LiteFold/PDB huggingface dataset:
PDB entry 6vwj: Leg region of the closed conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.21 Å
Deposited: 2020-02-19
Authors: Xu, Y., Kirk, N.S., Lawrence, M.C., Croll, T.I.
PDB entry 6vwk: E. coli ATP Synthase ADP Sub-state 3a Fo Focussed
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-02-20
Authors: Stewart, A.G., Walshe, J.L., Sobti, M.
PDB entry 6vwl: 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-02-20
Authors: Loerch, S., Bao, C., Ling, C., Korostelev, A.A., Grigorieff, N., Ermolenko, D.M.
PDB entry 6vwm: 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-02-20
Authors: Loerch, S., Bao, C., Ling, C., Korostelev, A.A., Grigorieff, N., Ermolenko, D.M.
PDB entry 6vwn: 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-02-20
Authors: Loerch, S., Bao, C., Ling, C., Korostelev, A.A., Grigorieff, N., Ermolenko, D.M.
PDB entry 6vwo: Crystal structure of E. coli guanosine kinase
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2020-02-20
Authors: Wang, B., Grant, R.A., Laub, M.T.
PDB entry 6vwp: Crystal structure of E. coli guanosine kinase in complex with ppGpp
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2020-02-20
Authors: Wang, B., Grant, R.A., Laub, M.T.
PDB entry 6vwq: X-ray crystal structure of clavaminate synthase with vanadyl, succinate, and deoxyproclavaminic acid
Classification: OXIDOREDUCTASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-02-20
Authors: Boal, A.K., Vavra, J.
PDB entry 6vwr: X-ray structure of clavaminate synthase with vanadyl, succinate, and deoxyguanidinoproclavaminic acid
Classification: OXIDOREDUCTASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-02-20
Authors: Boal, A.K., Vavra, J.
PDB entry 6vws: Hexamer of Helical HIV capsid by RASTR method
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.08 Å
Deposited: 2020-02-20
Authors: Zhao, H., Iqbal, N., Asturias, F., Kvaratskhelia, M., Vanblerkom, P.
PDB entry 6vwt: Transitional unit cell 1 of adenine riboswitch aptamer crystal phase transition upon ligand binding
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2020-02-20
Authors: Stagno, J.R., Wang, Y.-X.
PDB entry 6vwu: X-ray structure of ALKS 4230, a fusion of circularly permuted human Interleukin-2 and Interleukin-2 Receptor alpha
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2020-02-20
Authors: Losey, H.C.
PDB entry 6vwv: Transitional unit cell 2 of adenine riboswitch aptamer crystal phase transition upon ligand binding
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-02-20
Authors: Stagno, J.R., Wang, Y.-X.
PDB entry 6vww: Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-02-20
Authors: Kim, Y., Jedrzejczak, R., Maltseva, N., Endres, M., Godzik, A., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6vwx: NaChBac in lipid nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Bacillus halodurans C-125
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-02-20
Authors: Yan, N., Gao, S.
PDB entry 6vwy: Crystal structure of C45G/T50C D. vulgaris carbon monoxide dehydrogenase (anaerobic)
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-02-20
Authors: Wittenborn, E.C., Drennan, C.L.
PDB entry 6vwz: Crystal structure of air-exposed C45G/T50C D. vulgaris carbon monoxide dehydrogenase (20 minute air exposure)
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.488 Å
Deposited: 2020-02-20
Authors: Wittenborn, E.C., Drennan, C.L.
PDB entry 6vx0: Crystal structure of air-exposed C45G/T50C D. vulgaris carbon monoxide dehydrogenase (2 hour air exposure)
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2020-02-20
Authors: Wittenborn, E.C., Drennan, C.L.
PDB entry 6vx1: Crystal structure of air-exposed C45G/T50C D. vulgaris carbon monoxide dehydrogenase (2 day air exposure)
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2020-02-20
Authors: Wittenborn, E.C., Drennan, C.L.
PDB entry 6vx2: HIV Integrase core domain in complex with inhibitor (5-methyl-1-benzofuran-3-yl)acetic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-02-21
Authors: Gorman, M.A., Parker, M.W.
PDB entry 6vx3: NaChBac in GDN
Classification: MEMBRANE PROTEIN
Source organism: Bacillus halodurans C-125
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-02-21
Authors: Yan, N., Gao, S.
PDB entry 6vx4: Density-fitted Model Structure of Antibody Variable Domains of TyTx11 in Complex with Typhoid Toxin
Classification: TOXIN
Source organism: Mus musculus; Salmonella enterica subsp. enterica serovar Typhi str. CT18
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2020-02-21
Authors: Nguyen, T., Song, J.
PDB entry 6vx5: bestrophin-2 Ca2+- unbound state (250 nM Ca2+)
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2020-02-21
Authors: Owji, A.P., Zhao, Q., Ji, C., Kittredge, A., Hopiavuori, A., Fu, Z., Ward, N., Clarke, O., Shen, Y., Zhang, Y., Hendrickson, W.A., Yang, T.
PDB entry 6vx6: bestrophin-2 Ca2+-bound state (250 nM Ca2+)
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-02-21
Authors: Owji, A.P., Zhao, Q., Ji, C., Kittredge, A., Hopiavuori, A., Fu, Z., Ward, N., Clarke, O., Shen, Y., Zhang, Y., Hendrickson, W.A., Yang, T.
PDB entry 6vx7: bestrophin-2 Ca2+-bound state (5 mM Ca2+)
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.36 Å
Deposited: 2020-02-21
Authors: Owji, A.P., Zhao, Q., Ji, C., Kittredge, A., Hopiavuori, A., Fu, Z., Ward, N., Clarke, O., Shen, Y., Zhang, Y., Hendrickson, W.A., Yang, T.
PDB entry 6vx8: bestrophin-2 Ca2+- unbound state 2 (EGTA only)
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2020-02-21
Authors: Owji, A.P., Zhao, Q., Ji, C., Kittredge, A., Hopiavuori, A., Fu, Z., Ward, N., Clarke, O., Shen, Y., Zhang, Y., Hendrickson, W.A., Yang, T.
PDB entry 6vx9: bestrophin-2 Ca2+- unbound state 1 (EGTA only)
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.17 Å
Deposited: 2020-02-21
Authors: Owji, A.P., Zhao, Q., Ji, C., Kittredge, A., Hopiavuori, A., Fu, Z., Ward, N., Clarke, O., Shen, Y., Zhang, Y., Hendrickson, W.A., Yang, T.
PDB entry 6vxc: Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile
Classification: LYASE
Source organism: Clostridioides difficile 70-100-2010
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-02-21
Authors: Backman, L.R.F., Drennan, C.L.
PDB entry 6vxe: Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile with substrate trans-4-hydroxy-L-proline bound
Classification: LYASE
Source organism: Clostridioides difficile 70-100-2010
Experimental method: X-RAY DIFFRACTION
Resolution: 2.464 Å
Deposited: 2020-02-21
Authors: Backman, L.R.F., Drennan, C.L.
PDB entry 6vxf: Structure of apo-closed ABCG2
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-02-21
Authors: Orlando, B.J., Maofu, L.
PDB entry 6vxg: Structure of the C-terminal Domain of RAGE and Its Inhibitor
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-02-21
Authors: Ramirez, L., Shekhtman, A.
PDB entry 6vxh: Structure of ABCG2 bound to imatinib
Classification: TRANSLOCASE/TRANSLOCASE INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-02-21
Authors: Orlando, B.J., Liao, M.
PDB entry 6vxi: Structure of ABCG2 bound to mitoxantrone
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-02-21
Authors: Orlando, B.J., Liao, M.
PDB entry 6vxj: Structure of ABCG2 bound to SN38
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-02-22
Authors: Orlando, B.J., Liao, M.
PDB entry 6vxk: Cryo-EM Structure of the full-length A39R/PlexinC1 complex
Classification: MEMBRANE PROTEIN
Source organism: Ectromelia virus (strain Moscow); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-02-22
Authors: Kuo, Y.-C., Chen, H., Shang, G., Uchikawa, E., Tian, H., Bai, X., Zhang, X.
PDB entry 6vxm: Cryo-EM structure of Arabidopsis thaliana MSL1
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2020-02-22
Authors: Deng, Z., Zhang, J., Yuan, P.
PDB entry 6vxn: Cryo-EM structure of Arabidopsis thaliana MSL1 A320V
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2020-02-22
Authors: Deng, Z., Zhang, J., Yuan, P.
PDB entry 6vxo: NaChBac-Nav1.7VSDII chimera in nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Bacillus halodurans C-125; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-02-22
Authors: Yan, N., Gao, S.
PDB entry 6vxp: Cryo-EM structure of Arabidopsis thaliana MSL1 in lipid nanodisc
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2020-02-22
Authors: Deng, Z., Zhang, J., Yuan, P.
PDB entry 6vxq: Bruton's tyrosine kinase in complex with compound 5
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-02-23
Authors: Metrick, C.M., Marcotte, D.J.
PDB entry 6vxr: Structure of Maternal embryonic leucine zipper kinase bound to LDSM276
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-02-24
Authors: Counago, R.M., Takarada, J.E., dos Reis, C.V., Gama, F.H., Azevedo, H., Mascarello, A., Guimaraes, C.R., Structural Genomics Consortium (SGC)
PDB entry 6vxs: Crystal Structure of ADP ribose phosphatase of NSP3 from SARS CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2020-02-24
Authors: Kim, Y., Jedrzejczak, R., Maltseva, N., Endres, M., Mesecar, A., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6vxt: Activated Nitrogenase MoFe-protein from Azotobacter vinelandii
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2020-02-24
Authors: Kang, W., Hu, Y., Ribbe, M.W.
PDB entry 6vxu: Structure of Human Vaccinia-related Kinase 1 (VRK1) bound to ACH471
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-02-24
Authors: dos Reis, C.V., Dutra, L.A., Gama, F.H., Mascarello, A., Azevedo, H., Guimaraes, C.R., Massirer, K.B., Arruda, P., Edwards, A.M., Counago, R.M., Structural Genomics Consortium (SGC)
PDB entry 6vxv: Crystal structure of cyclo-L-Trp-L-Pro-bound cytochrome P450 NasF5053 from Streptomyces sp. NRRL F-5053
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. NRRL F-5053
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-02-24
Authors: Luo, Z., Jia, X., Sun, C., Qu, X., Kobe, B.
PDB entry 6vxw: NMR solution structure of natural scorpion toxin Cl13
Classification: TOXIN
Source organism: Centruroides limpidus
Experimental method: SOLUTION NMR
Deposited: 2020-02-24
Authors: del Rio Portilla, F., Delepierre, M., Lopez Giraldo, A.E.
PDB entry 6vxx: Structure of the SARS-CoV-2 spike glycoprotein (closed state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-02-25
Authors: Walls, A.C., Park, Y.J., Tortorici, M.A., Wall, A., Seattle Structural Genomics Center for Infectious Disease (SSGCID), McGuire, A.T., Veesler, D.
PDB entry 6vxy: Triazole bridged SFTI1 inhibitor in complex with beta-trypsin
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.398 Å
Deposited: 2020-02-25
Authors: White, A.M., King, G.J., Durek, T., Craik, D.J.
PDB entry 6vxz: SthK P300A cyclic nucleotide-gated potassium channel in the closed state, in complex with cAMP
Classification: TRANSPORT PROTEIN
Source organism: Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2020-02-25
Authors: Schmidpeter, P.A.M., Rheinberger, J., Nimigean, C.M.
PDB entry 6vy0: SthK P300A cyclic nucleotide-gated potassium channel in a putative active state, in complex with cAMP
Classification: TRANSPORT PROTEIN
Source organism: Spirochaeta thermophila DSM 6578
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.68 Å
Deposited: 2020-02-25
Authors: Schmidpeter, P.A.M., Rheinberger, J., Nimigean, C.M.
PDB entry 6vy1: Cryo-EM structure of filamentous PFD from Methanocaldococcus jannaschii
Classification: PROTEIN FIBRIL
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2020-02-25
Authors: Wang, F., Chen, Y.X., Ing, N.L., Hochbaum, A.I., Clark, D.S., Glover, D.J., Egelman, E.H.
PDB entry 6vy2: Cryo-EM structure of M1214_N1 Fab in complex with CH505 TF chimeric SOSIP.664 Env trimer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.86 Å
Deposited: 2020-02-25
Authors: Chan, K.-W., Kong, X.P.
PDB entry 6vy4: Crystal structure of Hendra receptor binding protein head domain in complex with human neutralizing antibody HENV-32
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Hendra henipavirus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-02-25
Authors: Dong, J., Crowe, J.E.
PDB entry 6vy5: Crystal structure of Nipah receptor binding protein head domain in complex with human neutralizing antibody HENV-26
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Nipah henipavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2020-02-25
Authors: Dong, J., Crowe, J.E.
PDB entry 6vy6: Crystal structure of Hendra receptor binding protein head domain in complex with human neutralizing antibody HENV-26
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Hendra henipavirus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-02-25
Authors: Dong, J., Crowe, J.E.
PDB entry 6vy7: Structural characterization of novel conotoxin MIIIB derived from Conus magus
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2020-02-25
Authors: Loening, N.M.
PDB entry 6vy8: NMR solution structure of a triazole bridged trypsin inhibitor based on the framework of SFTI-1
Classification: BIOSYNTHETIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2020-02-25
Authors: White, A.M., Harvey, P.J., Durek, T., Craik, D.J.
PDB entry 6vy9: Crystal structure of NotF prenyltransferase
Classification: TRANSFERASE
Source organism: Aspergillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2020-02-25
Authors: Dan, Q., Smith, J.L.
PDB entry 6vya: Crystal structure of NotF in complex with brevianamide F and DMSPP
Classification: TRANSFERASE
Source organism: Aspergillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-02-25
Authors: Dan, Q., Smith, J.L.
PDB entry 6vyb: SARS-CoV-2 spike ectodomain structure (open state)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-02-25
Authors: Walls, A.C., Park, Y.J., Tortorici, M.A., Wall, A., Seattle Structural Genomics Center for Infectious Disease (SSGCID), McGuire, A.T., Veesler, D.
PDB entry 6vyc: Crystal structure of WD-repeat domain of human WDR91
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-02-26
Authors: Halabelian, L., Hutchinson, A., Li, Y., Seitova, A., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Structural Genomics Consortium (SGC)
PDB entry 6vyd: Terpenoid Cyclase FgGS in Complex with Mg, Inorganic Pyrophosphate, and Benzyltriethylammonium cation
Classification: LYASE
Source organism: Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2020-02-26
Authors: Herbst-Gervasoni, C.J., Christianson, D.W.
PDB entry 6vye: 6-phosphogluconolactonase from Trypanosoma cruzi
Classification: HYDROLASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-02-26
Authors: Merritt, E.A., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
PDB entry 6vyf: Cryo-EM structure of Plasmodium vivax hexokinase (Open state)
Classification: TRANSFERASE
Source organism: Plasmodium vivax
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-02-26
Authors: Srivastava, S.S., Darling, J.E., Suryadi, J., Morris, J.C., Drew, M.E., Subramaniam, S.
PDB entry 6vyg: Cryo-EM structure of Plasmodium vivax hexokinase (Closed state)
Classification: TRANSFERASE
Source organism: Plasmodium vivax
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-02-26
Authors: Srivastava, S.S., Darling, J.E., Suryadi, J., Morris, J.C., Drew, M.E., Subramaniam, S.
PDB entry 6vyh: Cryo-EM structure of SLC40/ferroportin in complex with Fab
Classification: MEMBRANE PROTEIN
Source organism: Carlito syrichta; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-02-26
Authors: Shen, J., Ren, Z., Pan, Y., Gao, S., Yan, N., Zhou, M.
PDB entry 6vyi: Cryo-EM structure of human diacylglycerol O-acyltransferase 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-02-26
Authors: Sui, X., Wang, K., Gluchowski, N., Liao, M., Walther, C.T., Farese, V.R.
PDB entry 6vyj: Human UHRF1 TTD domain in complex with a fragment
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2020-02-26
Authors: Campbell, J.C., Chang, L., Young, D.W.
PDB entry 6vyk: Cryo-EM structure of mechanosensitive channel MscS in PC-18:1 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-02-27
Authors: Zhang, Y., Daday, C., Gu, R., Cox, C.D., Martinac, B., Groot, B., Walz, T.
PDB entry 6vyl: Cryo-EM structure of mechanosensitive channel MscS in PC-10 nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-02-27
Authors: Zhang, Y., Daday, C., Gu, R., Cox, C.D., Martinac, B., Groot, B., Walz, T.
PDB entry 6vym: Cryo-EM structure of mechanosensitive channel MscS in PC-18:1 nanodiscs treated with beta-cyclodextran
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-02-27
Authors: Zhang, Y., Daday, C., Gu, R., Cox, C.D., Martinac, B., Groot, B., Walz, T.
PDB entry 6vyn: N-terminal domain of mouse surfactant protein B with bound lipid, wild type
Classification: SURFACTANT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-02-27
Authors: Rapoport, T.A., Bodnar, N.O.
PDB entry 6vyo: Crystal structure of RNA binding domain of nucleocapsid phosphoprotein from SARS coronavirus 2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-02-27
Authors: Chang, C., Michalska, K., Jedrzejczak, R., Maltseva, N., Endres, M., Godzik, A., Kim, Y., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6vyp: Crystal structure of the LSD1/CoREST histone demethylase bound to its nucleosome substrate
Classification: NUCLEAR PROTEIN/DNA
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 4.99 Å
Deposited: 2020-02-27
Authors: Kim, S., Zhu, J., Eek, P., Yennawar, N., Song, T.
PDB entry 6vyq: Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vyr: Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vys: Escherichia coli transcription-translation complex A1 (TTC-A1) containing a 21 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vyt: Escherichia coli transcription-translation complex A2 (TTC-A2) containing a 15 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 14 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Ebright, R.H., Su, M.
PDB entry 6vyu: Escherichia coli transcription-translation complex C2 (TTC-C2) containing a 27 nt long mRNA spacer
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vyv: Human mAbs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the MXR8 receptor binding domain
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Ross river virus (strain T48)
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.33 Å
Deposited: 2020-02-27
Authors: Miller, A.S., Kuhn, R.J.
PDB entry 6vyw: Escherichia coli transcription-translation complex C3 (TTC-C3) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vyx: Escherichia coli transcription-translation complex C4 (TTC-C4) containing mRNA with a 21 nt long spacer, transcription factor NusG, and fMet-tRNAs at P-site and E-site
Classification: Ribosome/transcription/translation
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.9 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vyy: Escherichia coli transcription-translation complex C5 (TTC-C5) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.9 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vyz: Escherichia coli transcription-translation complex C6 (TTC-C6) containing mRNA with a 21 nt long spacer, NusA, and fMet-tRNAs at E-site and P-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.9 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vz0: C-terminal domain of mouse surfactant protein B crystallized at high pH
Classification: SURFACTANT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-02-27
Authors: Rapoport, T.A., Bodnar, N.O.
PDB entry 6vz1: Cryo-EM structure of human diacylglycerol O-acyltransferase 1 complexed with acyl-CoA substrate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-02-27
Authors: Sui, X., Wang, K., Gluchowski, N., Liao, M., Walther, C.T., Farese Jr., V.R.
PDB entry 6vz2: Escherichia coli transcription-translation complex D1 (TTC-D1) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 10 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vz3: Escherichia coli transcription-translation complex D2 (TTC-D2) containing mRNA with a 27 nt long spacer
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.9 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vz4: Cryo-EM structure of Sth1-Arp7-Arp9-Rtt102 bound to the nucleosome in ADP Beryllium Fluoride state
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae (strain ATCC 204508 / S288c); synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-02-27
Authors: Leschziner, A.E., Baker, R.W.
PDB entry 6vz5: Escherichia coli transcription-translation complex D3 (TTC-D3) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.9 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vz6: Methanococcoides burtonii cytochrome b5 domain protein (WP 011499504.1)
Classification: METAL BINDING PROTEIN
Source organism: Methanococcoides burtonii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-02-27
Authors: Teakel, S.L., Forwood, J.K., Aragao, D., Cahill, M.A., Marama, M.
PDB entry 6vz7: Escherichia coli transcription-translation complex C1 (TTC-C1) containing a 27 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2020-02-27
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vz8: Arabidopsis thaliana acetohydroxyacid synthase complex with valine bound
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2020-02-27
Authors: Guddat, L.W., Low, Y.S.
PDB entry 6vz9: Structure of proline utilization A with the FAD covalently modified by L-thiazolidine-2-carboxylate
Classification: OXIDOREDUCTASE
Source organism: Sinorhizobium meliloti (strain SM11)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2020-02-28
Authors: Campbell, A.C., Tanner, J.J.
PDB entry 6vza: Crystal structure of cytochrome P450 NasF5053 Q65I-A86G mutant variant from Streptomyces sp. NRRL F-5053 in the cyclo-L-Trp-L-Pro-bound state
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. NRRL F-5053
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2020-02-28
Authors: Luo, Z., Jia, X., Sun, C., Qu, X., Kobe, B.
PDB entry 6vzb: Crystal structure of cytochrome P450 NasF5053 S284A-V288A mutant variant from Streptomyces sp. NRRL F-5053 in the cyclo-L-Trp-L-Pro-bound state
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. NRRL F-5053
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2020-02-28
Authors: Luo, Z., Jia, X., Sun, C., Qu, X., Kobe, B.
PDB entry 6vzc: Tandem UU:GA mismatch within an RNA helix
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2020-02-28
Authors: Nikonowicz, E.P., Chang, A.T.
PDB entry 6vzd: N-terminal domain of mouse surfactant protein B (K46E/R51E mutant) with bound lipid
Classification: SURFACTANT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2020-02-28
Authors: Rapoport, T.A., Bodnar, N.O.
PDB entry 6vze: C-terminal domain of mouse surfactant protein B crystallized at low pH
Classification: SURFACTANT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-02-28
Authors: Rapoport, T.A., Bodnar, N.O.
PDB entry 6vzf: Crystal Structure of Atg11 Coiled-Coil 3
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2020-02-28
Authors: Margolis, H.K., Ragusa, M.J.
PDB entry 6vzg: Cryo-EM structure of Sth1-Arp7-Arp9-Rtt102
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-02-28
Authors: Leschziner, A.E., Baker, R.W.
PDB entry 6vzh: Structure of Human Vaccinia-related Kinase 1 (VRK1) Bound to LDSM311
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-02-28
Authors: dos Reis, C.V., Dutra, L.A., Gama, F., Ferreira, M., Mascarello, A., Azevedo, H., Guimaraes, C., Massirer, K.B., Arruda, P., Edwards, A.M., Counago, R.M., Structural Genomics Consortium (SGC)
PDB entry 6vzi: Crystal Structure of HIV-1 CAP256 RnS-3mut-2G-SOSIP.664 Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.716 Å
Deposited: 2020-02-28
Authors: Lai, Y.-T., Kwong, P.D.
PDB entry 6vzj: Escherichia coli transcription-translation complex A1 (TTC-A1) containing mRNA with a 15 nt long spacer, fMet-tRNAs at E-site and P-site, and lacking transcription factor NusG
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-02-28
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6vzk: Crystal structure of human CaMKII-alpha (CAMK2A)kinase domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-02-28
Authors: Ozden, C., Stratton, M.M., Garman, S.C.
PDB entry 6vzl: Crystal structure of human PPARgamma ligand binding domain in complex with GW1929
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2020-02-28
Authors: Shang, J., Kojetin, D.J.
PDB entry 6vzm: Crystal structure of human PPARgamma ligand binding domain Y473E mutant in complex with Darglitazone
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-02-28
Authors: Shang, J., Kojetin, D.J.
PDB entry 6vzn: Crystal structure of human PPARgamma ligand binding domain Y473E mutant
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-02-28
Authors: Shang, J., Kojetin, D.J.
PDB entry 6vzo: Crystal structure of human PPARgamma ligand binding domain (Protein delipidated by denature and refold)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2020-02-28
Authors: Shang, J., Kojetin, D.J.
PDB entry 6vzp: HBV wild type capsid
Classification: VIRUS
Source organism: Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-02-28
Authors: Zhao, Z., Wang, J., Zlotnick, A.
PDB entry 6vzq: Engineered TTLL6 mutant bound to alpha-elongation analog
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2020-02-28
Authors: Mahalingan, K.K., Keenen, E.K., Strickland, E.K., Li, Y., Liu, Y., Ball, H.L., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 6vzr: Engineered TTLL6 bound to the initiation analog
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-02-28
Authors: Mahalingan, K.K., Keenen, E.K., Strickland, M., Li, Y., Liu, Y., Ball, H.L., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 6vzs: Engineered TTLL6 mutant bound to gamma-elongation analog
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2020-02-28
Authors: Mahalingan, K.K., Keenen, E.K., Strickland, M., Li, Y., Liu, Y., Ball, H.L., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 6vzt: TTLL6 bound to ATP
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2020-02-28
Authors: Mahalingan, K.K., Keenen, E.K., Strickland, M., Li, Y., Liu, Y., Ball, H.L., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 6vzu: TTLL6 bound to alpha-elongation analog
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-02-28
Authors: Mahalingan, K.K., Keenen, E.K., Strickland, M., Li, Y., Liu, Y., Ball, H.B., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 6vzv: TTLL6 bound to gamma-elongation analog
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2020-02-28
Authors: Mahalingan, K.K., Keenen, E.K., Strickland, M., Li, Y., Liu, Y., Ball, H.L., Tanner, M.E., Tjandra, N., Roll-Mecak, A.
PDB entry 6vzw: TTLL6 bound to the initiation analog
Classification: LIGASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-02-28
Authors: Mahalingan, K.K., Keenen, E.K., Strickland, M., Li, Y., Liu, Y., Ball, H.L., Tanner, T.E., Tjandra, N., Roll-Mecak, A.
PDB entry 6vzx: Structure of a Covalently Captured Collagen Triple Helix using Lysine-Glutamate Pairs
Classification: BIOSYNTHETIC PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2020-02-28
Authors: Miller, M.D., Hulgan, S.A., Xu, W., Kosgei, A.J., Phillips Jr., G.N., Hartgerink, J.D.
PDB entry 6vzy: Crystal structure of SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697 with a diiron(II) central domain cofactor
Classification: OXIDOREDUCTASE
Source organism: Streptomyces achromogenes subsp. streptozoticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2020-02-28
Authors: McBride, M.J., Boal, A.K.
PDB entry 6vzz: Crystal structure of glucokinase from Balamuthia mandrillaris in complex with glucose
Classification: TRANSFERASE
Source organism: Balamuthia mandrillaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2020-02-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6w00: Crystal structure of Fab239 in complex with NPNA2 peptide from circumsporozoite protein
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Streptococcus sp. group G; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.853 Å
Deposited: 2020-02-28
Authors: Pholcharee, T., Oyen, D., Wilson, I.A.
PDB entry 6w01: The 1.9 A Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with a Citrate
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-02-28
Authors: Kim, Y., Jedrzejczak, R., Maltseva, N., Endres, M., Godzik, A., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6w02: Crystal Structure of ADP ribose phosphatase of NSP3 from SARS CoV-2 in the complex with ADP ribose
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-02-28
Authors: Michalska, K., Kim, Y., Jedrzejczak, R., Maltseva, N., Endres, M., Mesecar, A., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6w03: Crystal Structure of HIV-1 BG505 DS-SOSIP.3mut Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.3 Angstrom
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-02-28
Authors: Lai, Y.-T., Kwong, P.D.
PDB entry 6w04: Crystal structure of HAD hydrolase, family IA, variant 3 from Entamoeba histolytica HM-1:IMSS
Classification: HYDROLASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-02-29
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6w05: Crystal structure of Fab356 in complex with NPNA2 peptide from circumsporozoite protein
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.516 Å
Deposited: 2020-02-29
Authors: Pholcharee, T., Oyen, D., Wilson, I.A.
PDB entry 6w06: Bruton's tyrosine kinase in complex with compound 6
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-02-29
Authors: Metrick, C.M., Marcotte, D.J.
PDB entry 6w07: Bruton's tyrosine kinase in complex with compound 1
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2020-02-29
Authors: Metrick, C.M., Marcotte, D.J.
PDB entry 6w08: Crystal Structure of Motility Associated Killing Factor E from Vibrio cholerae
Classification: TOXIN
Source organism: Vibrio cholerae O1 biovar El Tor str. N16961
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-02-29
Authors: Kim, Y., Jedrzejczak, R., Joachimiak, G., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6w09: Human mAbs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the MXR8 receptor binding domain
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Chikungunya virus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.3 Å
Deposited: 2020-02-29
Authors: Miller, A.S., Kuhn, R.J.
PDB entry 6w0a: Open-gate KcsA soaked in 1 mM BaCl2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.237 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0b: Open-gate KcsA soaked in 2 mM BaCl2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.604 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0c: Open-gate KcsA soaked in 4 mM BaCl2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.556 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0d: Open-gate KcsA soaked in 5 mM BaCl2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.639 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0e: Open-gate KcsA soaked in 10 mM BaCl2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.512 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0f: Closed-gate KcsA soaked in 0mM KCl/5mM BaCl2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0g: Closed-gate KcsA soaked in 1mM KCl/5mM BaCl2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0h: Closed-gate KcsA soaked in 5mM KCl/5mM BaCl2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0i: Closed-gate KcsA soaked in 10mM KCl/5mM BaCl2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.328 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0j: Closed-gate KcsA incubated in BaCl2/NaCl
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-02-29
Authors: Rohaim, A., Gong, L., Li, J.
PDB entry 6w0k: HBV D78S mutant capsid
Classification: VIRUS
Source organism: Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2020-03-01
Authors: Zhao, Z., Wang, J., Zlotnick, A.
PDB entry 6w0l: Henipavirus W protein interacts with 14-3-3 to modulate host gene expression
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Pteropus alecto
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-03-01
Authors: Edwards, M., Hoad, M., Tsimbalyuk, S., Menicucci, A., Messaoudi, I., Forwood, J., Basler, C.
PDB entry 6w0m: Human 8-oxoguanine glycosylase crosslinked with oxoG lesion containing DNA
Classification: Lyase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2020-03-02
Authors: Shigdel, U., Verdine, G.
PDB entry 6w0n: Structure of KHK in complex with compound 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2020-03-02
Authors: Jasti, J.
PDB entry 6w0o: Amyloid-beta(1-40) fibril derived from Alzheimer's disease cortical tissue
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY, SOLID-STATE NMR
Resolution: 2.77 Å
Deposited: 2020-03-02
Authors: Ghosh, U., Thurber, K.R., Tycko, R.
PDB entry 6w0p: Putative kojibiose phosphorylase from human microbiome
Classification: LIGASE
Source organism: gut metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2020-03-02
Authors: Dementiev, A., Osipiuk, J., Endres, M., Wakatsuki, S., Hess, M., Joachimiak, A.
PDB entry 6w0q: APE1 endonuclease product complex D148E
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2020-03-02
Authors: Freudenthal, B.D., Whitaker, A.M.
PDB entry 6w0r: Human 8-oxoguanine glycosylase interrogating fully intrahelical undamaged DNA
Classification: Lyase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-03-02
Authors: Shigdel, U., Verdine, G.
PDB entry 6w0s: Crystal structure of substrate free cytochrome P450 NasF5053 from Streptomyces sp. NRRL F-5053
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. NRRL F-5053
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-03-02
Authors: Luo, Z., Jia, X., Sun, C., Qu, X., Kobe, B.
PDB entry 6w0t: Co-crystal structures of CHIKV nsP3 macrodomain with pyrimidone fragments
Classification: VIRAL PROTEIN
Source organism: Chikungunya virus (strain 37997)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-03-02
Authors: Wu, M., Zhang, S.
PDB entry 6w0u: HIV Integrase core domain in complex with inhibitor 2-(2-ethynyl-5-methyl-1-benzofuran-3-yl)acetic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2020-03-02
Authors: Gorman, M.A., Parker, M.W.
PDB entry 6w0v: The Crystal Structure of the Mutant Nuclease Domain of Pyocin S8 with its Cognate Immunity Protein
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.381 Å
Deposited: 2020-03-03
Authors: Turano, H., Gomes, F., Domingos, R.M., Netto, L.E.S.
PDB entry 6w0w: Structure of KHK in complex with compound 3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-03-03
Authors: Jasti, J.