LiteFold/PDB huggingface dataset:
PDB entry 8sqq: Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (Apo Cubic Form 2, F16L mutant)
Classification: METAL BINDING PROTEIN
Source organism: Brucella abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-05-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8sqr: Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (iron bound, F16L mutant)
Classification: METAL BINDING PROTEIN
Source organism: Brucella abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-05-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8sqt: Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (iron bound, cubic form 2, F16L mutant)
Classification: METAL BINDING PROTEIN
Source organism: Brucella abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-05-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8squ: Monomeric MapSPARTA bound with guide RNA and target DNA hybrid
Classification: IMMUNE SYSTEM
Source organism: Maribacter polysiphoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2023-05-04
Authors: Shen, Z.F., Yang, X.Y., Fu, T.M.
PDB entry 8sqv: Proteinase K Multiconformer Model at 333K
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2023-05-04
Authors: Du, S., Wankowicz, S., Yabukarski, F., Doukov, T., Herschlag, D., Fraser, J.S.
PDB entry 8sqw: particulate methane monooxygenase crosslinked with 2,2,2-trifluoroethanol bound
Classification: OXIDOREDUCTASE
Source organism: Methylococcus capsulatus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.16 Å
Deposited: 2023-05-04
Authors: Tucci, F.J., Rosenzweig, A.C.
PDB entry 8sqx: Solution structure of the basal pilin SpaB from Corynebacterium diphtheriae
Classification: CELL ADHESION
Source organism: Corynebacterium diphtheriae NCTC 13129
Experimental method: SOLUTION NMR
Deposited: 2023-05-04
Authors: Sue, C.K., Mahoney, B.J., Cheung, N.A., Clubb, R.T.
PDB entry 8sqz: Structure of human ULK1 complex core (2:2:2 stoichiometry) in the PI3KC3-C1 mixture
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.85 Å
Deposited: 2023-05-04
Authors: Chen, M., Hurley, J.H.
PDB entry 8sr0: CryoEM structure of a therapeutic antibody (favezelimab) bound to human LAG3 local refined
Classification: IMMUNOSUPPRESSANT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2023-05-05
Authors: Mishra, A.K., Shahid, S., Karade, S.S., Mariuzza, R.A.
PDB entry 8sr1: particulate methane monooxygenase crosslinked with 4,4,4-trifluorobutanol bound
Classification: OXIDOREDUCTASE
Source organism: Methylococcus capsulatus str. Bath
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.18 Å
Deposited: 2023-05-05
Authors: Tucci, F.J., Rosenzweig, A.C.
PDB entry 8sr2: particulate methane monooxygenase incubated with 4,4,4-trifluorobutanol
Classification: OXIDOREDUCTASE
Source organism: Methylococcus capsulatus str. Bath
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.36 Å
Deposited: 2023-05-05
Authors: Tucci, F.J., Rosenzweig, A.C.
PDB entry 8sr4: particulate methane monooxygeanse treated with potassium cyanide and copper reloaded
Classification: OXIDOREDUCTASE
Source organism: Methylococcus capsulatus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-05-05
Authors: Tucci, F.J., Jodts, R.J., Rosenzweig, A.C.
PDB entry 8sr5: particulate methane monooxygenase potassium cyanide treated
Classification: OXIDOREDUCTASE
Source organism: Methylococcus capsulatus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-05-05
Authors: Tucci, F.J., Rosenzweig, A.C.
PDB entry 8sr6: Crystal structure of legAS4 from Legionella pneumophila subsp. pneumophila with histone H3 (3-17)peptide
Classification: CELL INVASION
Source organism: Legionella pneumophila subsp. pneumophila; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2023-05-05
Authors: Xu, C., Chung, I.Y.W., Cygler, M.
PDB entry 8sr7: Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium, Adenosine monophosphate, and Ribose-5-phosphate
Classification: TRANSPORT PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.97 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8sr8: Cryo-EM structure of TRPM2 chanzyme in the presence of EDTA (apo state)
Classification: TRANSPORT PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8sr9: Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium
Classification: TRANSPORT PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8sra: Cryo-EM structure of TRPM2 chanzyme in the presence of Calcium
Classification: TRANSPORT PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8srb: Cryo-EM structure of TRPM2 chanzyme in the presence of EDTA and ADP-ribose
Classification: TRANSPORT PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8src: Cryo-EM structure of TRPM2 chanzyme in the presence of Calcium and ADP-ribose
Classification: TRANSPORT PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8srd: Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium and ADP-ribose, open state
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8sre: Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium and ADP-ribose, closed state
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8srf: Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium, ADP-ribose, Adenosine monophosphate, and Ribose-5-phosphate, closed state
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8srg: Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium, Adenosine monophosphate, and Ribose-5-phosphate
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8srh: Cryo-EM structure of TRPM2 chanzyme (E1114A) in the presence of Magnesium and ADP-ribose, open state
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8sri: Cryo-EM structure of TRPM2 chanzyme (E1114A) in the presence of Magnesium and ADP-ribose, closed state
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8srj: Cryo-EM structure of TRPM2 chanzyme (without NUDT9-H domain) in the presence of EDTA, apo state
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8srk: Cryo-EM structure of TRPM2 chanzyme (without NUDT9-H domain) in the presence of Ca and ADP-ribose
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.14 Å
Deposited: 2023-05-05
Authors: Huang, Y., Kumar, S., Lu, W., Du, J.
PDB entry 8srl: Crystal structure of T151V CAO1 in complex with piceatannol
Classification: OXIDOREDUCTASE
Source organism: Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-05-05
Authors: Kiser, P.D.
PDB entry 8srm: Structure of human ULK1 complex core (2:2:2 stoichiometry) of the ATG13(450-517) mutant
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.46 Å
Deposited: 2023-05-05
Authors: Chen, M., Hurley, J.H.
PDB entry 8srn: De novo designed transmembrane antiparallel homo-dimer G-X6-G 01322-42
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.275 Å
Deposited: 2023-05-05
Authors: Golden, J., Dai, X., Mravic, M.
PDB entry 8sro: FoxP3 tetramer on TTTG repeats
Classification: TRANSCRIPTION/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-05
Authors: Leng, F., Hur, S.
PDB entry 8srp: FoxP3 forms Ladder-like multimer to bridge TTTG repeats
Classification: TRANSCRIPTION/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-05-05
Authors: Leng, F., Hur, S.
PDB entry 8srr: Cryo-EM structure of the CBC-ALYREF complex
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-05-06
Authors: Xie, Y., Clarke, B.P., Ren, Y.
PDB entry 8srs: SpRY-Cas9:gRNA complex targeting TAC PAM DNA
Classification: IMMUNE SYSTEM
Source organism: Streptococcus pyogenes; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-05-06
Authors: Hibshman, G.N., Bravo, J.P.K., Taylor, D.W.
PDB entry 8srt: Crystal structure of the O-acetyl-L-serine sulfhydrylase A (CysK) holoenzyme from Staphylococcus aureus NCTC 8325
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-07
Authors: Pederick, J.L., Vandborg, B.C., Bruning, J.B.
PDB entry 8sru: Crystal structure of O-acetyl-L-serine sulfhydrylase A (CysK) from Staphylococcus aureus NCTC 8325 complexed with a serine acetyltransferase (CysE) derived peptide
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-05-07
Authors: Pederick, J.L., Vandborg, B.C., Bruning, J.B.
PDB entry 8srv: Crystal structure of O-acetyl-L-serine sulfhydrylase A (CysK) from Staphylococcus aureus NCTC 8325 complexed with a transcriptional repressor (CymR) derived 10 amino acid peptide
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2023-05-07
Authors: Pederick, J.L., Vandborg, B.C., Bruning, J.B.
PDB entry 8srw: Crystal structure of O-acetyl-L-serine sulfhydrylase A (CysK) from Staphylococcus aureus NCTC 8325 complexed with a modified peptide inhibitor
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-05-07
Authors: Pederick, J.L., Vandborg, B.C., Bruning, J.B.
PDB entry 8srx: Crystal structure of BAK-BAX heterodimer with lysoPC
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2023-05-07
Authors: Brouwer, J.M., Czabotar, P.E., Colman, P.M., Miller, M.S.
PDB entry 8sry: Crystal structure of BAK-BAX heterodimer with C12E8
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-08
Authors: Brouwer, J.M., Czabotar, P.E., Colman, P.M., Miller, M.S.
PDB entry 8srz: Structure of a bacterial death-like domain from Lysobacter enzymogenes
Classification: IMMUNE SYSTEM
Source organism: Lysobacter enzymogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-05-08
Authors: Johnson, A.G., Kranzusch, P.J.
PDB entry 8ss0: Human sterol 14 alpha-demethylase (CYP51) in complex with the reaction intermediate 14 alpha-aldehyde dihydrolanosterol
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-05-08
Authors: Hargrove, T.Y., Wawrzak, Z., Guengerich, F.P., Lepesheva, G.I.
PDB entry 8ss1: Structure of a bacterial death-like domain from Azospirillum sp.
Classification: IMMUNE SYSTEM
Source organism: Azospirillum sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-05-08
Authors: Johnson, A.G., Kranzusch, P.J.
PDB entry 8ss2: Structure of AMPA receptor GluA2 complex with auxiliary subunits TARP gamma-5 and cornichon-2 bound to competitive antagonist ZK and channel blocker spermidine (closed state)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2023-05-08
Authors: Gangwar, S.P., Yen, L.Y., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ss3: Structure of LBD-TMD of AMPA receptor GluA2 in complex with auxiliary subunits TARP gamma-5 and cornichon-2 bound to competitive antagonist ZK and channel blocker spermidine (closed state)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2023-05-08
Authors: Gangwar, S.P., Yen, L.Y., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ss4: Structure of LBD-TMD of AMPA receptor GluA2 in complex with auxiliary subunits TARP gamma-5 and cornichon-2 (apo state)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-08
Authors: Yen, L.Y., Gangwar, S.P., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ss5: Structure of LBD-TMD of AMPA receptor GluA2 in complex with auxiliary subunit TARP gamma-5 (apo state)
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2023-05-08
Authors: Yen, L.Y., Gangwar, S.P., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ss6: Structure of AMPA receptor GluA2 complex with auxiliary subunits TARP gamma-5 and cornichon-2 bound to competitive antagonist ZK, channel blocker spermidine and antiepileptic drug perampanel (closed state)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2023-05-08
Authors: Gangwar, S.P., Yen, L.Y., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ss7: Structure of AMPA receptor GluA2 complex with auxiliary subunits TARP gamma-5 and cornichon-2 bound to competitive antagonist ZK, channel blocker spermidine and antiepileptic drug perampanel (closed state)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2023-05-08
Authors: Gangwar, S.P., Yen, L.Y., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ss8: Structure of AMPA receptor GluA2 complex with auxiliary subunit TARP gamma-5 bound to competitive antagonist ZK and antiepileptic drug perampanel (closed state)
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2023-05-08
Authors: Gangwar, S.P., Yen, L.Y., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ss9: Structure of LBD-TMD of AMPA receptor GluA2 in complex with auxiliary subunit TARP gamma-5 bound to competitive antagonist ZK and antiepileptic drug perampanel (closed state)
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-05-08
Authors: Gangwar, S.P., Yen, L.Y., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ssa: Structure of AMPA receptor GluA2 complex with auxiliary subunits TARP gamma-5 and cornichon-2 bound to glutamate and channel blocker spermidine (desensitized state)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2023-05-08
Authors: Gangwar, S.P., Yen, L.Y., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ssb: Structure of LBD-TMD of AMPA receptor GluA2 in complex with auxiliary subunits TARP gamma-5 and cornichon-2 bound to glutamate and channel blocker spermidine (desensitized state)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2023-05-08
Authors: Gangwar, S.P., Yen, L.Y., Yelshanskaya, M.V., Sobolevsky, A.I.
PDB entry 8ssc: Full-Length Methionine synthase from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-05-08
Authors: Yamada, K., Mendoza, J., Koutmos, M.
PDB entry 8ssd: Methionine synthase, C-terminal fragment, Cobalamin and Reactivation Domains from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-08
Authors: Yamada, K., Mendoza, J., Koutmos, M.
PDB entry 8sse: Methionine synthase, C-terminal fragment, Cobalamin and Reactivation Domains from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2023-05-08
Authors: Yamada, K., Mendoza, J., Koutmos, M.
PDB entry 8ssf: Minimal protein-only/RNA-free Ribonuclease P from Hydrogenobacter thermophilus
Classification: HYDROLASE
Source organism: Hydrogenobacter thermophilus TK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-08
Authors: Mendoza, J., Mallik, L., Wilhelm, C.A., Koutmos, M.
PDB entry 8ssg: Minimal protein-only/RNA-free Ribonuclease P from Hydrogenobacter thermophilus
Classification: HYDROLASE
Source organism: Hydrogenobacter thermophilus TK-6
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-05-08
Authors: Mendoza, J., Wilhelm, C.A., Mallik, L., Koutmos, M.
PDB entry 8ssh: MtrR from Neisseria gonorrhoeae bound to Ethinyl Estradiol
Classification: TRANSCRIPTION
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-05-08
Authors: Hooks, G.M., Brennan, R.G.
PDB entry 8ssi: Structure of Burkholderia pseudomallei deubiquitinase TssM in complex with ubiquitin
Classification: HYDROLASE
Source organism: Burkholderia pseudomallei; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-08
Authors: Szczesna, M., Pruneda, J.N., Thurston, T.L.M.
PDB entry 8ssj: Room-temperature X-ray structure of human mitochondrial serine hydroxymethyltransferase (hSHMT2)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-08
Authors: Drago, V.N., Kovalevsky, A.
PDB entry 8ssk: Citrobacter rodentium contact dependent growth inhibition (CDI) entry and toxin (CdiA-CT) domains
Classification: TOXIN
Source organism: Citrobacter rodentium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-08
Authors: Cuthbert, B.J., Goulding, C.W., Hayes, C.S., Nhan, D.Q.
PDB entry 8ssl: Isobutyryl-CoA mutase fused Q341A in the presence of GTP
Classification: ISOMERASE
Source organism: Cupriavidus metallidurans CH34
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2023-05-08
Authors: Vaccaro, F.A., Drennan, C.L.
PDB entry 8ssm: Citrobacter rodentium contact dependent growth inhibition (CDI) toxin (CdiA-CT) and immunity (CdiI) complex
Classification: TOXIN
Source organism: Citrobacter rodentium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2023-05-08
Authors: Cuthbert, B.J., Goulding, C.W., Hayes, C.S., Nhan, D.Q.
PDB entry 8ssn: Abl kinase in complex with SKI and asciminib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2023-05-08
Authors: Ludewig, H., Kim, C., Kern, D.
PDB entry 8sso: AurA bound to danusertib and inhibiting monobody Mb2
Classification: TRANSFERASE
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-05-08
Authors: Ludewig, H., Kim, C., Kern, D.
PDB entry 8ssp: AurA bound to danusertib and activating monobody Mb1
Classification: TRANSFERASE
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-05-08
Authors: Ludewig, H., Kim, C., Kern, D.
PDB entry 8ssq: ZnFs 3-11 of CCCTC-binding factor (CTCF) Complexed with 35mer DNA 35-4
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2023-05-08
Authors: Horton, J.R., Yang, J., Cheng, X.
PDB entry 8ssr: ZnFs 3-11 of CCCTC-binding factor (CTCF) Complexed with 35mer DNA 35-20
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2023-05-08
Authors: Horton, J.R., Yang, J., Cheng, X.
PDB entry 8sss: ZnFs 1-7 of CCCTC-binding factor (CTCF) Complexed with 23mer
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-05-08
Authors: Horton, J.R., Yang, J., Cheng, X.
PDB entry 8sst: ZnFs 1-7 of CCCTC-binding factor (CTCF) K365T Mutant Complexed with 23mer
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2023-05-08
Authors: Horton, J.R., Yang, J., Cheng, X.
PDB entry 8ssu: ZnFs 3-11 of CCCTC-binding factor (CTCF) Complexed with 19mer DNA
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2023-05-08
Authors: Horton, J.R., Yang, J., Cheng, X.
PDB entry 8ssv: Crystal structure of Grp94 N-terminal domain bound to the purine inhibitor PU-H71.
Classification: CHAPERONE
Source organism: Canis lupus familiaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-05-09
Authors: Que, N.L.S., Gewirth, D.T.
PDB entry 8ssw: Crystal structure of DEAD-box RNA helicase DDX3X in complex with ADP at pre-unwound state
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-09
Authors: Song, H., Ji, X.
PDB entry 8ssx: Crystal structure of Bacillus anthracis dihydrofolate reductase at 1.65-A resolution
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-05-09
Authors: Shaw, G.X., Li, Y., Wu, Y., Yan, H., Ji, X.
PDB entry 8ssy: Room-temperature X-ray structure of Thermus thermophilus serine hydroxymethyltransferase (SHMT) bound with D-Ser in a pseudo-Michaelis complex
Classification: TRANSFERASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-05-09
Authors: Drago, V.N., Kovalevsky, A.
PDB entry 8ssz: The 2alpha3beta stoichiometry of full-length human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine and calcium
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-05-09
Authors: Kang, G., Hibbs, R.E.
PDB entry 8st0: The 2alpha3beta stoichiometry of full-length human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-05-09
Authors: Kang, G., Hibbs, R.E.
PDB entry 8st1: The 3alpha2beta stoichiometry of human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine and calcium
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2023-05-09
Authors: Kang, G., Hibbs, R.E.
PDB entry 8st2: The 3alpha2beta stoichiometry of human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-05-09
Authors: Kang, G., Hibbs, R.E.
PDB entry 8st3: The 2alpha3beta stoichiometry of human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine and calcium
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-05-09
Authors: Kang, G., Hibbs, R.E.
PDB entry 8st4: The 2alpha3beta stoichiometry of human alpha4beta2 nicotinic acetylcholine receptor in complex with acetylcholine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2023-05-09
Authors: Kang, G., Hibbs, R.E.
PDB entry 8st6: Hsa Siglec + Unique domains bound to Neu5Gc alpha2,3 Gal beta OMe
Classification: SUGAR BINDING PROTEIN
Source organism: Streptococcus gordonii str. Challis substr. CH1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-05-09
Authors: Stubbs, H.E., Iverson, T.M.
PDB entry 8st7: Structure of E3 ligase VsHECT bound to ubiquitin
Classification: TRANSFERASE
Source organism: Homo sapiens; Verrucomicrobiota
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2023-05-09
Authors: Franklin, T.G., Pruneda, J.N.
PDB entry 8st8: Structure of E3 ligase SopA bound to ubiquitin
Classification: TRANSFERASE
Source organism: Homo sapiens; Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-05-09
Authors: Franklin, T.G., Pruneda, J.N.
PDB entry 8st9: Structure of E3 ligase NleL bound to ubiquitin
Classification: TRANSFERASE
Source organism: Escherichia coli O157:H7 str. Sakai; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-09
Authors: Franklin, T.G., Pruneda, J.N.
PDB entry 8sta: Isobutyryl-CoA mutase fused in the presence of GMPPCP
Classification: ISOMERASE
Source organism: Cupriavidus metallidurans CH34
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.3 Å
Deposited: 2023-05-09
Authors: Vaccaro, F.A., Drennan, C.L.
PDB entry 8stb: The structure of abxF, an enzyme catalyzing the formation of the chiral spiroketal of an anthrabenzoxocinone antibiotic, (-)-ABX
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2023-05-09
Authors: Luo, Z., Jia, X., Yan, X., Qu, X., Kobe, B.
PDB entry 8stc: S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zinc and soaked with bicarbonate.
Classification: LYASE
Source organism: Lactiplantibacillus plantarum WCFS1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-05-09
Authors: Chatterjee, S., Rankin, J.A., Hu, J., Hausinger, R.P.
PDB entry 8std: S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with authentic substrate NaAD and soaked with CS2
Classification: LYASE
Source organism: Lactiplantibacillus plantarum WCFS1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-05-10
Authors: Chatterjee, S., Rankin, J.A., Hu, J., Hausinger, R.P.
PDB entry 8ste: Cryo-EM structure of NKCC1 Fu_CTD
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2023-05-10
Authors: Moseng, M.A.
PDB entry 8stg: Discovery and clinical validation of RLY-4008, the first highly selective FGFR2 inhibitor with activity across FGFR2 alterations and resistance mutations
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.79 Å
Deposited: 2023-05-10
Authors: Valverde, R., Foster, L.
PDB entry 8sth: human STING with diABZI agonist 15
Classification: IMMUNE SYSTEM/AGONIST
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-05-10
Authors: Duvall, J.R., Bukhalid, R.A.
PDB entry 8sti: human STING with agonist XMT-1616
Classification: IMMUNE SYSTEM/AGONIST
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-05-10
Authors: Duvall, J.R., Bukhalid, R.A.
PDB entry 8stl: Crystal Structure of Nanobody PIK3_Nb16 against wild-type PI3Kalpha
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-10
Authors: Nwafor, J.N., Srinivasan, L., Chen, Z., Gabelli, S.B., Iheanacho, A., Alzogaray, V., Klinke, S.
PDB entry 8stm: Crystal structure of KRAS-G75A mutant, GDP-bound
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-10
Authors: Tran, T.H., Dharmaiah, S., Simanshu, D.K.
PDB entry 8stn: Crystal structure of KRAS-G12D/G75A mutant, GDP-bound
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2023-05-10
Authors: Tran, T.H., Dharmaiah, S., Simanshu, D.K.
PDB entry 8stp: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) varient in Complex with 8-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)indolizine-2-carbonitrile (JLJ555), a non-nucleoside inhibitor
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2023-05-11
Authors: Hollander, K., Frey, K.M., Jorgensen, W.L., Anderson, K.S.
PDB entry 8stq: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) varient in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-2-naphthonitrile (JLJ600), a non-nucleoside inhibitor
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.955 Å
Deposited: 2023-05-11
Authors: Hollander, K., Frey, K.M., Jorgensen, W.L., Anderson, K.S.
PDB entry 8str: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) varient in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)-4-fluorophenoxy)-7-fluoro-2-naphthonitrile (JLJ636), a non-nucleoside inhibitor
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2023-05-11
Authors: Hollander, K., Chan, A.H., Jorgensen, W.L., Anderson, K.S.
PDB entry 8sts: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C, V106A) varient in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)-4-fluorophenoxy)-7-fluoro-2-naphthonitrile (JLJ636), a non-nucleoside inhibitor
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Human immunodeficiency virus 1; Human immunodeficiency virus type 1 BH10
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2023-05-11
Authors: Hollander, K., Jorgensen, W.L., Anderson, K.S.
PDB entry 8stt: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C, V106A) varient in Complex with 8-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)indolizine-2-carbonitrile (JLJ555), a non-nucleoside inhibitor
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 BH10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2023-05-11
Authors: Hollander, K., Jorgensen, W.L., Anderson, K.S.
PDB entry 8stu: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C, V106A) variant in Complex with 8-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)-4-fluorophenoxy)-6-fluoroindolizine-2-carbonitrile (JLJ578), a non-nucleoside inhibitor
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Human immunodeficiency virus type 1 BH10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2023-05-11
Authors: Hollander, K., Jorgensen, W.L., Anderson, K.S.
PDB entry 8stv: Crystal Structure of HIV-1 Reverse Transcriptase (Y181C, V106A) variant in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-2-naphthonitrile (JLJ600), a non-nucleoside inhibitor
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2023-05-11
Authors: Hollander, K., Jorgensen, W.L., Anderson, K.S.
PDB entry 8stw: K384N HUMAN CYSTATHIONINE BETA-SYNTHASE (delta 411-551)
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-11
Authors: Mascarenhas, R., Roman, J., Banerjee, R.
PDB entry 8stx: Crystal structure of the F337A mutation of Trypanosoma cruzi glucokinase in the apo form (open conformation)
Classification: TRANSFERASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-11
Authors: Abiskaroon, B., Carey, S.M., D'Antonio, E.L., Chruszcz, M.
PDB entry 8sty: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI60
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-11
Authors: Blankenship, L.B., Liu, W.R.
PDB entry 8stz: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI37
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-05-11
Authors: Blankenship, L.B., Liu, W.R.
PDB entry 8su0: Unliganded F96H epi-Isozizaene Synthase
Classification: LYASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-05-11
Authors: Eaton, S.A., Christianson, D.W.
PDB entry 8su1: F96H epi-Isozizaene Synthase: complex with 3 Mg2+ and pamidronate
Classification: LYASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2023-05-11
Authors: Eaton, S.A., Christianson, D.W.
PDB entry 8su2: F96H epi-Isozizaene Synthase: complex with 3 Mg2+ and risedronate
Classification: LYASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2023-05-11
Authors: Eaton, S.A., Christianson, D.W.
PDB entry 8su3: F95S epi-Isozizaene Synthase: complex with 3 Mg2+, inorganic pyrophosphate, and benzyl triethyl ammonium cation
Classification: LYASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2023-05-11
Authors: Eaton, S.A., Christianson, D.W.
PDB entry 8su4: F198S epi-Isozizaene Synthase: complex with 3 Mg2+, inorganic pyrophosphate, and benzyl triethyl ammonium cation
Classification: LYASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2023-05-11
Authors: Eaton, S.A., Christianson, D.W.
PDB entry 8su5: F198T epi-Isozizaene Synthase: complex with 3 Mg2+, inorganic pyrophosphate, and benzyl triethyl ammonium cation
Classification: LYASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2023-05-11
Authors: Eaton, S.A., Christianson, D.W.
PDB entry 8su6: Crystal Structure of ArnB Transferase from Klebsiella aerogenes (Lattice Translocation Disorder, P1 form2)
Classification: TRANSFERASE
Source organism: Klebsiella aerogenes KCTC 2190
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-05-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8su7: Crystal structure of Bacillus anthracis dihydroneopterin aldolase
Classification: LYASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-11
Authors: Shaw, G.X., Li, Y., Yan, H., Ji, X.
PDB entry 8su8: Co-crystal structure of KRIT1 with a 1-hydroxy 2-naphthaldehyde derivative (6-(furan-2-yl)-2-hydroxy-1-naphthaldehyde).
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-05-11
Authors: Bruystens, J.G.H.
PDB entry 8su9: E. coli SIR2-HerA complex (hexamer HerA bound with dodecamer Sir2)
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-05-11
Authors: Shen, Z.F., Lin, Q.P., Fu, T.M.
PDB entry 8sua: Structure of M. baixiangningiae DarR-ligand complex
Classification: TRANSCRIPTION
Source organism: Mycobacteriaceae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-05-11
Authors: Schumacher, M.A.
PDB entry 8sub: E. coli SIR2-HerA complex (dodecamer SIR2 pentamer HerA)
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2023-05-11
Authors: Shen, Z.F., Lin, Q.P., Fu, T.M.
PDB entry 8suc: NHL-2 NHL domain
Classification: RNA BINDING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-05-12
Authors: Colson, R.N., Wilce, J.A.
PDB entry 8sud: JC Polyomavirus LTA NLS bound to importin alpha 2
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-05-12
Authors: Cross, E.M., Forwood, J.K., Alvisi, G.
PDB entry 8sue: Human asparagine synthetase (apo-ASNS)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-05-12
Authors: Coricello, A., Zhu, W., Lupia, A., Gratteri, C., Vos, M., Chaptal, V., Alcaro, S., Takagi, Y., Richards, N.
PDB entry 8suf: The complex of TOL-1 ectodomain bound to LAT-1 Lectin domain
Classification: CELL ADHESION
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2023-05-12
Authors: Carmona Rosas, G., Li, J., Arac, D., Ozkan, E.
PDB entry 8sug: Cryo-EM structure of the wild type P. aeruginosa flagellar filament
Classification: STRUCTURAL PROTEIN, PROTEIN FILAMENT
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-05-12
Authors: Kreutzberger, M.A., Nedeljkovic, M., Egelman, E.H., Sundberg, E.J.
PDB entry 8sui: Joint X-ray/neutron structure of Thermus thermophilus serine hydroxymethyltransferase (TthSHMT) in internal aldimine state with L-Ser bound in a pre-Michalis complex
Classification: TRANSFERASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2023-05-12
Authors: Drago, V.N., Kovalevsky, A.
PDB entry 8suj: Joint X-ray/neutron structure of Thermus thermophilus serine hydroxymethyltransferase (TthSHMT) in internal aldimine state
Classification: TRANSFERASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2023-05-12
Authors: Drago, V.N., Kovalevsky, A.
PDB entry 8suk: Structure of Rhodococcus sp. USK13 DarR-c-di-AMP complex
Classification: TRANSCRIPTION
Source organism: Rhodococcus sp. USK13; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-05-12
Authors: Schumacher, M.A.
PDB entry 8sun: TMEM16F 1PBC
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-05-12
Authors: Wu, H., Feng, S., Cheng, Y.
PDB entry 8suo: BA.2/AZD1061/AZD3152 structure analysis
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-05-12
Authors: Oganesyan, V., van Dyk, N., Dippel, A., Barnes, A., O'Connor, E.
PDB entry 8sup: Structure of the 48S translation initiation complex assembled on the encephalomyocarditis virus IRES
Classification: RIBOSOME
Source organism: Encephalomyocarditis virus; Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-05-12
Authors: Bhattacharjee, S., Abaeva, I.S., Brown, Z.P., Arhab, Y., Fallah, H., Jeevan, J.C., Hellen, C.U.T., Frank, J., Pestova, T.V.
PDB entry 8sur: TMEM16F bound with Niclosamide
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-05-13
Authors: Feng, S., Cheng, Y.
PDB entry 8sut: Crystal structure of YisK from Bacillus subtilis in complex with reaction product 4-Hydroxy-2-oxoglutaric acid
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-05-13
Authors: Krieger, I.V., Chemelewski, V., Guo, T., Sperber, A., Herman, J., Sacchettini, J.C.
PDB entry 8suu: Crystal structure of YisK from Bacillus subtilis in apo form
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2023-05-13
Authors: Krieger, I.V., Chemelewski, V., Guo, T., Sperber, A., Herman, J., Sacchettini, J.C.
PDB entry 8suv: CHIP-TPR in complex with the C-terminus of CHIC2
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-05-13
Authors: Cupo, A.R., McDermott, L.E., DeSilva, A.R., Callahan, M., Nix, J.C., Gestwicki, J.E., Page, R.C.
PDB entry 8suw: E. coli SIR2-HerA complex (dodecamer SIR2 bound 4 protomers of HerA)
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2023-05-13
Authors: Shen, Z.F., Lin, Q.P., Fu, T.M.
PDB entry 8sux: Structure of E. coli PtuA hexamer
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-05-13
Authors: Shen, Z.F., Yang, X.Y., Fu, T.M.
PDB entry 8suy: Cryo-EM structure of the human cap binding complex (CBC)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2023-05-14
Authors: Xie, Y., Clarke, B.P., Ren, Y.
PDB entry 8suz: Open State of the SARS-CoV-2 Envelope Protein Transmembrane Domain, Determined by Solid-State NMR
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: SOLID-STATE NMR
Deposited: 2023-05-14
Authors: Medeiros-Silva, J., Dregni, A.J., Somberg, N.H., Hong, M.
PDB entry 8sv0: The crystal structure of the classical binding interface of Importin alpha 2 and nuclear localisation signal sequence in Psittacine siadenovirus core protein VII
Classification: PROTEIN TRANSPORT/VIRAL PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-05-14
Authors: Athukorala, A., Sarker, S., Forwood, J.K., Donnelly, C.M.
PDB entry 8sv1: Caspase-1 complex with interleukin-18
Classification: HYDROLASE, IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-05-15
Authors: Dong, Y., Pascal, D., Jon, K., Wu, H.
PDB entry 8sv2: Pasteurella multocida alpha2,3/2,6 sialyltransferase D141N bound to CMP
Classification: SUGAR BINDING PROTEIN
Source organism: Pasteurella multocida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2023-05-15
Authors: Stubbs, H.E., Iverson, T.M.
PDB entry 8sv3: 7-Deazapurines and 5-Halogenpyrimidine DNA duplex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Halalkalibacterium halodurans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2023-05-15
Authors: Pallan, P.S., Egli, M.
PDB entry 8sv4: 7-Deazapurines and 5-Halogenpyrimidine DNA duplex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Halalkalibacterium halodurans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-05-15
Authors: Pallan, P.S., Egli, M.
PDB entry 8sv5: Crystal structure of Bacillus anthracis dihydroneopterin aldolase in complex with 6-hydroxymethyl-7,8-dihydropterin
Classification: LYASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2023-05-15
Authors: Shaw, G.X., Li, Y., Yan, H., Ji, X.
PDB entry 8sv6: Structure of the M. smegmatis DarR protein
Classification: TRANSCRIPTION
Source organism: Mycolicibacterium smegmatis (Mycobacterium smegmatis)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.56 Å
Deposited: 2023-05-15
Authors: Schumacher, M.A.
PDB entry 8sv7: The 1.53 Angstrom structure of human Tango2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2023-05-15
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 8sv8: Cryo-EM structure of a double loaded human UBA7-UBE2L6-ISG15 thioester mimetic complex from a composite map
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2023-05-15
Authors: Afsar, M., Jia, L., Ruben, E.A., Olsen, S.K.
PDB entry 8sv9: Crystal structure of ULK1 kinase domain with inhibitor MR-2088
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-05-15
Authors: Schonbrunn, E., Sun, L.
PDB entry 8sva: Structure of the Rhodococcus sp. USK13 DarR-20 bp DNA complex
Classification: TRANSCRIPTION/DNA
Source organism: Rhodococcus sp. USK13; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2023-05-15
Authors: Schumacher, M.A.
PDB entry 8svb: Antimicrobial lasso peptide achromonodin-1
Classification: ANTIBIOTIC
Source organism: Achromobacter xylosoxidans
Experimental method: SOLUTION NMR
Deposited: 2023-05-16
Authors: Carson, D.V., Cheung-Lee, W.L., So, L., Link, A.J.
PDB entry 8svc: Crystal Structure of SBP from Klebsiella pneumoniae
Classification: METAL BINDING PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2023-05-16
Authors: Giles, M.W., Cole, G.B., Ng, D., McDevitt, C.A., Moraes, T.F.
PDB entry 8svd: Structure of M. baixiangningiae DarR-DNA complex reveals novel dimer-of-dimers DNA binding
Classification: TRANSCRIPTION/DNA
Source organism: Mycolicibacterium baixiangningiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.49 Å
Deposited: 2023-05-16
Authors: Schumacher, M.A.
PDB entry 8sve: Structure of Monomeric Interleukin-10 Grafted into and Antibody CDR
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-16
Authors: DiDonato, M., Spraggon, G.