LiteFold/PDB huggingface dataset:
PDB entry 4ww4: Double-heterohexameric rings of full-length Rvb1(ADP)/Rvb2(ADP)
Classification: HYDROLASE
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2014-11-10
Authors: Lakomek, K., Hopfner, K.-P.
PDB entry 4ww5: Crystal structure of binary complex Bud32-Cgi121 in complex with AMPP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.997 Å
Deposited: 2014-11-10
Authors: Zhang, W.
PDB entry 4ww6: Crystal structure of human carbonic anhydrase isozyme II with 2,3,5,6-Tetrafluoro-4-(propylthio)benzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2014-11-10
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 4ww7: Crystal structure of binary complex Bud32-Cgi121 in complex with AMP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.669 Å
Deposited: 2014-11-10
Authors: Zhang, W., van Tilbeurgh, H.
PDB entry 4ww8: Crystal structure of human carbonic anhydrase isozyme XII with 4-Propylthiobenzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2014-11-10
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 4ww9: Crystal structure of binary complex Bud32-Cgi121 in complex with ADP
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.951 Å
Deposited: 2014-11-10
Authors: Zhang, W., Van Tilbeurgh, H.
PDB entry 4wwa: Crystal structure of binary complex Bud32-Cgi121
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.953 Å
Deposited: 2014-11-10
Authors: Zhang, W., van Tilbeurgh, H.
PDB entry 4wwb: High-resolution structure of the Ni-bound form of the Y135F mutant of C. metallidurans CnrXs
Classification: METAL BINDING PROTEIN
Source organism: Ralstonia metallidurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2014-11-10
Authors: Volbeda, A., Coves, J., Maillard, A.P., Kuennemann, S., Grosse, C., Schleuder, G., Petit-Haertlein, I., de Rosny, E., Nies, D.H.
PDB entry 4wwc: Crystal structure of full length YvoA in complex with palindromic operator DNA
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.903 Å
Deposited: 2014-11-10
Authors: Grau, F.C., Fillenberg, S.B., Muller, Y.A.
PDB entry 4wwd: High-resolution structure of the Co-bound form of the Y135F mutant of C. metallidurans CnrXs
Classification: METAL BINDING PROTEIN
Source organism: Ralstonia metallidurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2014-11-10
Authors: Volbeda, A., Coves, J., Maillard, A.P., Kuennemann, S., Grosse, C., Schleuder, G., Petit-Haertlein, I., de Rosny, E., Nies, D.H.
PDB entry 4wwf: High-resolution structure of two Ni-bound forms of the M123C mutant of C. metallidurans CnrXs
Classification: METAL BINDING PROTEIN
Source organism: Ralstonia metallidurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2014-11-10
Authors: Volbeda, A., Coves, J., Maillard, A.P., Kinnemann, S., Grosse, C., Schleuder, G., Petit-Hurtlein, I., de Rosny, E., Nies, D.H.
PDB entry 4wwh: CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM MYCOBACTERIUM SMEGMATIS (MSMEG_1704, TARGET EFI-510967) WITH BOUND D-GALACTOSE
Classification: TRANSPORT PROTEIN
Source organism: Mycobacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2014-11-11
Authors: Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4wwi: Crystal structure of the C domain of staphylococcal protein A in complex with the Fc fragment of human IgG at 2.3 Angstrom resolution
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.307 Å
Deposited: 2014-11-11
Authors: Deis, L.N., Oas, T.G.
PDB entry 4wwj: UndA, an oxygen-activating, non-heme iron dependent desaturase/decarboxylase
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas protegens Pf-5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-11-11
Authors: Li, X., Cate, J.D.H.
PDB entry 4wwk: Crystal structure of human TCR Alpha Chain-TRAV12-3, Beta Chain-TRBV6-5, Antigen-presenting molecule CD1d, and Beta-2-microglobulin
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2014-11-11
Authors: Le Nours, J., Praveena, T., Pellicci, D.G., Gherardin, N.A., Lim, R.T., Besra, G., Keshipeddy, A., Richardson, S.K., Howell, A.R., Gras, S., Godfrey, D.I., Rossjohn, J., Uldrich, A.P.
PDB entry 4wwl: E. coli 5'-nucleotidase mutant I521C labeled with MTSL (intermediate form)
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2014-11-11
Authors: Krug, U., Paithankar, K.S., Schultz-Heienbrok, R., Strater, N.
PDB entry 4wwm: X-ray crystal structure of Sulfolobus solfataricus Urm1
Classification: SIGNALING PROTEIN
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-11-11
Authors: Bray, S.M., Anjum, S.R., Blackwood, J.K., Kilkenny, M.L., Coelho, M.A., Foster, B.M., Pellegrini, L., Robinson, N.P.
PDB entry 4wwn: Crystal structure of human PI3K-gamma in complex with (S)-N-(1-(7-fluoro-2-(pyridin-2-yl)quinolin-3-yl)ethyl)-9H-purin-6-amine AMG319 inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-11-11
Authors: Whittington, D.A., Tang, J., Yakowec, P.
PDB entry 4wwo: Crystal structure of human PI3K-gamma in complex with phenylquinoline inhibitor N-{(1S)-1-[8-chloro-2-(3-fluorophenyl)quinolin-3-yl]ethyl}-9H-purin-6-amine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-11-11
Authors: Whittington, D.A., Tang, J., Yakowec, P.
PDB entry 4wwp: Crystal structure of human PI3K-gamma in complex with pyridinylquinoline inhibitor N-{(1S)-1-[8-chloro-2-(2-methylpyridin-3-yl)quinolin-3-yl]ethyl}-9H-purin-6-amine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-11-11
Authors: Whittington, D.A., Tang, J., Yakowec, P.
PDB entry 4wwq: Apo structure of the Grb7 SH2 domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-11-12
Authors: Watson, G.M., Ambaye, N.D., Wilce, M.C., Wilce, J.A.
PDB entry 4wwr: Crystal Structure of Bag6-Ubl4A Dimerization Domain
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-11-12
Authors: Mock, J.Y., Chartron, J.W., Clemons Jr., W.M.
PDB entry 4wws: Structure of Chlorite dismutase-like Protein from Listeria monocytogenes
Classification: OXIDOREDUCTASE
Source organism: Listeria monocytogenes serovar 1/2a
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-11-12
Authors: Hagmueller, A., Mlynek, G., Djinovic-Carugo, K.
PDB entry 4wwu: Structure of Mex67:Mtr2
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.301 Å
Deposited: 2014-11-12
Authors: Aibara, S., Valkov, E., Stewart, M.
PDB entry 4wwv: Aminopeptidase APDkam598 from the archaeon Desulfurococcus kamchatkensis
Classification: HYDROLASE
Source organism: Desulfurococcus kamchatkensis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.006 Å
Deposited: 2014-11-12
Authors: Petrova, T., Boyko, K.M., Rakitina, T.V., Korzhenevskiy, D.A., Gorbacheva, M.A., Popov, V.O.
PDB entry 4www: Crystal structure of the E. coli ribosome bound to CEM-101
Classification: Ribosome/antibiotic
Source organism: Escherichia coli; Escherichia coli str. K-12 substr. MG1655
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2014-11-12
Authors: Dunkle, J.A., Zhang, W., Cate, J.H.D., Mankin, A.S.
PDB entry 4wwx: Crystal structure of the core RAG1/2 recombinase
Classification: Hydrolase, Ligase
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2001 Å
Deposited: 2014-11-12
Authors: Kim, M.S., Lapkouski, M., Yang, W., Gellert, M.
PDB entry 4wwy: human cationic trypsin G193R mutant in complex with bovine pancreatic trypsin inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-11-12
Authors: Alloy, A., Kayode, O., Soares, A.S., Wang, R., Radisky, E.S.
PDB entry 4wwz: UndA complexed with 2,3-dodecenoic acid
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas protegens Pf-5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-11-13
Authors: Li, X., Cate, J.D.H.
PDB entry 4wx0: UndA complexed with beta-hydroxydodecanoic acid
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas protegens Pf-5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-11-13
Authors: Li, X., Cate, J.D.H.
PDB entry 4wx1: Structure of Aspergillus fumigatus UDP-Galactopyranose mutase mutant F66A determined from a crystal soaked with UDP-Galactopyranose
Classification: ISOMERASE
Source organism: Neosartorya fumigata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-11-13
Authors: Qureshi, I.A., Chaudhary, R.
PDB entry 4wx2: Crystal structure of Tryptophan Synthase from Salmonella typhimurium in complex with two F6F molecules in the alpha-site and one F6F molecule in the beta-site
Classification: TRANSFERASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-11-13
Authors: Hilario, E., Caulkins, B.G., Young, R.P., Niks, D., Dunn, M.F., Mueller, L.J., Fan, L.
PDB entry 4wx3: pore-forming thermostable direct hemolysin from Grimontia hollisae
Classification: TOXIN
Source organism: Grimontia hollisae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2014-11-13
Authors: Wang, Y.-K., Wu, T.-K., Li, T.-H.T.
PDB entry 4wx4: Crystal structure of adenovirus 8 protease in complex with a nitrile inhibitor
Classification: HYDROLASE
Source organism: Human adenovirus D serotype 8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2014-11-13
Authors: Grosche, P., Sirockin, F., Mac Sweeney, A., Ramage, P., Erbel, P., Melkko, S., Bernardi, A., Hughes, N., Ellis, D., Combrink, K., Jarousse, N., Altmann, E.
PDB entry 4wx5: pore-forming thermostable direct hemolysin from Grimontia hollisae
Classification: TOXIN
Source organism: Grimontia hollisae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.302 Å
Deposited: 2014-11-13
Authors: Wang, Y.-K., Wu, T.-K., Li, T.-H.T.
PDB entry 4wx6: Crystal structure of human adenovirus 8 protease with an irreversible vinyl sulfone inhibitor
Classification: HYDROLASE
Source organism: Human adenovirus D serotype 8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2014-11-13
Authors: Grosche, P., Sirockin, F., Mac Sweeney, A., Ramage, P., Erbel, P., Melkko, S., Bernardi, A., Hughes, N., Ellis, D., Combrink, K., Jarousse, N., Altmann, E.
PDB entry 4wx7: Crystal structure of adenovirus 8 protease with a nitrile inhibitor
Classification: HYDROLASE
Source organism: Human adenovirus D serotype 8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-11-13
Authors: Grosche, P., Sirockin, F., Mac Sweeney, A., Ramage, P., Erbel, P., Melkko, S., Bernardi, A., Hughes, N., Ellis, D., Combrink, K., Jarousse, N., Altmann, E.
PDB entry 4wx8: Crystal structure of binary complex Gon7-Pcc1
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2014-11-13
Authors: Zhang, W., Van Tilbeurgh, H.
PDB entry 4wx9: Crystal structure of Mycobacterium tuberculosis OGT in complex with DNA
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2014-11-13
Authors: Miggiano, R., Rossi, F., Garavaglia, S., Rizzi, M.
PDB entry 4wxa: Crystal structure of binary complex Gon7-Pcc1
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2014-11-13
Authors: Zhang, W., van Tilbeurgh, H.
PDB entry 4wxb: Crystal Structure of Serine Hydroxymethyltransferase from Streptococcus thermophilus
Classification: TRANSFERASE
Source organism: Streptococcus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-11-13
Authors: Hernandez, K., Zelen, I., Petrillo, G., Uson, I., Wandtke, C., Bujons, J., Joglar, J., Parella, T., Clapes, P.
PDB entry 4wxc: Crystal structure of Mycobacterium tuberculosis OGT-Y139F
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-11-13
Authors: Miggiano, R., Rossi, F., Garavaglia, S., Rizzi, M.
PDB entry 4wxd: Crystal structure of Mycobacterium tuberculosis OGT-R37K
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-11-13
Authors: Miggiano, R., Rossi, F., Garavaglia, S., Rizzi, M.
PDB entry 4wxe: CRYSTAL STRUCTURE OF A LACI REGULATOR FROM LACTOBACILLUS CASEI (LSEI_2103, TARGET EFI-512911) WITH BOUND TRIS
Classification: TRANSCRIPTION
Source organism: Lactobacillus casei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-11-13
Authors: Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4wxf: Crystal structure of L-Serine Hydroxymethyltransferase in complex with glycine
Classification: TRANSFERASE
Source organism: Streptococcus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-11-13
Authors: Hernandez, K., Zelen, I., Petrillo, G., Uson, I., Wadtke, C., Bujons, J., Joglar, J., Parella, T., Clapes, P.
PDB entry 4wxg: Crystal structure of L-Serine Hydroxymethyltransferase in complex with a mixture of L-Threonine and Glycine
Classification: TRANSFERASE
Source organism: Streptococcus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-11-13
Authors: Hernandez, K., Zelen, I., Petrillo, G., Uson, I., Wandtke, C., Bujons, J., Joglar, J., Parella, T., Clapes, P.
PDB entry 4wxh: Carminomycin-4-O-methyltransferase (DnrK) variant (298Ser insert) in complex with S-adenosyl-L-homocysteine (SAH) and aclacinomycin T
Classification: TRANSFERASE
Source organism: Streptomyces peucetius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-11-13
Authors: Metsa-Ketela, M., Niiranen, L.
PDB entry 4wxi: FACTOR XIA IN COMPLEX WITH THE INHIBITOR trans-N-{(1S)-1-[4-(3-amino-2H-indazol-6-yl)pyridin-2-yl]-2-phenylethyl}-4-(aminomethyl)cyclohexanecarboxamide
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-11-13
Authors: Wei, A.
PDB entry 4wxj: Drosophila muscle GluRIIB complex with glutamate
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2014-11-13
Authors: Dharkar, P., Mayer, M.L.
PDB entry 4wxk: Crystal structure of a peptide deformylase from Haemophilus influenzae
Classification: HYDROLASE
Source organism: Haemophilus influenzae 86-028NP
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-11-14
Authors: Kishor, C., Addlagatta, A.
PDB entry 4wxl: Crystal structure of a peptide deformylase from Haemophilus influenzae complex with Actinonin
Classification: HYDROLASE
Source organism: Haemophilus influenzae 86-028NP
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2014-11-14
Authors: Kishor, C., Addlagatta, A.
PDB entry 4wxm: FleQ REC domain from Pseudomonas aeruginosa PAO1
Classification: TRANSCRIPTION REGULATOR
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-11-14
Authors: Su, T., Liu, S., Gu, L.
PDB entry 4wxo: SadC (300-487) from Pseudomonas aeruginosa PAO1
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.805 Å
Deposited: 2014-11-14
Authors: Liu, C., Liu, S., Gu, L.
PDB entry 4wxp: X-ray crystal structure of NS3 Helicase from HCV with a bound fragment inhibitor at 2.08 A resolution
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2014-11-14
Authors: Davies, D.R.
PDB entry 4wxq: Crystal Structure of the Myocilin Olfactomedin Domain
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2014-11-14
Authors: Orwig, S.D., Turnage, K.C., Donegan, R.K., Lieberman, R.L.
PDB entry 4wxr: X-ray crystal structure of NS3 Helicase from HCV with a bound inhibitor at 2.42 A resolution
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2014-11-14
Authors: Davies, D.R., Kim, H., Lorimer, D.
PDB entry 4wxs: Crystal Structure of the E396D SNP Variant of the Myocilin Olfactomedin Domain
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-11-14
Authors: Donegan, R.K., Freeman, D.M., Lieberman, R.L.
PDB entry 4wxt: X-ray crystal structure of thioredoxin from Mycobacterium avium
Classification: HYDROLASE
Source organism: Mycobacterium avium subsp. hominissuis 3388
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2014-11-14
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4wxu: Crystal Structure of the Selenomthionine Incorporated Myocilin Olfactomedin Domain E396D Variant.
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.092 Å
Deposited: 2014-11-14
Authors: Donegan, R.K., Freeman, D.M., Lieberman, R.L.
PDB entry 4wxv: Human cationic trypsin K97D mutant in complex with bovine pancreatic trypsin inhibitor (BPTI)
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-11-14
Authors: Alloy, A., Kayode, O., Soares, A.S., Wang, R., Radisky, E.S.
PDB entry 4wxw: SadC (323-487) from Pseudomonas aeruginosa PAO1
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-11-14
Authors: Liu, C., Liu, S., Gu, L.
PDB entry 4wxx: The crystal structure of human DNMT1(351-1600)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.622 Å
Deposited: 2014-11-14
Authors: Zhang, Z.M., Song, J.
PDB entry 4wxy: PLPS (inactive glutaminase mutant) co-crystallized with glutamine and R5P.
Classification: TRANSFERASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-11-14
Authors: Smith, J.L., Smith, A.M.
PDB entry 4wxz: PdxS (G. stearothermophilus) co-crystallized with R5P
Classification: TRANSFERASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-11-14
Authors: Smith, J.L., Smith, A.M.
PDB entry 4wy0: PdxS (G. stearothermophilus) co-crystallized with R5P in the presence of ammonia.
Classification: LYASE
Source organism: Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-11-14
Authors: Smith, J.L., Smith, A.M.
PDB entry 4wy1: Crystal structure of human BACE-1 bound to Compound 24B
Classification: Hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2014-11-14
Authors: Vajdos, F.F., Parris, K.
PDB entry 4wy2: Crystal structure of universal stress protein E from Proteus mirabilis in complex with UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-N-acetyl-alpha-glucosamine
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-11-15
Authors: Shumilin, I.A., Shabalin, I.G., Handing, K.B., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 4wy3: Structure of SARS-3CL protease complex with a phenylbenzoyl (R,S)-N-decalin type inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: SARS coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2014-11-15
Authors: Akaji, K., Teruya, K., Shimamoto, Y., Sanjho, A., Yamashita, E., Nakagawa, A.
PDB entry 4wy4: Crystal structure of autophagic SNARE complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2014-11-15
Authors: Zhao, M., Brunger, A.T.
PDB entry 4wy5: Structural analysis of two fungal esterases from Rhizomucor miehei explaining their substrate specificity
Classification: HYDROLASE
Source organism: Rhizomucor miehei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2014-11-15
Authors: Qin, Z., Yang, S., Duan, X., Yan, Q., Jiang, Z.
PDB entry 4wy6: Crystal structure of human BACE-1 bound to Compound 36
Classification: Hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-11-15
Authors: Vajdos, F.F.
PDB entry 4wy7: Crystal structure of recombinant 4E10 expressed in Escherichia coli with epitope bound
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-11-16
Authors: Rujas, E., Morante, K., Tsumoto, K., Nieva, J.L., Caaveiro, J.M.M.
PDB entry 4wy8: Structural analysis of two fungal esterases from Rhizomucor miehei explaining their substrate specificity
Classification: HYDROLASE
Source organism: Rhizomucor miehei CAU432
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2014-11-16
Authors: Qin, Z., Yang, S., Duan, X., Yan, Q., Jiang, Z.
PDB entry 4wy9: Crystal structure of the periplasmic sensory domain of the Campylobacter jejuni chemoreceptor Tlp1
Classification: SIGNALING PROTEIN
Source organism: Campylobacter jejuni subsp. jejuni serotype O:2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2014-11-17
Authors: Roujeinikova, A., Machuca, M.A., Liu, Y.C.
PDB entry 4wya: Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with a fragment hit
Classification: transferase/transferase inhibitor
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-11-17
Authors: Finzel, B.C., Dai, D., Geders, T.W.
PDB entry 4wyb: Structure of the Bud6 flank domain in complex with actin
Classification: CONTRACTILE PROTEIN/PROTEIN BINDING
Source organism: Oryctolagus cuniculus; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.493 Å
Deposited: 2014-11-17
Authors: Eck, M.J., Park, E., Zheng, W.
PDB entry 4wyc: Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with a thiazole benzamide inhibitor
Classification: transferase/transferase inhibitor
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-11-17
Authors: Finzel, B.C., Dai, R., Geders, T.W.
PDB entry 4wyd: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase from Mycobacterium tuberculosis complexed with a fragment from DSF screening
Classification: transferase/transferase inhibitor
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2014-11-17
Authors: Dai, R., Finzel, B.C., Geders, T.W.
PDB entry 4wye: Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis complexed with a DSF fragment hit
Classification: transferase/transferase inhibitor
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-11-17
Authors: Dai, R., Finzel, B.C.
PDB entry 4wyf: Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with a DSF fragment hit
Classification: transferase/transferase inhibitor
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2014-11-17
Authors: Barry, C.F., Dai, R.
PDB entry 4wyg: Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis complexed with a fragment hit
Classification: transferase/transferase inhibitor
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2014-11-17
Authors: Dai, R., Finzel, B.C.
PDB entry 4wyh: Crystal structure of PriX from the hyperthermophilic archaeon Sulfolobus solfataricus
Classification: REPLICATION
Source organism: Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-11-17
Authors: Ouyang, S.
PDB entry 4wyi: The crystal structure of Arabidopsis thaliana galactolipid synthase, MGD1 (apo-form)
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-11-17
Authors: Rocha, J., Breton, C.
PDB entry 4wyj: Adenovirus 3 head domain mutant V239D
Classification: VIRAL PROTEIN
Source organism: Human adenovirus B serotype 3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2014-11-17
Authors: Lieber, A., Zubieta, C., Fender, P.
PDB entry 4wyk: Structure of the LRR and NTF2-like domains of NXF1 complexed with NXT1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2014-11-17
Authors: Aibara, S., Valkov, E., Stewart, M.
PDB entry 4wyl: Mutant K18E of 3D polymerase from Foot-and-Moth Disease Virus
Classification: TRANSFERASE
Source organism: Foot-and-mouth disease virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-11-17
Authors: Ferrer-Orta, C., Verdaguer, N., de la Higuera, I., Domingo, E.
PDB entry 4wym: Structural basis of HIV-1 capsid recognition by CPSF6
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-11-17
Authors: Battacharya, A., Taylor, A.B., Hart, P.J., Ivanov, D.N.
PDB entry 4wyn: The crystal structure of the A109G mutant of RNase A
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.805 Å
Deposited: 2014-11-17
Authors: French, R.L., Gagne, D., Doucet, N., Simonovic, M.
PDB entry 4wyo: Crystal structure of human-yeast chimera acetyl coA carboxylase CT domain bound to Compound 1
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2014-11-17
Authors: Vajdos, F.F.
PDB entry 4wyp: The crystal structure of the A109G mutant of RNase A in complex with 5'AMP
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.502 Å
Deposited: 2014-11-17
Authors: French, R.L., Gagne, D., Doucet, N., Simonovic, M.
PDB entry 4wyq: Crystal structure of the Dicer-TRBP interface
Classification: HYDROLASE/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2014-11-18
Authors: Wilson, R.C., Doudna, J.A.
PDB entry 4wyr: Crystal structure of thiolase mutation (V77Q,N153Y,A286K) from Clostridium acetobutylicum
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-11-18
Authors: Kim, S., Ha, S.C., Ahn, J.W., Kim, E.J., Lim, J.H., Kim, K.J.
PDB entry 4wys: Crystal structure of thiolase from Escherichia coli
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-11-18
Authors: Kim, S., Ha, S.C., Ahn, J.W., Kim, E.J., Lim, J.H., Kim, K.J.
PDB entry 4wyt: Crystal Structure of Scribble PDZ34 tandem at 2.6 Angstroms
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-11-18
Authors: Ren, J.Q., Feng, W.
PDB entry 4wyu: Crystal Structure of Scribble PDZ34 tandem in complex with its target peptide
Classification: STRUCTURAL PROTEIN/PEPTIDE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-11-18
Authors: Ren, J.Q., Pei, H.H., Feng, W.
PDB entry 4wyv: Crystal Structure of Human Translin in Open Conformation
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2014-11-18
Authors: Dvir, H., Eliahoo, E., Alian, A.
PDB entry 4wyw: Mutant K20E of 3D polymerase from Foot-and-Mouth Disease Virus
Classification: TRANSFERASE
Source organism: Foot-and-mouth disease virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-11-18
Authors: Ferrer-Orta, C., Verdaguer, N., de la Higuera, I., Domingo, E.
PDB entry 4wyy: Crystal Structure of P. aeruginosa AmpC
Classification: hydrolase/hydrolase inhibitor
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2014-11-18
Authors: Ferguson, A.D.
PDB entry 4wyz: The crystal structure of the A109G mutant of RNase A in complex with 3'UMP
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.449 Å
Deposited: 2014-11-18
Authors: French, R.L., Gagne, D., Doucet, N., Simonovic, M.
PDB entry 4wz0: Crystal structure of U-box 1 of LubX / LegU2 / Lpp2887 from Legionella pneumophila str. Paris
Classification: LIGASE
Source organism: Legionella pneumophila (strain Paris)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.954 Å
Deposited: 2014-11-18
Authors: Stogios, P.J., Quaile, A.T., Skarina, T., Stein, A., Di Leo, R., Yim, V., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4wz2: Crystal structure of U-box 2 of LubX / LegU2 / Lpp2887 from Legionella pneumophila str. Paris, Ile175Met mutant
Classification: LIGASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 3.408 Å
Deposited: 2014-11-18
Authors: Stogios, P.J., Qualie, A.T., Skarina, T., Nocek, B., Di Leo, R., Yim, V., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4wz3: Crystal structure of the complex between LubX/LegU2/Lpp2887 U-box 1 and Homo sapiens UBE2D2
Classification: LIGASE
Source organism: Homo sapiens; Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-11-18
Authors: Stogios, P.J., Quaile, A.T., Skarina, T., Nocek, B., Di Leo, R., Yim, V., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4wz4: Crystal structure of P. aeruginosa AmpC
Classification: hydrolase/hydrolase inhibitor
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2014-11-18
Authors: Ferguson, A.D.
PDB entry 4wz5: Crystal structure of P. aeruginosa OXA10
Classification: hydrolase/hydrolase inhibitor
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-11-18
Authors: Ferguson, A.D.
PDB entry 4wz6: Human CFTR aa389-678 (NBD1), deltaF508 with three solubilizing mutations, bound ATP
Classification: ATP binding Protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-11-18
Authors: Byrnes, L.J., Hall, J.
PDB entry 4wz7: Crystal structure of mitochondrial NADH:ubiquinone oxidoreductase from Yarrowia lipolytica.
Classification: OXIDOREDUCTASE
Source organism: Yarrowia lipolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2014-11-18
Authors: Wirth, C., Zickermann, V., Brandt, U., Hunte, C.
PDB entry 4wz8: Crystal structure of human-yeast chimera acetyl coA carboxylase CT domain bound to Compound 6
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2014-11-18
Authors: Vajdos, F.F.
PDB entry 4wz9: APN1 from Anopheles gambiae
Classification: HYDROLASE
Source organism: Anopheles gambiae; Drosophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2014-11-19
Authors: Atkinson, S.C., Armistead, J.S., Mathias, D.K., Sandeu, M.M., Tao, D., Borhani-Dizaji, N., Morlais, I., Dinglasan, R.R., Borg, N.A.
PDB entry 4wza: Asymmetric Nucleotide Binding in the Nitrogenase Complex
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8995 Å
Deposited: 2014-11-19
Authors: Tezcan, F.A., Kaiser, J.T., Howard, J.B., Rees, D.C.
PDB entry 4wzb: Crystal Structure of MgAMPPCP-bound Av2-Av1 complex
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-11-19
Authors: Tezcan, F.A., Kaiser, J.T., Mustafi, D., Walton, M.Y., Howard, J.B., Rees, D.C.
PDB entry 4wzc: Understanding Extradiol Dioxygenase Mechanism in NAD+ Biosynthesis by Viewing Catalytic Intermediates - 2,3-cis-4,5-trans ACMS bound to I142A mutant HAO
Classification: OXIDOREDUCTASE
Source organism: Ralstonia metallidurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.842 Å
Deposited: 2014-11-19
Authors: Liu, F., Liu, A.
PDB entry 4wzd: Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2014-11-19
Authors: Rozov, A., Demeshkina, N., Yusupov, M., Yusupova, G.
PDB entry 4wze: Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type Ley (tetraglycan)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII-4/Saga4/2006/JP
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2014-11-19
Authors: Singh, B.K., Hansman, G.S.
PDB entry 4wzf: Crystal structural basis for Rv0315, an immunostimulatory antigen and pseudo beta-1, 3-glucanase of Mycobacterium tuberculosis
Classification: HYDROLASE ACTIVATOR
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.699 Å
Deposited: 2014-11-19
Authors: Dong, W.Y., Fu, Z.F., Peng, G.Q.
PDB entry 4wzg: Structure of human ATG101
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-11-19
Authors: Michel, M., Weiergraeber, O.H.
PDB entry 4wzh: Dihydroorotate dehydrogenase from Leishmania Viannia braziliensis
Classification: OXIDOREDUCTASE
Source organism: Leishmania braziliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2014-11-19
Authors: Reis, R.A.G., Lorenzato, E., Silva, V.C., Nonato, M.C.
PDB entry 4wzi: Crystal structure of crosslink stabilized long-form PDE4B
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2014-11-19
Authors: Cedervall, P., Pandit, J.
PDB entry 4wzj: Spliceosomal U4 snRNP core domain
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2014-11-19
Authors: Leung, A.K.W., Nagai, K., Li, J.
PDB entry 4wzk: Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type H2 (triglycan)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII-4/Saga4/2006/JP
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2014-11-20
Authors: Singh, B.K., Hansman, G.S.
PDB entry 4wzl: Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type Lea (triglycan)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII-4/Saga4/2006/JP
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-11-20
Authors: Singh, B.K., Hansman, G.S.
PDB entry 4wzm: Mutant K18E of RNA dependent RNA polymerase from Foot-and-Mouth Disease Virus complexed with RNA
Classification: TRANSFERASE
Source organism: Foot-and-mouth disease virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2014-11-20
Authors: Verdaguer, N., Ferrer-Orta, C., de la Higuera, N.
PDB entry 4wzn: CRYSTAL STRUCTURE OF THE 2B PROTEIN SOLUBLE DOMAIN FROM HEPATITIS A VIRUS
Classification: VIRAL PROTEIN
Source organism: Human hepatitis A virus genotype IB (isolate HM175)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-11-20
Authors: Garriga, D., Vives-Adrian, L., Buxaderas, M., Ferreira-da-Silva, F., Almeida, B., Macedo-Ribeiro, S., Pereira, P.J., Verdaguer, N.
PDB entry 4wzo: Complex of 70S ribosome with tRNA-fMet and mRNA
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2014-11-20
Authors: Rozov, A., Demeshkina, N., Yusupov, M., Yusupova, G.
PDB entry 4wzp: Ser65 phosphorylated ubiquitin, major conformation
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-11-20
Authors: Wauer, T., Wagstaff, J., Freund, S.M.V., Komander, D.
PDB entry 4wzq: Mutant K20E of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with RNA
Classification: TRANSFERASE
Source organism: Foot-and-mouth disease virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-11-20
Authors: Verdaguer, N., Ferrer-Orta, C.
PDB entry 4wzr: Crystal structure of human Puf-A
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.154 Å
Deposited: 2014-11-20
Authors: Qiu, C., Hall, T.M.T.
PDB entry 4wzs: Crystal structure of the Mot1 N-terminal domain in complex with TBP and NC2 bound to a promoter DNA fragment
Classification: TRANSCRIPTION
Source organism: Encephalitozoon cuniculi; Encephalitozoon cuniculi (strain GB-M1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.78 Å
Deposited: 2014-11-20
Authors: Butryn, A., Hopfner, K.-P.
PDB entry 4wzt: Crystal structure of P domain from norovirus strain NSW0514 in complex with HBGA type A (triglycan)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2014-11-20
Authors: Singh, B.K., Hansman, G.S.
PDB entry 4wzu: Crystal structure of beta-ketoacyl-(acyl carrier protein) synthase III-2 (FabH2) from Vibrio cholerae
Classification: TRANSFERASE
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2014-11-20
Authors: Hou, J., Chruszcz, M., Zheng, H., Cooper, D.R., Chordia, M.D., Zimmerman, M.D., Anderson, W.F., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4wzv: Crystal structure of a hydroxamate based inhibitor EN140 in complex with the MMP-9 catalytic domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2014-11-20
Authors: Stura, E.A., Vera, L., Cassar-Lajeunesse, E., Nuti, E., Dive, V., Rossello, A.
PDB entry 4wzw: Crystal structure of human Puf-A in complex with DNA
Classification: DNA Binding Protein, RNA Binding Protein/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9516 Å
Deposited: 2014-11-20
Authors: Qiu, C., Hall, T.M.T.
PDB entry 4wzx: ULK3 regulates cytokinetic abscission by phosphorylating ESCRT-III proteins
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3859 Å
Deposited: 2014-11-20
Authors: Caballe, A., Wenzel, D.M., Agromayor, M., Alam, S.L., Skalicky, J.J., Kloc, M., Carlton, J.G., Labrador, L., Sundquist, W.I., Martin-Serrano, J.
PDB entry 4wzy: Structure of mycobacterial maltokinase, the missing link in the essential GlgE-pathway (ATP complex)
Classification: TRANSFERASE
Source organism: Mycobacterium vanbaalenii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2014-11-20
Authors: Fraga, J., Empadinhas, N., Pereira, P.J.B., Macedo-Ribeiro, S.
PDB entry 4wzz: CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTAS (Cphy_0583, TARGET EFI-511148) WITH BOUND L-RHAMNOSE
Classification: TRANSPORT PROTEIN
Source organism: Clostridium phytofermentans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-11-20
Authors: Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4x00: X-ray crystal structure of a putative aryl esterase from Burkholderia cenocepacia
Classification: HYDROLASE
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2014-11-20
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4x01: S. pombe Ctp1 tetramerization domain
Classification: DNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.201 Å
Deposited: 2014-11-20
Authors: Andres, S.N., Williams, R.S.
PDB entry 4x04: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate
Classification: SOLUTE BINDING PROTEIN
Source organism: Citrobacter koseri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-11-20
Authors: Yadava, U., Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4x05: Crystal structure of P domain from norovirus strain Farmington Hills 2004 in complex with HBGA type B (triglycan)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII.4/Farmington Hills/2004/USA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2014-11-20
Authors: Singh, B.K., Leuthold, M., Hansman, G.S.
PDB entry 4x06: Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type B (triglycan)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII-4/Saga4/2006/JP
Experimental method: X-RAY DIFFRACTION
Resolution: 1.218 Å
Deposited: 2014-11-20
Authors: Singh, B.K., Hansman, G.S.
PDB entry 4x07: Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type A (triglycan)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII-4/Saga4/2006/JP
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2014-11-20
Authors: Singh, B.K., Hansman, G.S.
PDB entry 4x08: Structure of H128N/ECP mutant in complex with sulphate anions at 1.34 Angstroms.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2014-11-21
Authors: Blanco, J.A., Garcia, J.M., Salazar, V.A., Sanchez, D., Moussauoi, M., Boix, E.
PDB entry 4x09: Structure of human RNase 6 in complex with sulphate anions
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.722 Å
Deposited: 2014-11-21
Authors: Prats-Ejarque, G., Arranz-Trullen, J., Blanco, J.A., Pulido, D., Moussaoui, M., Boix, E.
PDB entry 4x0a: Structure of tRNA-processing enzyme complex 6
Classification: TRANSFERASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.505 Å
Deposited: 2014-11-21
Authors: Yamashita, S., Tomita, K.
PDB entry 4x0b: Structure of tRNA-processing enzyme complex 7
Classification: TRANSFERASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2014-11-21
Authors: Yamashita, S., Tomita, K.
PDB entry 4x0c: Crystal structure of P domain from norovirus strain NSW0514 in complex with HBGA type Lex (triglycan)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2014-11-21
Authors: Singh, B.K., Hansman, G.S.
PDB entry 4x0e: Structure of M. tuberculosis nicotinate mono nucleotide adenylyltransferase
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2014-11-21
Authors: Zuccola, H.J., Ostermna, A.L.
PDB entry 4x0f: Crystal structure of crosslink stabilized long-form PDE4B in complex with (R)-(-)-rolipram
Classification: hydrolase/hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.22 Å
Deposited: 2014-11-21
Authors: Cedervall, P., Pandit, J.
PDB entry 4x0g: Structure of Bsg25A binding with DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2065 Å
Deposited: 2014-11-21
Authors: Ren, A.
PDB entry 4x0j: Trypanosoma brucei haptoglobin-haemoglobin receptor
Classification: PROTEIN TRANSPORT
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-11-21
Authors: Lane-Serff, H., MacGregor, P., Lowe, E.D., Carrington, M., Higgins, M.K.
PDB entry 4x0k: Engineered Fab fragment specific for EYMPME (EE) peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2014-11-21
Authors: Johnson, J.L., Lieberman, R.L.
PDB entry 4x0l: Human haptoglobin-haemoglobin complex
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-11-21
Authors: Lane-Serff, H., MacGregor, P., Lowe, E.D., Carrington, M., Higgins, M.K.
PDB entry 4x0m: Selection of fragments for kinase inhibitor design: decoration is key
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2014-11-21
Authors: Czodrowski, P., Hoelzemann, G., Barnickel, G., Greiner, H., Musil, D.