LiteFold/PDB huggingface dataset:
PDB entry 4r2d: Egr1/Zif268 zinc fingers in complex with formylated DNA
Classification: DNA Binding Protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.088 Å
Deposited: 2014-08-11
Authors: Hashimoto, H., Olanrewaju, Y.O., Zheng, Y., Wilson, G.G., Zhang, X., Cheng, X.
PDB entry 4r2e: Wilms Tumor Protein (WT1) zinc fingers in complex with methylated DNA
Classification: DNA Binding Protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2014-08-11
Authors: Hashimoto, H., Olanrewaju, Y.O., Zheng, Y., Wilson, G.G., Zhang, X., Cheng, X.
PDB entry 4r2f: Crystal structure of sugar transporter ACHL_0255 from Arthrobacter chlorophenolicus A6, target EFI-510633, with bound laminaribiose
Classification: TRANSPORT PROTEIN
Source organism: Arthrobacter chlorophenolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-08-11
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Al Obaidi, N., Chamala, S., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Lafleur, J., Siedel, R.D., Hillerich, B., Love, J., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4r2g: Crystal Structure of PGT124 Fab bound to HIV-1 JRCSF gp120 core and to CD4
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 3.283 Å
Deposited: 2014-08-11
Authors: Garces, F., Wilson, I.A.
PDB entry 4r2h: The Crystal Structure of B204, the DNA-packaging ATPase from Sulfolobus Turreted Icosahedral Virus
Classification: VIRAL PROTEIN
Source organism: Sulfolobus turreted icosahedral virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2014-08-12
Authors: Dellas, N., Nicolay, S.J., Young, M.J.
PDB entry 4r2i: The Crystal Structure of STIV B204 complexed with AMP-PNP
Classification: VIRAL PROTEIN
Source organism: Sulfolobus turreted icosahedral virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-08-12
Authors: Dellas, N., Nicolay, S.J., Young, M.J.
PDB entry 4r2j: Crystal structure of YdaA (Universal Stress Protein E) from Salmonella typhimurium
Classification: METAL BINDING PROTEIN, UNKNOWN FUNCTION
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2014-08-12
Authors: Bangera, M., Murthy, M.R.N.
PDB entry 4r2k: Crystal structure of H119A mutant of YdaA (Universal Stress Protein E) from Salmonella typhimurium
Classification: METAL BINDING PROTEIN, UNKNOWN FUNCTION
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2014-08-12
Authors: Bangera, M., Murthy, M.R.N.
PDB entry 4r2l: Crystal structure of YnaF (Universal Stress Protein F) from Salmonella typhimurium
Classification: UNKNOWN FUNCTION
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-12
Authors: Bangera, M., Murthy, M.R.N.
PDB entry 4r2m: Crystal Structure of R134D mutant of YnaF (Universal Stress Protein F) from Salmonella typhimurium
Classification: UNKNOWN FUNCTION
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-12
Authors: Bangera, M., Murthy, M.R.N.
PDB entry 4r2n: Crystal structure of Rv3772 in complex with its substrate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2014-08-12
Authors: Nasir, N., Anant, A., Vyas, R., Biswal, B.K.
PDB entry 4r2p: Wilms Tumor Protein (WT1) zinc fingers in complex with hydroxymethylated DNA
Classification: DNA Binding Protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.788 Å
Deposited: 2014-08-12
Authors: Hashimoto, H., Olanrewaju, Y.O., Zheng, Y., Wilson, G.G., Zhang, X., Cheng, X.
PDB entry 4r2q: Wilms Tumor Protein (WT1) zinc fingers in complex with formylated DNA
Classification: DNA Binding Protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2014-08-12
Authors: Hashimoto, H., Olanrewaju, Y.O., Zheng, Y., Wilson, G.G., Zhang, X., Cheng, X.
PDB entry 4r2r: Wilms Tumor Protein (WT1) zinc fingers in complex with carboxylated DNA
Classification: DNA Binding Protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.089 Å
Deposited: 2014-08-12
Authors: Hashimoto, H., Olanrewaju, Y.O., Zheng, Y., Wilson, G.G., Zhang, X., Cheng, X.
PDB entry 4r2s: Wilms Tumor Protein (WT1) Q369P zinc fingers in complex with methylated DNA
Classification: DNA Binding Protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.489 Å
Deposited: 2014-08-12
Authors: Hashimoto, H., Olanrewaju, Y.O., Zheng, Y., Wilson, G.G., Zhang, X., Cheng, X.
PDB entry 4r2u: Crystal Structure of PPARgamma in complex with SR1664
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-08-13
Authors: Marciano, D.P., Kamenecka, T., Griffin, P.R., Bruning, J.B.
PDB entry 4r2w: X-ray structure of uridine phosphorylase from Shewanella oneidensis MR-1 in complex with uridine at 1.6 A resolution
Classification: TRANSFERASE
Source organism: Shewanella oneidensis MR-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-08-13
Authors: Safonova, T.N., Mordkovich, N.N., Manuvera, V.A., Veiko, V.P., Popov, V.O., Polyakov, K.P.
PDB entry 4r2x: Unique conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis uridine phosphorylase in the free form and in complex with uridine
Classification: TRANSFERASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.93 Å
Deposited: 2014-08-13
Authors: Safonova, T.N., Mordkovich, N.N., Manuvera, V.A., Veiko, V.P., Popov, V.O., Polyakov, K.M.
PDB entry 4r2y: Crystal structure of APC11 RING domain
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.755 Å
Deposited: 2014-08-13
Authors: Brown, N.G., Watson, E.R., Weissmann, F., Jarvis, M.A., Vanderlinden, R., Grace, C.R.R., Frye, J.J., Dube, P., Qiao, R., Petzold, G., Cho, S.E., Alsharif, O., Bao, J., Zheng, J., Nourse, A., Kurinov, I., Peters, J.M., Stark, H., Schulman, B.A.
PDB entry 4r2z: Molecular Analysis of the PDZ4 Domain of Mouse PDZK1
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-08-13
Authors: Birrane, G., Kocher, O., Krieger, M.
PDB entry 4r30: Structure of human laforin dual specificity phosphatase domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-08-13
Authors: Sankhala, R.S., Koksal, A.C., Cingolani, G.
PDB entry 4r31: Crystal structure of a putative uridine phosphorylase from Actinobacillus succinogenes 130Z (Target NYSGRC-029667 )
Classification: TRANSFERASE
Source organism: Actinobacillus succinogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-08-13
Authors: Sampathkumar, P., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4r32: Crystal Structure Analysis of Pyk2 and Paxillin LD motifs
Classification: CELL ADHESION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.505 Å
Deposited: 2014-08-13
Authors: Vanarotti, M., Miller, D.J., Guibao, C.D., Nourse, A., Zheng, J.J.
PDB entry 4r33: X-ray structure of the tryptophan lyase NosL with Tryptophan and S-adenosyl-L-homocysteine bound
Classification: LYASE
Source organism: Streptomyces actuosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2014-08-14
Authors: Nicolet, Y., Zeppieri, L., Amara, P., Fontecilla-Camps, J.-C.
PDB entry 4r34: X-ray structure of the tryptophan lyase NosL with Tryptophan, 5'-deoxyadenosine and methionine bound
Classification: LYASE
Source organism: Streptomyces actuosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-14
Authors: Nicolet, Y., Zeppieri, L., Amara, P., Fontecilla-Camps, J.-C.
PDB entry 4r36: Crystal structure analysis of LpxA, a UDP-N-acetylglucosamine acyltransferase from Bacteroides fragilis 9343
Classification: TRANSFERASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-08-14
Authors: Ngo, A., Fong, K., Cox, D., Fisher, A., Chen, X.
PDB entry 4r37: Crystal structure analysis of LpxA, a UDP-N-acetylglucosamine acyltransferase from Bacteroides fragilis 9343 with UDP-GlcNAc
Classification: TRANSFERASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-08-14
Authors: Fisher, A.J., Chen, X., Ngo, A.
PDB entry 4r38: LOV domain from Erythrobacter litoralis EL346 blue-light activated histidine kinase
Classification: SIGNALING PROTEIN
Source organism: Erythrobacter litoralis HTCC2594
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-08-14
Authors: Rivera-Cancel, G., Tomchick, D.R., Gardner, K.H.
PDB entry 4r39: Histidine kinase domain from Erythrobacter litoralis EL346 blue-light activated histidine kinase
Classification: TRANSFERASE
Source organism: Erythrobacter litoralis HTCC2594
Experimental method: X-RAY DIFFRACTION
Resolution: 2.603 Å
Deposited: 2014-08-14
Authors: Tomchick, D.R., Rivera-Cancel, G., Gardner, K.H.
PDB entry 4r3a: Erythrobacter litoralis EL346 blue-light activated histidine kinase
Classification: SIGNALING PROTEIN
Source organism: Erythrobacter litoralis HTCC2594
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2014-08-14
Authors: Tomchick, D.R., Rivera-Cancel, G., Gardner, K.H.
PDB entry 4r3b: Crystal structure of SHV-1 b-lactamase in complex with 6b-(hydroxymethyl)penicillanic acid sulfone PSR-283A
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.366 Å
Deposited: 2014-08-14
Authors: Rodkey, E.A., van den Akker, F.
PDB entry 4r3c: Crystal structure of p38 alpha MAP kinase in complex with a novel isoform selective drug candidate
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2014-08-14
Authors: Grum-Tokars, V.L., Minasov, G., Roy, S.M., Anderson, W.F., Watterson, D.M.
PDB entry 4r3d: Crystal structure of MERS Coronavirus papain like protease
Classification: HYDROLASE
Source organism: Betacoronavirus England 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.818 Å
Deposited: 2014-08-15
Authors: Kong, L.Y., Wang, Q., Ming, Z.H., Shaw, N., Sun, Y.N., Yan, L.M., Lou, Z.Y., Rao, Z.H.
PDB entry 4r3e: Structure of the spliceosomal peptidyl-prolyl cis-trans isomerase Cwc27 from Homo sapiens
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-08-15
Authors: Ulrich, A., Wahl, M.C.
PDB entry 4r3f: Structure of the spliceosomal peptidyl-prolyl cis-trans isomerase Cwc27 from Chaetomium thermophilum
Classification: ISOMERASE
Source organism: Chaetomium thermophilum var. thermophilum DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2014-08-15
Authors: Ulrich, A., Wahl, M.C.
PDB entry 4r3h: The crystal structure of an apo RNA binding protein
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-08-15
Authors: Xu, C., Liu, K., Tempel, W., Li, Y., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 4r3i: The crystal structure of an RNA complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-15
Authors: Tempel, W., Xu, C., Liu, K., Li, Y., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 4r3j: Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with cefapirin
Classification: TRANSFERASE
Source organism: Atopobium parvulum DSM 20469
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2014-08-15
Authors: Filippova, E.V., Minasov, G., Kiryukhina, O., Clancy, S., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)
PDB entry 4r3k: Crystal structure of Ard1 N-terminal acetyltransferase from Sulfolobus solfataricus bound to CoA
Classification: TRANSFERASE
Source organism: Sulfolobus solfataricus P2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.133 Å
Deposited: 2014-08-16
Authors: Chang, Y.Y., Hsu, C.H.
PDB entry 4r3l: Crystal structure of Ard1 N-terminal acetyltransferase from Sulfolobus solfataricus bound to substrate peptide fragment and CoA
Classification: TRANSFERASE/TRANSFERASE SUBSTRATE
Source organism: Sulfolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.839 Å
Deposited: 2014-08-16
Authors: Chang, Y.Y., Hsu, C.H.
PDB entry 4r3m: Crystal structure of Human Hsp90 with JR9
Classification: Chaperone/Chaperone Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-16
Authors: Li, J., Yang, M., Ren, J., Xiong, B., He, J.
PDB entry 4r3n: Crystal structure of the ternary complex of sp-ASADH with NADP and 1,2,3-Benzenetricarboxylic acid
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2014-08-16
Authors: Pavlovsky, A.G., Viola, R.E.
PDB entry 4r3o: Human Constitutive 20S Proteasome
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-08-16
Authors: Sacchettini, J.C., Harshbarger, W.H.
PDB entry 4r3p: Crystal structures of EGFR in complex with Mig6
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.905 Å
Deposited: 2014-08-17
Authors: Park, E., Kim, N., Yi, Z., Cho, A., Kim, K., Ficarro, S.B., Park, A., Park, W.Y., Murray, B., Meyerson, M., Beroukim, R., Marto, J.A., Cho, J., Eck, M.J.
PDB entry 4r3q: Crystal structure of SYCE3
Classification: CELL CYCLE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2014-08-17
Authors: Lu, J., Feng, J., Zhou, W., Yang, X., Shen, Y.
PDB entry 4r3r: Crystal structures of EGFR in complex with Mig6
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2014-08-17
Authors: Park, E., Kim, N., Yi, Z., Cho, A., Kim, K., Ficarro, S.B., Park, A., Park, W.Y., Murray, B., Meyerson, M., Beroukim, R., Marto, J.A., Cho, J., Eck, M.J.
PDB entry 4r3s: Crystal Structure of anti-MSP2 Fv fragment (mAb6D8)in complex with MSP2 11-23
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-08-18
Authors: Morales, R.A.V., MacRaild, C.A., Seow, J., Bankala, K., Drinkwater, N., McGowan, S., Rouet, R., Christ, D., Anders, R.F., Norton, R.S.
PDB entry 4r3u: Crystal structure of 2-Hydroxyisobutyryl-CoA Mutase
Classification: ISOMERASE
Source organism: Aquincola tertiaricarbonis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-08-18
Authors: Zahn, M., Kurteva-Yaneva, N., Rohwerder, T., Straeter, N.
PDB entry 4r3v: Structure of karilysin propeptide and catalytic MMP domain
Classification: HYDROLASE
Source organism: Tannerella forsythia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2014-08-18
Authors: Lopez-Pelegrin, M., Ksiazek, M., Karim, A.Y., Guevara, T., Arolas, J.L., Potempa, J., Gomis-Ruth, F.X.
PDB entry 4r3w: Crystal Structure Analysis of the 1,2,3-tricarboxylate benzoic acid bound to sp-ASADH-2'5'-ADP complex
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2014-08-18
Authors: Pavlovsky, A.G., Viola, R.E.
PDB entry 4r3z: Crystal structure of human ArgRS-GlnRS-AIMP1 complex
Classification: PROTEIN BINDING/LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.033 Å
Deposited: 2014-08-18
Authors: Fu, Y., Kim, Y., Cho, Y.
PDB entry 4r40: Crystal Structure of TolB/Pal complex from Yersinia pestis.
Classification: PROTEIN TRANSPORT
Source organism: Yersinia pestis CO92
Experimental method: X-RAY DIFFRACTION
Resolution: 2.496 Å
Deposited: 2014-08-18
Authors: Maltseva, N., Kim, Y., Osipiuk, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4r41: Complex Crystal structure of 4-nitro-2-phosphono-benzoic acid with sp-Aspartate-Semialdehyde Dehydrogenase and Nicotinamide-dinucleotide
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2014-08-18
Authors: Pavlovsky, A.G., Viola, R.E.
PDB entry 4r42: Crystal structure of KatB, a manganese catalase from Anabaena PCC7120
Classification: OXIDOREDUCTASE
Source organism: Nostoc sp. PCC 7120
Experimental method: X-RAY DIFFRACTION
Resolution: 1.902 Å
Deposited: 2014-08-19
Authors: Bihani, S.C.
PDB entry 4r43: Crystal Structure Analysis of MTB PEPCK
Classification: LYASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-19
Authors: Brynda, J., Dostal, J., Pichova, I., Snasel, J., Fanfrlik, J., Machova, I.
PDB entry 4r44: Racemic crystal structure of a tetramolecular DNA G-quadruplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.695 Å
Deposited: 2014-08-19
Authors: Mandal, P.K., Collie, G.W., Kauffmann, B., Huc, I.
PDB entry 4r45: Racemic crystal structure of a bimolecular DNA G-quadruplex (P-1)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-08-19
Authors: Mandal, P.K., Collie, G.W., Kauffmann, B., Huc, I.
PDB entry 4r47: Racemic crystal structure of a bimolecular DNA G-quadruplex (P21/n)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-08-19
Authors: Mandal, P.K., Collie, G.W., Kauffmann, B., Huc, I.
PDB entry 4r48: Racemic crystal structure of a calcium-bound DNA four-way junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2014-08-19
Authors: Mandal, P.K., Collie, G.W., Kauffmann, B., Huc, I.
PDB entry 4r49: Racemic crystal structure of a calcium-bound B-DNA duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2014-08-19
Authors: Mandal, P.K., Collie, G.W., Kauffmann, B., Huc, I.
PDB entry 4r4a: Racemic crystal structure of a cobalt-bound B-DNA duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2014-08-19
Authors: Mandal, P.K., Collie, G.W., Kauffmann, B., Huc, I.
PDB entry 4r4b: Crystal structure of the anti-hiv-1 antibody 2.2c
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2014-08-19
Authors: McLellan, J.S., Acharya, P., Huang, C.-C., Robinson, J., Kwong, P.D.
PDB entry 4r4c: Structure of RPA70N in complex with 5-(4-((4-(5-carboxyfuran-2-yl)-2-chlorobenzamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2014-08-19
Authors: Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.
PDB entry 4r4d: Racemic crystal structure of a magnesium-bound B-DNA duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2014-08-19
Authors: Mandal, P.K., Collie, G.W., Kauffmann, B., Huc, I.
PDB entry 4r4e: Structure of GlnR-DNA complex
Classification: Transcription regulator/DNA
Source organism: Bacillus subtilis subsp. subtilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2014-08-19
Authors: Schumacher, M.A.
PDB entry 4r4f: Crystal structure of non-neutralizing, A32-like antibody 2.2c in complex with HIV-1 YU2 gp120
Classification: VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR
Source organism: Homo sapiens; Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.514 Å
Deposited: 2014-08-19
Authors: Acharya, P., Kwong, P.D.
PDB entry 4r4g: Crystal structure of a putative lipoprotein (ycdA) from Bacillus subtilis subsp. subtilis str. 168 at 2.62 A resolution
Classification: STRUCTURAL GENOMICS,  UNKNOWN FUNCTION
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2014-08-19
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4r4h: Crystal structure of non-neutralizing, A32-like antibody 2.2c in complex with HIV-1 Env gp120
Classification: VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 4.28 Å
Deposited: 2014-08-19
Authors: Mclellan, J., Acharya, P., Huang, C.-C., Kwong, P.D.
PDB entry 4r4i: Structure of RPA70N in complex with 5-(4-((6-(5-carboxyfuran-2-yl)-1-thioxo-3,4-dihydroisoquinolin-2(1H)-yl)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2014-08-19
Authors: Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.
PDB entry 4r4j: Crystal structure of complex sp_ASADH with 3-carboxypropyl-phthalic acid and Nicotinamide Adenine dinucleotide phosphate
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2014-08-19
Authors: Pavlovsky, A.G., Thangavelu, B., Bhansali, P., Viola, R.E.
PDB entry 4r4k: Crystal structure of a cystatin-like protein (BACCAC_01506) from Bacteroides caccae ATCC 43185 at 1.69 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacteroides caccae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2014-08-19
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4r4l: Crystal structure of wt cGMP dependent protein kinase I alpha (PKGI alpha) leucine zipper
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.245 Å
Deposited: 2014-08-19
Authors: Reger, A.S., Guo, E., Yang, M.P., Qin, L., Kim, C.
PDB entry 4r4m: Crystal structure of C42L cGMP dependent protein kinase I alpha (PKGI alpha) leucine zipper
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.922 Å
Deposited: 2014-08-19
Authors: Reger, A.S., Guo, E., Yang, M.P., Qin, L., Kim, C.
PDB entry 4r4n: Crystal structure of the anti-hiv-1 antibody 2.2c in complex with hiv-1 93ug037 gp120
Classification: VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR
Source organism: Homo sapiens; Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.56 Å
Deposited: 2014-08-19
Authors: Acharya, P., Louder, R., Kwong, P.D.
PDB entry 4r4o: Crystal structure of RPA70N in complex with 5-(4-((4-(5-carboxyfuran-2-yl)benzyl)carbamothioyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2014-08-19
Authors: Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.
PDB entry 4r4p: Crystal Structure of the VS ribozyme-A756G mutant
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2014-08-19
Authors: Piccirilli, J.A., Suslov, N.B., Dasgupta, S., Huang, H., Lilley, D.M.J., Rice, P.A.
PDB entry 4r4q: Crystal structure of RPA70N in complex with 5-(3-((N-(4-(5-carboxyfuran-2-yl)benzyl)acetamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2014-08-19
Authors: Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.
PDB entry 4r4r: Crystal structure of chimeric beta-lactamase cTEM-19m at 1.2 angstrom resolution
Classification: HYDROLASE
Source organism: Escherichia coli; Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2014-08-19
Authors: Park, J., Gobeil, S., Pelletier, J.N., Berghuis, A.M.
PDB entry 4r4s: Crystal structure of chimeric beta-lactamase cTEM-19m at 1.1 angstrom resolution
Classification: HYDROLASE
Source organism: Escherichia coli; Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2014-08-19
Authors: Park, J., Gobeil, S., Pelletier, J.N., Berghuis, A.M.
PDB entry 4r4t: Crystal Structure of RPA70N in complex with 5-(4-((4-(5-carboxyfuran-2-yl)phenylthioamido)methyl)phenyl)-1-(3,4-dichlorophenyl)-1H-pyrazole-3-carboxylic acid
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2014-08-19
Authors: Feldkamp, M.D., Waterson, A.G., Kennedy, J.P., Patrone, J.D., Pelz, N.F., Frank, A.O., Vangamudi, B., Sousa-Fagundes, E.M., Rossanese, O.W., Fesik, S.W., Chazin, W.J.
PDB entry 4r4u: Crystal structure of acyl-CoA thioesterase tesB from Yersinia pestis in complex with coenzyme A
Classification: HYDROLASE
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-19
Authors: Swarbrick, C.M.D., Forwood, J.K.
PDB entry 4r4v: Crystal structure of the VS ribozyme - G638A mutant
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2014-08-19
Authors: Piccirilli, J.A., Suslov, N.B., Dasgupta, S., Huang, H., Lilley, D.M.J., Rice, P.A.
PDB entry 4r4x: Structure of PNGF-II in C2 space group
Classification: HYDROLASE
Source organism: Elizabethkingia meningoseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-08-20
Authors: Sun, G., Yu, X., Celimuge, Wang, L., Li, M., Gan, J., Qu, D., Ma, J., Chen, L.
PDB entry 4r4y: Structural basis of a point mutation that causes the genetic disease Aspartylglucosaminuria
Classification: HYDROLASE
Source organism: Elizabethkingia miricola
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-08-20
Authors: Sui, L., Damodharan, L., Pande, S., Guo, H.C.
PDB entry 4r4z: Structure of PNGF-II in P21 space group
Classification: HYDROLASE
Source organism: Elizabethkingia meningoseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2014-08-20
Authors: Sun, G., Yu, X., Celimuge, Wang, L., Li, M., Gan, J., Qu, D., Ma, J., Chen, L.
PDB entry 4r50: Crystal Structure of CNG mimicking NaK-ETPP mutant cocrystallized with Li+
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2014-08-20
Authors: De March, M., Napolitano, L.M.R., Onesti, S.
PDB entry 4r51: Crystal complex structure of sp-Aspartate-Semialdehyde-Dehydrogenase with Nicotinamide Adenine dinucleotide phosphate and phthalic acid
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2014-08-20
Authors: Pavlovsky, A.G., Viola, R.E.
PDB entry 4r52: 1.5 angstrom crystal structure of 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
Classification: OXIDOREDUCTASE
Source organism: Cupriavidus metallidurans CH34
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2014-08-20
Authors: Geng, J., Gumpper, R.H., Huo, L., Liu, A.
PDB entry 4r53: dihydrodipicolinate synthase from C. jejuni with vacant active site and vacant allosteric site
Classification: LYASE
Source organism: Campylobacter jejuni subsp. jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-08-20
Authors: Conly, C.J.T.
PDB entry 4r54: Complex crystal structure of sp-Aspartate-Semialdehyde-Dehydrogenase with 3-carboxy-ethyl-phthalic acid
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2014-08-20
Authors: Pavlovsky, A.G., Viola, R.E.
PDB entry 4r55: The crystal structure of a Cren7 mutant protein GR and dsDNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Sulfolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-20
Authors: Zhang, Z.F., Gong, Y., Chen, Y.Y., Li, H.B., Huang, L.
PDB entry 4r56: Crystal structure of Sulfolobus Cren7-dsDNA(GTGATCAC) complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Sulfolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-08-20
Authors: Zhang, Z.F., Gong, Y., Chen, Y.Y., Li, H.B., Huang, L.
PDB entry 4r57: Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with acetyl-CoA
Classification: TRANSFERASE
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.079 Å
Deposited: 2014-08-20
Authors: Filippova, E.V., Minasov, G., Kiryukhina, O., Shuvalova, L., Kuhn, M.L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4r58: Crystal structure of computational designed leucine rich repeats DLRR_A in space group P21
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-08-20
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 4r59: A Carbonic Anhydrase IX Mimic in Complex with a Carbohydrate-Based Sulfamate
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2014-08-20
Authors: Mahon, B.P., McKenna, R.
PDB entry 4r5a: A Carbonic Anhydrase IX Mimic in Complex with a Carbohydrate-Based Sulfamate
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2014-08-20
Authors: Mahon, B.P., McKenna, R.
PDB entry 4r5b: Human Carbonic Anhydrase II in Complex with a Carbohydrate-Based Sulfamate
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-08-20
Authors: Mahon, B.P., McKenna, R.
PDB entry 4r5c: Crystal structure of computational designed leucine rich repeats DLRR_E in space group of P212121
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2014-08-21
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 4r5d: Crystal structure of computational designed leucine rich repeats DLRR_G3 in space group F222
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2014-08-21
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 4r5e: Crystal Structure of Family GH18 Chitinase from Cycas revoluta a Complex with Allosamidin
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Cycas revoluta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-08-21
Authors: Umemoto, N., Numata, T., Ohnuma, T., Fukamizo, T.
PDB entry 4r5f: X-ray structure of the D199K mutant of the cysteine desulfurase IscS from A. fulgidus
Classification: METAL BINDING PROTEIN
Source organism: Archaeoglobus fulgidus DSM 4304
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-08-21
Authors: Pagnier, A., Nicolet, Y., Fontecilla-Camps, J.C.
PDB entry 4r5g: Crystal structure of the DnaK C-terminus with the inhibitor PET-16
Classification: Chaperone/Chaperone inhibitor
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4501 Å
Deposited: 2014-08-21
Authors: Leu, J.I., Zhang, P., Murphy, M.E., Marmorstein, R., George, D.L.
PDB entry 4r5h: Crystal structure of sp-Aspartate-Semialdehyde-Dehydrogenase with Nicotinamide-Adenine-Dinucleotide-Phosphate and 3-carboxy-propenyl-phthalic acid
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-21
Authors: Pavlovsky, A.G., Thangavelu, B., Bhansali, P., Viola, R.E.
PDB entry 4r5i: Crystal structure of the DnaK C-terminus with the substrate peptide NRLLLTG
Classification: CHAPERONE
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9702 Å
Deposited: 2014-08-21
Authors: Leu, J.I., Zhang, P., Murphy, M.E., Marmorstein, R., George, D.L.
PDB entry 4r5j: Crystal structure of the DnaK C-terminus (Dnak-SBD-A)
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.361 Å
Deposited: 2014-08-21
Authors: Leu, J.I., Zhang, P., Murphy, M.E., Marmorstein, R., George, D.L.
PDB entry 4r5k: Crystal structure of the DnaK C-terminus (Dnak-SBD-B)
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7469 Å
Deposited: 2014-08-21
Authors: Leu, J.I., Zhang, P., Murphy, M.E., Marmorstein, R., George, D.L.
PDB entry 4r5l: Crystal structure of the DnaK C-terminus (Dnak-SBD-C)
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9701 Å
Deposited: 2014-08-21
Authors: Leu, J.I., Zhang, P., Murphy, M.E., Marmorstein, R., George, D.L.
PDB entry 4r5m: Crystal structure of Vc-Aspartate beta-semialdehyde-dehydrogenase with NADP and 4-Nitro-2-Phosphono-Benzoic acid
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae O1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2014-08-21
Authors: Pavlovsky, A.G., Thangavelu, B., Bhansali, P., Viola, R.E.
PDB entry 4r5n: 8-Tetrahydropyran-2-yl chromans: highly selective beta-site amyloid precursor protein cleaving enzyme 1 (BACE1) inhibitors
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-21
Authors: Vigers, G.P.A., Smith, D.
PDB entry 4r5o: Crystal structure of a Quinonprotein alcohol dehydrogenase-like protein (BT1487) from Bacteroides thetaiotaomicron VPI-5482 at 2.64 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2014-08-21
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4r5p: Crystal structure of HIV-1 reverse transcriptase (RT) with DNA and a nucleoside triphosphate mimic alpha-carboxy nucleoside phosphonate inhibitor
Classification: TRANSFERASE, HYDROLASE/DNA/INHIBITOR
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.894 Å
Deposited: 2014-08-21
Authors: Das, K., Martinez, S.E., Arnold, E.
PDB entry 4r5q: Crystal structure and nuclease activity of the CRISPR-associated Cas4 protein Pcal_0546 from Pyrobaculum calidifontis containing a [2Fe-2S] cluster
Classification: HYDROLASE
Source organism: Pyrobaculum calidifontis JCM 11548
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2014-08-21
Authors: Nocek, B., Skarina, T., Lemak, S., Brown, G., Savchenko, A., Joachimiak, A., Yakunin, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4r5r: Crystal structure of Rhodostomin KKKRT mutant
Classification: TOXIN
Source organism: Calloselasma rhodostoma
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2014-08-21
Authors: Huang, C.H., Shiu, J.H., Chang, Y.T., Jeng, W.Y., Chuang, W.J.
PDB entry 4r5s: Crystal structure of EGFR 696-1022 L858R in complex with FIIN-3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.001 Å
Deposited: 2014-08-22
Authors: Zhu, S.J., Yun, C.H.
PDB entry 4r5t: Structure of the m1 alanylaminopeptidase from malaria complexed with a hydroxamic acid-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Plasmodium falciparum FcB1/Columbia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2014-08-22
Authors: Drinkwater, N., Mcgowan, S.
PDB entry 4r5u: Crystal structure of Rhodostomin R46E mutant
Classification: TOXIN
Source organism: Calloselasma rhodostoma
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2014-08-22
Authors: Huang, C.H., Shiu, J.H., Chang, Y.T., Jeng, W.Y., Chuang, W.J.
PDB entry 4r5v: Structure of the m1 alanylaminopeptidase from malaria complexed with a hydroxamic acid-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Plasmodium falciparum FcB1/Columbia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-08-22
Authors: Drinkwater, N., Mcgowan, S.
PDB entry 4r5w: Human artd1 (parp1) - catalytic domain in complex with inhibitor xav939
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2014-08-22
Authors: Karlberg, T., Thorsell, A.G., Schuler, H.
PDB entry 4r5x: Structure of the m1 alanylaminopeptidase from malaria complexed with a hydroxamic acid-based inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Plasmodium falciparum FcB1/Columbia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-08-22
Authors: Drinkwater, N., Mcgowan, S.
PDB entry 4r5y: The complex structure of Braf V600E kinase domain with a novel Braf inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2014-08-22
Authors: Feng, Y., Peng, H., Zhang, Y., Liu, Y., Wei, M.
PDB entry 4r5z: Crystal structure of Rv3772 encoded aminotransferase
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-08-22
Authors: Nasir, N., Anant, A., Vyas, R., Biswal, B.K.
PDB entry 4r60: Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris
Classification: HYDROLASE
Source organism: Xanthomonas campestris pv. campestris str. ATCC 33913
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2014-08-22
Authors: Kumar, A., Ghosh, B., Are, V.N., Jamdar, S.N., Makde, R.D., Sharma, S.M.
PDB entry 4r61: Crystal structure of a rationally designed single-chain protein mimicking a trimeric gp41 N-terminal heptad-repeat region
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2014-08-22
Authors: Camara-Artigas, A., Conejero-Lara, F., Crespillo, S., Casares, S.
PDB entry 4r62: Structure of Rad6~Ub
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2014-08-22
Authors: Kumar, P., Wolberger, C.
PDB entry 4r63: Binary complex crystal structure of R258A mutant of DNA polymerase Beta
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-08-22
Authors: Batra, V.K., Beard, W.A., Wilson, S.H.
PDB entry 4r64: Binary complex crystal structure of E295K mutant of DNA polymerase Beta
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-22
Authors: Batra, V.K., Beard, W.A., Wilson, S.H.
PDB entry 4r65: Ternary complex crystal structure of R258A mutant of DNA polymerase Beta
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-08-22
Authors: Batra, V.K., Beard, W.A., Wilson, S.H.
PDB entry 4r66: Ternary complex crystal structure of E295K mutant of DNA polymerase Beta
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2014-08-22
Authors: Batra, V.K., Beard, W.A., Wilson, S.H.
PDB entry 4r67: Human constitutive 20S proteasome in complex with carfilzomib
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2014-08-22
Authors: Sacchettini, J.C., Harshbarger, W.H.
PDB entry 4r68: Lactate Dehydrogenase in complex with inhibitor compound 31
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.112 Å
Deposited: 2014-08-22
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 4r69: Lactate Dehydrogenase in complex with inhibitor compound 13
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2014-08-22
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 4r6a: Crystal structure of human TLR8 in complex with Hybrid-2
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-08-22
Authors: Tanji, H., Ohto, U., Shimizu, T.
PDB entry 4r6b: Rational Design of Enhanced Photoresistance in a Photoswitchable Fluorescent Protein
Classification: FLUORESCENT PROTEIN
Source organism: Lobophyllia hemprichii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-08-23
Authors: Duan, C., Adam, V., Byrdin, M., Bourgeois, D.
PDB entry 4r6c: X-ray diffraction in temporally and spatially resolved biomolecular science: the X-ray crystal structure of hen egg white lysozyme cocrystallized with Ta6Br12 and then a crystal soaked in K2PtBr6
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-08-24
Authors: Helliwell, J.R.
PDB entry 4r6d: Modified mTFP* for enhanced metal binding: co-crystallization with CuCl2
Classification: FLUORESCENT PROTEIN
Source organism: Clavularia sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2014-08-25
Authors: Fischer, J., Quitterer, F., Groll, M., Eppinger, J.
PDB entry 4r6e: Human artd1 (parp1) - catalytic domain in complex with inhibitor niraparib
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-25
Authors: Karlberg, T., Thorsell, A.G., Brock, J., Schuler, H.
PDB entry 4r6f: Crystal structure of computational designed protein DLRR_I
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2014-08-25
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 4r6g: Crystal structure of computational designed leucine rich repeats DLRR_K in space group P22121
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-08-25
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 4r6h: Crystal structure of putative binding protein msme from bacillus subtilis subsp. subtilis str. 168, target efi-510764, an open conformation
Classification: TRANSPORT PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-08-25
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Al obaidi, N., Chamala, S., Attonito, J.D., Scott glenn, A., Chowdhury, S., Lafleur, J., Siedel, R.D., Hillerich, B., Love, J., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4r6i: AtxA protein, a virulence regulator from Bacillus anthracis.
Classification: TRANSCRIPTION
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2014-08-25
Authors: Osipiuk, J., Horton, L.B., Koehler, T.M., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4r6j: Crystal structure of computaional designed Lucine rich repeats DLRR_H in space group P212121
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2014-08-25
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 4r6k: Crystal structure of ABC transporter substrate-binding protein YesO from Bacillus subtilis, TARGET EFI-510761, an open conformation
Classification: TRANSPORT PROTEIN
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2014-08-25
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Al Obaidi, N., Chamala, S., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Lafleur, J., Siedel, R.D., Hillerich, B., Love, J., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4r6l: Crystal structure of bacteriophytochrome RpBphP2 from photosynthetic bacterium R. palustris
Classification: SIGNALING PROTEIN
Source organism: Rhodopseudomonas palustris CGA009
Experimental method: X-RAY DIFFRACTION
Resolution: 3.395 Å
Deposited: 2014-08-25
Authors: Yang, X., Stojkovic, E., Ozarowski, W., Kuk, J., Davydova, E., Moffat, K.
PDB entry 4r6m: Crystal Structure of DNA Duplex Containing Two Consecutive Mercury-mediated Base Pairs
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.357 Å
Deposited: 2014-08-26
Authors: Xu, C.Y., Yu, F., Wang, L.H., Zhao, Y., Lin, T., Fan, C.H., He, J.H.
PDB entry 4r6n: Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity
Classification: SUGAR BINDING PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2014-08-26
Authors: Abhinav, K.V., Sharma, K., Swaminathan, C.P., Surolia, A., Vijayan, M.
PDB entry 4r6o: Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity.
Classification: SUGAR BINDING PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-08-26
Authors: Abhinav, K.V., Sharma, K., Swaminathan, C.P., Surolia, A., Vijayan, M.
PDB entry 4r6p: Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity.
Classification: SUGAR BINDING PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-08-26
Authors: Abhinav, K.V., Sharma, K., Swaminathan, C.P., Surolia, A., Vijayan, M.
PDB entry 4r6q: Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity.
Classification: SUGAR BINDING PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-08-26
Authors: Abhinav, K.V., Sharma, K., Swaminathan, C.P., Surolia, A., Vijayan, M.
PDB entry 4r6r: Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity.
Classification: SUGAR BINDING PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2014-08-26
Authors: Abhinav, K.V., Sharma, K., Swaminathan, C.P., Surolia, A., Vijayan, M.