LiteFold/PDB huggingface dataset:
PDB entry 9n22: Y20S (Sec18-Sec17-Sec9-Sso1-Snc1) EDTA - Class 2
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.91 Å
Deposited: 2025-01-27
Authors: Khan, Y.A., Brunger, A.T.
PDB entry 9n23: Crystal structure of cIAP1-BIR3 with XB2 series SMAC mimetic ligand
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-01-27
Authors: Nguyen, S., Lucet, I., Roy, M.J.
PDB entry 9n24: Crystal structure of Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with Bisphenol B
Classification: NUCLEAR PROTEIN
Source organism: Melanotaenia fluviatilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-01-27
Authors: Pederick, J.L., Bruning, J.B.
PDB entry 9n25: Crystal structure of Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with Bisphenol Z
Classification: NUCLEAR PROTEIN
Source organism: Melanotaenia fluviatilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-01-27
Authors: Pederick, J.L., Bruning, J.B.
PDB entry 9n26: DNA gyrase complexed with uncleaved DNA and Compound 148 to 1.96 A resolution
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.963 Å
Deposited: 2025-01-27
Authors: Bell, C.E., McElroy, C.A., Ratigan, S.C.
PDB entry 9n27: Crystal structure of Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with Bisphenol TMC
Classification: NUCLEAR PROTEIN
Source organism: Melanotaenia fluviatilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-01-27
Authors: Pederick, J.L., Bruning, J.B.
PDB entry 9n28: Crystal structure of Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with estradiol and D22 13mer
Classification: NUCLEAR PROTEIN
Source organism: Melanotaenia fluviatilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-01-27
Authors: Pederick, J.L., Bruning, J.B.
PDB entry 9n2a: Crystal structure of N-oxygenase HrmI with the diferrous cofactor and substrate bound
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2025-01-28
Authors: Skirboll, S.S., Phan, H.N., Swartz, P.D., Makris, T.M.
PDB entry 9n2b: Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-01-28
Authors: Welfer, G.A., Brady, R.A., Natchiar, S.K., Watson, Z.L., Rundlet, E.J., Alejo, J.L., Singh, A.P., Mishra, N.K., Altman, R.B., Blanchard, S.C.
PDB entry 9n2c: Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2025-01-28
Authors: Welfer, G.A., Brady, R.A., Natchiar, S.K., Watson, Z.L., Rundlet, E.J., Alejo, J.L., Singh, A.P., Mishra, N.K., Altman, R.B., Blanchard, S.C.
PDB entry 9n2d: Cryo-EM structure of an extended F. johnsoniae BAM complex, composite map
Classification: MEMBRANE PROTEIN
Source organism: Flavobacterium johnsoniae UW101
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-01-28
Authors: Deme, J.C., Lea, S.M.
PDB entry 9n2e: Cryo-EM structure of F. johnsoniae BamAP
Classification: MEMBRANE PROTEIN
Source organism: Flavobacterium johnsoniae UW101
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-01-28
Authors: Deme, J.C., Lea, S.M.
PDB entry 9n2f: Cryo-EM structure of F. johnsoniae BamAD
Classification: MEMBRANE PROTEIN
Source organism: Flavobacterium johnsoniae UW101
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-01-28
Authors: Deme, J.C., Lea, S.M.
PDB entry 9n2g: Structure of apo Mtb NapA(16-90)
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2025-01-28
Authors: Schumacher, M.A.
PDB entry 9n2i: cryo-EM structure of GCGR-Gs complex with SRB103Q
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-28
Authors: Zhang, X., Mohebali, N., Belousoff, M.J., Wootten, D., Sexton, P.M.
PDB entry 9n2j: Crystal structure of Melanotaenia fluviatilis estrogen receptor alpha ligand binding domain complexed with estradiol
Classification: NUCLEAR PROTEIN
Source organism: Melanotaenia fluviatilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2025-01-29
Authors: Pederick, J.L., Bruning, J.B.
PDB entry 9n2k: N-terminal domain of Bacillus subtilis MutL bound to ADP
Classification: DNA BINDING PROTEIN
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2025-01-29
Authors: Rodriguez Gonzalez, J., Guarne, A.
PDB entry 9n2l: Cryo-EM structure of locally refined up conformation of SARS-CoV-2 spike protein Receptor Binding Domain
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2025-01-29
Authors: Singh, S., Hasan, S.S.
PDB entry 9n2m: Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound MW01-30-047SRM
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2025-01-29
Authors: Brunzelle, J.S., Shuvalova, L., Roy, S.M., Watterson, D.M.
PDB entry 9n2n: Structure of M tuberculosis NapA bound to 20mer AT rich DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.87 Å
Deposited: 2025-01-29
Authors: Schumacher, M.A.
PDB entry 9n2o: Crystal Structure of Human DAPK1 Catalytic Subunit Complexed with Compound MW01-27-040SRM
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2025-01-29
Authors: Brunzelle, J.S., Shuvalova, L., Roy, S.M., Watterson, D.M.
PDB entry 9n2q: Structure of GDP-bound GM4951
Classification: LIPID BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2025-01-29
Authors: Raj, R., Beutler, B.
PDB entry 9n2r: Structure of GTP-bound GM4951
Classification: LIPID BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2025-01-29
Authors: Raj, R., Beutler, B.
PDB entry 9n2s: Structure of GDP-bound GM4951_N86K mutant
Classification: LIPID BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2025-01-29
Authors: Raj, R., Beutler, B.
PDB entry 9n2t: Structure of GDP-bound GM4951_D125G mutant
Classification: LIPID BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-01-29
Authors: Raj, R., Beutler, B.
PDB entry 9n2u: Glutarate L-2-hydroxylase N187C mutant-5'-Mal-C6-GC DNA conjugate
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2025-01-29
Authors: Han, Z., Mirkin, C.A.
PDB entry 9n2v: Designed anti-OSM Fab
Classification: IMMUNE SYSTEM
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2025-01-29
Authors: Kiefer, J.R., Alberstein, R.G., Watkins, A.M., Seeger, F., Frey, N.C., Bonneau, R., Regev, A., Hofmann, J.L., Gligorijevic, V.
PDB entry 9n2w: Dienelactone hydrolase family protein SaDLH from Solimonas aquatica
Classification: HYDROLASE
Source organism: Solimonas aquatica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-01-29
Authors: Schnettler Fernandez, J.D.F., Campbell, E.C., Hollfelder, F.
PDB entry 9n31: Racemic mixture of peptide QVGGVV forms rippled sheets
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.102 Å
Deposited: 2025-01-29
Authors: Sawaya, M.R., Raskatov, J.A., Hazari, A.
PDB entry 9n32: PilU from Pseudomonas aeruginosa: C3ocococ conformation
Classification: MOTOR PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 4.54 Å
Deposited: 2025-01-29
Authors: McCallum, M., Howell, P.L., Burrows, L.
PDB entry 9n33: Glutarate L-2-hydroxylase N187C mutant-5'-Mal-C6-AGCT DNA conjugate
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2025-01-29
Authors: Han, Z., Mirkin, C.A.
PDB entry 9n34: Glutarate L-2-hydroxylase N187C mutant-5'-Mal-C6-TTTT DNA conjugate
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2025-01-29
Authors: Han, Z., Mirkin, C.A.
PDB entry 9n35: Mixture of L-peptide FVGGVV and D-peptide mvggvv forms rippled sheets
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2025-01-29
Authors: Sawaya, M.R., Raskatov, J.A., Hazari, A.
PDB entry 9n36: CryoEM structure Of Respiratory Syncytial Virus Polymerase with novel non-nucleoside inhibitor compound 22
Classification: TRANSFERASE/INHIBITOR
Source organism: human respiratory syncytial virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2025-01-30
Authors: Yin, Y., Yu, X., Kalin, J.H., Tran, M.T., Sharma, S.
PDB entry 9n37: Cryo-EM structure of Rubisco from Arabidopsis thaliana with the 1A small subunit isoform
Classification: PHOTOSYNTHESIS
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-01-30
Authors: Stavros, A., Askey, B., Ceminsky, M., Gunn, L.H.
PDB entry 9n38: Cryo EM structure of LukAB (LukGH) toxin from Staphylococcus aureus in complex with neutralizing Fab STAU-15
Classification: IMMUNE SYSTEM/Toxin
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2025-01-30
Authors: Binshtein, E., Crowe, J.E.
PDB entry 9n39: DNA gyrase complexed with uncleaved DNA and Compound 185 to 2.25 A resolution
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.255 Å
Deposited: 2025-01-30
Authors: Bell, C.E., McElroy, C.A., Ratigan, S.C.
PDB entry 9n3d: Crystal structure of Arabidopsis metacaspase 9 C147G at pH 4.2
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-01-30
Authors: Liu, H., Liu, Q.
PDB entry 9n3e: Crystal structure of Arabidopsis metacaspase 9 C147G at pH 5.5
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2025-01-30
Authors: Liu, H., Liu, Q.
PDB entry 9n3f: Crystal structure of Arabidopsis Metacaspase 9 C147G at pH 7.5
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2025-01-30
Authors: Liu, H., Liu, Q.
PDB entry 9n3h: Crystal structure of HBV capsid with compound 18
Classification: VIRAL PROTEIN
Source organism: Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.543 Å
Deposited: 2025-01-31
Authors: White, A., Lakshminarasimhan, D., Cakici, O., Suto, R.
PDB entry 9n3l: Co-crystal structure of PCNA bound to HSP90alpha inhibitor, SNX2112
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-01-31
Authors: Jossart, J.J., Perry, J.J.
PDB entry 9n3m: SARS-CoV-2 Mpro L50F/E166A/L167F triple mutant bound to inhibitor
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-01-31
Authors: Lu, J., Chen, P., Demmon, S., Fischer, C., Vederas, J.C., Lemieux, M.J.
PDB entry 9n3n: Crystal structure of PRMT5:MEP50 in complex with MTA and oxamide compound 3
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2025-01-31
Authors: Whittington, D.A.
PDB entry 9n3o: Crystal structure of PRMT5:MEP50 in complex with MTA and oxamide compound 14
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2025-01-31
Authors: Whittington, D.A.
PDB entry 9n3p: Crystal structure of PRMT5:MEP50 in complex with MTA and oxamide compound 30
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2025-01-31
Authors: Whittington, D.A.
PDB entry 9n3q: Crystal structure of PRMT5:MEP50 in complex with MTA and oxamide compound 51
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2025-01-31
Authors: Whittington, D.A.
PDB entry 9n3r: Crystal structure of PRMT5:MEP50 in complex with MTA and TNG462
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2025-01-31
Authors: Whittington, D.A.
PDB entry 9n3s: Crystal structure of the fungal mannosyltransferase Och1 reveals active site primed for N-glycan binding
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2025-01-31
Authors: Kelly, E.T.R., Rodionov, D., Berghuis, A.M.
PDB entry 9n3u: Structure of glyoxal oxidase from Fusarium graminearum at 1.28 Angstroms resolution
Classification: OXIDOREDUCTASE
Source organism: Fusarium graminearum PH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2025-01-31
Authors: Fong, J.K., Cordeiro, R.L., Van Petegem, F., Brumer, H.
PDB entry 9n3v: Cryo-EM structure of the magnesium transporter MgtA in E1-like and E2-P conformations at 2.59 angstroms
Classification: TRANSPORT PROTEIN
Source organism: Lactococcus lactis subsp. lactis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2025-01-31
Authors: Khan, M.B., Primeau, J.O., Basu, P.C., Morth, J.P., Lemieux, M.J., Young, H.S.
PDB entry 9n3x: Crystal Structure of anti-CRISPR AcrIE7 Determined by Experimental MAD Phasing with Hg
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2025-01-31
Authors: Redman, O., Jackson, R.N.
PDB entry 9n40: MS2-pMS2 Icosahedral Reconstruction
Classification: VIRUS LIKE PARTICLE
Source organism: Escherichia phage MS2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2025-02-01
Authors: Subramanian, S., Makasarashvili, N., Garmann, R.F., Parent, K.N.
PDB entry 9n41: MS2-pcoat Icosahedral Reconstruction
Classification: VIRUS LIKE PARTICLE
Source organism: Escherichia phage MS2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2025-02-01
Authors: Subramanian, S., Makasarashvili, N., Garmann, R.F., Parent, K.N.
PDB entry 9n42: Crystal structure of an anti-CRISPR Protein AcrIE7
Classification: UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-02-01
Authors: Redman, O., Jackson, R.N.
PDB entry 9n43: Crystal structure of none-heme iron enzyme (TqaM) from Trichoderma atroviride bound with iron
Classification: METAL BINDING PROTEIN
Source organism: Trichoderma atroviride
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-02-01
Authors: Liu, S., Zheng, Y.-C., Chang, W.-C.
PDB entry 9n44: Crystal structure of human KRAS-G12C covalent bound to Olomorasib
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2025-02-01
Authors: Wang, J., Hendle, J., Saflor, M.D., Lagutan, M.D., Gheyi, T., Sarkar, A., Kearins, M., Tung, F., Ho, J., Rodgers, L., Benach, J., Frommelt, A.J.
PDB entry 9n45: Crystal structure of none-heme iron enzyme (TqaM) from Trichoderma atroviride bound with iron and 2-aminoisobutyric acid
Classification: METAL BINDING PROTEIN
Source organism: Trichoderma atroviride
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-02-01
Authors: Liu, S., Zheng, Y.-C., Chang, W.-C.
PDB entry 9n47: Cryo-EM structure of Candida albicans pH regulated antigen 1 (Pra1) protein in the absence of Zn2+
Classification: METAL BINDING PROTEIN
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-02-02
Authors: Syrjanen, J.L., Perera, R.L.
PDB entry 9n48: Crystal structure of PAK1 bound to compound C1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2025-02-02
Authors: Wang, W., Oh, A., Kiefer, J.R., Hsu, P.L.
PDB entry 9n49: C-ring - single subunit of the 34-mer CCW flagellar switch complex - FliF, FliG, FliM, and FliN from Salmonella
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-02-02
Authors: Singh, P.K., Iverson, T.M.
PDB entry 9n4a: Wild-type RhoA GTPase bound to GppNHp
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.947 Å
Deposited: 2025-02-02
Authors: Marcus, K., Mattos, C.
PDB entry 9n4b: RhoA GTPase R70A bound to GTPgammaS
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-02-02
Authors: Marcus, K., Mattos, C.
PDB entry 9n4c: RhoA GTPase E102A bound to GTPgammaS
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-02-02
Authors: Marcus, K., Mattos, C.
PDB entry 9n4d: Cryo-EM structure of Candida albicans pH regulated antigen 1 (Pra1) protein in complex with Zn2+
Classification: METAL BINDING PROTEIN
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-02-02
Authors: Syrjanen, J.L., Perera, R.L.
PDB entry 9n4e: Structure of AG2-G02 Fab in complex with influenza H3N8 A/Mallard/Alberta/362/2017 Hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-02-02
Authors: Gopal, A.B., Wu, N.C., Lv, H., Pholcharee, T.
PDB entry 9n4f: Structure of 240-14-IgA_2F02 Fab in complex with influenza H3N8 A/Mallard/Alberta/362/2017 Hemagglutinin
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2025-02-02
Authors: Gopal, A.B., Wu, N.C., Lv, H., Pholcharee, T.
PDB entry 9n4g: YehD Receptor Binding Domain
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-02-02
Authors: Klein, R.D., Tamadonfar, K.O., Pinkner, J.S., Hultgren, S.J.
PDB entry 9n4h: YehD receptor binding domain S49A
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-02-02
Authors: Tamadonfar, K.O., Klein, R.D., Hultgren, S.J.
PDB entry 9n4i: YehD receptor binding domain Y150A
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2025-02-02
Authors: Tamadonfar, K.O., Klein, R.D., Hultgren, S.J.
PDB entry 9n4j: Cryo-EM structure of rabbit TRPM3 in complex with CIM0216 at 18 degrees Celsius
Classification: MEMBRANE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2025-02-03
Authors: Kumar, S., Lu, W., Du, J.
PDB entry 9n4k: CryoEM structure of ALK2-ActRIIB bound to BMP6
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-02-03
Authors: Goebel, E.J., Saotome, K., Franklin, M.C.
PDB entry 9n4l: Composite map for GluK2 in the apo state with asymmetric ligand binding domain
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.24 Å
Deposited: 2025-02-03
Authors: Gangwar, S.P., Yelshanskaya, M.V., Yen, L.Y., Newton, T.P., Sobolevsky, A.I.
PDB entry 9n4m: Composite map for GluK2 in the apo state with 2-fold symmetrical ligand-binding domain
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2025-02-03
Authors: Gangwar, S.P., Yelshanskaya, M.V., Yen, L.Y., Newton, T.P., Sobolevsky, A.I.
PDB entry 9n4n: Composite map for GluK2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2025-02-03
Authors: Gangwar, S.P., Yelshanskaya, M.V., Yen, L.Y., Newton, T.P., Sobolevsky, A.I.
PDB entry 9n4o: Composite map for GluK2-0xNeto2 in the apo state with asymmetric ligand-binding domain
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-02-03
Authors: Gangwar, S.P., Yelshanskaya, M.V., Yen, L.Y., Newton, T.P., Sobolevsky, A.I.
PDB entry 9n4p: Composite map for GluK2-1xNeto2 in the apo state
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2025-02-03
Authors: Gangwar, S.P., Yelshanskaya, M.V., Yen, L.Y., Newton, T.P., Sobolevsky, A.I.
PDB entry 9n4q: Composite map for GluK2-2xNeto2 in the apo state
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2025-02-03
Authors: Gangwar, S.P., Yelshanskaya, M.V., Yen, L.Y., Newton, T.P., Sobolevsky, A.I.
PDB entry 9n4r: Composite map for GluK2-0xNeto2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2025-02-03
Authors: Gangwar, S.P., Yelshanskaya, M.V., Yen, L.Y., Newton, T.P., Sobolevsky, A.I.
PDB entry 9n4s: Composite map for GluK2-1xNeto2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2025-02-03
Authors: Gangwar, S.P., Yelshanskaya, M.V., Yen, L.Y., Newton, T.P., Sobolevsky, A.I.
PDB entry 9n4t: Composite map for GluK2-2xNeto2 in the open state, in complex with the positive allosteric modulator BPAM344 and agonist kainate
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2025-02-03
Authors: Gangwar, S.P., Yelshanskaya, M.V., Yen, L.Y., Newton, T.P., Sobolevsky, A.I.
PDB entry 9n4u: Crystal structure of PAK1 bound to compound R1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2025-02-03
Authors: Wang, W., Oh, A., Kiefer, J.R., Hsu, P.L.
PDB entry 9n4v: Azotobacter vinelandii extended type VI secretion system sheath tube complex
Classification: TRANSPORT PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.85 Å
Deposited: 2025-02-03
Authors: Warmack, R.A.
PDB entry 9n4w: Decameric Glucose-6-phosphate isomerase from Azotobacter vinelandii
Classification: ISOMERASE
Source organism: Azotobacter vinelandii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-02-03
Authors: Warmack, R.A., Maggiolo, A.O.
PDB entry 9n4x: CryoEM structure of the Azotobacter vinelandii glutamine synthetase
Classification: LIGASE
Source organism: Azotobacter vinelandii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-02-03
Authors: Warmack, R.A., Shen, Y.
PDB entry 9n4y: CryoEM structure of a filamentous soluble pyridine nucleotide transhydrogenase
Classification: FLAVOPROTEIN
Source organism: Azotobacter vinelandii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-02-03
Authors: Warmack, R.A.
PDB entry 9n4z: CCW Flagellar Switch Complex - FliF, FliG, FliM, and FliN forming 34-mer C-ring from Salmonella
Classification: MOTOR PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-02-03
Authors: Singh, P.K., Iverson, T.M.
PDB entry 9n50: Crosslinked Crystal Structure of Human Mitochondrial Ketosynthase, OXSM, and Crosslinker-crypto Human Mitochondrial Acyl Carrier Protein, C8aBr-mACP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-02-03
Authors: Suo, Y., Jiang, Z., Heberlig, G.W., Wang, E.Y., Chen, A., Sankaran, B., La Clair, J.J., Burkart, M.D.
PDB entry 9n51: Crosslinked Crystal Structure of Human Mitochondrial Ketosynthase, OXSM, and Crosslinker-crypto Human Mitochondrial Acyl Carrier Protein, C8Cl-mACP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2025-02-03
Authors: Suo, Y., Jiang, Z., Heberlig, G.W., Wang, E.Y., Chen, A., Sankaran, B., La Clair, J.J., Burkart, M.D.
PDB entry 9n54: Bipartite p63 NLS in complex with Importin Alpha 2
Classification: NUCLEAR PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-02-03
Authors: Esmaeili, S., Swarbrick, C.M.D., Forwood, J.K.
PDB entry 9n55: X-ray Crystallographic Structure of Lipid-bound Orf9b Homodimer
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-02-03
Authors: San Felipe, C.J., Fraser, J.S.
PDB entry 9n58: Structure of the PTP-like myo-inositol phosphatase from Solidesulfovibrio magneticus in complex with myo-inositol hexakisphosphate
Classification: HYDROLASE
Source organism: Solidesulfovibrio magneticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2025-02-03
Authors: Cleland, C.P., Mosimann, S.C.
PDB entry 9n59: CryoEM structure of the Azotobacter vinelandii flagellar filament
Classification: STRUCTURAL PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2025-02-03
Authors: Warmack, R.A.
PDB entry 9n5a: CryoEM structure of Azotobacter vinelandii bacterioferritin
Classification: METAL BINDING PROTEIN
Source organism: Azotobacter vinelandii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2025-02-03
Authors: Warmack, R.A.
PDB entry 9n5b: RNA polymerase II elongation complex containing 8-oxoG at +1 site, apo form
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2025-02-04
Authors: Oh, J., Wang, D.
PDB entry 9n5c: RNA polymerase II elongation complex with 8-oxoG at +1 site, CMPCPP-bound
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2025-02-04
Authors: Oh, J., Wang, D.
PDB entry 9n5d: RNA polymerase II elongation complex with 8-oxoG at +1 site, CMP added
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2025-02-04
Authors: Oh, J., Wang, D.
PDB entry 9n5e: RNA polymerase II elongation complex with 8-oxoG at +1 site, AMPCPP in E-site
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.75 Å
Deposited: 2025-02-04
Authors: Oh, J., Wang, D.
PDB entry 9n5f: RNA polymerase II elongation complex with 8-oxoG in syn-conformation with added AMP
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2025-02-04
Authors: Oh, J., Wang, D.
PDB entry 9n5g: RNA polymerase II elongation complex with 8-oxoG at +1 site, ATP in both A- and E-site
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2025-02-04
Authors: Oh, J., Wang, D.
PDB entry 9n5h: Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-02-04
Authors: Heide, F., Yoo, R., Ivanochko, D., Hailemariam, S., Bekkering, E., Julien, J.P.
PDB entry 9n5i: Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2025-02-04
Authors: Hailemariam, S., Heide, F., Bekkering, E., Ivanochko, D., Yoo, R., Julien, J.P.
PDB entry 9n5j: Cryo-EM structure of the magnesium transporter MgtA in the E2 conformation with bound beryllium fluoride (BeF3-) and Mg2+ at 2.65 A resolution.
Classification: TRANSPORT PROTEIN
Source organism: Lactococcus lactis subsp. lactis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2025-02-04
Authors: Khan, M.B., Primeau, J.O., Basu, P.C., Morth, J.P., Lemieux, M.J., Young, H.S.
PDB entry 9n5k: Endogenous Pfs230D9-14 in complex with Pfs48/45
Classification: CELL ADHESION
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2025-02-04
Authors: Heide, F., Ivanochko, D., Bekkering, E., Yoo, R., Hailemariam, S., Julien, J.P.
PDB entry 9n5l: The Red Crowned-Crane Parvovirus Capsid
Classification: VIRUS
Source organism: Red-crowned crane parvovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2025-02-04
Authors: Hsi, J., Mietzsch, M., McKenna, R.
PDB entry 9n5m: The Turkey Parvovirus Capsid structure
Classification: VIRUS
Source organism: Turkey parvovirus 260
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2025-02-04
Authors: Hsi, J., Mietzsch, M., McKenna, R.
PDB entry 9n5o: Endogenous Pfs230D7-8 in complex with 18F25
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.32 Å
Deposited: 2025-02-04
Authors: Jackman, J.J., Yoo, R., Ivanochko, D., Hailemariam, S., Bekkering, E., Julien, J.P.
PDB entry 9n5p: CRYSTAL STRUCTURE OF HUMAN IGG2 FC FRAGMENT-FC-GAMMA RECEPTOR IIA COMPLEX H131 VARIANT
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2025-02-04
Authors: Tolbert, W.D., Pazgier, M.
PDB entry 9n5q: X-ray structure of SARS-CoV-2 main protease M49I covalently bound to inhibitor GRL-051-22 at 1.50 A
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-02-04
Authors: Beechboard, S.N., Mesecar, A.D., Ghosh, A.K., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9n5t: Mycobacterium smegmatis 70S ribosome with small molecule drug MK-7762
Classification: RIBOSOME
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.01 Å
Deposited: 2025-02-04
Authors: Zhu, J.
PDB entry 9n5u: Structure of the Thermococcus sibiricus NfnABC complex
Classification: ELECTRON TRANSPORT
Source organism: Thermococcus sibiricus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2025-02-04
Authors: Xiao, X., Li, H.
PDB entry 9n5v: Structure of the NAD(H)-bound Thermococcus sibiricus NfnABC complex
Classification: ELECTRON TRANSPORT
Source organism: Thermococcus sibiricus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2025-02-04
Authors: Xiao, X., Li, H.
PDB entry 9n5x: The capsid structure of AAVpo.1
Classification: VIRUS
Source organism: Adeno-associated virus - Po1
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.79 Å
Deposited: 2025-02-04
Authors: Nelson, A., Mietzsch, M., McKenna, R.
PDB entry 9n5y: Hemagglutinin CA09 homotrimer bound to AEL31302/AEL31311 Fab
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (A/California/01/2009(H1N1))
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2025-02-04
Authors: Fernandez-Quintero, M.L., Turner, H.L.
PDB entry 9n5z: Hemagglutinin CA09 homotrimer bound to AMB38310/AMB38599 Fab
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (A/California/01/2009(H1N1))
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-02-04
Authors: Fernandez-Quintero, M.L., Raghavan, S.S.R., Gharpure, A., Turner, H.L., Ward, A.B.
PDB entry 9n61: Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL and ATP
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-02-04
Authors: Lee, J., Chen, J.
PDB entry 9n62: Transporter associated with antigen processing (TAP) EQ mutant bound to ATP in the inward-facing state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-02-04
Authors: Lee, J., Chen, J.
PDB entry 9n63: Transporter associated with antigen processing (TAP) EQ mutant bound to ATP in the outward-facing open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-02-04
Authors: Lee, J., Chen, J.
PDB entry 9n64: Transporter associated with antigen processing (TAP) EQ mutant bound to ATP in the outward-facing kinked state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-02-04
Authors: Lee, J., Chen, J.
PDB entry 9n65: Transporter associated with antigen processing (TAP) bound to ATP and ADP In the inward-facing conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-02-04
Authors: Lee, J., Manon, V., Chen, J.
PDB entry 9n66: Transporter associated with antigen processing (TAP) bound to ATP and ADP in the outward-facing open state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-02-04
Authors: Lee, J., Manon, V., Chen, J.
PDB entry 9n67: Crystal structure of dihydroorotate dehydrogenase from Leishmania braziliensis in complex with orotate
Classification: OXIDOREDUCTASE
Source organism: Leishmania braziliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-02-05
Authors: Froes, T.Q., Vaidergorn, M.M., Emery, F.S., Nonato, M.C.
PDB entry 9n68: Crystal structure of dihydroorotate dehydrogenase from Leishmania brasiliensis in complex with 5-(3-hydroxybenzylidene)pyrimidine-2,4,6(1H,3H,5H)-trione
Classification: OXIDOREDUCTASE
Source organism: Leishmania braziliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-02-05
Authors: Froes, T.Q., Vaidergorn, M.M., dos Santos, T., Leite, P.I.P.L., Godoi, B.F., Emery, F.S., Nonato, M.C.
PDB entry 9n69: Structure of the retron IA complex with HNH nuclease in the ""down"" orientation
Classification: Transferase/DNA/RNA
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2025-02-05
Authors: Burman, N., Thomas-George, J., Wilkinson, R., Wiedenheft, B.
PDB entry 9n6a: GP23 C-termimal receptor binding domain from TM4 phage
Classification: STRUCTURAL PROTEIN
Source organism: Aequorea victoria; Mycobacterium phage TM4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2025-02-05
Authors: Di, D., Rousseau, S., Krieger, I.V., Sacchettini, J.C.
PDB entry 9n6b: Structure of the retron IA complex with HNH nuclease in the ""up"" orientation
Classification: Transferase/DNA/RNA
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2025-02-05
Authors: Burman, N., Thomas-George, J., Wilkinson, R., Wiedenheft, B.
PDB entry 9n6c: Structure of the Retron IA Complex without the HNH Nuclease
Classification: Transferase/DNA/RNA
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2025-02-05
Authors: Burman, N., Thomas-George, J., Wilkinson, R., Wiedenheft, B.
PDB entry 9n6d: Dimeric structure of GM4951
Classification: LIPID BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2025-02-05
Authors: Raj, R., Beutler, B.
PDB entry 9n6e: L9-targeting immunogen bound to three copies of L9 Fab
Classification: IMMUNE SYSTEM/DE NOVO PROTEIN
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-02-05
Authors: Garfinkle, S.E., Lin, Z.J., Pallesen, J.
PDB entry 9n6f: X-ray structure of SARS-CoV-2 main protease M165I covalently bound to inhibitor GRL-051-22 at 1.90 A
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-02-05
Authors: Beechboard, S.N., Meadows, M.S., Ghosh, A.K., Center for Structural Biology of Infectious Diseases (CSBID), Mesecar, A.D.
PDB entry 9n6g: EGFR(T790M/V948R) in complex with LN2827
Classification: TRANSFERASE
Source organism: Spodoptera frugiperda
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2025-02-05
Authors: Chitnis, S.P., Hartman, T.J., Heppner, D.E.
PDB entry 9n6h: 2.54 A S.cerevisiae Chd1[L886G/L889G/L891G]-nucleosome 1:1 complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2025-02-05
Authors: Nodelman, I.M., Folkwein, H.J., Armache, J.-P., Bowman, G.D.
PDB entry 9n6i: 2.61 A S.cerevisiae Chd1[L886G/L889G/L891G]-nucleosome 2:1 complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2025-02-05
Authors: Nodelman, I.M., Folkwein, H.J., Armache, J.-P., Bowman, G.D.
PDB entry 9n6j: Room Temperature X-Ray Structure of SARS-CoV-2 Main Protease Mutant D48Y, P168 Deletion
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2025-02-05
Authors: Bhandari, D., Kovalevsky, A.
PDB entry 9n6k: 2.88 A S.cerevisiae Chd1[L886G/L889G/L891G]-nucleosome 2:1 complex with DNA-binding domain
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-02-05
Authors: Nodelman, I.M., Folkwein, H.J., Armache, J.-P., Bowman, G.D.
PDB entry 9n6l: Room Temperature X-Ray Structure of SARS-CoV-2 Main Protease Mutant D48Y, P168 Deletion in Complex with GC373
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-02-05
Authors: Bhandari, D., Kovalevsky, A.
PDB entry 9n6m: Room Temperature X-Ray Structure of SARS-CoV-2 Main Protease Mutant D48Y, P168 Deletion in Complex with Nirmatrelvir
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-02-05
Authors: Bhandari, D., Kovalevsky, A.
PDB entry 9n6n: Room Temperature X-Ray Structure of SARS-CoV-2 Main Protease Mutant D48Y, P168 Deletion in Complex with Pomotrelvir
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2025-02-05
Authors: Bhandari, D., Kovalevsky, A.
PDB entry 9n6o: Crystal structure of dihydroorotate dehydrogenase from Leishmania braziliensis in complex with 5-(4-hydroxy-3-methoxybenzyl)pyrimidine-2,4,6(1H,3H,5H)-trione
Classification: OXIDOREDUCTASE
Source organism: Leishmania braziliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-02-05
Authors: Froes, T.Q., Vaidergorn, M.M., Leite, P.I.P.L., Godoi, B.F., dos Santos, T., Emery, F.S., Nonato, M.C.
PDB entry 9n6p: Room Temperature X-Ray Structure of SARS-CoV-2 Main Protease Mutant D48Y, P168 Deletion in Complex with Ensitrelvir
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-02-05
Authors: Bhandari, D., Kovalevsky, A.
PDB entry 9n6q: Crystal structure of dihydroorotate dehydrogenase from Leishmania braziliensis in complex with 5-(4-hydroxy-3-methoxybenzyl)pyrimidine-2,4,6(1H,3H,5H)-trione
Classification: OXIDOREDUCTASE
Source organism: Leishmania braziliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2025-02-05
Authors: Froes, T.Q., Vaidergorn, M.M., Leite, P.I.P., Emery, F.S., Nonato, M.C.
PDB entry 9n6r: Room Temperature X-Ray Structure of SARS-CoV-2 Main Protease in Complex with Ensitrelvir
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-02-05
Authors: Bhandari, D., Kovalevsky, A.
PDB entry 9n6t: FnCas9 scaRNA gRNA 1101 DNA non-productive state
Classification: Hydrolase/DNA/RNA
Source organism: Francisella tularensis subsp. novicida; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2025-02-05
Authors: Hibshman, G.N., Taylor, D.W.
PDB entry 9n6u: Crystal structure of 18F25 malarial antibody
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-02-05
Authors: Yoo, R., Julien, J.P.
PDB entry 9n6v: SSU processome maturation and disassembly, State A
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n6w: SSU processome maturation and disassembly, State A*
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n6x: SSU processome maturation and disassembly, State B
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n6y: SSU processome maturation and disassembly, State C
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n6z: SSU processome maturation and disassembly, State D
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.74 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n70: SSU processome maturation and disassembly, State E
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.17 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n71: Tail tube structure of Acinetobacter baumannii phage Mystique
Classification: VIRAL PROTEIN
Source organism: Acinetobacter phage Mystique
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-02-05
Authors: Kopylov, M., Bobe, D., Alseth, O.E.
PDB entry 9n72: SSU processome maturation and disassembly, State F
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.94 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n73: SSU processome maturation and disassembly, State G
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.96 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n74: SSU processome maturation and disassembly, State H
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n75: SSU processome maturation and disassembly, State I
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n76: SSU processome maturation and disassembly, State J
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n77: SSU processome maturation and disassembly, State K
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n78: SSU processome maturation and disassembly, State L
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.17 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n79: SSU processome maturation and disassembly, State M
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n7a: SSU processome maturation and disassembly, State N
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n7b: SSU processome maturation and disassembly, State O
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2025-02-05
Authors: Buzovetsky, O., Klinge, S.
PDB entry 9n7d: Structure of the Rattus norvegicus ACE2 receptor bound HsItaly2011 RBD complex
Classification: HYDROLASE/VIRAL PROTEIN
Source organism: Merbecovirus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-02-05
Authors: Park, Y.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.