LiteFold/PDB huggingface dataset:
PDB entry 4gek: Crystal Structure of wild-type CmoA from E.coli
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-08-02
Authors: Kim, J., Toro, R., Bonanno, J.B., Bhosle, R., Sampathkumar, P., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4gel: Crystal structure of Zucchini
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.756 Å
Deposited: 2012-08-02
Authors: Nishimasu, H., Fukuhara, S., Ishitani, R., Nureki, O.
PDB entry 4gem: Crystal structure of Zucchini (K171A)
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.206 Å
Deposited: 2012-08-02
Authors: Nishimasu, H., Fukuhara, S., Ishitani, R., Nureki, O.
PDB entry 4gen: Crystal structure of Zucchini (monomer)
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-08-02
Authors: Nishimasu, H., Fukuhara, S., Ishitani, R., Nureki, O.
PDB entry 4geo: P38a MAP kinase DEF-pocket penta mutant (M194A, L195A, H228A, I229A, Y258A)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2012-08-02
Authors: Livnah, O., Tzarum, N.
PDB entry 4gep: SULFITE REDUCTASE HEMOPROTEIN CYANIDE COMPLEX REDUCED WITH CRII EDTA
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 1997-07-10
Authors: Crane, B.R., Getzoff, E.D.
PDB entry 4geq: Crystal structure of the Spc24-Spc25/Cnn1 binding interface
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae S288c; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2012-08-02
Authors: Malvezzi, F., Litos, G., Schleiffer, A., Heuck, A., Clausen, T., Westermann, S.
PDB entry 4ger: Crystal structure of Gentlyase, the neutral metalloprotease of Paenibacillus polymyxa
Classification: HYDROLASE
Source organism: Paenibacillus polymyxa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2012-08-02
Authors: Ruf, A., Stihle, M., Benz, J., Schmidt, M., Sobek, H.
PDB entry 4ges: crystal structure of GFP-TYR151PYZ with an unnatural amino acid incorporation
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2012-08-02
Authors: Dong, J., Liu, X., Li, J., Wang, J., Gong, W.
PDB entry 4get: Crystal structure of biogenic amine binding protein from Rhodnius prolixus
Classification: Amine-binding protein
Source organism: Rhodnius prolixus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2012-08-02
Authors: Andersen, J.F., Chang, B.W., Xu, X., Mans, B.J., Ribeiro, J.M.
PDB entry 4geu: Structure of a stabilised ceSAS-6 dimer
Classification: STRUCTURAL PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2012-08-02
Authors: Erat, M.C., Vakonakis, I.
PDB entry 4gev: E. coli thymidylate synthase Y209W variant in complex with substrate and a cofactor analog
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2012-08-02
Authors: Newby, Z., Lee, T.T., Finer-Moore, J., Stroud, R.M.
PDB entry 4gew: Crystal structure of TDP2 from C. elegans
Classification: HYDROLASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-08-02
Authors: Shi, K., Kurahashi, K., Aihara, H.
PDB entry 4gex: Structure of a stabilised ceSAS-6 dimer, second crystal form
Classification: STRUCTURAL PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-08-02
Authors: Erat, M.C., Vakonakis, I.
PDB entry 4gey: High pH structure of Pseudomonas putida OprB
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-08-02
Authors: van den Berg, B.
PDB entry 4gez: Structure of a neuraminidase-like protein from A/bat/Guatemala/164/2009
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-08-02
Authors: Yang, H., Carney, P.J., Donis, R.O., Stevens, J.
PDB entry 4gf0: Crystal structure of glutahtione transferase homolog from sulfitobacter, TARGET EFI-501084, with bound glutathione
Classification: TRANSFERASE
Source organism: Sulfitobacter
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-08-02
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Armstrong, R.N., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4gf1: Crystal Structure of Certhrax
Classification: TRANSFERASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-08-02
Authors: Hong, B.S., Dimov, S., Tempel, W., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Park, H., Structural Genomics Consortium (SGC)
PDB entry 4gf2: Crystal structure of Plasmodium falciparum Erythrocyte Binding Antigen 140 (PfEBA-140/BAEBL)
Classification: CELL ADHESION, CELL INVASION
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-08-02
Authors: Lin, D.H., Malpede, B.M., Batchelor, J.D., Tolia, N.H.
PDB entry 4gf3: Structure of a SycH-YopH Chaperone-Effector Complex
Classification: Chaperone/Chaperone Effector
Source organism: Yersinia enterocolitica; Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-08-02
Authors: Stebbins, C.E., Vujanac, M.
PDB entry 4gf4: Low pH structure of Pseudomonas putida OprB
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2012-08-02
Authors: van den Berg, B.
PDB entry 4gf5: Crystal Structure of Calicheamicin Methyltransferase, CalS11
Classification: TRANSFERASE
Source organism: Micromonospora echinospora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-08-02
Authors: Helmich, K.E., Singh, S., Thorson, J.S., Phillips Jr., G.N., Enzyme Discovery for Natural Product Biosynthesis (NatPro), Center for Eukaryotic Structural Genomics (CESG)
PDB entry 4gf6: crystal structure of GFP with cuprum bound at the Incorporated metal Chelating Amino Acid PYZ151
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2012-08-03
Authors: Dong, J., Liu, X., Li, J., Wang, J., Gong, W.
PDB entry 4gf7: Crystal structure of 2-Methyl-3-hydroxypyridine-5-carboxylic acid oxygenase (MHPCO), unliganded form
Classification: OXIDOREDUCTASE
Source organism: Mesorhizobium loti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.581 Å
Deposited: 2012-08-03
Authors: Kobayashi, J., Yoshida, H., Mikami, B., Hayashi, H., Kamitori, S., Sawa, Y., Yagi, T.
PDB entry 4gf8: Crystal Structure of the Chitin Oligasaccharide Binding Protein
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-08-03
Authors: Xu, S., Li, X., Gu, L., Roseman, R., Stock, A.M.
PDB entry 4gf9: Structural insights into the dual strategy of recognition of peptidoglycan recognition protein, PGRP-S: ternary complex of PGRP-S with LPS and fatty acid
Classification: ANTIBIOTIC, Antimicrobial Protein
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-08-03
Authors: Sharma, P., Dube, D., Sinha, M., Yadav, S., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4gfa: N-terminal coiled-coil dimer of C.elegans SAS-6, crystal form A
Classification: STRUCTURAL PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2012-08-03
Authors: Erat, M.C., Vakonakis, I.
PDB entry 4gfb: Rap1/DNA complex
Classification: Transcription/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2012-08-03
Authors: Le Bihan, Y.-V., Matot, B., Le Du, M.-H.
PDB entry 4gfc: N-terminal coiled-coil dimer of C.elegans SAS-6, crystal form B
Classification: STRUCTURAL PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2012-08-03
Authors: Erat, M.C., Vakonakis, I.
PDB entry 4gfd: Thymidylate kinase (TMK) from S. Aureus in complex with TK-666
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-08-03
Authors: Olivier, N.B., Martinez-Botella, G., Keating, T.
PDB entry 4gfg: Crystal structure of spleen tyrosine kinase complexed with r9021
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-08-03
Authors: Lukacs, C., Slade, M.
PDB entry 4gfh: Topoisomerase II-DNA-AMPPNP complex
Classification: Isomerase/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.408 Å
Deposited: 2012-08-03
Authors: Schmidt, B.H., Osheroff, N., Berger, J.M.
PDB entry 4gfi: Crystal structure of EFI-502318, an enolase family member from Agrobacterium tumefaciens with homology to dipeptide epimerases (bound sodium, L-Ala-L-Glu with ordered loop)
Classification: ISOMERASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-08-03
Authors: Vetting, M.W., Bouvier, J.T., Morisco, L.L., Wasserman, S.R., Sojitra, S., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4gfj: Crystal structure of Topo-78, an N-terminal 78kDa fragment of topoisomerase V
Classification: ISOMERASE
Source organism: Methanopyrus kandleri AV19
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2012-08-03
Authors: Rajan, R., Prasad, R., Taneja, B., Wilson, S.H., Mondragon, A.
PDB entry 4gfk: structures of NO factors
Classification: DNA BINDING PROTEIN
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-08-03
Authors: Schumacher, M.A.
PDB entry 4gfl: NO mechanism, slma
Classification: DNA BINDING PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-08-03
Authors: Schumacher, M.A.
PDB entry 4gfm: JAK2 kinase (JH1 domain) with 2,6-DICHLORO-N-(2-OXO-2,5-DIHYDROPYRIDIN-4-YL)BENZAMIDE
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-08-03
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 4gfn: Pyrrolopyrimidine inhibitors of dna gyrase b and topoisomerase iv, part i: structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic
Classification: Isomerase/Isomerase inhibitor
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-08-03
Authors: Bensen, D.C., Trzoss, M., Tari, L.W.
PDB entry 4gfo: TYK2 kinase (JH1 domain) with 2,6-DICHLORO-N-(2-OXO-2,5-DIHYDROPYRIDIN-4-YL)BENZAMIDE
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-08-03
Authors: Eigenbrot, C., Ultsch, M.
PDB entry 4gfp: 2.7 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (AroA) from Coxiella burnetii in a second conformational state
Classification: TRANSFERASE
Source organism: Coxiella burnetii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-08-03
Authors: Light, S.H., Minasov, G., Krishna, S.N., Shuvalova, L., Papazisi, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4gfq: 2.65 Angstrom Resolution Crystal Structure of Ribosome Recycling Factor (frr) from Bacillus anthracis
Classification: TRANSLATION
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2012-08-03
Authors: Minasov, G., Halavaty, A., Shuvalova, L., Dubrovska, I., Winsor, J., Papazisi, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4gfr: Crystal Structure of the liganded Chitin Oligasaccharide Binding Protein
Classification: SIGNALING PROTEIN
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-08-03
Authors: Xu, S., Li, X., Gu, L., Roseman, R., Stock, A.M.
PDB entry 4gfs: 1.8 Angstrom Crystal Structure of the 3-Dehydroquinate Dehydratase (aroD) from Salmonella typhimurium LT2 with Nickel Bound at Active Site
Classification: LYASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-08-03
Authors: Light, S.H., Minasov, G., Krishna, S.N., Shuvalova, L., Kwon, K., Lavie, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4gft: Malaria invasion machinery protein-Nanobody complex
Classification: protein binding, immune system
Source organism: LAMA GLAMA; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-08-03
Authors: Khamrui, S., Turley, S., Pardon, E., Steyaert, J., Verlinde, C., Fan, E., Bergman, L.W., Hol, W.G.J.
PDB entry 4gfu: PTPN18 in complex with HER2-pY1248 phosphor-peptides
Classification: HYDROLASE/Peptide
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-08-04
Authors: Wang, H.M., Yang, F., Du, Y.J., Yang, D.X., Zhang, Y., Yu, X., Sun, J.P.
PDB entry 4gfv: PTPN18 in complex with HER2-pY1196 phosphor-peptides
Classification: HYDROLASE/Peptide
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.095 Å
Deposited: 2012-08-04
Authors: Wang, H.M., Yang, F., Du, Y.J., Yang, D.X., Zhang, Y., Yu, X., Sun, J.P.
PDB entry 4gfx: Crystal structure of the N-terminal domain of TXNIP
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-08-04
Authors: Hwang, J., Kim, M.H.
PDB entry 4gfy: Design of peptide inhibitors of phospholipase A2: crystal Structure of phospholipase A2 complexed with a designed tetrapeptide Val - Ilu- Ala - Lys at 2.7 A resolution
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Daboia russellii pulchella; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-08-04
Authors: Shukla, P.K., Sinha, M., Dey, S., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4gg1: Crystal Structure of Benzoylformate Decarboxylase Mutant L403T
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.069 Å
Deposited: 2012-08-04
Authors: Novak, W.R.P., Andrews, F.H., Tom, A.R., Gunderman, P.R., McLeish, M.J.
PDB entry 4gg2: The crystal structure of glutamate-bound human gamma-glutamyltranspeptidase 1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2012-08-04
Authors: West, M.B., Chen, Y., Wickham, S., Heroux, A., Cahill, K., Hanigan, M.H., Mooers, B.H.M.
PDB entry 4gg4: Crystal structure of the TAL effector dHax3 bound to specific DNA-RNA hybrid
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Xanthomonas campestris pv. armoraciae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2012-08-05
Authors: Yin, P., Deng, D., Yan, C.Y., Pan, X.J., Yan, N., Shi, Y.G.
PDB entry 4gg5: Crystal structure of CMET in complex with novel inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.423 Å
Deposited: 2012-08-05
Authors: Liu, Q.F., Chen, T.T., Xu, Y.C.
PDB entry 4gg6: Protein complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2012-08-06
Authors: Broughton, S.E., Theodossis, A., Petersen, J., Reid, H.H., Rossjohn, J.
PDB entry 4gg7: Crystal structure of cMET in complex with novel inhibitor
Classification: Transferase/Transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2012-08-06
Authors: Liu, Q.F., Chen, T.T., Xu, Y.C.
PDB entry 4gg8: Immune Receptor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2012-08-06
Authors: Broughton, S.E., Theodossis, A., Petersen, J., Reid, H.H., Rossjohn, J.
PDB entry 4gg9: tRNA Guanine Transglycosylase in complex with thiophene-substituted lin-benzohypoxanthine inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Zymomonas mobilis subsp. mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2012-08-06
Authors: Immekus, F., Klebe, G.
PDB entry 4gga: Structural Analysis of Human Cdc20 Supports Multi-site Degron Recognition by APC/C
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.044 Å
Deposited: 2012-08-06
Authors: Luo, X., Tian, W., Tomchick, D.R.
PDB entry 4ggb: Crystal structure of a proposed galactarolactone cycloisomerase from agrobacterium tumefaciens, TARGET EFI-500704, WITH BOUND CA, DISORDERED LOOPS
Classification: ISOMERASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-08-06
Authors: Vetting, M.W., Bouvier, J.T., Morisco, L.L., Wasserman, S.R., Sojitra, S., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4ggc: Structural Analysis of Human Cdc20 Supports Multi-site Degron Recognition by APC/C
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2012-08-06
Authors: Luo, X., Tian, W., Tomchick, D.R.
PDB entry 4ggd: Structural analysis of human Cdc20 supports multisite degron recognition by APC/C.
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.435 Å
Deposited: 2012-08-06
Authors: Luo, X., Tian, W., Tomchick, D.R.
PDB entry 4ggf: Crystal structure of Mn2+ bound calprotectin
Classification: ANTIMICROBIAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-08-06
Authors: Damo, S.M., Fritz, G.
PDB entry 4ggg: Crystal structure of V66A/L68V CzrA in the Zn(II)bound state.
Classification: TRANSCRIPTION regulator
Source organism: Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.998 Å
Deposited: 2012-08-06
Authors: Campanello, G.C., Ma, Z., Grossoehme, N.E., Chakrovorty, D.K., Guerra, A.J., Ye, Y., Dann III, C.E., Merz Jr., K.M., Giedroc, D.P.
PDB entry 4ggh: Crystal structure of an enolase family member from vibrio harveyi (efi-target 501692) with homology to mannonate dehydratase, with mg, hepes, and ethylene glycol bound (ordered loops, space group c2221)
Classification: HYDROLASE
Source organism: Vibrio harveyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-08-06
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4ggj: Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD)
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-08-06
Authors: Ipsaro, J.J., Haase, A.D., Hannon, G.J., Joshua-Tor, L.
PDB entry 4ggk: Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD) bound to tungstate
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-08-06
Authors: Ipsaro, J.J., Haase, A.D., Hannon, G.J., Joshua-Tor, L.
PDB entry 4ggl: Pyrrolopyrimidine inhibitors of dna gyrase b and topoisomerase iv, part i: structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity
Classification: Isomerase/Isomerase inhibitor
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2012-08-06
Authors: Bensen, D.C., Creighton, C.J., Tari, L.W.
PDB entry 4ggm: Structure of LpxI
Classification: HYDROLASE
Source organism: Caulobacter crescentus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.897 Å
Deposited: 2012-08-06
Authors: Metzger IV, L.E., Lee, J.K., Finer-Moore, J.S., Raetz, C.R.H., Stroud, R.M., Center for Structures of Membrane Proteins (CSMP)
PDB entry 4ggn: Malaria invasion machinery protein complex
Classification: PROTEIN BINDING
Source organism: Plasmodium knowlesi; Plasmodium yoelii yoelii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2012-08-06
Authors: Khamrui, S., Turley, S., Bergman, L.W., Hol, W.G.J.
PDB entry 4ggo: Crystal Structure of Trans-2-Enoyl-CoA Reductase from Treponema denticola
Classification: OXIDOREDUCTASE
Source organism: Treponema denticola ATCC 35405
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-08-06
Authors: Bond-Watts, B.B., Weeks, A.M., Chang, M.C.Y.
PDB entry 4ggp: Crystal Structure of Selenomethionine containing Trans-2-Enoyl-CoA Reductase from Treponema denticola
Classification: OXIDOREDUCTASE
Source organism: Treponema denticola
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2012-08-06
Authors: Bond-Watts, B.B., Weeks, A.M., Chang, M.C.Y.
PDB entry 4ggq: Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with CJ40
Classification: Isomerase, protein binding
Source organism: Burkholderia pseudomallei; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-08-07
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4ggr: The structure of apo bradavidin2 (Form A)
Classification: BIOTIN BINDING PROTEIN
Source organism: Bradyrhizobium japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-08-07
Authors: Livnah, O., Meir, A.
PDB entry 4ggt: Structure of apo Bradavidin2 (Form B)
Classification: BIOTIN BINDING PROTEIN
Source organism: Bradyrhizobium japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.693 Å
Deposited: 2012-08-07
Authors: Livnah, O., Meir, A.
PDB entry 4ggv: Crystal Structure of HmtT Involved in Himastatin Biosynthesis
Classification: OXIDOREDUCTASE
Source organism: Streptomyces himastatinicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.331 Å
Deposited: 2012-08-07
Authors: Zhang, H., Chen, J., Wang, H., Zhang, H.
PDB entry 4ggz: The structure of bradavidin2-biotin complex
Classification: BIOTIN BINDING PROTEIN
Source organism: Bradyrhizobium japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-08-07
Authors: Livnah, O., Meir, A.
PDB entry 4gh0: Crystal structure of D48V mutant of human GLTP bound with 12:0 monosulfatide
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2012-08-07
Authors: Samygina, V.R., Cabo-Bilbao, A., Ochoa-Lizarralde, B., Popov, A.N., Malinina, L.
PDB entry 4gh1: tRNA Guanine Transglycosylase in complex with morpholine substituted lin-benzohypoxanthine inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Zymomonas mobilis subsp. mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2012-08-07
Authors: Immekus, F., Klebe, G.
PDB entry 4gh2: Crystal Structure of the CHK1
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2012-08-07
Authors: Kang, Y.N., Stuckey, J.A., Chang, P., Russell, A.J.
PDB entry 4gh3: tRNA Guanine Transglycosylase in complex with phenethyl substituted lin-benzohypoxanthine inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Zymomonas mobilis subsp. mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2012-08-07
Authors: Immekus, F., Klebe, G.
PDB entry 4gh4: Crystal Structure of Foot and Mouth Disease Virus A22 Serotype
Classification: VIRUS
Source organism: Foot-and-mouth disease virus - type A
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-08-07
Authors: Kotecha, A., Jinshan, R., Curry, S., Fry, E., Stuart, D.
PDB entry 4gh5: Crystal structure of S-2-hydroxypropyl coenzyme M dehydrogenase (S-HPCDH)
Classification: OXIDOREDUCTASE
Source organism: Xanthobacter autotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-08-07
Authors: Bakelar, J.W., Johnson, S.J.
PDB entry 4gh6: Crystal structure of the PDE9A catalytic domain in complex with inhibitor 28
Classification: HYDROLASE/Hydrolase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-08-07
Authors: Hou, J., Ke, H.
PDB entry 4gh7: Crystal structure of Anticalin N7A in complex with oncofetal fibronectin fragment Fn7B8
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-08-07
Authors: Schiefner, A., Gebauer, M., Skerra, A.
PDB entry 4gh8: Crystal structure of a 'humanized' E. coli dihydrofolate reductase
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-08-07
Authors: French, J.B., Liu, C.T., Hanoian, P., Pringle, T.H., Hammes-Schiffer, S., Benkovic, S.J.
PDB entry 4gh9: Crystal structure of Marburg virus VP35 RNA binding domain
Classification: VIRAL PROTEIN,RNA BINDING PROTEIN
Source organism: Marburg virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2012-08-07
Authors: Bale, S., Jean-Philippe, J., Bornholdt, Z.A., Kimberlin, C.K., Halfmann, P., Zandonatti, M.A., Kunert, J., Kroon, G.J.A., Kawaoka, Y., MacRae, I.J., Wilson, I.A., Saphire, E.O.
PDB entry 4gha: Crystal structure of Marburg virus VP35 RNA binding domain bound to 12-bp dsRNA
Classification: VIRAL PROTEIN,RNA BINDING PROTEIN/RNA
Source organism: Marburg virus - Musoke, Kenya, 1980; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-08-07
Authors: Bale, S., Jean-Philippe, J., Bornholdt, Z.A., Kimberlin, C.K., Halfmann, P., Zandonatti, M.A., Kunert, J., Kroon, G.J.A., Kawaoka, Y., MacRae, I.J., Wilson, I.A., Saphire, E.O.
PDB entry 4ghb: Crystal structure of a porin-like protein (BACUNI_01323) from Bacteroides uniformis ATCC 8492 at 2.32 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2012-08-07
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4ghc: Structure of Y257F variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum at 1.55 Ang resolution
Classification: OXIDOREDUCTASE
Source organism: Brevibacterium fuscum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2012-08-07
Authors: Kovaleva, E.G., Lipscomb, J.D.
PDB entry 4ghd: Structure of Y257F variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with HPCA at 1.85 Ang resolution
Classification: OXIDOREDUCTASE
Source organism: Brevibacterium fuscum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-08-07
Authors: Kovaleva, E.G., Lipscomb, J.D.
PDB entry 4ghe: Structure of Y257F variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-nitrocatechol at 1.60 Ang resolution
Classification: OXIDOREDUCTASE
Source organism: Brevibacterium fuscum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-08-07
Authors: Kovaleva, E.G., Lipscomb, J.D.
PDB entry 4ghf: Structure of Y257F variant of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-Nitrocatechol and dioxygen at 1.67 Ang resolution
Classification: OXIDOREDUCTASE
Source organism: Brevibacterium fuscum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2012-08-07
Authors: Kovaleva, E.G., Lipscomb, J.D.
PDB entry 4ghg: Structure of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with HPCA at 1.50 Ang resolution
Classification: OXIDOREDUCTASE
Source organism: Brevibacterium fuscum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-08-07
Authors: Kovaleva, E.G., Lipscomb, J.D.
PDB entry 4ghh: Structure of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-Nitrocatechol at 1.55 Ang resolution
Classification: OXIDOREDUCTASE
Source organism: Brevibacterium fuscum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2012-08-07
Authors: Kovaleva, E.G., Lipscomb, J.D.
PDB entry 4ghi: Crystal structure of the high affinity heterodimer of HIF2 alpha and ARNT C-terminal PAS domains in complex with a benzoxadiazole antagonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-08-07
Authors: Scheuermann, T.H., Key, J., Tambar, U.K., Bruick, R.K., Gardner, K.H.
PDB entry 4ghj: 1.75 Angstrom Crystal Structure of Transcriptional Regulator ftom Vibrio vulnificus.
Classification: TRANSCRIPTION
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-08-07
Authors: Minasov, G., Shuvalova, L., Dubrovska, I., Winsor, J., Grimshaw, S., Papazisi, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4ghk: X-ray Crystal Structure of Gamma-glutamyl phosphate reductase from Burkholderia thailandensis
Classification: OXIDOREDUCTASE
Source organism: Burkholderia thailandensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-08-07
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4ghl: Structural Basis for Marburg virus VP35 mediate immune evasion mechanisms
Classification: TRANSCRIPTION, viral protein/RNA
Source organism: Lake Victoria marburgvirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2012-08-07
Authors: Ramanan, P., Borek, D.M., Otwinowski, Z., Leung, D.W., Amarasinghe, G.K.
PDB entry 4ghm: Crystal Structure of the H233A mutant of 7-cyano-7-deazaguanine reductase, QueF from Vibrio cholerae complexed with preQ0
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae O1 biovar El Tor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.618 Å
Deposited: 2012-08-08
Authors: Kim, Y., Zhou, M., Gu, M., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4ghn: Crystal structure of a putative protease (BACUNI_00178) from Bacteroides uniformis ATCC 8492 at 1.50 A resolution
Classification: HYDROLASE
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-08-08
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4gho: Crystal Structure Analysis of Streptomyces aureofaciens Ribonuclease S24A mutant
Classification: HYDROLASE
Source organism: Streptomyces aureofaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2012-08-08
Authors: Sevcik, J., Urbanikova, L.
PDB entry 4ghp: Crystal Structure of D48V||A47D mutant of Human GLTP bound with 12:0 monosulfatide
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-08-08
Authors: Samygina, V.R., Ochoa-Lizarralde, B., Popov, A.N., Malinina, L.
PDB entry 4ghq: Crystal structure of EV71 3C proteinase
Classification: HYDROLASE
Source organism: Human enterovirus 71
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-08-08
Authors: Chen, C., Wu, C., Cai, Q., Li, N., Peng, X., Cai, Y., Yin, K., Chen, X., Wang, X., Zhang, R., Liu, L., Chen, S., Li, J., Lin, T.
PDB entry 4ghr: TGT D102N mutant in complex with lin-benzohypoxanthine inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Zymomonas mobilis subsp. mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-08-08
Authors: Immekus, F., Klebe, G.
PDB entry 4ghs: Crystal structure of human GLTP bound with 12:0 disulfatide (orthorombic form; two subunits in asymmetric unit)
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2012-08-08
Authors: Samygina, V.R., Popov, A.N., Goni-de-Cerio, F., Cabo-Bilbao, A., Malinina, L.
PDB entry 4ght: Crystal structure of EV71 3C proteinase in complex with AG7088
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human enterovirus 71
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2012-08-08
Authors: Chen, C., Wu, C., Cai, Q., Li, N., Peng, X., Cai, Y., Yin, K., Chen, X., Wang, X., Zhang, R., Liu, L., Chen, S., Li, J., Lin, T.
PDB entry 4ghu: Crystal structure of TRAF3/Cardif
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2012-08-08
Authors: Zhang, P.
PDB entry 4ghw: Crystal structure of the complex of Fungal lipase from Thermomyces lanuginosa with decanoic acid at 2.6 A resolution
Classification: HYDROLASE
Source organism: Thermomyces lanuginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2012-08-08
Authors: Yamini, S., Sinha, M., Mukherjee, J., Gupta, M.N., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4gi0: Crystal structure of CD23 lectin domain mutant E249A
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2012-08-08
Authors: Yuan, D., Sutton, B.J., Dhaliwal, B.
PDB entry 4gi1: Structure of the complex of three phase partition treated lipase from Thermomyces lanuginosa with 16-hydroxypalmitic acid at 2.4 A resolution
Classification: HYDROLASE
Source organism: Thermomyces lanuginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2012-08-08
Authors: Kumar, M., Sinha, M., Mukherjee, J., Gupta, M.N., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4gi2: Crotonyl-CoA Carboxylase/Reductase
Classification: OXIDOREDUCTASE
Source organism: Methylobacterium extorquens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-08-08
Authors: Weidenweber, S., Erb, T.J., Ermler, U.
PDB entry 4gi3: Crystal structure of Greglin in complex with subtilisin
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bacillus licheniformis; Schistocerca gregaria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-08-08
Authors: Kellenberger, C., Roussel, A.
PDB entry 4gi4: tRNA Guanine Transglycosylase in complex with disubstituted lin-benzoguanine inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Zymomonas mobilis subsp. mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2012-08-08
Authors: Immekus, F., Klebe, G.
PDB entry 4gi5: Crystal Structure Of a Putative quinone reductase from Klebsiella pneumoniae (Target PSI-013613)
Classification: OXIDOREDUCTASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-08-08
Authors: Kumar, P.R., Ahmed, M., Banu, N., Bhosle, R., Bonanno, J., Chamala, S., Chowdhury, S., Gizzi, A., Glen, S., Hammonds, J., Hillerich, B., Love, J.D., Seidel, R., Stead, M., Toro, R., Washington, E., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4gi6: Crystal structure of the MUTB F164L mutant in complex with glucose
Classification: ISOMERASE
Source organism: Rhizobium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2012-08-08
Authors: Lipski, A., Haser, R., Aghajari, N.
PDB entry 4gi7: Crystal structure of Klebsiella pneumoniae pantothenate kinase in complex with a pantothenate analogue
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-08-08
Authors: Li, B., Tempel, W., Smil, D., Bolshan, Y., Hong, B.S., Park, H.W., Structural Genomics Consortium (SGC)
PDB entry 4gi8: Crystal structure of the MUTB F164L mutant from crystals soaked with the substrate sucrose
Classification: ISOMERASE
Source organism: Rhizobium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-08-08
Authors: Lipski, A., Haser, R., Aghajari, N.
PDB entry 4gi9: Crystal structure of the MUTB F164L mutant from crystals soaked with Trehalulose
Classification: ISOMERASE
Source organism: Rhizobium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2012-08-08
Authors: Lipski, A., Haser, R., Aghajari, N.
PDB entry 4gia: Crystal structure of the MUTB F164L mutant from crystals soaked with isomaltulose
Classification: ISOMERASE
Source organism: Rhizobium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2012-08-08
Authors: Lipski, A., Haser, R., Aghajari, N.
PDB entry 4gib: 2.27 Angstrom Crystal Structure of beta-Phosphoglucomutase (pgmB) from Clostridium difficile
Classification: ISOMERASE
Source organism: Clostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2012-08-08
Authors: Minasov, G., Halavaty, A., Shuvalova, L., Dubrovska, I., Winsor, J., Grimshaw, S., Papazisi, L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4gic: Crystal Structure Of a Putative Histidinol dehydrogenase (Target PSI-014034) from Methylococcus capsulatus
Classification: OXIDOREDUCTASE
Source organism: Methylococcus capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.052 Å
Deposited: 2012-08-08
Authors: Kumar, P.R., Ahmed, M., Banu, N., Bhosle, R., Bonanno, J., Chamala, S., Chowdhury, S., Gizzi, A., Glen, S., Hammonds, J., Hillerich, B., Love, J.D., Seidel, R., Stead, M., Toro, R., Washington, E., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4gid: Structure of beta-secretase complexed with inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-08-08
Authors: Ghosh, A., Tang, J., Venkateswara, R.K., Yadav, N., Anderson, D., Gavande, N., Huang, X., Terzyan, S.
PDB entry 4gie: Crystal structure of prostaglandin F synthase from Trypanosoma cruzi bound to NADP
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2012-08-08
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4gif: C-terminal coiled-coil domain of transient receptor potential channel TRPP3 (PKD2L1, Polycystin-L)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-08-08
Authors: Yu, Y., Ulbrich, M.H., Li, M.-H., Dobbins, S., Zhang, W.K., Tong, L., Isacoff, E.Y., Yang, J.
PDB entry 4gig: crystal structure of T69A mutant of trapped Dnae intein precursor
Classification: SPLICING
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-08-08
Authors: Van Roey, P.
PDB entry 4gih: Tyk2 (JH1) in complex with 2,6-DICHLORO-N-{2-[(CYCLOPROPYLCARBONYL)AMINO]PYRIDIN-4-YL}BENZAMIDE
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-08-08
Authors: Ultsch, M.H.
PDB entry 4gii: Tyk2 (JH1) in complex with 2,6-dichloro-4-cyano-N-{2-[(cyclopropylcarbonyl)amino]pyridin-4-yl}benzamide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2012-08-08
Authors: Ultsch, M.H.
PDB entry 4gij: Crystal Structure of Pseudouridine Monophosphate Glycosidase Complexed with Sulfate
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.941 Å
Deposited: 2012-08-08
Authors: Huang, S., Mahanta, N., Begley, T.P., Ealick, S.E.
PDB entry 4gik: Crystal Structure of Pseudouridine Monophosphate Glycosidase/Linear R5P Adduct
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.187 Å
Deposited: 2012-08-08
Authors: Huang, S., Mahanta, N., Begley, T.P., Ealick, S.E.
PDB entry 4gil: Crystal Structure of Pseudouridine Monophosphate Glycosidase/Linear Pseudouridine 5'-Phosphate Adduct
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.539 Å
Deposited: 2012-08-08
Authors: Huang, S., Mahanta, N., Begley, T.P., Ealick, S.E.
PDB entry 4gim: Crystal Structure of Pseudouridine Monophosphate Glycosidase Complexed with Pseudouridine 5'-phosphate
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.802 Å
Deposited: 2012-08-08
Authors: Huang, S., Mahanta, N., Begley, T.P., Ealick, S.E.
PDB entry 4gin: Crystal structure of the MUTB R284C mutant from crystals soaked with the inhibitor deoxynojirimycin
Classification: ISOMERASE
Source organism: Rhizobium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-08-08
Authors: Lipski, A., Ravaud, S., Robert, X., Haser, R., Aghajari, N.
PDB entry 4gio: Crystal structure of Campylobacter jejuni cj0090
Classification: UNKNOWN FUNCTION
Source organism: Campylobacter jejuni subsp. jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-08-08
Authors: Kawai, F., Yeo, H.J.
PDB entry 4gip: Structure of the cleavage-activated prefusion form of the parainfluenza virus 5 (PIV5) fusion protein
Classification: VIRAL PROTEIN
Source organism: Simian virus 5
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-08-08
Authors: Welch, B.D., Liu, Y., Kors, C.A., Leser, G.P., Jardetzky, T.S., Lamb, R.A.
PDB entry 4giq: Crystal Structure of mouse RANK bound to RANKL
Classification: PROTEIN BINDING/PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-08-08
Authors: Nelson, C.A., Wang, M.W.-H., Fremont, D.H.
PDB entry 4gir: Crystal structure of an enolase family member from vibrio harveyi (efi-target 501692) with homology to mannonate dehydratase, with mg, ethylene glycol and sulfate bound (ordered loops, space group P41212)
Classification: LYASE
Source organism: Vibrio harveyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-08-08
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4gis: crystal structure of an enolase family member from vibrio harveyi (efi-target 501692) with homology to mannonate dehydratase, with mg, glycerol and dicarboxylates bound (mixed loops, space group I4122)
Classification: LYASE
Source organism: Vibrio harveyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-08-08
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4git: Crystal structure of alpha sub-domain of Lon protease from Brevibacillus thermoruber
Classification: HYDROLASE
Source organism: Brevibacillus thermoruber
Experimental method: X-RAY DIFFRACTION
Resolution: 2.882 Å
Deposited: 2012-08-09
Authors: Chen, Y.D., Chang, Y.Y., Hsu, C.H.
PDB entry 4giu: Bianthranilate-like analogue bound in inner site of anthranilate phosphoribosyltransferase (AnPRT; trpD).
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.667 Å
Deposited: 2012-08-09
Authors: Evans, G.L., Baker, E.N., Lott, J.S., TB Structural Genomics Consortium (TBSGC)
PDB entry 4giv: Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ183
Classification: Isomerase, protein binding
Source organism: Burkholderia pseudomallei; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2012-08-09
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4giw: Crystal structure of the RUN domain of human NESCA
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-08-09
Authors: Bai, L., Sun, Q., Jiang, T.
PDB entry 4gix: Crystal structure of human GLTP bound with 12:0 disulfatide
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-08-09
Authors: Samygina, V.R., Ochoa-Lizarralde, B., Malinina, L.
PDB entry 4giy: tRNA Guanine Transglycosylase in complex with disubstituted lin-benzoguanine inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Zymomonas mobilis subsp. mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-08-09
Authors: Immekus, F., Klebe, G.
PDB entry 4giz: Crystal structure of full-length human papillomavirus oncoprotein E6 in complex with LXXLL peptide of ubiquitin ligase E6AP at 2.55 A resolution
Classification: VIRAL PROTEIN
Source organism: Escherichia coli; HOMO SAPIENS; Human papillomavirus type 16
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2012-08-09
Authors: McEwen, A.G., Zanier, K., Charbonnier, S., Poussin, P., Cura, V., Vande Pol, S., Trave, G., Cavarelli, J.
PDB entry 4gj0: Crystal structure of CD23 lectin domain mutant S252A
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.953 Å
Deposited: 2012-08-09
Authors: Yuan, D., Sutton, B.J., Dhaliwal, B.
PDB entry 4gj1: Crystal structure of 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (hisA).
Classification: ISOMERASE
Source organism: Campylobacter jejuni subsp. jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.152 Å
Deposited: 2012-08-09
Authors: Nocek, B., Gu, M., Kwon, K., Anderson, W.F., Joachimiak, A., CSGID, Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4gj2: Tyk2 (JH1) in complex with 2,6-dichloro-N-[2-({[(1R,2R)-2-fluorocyclopropyl]carbonyl}amino)pyridin-4-yl]benzamide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-08-09
Authors: Ultsch, M.H.
PDB entry 4gj3: Tyk2 (JH1) in complex with 2,6-dichloro-4-cyano-N-[2-({[(1R,2R)-2-fluorocyclopropyl]carbonyl}amino)pyridin-4-yl]benzamide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-08-09
Authors: Ultsch, M.H.
PDB entry 4gj4: The Crystal Structure of the soluble Guanylate Cyclase PAS alpha domain from Manduca sexta
Classification: LYASE
Source organism: Manduca sexta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-08-09
Authors: Purohit, R., Montfort, W.R., Weichsel, A.