2: 80S ribosome from mouse bound to eEF2 (Class I)
Classification: RIBOSOME
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-02-17
Authors: Loerch, S., Smith, P.R., Kunder, N., Stanowick, A.D., Lou, T.-F., Campbell, Z.T.
PDB entry 7ls3: Co-complex CYP46A1 with 8114 (3f)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-02-17
Authors: Lane, W., Yano, J.
PDB entry 7ls4: Co-complex CYP46A1 with 9129 (1b)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-02-17
Authors: Lane, W., Yano, J.
PDB entry 7ls5: Cryo-EM structure of the Pre3-1 20S proteasome core particle
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2021-02-17
Authors: Schnell, H.M., Walsh Jr, R.M., Rawson, S., Hanna, J.W.
PDB entry 7ls6: Cryo-EM structure of Pre-15S proteasome core particle assembly intermediate purified from Pre3-1 proteasome mutant (G34D)
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2021-02-17
Authors: Schnell, H.M., Walsh Jr, R.M., Rawson, S., Hanna, J.W.
PDB entry 7ls9: Cryo-EM structure of neutralizing antibody 1-57 in complex with prefusion SARS-CoV-2 spike glycoprotein
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2021-02-17
Authors: Cerutti, G., Shapiro, L.
PDB entry 7lsa: Ruminococcus bromii Amy12 with maltoheptaose
Classification: HYDROLASE
Source organism: Ruminococcus bromii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2021-02-18
Authors: Koropatkin, N.M., Cockburn, D.W., Brown, H.A., Kibler, R.D.
PDB entry 7lsb: Structure of B1, a monoclonal VEGFR2 antibody parental of KD035
Classification: ANTITUMOR PROTEIN,IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.492 Å
Deposited: 2021-02-18
Authors: Depetris, R.S.
PDB entry 7lsc: Crystal structure of near-infrared fluorescent protein miRFP670nano3
Classification: FLUORESCENT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-18
Authors: Pletnev, S.
PDB entry 7lsd: Crystal structure of near-infrared fluorescent protein miRFP718nano
Classification: FLUORESCENT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-02-18
Authors: Pletnev, S.
PDB entry 7lse: Crystal structure of the human neutralizing antibody Fab fragment T025 bound to TBEV EDIII (Far Eastern Subtype)
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Tick-borne encephalitis virus Far Eastern subtype
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-02-18
Authors: Keeffe, J.R., Bjorkman, P.J.
PDB entry 7lsf: Crystal structure of the human neutralizing antibody Fab fragment T025 bound to TBEV EDIII (Western Subtype)
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Tick-borne encephalitis virus (WESTERN SUBTYPE)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2021-02-18
Authors: Keeffe, J.R., Bjorkman, P.J.
PDB entry 7lsg: Crystal structure of the human neutralizing antibody Fab fragment T025 bound to TBEV EDIII (Siberian Subtype)
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Tick-borne encephalitis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2021-02-18
Authors: Keeffe, J.R., Bjorkman, P.J.
PDB entry 7lsi: Structure of KD035, a VEGFR2 monoclonal antibody
Classification: ANTITUMOR PROTEIN,IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-02-18
Authors: Depetris, R.S.
PDB entry 7lsj: Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H63A, crystallized in the presence of Cu(II)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2021-02-18
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lsk: Structure of HIV-1 Reverse Transcriptase in complex with DNA, L-dTTP, and CA(2+) ion
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-02-18
Authors: Hoang, A., Ruiz, F.X., Arnold, E.
PDB entry 7lsl: Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H63A, crystallized in the presence of Ni(II)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2021-02-18
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lsm: Crystal structure of E.coli DsbA in complex with bile salt taurocholate
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.786 Å
Deposited: 2021-02-18
Authors: Wang, G., Heras, B.
PDB entry 7lsn: Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H63A, crystallized in the presence of Ni(II)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2021-02-18
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lso: L-Phenylseptin
Classification: ANTIBIOTIC
Experimental method: SOLUTION NMR
Deposited: 2021-02-18
Authors: Munhoz, V.H., Verly, R.M.
PDB entry 7lsp: D-Phenylseptin - The second residue of PHE of the peptide is a D-amino acid
Classification: ANTIBIOTIC
Experimental method: SOLUTION NMR
Deposited: 2021-02-18
Authors: Munhoz, V.H.O., Verly, R.M.
PDB entry 7lsq: The Crystal Structure of Q108K:K40E:T53A:R58W:Q38F:Q4F:Y19W Mutant of HCRBPII Bound with LizFluor Chromophore Showing Excited State Intermolecular Proton Transfer
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67131 Å
Deposited: 2021-02-18
Authors: Ghanbarpour, A., Geiger, J.
PDB entry 7lsr: Ruminococcus bromii Amy12-D392A with maltoheptaose
Classification: HYDROLASE
Source organism: Ruminococcus bromii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2021-02-18
Authors: Koropatkin, N.M., Cockburn, D.W., Brown, H.A., Kibler, R.D.
PDB entry 7lss: Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-7
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2021-02-18
Authors: Rapp, M., Shapiro, L.
PDB entry 7lst: Ruminococcus bromii Amy12-D392A with 63-a-D-glucosyl-maltotriosyl-maltotriose
Classification: HYDROLASE
Source organism: Ruminococcus bromii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-02-18
Authors: Koropatkin, N.M., Cockburn, D.W., Brown, H.A., Kibler, R.D.
PDB entry 7lsu: Ruminococcus bromii Amy12-D392A with 63-a-D-glucosyl-maltotriose
Classification: HYDROLASE
Source organism: Ruminococcus bromii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-18
Authors: Koropatkin, N.M., Cockburn, D.W., Brown, H.A., Kibler, R.D.
PDB entry 7lsv: Non-kinase domain of Legionella effector protein kinase LegK2
Classification: PROTEIN BINDING
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2021-02-18
Authors: Beyrakhova, K.A., van Straaten, K., Cygler, M.
PDB entry 7lsw: Structure of Full Beta-Hairpin LIR from FNIP2 Bound to GABARAP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2021-02-18
Authors: Appleton, B.A.
PDB entry 7lsx: Cryo-EM structure of 13S proteasome core particle assembly intermediate purified from Pre3-1 proteasome mutant (G34D)
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2021-02-18
Authors: Schnell, H.M., Walsh Jr, R.M., Rawson, S., Hanna, J.W.
PDB entry 7lsy: NHEJ Short-range synaptic complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.4 Å
Deposited: 2021-02-18
Authors: He, Y., Chen, S.
PDB entry 7lsz: Hsp90a N-terminal inhibitor
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-02-18
Authors: Balch, M., Peng, S., Deng, J., Matts, R.
PDB entry 7lt0: Hsp90a N-terminal inhibitor
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.697 Å
Deposited: 2021-02-18
Authors: Balch, M., Peng, S., Deng, J., Matts, R.
PDB entry 7lt1: Structure of the cGAS-like receptor human MB21D2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-02-18
Authors: Morehouse, B.R., Slavik, K.M., Kranzusch, P.J.
PDB entry 7lt2: Structure of a dsRNA-sensing cGAS-like receptor from the beetle Tribolium castaneum
Classification: IMMUNE SYSTEM
Source organism: Tribolium castaneum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2021-02-18
Authors: Slavik, K.M., Morehouse, B.R., Kranzusch, P.J.
PDB entry 7lt3: NHEJ Long-range synaptic complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2021-02-18
Authors: He, Y., Chen, S.
PDB entry 7lt4: The aminoacrylate form of the beta-K167T mutant Tryptophan Synthase at 1.80 Angstrom resolution in complex with N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the enzyme alpha-site and cesium ion at the metal coordination site
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-18
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7lt5: CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Cofactor SAH
Classification: TRANSFERASE/DNA
Source organism: Clostridioides difficile; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2021-02-18
Authors: Horton, J.R., Cheng, X., Zhou, J.
PDB entry 7lt6: Structure of Partial Beta-Hairpin LIR from FNIP2 Bound to GABARAP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-18
Authors: Appleton, B.A.
PDB entry 7lt7: Structure of Hact-3
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2021-02-19
Authors: Schmidt, C.A., Daly, N.L.
PDB entry 7lt8: Crystal structure of Ras suppressor-1
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2021-02-19
Authors: Fukuda, K., Qin, J.
PDB entry 7lt9: Crystal structure of Ras suppressor-1 in complex with PINCH-1 LIM4-5 domains
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05011 Å
Deposited: 2021-02-19
Authors: Fukuda, K., Qin, J.