LiteFold/PDB huggingface dataset:
PDB entry 8ol8: Solution NMR Structure of Lactamised Alpha-Synuclein 2-12 Peptide in 50% TFE.
Classification: LIPID BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-03-30
Authors: Allen, S.G., Williams, C., Meade, R.M., Crump, M.P., Mason, J.M.
PDB entry 8ol9: Anti-FIXa Fab in complex with human des-(Gla-EGF1) FIXa
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-03-30
Authors: Johansson, E., Svensson, L.A.
PDB entry 8ola: Carbonic Anhydrase IX like mutant in Complex with Steriod_Sulphamoyl inhibitor VK4
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-03-30
Authors: Brynda, J., Rezacova, P.M., Kudova, E.
PDB entry 8olb: SA11 Rotavirus Non-tripsinized Triple Layered Particle
Classification: VIRUS
Source organism: Rotavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-03-30
Authors: Asensio-Cob, D., Perez-Mata, C., Gomez-Blanco, J., Vargas, J., Rodriguez, J.M., Luque, D.
PDB entry 8olc: SA11 Rotavirus Trypsinized Triple Layered Particle
Classification: VIRUS
Source organism: Rotavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2023-03-30
Authors: Asensio-Cob, D., Perez-Mata, C., Gomez-Blanco, J., Vargas, J., Rodriguez, J.M., Luque, D.
PDB entry 8old: Crystal structure of Archaeoglobus fulgidus AfAgo-N protein representing N-L1-L2 domains
Classification: RNA BINDING PROTEIN
Source organism: Archaeoglobus fulgidus DSM 8774
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-03-30
Authors: Manakova, E.N., Zaremba, M., Grazulis, S.
PDB entry 8ole: Cryo-EM reconstruction of VP4 assembly from SA11 Rotavirus Non-Tripsinized Triple Layered Particle
Classification: VIRUS
Source organism: Rotavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-03-30
Authors: Asensio-Cob, D., Perez-Mata, C., Gomez-Blanco, J., Vargas, J., Rodriguez, J.M., Luque, D.
PDB entry 8olf: Carbonic Anhydrase IX like mutant in Complex with Steriod_Sulphamoyl inhibitor BS1982
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-03-30
Authors: Brynda, J., Rezacova, P.M., Kudova, E.
PDB entry 8olg: DI2 Abeta fibril from tg-SwDI mouse
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-03-30
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Schemmert, S., Frieg, B., Willuweit, A., Donner, L., Elvers, M., Nilsson, L.N.G., Syvanen, S., Sehlin, D., Ingelsson, M., Willbold, D., Schroeder, G.F.
PDB entry 8olh: Y345F Variant of Dye Type Peroxidase Aa (DtpAa) from Streptomyces lividans
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2023-03-30
Authors: Lucic, M., Worrall, J.A.R., Hough, M.A.
PDB entry 8oli: Carbonic Anhydrase 2 in Complex with Steriod_Sulphamoyl AKI_12
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-03-30
Authors: Brynda, J., Rezacova, P.M., Kudova, E.
PDB entry 8olj: Crystal structure of Archaeoglobus fulgidus AfAgo-N protein representing N-L1-L2 domains
Classification: RNA BINDING PROTEIN
Source organism: Archaeoglobus fulgidus DSM 8774
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-03-30
Authors: Manakova, E.N., Zaremba, M., Grazulis, S.
PDB entry 8olk: Carbonic Anhydrase 2 in Complex with Steriod_Sulphamoyl AKI_13
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2023-03-30
Authors: Brynda, J., Rezacova, P.M., Kudova, E.
PDB entry 8oll: Staphylococcus aureus ClpP in complex with the natural product beta-lactone inhibitor Cystargolide A at 2.7 A resolution
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-03-30
Authors: Illigmann, A., Vielberg, M.-T., Lakemeyer, M., Wolf, F., Staudt, N., Dema, T., Stange, P., Malik, I., Grond, S., Sieber, S.A., Groll, M., Kaysser, L., Broetz-Oesterhelt, H.
PDB entry 8olm: Carbonic Anhydrase 2 in Complex with Steriod_Sulphamoyl AKI1
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-30
Authors: Brynda, J., Rezacova, P.M., Kudova, E.
PDB entry 8oln: DI1 Abeta fibril from tg-SwDI mouse
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-03-30
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Schemmert, S., Frieg, B., Willuweit, A., Donner, L., Elvers, M., Nilsson, L.N.G., Syvanen, S., Sehlin, D., Ingelsson, M., Willbold, D., Schroeder, G.F.
PDB entry 8olo: Murine type III Abeta fibril from ARTE10 mouse
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-03-30
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Schemmert, S., Frieg, B., Willuweit, A., Donner, L., Elvers, M., Nilsson, L.N.G., Syvanen, S., Sehlin, D., Ingelsson, M., Willbold, D., Schroeder, G.F.
PDB entry 8olp: Y345F/F347Y Variant of Dye Type Peroxidase Aa (DtpAa) from Streptomyces lividans
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2023-03-30
Authors: Lucic, M., Worrall, J.A.R., Hough, M.A.
PDB entry 8olq: DI3 Abeta fibril from tg-SwDI mouse
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-03-30
Authors: Zielinski, M., Peralta Reyes, F.S., Gremer, L., Schemmert, S., Frieg, B., Willuweit, A., Donner, L., Elvers, M., Nilsson, L.N.G., Syvanen, S., Sehlin, D., Ingelsson, M., Willbold, D., Schroeder, G.F.
PDB entry 8olr: Structure of yeast 20S proteasome in complex with the natural product beta-lactone inhibitor Cystargolide A
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-03-30
Authors: Illigmann, A., Vielberg, M.-T., Lakemeyer, M., Wolf, F., Staudt, N., Dema, T., Stange, P., Malik, I., Grond, S., Sieber, S.A., Groll, M., Kaysser, L., Broetz-Oesterhelt, H.
PDB entry 8ols: Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and intronistat B
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-03-30
Authors: Silvestri, I., Marcia, M.
PDB entry 8olt: Mitochondrial complex I from Mus musculus in the active state bound with piericidin A
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2023-03-30
Authors: Grba, D.N., Chung, I., Bridges, H.R., Agip, A.N.A., Hirst, J.
PDB entry 8olu: Leishmania tarentolae proteasome 20S subunit in complex with 1-Benzyl-N-(3-(cyclopropylcarbamoyl)phenyl)-6-oxo-1,6-dihydropyridazine-3-carboxamide
Classification: UNKNOWN FUNCTION
Source organism: Leishmania tarentolae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2023-03-30
Authors: Rowland, P.
PDB entry 8olv: Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and ARN25850
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2023-03-30
Authors: Silvestri, I., Marcia, M.
PDB entry 8olw: Structure of Oceanobacillus iheyensis group II intron before the first step of splicing in the presence of K+, Ca2+ and intronistat B
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2023-03-30
Authors: Silvestri, I., Marcia, M.
PDB entry 8olx: MutSbeta bound to (CAG)2 DNA (canonical form)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-03-30
Authors: Lee, J.-H., Thomsen, M., Daub, H., Steinbacher, S., Sztyler, A., Thieulin-Pardo, G., Neudegger, T., Plotnikov, N., Iyer, R.R., Wilkinson, H., Monteagudo, E., Felsenfeld, D.P., Haque, T., Finley, M., Dominguez, C., Vogt, T.F., Prasad, B.C.
PDB entry 8oly: Structure of Oceanobacillus iheyensis group II intron post first step of splicing in the presence of K+, Mg2+ and intronistat B
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2023-03-30
Authors: Silvestri, I., Marcia, M.
PDB entry 8olz: Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2023-03-30
Authors: Silvestri, I., Marcia, M.
PDB entry 8om0: Structure of Oceanobacillus iheyensis group II intron in the presence of Na+, Mg2+ and intronistat B
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.61 Å
Deposited: 2023-03-31
Authors: Silvestri, I., Marcia, M.
PDB entry 8om1: Mitochondrial complex I from Mus musculus in the active state
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2023-03-31
Authors: Grba, D.N., Chung, I., Bridges, H.R., Agip, A.N.A., Hirst, J.
PDB entry 8om2: Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.57 Å
Deposited: 2023-03-31
Authors: Itoh, Y., Chicherin, I., Kamenski, P., Amunts, A.
PDB entry 8om3: Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23.
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-03-31
Authors: Itoh, Y., Chicherin, I., Kamenski, P., Amunts, A.
PDB entry 8om4: Small subunit of yeast mitochondrial ribosome.
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2023-03-31
Authors: Itoh, Y., Chicherin, I., Kamenski, P., Amunts, A.
PDB entry 8om5: DNA-free open form of MutSbeta
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2023-03-31
Authors: Lee, J.-H., Thomsen, M., Daub, H., Steinbacher, S., Sztyler, A., Thieulin-Pardo, G., Neudegger, T., Plotnikov, N., Iyer, R.R., Wilkinson, H., Monteagudo, E., Felsenfeld, D.P., Haque, T., Finley, M., Dominguez, C., Vogt, T.F., Prasad, B.C.
PDB entry 8om6: Crystal structure of FGF2-STAB, a stable variant of human fibroblast growth factor 2
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2023-03-31
Authors: Marek, M., Chaloupkova, R., de La Bourdonnaye, G.
PDB entry 8om7: Human Mitochondrial Lon Y186E Mutant ADP Bound
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.74 Å
Deposited: 2023-03-31
Authors: Kereiche, S., Bauer, J.A., Matyas, P., Novacek, J., Kutejova, E.
PDB entry 8om8: X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure A)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2023-03-31
Authors: Paolillo, M., Ferraro, G., Merlino, A.
PDB entry 8om9: MutSbeta bound to (CAG)2 DNA (open form)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2023-03-31
Authors: Lee, J.-H., Thomsen, M., Daub, H., Steinbacher, S., Sztyler, A., Thieulin-Pardo, G., Neudegger, T., Plotnikov, N., Iyer, R.R., Wilkinson, H., Monteagudo, E., Felsenfeld, D.P., Haque, T., Finley, M., Dominguez, C., Vogt, T.F., Prasad, B.C.
PDB entry 8oma: MutSbeta bound to 61bp homoduplex DNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-03-31
Authors: Lee, J.-H., Thomsen, M., Daub, H., Steinbacher, S., Sztyler, A., Thieulin-Pardo, G., Neudegger, T., Plotnikov, N., Iyer, R.R., Wilkinson, H., Monteagudo, E., Felsenfeld, D.P., Haque, T., Finley, M., Dominguez, C., Vogt, T.F., Prasad, B.C.
PDB entry 8omb: Carbonic Anhydrase 2 in Complex with Steriod_Sulphamoyl VK42
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-03-31
Authors: Brynda, J., Rezacova, P.M., Kudova, E.
PDB entry 8omc: Y345F/F347Y/Y389F Variant of Dye Type Peroxidase Aa (DtpAa) from Streptomyces lividans
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-31
Authors: Lucic, M., Worrall, J.A.R., Hough, M.A.
PDB entry 8omd: Crystal structure of mKHK in complex with compound-4
Classification: SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-03-31
Authors: Ebenhoch, R., Pautsch, A.
PDB entry 8ome: Crystal structure of hKHK-A in complex with compound-4
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-03-31
Authors: Ebenhoch, R., Pautsch, A.
PDB entry 8omf: Crystal structure of hKHK-C in complex with compound-4
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-03-31
Authors: Ebenhoch, R., Pautsch, A.
PDB entry 8omg: Crystal structure of mKHK (apo)
Classification: SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-03-31
Authors: Ebenhoch, E., Pautsch, P.
PDB entry 8omh: Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl (BS1982)
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-03-31
Authors: Brynda, J., Rezacova, P.M., Kudova, E.
PDB entry 8omi: Crystal structure of the inositol hexakisphosphate kinase EhIP6KA M85 variant in complex with ATP and Mg2+
Classification: TRANSFERASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-03-31
Authors: Schuetz, A., Aguirre, T., Fiedler, D.
PDB entry 8omj: hKHK-C in complex with compound 28
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.978 Å
Deposited: 2023-03-31
Authors: Pautsch, A., Ebenhoch, R.
PDB entry 8omk: hKHK-C in complex with ADP & fructose 1-phosphate
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2023-03-31
Authors: Ebenhoch, R., Pautsch, A.
PDB entry 8oml: Crystal structure of Bdellovibrio bacteriovorus Bd1334 C-terminal domains
Classification: CELL ADHESION
Source organism: Bdellovibrio bacteriovorus HD100
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2023-03-31
Authors: Caulton, S.G., Lovering, A.L.
PDB entry 8omm: Coproporphyrin III - LmCpfC complex soaked 3min with Fe2+
Classification: METAL BINDING PROTEIN
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-03-31
Authors: Gabler, T., Hofbauer, S.
PDB entry 8omn: Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl VK4
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-03-31
Authors: Brynda, J., Rezacova, P.M., Kudova, E.
PDB entry 8omo: DNA-unbound MutSbeta-ATP complex (bent clamp form)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2023-03-31
Authors: Lee, J.-H., Thomsen, M., Daub, H., Steinbacher, S., Sztyler, A., Thieulin-Pardo, G., Neudegger, T., Plotnikov, N., Iyer, R.R., Wilkinson, H., Monteagudo, E., Felsenfeld, D.P., Haque, T., Finley, M., Dominguez, C., Vogt, T.F., Prasad, B.C.
PDB entry 8omp: Carbonic Anhydrase 2 in Complex with Steriod_Sulphamoyl AKI33
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2023-03-31
Authors: Brynda, J., Rezacova, P.M., Kudova, E.
PDB entry 8omq: DNA-unbound MutSbeta-ATP complex (straight clamp form)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2023-03-31
Authors: Lee, J.-H., Thomsen, M., Daub, H., Steinbacher, S., Sztyler, A., Thieulin-Pardo, G., Neudegger, T., Plotnikov, N., Iyer, R.R., Wilkinson, H., Monteagudo, E., Felsenfeld, D.P., Haque, T., Finley, M., Dominguez, C., Vogt, T.F., Prasad, B.C.
PDB entry 8omr: Human tRNA guanine transglycosylase (TGT) bound to tRNAAsp
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-03-31
Authors: Sievers, K., Neumann, P., Susac, L., Trowitzsch, S., Tampe, R., Ficner, R.
PDB entry 8oms: X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure B)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-03-31
Authors: Paolillo, M., Ferraro, G., Merlino, A.
PDB entry 8omt: X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure C)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.097 Å
Deposited: 2023-03-31
Authors: Paolillo, M., Merlino, A., Ferraro, G.
PDB entry 8omu: Cryo-EM structure of rat SLC22A6 bound to alpha-ketoglutaric acid in a low occupancy state
Classification: METAL TRANSPORT
Source organism: Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2023-03-31
Authors: Parker, J.L., Kato, T., Newstead, S.
PDB entry 8omv: Crystal structure of the constitutively active S117E/S181E mutant of human IKK2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.16 Å
Deposited: 2023-03-31
Authors: McEwen, A.G., Li, C., Moro, S., Poussin-Courmontagne, P., Zanier, K.
PDB entry 8omw: Crystal structure of the titin domain Fn3-20
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2023-03-31
Authors: Rees, M., Gautel, M.
PDB entry 8omx: NI,FE-CODH -600mV state : 1 min Dioxygen Exposure
Classification: OXIDOREDUCTASE
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-31
Authors: Basak, Y., Jeoung, J.-H., Dobbek, H.
PDB entry 8omy: NI,FE-CODH -600mV state : 35 min Dioxygen Exposure
Classification: OXIDOREDUCTASE
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2023-03-31
Authors: Basak, Y., Jeoung, J.-H., Dobbek, H.
PDB entry 8omz: Wide inward-open unliganded UraA in complex with a conformation-selective synthetic nanobody
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli O157:H7; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-03-31
Authors: Kuhn, B.T., Geertsma, E.R.
PDB entry 8on0: NI,FE-CODH -600mV state : 90 min Dioxygen Exposure
Classification: OXIDOREDUCTASE
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2023-03-31
Authors: Basak, Y., Jeoung, J.-H., Dobbek, H.
PDB entry 8on1: NI,FE-CODH -600mV state : 4 h Dioxygen Exposure
Classification: OXIDOREDUCTASE
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2023-03-31
Authors: Basak, Y., Jeoung, J.-H., Dobbek, H.
PDB entry 8on2: NI,FE-CODH -600mV state : 24 h Dioxygen Exposure
Classification: OXIDOREDUCTASE
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2023-03-31
Authors: Basak, Y., Jeoung, J.-H., Dobbek, H.
PDB entry 8on3: NI,FE-CODH -320mV + CN state : 24 h Dioxygen Exposure
Classification: OXIDOREDUCTASE
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2023-03-31
Authors: Basak, Y., Jeoung, J.-H., Dobbek, H.
PDB entry 8on4: Structure of the C-terminal domains of the Bdellovibrio bacteriovorus Bd1334 fibre
Classification: CELL ADHESION
Source organism: Bdellovibrio bacteriovorus HD100
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2023-03-31
Authors: Caulton, S.G., Lovering, A.L.
PDB entry 8on5: Structure of the tail fibre from an extracellular contractile injection system from Photorhabdus bacteria
Classification: CELL ADHESION
Source organism: Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-03-31
Authors: Godfrey, A.E., Diaz-Saez, L.
PDB entry 8on7: FMRFa-bound Malacoceros FaNaC1 in lipid nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Malacoceros fuliginosus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-04-01
Authors: Kalienkova, V., Dandamudi, M., Paulino, C., Lynagh, T.
PDB entry 8on8: Apo Malacoceros FaNaC1 in lipid nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Malacoceros fuliginosus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-04-01
Authors: Kalienkova, V., Dandamudi, M., Paulino, C., Lynagh, T.
PDB entry 8on9: ASSFVRIa-bound Malacoceros FaNaC1 in lipid nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Malacoceros fuliginosus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-04-01
Authors: Kalienkova, V., Dandamudi, M., Paulino, C., Lynagh, T.
PDB entry 8ona: FMRFa-bound Malacoceros FaNaC1 in lipid nanodiscs in presence of diminazene
Classification: MEMBRANE PROTEIN
Source organism: Malacoceros fuliginosus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-04-01
Authors: Kalienkova, V., Dandamudi, M., Paulino, C., Lynagh, T.
PDB entry 8onb: Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
Classification: CELL ADHESION
Source organism: Bdellovibrio bacteriovorus HD100
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2023-04-01
Authors: Caulton, S.G., Lovering, A.L.
PDB entry 8onc: Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
Classification: CELL ADHESION
Source organism: Bdellovibrio bacteriovorus HD100
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-04-01
Authors: Caulton, S.G., Lovering, A.L.
PDB entry 8ond: Structure of the C-terminal domains of the Bdellovibrio bacteriovorus Bd2133 fibre
Classification: CELL ADHESION
Source organism: Bdellovibrio bacteriovorus HD100
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-04-02
Authors: Caulton, S.G., Lovering, A.L.
PDB entry 8one: Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Asp190Ser mutant - Cocrystal with Fe2+, Mn2+, UDP-Glucose
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-04-02
Authors: Mattoteia, D., De Marco, M., Pinnola, A., Faravelli, S., Scietti, L., Forneris, F.
PDB entry 8onf: Crystal structure of Bdellovibrio bacteriovorus Bd2439 fibre C-terminal domains with ethylene glycol
Classification: CELL ADHESION
Source organism: Bdellovibrio bacteriovorus HD100
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2023-04-02
Authors: Caulton, S.G., Lovering, A.L.
PDB entry 8ong: Structure of the endothelial monocyte activating polypeptide II (EMAP II) in solution
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR, SOLUTION SCATTERING
Deposited: 2023-04-02
Authors: Lozhko, D., Kolomiiets, L., Kornelyuk, A.I., Zhukov, I.
PDB entry 8onh: Variant Surface Glycoprotein VSG11wt-Oil
Classification: MEMBRANE PROTEIN
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2023-04-03
Authors: Zeelen, J.P., Stebbins, C.E., Foti, K., Gkeka, A., Vlachou, E.P.
PDB entry 8oni: Human insulin in complex with the analytical antibody S1 Fab
Classification: HORMONE
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-04-03
Authors: Johansson, E.
PDB entry 8onj: Crystal structure of D-amino acid aminotransferase from Aminobacterium colombiense point mutant R88L
Classification: TRANSFERASE
Source organism: Aminobacterium colombiense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-04-03
Authors: Matyuta, I.O., Boyko, K.M., Minyaev, M.E., Shilova, S.A., Bezsudnova, E.Y., Popov, V.O.
PDB entry 8onk: Human insulin in complex with the analytical antibody S1 Fab and the analytical antibody HUI-001 Fab
Classification: HORMONE
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.403 Å
Deposited: 2023-04-03
Authors: Johansson, E.
PDB entry 8onl: Crystal structure of D-amino acid aminotransferase from Aminobacterium colombiense point mutant E113A
Classification: TRANSFERASE
Source organism: Aminobacterium colombiense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-04-03
Authors: Matyuta, I.O., Boyko, K.M., Minyaev, M.E., Shilova, S.A., Bezsudnova, E.Y., Popov, V.O.
PDB entry 8onm: Crystal structure of D-amino acid aminotransferase from Aminobacterium colombiense point mutant E113A complexed with D-glutamate
Classification: TRANSFERASE
Source organism: Aminobacterium colombiense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-04-03
Authors: Matyuta, I.O., Boyko, K.M., Minyaev, M.E., Shilova, S.A., Bezsudnova, E.Y., Popov, V.O.
PDB entry 8onn: Crystal structure of D-amino acid aminotransferase from Aminobacterium colombiense point mutant E113A complexed with 3-aminooxypropionic acid
Classification: TRANSFERASE
Source organism: Aminobacterium colombiense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-03
Authors: Matyuta, I.O., Boyko, K.M., Minyaev, M.E., Shilova, S.A., Bezsudnova, E.Y., Popov, V.O.
PDB entry 8ono: Modified oligopeptidase B from S. proteamaculans in intermediate conformation with 5 spermine molecule at 1.65 A resolution
Classification: HYDROLASE
Source organism: Serratia proteamaculans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-04-03
Authors: Petrenko, D.E., Boyko, K.M., Nikolaeva, A.Y., Vlaskina, A.V., Mikhailova, A.G., Timofeev, V.I., Rakitina, T.V.
PDB entry 8onp: Human insulin trans-HypB26-DTIA analogue
Classification: HORMONE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-04-03
Authors: Brzozowski, A.M., Zakova, L., Jiracek, J.
PDB entry 8onq: Structure of the amyloid-forming peptide Ac-EFIAWL from human GLP-1
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-04-03
Authors: Durvanger, Z.
PDB entry 8onr: Crystal structure of human insulin trans-HypB26-DTI analogue
Classification: HORMONE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-04-03
Authors: Brzozowski, A.M., Zakova, L., Jiracek, J.
PDB entry 8ons: TAF15 amyloid fold in atypical FTLD - Individual 1
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.97 Å
Deposited: 2023-04-03
Authors: Tetter, S., Ryskeldi-Falcon, B.
PDB entry 8ont: Structure of Setaria italica NRAT in complex with a nanobody
Classification: TRANSPORT PROTEIN
Source organism: Lama glama; Setaria italica
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2023-04-03
Authors: Ramanadane, K., Liziczai, M., Markovic, D., Straub, M.S., Rosalen, G.T., Udovcic, A., Dutzler, R., Manatschal, C.
PDB entry 8onu: Solution structure of thanatin analogue 7 in complex with LptAm(Ab)1.0
Classification: ANTIBIOTIC
Source organism: Acinetobacter baumannii; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2023-04-04
Authors: Oi, K.K., Moehle, K., Zerbe, O.
PDB entry 8onv: KRAS-G13D in complex with BI-2493
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2023-04-04
Authors: Boettcher, J., Herdeis, L.
PDB entry 8onw: Crystal structure of the hetero-dimeric complex from Archaeoglobus fulgidus PRC1 and PRC2 domains
Classification: CELL CYCLE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2023-04-04
Authors: Ciziene, D., Bellini, D., Lowe, J.Y.
PDB entry 8onx: High resolution structure of Chaetomium thermophilum MAP2
Classification: METAL BINDING PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-04-04
Authors: Klein, M.A., Wild, K., Kisonaite, M., Sinning, I.
PDB entry 8ony: Human Methionine Aminopeptidase 2 at the 80S ribosome
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-04-04
Authors: Klein, M.A., Wild, K., Kisonaite, M., Sinning, I.
PDB entry 8onz: Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome
Classification: METAL BINDING PROTEIN
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2023-04-04
Authors: Klein, M.A., Wild, K., Kisonaite, M., Sinning, I.
PDB entry 8oo0: Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
Classification: METAL BINDING PROTEIN
Source organism: Thermochaetoides thermophila; Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-04-04
Authors: Klein, M.A., Wild, K., Kisonaite, M., Sinning, I.
PDB entry 8oo1: Wide inward-open liganded UraA in complex with a conformation-selective synthetic nanobody
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli O157:H7; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2023-04-04
Authors: Kuhn, B.T., Geertsma, E.R.
PDB entry 8oo2: ChdA complex with amido-chelocardin
Classification: TRANSCRIPTION
Source organism: Amycolatopsis sulphurea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-04-04
Authors: Koehnke, J., Sikandar, A.
PDB entry 8oo3: X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 5 days soaking
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-04-04
Authors: Ferraro, G., Merlino, A.
PDB entry 8oo4: X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 1 month soaking
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-04-04
Authors: Ferraro, G., Merlino, A.
PDB entry 8oo5: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 13
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-04-04
Authors: Schroeder, M., Renatus, M.
PDB entry 8oo6: Pol I bound to extended and displaced DNA section - closed conformation
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli 'BL21-Gold(DE3)pLysS AG'; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2023-04-04
Authors: Botto, M., Borsellini, A., Lamers, M.H.
PDB entry 8oo7: CryoEM Structure INO80core Hexasome complex composite model state1
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Thermochaetoides thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-04-04
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8oo8: Three-Dimensional Structure of Human Carbonic Anhydrase II in Complex with a Covalent Inhibitor
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-04-04
Authors: Leitans, J., Tars, K.
PDB entry 8oo9: CryoEM Structure INO80core Hexasome complex ATPase-DNA refinement state1
Classification: DNA BINDING PROTEIN
Source organism: Thermochaetoides thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-04-04
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8ooa: CryoEM Structure INO80core Hexasome complex Hexasome refinement state1
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2023-04-04
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8ooc: CryoEM Structure INO80core Hexasome complex Rvb core refinement state1
Classification: DNA BINDING PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-04-05
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8ood: Crystal structure of human DCAF1 WD40 repeats (Q1250L) in complex with compound 15
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.497 Å
Deposited: 2023-04-05
Authors: Schroeder, M., Renatus, M.
PDB entry 8oof: CryoEM Structure INO80core Hexasome complex Arp5 Ies6 refinement state1
Classification: DNA BINDING PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-04-05
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8oog: Crystal structure of human MAT2a with S-Adenosylmethionine and a fragment bound in a novel pocket
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.384 Å
Deposited: 2023-04-05
Authors: Schimpl, M.
PDB entry 8ooh: Cryo-EM map of the focused refinement of the subfamily III haloalkane dehalogenase from Haloferax mediterranei dimer forming hexameric assembly.
Classification: HYDROLASE
Source organism: Haloferax mediterranei
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2023-04-05
Authors: Polak, M., Novacek, J., Chmelova, K., Marek, M.
PDB entry 8ooi: Full composite cryo-EM map of p97/VCP in ADP.Pi state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2023-04-05
Authors: Cheng, T.C., Sakata, E., Schuetz, A.K.
PDB entry 8ooj: Crystal structure of dCK C4S-S74E mutant in complex with EdC and UDP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-05
Authors: Saez-Ayala, M., Rebuffet, E., Betzi, S., Morelli, X.
PDB entry 8ook: CryoEM Structure INO80core Hexasome complex Arp5 grappler refinement state1
Classification: DNA BINDING PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.69 Å
Deposited: 2023-04-05
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8ool: Glutamine synthetase from Methanothermococcus thermolithotrophicus with TbXo4 at a resolution of 1.65 A
Classification: LIGASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-04-05
Authors: Mueller, M.-C., Wagner, T.
PDB entry 8oom: Structural and functional studies of geldanamycin amide synthase ShGdmF
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces hygroscopicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-04-05
Authors: Ewert, W., Zeilinger, C., Kirschning, A., Preller, M.
PDB entry 8oon: Glutamine synthetase from Methanothermococcus thermolithotrophicus at a resolution of 2.43 A
Classification: LIGASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-04-05
Authors: Mueller, M.-C., Lemaire, O.N., Wagner, T.
PDB entry 8ooo: Glutamine synthetase from Methanothermococcus thermolithotrophicus in complex with 2-oxoglutarate and MgATP at 2.15 A resolution
Classification: LIGASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 2.149 Å
Deposited: 2023-04-05
Authors: Mueller, M.-C., Wagner, T.
PDB entry 8oop: CryoEM Structure INO80core Hexasome complex composite model state2
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Thermochaetoides thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-04-05
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8ooq: Glutamine synthetase from Methanothermococcus thermolithotrophicus in complex with 2-oxoglutarate and Mg at 2.91 A resolution
Classification: LIGASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2023-04-05
Authors: Mueller, M.-C., Wagner, T.
PDB entry 8oor: CryoEM Structure INO80core Hexasome complex Rvb core refinement state2
Classification: DNA BINDING PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-04-05
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8oos: CryoEM Structure INO80core Hexasome complex ATPase-hexasome refinement state 2
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Thermochaetoides thermophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2023-04-05
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8oot: CryoEM Structure INO80core Hexasome complex Arp5 Ies6 refinement state2
Classification: DNA BINDING PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2023-04-05
Authors: Zhang, M., Jungblut, A., Hoffmann, T., Eustermann, S.
PDB entry 8oou: Double-ring nucleocapsid of the Respiratory Syncytial Virus
Classification: VIRAL PROTEIN
Source organism: Respiratory syncytial virus; Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-04-06
Authors: Gonnin, L., Desfosses, A., Gutsche, I.
PDB entry 8oov: human NME-1 in complex with CoA
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-04-06
Authors: Gouge, J., Hristov, H.D.
PDB entry 8oow: Glutamine synthetase from Methermicoccus shengliensis at a resolution of 2.64 A
Classification: LIGASE
Source organism: Methermicoccus shengliensis DSM 18856
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2023-04-06
Authors: Mueller, M.-C., Lemaire, O.N., Wagner, T.
PDB entry 8oox: Glutamine synthetase from Methermicoccus shengliensis at a resolution of 3.09 A
Classification: LIGASE
Source organism: Methermicoccus shengliensis DSM 18856
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2023-04-06
Authors: Mueller, M.-C., Lemaire, O.N., Wagner, T.
PDB entry 8ooy: Pol I bound to extended and displaced DNA section - open conformation
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli 'BL21-Gold(DE3)pLysS AG'; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-04-06
Authors: Botto, M., Borsellini, A., Lamers, M.H.
PDB entry 8ooz: Glutamine synthetase from Methermicoccus shengliensis in complex with MgATP at 2.7 A resolution
Classification: LIGASE
Source organism: Methermicoccus shengliensis DSM 18856
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-04-06
Authors: Mueller, M.-C., Lemaire, O.N., Wagner, T.
PDB entry 8op0: VHH Z70 mutant 20 in interaction with PHF6 Tau peptide
Classification: IMMUNE SYSTEM
Source organism: Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-04-06
Authors: Dupre, E., Mortelecque, J., NGuyen, M., Hanoulle, X., Landrieu, I.
PDB entry 8op1: Subsection of a helical nucleocapsid of the Respiratory Syncytial Virus
Classification: VIRAL PROTEIN
Source organism: Respiratory syncytial virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-04-06
Authors: Gonnin, L., Desfosses, A., Eleouet, J.F., Galloux, M., Gutsche, I.
PDB entry 8op2: Stacks of nucleocapsid rings of the N1-370 mutant of the human Respiratory Syncytial Virus
Classification: VIRAL PROTEIN
Source organism: Human respiratory syncytial virus A strain Long; Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-04-06
Authors: Gonnin, L., Desfosses, A., Gutsche, I.
PDB entry 8op3: Cryo-EM structure of P5A-ATPase CtSpf1 (E1 state)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2023-04-06
Authors: Li, P., Gourdon, P.
PDB entry 8op4: Cryo-EM structure of P5A-ATPase CtSpf1 (E1-ATP state)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-04-06
Authors: Li, P., Gourdon, P.
PDB entry 8op5: Cryo-EM structure of P5A-ATPase CtSpf1 (E1P-ADP state with membranous-feature bound)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2023-04-06
Authors: Li, P., Gourdon, P.
PDB entry 8op6: Cryo-EM structure of P5A-ATPase CtSpf1 (E1P state with cytosolic-feature bound)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2023-04-06
Authors: Li, P., Gourdon, P.
PDB entry 8op7: Cryo-EM structure of P5A-ATPase CtSpf1 ( E2P state with endogenous cargo bound)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-04-06
Authors: Li, P., Gourdon, P.
PDB entry 8op8: Cryo-EM structure of P5A-ATPase CtSpf1 (E2.Pi state with endogenous helix cargo bound)
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae; Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2023-04-06
Authors: Li, P., Gourdon, P.
PDB entry 8op9: CryoEM structure of human rho1 GABAA receptor in complex with GABA
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-04-06
Authors: Chen, F., Victor, T., John, C., Rebecca, J.H., Lindahl, E.
PDB entry 8opa: Virus-like Particle based on PVY coat protein with stacked-ring architecture
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8opb: Virus-like Particle based on PVY coat protein with RNA-free helical architecture
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8opc: Virus-like Particle based on PVY coat protein with helical architecture encapsidating ssRNA
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8opd: Virus-like Particle based on PVY coat protein with dC40 deletion with stacked-ring architecture
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8ope: Virus-like Particle based on PVY coat protein with dC40 deletion with helical architecture encapsidating ssRNA
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8opf: Virus-like Particle based on PVY coat protein with dC60 deletion with RNA-free helical architecture
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8opg: Virus-like Particle based on PVY coat protein with dC79 deletion with RNA-free helical architecture
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8oph: Head-to-tail double ring assembly from truncated PVY coat protein
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8opi: VHH Z70 mutant 1 in interaction with PHF6 Tau peptide
Classification: IMMUNE SYSTEM
Source organism: Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-04-07
Authors: Dupre, E., Mortelecque, J., NGuyen, M., Hanoulle, X., Landrieu, I.
PDB entry 8opj: Global refinement of cubic assembly from truncated PVY coat protein with K176C mutation
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8opk: Local refinement of cubic assembly from truncated PVY coat protein with K176C mutation
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8opl: Virus-like Particle based on PVY coat protein with T43C and D136C mutation with helical architecture encapsidating ssRNA
Classification: VIRUS LIKE PARTICLE
Source organism: Potato virus Y strain NTN
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2023-04-07
Authors: Kavcic, L., Kezar, A., Podobnik, M.
PDB entry 8opm: Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (closed state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-04-07
Authors: Pronker, M.F., Creutznacher, R., Hurdiss, D.L.
PDB entry 8opn: Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (1-up state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2023-04-07
Authors: Pronker, M.F., Creutznacher, R., Hurdiss, D.L.
PDB entry 8opo: Human Coronavirus HKU1 spike glycoprotein in complex with an alpha2,8-linked 9-O-acetylated disialoside (3-up state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-04-07
Authors: Pronker, M.F., Creutznacher, R., Hurdiss, D.L.