LiteFold/PDB huggingface dataset:
PDB entry 6zjs: Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with galactose
Classification: HYDROLASE
Source organism: Arthrobacter sp. 32cB
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-06-29
Authors: Rutkiewicz, M., Bujacz, A., Bujacz, G.
PDB entry 6zjt: Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with lactulose
Classification: HYDROLASE
Source organism: Arthrobacter sp. 32cB
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2020-06-29
Authors: Rutkiewicz, M., Bujacz, A., Bujacz, G.
PDB entry 6zju: Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E441Q in complex with saccharose
Classification: HYDROLASE
Source organism: Arthrobacter sp. 32cB
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-06-29
Authors: Rutkiewicz, M., Bujacz, A., Bujacz, G.
PDB entry 6zjv: Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A
Classification: HYDROLASE
Source organism: Arthrobacter sp. 32cB
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-06-29
Authors: Rutkiewicz, M., Bujacz, A., Bujacz, G.
PDB entry 6zjw: Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with galactose
Classification: HYDROLASE
Source organism: Arthrobacter sp. 32cB
Experimental method: X-RAY DIFFRACTION
Resolution: 2.119 Å
Deposited: 2020-06-29
Authors: Rutkiewicz, M., Bujacz, A., Bujacz, G.
PDB entry 6zjx: Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with saccharose
Classification: HYDROLASE
Source organism: Arthrobacter sp. 32cB
Experimental method: X-RAY DIFFRACTION
Resolution: 2.206 Å
Deposited: 2020-06-29
Authors: Rutkiewicz, M., Bujacz, A., Bujacz, G.
PDB entry 6zjy: Respiratory complex I from Thermus thermophilus, NAD+ dataset, minor state
Classification: MEMBRANE PROTEIN
Source organism: Thermus thermophilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.5 Å
Deposited: 2020-06-29
Authors: Kaszuba, K., Tambalo, M., Gallagher, G.T., Sazanov, L.A.
PDB entry 6zjz: Discovery of M5049: a novel selective TLR7/8 inhibitor for treatment of autoimmunity
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.489 Å
Deposited: 2020-06-29
Authors: Musil, D., Lehman, M., Strauss, J.
PDB entry 6zk0: 1.47A human IMPase with ebselen
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2020-06-29
Authors: Bax, B.D., Fenn, G.D.
PDB entry 6zk1: Plant nucleoside hydrolase - ZmNRh2b enzyme
Classification: HYDROLASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2020-06-29
Authors: Morera, S., Vigouroux, A., Kopecny, D.
PDB entry 6zk2: Plant nucleoside hydrolase - ZmNRh2b in complex with forodesine
Classification: HYDROLASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-06-29
Authors: Morera, S., Vigouroux, A., Kopecny, D.
PDB entry 6zk3: Plant nucleoside hydrolase - ZmNRh2b in complex with ribose
Classification: HYDROLASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-06-29
Authors: Morera, S., Vigouroux, A., Kopecny, D.
PDB entry 6zk4: Plant nucleoside hydrolase - ZmNRh2b with a bound adenine
Classification: HYDROLASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-06-29
Authors: Morera, S., Vigouroux, A., Kopecny, D.
PDB entry 6zk5: Plant nucleoside hydrolase - ZmNRh3 enzyme in complex with forodesine
Classification: HYDROLASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-29
Authors: Morera, S., Vigouroux, A., Kopecny, D.
PDB entry 6zk6: Protein Phosphatase 1 (PP1) T320E mutant
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-29
Authors: Salvi, F., Barabas, O., Koehn, M.
PDB entry 6zk7: Crystal Structure of human PYROXD1/FAD complex
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-06-30
Authors: Meinhart, A., Asanovic, I., Martinez, J., Clausen, T.
PDB entry 6zk8: Native crystal structure of anaerobic F420H2-Oxidase from Methanothermococcus thermolithotrophicus at 1.8A resolution
Classification: OXIDOREDUCTASE
Source organism: Methanothermococcus thermolithotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-06-30
Authors: Engilberge, S., Wagner, T., Carpentier, P., Girard, E., Shima, S.
PDB entry 6zk9: Peripheral domain of open complex I during turnover
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zka: Membrane domain of open complex I during turnover
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkb: Membrane domain of closed complex I during turnover
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkc: Complex I during turnover, closed
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkd: Complex I during turnover, open1
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zke: Complex I during turnover, open2
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkf: Complex I during turnover, open3
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkg: Complex I with NADH, closed
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkh: Complex I with NADH, open1
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zki: Complex I with NADH, open2
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkj: Complex I with NADH, open3
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkk: Complex I inhibited by rotenone, closed
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkl: Complex I inhibited by rotenone, open1
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkm: Complex I inhibited by rotenone, open2
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkn: Complex I inhibited by rotenone, open3
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zko: Native complex I, closed
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkp: Native complex I, open1
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkq: Native complex I, open2
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkr: Native complex I, open3
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zks: Deactive complex I, open1
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkt: Deactive complex I, open2
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zku: Deactive complex I, open3
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkv: Deactive complex I, open4
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-06-30
Authors: Kampjut, D., Sazanov, L.A.
PDB entry 6zkw: Crystal structure of InhA:01 TCR in complex with HLA-E bound to InhA (53-61)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2020-06-30
Authors: Srikannathasan, V., Karuppiah, V., Robinson, R.A.
PDB entry 6zkx: Crystal structure of InhA:01 TCR in complex with HLA-E (Y84C) bound to InhA (53-61 GCG)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2020-06-30
Authors: Srikannathasan, V., Karuppiah, V., Robinson, R.A.
PDB entry 6zky: Crystal structure of InhA:01 TCR in complex with HLA-E (S147C) bound to InhA (53-61 H3C)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-06-30
Authors: Srikannathasan, V., Karuppiah, V., Robinson, R.A.
PDB entry 6zkz: Crystal structure of InhA:01 TCR in complex with HLA-E (F116C) bound to InhA (53-61 H4C)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-06-30
Authors: Srikannathasan, V., Karuppiah, V., Robinson, R.A.
PDB entry 6zl0: COPII on membranes, outer coat left-handed rod
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 40 Å
Deposited: 2020-06-30
Authors: Zanetti, G., Hutchings, J.
PDB entry 6zl1: Crystal structure of human serum albumin in complex with the MCL-1 neutralizing Alphabody CMPX-383B
Classification: DE NOVO PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.272 Å
Deposited: 2020-06-30
Authors: Pannecoucke, E., Savvides, S.N., Desmet, J., Lasters, I.
PDB entry 6zl2: Structure of a parallel c-Myc modified with 3' duplex stem-loop overhang
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2020-06-30
Authors: Vianney, Y.M., Weisz, K.
PDB entry 6zl3: CRYSTAL STRUCTURE OF HRAS IN COMPLEX WITH COMPOUND 18 and GDP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.031 Å
Deposited: 2020-06-30
Authors: Kessler, D., Fischer, G., Boettcher, J.
PDB entry 6zl4: the structure of glutamate transporter homologue GltTk in complex with the photo switchable compound (cis)
Classification: TRANSPORT PROTEIN
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-06-30
Authors: Arkhipova, V., Slotboom, D.J., Guskov, A.
PDB entry 6zl5: CRYSTAL STRUCTURE OF KRAS-G12D(C118S) IN COMPLEX WITH BI-2852 AND GDP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.645 Å
Deposited: 2020-06-30
Authors: Kessler, D., Fischer, G., Boettcher, J.
PDB entry 6zl6: Crystal Structure of UDP-Glucuronic acid 4-epimerase from Bacillus cereus in complex with UDP and NAD
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus HuA2-4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-06-30
Authors: Iacovino, L.G., Mattevi, A.
PDB entry 6zl7: CRYSTAL STRUCTURE OF C173S MUTATION IN THE PMGL2 ESTERASE FROM PERMAFROST METAGENOMIC LIBRARY
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-06-30
Authors: Goryaynova, D.A., Boyko, K.M., Nikolaeva, A.Y., Korzhenevskiy, D.A., Kryukova, M.V., Petrovskaya, L.E., Novototskaya-Vlasova, K.A., Rivkina, E.M., Dolgikh, D.A., Kirpichnikov, M.P., Popov, V.O.
PDB entry 6zl9: Structure of a parallel c-Myc modified with 5' duplex stem-loop overhang
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2020-06-30
Authors: Vianney, Y.M., Weisz, K.
PDB entry 6zla: Crystal Structure of UDP-Glucuronic acid 4-epimerase from Bacillus cereus in complex with NAD
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-06-30
Authors: Iacovino, L.G., Mattevi, A.
PDB entry 6zlb: Thioredoxin glutathione reductase from Schistosoma mansoni in complex with Indole-3-carbinol
Classification: PROTEIN BINDING
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-30
Authors: Fata, F., Silvestri, I., Williams, D.L., Angelucci, F.
PDB entry 6zlc: Non-specific dsRNA recognition by wildtype H7N1 RNA-binding domain
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/turkey/Italy/977/1999(H7N1)); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-06-30
Authors: Coste, F., Wacquiez, A., Marc, D., Castaing, B.
PDB entry 6zld: Crystal Structure of UDP-Glucuronic acid 4-epimerase from Bacillus cereus in complex with UDP-Glucuronic acid and NAD
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus HuA2-4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-30
Authors: Iacovino, L.G., Savino, S., Mattevi, A.
PDB entry 6zle: Solution structure of unliganded MLKL executioner domain
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-06-30
Authors: Ruebbelke, M., Bauer, M., Nar, H., Zeeb, M.
PDB entry 6zlf: Aerobic crystal structure of F420H2-Oxidase from Methanothermococcus thermolithotrophicus at 1.8A resolution under 125 bars of krypton
Classification: OXIDOREDUCTASE
Source organism: Methanothermococcus thermolithotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-30
Authors: Engilberge, S., Wagner, T., Carpentier, P., Girard, E., Shima, S.
PDB entry 6zlg: Folding of an iron binding peptide in response to sedimentation is resolved using ferritin as a nano-reactor
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-06-30
Authors: Davidov, G., Abelya, G., Zalk, R., Izbicki, B., Shaibi, S., Spektor, L., Meyron Holtz, E.G., Zarivach, R., Frank, G.A.
PDB entry 6zlh: the structure of glutamate transporter homologue GltTk in complex with the photo switchable compound (trans)
Classification: TRANSPORT PROTEIN
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-06-30
Authors: Arkhipova, V., Slotboom, D.J., Guskov, A.
PDB entry 6zli: CRYSTAL STRUCTURE OF KRAS-G12D IN COMPLEX WITH COMPOUND 13 AND GCP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2020-06-30
Authors: Kessler, D., Fischer, G., Boettcher, J.
PDB entry 6zlj: Crystal Structure of UDP-Glucuronic acid 4-epimerase Y149F mutant from Bacillus cereus in complex with UDP-4-DEOXY-4-FLUORO-Glucuronic acid and NAD
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-06-30
Authors: Iacovino, L.G., Mattevi, A.
PDB entry 6zlk: Equilibrium Structure of UDP-Glucuronic acid 4-epimerase from Bacillus cereus in complex with UDP-Glucuronic acid/UDP-Galacturonic acid and NAD
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus HuA2-4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-06-30
Authors: Iacovino, L.G., Mattevi, A.
PDB entry 6zll: Crystal Structure of UDP-Glucuronic acid 4-epimerase from Bacillus cereus in complex with UDP-Galacturonic acid and NAD
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus HuA2-4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-06-30
Authors: Iacovino, L.G., Savino, S., Mattevi, A.
PDB entry 6zlm: Dihydrolipoyllysine-residue acetyltransferase component of fungal pyruvate dehydrogenase complex with protein X bound
Classification: TRANSFERASE
Source organism: Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2020-06-30
Authors: Forsberg, B.O., Aibara, S., Howard, R.J., Mortezaei, N., Lindahl, E.
PDB entry 6zln: CLK1 bound with GW807982X (Cpd 8)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-06-30
Authors: Schroeder, M., Chaikuad, A., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 6zlo: E2 core of the fungal Pyruvate dehydrogenase complex with asymmetric interior PX30 component
Classification: TRANSFERASE
Source organism: Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-06-30
Authors: Forsberg, B.O., Howard, R.J., Aibara, S., Mortesaei, N., Lindahl, E.
PDB entry 6zlp: Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 4-Aminopiazthiole
Classification: PROTEIN BINDING
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-06-30
Authors: Fata, F., Silvestri, I., Williams, D.L., Angelucci, F.
PDB entry 6zlq: Folding of an iron binding peptide in response to sedimentation is resolved using ferritin as a nano-reactor
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-07-01
Authors: Davidov, G., Abelya, G., Zalk, R., Izbicki, B., Shaibi, S., Spektor, L., Meyron Holtz, E.G., Zarivach, R., Frank, G.A.
PDB entry 6zlr: Soaking competent crystal form of the SARS-CoV-2 Receptor Binding Domain (RBD):CR3022 complex.
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2020-07-01
Authors: de Nicola, G.F., Nichols, C.E.
PDB entry 6zlt: Open-open state of the Bt1762-Bt1763 levan transport system
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-07-01
Authors: White, J.B.R., van den Berg, B., Ranson, N.A.
PDB entry 6zlu: Closed-closed state of the Bt1762-Bt1763 levan transport system
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-07-01
Authors: White, J.B.R., van den Berg, B., Ranson, N.A.
PDB entry 6zlv: MreC
Classification: STRUCTURAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-07-01
Authors: Estrozi, L.F., Contreras-Martel, C.
PDB entry 6zlw: SARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunit
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2020-07-01
Authors: Thoms, M., Buschauer, R., Ameismeier, M., Denk, T., Kratzat, H., Mackens-Kiani, T., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 6zlx: The structure of the ClpX-associated factor PDIP38
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.394 Å
Deposited: 2020-07-01
Authors: Zeth, K., Dougan, D.
PDB entry 6zly: Crystal structure of the complex between PPARgamma LBD and the ligand NV1362 (7a)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2020-07-01
Authors: Pochetti, G., Montanari, R., Capelli, D.
PDB entry 6zlz: Crystal Structure of Merkel Cell Polyomavirus Virus-like Particle
Classification: VIRUS LIKE PARTICLE
Source organism: Merkel cell polyomavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.52 Å
Deposited: 2020-07-01
Authors: Bayer, N.J., Stehle, T., Blaum, B.S.
PDB entry 6zm0: Crystal structure of MreC from Pseudomonas aeruginosa
Classification: STRUCTURAL PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.471 Å
Deposited: 2020-07-01
Authors: Contreras-Martel, C., Dessen, A., Trindade, D.M.
PDB entry 6zm1: Open-closed state of the Bt1762-Bt1763 levan transport system
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2020-07-01
Authors: White, J.B.R., van den Berg, B., Ranson, N.A.
PDB entry 6zm2: Crystal structure of the DEAH-box ATPase Prp2 in complex with ADP-BeF3 and ssRNA
Classification: HYDROLASE
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719); synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-07-01
Authors: Hamann, F., Ficner, R.
PDB entry 6zm3: The structure of an E2 ubiquitin-conjugating complex (UBC2-UEV1) essential for Leishmania amastigote differentiation
Classification: SIGNALING PROTEIN
Source organism: Leishmania mexicana (strain MHOM/GT/2001/U1103)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-07-01
Authors: Burge, R.J., Dodson, E.J., Wilkinson, A.J., Mottram, J.C.
PDB entry 6zm5: Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2020-07-01
Authors: Itoh, Y., Andrell, J., Amunts, A.
PDB entry 6zm6: Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2020-07-01
Authors: Itoh, Y., Andrell, J., Amunts, A.
PDB entry 6zm7: SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-07-01
Authors: Thoms, M., Buschauer, R., Ameismeier, M., Denk, T., Kratzat, H., Mackens-Kiani, T., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 6zm8: Structure of muramidase from Acremonium alcalophilum
Classification: HYDROLASE
Source organism: Sodiomyces alcalophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.78 Å
Deposited: 2020-07-01
Authors: Moroz, O.V., Blagova, E., Taylor, E., Turkenburg, J.P., Skov, L.K., Gippert, G.P., Schnorr, K.M., Ming, L., Ye, L., Klausen, M., Cohn, M.T., Schmidt, E.G.W., Nymand-Grarup, S., Davies, G.J., Wilson, K.S.
PDB entry 6zm9: PHAGE SAM LYASE IN COMPLEX WITH S-METHYL-5'-THIOADENOSINE
Classification: LYASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-07-02
Authors: Guo, X., Kanchugal P, S., Selmer, M.
PDB entry 6zma: Structure of the tRNA-Monooxygenase enzyme MiaE frozen under 140 bar of krypton using the soak and freeze methodology
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-07-02
Authors: Carpentier, P., Atta, M.
PDB entry 6zmb: Structure of the native tRNA-Monooxygenase enzyme MiaE
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-07-02
Authors: Carpentier, P., Atta, M.
PDB entry 6zmc: Structure of the tRNA-Monooxygenase enzyme MiaE frozen under 2000 bar using the high pressure freezing method
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-07-02
Authors: Carpentier, P., Atta, M.
PDB entry 6zmd: Crystal structure of HYPE covalently tethered to BiP bound to AMP-PNP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2020-07-02
Authors: Fauser, J., Gulen, B., Pett, C., Hedberg, C., Itzen, A., Pogenberg, V.
PDB entry 6zme: SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-07-02
Authors: Thoms, M., Buschauer, R., Ameismeier, M., Denk, T., Kratzat, H., Mackens-Kiani, T., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 6zmg: PHAGE SAM LYASE IN COMPLEX WITH S-ADENOSYL-L-HOMOCYSTEINE
Classification: LYASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2020-07-02
Authors: Guo, X., Kanchugal P, S., Selmer, M.
PDB entry 6zmi: SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2020-07-02
Authors: Thoms, M., Buschauer, R., Ameismeier, M., Denk, T., Kratzat, H., Mackens-Kiani, T., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 6zmj: Crystal structure of human GFAT-1 R203H
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.774 Å
Deposited: 2020-07-02
Authors: Ruegenberg, S., Mayr, F., Miethe, S., Atanassov, I., Baumann, U., Denzel, M.S.
PDB entry 6zmk: Crystal structure of human GFAT-1 L405R
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.382 Å
Deposited: 2020-07-02
Authors: Ruegenberg, S., Mayr, F., Miethe, S., Atanassov, I., Baumann, U., Denzel, M.S.
PDB entry 6zml: CryoEM Structure of Merkel Cell Polyomavirus Virus-like Particle
Classification: VIRUS LIKE PARTICLE
Source organism: Merkel cell polyomavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-07-03
Authors: Bayer, N.J., Januliene, D., Stehle, T., Moeller, A., Blaum, B.S.
PDB entry 6zmm: Crystal structure of human NDRG1
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2020-07-03
Authors: Mustonen, V., Kursula, P., Ruskamo, S.
PDB entry 6zmn: Crystal structure of the Smad3-Smad5 MH1 domain chimera bound to the GGCGC site
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.333 Å
Deposited: 2020-07-03
Authors: Pluta, R., Macias, M.J.
PDB entry 6zmo: SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-07-03
Authors: Thoms, M., Buschauer, R., Ameismeier, M., Denk, T., Kratzat, H., Mackens-Kiani, T., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 6zmp: Crystal structure of Chaetomium thermophilum Naa20 in complex with a bisubstrate analogue
Classification: CYTOSOLIC PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2020-07-03
Authors: Layer, D., Kopp, J., Sinning, I.
PDB entry 6zmq: Cytochrome c Heme Lyase CcmF
Classification: MEMBRANE PROTEIN
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2020-07-03
Authors: Brausemann, A., Einsle, O.
PDB entry 6zmr: Porcine ATP synthase Fo domain
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2020-07-03
Authors: Spikes, T.E., Montgomery, M.G., Walker, J.E.
PDB entry 6zms: Coxsackievirus B4 strain E2
Classification: VIRUS
Source organism: Coxsackievirus B4 (strain E2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-07-03
Authors: Flatt, J.W., Domanska, A., Butcher, S.J.
PDB entry 6zmt: SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-07-03
Authors: Thoms, M., Buschauer, R., Ameismeier, M., Denk, T., Kratzat, H., Mackens-Kiani, T., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 6zmu: Crystal structure of the germline-specific thioredoxin protein Deadhead (Thioredoxin-1) from Drospohila melanogaster, P43212
Classification: OXIDOREDUCTASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-07-03
Authors: Baginski, B., Pluta, R., Macias, M.J.
PDB entry 6zmv: Structure of muramidase from Trichobolus zukalii
Classification: HYDROLASE
Source organism: Trichobolus zukalii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-07-04
Authors: Moroz, O.V., Blagova, E., Taylor, E., Turkenburg, J.P., Skov, L.K., Gippert, G.P., Schnorr, K.M., Ming, L., Ye, L., Klausen, M., Cohn, M.T., Schmidt, E.G.W., Nymand-Grarup, S., Davies, G.J., Wilson, K.S.
PDB entry 6zmw: Structure of a human 48S translational initiation complex
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-07-04
Authors: Brito Querido, J., Sokabe, M., Kraatz, S., Gordiyenko, Y., Skehel, M., Fraser, C., Ramakrishnan, V.
PDB entry 6zmx: Crystal structure of hemoglobin from turkey (Meleagiris gallopova) crystallized in orthorhombic form at 1.4 Angstrom resolution
Classification: OXYGEN STORAGE/OXYGEN TRANSPORT
Source organism: Meleagris gallopavo
Experimental method: X-RAY DIFFRACTION
Resolution: 1.389 Å
Deposited: 2020-07-04
Authors: Pandian, R., Shobana, N., Sundaresan, S.S., Sayed, Y., Ponnuswamy, M.N.
PDB entry 6zmy: Crystal structure of hemoglobin from turkey (Meleagiris gallopova) crystallized in monoclinic form at 1.66 Angstrom resolution
Classification: OXYGEN STORAGE/OXYGEN TRANSPORT
Source organism: Meleagris gallopavo
Experimental method: X-RAY DIFFRACTION
Resolution: 1.655 Å
Deposited: 2020-07-04
Authors: Pandian, R., Shobana, N., Sundaresan, S.S., Thangaraj, V., Sayed, Y., Ponnuswamy, M.N.
PDB entry 6zmz: UDPG-bound Trehalose transferase from Thermoproteus uzoniensis
Classification: TRANSFERASE
Source organism: Thermoproteus uzoniensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-07-05
Authors: Bento, I., Mestrom, L., Marsden, S.R., van der Eijk, H., Laustsen, J.U., Jeffries, C.M., Svergun, D.I., Hagedoorn, P.-H., Hanefeld, U.
PDB entry 6zn0: Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with isonicotinamidine
Classification: TRANSFERASE
Source organism: Cricetulus griseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2020-07-06
Authors: Oebbeke, M., Heine, A., Klebe, G.
PDB entry 6zn1: Trehalose transferase bound to alpha-D-glucopyranosyl-beta-galactopyranose from Thermoproteus uzoniensis
Classification: TRANSFERASE
Source organism: Thermoproteus uzoniensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-07-06
Authors: Bento, I., Mestrom, L., Marsden, S.R., van der Eijk, H., Laustsen, J.U., Jeffries, C.M., Svergun, D.I., Hagedoorn, P.-H., Hanefeld, U.
PDB entry 6zn2: Partial structure of tyrosine hydroxylase in complex with dopamine showing the catalytic domain and an alpha-helix from the regulatory domain involved in dopamine binding.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2020-07-06
Authors: Bueno-Carrasco, M.T., Cuellar, J., Santiago, C., Valpuesta, J.M., Martinez, A., Flydal, M.I.
PDB entry 6zn3: Plasmodium facliparum glideosome trimeric sub-complex
Classification: MOTOR PROTEIN
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2020-07-06
Authors: Pazicky, S., Loew, C.
PDB entry 6zn4: MaeB malic enzyme domain apoprotein
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.679 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6zn5: SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-07-06
Authors: Thoms, M., Buschauer, R., Ameismeier, M., Denk, T., Kratzat, H., Mackens-Kiani, T., Cheng, J., Berninghausen, O., Becker, T., Beckmann, R.
PDB entry 6zn6: Protein polybromo-1 (PB1 BD2) Bound To MW278
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2020-07-06
Authors: Preuss, F., Mathea, S., Chatterjee, D., Wanior, M., Joerger, A.C., Knapp, S.
PDB entry 6zn7: MaeB malic enzyme domain apoprotein
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6zn8: Crystal structure of the H. influenzae VapXD toxin-antitoxin complex
Classification: TOXIN
Source organism: Haemophilus influenzae (strain 86-028NP)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.211 Å
Deposited: 2020-07-06
Authors: Bertelsen, M.B., Senissar, M., Nielsen, M.H., Bisiak, F., Cunha, M.V., Molinaro, A.L., Daines, D.A., Brodersen, D.E.
PDB entry 6zn9: MaeB PTA domain apoprotein
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6zna: Porcine ATP synthase Fo domain
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2020-07-06
Authors: Spikes, T.E., Montgomery, M.G., Walker, J.E.
PDB entry 6znb: PHAGE SAM LYASE IN APO STATE
Classification: LYASE
Source organism: Bacteriophage sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-07-06
Authors: Eckhard, U., Kanchugal P, S., Selmer, M.
PDB entry 6znc: Structural basis of reactivation of oncogenic p53 mutants by a small molecule: methylene quinuclidinone (MQ). Human wild-type p53DBD bound to DNA and MQ: wt-DNA-MQ (I)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-07-06
Authors: Rozenberg, H., Degtjarik, O., Diskin-Posner, Y., Shakked, Z.
PDB entry 6znd: [1,2,4]Triazolo[1,5-a]pyrimidine Phosphodiesterase 2 Inhibitors
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-07-06
Authors: Tresadern, G., Leonard, P.M.
PDB entry 6zne: MaeB PTA domain R535E mutant
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.393 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6zng: MaeB full-length acetyl-CoA bound state
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6znh: Structure of the Salmonella PrgI needle filament attached to the basal body
Classification: PROTEIN TRANSPORT
Source organism: Salmonella typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-07-06
Authors: Lunelli, M., Kotov, V., Wald, J., Kolbe, M., Marlovits, T.C.
PDB entry 6zni: Structure of the Shigella MxiH needle filament attached to the basal body
Classification: PROTEIN TRANSPORT
Source organism: Shigella flexneri 5a str. M90T
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-07-06
Authors: Lunelli, M., Kotov, V., Marlovits, T.C., Kolbe, M.
PDB entry 6znj: MaeB full-length enzyme apoprotein form
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6znk: MaeB PTA domain N718D mutant
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.039 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6znl: Cryo-EM structure of the dynactin complex
Classification: STRUCTURAL PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-07-06
Authors: Lau, C.K., Lacey, S.E., Carter, A.P.
PDB entry 6znm: The pointed end complex of dynactin bound to BICDR1
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-07-06
Authors: Lau, C.K., Lacey, S.E., Carter, A.P.
PDB entry 6znn: The pointed end complex of dynactin bound to Hook3
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2020-07-06
Authors: Lau, C.K., Lacey, S.E., Carter, A.P.
PDB entry 6zno: The pointed end complex of dynactin with the p150 projection docked
Classification: STRUCTURAL PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.8 Å
Deposited: 2020-07-06
Authors: Lau, C.K., Lacey, S.E., Carter, A.P.
PDB entry 6znp: Crystal Structure of DUF1998 helicase MrfA bound to DNA
Classification: HYDROLASE
Source organism: Bacillus subtilis (strain 168); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2020-07-06
Authors: Roske, J.J., Liu, S., Loll, B., Neu, U., Wahl, M.C.
PDB entry 6znq: Crystal Structure of DUF1998 helicase MrfA bound to DNA and AMPPNP
Classification: HYDROLASE
Source organism: Bacillus subtilis (strain 168); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.34 Å
Deposited: 2020-07-06
Authors: Roske, J.J., Liu, S., Loll, B., Neu, U., Wahl, M.C.
PDB entry 6znr: MaeB PTA domain R535A mutant
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.217 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6zns: Crystal Structure of DUF1998 helicase MrfA
Classification: HYDROLASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2020-07-06
Authors: Roske, J.J., Liu, S., Loll, B., Neu, U., Wahl, M.C.
PDB entry 6znt: MaeB PTA domain, acetyl-CoA bound form
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6znu: MaeB PTA domain E544R mutant
Classification: OXIDOREDUCTASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2020-07-06
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6znv: Protein polybromo-1 (PB1 BD2) Bound To DP28
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2020-07-06
Authors: Preuss, F., Mathea, S., Chatterjee, D., Wanior, M., Joerger, A.C., Knapp, S.
PDB entry 6znw: Methanosaeta concilii ATP citrate lyase (D541A mutant) in complex with (3S)-citryl-CoA.
Classification: LYASE
Source organism: Methanothrix soehngenii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.121 Å
Deposited: 2020-07-06
Authors: Verschueren, K.H.G., Verstraete, K.
PDB entry 6znx: Ribokinase from Thermus Species
Classification: TRANSFERASE
Source organism: Thermus sp. 2.9
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-07-07
Authors: Timofeev, V.I., Abramchik, Y.A., Tuzova, E.S., Esipova, L.V., Mikheeva, O.O., Kostromina, M.A., Kuranova, I.P., Esipov, R.S.
PDB entry 6zny: 1.50 A resolution 3-methylcatechol (3-methylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
Classification: METAL BINDING PROTEIN
Source organism: Sporosarcina pasteurii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-07-07
Authors: Mazzei, L., Cianci, M., Musiani, F., Ciurli, S.
PDB entry 6znz: 1.89 A resolution 4-methylcatechol (4-methylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
Classification: METAL BINDING PROTEIN
Source organism: Sporosarcina pasteurii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2020-07-07
Authors: Mazzei, L., Cianci, M., Musiani, F., Ciurli, S.
PDB entry 6zo0: 2.23 A resolution 3,4-dimethylcatechol (3,4-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
Classification: METAL BINDING PROTEIN
Source organism: Sporosarcina pasteurii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2020-07-07
Authors: Mazzei, L., Cianci, M., Musiani, F., Ciurli, S.
PDB entry 6zo1: 1.61 A resolution 3,5-dimethylcatechol (3,5-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
Classification: METAL BINDING PROTEIN
Source organism: Sporosarcina pasteurii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2020-07-07
Authors: Mazzei, L., Cianci, M., Musiani, F., Ciurli, S.
PDB entry 6zo2: 1.65 A resolution 4,5-dimethylcatechol (4,5-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
Classification: METAL BINDING PROTEIN
Source organism: Sporosarcina pasteurii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-07-07
Authors: Mazzei, L., Cianci, M., Musiani, F., Ciurli, S.
PDB entry 6zo3: 1.55 A resolution 3,6-dimethylcatechol (3,6-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
Classification: METAL BINDING PROTEIN
Source organism: Sporosarcina pasteurii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-07-07
Authors: Mazzei, L., Cianci, M., Musiani, F., Ciurli, S.
PDB entry 6zo4: The pointed end complex of dynactin bound to BICD2
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.2 Å
Deposited: 2020-07-07
Authors: Lau, C.K., Lacey, S.E., Carter, A.P.
PDB entry 6zo5: Fusidic acid binding to the TM1/TM2 groove of AcrB-G619P_G621P
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-07-07
Authors: Tam, H.K., Foong, W.E., Pos, K.M.
PDB entry 6zo6: Minocycline binding to the deep binding pocket of AcrB-G619P
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-07-07
Authors: Tam, H.K., Foong, W.E., Pos, K.M.
PDB entry 6zo7: 3-Formylrifamycin SV binding to the access pocket of AcrB-G619P L and T protomer
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2020-07-07
Authors: Tam, H.K., Foong, W.E., Pos, K.M.
PDB entry 6zo8: Minocycline binding to the deep binding pocket of AcrB-G621P
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-07-07
Authors: Tam, H.K., Foong, W.E., Pos, K.M.
PDB entry 6zo9: Binding of two rifabutins to the access pocket of AcrB-G621P T protomer
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-07-07
Authors: Tam, H.K., Foong, W.E., Pos, K.M.
PDB entry 6zoa: Partially induced AcrB T protomer and DDM binding to the TM8/PC2 pathway of AcrB L2 protomer
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2020-07-07
Authors: Tam, H.K., Foong, W.E., Pos, K.M.
PDB entry 6zob: 3-Formylrifamycin SV binding to the access pocket of AcrB L protomer
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-07-07
Authors: Tam, H.K., Foong, W.E., Pos, K.M.
PDB entry 6zoc: Erythromycin binding to the access pocket of AcrB-G616P L protomer and 3-formylrifamycin SV binding to the access pocket of AcrB-G616P T protomer
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2020-07-07
Authors: Tam, H.K., Foong, W.E., Pos, K.M.
PDB entry 6zod: Fusidic acid binding to the allosteric deep transmembrane domain binding pocket, TM7/TM8 groove, and TM1/TM2 groove of the fully induced AcrB T protomer
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12); synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2020-07-07
Authors: Oswald, C., Tam, H.K., Pos, K.M.
PDB entry 6zoe: AcrB-F563A symmetric T protomer
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12); synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2020-07-07
Authors: Tam, H.K., Foong, W.E., Pos, K.M.