LiteFold/PDB huggingface dataset:
PDB entry 7itc: PanDDA analysis group deposition -- SARS-CoV-2 Nsp1 crystal H06a (dataset 1) from the F2X-Entry library screening campaign, data used for ground state calculation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-09-01
Authors: Lennartz, F., Weiss, M.S.
PDB entry 7itd: PanDDA analysis group deposition -- SARS-CoV-2 Nsp1 crystal H07a (dataset 2) from the F2X-Entry library screening campaign, data used for ground state calculation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2025-09-01
Authors: Lennartz, F., Weiss, M.S.
PDB entry 7ite: PanDDA analysis group deposition -- SARS-CoV-2 Nsp1 crystal H08a (dataset 1) from the F2X-Entry library screening campaign, data used for ground state calculation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2025-09-01
Authors: Lennartz, F., Weiss, M.S.
PDB entry 7itf: PanDDA analysis group deposition -- SARS-CoV-2 Nsp1 crystal H09a (dataset 2) from the F2X-Entry library screening campaign, data used for ground state calculation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2025-09-01
Authors: Lennartz, F., Weiss, M.S.
PDB entry 7itg: PanDDA analysis group deposition -- SARS-CoV-2 Nsp1 crystal H10a (dataset 1) from the F2X-Entry library screening campaign, data used for ground state calculation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2025-09-01
Authors: Lennartz, F., Weiss, M.S.
PDB entry 7ith: PanDDA analysis group deposition -- SARS-CoV-2 Nsp1 crystal H11a (dataset 1) from the F2X-Entry library screening campaign, data used for ground state calculation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2025-09-01
Authors: Lennartz, F., Weiss, M.S.
PDB entry 7iti: PanDDA analysis group deposition -- SARS-CoV-2 Nsp1 crystal H12a (dataset 1) from the F2X-Entry library screening campaign, data used for ground state calculation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2025-09-01
Authors: Lennartz, F., Weiss, M.S.
PDB entry 7jdw: CRYSTAL STRUCTURE OF HUMAN L-ARGININE:GLYCINE AMIDINOTRANSFERASE IN COMPLEX WITH DELTA-AMINO VALERIC ACID
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 1998-10-12
Authors: Fritsche, E., Humm, A., Huber, R.
PDB entry 7jfl: Crystal structure of human phosphorylated IRF-3 bound to CBP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2020-07-17
Authors: Li, P., Jing, T., Zhao, B.
PDB entry 7jfm: Crystal structure of mouse phosphorylated IRF-3 bound to CBP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2020-07-17
Authors: Li, P., Jing, T., Zhao, B.
PDB entry 7jfn: Crystal Structure of Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Brucella ovis, closed conformation
Classification: TRANSPORT PROTEIN
Source organism: Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-07-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7jfo: EPYC1(49-72)-bound Rubisco
Classification: PLANT PROTEIN, Lyase
Source organism: Chlamydomonas reinhardtii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.13 Å
Deposited: 2020-07-17
Authors: Matthies, D., Jonikas, M.C., He, S.
PDB entry 7jfp: GTP-specific succinyl-CoA synthetase complexed with Mg-GDP, phosphohistidine loop pointing towards nucleotide binding site
Classification: LIGASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-07-17
Authors: Huang, J., Fraser, M.E.
PDB entry 7jfq: The crystal structure of 3CL MainPro of SARS-CoV-2 with de-oxidized C145
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-07-17
Authors: Tan, K., Maltseva, N.I., Welk, L.F., Jedrzejczak, R.P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7jfr: Auristatin bound to tubulin
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-07-17
Authors: Moquist, P.N., Waight, A.
PDB entry 7jfs: The structure of the CBM32-1, CBM32-2, and M60 catalytic domains from Clostridium perfringens ZmpB
Classification: HYDROLASE
Source organism: Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.6 Å
Deposited: 2020-07-17
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 7jft: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J2 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.158 Å
Deposited: 2020-07-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jfu: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J5 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.164 Å
Deposited: 2020-07-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jfv: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J7 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2020-07-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jfw: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J10 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.012 Å
Deposited: 2020-07-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jfx: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J16 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2020-07-17
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jfy: GAS41 YEATS domain in complex with 5
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.10056 Å
Deposited: 2020-07-17
Authors: Linhares, B.M., Listunov, D., Winkler, A., Grembecka, J., Cierpicki, T.
PDB entry 7jfz: Structure of Urocanate hydratase from Legionella pneumophila bound to NAD
Classification: HYDROLASE
Source organism: Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-07-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7jg0: Human GAR transformylase in complex with GAR substrate and AGF102 inhibitor
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.984 Å
Deposited: 2020-07-18
Authors: Wong-Roushar, J., Dann III, C.E.
PDB entry 7jg1: Dimeric Immunoglobin A (dIgA)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-07-18
Authors: Kumar Bharathkar, S., Parker, B.P., Malyutin, A.G., Stadtmueller, B.M.
PDB entry 7jg2: Secretory Immunoglobin A (SIgA)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-07-18
Authors: Kumar Bharathkar, S., Parker, B.P., Malyutin, A.G., Stadtmueller, B.M.
PDB entry 7jg3: Human GAR transformylase in complex with GAR substrate and AGF103 inhibitor
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.091 Å
Deposited: 2020-07-18
Authors: Wong-Roushar, J., Dann III, C.E.
PDB entry 7jg4: Human GAR transformylase in complex with GAR substrate and AGF131 inhibitor
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.455 Å
Deposited: 2020-07-18
Authors: Wong-Roushar, J., Dann III, C.E.
PDB entry 7jg5: Cryo-EM structure of bedaquiline-free Mycobacterium smegmatis ATP synthase rotational state 1
Classification: TRANSLOCASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-07-18
Authors: Guo, H., Courbon, G.M., Rubinstein, J.L.
PDB entry 7jg6: Cryo-EM structure of bedaquiline-free Mycobacterium smegmatis ATP synthase rotational state 2 (backbone model)
Classification: TRANSLOCASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-07-18
Authors: Guo, H., Courbon, G.M., Rubinstein, J.L.
PDB entry 7jg7: Cryo-EM structure of bedaquiline-free Mycobacterium smegmatis ATP synthase rotational state 3 (backbone model)
Classification: TRANSLOCASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-07-18
Authors: Guo, H., Courbon, G.M., Rubinstein, J.L.
PDB entry 7jg8: Cryo-EM structure of bedaquiline-saturated Mycobacterium smegmatis ATP synthase rotational state 1 (backbone model)
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-07-18
Authors: Guo, H., Courbon, G.M., Rubinstein, J.L.
PDB entry 7jg9: Cryo-EM structure of bedaquiline-saturated mycobacterium smegmatis ATP synthase rotational state 2 (backbone model)
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-07-18
Authors: Guo, H., Courbon, G.M., Rubinstein, J.L.
PDB entry 7jga: Cryo-EM structure of bedaquiline-saturated Mycobacterium smegmatis ATP synthase rotational state 3
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-07-18
Authors: Guo, H., Courbon, G.M., Rubinstein, J.L.
PDB entry 7jgb: Cryo-EM structure of bedaquiline-free Mycobacterium smegmatis ATP synthase FO region
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-07-18
Authors: Guo, H., Courbon, G.M., Rubinstein, J.L.
PDB entry 7jgc: Cryo-EM structure of bedaquiline-saturated Mycobacterium smegmatis ATP synthase FO region
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-07-18
Authors: Guo, H., Courbon, G.M., Rubinstein, J.L.
PDB entry 7jgd: Cryo-EM structure of P. falciparum VAR2CSA FCR3 core at 3.4 A
Classification: SUGAR BINDING PROTEIN
Source organism: Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2020-07-19
Authors: Ma, R., Tolia, N.H.
PDB entry 7jge: Cryo-EM structure of P. falciparum VAR2CSA FCR3 core at 4 A
Classification: SUGAR BINDING PROTEIN
Source organism: Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-07-19
Authors: Ma, R., Tolia, N.H.
PDB entry 7jgf: Cryo-EM structure of P. falciparum VAR2CSA FCR3 domains DBL5 and DBL6 at 4.69 A
Classification: SUGAR BINDING PROTEIN
Source organism: Plasmodium falciparum
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.69 Å
Deposited: 2020-07-19
Authors: Ma, R., Tolia, N.H.
PDB entry 7jgg: Cryo-EM structure of P. falciparum VAR2CSA NF45 DBL5 and DBL6 domains at 4.88 A
Classification: SUGAR BINDING PROTEIN
Source organism: Plasmodium falciparum (isolate NF54)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.88 Å
Deposited: 2020-07-19
Authors: Ma, R., Tolia, N.H.
PDB entry 7jgh: Cryo-EM structure of P. falciparum VAR2CSA NF54 core in complex with CSA at 3.36 A
Classification: SUGAR BINDING PROTEIN
Source organism: Plasmodium falciparum (isolate NF54)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2020-07-19
Authors: Ma, R., Tolia, N.H.
PDB entry 7jgi: NMR structure of the cNTnC-cTnI chimera bound to A7
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-07-19
Authors: Cai, F., Robertson, I.M., Kampourakis, T., Klein, B.A., Sykes, B.D.
PDB entry 7jgj: IgA1 Protease in complex with neutralizing mAb
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Streptococcus pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2020-07-19
Authors: Eisenmesser, E.Z., Zheng, H.
PDB entry 7jgk: Crystal Structure of the Ni-bound Human Heavy-chain variant 122H-delta C-star with 2,5-furandihyrdoxamate collected at 100K
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2020-07-19
Authors: Bailey, J.B., Tezcan, F.A.
PDB entry 7jgl: Crystal Structure of the Zn-bound Human Heavy-chain variant 122H-delta C-star with 2,5-furandihyrdoxamate collected at 100K
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2020-07-19
Authors: Bailey, J.B., Tezcan, F.A.
PDB entry 7jgm: Crystal Structure of the Ni-bound Human Heavy-chain variant 122H-delta C-star with meta-benzenedihyrdoxamate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2020-07-19
Authors: Bailey, J.B., Tezcan, F.A.
PDB entry 7jgn: Crystal Structure of the Zn-bound Human Heavy-chain variant 122H-delta C-star with meta-benzenedihyrdoxamate collected at 100K
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2020-07-19
Authors: Bailey, J.B., Tezcan, F.A.
PDB entry 7jgo: Crystal Structure of the Ni-bound Human Heavy-chain variant 122H-delta C-star with 2,5-furandihyrdoxamate collected at 278K
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2020-07-19
Authors: Bailey, J.B., Tezcan, F.A.
PDB entry 7jgp: Crystal Structure of the Ni-bound Human Heavy-chain variant 122H-delta C-star with 2,5-furandihyrdoxamate at 318K
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 6.42 Å
Deposited: 2020-07-19
Authors: Bailey, J.B., Tezcan, F.A.
PDB entry 7jgq: Crystal Structure of the Ni-bound Human Heavy-chain variant 122H-delta C-star with 2,5-furandihyrdoxamate collected at 278K after one heating/cooling cycle
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2020-07-19
Authors: Bailey, J.B., Tezcan, F.A.
PDB entry 7jgr: Structure of Drosophila ORC bound to DNA (84 bp) and Cdc6
Classification: REPLICATION
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-07-19
Authors: Schmidt, J.M., Bleichert, F.
PDB entry 7jgs: Structure of Drosophila ORC bound to poly(dA/dT) DNA and Cdc6 (conformation 2)
Classification: REPLICATION
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-07-19
Authors: Schmidt, J.M., Bleichert, F.
PDB entry 7jgt: Crystal Structure of FN3tt
Classification: STRUCTURAL PROTEIN
Source organism: Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-07-19
Authors: Luo, J., Malia, T.J.
PDB entry 7jgu: Structure of FN3tt mut
Classification: STRUCTURAL PROTEIN
Source organism: Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-07-19
Authors: Luo, J., Boucher, L.E.
PDB entry 7jgv: CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH COMPOUND 1620116, CRYSTAL FORM 2
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-07-19
Authors: Lee, M., Fairlie, W.D., Smith, B.J., Lee, E.F.
PDB entry 7jgw: Crystal structure of BCL-XL in complex with COMPOUND 1620116, CRYSTAL FORM 1
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-07-19
Authors: Lee, M., Fairlie, W.D., Smith, B.J., Lee, E.F.
PDB entry 7jgx: Solution NMR structure of neuroVAL, a derived peptide from wasp
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-07-20
Authors: Muller, J.A.I., Craik, D.J., Koehbach, J.
PDB entry 7jgy: Solution NMR structure of protonectin, a peptide from wasp
Classification: ANTIMICROBIAL PROTEIN
Source organism: Parachartergus fraternus
Experimental method: SOLUTION NMR
Deposited: 2020-07-20
Authors: Muller, J.A.I., Craik, D.J., Koehbach, J.
PDB entry 7jgz: Protocadherin gammaC4 EC1-4 crystal structure
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.51 Å
Deposited: 2020-07-20
Authors: Goodman, K.M., Mannepalli, S., Honig, B., Shapiro, L.
PDB entry 7jh0: Crystallographic structure of glyceraldehyde-3-phosphate dehydrogenase from Schistosoma mansoni
Classification: OXIDOREDUCTASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2020-07-20
Authors: Boreiko, S., Silva, M., Iulek, J.
PDB entry 7jh1: Solution structure of a reconstructed XCL1 ancestor
Classification: CYTOKINE
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2020-07-20
Authors: Tyler, R.C., Peterson, F.C., Volkman, B.F.
PDB entry 7jh2: CRYSTAL STRUCTURE OF RAR-RELATED ORPHAN RECEPTOR C IN COMPLEX WITH A POTENT, SELECTIVE AND ORALLY BIOAVAILABLE ROR-GAMMA-T INVERSE AGONIST
Classification: TRANSCRIPTION/AGONIST
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.367 Å
Deposited: 2020-07-20
Authors: Sack, J.S.
PDB entry 7jh3: Crystal structure of 4-aminobutyrate aminotransferase PuuE from Escherichia coli in complex with PLP
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2020-07-20
Authors: Valleau, D., Evdokimova, E., Stogios, P.J., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7jh4: Crystal structure of NAD(P)H-flavin oxidoreductase (NfoR) from S. aureus complexed with reduced FMN and NAD+
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-07-20
Authors: Zheng, Y., O'Neill, A.G., Beaupre, B.A., Liu, D., Moran, G.R.
PDB entry 7jh5: Co-LOCKR: de novo designed protein switch
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.103 Å
Deposited: 2020-07-20
Authors: Bick, M.J., Lajoie, M.J., Boyken, S.E., Sankaran, B., Baker, D.
PDB entry 7jh6: De novo designed two-domain di-Zn(II) and porphyrin-binding protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2020-07-20
Authors: Schmidt, N., Liu, L., DeGrado, W.F.
PDB entry 7jh7: cardiac actomyosin complex
Classification: MOTOR PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-07-20
Authors: Galkin, V.E., Schroeder, G.F.
PDB entry 7jh8: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J20 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.087 Å
Deposited: 2020-07-20
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jh9: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J22 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.094 Å
Deposited: 2020-07-20
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jha: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J23 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.107 Å
Deposited: 2020-07-20
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jhb: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J24 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.114 Å
Deposited: 2020-07-20
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jhc: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J26 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2020-07-20
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jhd: Estrogen Receptor Alpha Ligand Binding Domain Y537S in Complex with TTC-352 and GRIP Peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2020-07-20
Authors: Fanning, S.W., Abderraman, B., Maximov, P.Y., Jordan, V.C., Greene, G.L.
PDB entry 7jhe: Room Temperature Structure of SARS-CoV-2 Nsp10/Nsp16 Methyltransferase in a Complex with 2'-O-methylated m7GpppA Cap-1 and SAH Determined by Fixed-Target Serial Crystallography
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-07-20
Authors: Wilamowski, M., Sherrell, D.A., Minasov, G., Kim, Y., Shuvalova, L., Lavens, A., Chard, R., Rosas-Lemus, M., Maltseva, N., Jedrzejczak, R., Michalska, K., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7jhf: Solution NMR structure of protonectin-F, a derived peptide from wasp
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-07-20
Authors: Muller, J.A.I., Craik, D.J., Koehbach, J.
PDB entry 7jhg: Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Dorsomorphin (Compound C) and Fab-nanobody
Classification: TRANSFERASE/IMMUNE SYSTEM
Source organism: Escherichia coli K-12; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2020-07-20
Authors: Yan, Y., Murkherjee, S., Zhou, X.E., Xu, T.H., Xu, H.E., Kossiakoff, A.A., Melcher, K.
PDB entry 7jhh: Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Fab and nanobody
Classification: TRANSFERASE/IMMUNE SYSTEM
Source organism: Escherichia coli K-12; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2020-07-20
Authors: Yan, Y., Murkherjee, S., Zhou, X.E., Xu, T.H., Xu, H.E., Kossiakoff, A.A., Melcher, K.
PDB entry 7jhi: Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 iodide-derivative
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-07-20
Authors: Hao, Y., Huang, X.
PDB entry 7jhj: Structure of the Epstein-Barr virus GPCR BILF1 in complex with human Gi
Classification: MEMBRANE PROTEIN
Source organism: Epstein-Barr virus; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-07-20
Authors: Tsutsumi, N., Qu, Q.H., Skiniotis, G., Garcia, K.C.
PDB entry 7jhk: Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 in unliganded form
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3436 Å
Deposited: 2020-07-20
Authors: Hao, Y., Huang, X.
PDB entry 7jhl: Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 with UDP-N-acetylglucosamine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2020-07-20
Authors: Hao, Y., Huang, X.
PDB entry 7jhm: Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 with N-acetyl-lactosamine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2020-07-20
Authors: Hao, Y., Huang, X.
PDB entry 7jhn: Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 with UDP and trisaccharide GlcNAc-beta1-3Gal-beta1-4GlcNAc
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-07-21
Authors: Hao, Y., Huang, X.
PDB entry 7jho: Structure of human beta 1,3-N-acetylglucosaminyltransferase 2 with UDP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-07-21
Authors: Hao, Y., Huang, X.
PDB entry 7jhp: Crystal structure of HRas in complex with the Ras-binding and cysteine-rich domains of CRaf-kinase
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.766 Å
Deposited: 2020-07-21
Authors: Cookis, T., Mattos, C.
PDB entry 7jhq: OXA-48 bound by Compound 2.3
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-07-21
Authors: Taylor, D.M., Hu, L., Prasad, B.V.V., Palzkill, T.
PDB entry 7jhr: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J4 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.158 Å
Deposited: 2020-07-21
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jhs: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J5 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.096 Å
Deposited: 2020-07-21
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jht: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J31 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2020-07-21
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jhu: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J33 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.152 Å
Deposited: 2020-07-21
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jhv: Self-assembly of a 3D DNA crystal lattice (4x6 junction version) containing the J36 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.058 Å
Deposited: 2020-07-21
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jhw: The internal aldimine crystal structure of Salmonella typhimurium Tryptophan Synthase mutant beta-S377A in complex with inhibitor 2-({[4-(trifluoromethoxy)phenyl]sulfonyl}amino)ethyl dihydrogen phosphate (F9F) at the alpha-site and Cesium ion at the metal coordination site
Classification: LYASE/LYASE INHIBITOR
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-07-21
Authors: Hilario, E., Mueller, L.J., Dunn, M.F.
PDB entry 7jhx: Crystal structure of hEPG5 LIR/GABARAPL1 complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2020-07-21
Authors: Cheung, Y.W.S., Yip, C.K.
PDB entry 7jhy: Type IV-B CRISPR Complex
Classification: IMMUNE SYSTEM/RNA
Source organism: Mycobacterium sp. JS623
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-07-21
Authors: Bravo, J.P.K., Taylor, D.W.
PDB entry 7jhz: Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain BM13851 in complex with LNDFH I
Classification: VIRAL PROTEIN
Source organism: Human rotavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2020-07-21
Authors: Xu, S., Stuckert, M.R., McGinnis, K.R., Jiang, X., Kennedy, M.A.
PDB entry 7ji0: CryoEM structure of Streptococcus thermophilus SHP pheromone receptor Rgg3 in complex with SHP3
Classification: DNA BINDING PROTEIN
Source organism: Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311); Streptococcus thermophilus CNRZ1066
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2020-07-21
Authors: Petrou, V.I., Capodagli, G.C., Kaelber, J.T., Neiditch, M.B.
PDB entry 7ji1: NMR structure of the Streptococcus pyogenes NAD+-glycohydrolase translocation domain
Classification: TOXIN
Source organism: Streptococcus pyogenes
Experimental method: SOLUTION NMR
Deposited: 2020-07-22
Authors: Velarde, J.J., Piai, A., Chou, J.J., Wessels, M.
PDB entry 7ji2: Crystal Structure of H2-Kb in complex with a OVA mutant peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus bactrianus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-07-22
Authors: Li, X., Mallis, R.J., Mizsei, R., Tan, K., Reinherz, E.L., Wang, J.
PDB entry 7ji3: Cryo-EM structure of a proton-activated chloride channel
Classification: TRANSPORT PROTEIN
Source organism: Takifugu bimaculatus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2020-07-22
Authors: Deng, Z., Zhang, J., Yuan, P.
PDB entry 7ji4: Universal stress protein (USP) domain of KdpD histidine kinase in complex with second messenger c-di-AMP
Classification: SIGNALING PROTEIN
Source organism: Staphylococcus aureus subsp. aureus MRSA252
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-22
Authors: Dutta, A., Parashar, V.
PDB entry 7ji5: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J36 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.702 Å
Deposited: 2020-07-22
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7ji6: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J34 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.005 Å
Deposited: 2020-07-22
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7ji7: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J33 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.105 Å
Deposited: 2020-07-22
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7ji8: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J31 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2020-07-22
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7ji9: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J30 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.103 Å
Deposited: 2020-07-22
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jia: Structure of truncated zebrafish granulin AaE
Classification: SIGNALING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-07-23
Authors: Takjoo, R., Daly, N.L.
PDB entry 7jib: Room Temperature Crystal Structure of Nsp10/Nsp16 from SARS-CoV-2 with Substrates and Products of 2'-O-methylation of the Cap-1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-07-23
Authors: Wilamowski, M., Minasov, G., Kim, Y., Sherrell, D.A., Shuvalova, L., Lavens, A., Chard, R., Rosas-Lemus, M., Maltseva, N., Jedrzejczak, R., Michalska, K., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7jic: Structure of human CD19-CD81 co-receptor complex bound to coltuximab Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-07-23
Authors: Susa, K.J., Rawson, S., Kruse, A.C., Blacklow, S.C.
PDB entry 7jid: Crystal structure of the L780 UDP-rhamnose synthase from Acanthamoeba polyphaga mimivirus
Classification: OXIDOREDUCTASE
Source organism: Acanthamoeba polyphaga mimivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-07-23
Authors: Bockhaus, N.J., Ferek, J.D., Thoden, J.B., Holden, H.M.
PDB entry 7jie: Structure of GII.4 P-domain in Complex with NORO-320 FAB
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
Experimental method: X-RAY DIFFRACTION
Resolution: 2.254 Å
Deposited: 2020-07-23
Authors: Salmen, W., Hu, L., Prasad, B.
PDB entry 7jif: HRAS A59T GppNHp
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.757 Å
Deposited: 2020-07-23
Authors: Johnson, C.W., Haigis, K.M.
PDB entry 7jig: HRAS A59T GppNHp crystal 2
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.322 Å
Deposited: 2020-07-23
Authors: Johnson, C.W., Haigis, K.M.
PDB entry 7jih: HRAS A59E GppNHp
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.989 Å
Deposited: 2020-07-23
Authors: Johnson, C.W., Haigis, K.M.
PDB entry 7jii: HRAS A59E GDP
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.532 Å
Deposited: 2020-07-23
Authors: Johnson, C.W., Haigis, K.M.
PDB entry 7jij: ATP-bound AMP-activated protein kinase
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 5.5 Å
Deposited: 2020-07-23
Authors: Yan, Y., Zhou, X.E., Powell, K., Xu, T., Brunzelle, J.S., Xu, H.X., Melcher, K.
PDB entry 7jik: Human recombinant Beta-2-Glycoprotein 1
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2020-07-23
Authors: Klenotic, P.A., Yu, E.W.Y.
PDB entry 7jil: 70S ribosome Flavobacterium johnsoniae
Classification: RIBOSOME
Source organism: Flavobacterium johnsoniae; Flavobacterium sp. Root186
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-07-23
Authors: Ortega, J.
PDB entry 7jim: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J26 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.015 Å
Deposited: 2020-07-23
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jin: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J24 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.909 Å
Deposited: 2020-07-23
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jio: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J23 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2020-07-23
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jip: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J22 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.163 Å
Deposited: 2020-07-23
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jiq: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J21 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2020-07-23
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jir: The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, in complex with PLP_Snyder457 inhibitor
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2020-07-23
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7jis: HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 2F
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2020-07-23
Authors: Lesburg, C.A., Augustin, M.
PDB entry 7jit: The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, in complex with PLP_Snyder495 inhibitor
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-07-23
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7jiu: HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 2F
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2020-07-23
Authors: Lesburg, C.A., Augustin, M.
PDB entry 7jiv: The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, in complex with PLP_Snyder530 inhibitor
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-07-23
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7jiw: The crystal structure of Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder530 inhibitor
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-07-23
Authors: Osipiuk, J., Tesar, C., Endres, M., Lisnyak, V., Maki, S., Taylor, C., Zhang, Y., Zhou, Z., Azizi, S.A., Jones, K., Kathayat, R., Snyder, S.A., Dickinson, B.C., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7jix: Murine antibody that engages the influenza hemagglutinin receptor binding site
Classification: Viral protein/IMMUNE SYSTEM
Source organism: Influenza A virus (A/Mexico/UASLP-006/2008(H1N1)); Influenza A virus (A/Solomon Islands/3/2006 (Egg passage)(H1N1)); Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.901 Å
Deposited: 2020-07-23
Authors: Bajic, G., Schmidt, A.G.
PDB entry 7jiy: Structure of truncated zebrafish paragranulin
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2020-07-23
Authors: Takjoo, R., Daly, N.L.
PDB entry 7jiz: Dienelactone hydrolase family protein ScDLH from Solimonas sp. K1W22B-7
Classification: HYDROLASE
Source organism: Solimonas sp. K1W22B-7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-07-24
Authors: Schnettler Fernandez, J.D.F., Campbell, E.C., Hollfelder, F.H.
PDB entry 7jj0: GTP-specific succinyl-CoA synthetase complexed with Mg-GMPPCP
Classification: LIGASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-07-24
Authors: Huang, J., Fraser, M.E.
PDB entry 7jj1: Crystal structure of the sterol 14alpha-demethylase-ferredoxin (CYP51-fx) heme domain and architectural comparison to the whole fusion protein
Classification: OXIDOREDUCTASE
Source organism: Methylococcus capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-07-24
Authors: Zhao, B., Lamb, D.C.
PDB entry 7jj2: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J19 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.007 Å
Deposited: 2020-07-24
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jj3: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J16 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.987 Å
Deposited: 2020-07-24
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jj4: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J14 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.022 Å
Deposited: 2020-07-24
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jj5: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J10 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.794 Å
Deposited: 2020-07-24
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jj6: Self-assembly of a 3D DNA crystal lattice (4x6 scramble junction version) containing the J8 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.077 Å
Deposited: 2020-07-24
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jj8: Crystal structure of the Zn(II)-bound ZnuA-like domain of Streptococcus pneumoniae AdcA
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2020-07-24
Authors: Luo, Z., More, J.R., Kobe, B., McDevitt, C.A.
PDB entry 7jj9: Crystal structure of Zn(II)-bound AdcA from Streptococcus pneumoniae
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-07-24
Authors: Luo, Z., More, J.R., Kobe, B., McDevitt, C.A.
PDB entry 7jja: Crystal structure of the ZinT-like domain of Streptococcus pneumoniae AdcA in the apo form
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2020-07-24
Authors: Luo, Z., More, J.R., Kobe, B., McDevitt, C.A.
PDB entry 7jjb: Crystal structure of Zn(II)-bound ZinT-like domain of Streptococcus pneumoniae AdcA
Classification: METAL BINDING PROTEIN
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2020-07-24
Authors: Luo, Z., More, J.R., Kobe, B., McDevitt, C.A.
PDB entry 7jjc: Crystal structure of neuropilin-1 b1 domain in complex with SARS-CoV-2 S1 C-end rule (CendR) peptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2020-07-25
Authors: Chen, K.-E., Collins, B.M.
PDB entry 7jjd: Sarcin-ricin loop with guanosine monothiophosphate residue.
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2020-07-25
Authors: Pallan, P.S., Egli, M., Harp, J.M.
PDB entry 7jje: Sarcin-ricin loop with guanosine dithiophosphate residue.
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-07-25
Authors: Pallan, P.S., Egli, M., Harp, J.M.
PDB entry 7jjf: Sarcin-ricin loop with modified residue.
Classification: DNA-RNA HYBRID
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-07-25
Authors: Harp, J.M., Pallan, P.S., Egli, M.
PDB entry 7jjg: Crystal structure of the second bromodomain (BD2) of human TAF1 bound to ATR kinase inhibitor AZ20
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-07-25
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7jjh: Crystal structure of the unliganded tandem bromodomain (BD1, BD2) of human TAF1
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-07-25
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7jji: Structure of SARS-CoV-2 3Q-2P full-length prefusion spike trimer (C3 symmetry)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-07-26
Authors: Bangaru, S., Turner, H.L., Ozorowski, G., Antanasijevic, A., Ward, A.B.
PDB entry 7jjj: Structure of SARS-CoV-2 3Q-2P full-length dimers of spike trimers
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2020-07-26
Authors: Bangaru, S., Turner, H.L., Ozorowski, G., Antanasijevic, A., Ward, A.B.
PDB entry 7jjk: Crystal structure of SOX30
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-07-27
Authors: Ghafoori, S.M., Forwood, J.K.
PDB entry 7jjl: Crystal structure of Importin Alpha 3 in complex with human LSD1 NLS
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-07-27
Authors: Tu, W.J., McCuaig, R., Tan, H.Y.A., Hardy, K., Seddiki, N., Ali, S., Dahlstrom, J.E., Bean, E.G., Dunn, J., Forwood, J.K., Tsimbalyuk, S., Smith, K., Yip, D., Malik, L., Prasana, T., Milburn, P., Rao, S.
PDB entry 7jjm: Crystal structure of Importin alpha 2 in complex with LSD1 NLS
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2020-07-27
Authors: Tu, W.J., McGuaig, R., Tan, H.Y.A., Hardy, C., Seddiki, N., Ali, S., Dahlstrom, J.E., Bean, E.G., Dunn, J., Forwood, J.K., Tsimbalyuk, S., Smith, K.M., Yip, D., Malik, L., Prasana, T., Milburn, P., Rao, S.
PDB entry 7jjn: Eubacterium rectale Amy13B (EUR_01860)
Classification: HYDROLASE
Source organism: [Eubacterium] rectale DSM 17629
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-07-27
Authors: Koropatkin, N.M., Cockburn, D.W., Cerqueira, F.M.