LiteFold/PDB huggingface dataset:
PDB entry 9kp8: Crystal structure of FAD-dependent oxidase CpaO
Classification: OXIDOREDUCTASE
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.179 Å
Deposited: 2024-11-22
Authors: Chang, C.Y., Kuo, Y.M., Cheng, T., Liang, C.H., Hsiao, P.Y., Lin, Y.C., Wang, N.
PDB entry 9kp9: PfDXR - Mn2+ - NADPH - TAKK443 quaternary complex
Classification: ISOMERASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2024-11-22
Authors: Takada, S., Sakamoto, Y., Tanaka, N.
PDB entry 9kpa: Crystal structure of Horse spleen L-ferritin mutant (R59F)
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-22
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.
PDB entry 9kpb: Crystal structure of human CASTOR2 in apo form
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-11-22
Authors: Liu, C., Ding, J., Zhang, T.
PDB entry 9kpd: Cryo-EM structure of GPCR16-miniGs complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Streptococcus pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-11-22
Authors: Wang, X., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 9kpe: Cryo-EM structure of GPCR16-GiH5 complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Streptococcus pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-11-22
Authors: Wang, X., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 9kpf: Cryo-EM structure of GPCR16-Gi complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Streptococcus pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-11-22
Authors: Wang, X., Wu, L.J., Hua, T., Liu, Z.J.
PDB entry 9kpg: Crystal structure of human CASTOR2-arginine
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-11-22
Authors: Liu, C., Ding, J., Zhang, T.
PDB entry 9kph: Fusobacterium nucleatum ARRPOF RNA dimer conformation 2
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2024-11-22
Authors: Tu, Y.F., Shang, S.T., Su, Z.M.
PDB entry 9kpi: Aromatic acetyl piperidine derivatives as soluble epoxide hydrolase inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-11-22
Authors: Wang, H., Feng, Y., Du, X.Y.
PDB entry 9kpj: Crystal structure of Helicobacter pylori chemoreceptor TlpA ligand-binding domain in complex with indole
Classification: SIGNALING PROTEIN
Source organism: Helicobacter pylori PMSS1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2024-11-22
Authors: Wang, X., Bi, S.Y.
PDB entry 9kpl: Crystal structure of T. rubripes Mincle with glucose
Classification: IMMUNE SYSTEM
Source organism: Takifugu rubripes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-11-23
Authors: Ito, T., Nagae, M., Yamasaki, S.
PDB entry 9kpm: Crystal structure of KRAS-G12C in complex with compound 16 (JAB-16)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2024-11-23
Authors: Li, S., Dang, C., Fan, X., Zhang, W., Wang, P., Qian, D., Wang, Y., Li, A.
PDB entry 9kpn: Crystal structure of KRAS-G12C in complex with Compound 20 (JAB-20)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2024-11-23
Authors: Li, S., Dang, C., Fan, X., Zhang, W., Wang, P., Qian, D., Wang, Y., Li, A.
PDB entry 9kpo: Fusobacterium nucleatum ARRPOF RNA dimer conformation 1
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Deposited: 2024-11-23
Authors: Tu, Y.F., Shang, S.T., Su, Z.M.
PDB entry 9kpp: Crystal structure of FrazP2
Classification: OXIDOREDUCTASE
Source organism: Actinomadura sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-11-23
Authors: Zhang, F., Chen, X.R.
PDB entry 9kpq: A ThDP-dependent enzyme belonging to the 1-deoxy-D-xylulose-5-phosphate synthase (DXPS)-like subfamily
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2024-11-23
Authors: Xing, B.Y., Ma, M.
PDB entry 9kpr: Crystal structure of a allulose transcriptional regulator from Agrobacterium fabrum
Classification: TRANSCRIPTION
Source organism: Agrobacterium fabrum str. C58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2024-11-24
Authors: Wei, H.L., Dong, Q.Z., Liu, W.D., Yang, J.G., Sun, Y.X.
PDB entry 9kps: Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-11-24
Authors: Li, Z.W., Ye, Y., Yang, G.F.
PDB entry 9kpt: Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in UQ1-bound state
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2024-11-24
Authors: Li, Z.W., Ye, Y., Yang, G.F.
PDB entry 9kpu: Crystal structure of FrazP2 in complex with forazoline C
Classification: OXIDOREDUCTASE
Source organism: Actinomadura sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-11-24
Authors: Zhang, F., Chen, X.R.
PDB entry 9kpv: Crystal structure of enzyme
Classification: LIGASE/ANTIBIOTIC
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2024-11-24
Authors: Li, L., Lin, L.Y., Liu, C., Hao, Z.Y., Zhang, J., Xiang, W.S., Yuchi, Z.G.
PDB entry 9kpw: UDP-glycosyltransferase TsUGT1 with UDP
Classification: TRANSFERASE
Source organism: Trifolium subterraneum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-11-24
Authors: Feng, X., Sun, Q.
PDB entry 9kpx: UDP-glycosyltransferase TsUGT1 with UDP and 3-Glc-30-S-Glc-GA
Classification: TRANSFERASE
Source organism: Trifolium subterraneum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2024-11-24
Authors: Feng, X., Sun, Q., Meng, L.
PDB entry 9kpy: Structure of Phosphopantetheine adenylyltransferase (PPAT) from Enterobacter spp. with the expression tag bound in the substrate binding site of a neighbouring molecule at 2.20 A resolution.
Classification: TRANSFERASE
Source organism: Enterobacter sp. 638
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-11-24
Authors: Ahmad, N., Sharma, P., Sharma, S., Singh, T.P.
PDB entry 9kpz: Structure of TolQRA complex at pH 5.4 from E.coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-11-24
Authors: Dong, C., Zhang, Z.
PDB entry 9kq0: Structure of TolQRA complex at pH 8.0 from E.coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-11-24
Authors: Dong, C., Zhang, Z.
PDB entry 9kq1: Crystal structure of L-2-keto-3-deoxypentonate 4-dehydrogenase bound to NAD(H)
Classification: OXIDOREDUCTASE
Source organism: Herbaspirillum huttiense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-11-25
Authors: Akagashi, M., Watanabe, S.
PDB entry 9kq2: Cryo-EM structure of RNF168'-RNF168-UbcH5c complex bound to nucleosome
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-11-25
Authors: Zhu, H.Q.
PDB entry 9kq3: Cryo-EM structure of Saccharomyces cerevisiae Mitochondrial Respiratory Complex II in pydiflumetofen-bound state
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-11-25
Authors: Li, Z.W., Ye, Y., Yang, G.F.
PDB entry 9kq4: The structure of YcfC from Erwinia amylovora as a C-S lyase
Classification: LYASE
Source organism: Erwinia amylovora ATCC 49946
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-11-25
Authors: Zhang, L., Dou, C., Zheng, Y.H., Zhu, X.F., Cheng, W.
PDB entry 9kq6: The structure of the apo-YcfA from Erwinia amylovora
Classification: BIOSYNTHETIC PROTEIN
Source organism: Erwinia amylovora ATCC 49946
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-11-25
Authors: Zhang, L., Dou, C., Zheng, Y.H., Zhu, X.F., Cheng, W.
PDB entry 9kq7: The structure of the YcfA from Erwinia amylovora bound with ATP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Erwinia amylovora ATCC 49946
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2024-11-25
Authors: Zhang, L., Dou, C., Zheng, Y.H., Zhu, X.F., Cheng, W.
PDB entry 9kq8: Cryo-EM structure of human VMAT2 in complex with valbenazine
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2024-11-25
Authors: Wei, F., Zhang, W., Zhang, Y.
PDB entry 9kq9: The structure of the YcfA-GTP from Erwinia amylovora
Classification: BIOSYNTHETIC PROTEIN
Source organism: Erwinia amylovora ATCC 49946
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2024-11-25
Authors: Zhang, L.
PDB entry 9kqa: Cryo-EM structure of human VMAT2 in complex with Tetrabenazine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2024-11-25
Authors: Wei, F., Zhang, W., Zhang, Y.
PDB entry 9kqb: PSII-FCPII supercomplex from haptophyte Chrysotila roscoffensis
Classification: PHOTOSYNTHESIS
Source organism: Chrysotila roscoffensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2024-11-25
Authors: La Rocca, R., Kato, K., Tsai, P.-C., Nakajima, Y., Akita, F., Shen, J.-R.
PDB entry 9kqc: Chlorella virus Hyaluronan Synthase bound to VNAR
Classification: TRANSFERASE
Source organism: Chiloscyllium plagiosum; Chlorella virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-11-25
Authors: Deng, P., Zhang, X., Xu, M., Wen, J., Li, P., Bi, Y., Wang, H.
PDB entry 9kqd: YcfA-D19A-ATP-GTP complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Erwinia amylovora ATCC 49946
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-11-25
Authors: Zhang, L., Dou, C., Zheng, Y.H., Zhu, X.F., Cheng, W.
PDB entry 9kqe: Cryo-EM structure of human VMAT2 in complex with dopamine.
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-11-25
Authors: Wei, F., Zhang, W., Zhang, Y.
PDB entry 9kqf: Cryo-EM structure of PSS1 in the absence of calcium or L-serine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2024-11-25
Authors: Ning, Y., Yu, J., Ge, J.
PDB entry 9kqg: Cryo-EM structure of CsKCS6-CsCER2 complex
Classification: PLANT PROTEIN
Source organism: Citrus sinensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-11-25
Authors: Wang, Y., Guan, Z.Y., Zhu, F., Chen, Y.J., Yin, P.
PDB entry 9kqh: Crystal structure of Finegoldia magna DinG in complex with ssDNA and ADPNP
Classification: HYDROLASE/DNA
Source organism: Finegoldia magna ATCC 29328; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2024-11-25
Authors: Cheng, K., Gao, T.
PDB entry 9kqi: Cryo-EM structure of PSS1 with calcium and L-serine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-11-26
Authors: Ning, Y., Yu, J., Ge, J.
PDB entry 9kqj: Cryo-EM structure of PSS1 with calcium
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-11-26
Authors: Ning, Y., Yu, J., Ge, J.
PDB entry 9kqk: Crystal structure of HSA in complex with AmpHecy
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2024-11-26
Authors: Chen, X., Shi, M.W., Ge, Y.H., Fang, B., Li, L.
PDB entry 9kql: The crystal structure of MORC2_CC3 domain at 3.1 Angstroms resolution
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-11-26
Authors: Zhang, Y.S., Xu, W.Y., Huang, C.D., Wang, C.
PDB entry 9kqn: Hsp90-Cdc37-PINK1 complex
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-11-26
Authors: Tian, X.Y., Su, J.Y.
PDB entry 9kqo: cryo-EM structure of RNF20/RNF40-RAD6A-Ub in complex with H2BS112GlcNAc nucleosome
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2024-11-26
Authors: Deng, Z.H., Ai, H.S., Liu, L.
PDB entry 9kqp: PSI-LHCI supercomplex binding with 10 Lhcas from C. subellipsoidea
Classification: PHOTOSYNTHESIS
Source organism: Coccomyxa subellipsoidea C-169
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.92 Å
Deposited: 2024-11-26
Authors: Tsai, P.-C., Kato, K., Shen, J.-R., Akita, F.
PDB entry 9kqq: PSI-LHCI supercomplex binding with 8 Lhcas from C. subellipsoidea
Classification: PHOTOSYNTHESIS
Source organism: Coccomyxa subellipsoidea C-169
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2024-11-26
Authors: Tsai, P.-C., Kato, K., Shen, J.-R., Akita, F.
PDB entry 9kqr: Cryo-EM Structure of Mature Semliki Forest Virus
Classification: VIRAL PROTEIN
Source organism: Semliki Forest virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Deposited: 2024-11-26
Authors: Jia, X., Li, S., Zhang, Q., He, J.
PDB entry 9kqs: Crystal structure of WDR5 in complex with peptide MRTEPRPPAP of EMBOW
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-11-26
Authors: Zhang, M., Chen, M.-X., Min, J.-R.
PDB entry 9kqv: Cryo-EM structure of MPXV core protease in complex with aloxistatin(E64d)
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-11-27
Authors: Lan, W., You, T., Li, D., Dong, X., Wang, H., Xu, J., Wang, W., Gao, Y., Yang, H.
PDB entry 9kqw: eudesmanediol synthase complexed with Mg2+,PPi and BTAC(PeTS3 complex)
Classification: LYASE
Source organism: Penicillium expansum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-11-27
Authors: Huang, Z.Y., Li, W.L., Xu, J.H.
PDB entry 9kqy: The co-crystal structure of DYRK2 with TSL2109
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-11-27
Authors: Tong, C.
PDB entry 9kqz: Structural Basis for the Polymer-Protein Binding Mechanism of Polyvinyl Alcohol Esterase
Classification: HYDROLASE
Source organism: Comamonas sp. NyZ500
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2024-11-27
Authors: Wu, Y.F., Xu, X.X., Yin, C.F., Wang, L.T., Zhou, N.Y., Zhou, J.
PDB entry 9kr0: Structural Basis for the Polymer-Protein Binding Mechanism of Polyvinyl Alcohol Esterase
Classification: HYDROLASE
Source organism: Comamonas sp. NyZ500
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-11-27
Authors: Wu, Y.F., Xu, X.X., Yin, C.F., Wang, L.T., Zhou, N.Y., Zhou, J.
PDB entry 9kr1: Structural Basis for the Polymer-Protein Binding Mechanism of Polyvinyl Alcohol Esterase
Classification: HYDROLASE
Source organism: Comamonas sp. NyZ500
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2024-11-27
Authors: Wu, Y.F., Xu, X.X., Yin, C.F., Wang, L.T., Zhou, N.Y., Zhou, J.
PDB entry 9kr2: Structural Basis for the Polymer-Protein Binding Mechanism of Polyvinyl Alcohol Esterase
Classification: HYDROLASE
Source organism: Comamonas sp. NyZ500
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2024-11-27
Authors: Wu, Y.F., Xu, X.X., Yin, C.F., Wang, L.T., Zhou, N.Y., Zhou, J.
PDB entry 9kr3: Structural Basis for the Polymer-Protein Binding Mechanism of Polyvinyl Alcohol Esterase
Classification: HYDROLASE
Source organism: Comamonas sp. NyZ500
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-11-27
Authors: Wu, Y.F., Xu, X.X., Yin, C.F., Wang, L.T., Zhou, N.Y., Zhou, J.
PDB entry 9kr4: Enterovirus B 75
Classification: VIRAL PROTEIN
Source organism: Enterovirus B75
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2024-11-27
Authors: Tang, L., Cao, S., Chen, Q., Zhong, C., Wang, F., Liu, Z., Zhang, X., Ke, C.
PDB entry 9kr5: Crystal structure of SARS-CoV-2 main protease in complex with compound 3
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2024-11-27
Authors: Zhong, Y., Zhao, L., Zhang, W., Peng, W.
PDB entry 9kr6: Cryo-EM structure of MPXV core protease in complex with the substrate derivative I-G18
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-11-27
Authors: Lan, W., You, T., Li, D., Dong, X., Wang, H., Xu, J., Wang, W., Gao, Y., Yang, H.
PDB entry 9kr7: human creatine transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-11-27
Authors: Yu, J., Ge, J.P., Chen, J.H.
PDB entry 9kr8: Overall structure of HKU5 S protein in closed conformation
Classification: VIRAL PROTEIN
Source organism: Bat coronavirus HKU5
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2024-11-27
Authors: Zhang, Y.Y., Xia, L.Y., Zhou, Q.
PDB entry 9kr9: Overall structure of HKU5 S protein with S468A/Y463A mutation
Classification: VIRAL PROTEIN
Source organism: Bat coronavirus HKU5
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-11-27
Authors: Zhang, Y.Y., Xia, L.Y., Zhou, Q.
PDB entry 9kra: The RBD of HKU5 complex with Pipistrellus abramus ACE2
Classification: VIRAL PROTEIN
Source organism: Bat coronavirus HKU5; Pipistrellus abramus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-11-27
Authors: Zhang, Y.Y., Xia, L.Y., Zhou, Q.
PDB entry 9krb: The RBD of HKU5 complex with Pitta sordida ACE2
Classification: VIRAL PROTEIN
Source organism: Bat coronavirus HKU5; Pitta sordida
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2024-11-27
Authors: Zhang, Y.Y., Xia, L.Y., Zhou, Q.
PDB entry 9krc: CRYSTAL STRUCTURE OF OXIDIIZED CYTOCHROME C6 FROM SYNECHOCOCCUS ELONGATUS PCC 7942
Classification: ELECTRON TRANSPORT
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-11-27
Authors: Zhang, B.T., Liu, S.W., Xu, Y.C., Sheng, W., Gong, Y., Cao, P.
PDB entry 9krd: CRYSTAL STRUCTURE OF REDUCED CYTOCHROME C6 FROM SYNECHOCOCCUS ELONGATUS PCC 7942
Classification: ELECTRON TRANSPORT
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-11-27
Authors: Zhang, B.T., Liu, S.W., Xu, Y.C., Sheng, W., Gong, Y., Cao, P.
PDB entry 9kre: Alpha-hemolysin heptameric POPC bound pore state derived from egg PC/Cholesterol (3:1 molar ratio) liposomes
Classification: LIPID BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-11-27
Authors: Chatterjee, A., Roy, A., Dutta, S.
PDB entry 9krf: Alpha-hemolysin heptameric pore state bound to 10:0 PC lipid chains derived from 10:0 PC liposomes
Classification: LIPID BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-11-27
Authors: Chatterjee, A., Roy, A., Dutta, S.
PDB entry 9krg: Cryo-EM structure of human pannexin-3 heptamer
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-11-27
Authors: Tsuyama, T., Yokoyama, K.
PDB entry 9krh: human creatine transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-11-27
Authors: Yu, J., Ge, J.P., Chen, J.H.
PDB entry 9kri: human creatine transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2024-11-27
Authors: Yu, J., Ge, J.P., Chen, J.H.
PDB entry 9krj: Structure of mouse Dyrk1a
Classification: CYTOSOLIC PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-11-28
Authors: Kim, K.
PDB entry 9krk: Cryo-EM structure of human ABCC4 (Apo state)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-11-28
Authors: Li, M.H., Wen, X.P.
PDB entry 9krl: Cryo-EM structure of human ABCC4 (cAMP-bound)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2024-11-28
Authors: Li, M.H., Wen, X.P.
PDB entry 9krm: Cryo-EM structure of human ABCC4 (MTX-bound)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-11-28
Authors: Li, M.H., Wen, X.P.
PDB entry 9krn: Cryo-EM structure of human ABCC4 (PGE2-bound)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-11-28
Authors: Li, M.H., Wen, X.P.
PDB entry 9kro: Crystal structure of SHMT from E. faecium with mangiferin
Classification: TRANSFERASE
Source organism: Enterococcus faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-11-28
Authors: Murayama, K., Hayashi, H.
PDB entry 9krp: Structure of the HCV IRES-dependent 48S translation initiation complex with eIF5B and eIF3
Classification: RIBOSOME
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-11-28
Authors: Iwasaki, W., Kashiwagi, K., Sakamoto, A., Nishimoto, M., Takahashi, M., Machida, K., Imataka, H., Matsumoto, A., Shichino, Y., Iwasaki, S., Imami, K., Ito, T.
PDB entry 9krq: Crystal structure of ZXC21 RBD
Classification: VIRAL PROTEIN
Source organism: Bat coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2024-11-28
Authors: Lan, J., Wang, C.H.
PDB entry 9krr: CRYSTAL STRUCTURE OF REDUCED CYTOCHROME C6 FROM Synechocystis PCC 6803
Classification: ELECTRON TRANSPORT
Source organism: Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-11-28
Authors: Zhang, B.T., Liu, S.W., Xu, Y.C., Sheng, W., Gong, Y., Cao, P.
PDB entry 9krs: Crystal structure of Horse spleen L-ferritin mutant (Fr-E53F/E56F/E57F/R59A/E60F/E63F)
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2024-11-28
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.
PDB entry 9krt: E. coli MaeB holo form
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2024-11-28
Authors: Sassa, M., Yamato, H., Tanino, H., Fukuda, Y., Inoue, T.
PDB entry 9kru: B. bacteriovorus MaeB holo form
Classification: STRUCTURAL PROTEIN
Source organism: Bdellovibrio bacteriovorus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-11-28
Authors: Sassa, M., Yamato, H., Tanino, H., Fukuda, Y., Inoue, T.
PDB entry 9krv: B. bacteriovorus MaeB acetyl-CoA bound form
Classification: STRUCTURAL PROTEIN
Source organism: Bdellovibrio bacteriovorus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-11-28
Authors: Sassa, M., Yamato, H., Tanino, H., Fukuda, Y., Inoue, T.
PDB entry 9krw: E. coli MaeB apo form
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.85 Å
Deposited: 2024-11-28
Authors: Sassa, M., Yamato, H., Tanino, H., Fukuda, Y., Inoue, T.
PDB entry 9kry: Crystal structure Of MerTK kinase domain in complex With compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-11-29
Authors: Peng, Y.H., Lee, L.C., Hsueh, C.C., Wu, S.Y.
PDB entry 9krz: Crystal structure Of MerTK kinase domain in complex with compound 11
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-11-29
Authors: Peng, Y.H., Lee, L.C., Hsueh, C.C., Wu, S.Y.
PDB entry 9ks0: E. coli MaeB PTA domain apo form
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-11-29
Authors: Sassa, M., Yamato, H., Tanino, H., Fukuda, Y., Inoue, T.
PDB entry 9ks5: The crystal structure of ABL1 in complex with K-CNBA-1
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-11-29
Authors: Zhang, Z.M., Duan, L.P.
PDB entry 9ks6: The crystal structure of AURKA in complex with K-CNBA-1
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-11-29
Authors: Zhang, Z.M., Duan, L.P.
PDB entry 9ks7: Crystal structure of T. rubripes Mincle with glycerol
Classification: IMMUNE SYSTEM
Source organism: Takifugu rubripes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-11-29
Authors: Ito, T., Nagae, M., Yamasaki, S.
PDB entry 9ks9: Crystal structure of MerTK kinase domain in complex with compound 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-11-29
Authors: Peng, Y.H., Lee, L.C., Hsueh, C.C., Wu, S.Y.
PDB entry 9ksa: Serine Beta-Lactamase OXA-48 in Complex with MBL/SBL Inhibitor CB1
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.178 Å
Deposited: 2024-11-29
Authors: Li, G.-B., Wei, S.-Q.
PDB entry 9ksg: Crystal structure of RxLR145 effector
Classification: CYTOSOLIC PROTEIN
Source organism: Phytophthora capsici
Experimental method: X-RAY DIFFRACTION
Resolution: 2.577 Å
Deposited: 2024-11-29
Authors: Zhang, X.G.
PDB entry 9ksh: Crystal structure of SARS-CoV-2 main protease in complex with compound 1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2024-11-29
Authors: Zhong, Y., Zhao, L., Zhang, W., Peng, W.
PDB entry 9ksi: Crystal Structure of SARS-CoV-2 main protease in complex with compound 5
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-11-29
Authors: Zhong, Y., Zhao, L., Zhang, W., Peng, W.
PDB entry 9ksj: Crystal structure of SARS-CoV-2 main protease in complex with compound 8
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-11-29
Authors: Zhong, Y., Zhao, L., Zhang, W., Peng, W.
PDB entry 9ksk: Crystal structure of SARS-CoV-2 main protease in complex with compound 10
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-11-29
Authors: Zhong, Y., Zhao, L., Zhang, W., Peng, W.
PDB entry 9ksm: Complex structure of CaApiGT/UDP
Classification: PLANT PROTEIN
Source organism: Cicer arietinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9ksn: Crystal structure of meso-diaminopimelate dehydrogenase from Bacillus thermozeamaize mutant M9 complexed with NADP+
Classification: OXIDOREDUCTASE
Source organism: Bacillus thermozeamaize
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-11-30
Authors: Wei, Y., Geng, Q., Zheng, Y.-C., Zhang, Z.-J.
PDB entry 9kso: Complex structure of CaApiGT/UDP/Astragalin
Classification: PLANT PROTEIN
Source organism: Cicer arietinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9ksp: Cryo-EM structure of CtpA from Helicobacter pylori in an all-resting state
Classification: HYDROLASE
Source organism: Helicobacter pylori G27
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2024-11-30
Authors: Sun, K., Zhang, H., Au, S.W.N.
PDB entry 9ksq: Crystal Structure of the mouse Shank3 SAM domain
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2024-11-30
Authors: Zeyu, S., Mingjie, Z.
PDB entry 9ksr: Complex structure of CaApiGT/UDP/Quercetin 3-O-glucoside
Classification: PLANT PROTEIN
Source organism: Cicer arietinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9kss: Complex structure of CaApiGT/UDP/Quercetin 3-O-galactoside
Classification: PLANT PROTEIN
Source organism: Cicer arietinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9ksv: Complex structure of PcApiGT/UDP/Apigenin 7-O-glucoside
Classification: PLANT PROTEIN
Source organism: Petroselinum crispum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9ksw: Complex structure of CaApiGT/UMP/Rutin
Classification: PLANT PROTEIN
Source organism: Cicer arietinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9ksx: Complex structure of CaApiGT/UDP/Quercetin 3-O-xyloside
Classification: PLANT PROTEIN
Source organism: Cicer arietinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9ksy: Complex structure of CaApiGT/UDP/Guaijaverin
Classification: PLANT PROTEIN
Source organism: Cicer arietinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9ksz: Complex structure of PcApiGT/UDP
Classification: PLANT PROTEIN
Source organism: Petroselinum crispum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9kt0: Complex structure of PcApiGT/UDP/Genistein 7-O-glucoside
Classification: PLANT PROTEIN
Source organism: Petroselinum crispum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-11-30
Authors: Wang, H.T., Wang, Z.L., Ye, M.
PDB entry 9kt2: The crystal structure of BD1 in complex with BDS4
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46207 Å
Deposited: 2024-12-01
Authors: Zhang, Z.M., Wang, Y.Q.
PDB entry 9kt3: Structure of EG.5.1 S trimer with 2 down-RBDs complex with antibody CYFN1006-2.
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Escherichia phage T4; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2024-12-01
Authors: Wang, Y.J., Sun, L.
PDB entry 9kt5: Synchrotron X-ray crystal structure of oxygen-bound F87A/F393H P450BM3 with decoy C7ProPhe (N-enanthyl-L-prolyl-L-phenylalanine) and substrate styrene at 2 MGy X-ray dose
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-12-01
Authors: Nagao, S., Kuwano, W., Tosha, T., Yamashita, K., Stanfield, J.K., Kasai, C., Ariyasu, S., Shoji, O., Sugimoto, H., Kubo, M.
PDB entry 9kt6: HCA3-Gi complex with acifran
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2024-12-02
Authors: Wu, S., Wu, S.
PDB entry 9kt7: Cryo-EM structure of HCA2-Gi complex with MK6892
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-12-02
Authors: Wu, S., Wu, S.
PDB entry 9kt8: Cryo-EM structure of HCA2-Gi complex with acifran
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2024-12-02
Authors: Wu, S.
PDB entry 9kt9: Cryo-EM structure of HCA1-Gi complex with 3,5-DHBA
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-12-02
Authors: Wu, S.
PDB entry 9kta: Bacillus subtilis CpfC (HemH) Y13C variant
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2024-12-02
Authors: Shishido, M., Fujishiro, T.
PDB entry 9ktb: Bacillus subtilis CpfC (HemH) Y13C variant modified with bromobimane
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2024-12-02
Authors: Shishido, M., Fujishiro, T.
PDB entry 9ktc: Mn(II)-bound CpfC (HemH) Y13C variant modified with bromobimane
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-12-02
Authors: Shishido, M., Fujiishiro, T.
PDB entry 9ktd: Fe(II)-bound CpfC (HemH) Y13C variant modified with bromobimane
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2024-12-02
Authors: Shishido, M., Fujishiro, T.
PDB entry 9kte: Co(II)-bound CpfC (HemH) Y13C variant modified with bromobimane
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2024-12-02
Authors: Shishido, M., Fujishiro, T.
PDB entry 9ktf: Ni(II)-bound Bacillus subtilis CpfC (HemH) Y13C variant modified with bromobimane
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2024-12-02
Authors: Shishido, M., Fujishiro, T.
PDB entry 9ktg: Cu(II)-bound CpfC (HemH) Y13C variant modified with bromobimane
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2024-12-02
Authors: Shishido, M., Fujishiro, T.
PDB entry 9kth: Zn(II)-bound CpfC (HemH) Y13C variant modified with bromobimane
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-12-02
Authors: Shishido, M., Fujishiro, T.
PDB entry 9kti: CryoEM structure of a 2,3-hydroxycinnamic acid 1,2-dioxygenase MhpB in substrate bound form
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-12-02
Authors: Dong, X., Jiang, W.X., Ma, L.X., Xing, Q.
PDB entry 9ktj: Solution NMR structures of ATP-binding DNA aptamer in complex with ATP
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-12-02
Authors: Jiang, Y., Wan, L., Guo, P.
PDB entry 9ktk: Crystal structure of human SIRT3 with its activator SKLB-11A
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2024-12-02
Authors: Ouyang, L., Wu, C.Y.
PDB entry 9ktl: Cryo-EM structure of reduced form of formate dehydrogenase from Rhodobacter aestuarii (RaFDH) with NADH
Classification: OXIDOREDUCTASE
Source organism: Rhodobacter aestuarii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2024-12-02
Authors: Zhang, K., Zhang, L.
PDB entry 9ktm: Alpha-hemolysin heptameric pre-pore state bound to 10:PC lipid chains derived from 10:0 PC liposomes.
Classification: LIPID BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-02
Authors: Chatterjee, A., Roy, A., Dutta, S.
PDB entry 9kto: Alpha-hemolysin heptameric late pre-pore state with bound lipids derived from 10:0 PC/Sphingomyelin liposomes
Classification: LIPID BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-12-02
Authors: Chatterjee, A., Roy, A., Dutta, S.
PDB entry 9ktq: Crystal structure of the pathogen-secreted apoplastic GH12 xyloglucan-specific endoglucanase XEG1
Classification: HYDROLASE
Source organism: Phytophthora sojae (strain P6497)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-12-02
Authors: Xia, Y.Q., Liu, L., Zhang, Q., Shi, X.C., Wang, Z.K., Zhang, Z.C., He, X.Y., Xiao, J.H., Jiang, H.B., Zhang, S.C., Yang, Y.H., Ye, W.W., Wang, Z.Y., Wang, Y., Ma, Z.C., Yang, Q., Wang, Y.C.
PDB entry 9ktr: Cryo-EM structure of formate dehydrogenase from Rhodobacter aestuarii (RaFDH) with NAD+
Classification: OXIDOREDUCTASE
Source organism: Rhodobacter aestuarii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-12-02
Authors: Zhang, K., Zhang, L.
PDB entry 9kts: Structure of TauT in the apo state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-02
Authors: Yin, Y.X., Lu, Y.S., Ding, D.
PDB entry 9ktt: Structure of TauT in complex with taurine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-02
Authors: Yin, Y.X., Lu, Y.S., Ding, D.
PDB entry 9ktu: Structure of TauT in complex with beta-alanine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-03
Authors: Yin, Y.X., Lu, Y.S., Ding, D.
PDB entry 9ktv: Structure of TauT in complex with GABA
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-03
Authors: Yin, Y.X., Lu, Y.S., Ding, D.
PDB entry 9ktw: Cryo-EM structure of wild type RIG-I with 5'p-RNA
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-12-03
Authors: Tan, Y.B., Luo, D.
PDB entry 9ktx: Structure of TauT in complex with Guanidinoethyl sulfonate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-03
Authors: Yin, Y.X., Lu, Y.S., Ding, D.
PDB entry 9kty: Cryo-EM structure of the TIA-1 prion-like domain amyloid fibril, WT
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-12-03
Authors: Inaoka, D., Miyata, T., Makino, F., Ohtani, Y., Ekari, M., Kobayashi, R., Imamura, K., Sakamoto, E., Kodama, S.T., Yoshida, N., Kato, T., Namba, K., Tochio, H., Sekiyama, N.
PDB entry 9ktz: Cryo-EM structure of the TIA-1 prion-like domain amyloid fibril, G355R
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-03
Authors: Inaoka, D., Miyata, T., Makino, F., Ohtani, Y., Ekari, M., Kobayashi, R., Imamura, K., Sakamoto, E., Kodama, S.T., Yoshida, N., Kato, T., Namba, K., Tochio, H., Sekiyama, N.
PDB entry 9ku0: Crystal structure of CtpA F105R mutant from Helicobacter pylori
Classification: HYDROLASE
Source organism: Helicobacter pylori G27
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2024-12-03
Authors: Sun, K., Au, S.W.N.
PDB entry 9ku2: Structure of taterapox core protease central domain
Classification: VIRAL PROTEIN
Source organism: Taterapox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.895 Å
Deposited: 2024-12-03
Authors: Li, D., Wang, H., Ji, X., Gao, Y., Wang, W., Yang, H.
PDB entry 9ku3: Cryo-EM structure of CtpA S300A/K325A/Q329A mutant from Helicobacter pylori
Classification: HYDROLASE
Source organism: Escherichia coli BL21(DE3); Helicobacter pylori G27
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-12-03
Authors: Sun, K., Zhang, H., Au, S.W.N.
PDB entry 9ku4: Cryo-EM structure of E373A mutant RIG-I with 5'p-RNA
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-12-03
Authors: Tan, Y.B., Luo, D.
PDB entry 9ku5: Crystal structure of substrate bound GH5_22 exo-beta-xylosidase from the seaweed-derived thermophile Geobacillus thermodenitrificans OS27
Classification: HYDROLASE
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2024-12-03
Authors: Hino, T., Lee, W., Okamoto, T., Ohshiro, T., Nagano, S., Suzuki, H.
PDB entry 9ku6: Crystal structure of the complex of lactoperoxidase with nitric oxide at 1.72 A resolution
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-12-03
Authors: Maurya, A., Sharma, P., Sharma, S., Singh, T.P.
PDB entry 9ku9: Structure of mpox core protease mutant
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2024-12-03
Authors: Dong, X., Wang, H., Ji, X., Gao, Y., Wang, W., Yang, H.
PDB entry 9kua: Crystal structure of GH5_22 exo-beta-xylosidase from the seaweed-derived thermophile Geobacillus thermodenitrificans OS27
Classification: HYDROLASE
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-12-03
Authors: Hino, T., Lee, W., Okamoto, T., Ohshiro, T., Nagano, S., Suzuki, H.
PDB entry 9kub: Cryo-EM structure of CtpA from Helicobacter pylori in conformation I
Classification: HYDROLASE
Source organism: Helicobacter pylori G27
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2024-12-03
Authors: Sun, K., Zhang, H., Au, S.W.N.
PDB entry 9kuc: Cryo-EM structure of CtpA from Helicobacter pylori in conformation II
Classification: HYDROLASE
Source organism: Helicobacter pylori G27
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2024-12-03
Authors: Sun, K., Zhang, H., Au, S.W.N.
PDB entry 9kud: Crystal structure of SARS-CoV-2 JN.1 variant RBD complexed with squirrel ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Petaurus norfolcensis; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2024-12-03
Authors: Lan, J., Wang, C.H.
PDB entry 9kue: Crystal structure of the soluble green pigment protein from Tettigonia cantans
Classification: TRANSPORT PROTEIN
Source organism: Tettigonia cantans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-12-03
Authors: Sluchanko, N.N., Egorkin, N.A., Varfolomeeva, L.A., Popov, V.O., Boyko, K.M.
PDB entry 9kuf: Cryo-EM structure of HsClpP bound to CLPP-2068
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-12-03
Authors: Zhao, H., Yuan, Q., Yin, W.
PDB entry 9kug: Structure of EP67 bound to human C5aR1 in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2024-12-03
Authors: Banerjee, R., Ganguly, M., Yadav, M.K., Mishra, S., Dalal, A., Shukla, A.K.
PDB entry 9kuh: Co-crystal structure of wild-type OYE2 with 2-(prop-1-en-2-yl)pyridine
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 3.43 Å
Deposited: 2024-12-03
Authors: Wu, D.S., Yang, J.
PDB entry 9kui: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation F142L
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2024-12-04
Authors: Chen, L.
PDB entry 9kuj: Structure of quinone oxidoreductase from Rouxiella badensis
Classification: OXIDOREDUCTASE
Source organism: Rouxiella badensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2024-12-04
Authors: Gao, D.K.
PDB entry 9kuk: Bovine Heart Cytochrome c Oxidase in the Xenon-bound Fully Oxidized State under Aerobic Condition
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-04
Authors: Muramoto, K., Shinzawa-Itoh, K.
PDB entry 9kul: Bovine Heart Cytochrome c Oxidase in the Xenon-bound Fully Oxidized State under Anaerobic Condition
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-04
Authors: Muramoto, K., Shinzawa-Itoh, K.
PDB entry 9kum: Bovine Heart Cytochrome c Oxidase in the Xenon-bound Fully Reduced State
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-04
Authors: Muramoto, K., Shinzawa-Itoh, K.
PDB entry 9kun: Crystal structure of ligand-free trypanosome alternative oxidase
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-12-04
Authors: Ebiloma, G.U., Balogun, E.O., Dardonville, C., Shiba, T., De Koning, H.P.
PDB entry 9kuo: Crystal Structure of the Kv7.1 C-terminal Domain in Complex with Calmodulin disease mutation Q136P
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.13 Å
Deposited: 2024-12-04
Authors: Liu, C.
PDB entry 9kup: Crystal structure of MCP2201LBD
Classification: HYDROLASE
Source organism: Comamonas thiooxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-12-04
Authors: Cui, R., Li, D.F.
PDB entry 9kuq: Crystal structure of a C45 isoprenyl diphosphate synthase, Rv0562 from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-12-04
Authors: Wang, Q., Yang, Y., Chen, C.-C., Guo, R.-T.
PDB entry 9kur: Crystal structure of mAb nCoV400Fab with SARS-CoV-2 N-CTD Complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-12-04
Authors: Xue, S.J., Chen, S.D.
PDB entry 9kus: Cryo-EM structure of C-Methyltransferase from Rhododendron dauricum
Classification: TRANSFERASE
Source organism: Rhododendron dauricum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2024-12-04
Authors: Ye, Y.M., Dai, Z.D., Zhang, M.Z.