LiteFold/PDB huggingface dataset:
PDB entry 2e7z: Acetylene Hydratase from Pelobacter acetylenicus
Classification: LYASE
Source organism: Pelobacter acetylenicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2007-01-15
Authors: Einsle, O., Kroneck, P.M.H., Seiffert, G.B., Messerschmidt, A.
PDB entry 2e80: Cytochrome c Nitrite Reductase from Wolinella succinogenes with bound substrate nitrite
Classification: OXIDOREDUCTASE
Source organism: Wolinella succinogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-01-15
Authors: Einsle, O., Kroneck, P.M.H.
PDB entry 2e81: Cytochrome c Nitrite Reductase from Wolinella succinogenes with bound intermediate hydroxylamine
Classification: OXIDOREDUCTASE
Source organism: Wolinella succinogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-15
Authors: Einsle, O., Kroneck, P.M.H.
PDB entry 2e82: Crystal structure of human D-amino acid oxidase complexed with imino-DOPA
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2007-01-16
Authors: Kawazoe, T., Tsuge, H., Imagawa, T., Kuramitsu, S., Fukui, K.
PDB entry 2e83: T31V mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Classification: ELECTRON TRANSPORT
Source organism: Desulfovibrio vulgaris str. 'Miyazaki F'
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2007-01-17
Authors: Shibata, N., Higuchi, Y.
PDB entry 2e84: Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Miyazaki F) in the presence of zinc ion
Classification: ELECTRON TRANSPORT
Source organism: Desulfovibrio vulgaris str. 'Miyazaki F'
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2007-01-17
Authors: Shibata, N., Suto, K., Sato, M., Morimoto, Y., Kitamura, M., Higuchi, Y.
PDB entry 2e85: Crystal Structure of the Hydrogenase 3 Maturation protease
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-01-18
Authors: Tanaka, T., Kumarevel, T.S., Shinkai, A., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e86: Azide bound to copper containing nitrite reductase from A. faecalis S-6
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2007-01-19
Authors: Tocheva, E.I., Murphy, M.E.P.
PDB entry 2e87: Crystal structure of hypothetical GTP-binding protein PH1320 from Pyrococcus horikoshii OT3, in complex with GDP
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2007-01-19
Authors: Kukimoto-Niino, M., Bessho, Y., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e88: Crystal structure of the human Hsp70 ATPase domain in the apo form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-01-19
Authors: Shida, M., Ishii, R., Takagi, T., Kishishita, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e89: Crystal structure of Aquifex aeolicus TilS in a complex with ATP, Magnesium ion, and L-lysine
Classification: LIGASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-01-19
Authors: Kuratani, M., Yoshikawa, Y., Takahashi, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8a: Crystal structure of the human Hsp70 ATPase domain in complex with AMP-PNP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2007-01-19
Authors: Shida, M., Ishii, R., Takagi, T., Kishishita, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8b: Crystal structure of the putative protein (Aq1419) from Aquifex aeolicus VF5
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2007-01-19
Authors: Kumarevel, T.S., Malathy sony, S.M., Ponnuswamy, M.N., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8c: Crystal structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-01-19
Authors: Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8d: 3D Structure of amyloid protofilaments of beta2-microglobulin fragment probed by solid-state NMR
Classification: PROTEIN FIBRIL, IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: SOLID-STATE NMR
Deposited: 2007-01-19
Authors: Fujiwara, T.
PDB entry 2e8e: Crystal Structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5 (Reduced form)
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-01-19
Authors: Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8f: Crystal Structure of a hypothetical protein (Aq_1549) from Aquifex aeolicus VF5 (Oxidised form)
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-01-19
Authors: Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8g: The structure of protein from P. horikoshii at 1.7 angstrom resolution
Classification: RNA BINDING PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-01-19
Authors: Gao, Y.G., Yao, M., Tanaka, I.
PDB entry 2e8h: Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-01-19
Authors: Sugahara, M., Taketa, M., Tanaka, Y., Matsuura, Y., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8i: Structure of 6-aminohexanoate-dimer hydrolase, D1 mutant
Classification: HYDROLASE
Source organism: Flavobacterium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2007-01-20
Authors: Shibata, N., Higuchi, Y., Negoro, S.
PDB entry 2e8j: Solution structure of dynein light chain 2A
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-21
Authors: Kouno, T., Nabeshima, Y., Mizuguchi, M., Kawano, K.
PDB entry 2e8m: Solution structure of the C-terminal SAM-domain of epidermal growth receptor pathway substrate 8
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-22
Authors: Goroncy, A.K., Sato, M., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8n: Solution structure of the C-terminal SAM-domain of EphaA2: Ephrin type-A receptor 2 precursor (EC 2.7.10.1)
Classification: TRANSFERASE, SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-22
Authors: Goroncy, A.K., Sato, M., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8o: Solution structure of the N-terminal SAM-domain of the SAM domain and HD domain containing protein 1 (Dendritic cell-derived IFNG-induced protein) (DCIP) (Monocyte protein 5) (MOP-5)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-22
Authors: Goroncy, A.K., Tochio, N., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8p: Solution structure of the N-terminal SAM-domain of E74-like factor 3
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-22
Authors: Goroncy, A.K., Sato, M., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8q: Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (K19M)
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-01-23
Authors: Asada, Y., Shimada, H., Taketa, M., Nakamoto, T., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8r: Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-23
Authors: Asada, Y., Taketa, M., Shimada, H., Matsuura, Y., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8s: Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-01-23
Authors: Asada, Y., Shimada, H., Taketa, M., Nakamoto, T., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e8t: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium, FsPP and IPP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2007-01-23
Authors: Guo, R.T., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e8u: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and IPP (P21)
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2007-01-23
Authors: Guo, R.T., Chen, C.K.-M., Ko, T.P., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e8v: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with product GGPP (P21)
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-01-23
Authors: Chen, C.K.-M., Guo, R.T., Ko, T.P., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e8w: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and IPP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e8x: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and GPP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e8y: Crystal structure of pullulanase type I from Bacillus subtilis str. 168
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2007-01-24
Authors: Mikami, B., Malle, D., Utsumi, S., Iwamoto, H., Katsuya, Y.
PDB entry 2e8z: Crystal structure of pullulanase type I from Bacillus subtilis str. 168 complexed with alpha-cyclodextrin
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-01-24
Authors: Mikami, B., Malle, D., Utsumi, S., Iwamoto, H., Katsuya, Y.
PDB entry 2e90: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium, pyrophosphate and FPP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e91: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-91
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Cao, R., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e92: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-261
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Cao, R., Jeng, W.Y., Chen, C.K.-M., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e93: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with BPH-629
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Cao, R., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e94: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-364
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Cao, R., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e95: S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-675
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Cao, R., Ko, T.P., Jeng, W.Y., Chang, T.H., Chen, C.K.-M., Liang, P.H., Oldfield, E., Wang, A.H.-J.
PDB entry 2e98: E. coli undecaprenyl pyrophosphate synthase in complex with BPH-629
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Cao, R., Liang, P.H., Oldfield, E., Wang, A.H.J.
PDB entry 2e99: E. coli undecaprenyl pyrophosphate synthase in complex with BPH-608
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Cao, R., Liang, P.H., Oldfield, E., Wang, A.H.J.
PDB entry 2e9a: E. coli undecaprenyl pyrophosphate synthase in complex with BPH-628
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Cao, R., Liang, P.H., Oldfield, E., Wang, A.H.J.
PDB entry 2e9b: Crystal structure of pullulanase type I from Bacillus subtilis str. 168 complexed with maltose
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-01-24
Authors: Mikami, B., Malle, D., Utsumi, S., Iwamoto, H., Katsuya, Y.
PDB entry 2e9c: E. coli undecaprenyl pyrophosphate synthase in complex with BPH-675
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Ko, T.P., Cao, R., Liang, P.H., Oldfield, E., Wang, A.H.J.
PDB entry 2e9d: E. coli undecaprenyl pyrophosphate synthase in complex with BPH-676
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-01-24
Authors: Guo, R.T., Cao, R., Ko, T.P., Liang, P.H., Oldfield, E., Wang, A.H.J.
PDB entry 2e9e: Crystal structure of the complex of goat lactoperoxidase with Nitrate at 3.25 A resolution
Classification: METAL BINDING PROTEIN, OXIDOREDUCTASE
Source organism: Capra hircus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2007-01-25
Authors: Singh, A.K., Prem kumar, R., Singh, N., Sharma, S., Singh, S.B., Bhushan, A., Kaur, P., Singh, T.P.
PDB entry 2e9f: Crystal Structure of T.th.HB8 Argininosuccinate lyase complexed with L-Arginine
Classification: LYASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2007-01-25
Authors: Goto, M.
PDB entry 2e9g: Solution structure of the alpha adaptinC2 domain from human Adapter-related protein complex 1 gamma 2 subunit
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-25
Authors: Tomizawa, T., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e9h: Solution structure of the eIF-5_eIF-2B domain from human Eukaryotic translation initiation factor 5
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-25
Authors: Tomizawa, T., Tochio, N., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e9i: Solution structure of the N-terminal extended 20th Filamin domain from human Filamin-B
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-25
Authors: Tomizawa, T., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e9j: Solution structure of the 14th filamin domain from human Filamin-B
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-25
Authors: Tomizawa, T., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e9k: Solution structure of the CH domain from human MICAL-2
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-25
Authors: Tomizawa, T., Tochio, N., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e9l: Crystal Structure of human Cytosolic Neutral beta-Glycosylceramidase (Klotho-related Prote:KLrP) complex with Glucose and fatty acids
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-01-25
Authors: Kakuta, Y., Hayashi, Y., Okino, N., Ito, M.
PDB entry 2e9m: Crystal Structure of human Cytosolic Neutral beta-Glycosylceramidase (Klotho-related Prote:KLrP) complex with Galactose and fatty acids
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-01-25
Authors: Kakuta, Y., Hayashi, Y., Okino, N., Ito, M.
PDB entry 2e9n: Structure of h-CHK1 complexed with A767085
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-01-26
Authors: Park, C.
PDB entry 2e9o: Structure of h-CHK1 complexed with AA582939
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-01-26
Authors: Park, C.
PDB entry 2e9p: Structure of h-CHK1 complexed with A771129
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2007-01-26
Authors: Park, C.
PDB entry 2e9q: Recombinant pro-11S globulin of pumpkin
Classification: PLANT PROTEIN
Source organism: Cucurbita maxima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-01-26
Authors: Fukuda, T., Prak, K., Itoh, T., Masuda, T., Maruyama, N., Mikami, B., Utsumi, S.
PDB entry 2e9r: Foot-and-mouth disease virus RNA-dependent RNA polymerase in complex with a template-primer RNA and with ribavirin
Classification: TRANSFERASE/RNA
Source organism: Foot-and-mouth disease virus C-S8c1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2007-01-26
Authors: Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.
PDB entry 2e9s: human neuronal Rab6B in three intermediate forms
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2007-01-26
Authors: Vellieux, F.M., Tcherniuk, S., Garcia-Saez, I., Kozielski, F.
PDB entry 2e9t: Foot-and-mouth disease virus RNA-polymerase RNA dependent in complex with a template-primer RNA and 5F-UTP
Classification: TRANSFERASE/RNA
Source organism: Foot-and-mouth disease virus C-S8c1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2007-01-26
Authors: Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.
PDB entry 2e9u: Structure of h-CHK1 complexed with A780125
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-27
Authors: Park, C.
PDB entry 2e9v: Structure of h-CHK1 complexed with A859017
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-01-27
Authors: Park, C.
PDB entry 2e9w: Crystal structure of the extracellular domain of Kit in complex with stem cell factor (SCF)
Classification: TRANSFERASE/HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2007-01-27
Authors: Yuzawa, S., Opatowsky, Y., Zhang, Z., Mandiyan, V., Lax, I., Schlessinger, J.
PDB entry 2e9x: The crystal structure of human GINS core complex
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-01-27
Authors: Kamada, K., Hanaoka, F.
PDB entry 2e9y: Crystal structure of project APE1968 from Aeropyrum pernix K1
Classification: TRANSFERASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-01-29
Authors: Shimizu, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2e9z: Foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, ATP and UTP
Classification: TRANSFERASE/RNA
Source organism: Foot-and-mouth disease virus C-S8c1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2007-01-29
Authors: Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.
PDB entry 2ea0: Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli in complex with AP-site containing DNA substrate
Classification: HYDROLASE/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2007-01-29
Authors: Golan, G., Zharov, D.O., Grollman, A.P., Shoham, G.
PDB entry 2ea1: Crystal structure of Ribonuclease I from Escherichia coli COMPLEXED WITH GUANYLYL-2(PRIME),5(PRIME)-GUANOSINE
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-01-29
Authors: Zhou, K., Pan, J., Padmanabhan, S., Lim, R.W., Lim, L.W.
PDB entry 2ea2: h-MetAP2 complexed with A773812
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-01-30
Authors: Park, C.H.
PDB entry 2ea3: Crystal Structure Of Cellulomonas Bogoriensis Chymotrypsin
Classification: HYDROLASE
Source organism: Cellulomonas bogoriensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2007-01-30
Authors: Shaw, A., Bott, R.
PDB entry 2ea4: h-MetAP2 complexed with A797859
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2007-01-30
Authors: Park, C.H.
PDB entry 2ea5: Solution Structure of the RING domain of the human Cell growth regulator with RING finger domain 1 protein
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-30
Authors: Miyamoto, K., Tomizawa, T., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ea6: Solution Structure of the RING domain of the human ring finger protein 4
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-30
Authors: Miyamoto, K., Yoneyama, M., Tomizawa, T., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ea7: Crystal Structure of Adzuki Bean 7S Globulin-1
Classification: PLANT PROTEIN
Source organism: Vigna angularis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-01-30
Authors: Fukuda, T., Mikami, B., Utsumi, S.
PDB entry 2ea9: Crystal structure of a hypothetical protein JW2626 from E.coli
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-01-31
Authors: Okazaki, N., Kuramitsu, S., Yamamoto, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eaa: Crystal Structure of Adzuki Bean 7S Globulin-3
Classification: PLANT PROTEIN
Source organism: Vigna angularis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2007-01-31
Authors: Fukuda, T., Mikami, B., Utsumi, S.
PDB entry 2eab: Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum (apo form)
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2007-01-31
Authors: Nagae, M., Tsuchiya, A., Katayama, T., Yamamoto, K., Wakatsuki, S., Kato, R.
PDB entry 2eac: Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complex with deoxyfuconojirimycin
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-01-31
Authors: Nagae, M., Tsuchiya, A., Katayama, T., Yamamoto, K., Wakatsuki, S., Kato, R.
PDB entry 2ead: Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complex with substrate
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2007-01-31
Authors: Nagae, M., Tsuchiya, A., Katayama, T., Yamamoto, K., Wakatsuki, S., Kato, R.
PDB entry 2eae: Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complexes with products
Classification: HYDROLASE
Source organism: Bifidobacterium bifidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-01-31
Authors: Nagae, M., Tsuchiya, A., Katayama, T., Yamamoto, K., Wakatsuki, S., Kato, R.
PDB entry 2eak: Crystal structure of human galectin-9 N-terminal CRD in complex with lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2007-01-31
Authors: Nagae, M., Nakamura-Tsuruta, S., Nishi, N., Nakamura, T., Hirabayashi, J., Wakatsuki, S., Kato, R.
PDB entry 2eal: Crystal structure of human galectin-9 N-terminal CRD in complex with Forssman pentasaccharide
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-01-31
Authors: Nagae, M., Nakamura-Tsuruta, S., Nishi, N., Nakamura, T., Hirabayashi, J., Wakatsuki, S., Kato, R.
PDB entry 2eam: Solution structure of the N-terminal SAM-domain of a human putative 47 kDa protein
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-31
Authors: Goroncy, A.K., Saito, K., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ean: Solution structure of the N-terminal SAM-domain of human KIAA0902 protein (connector enhancer of kinase suppressor of ras 2)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-31
Authors: Goroncy, A.K., Yoneyama, M., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eao: Solution structure of the C-terminal SAM-domain of mouse ephrin type-B receptor 1 precursor (EC 2.7.1.112)
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-31
Authors: Goroncy, A.K., Sato, M., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eap: Solution structure of the N-terminal SAM-domain of human lymphocyte cytosolic protein 2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-01-31
Authors: Goroncy, A.K., Sato, M., Tochio, N., Koshiba, S., Watanabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eaq: Crystal structure of PDZ domain of KIAA0858 (LIM), MS0793 from Homo sapiens
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2007-01-31
Authors: Xie, Y., Kishishita, S., Murayama, K., Takemoto, C., Shirozu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ear: P21 crystal of the SR CA2+-ATPase with bound TG
Classification: HYDROLASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2007-02-02
Authors: Takahashi, M., Kondou, Y., Toyoshima, C.
PDB entry 2eat: Crystal structure of the SR CA2+-ATPASE with bound CPA and TG
Classification: HYDROLASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2007-02-02
Authors: Takahashi, M., Kondou, Y., Toyoshima, C.
PDB entry 2eau: Crystal structure of the SR CA2+-ATPASE with bound CPA in the presence of curcumin
Classification: HYDROLASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2007-02-02
Authors: Takahashi, M., Kondou, Y., Toyoshima, C.
PDB entry 2eav: Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ibeta
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-02-03
Authors: Cho, S., Mariuzza, R.A.
PDB entry 2eaw: Human UMP Synthase (C-terminal Domain- Orotidine 5'-Monophosphate Decarboxylase)
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2007-02-03
Authors: Liu, Y., Tang, H.L., Pai, E.F.
PDB entry 2eax: Crystal structure of human PGRP-IBETAC in complex with glycosamyl muramyl pentapeptide
Classification: PEPTIDOGLYCAN-BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-02-03
Authors: Cho, S.
PDB entry 2eay: Crystal Structure Of Biotin Protein Ligase From Aquifex Aeolicus
Classification: LIGASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2007-02-04
Authors: Bagautdinov, B., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eb0: Crystal structure of Methanococcus jannaschii putative family II inorganic pyrophosphatase
Classification: HYDROLASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-02-05
Authors: Shimada, A., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eb1: Crystal Structure of the C-Terminal RNase III Domain of Human Dicer
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-02-05
Authors: Takeshita, D., Zenno, S., Lee, W.C., Nagata, K., Saigo, K., Tanokura, M.
PDB entry 2eb2: Crystal structure of mutated EGFR kinase domain (G719S)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-02-06
Authors: Yoshikawa, S., Kukimoto-Niino, M., Chen, L., Liu, Z.J., Wang, B.C., Shirouzu, M., Senba, K., Yamamoto, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eb3: Crystal structure of mutated EGFR kinase domain (L858R) in complex with AMPPNP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2007-02-06
Authors: Yoshikawa, S., Kukimoto-Niino, M., Shirouzu, M., Senba, K., Yamamoto, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eb4: Crystal structure of apo-HpcG
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-02-07
Authors: Izumi, A., Rea, D., Adachi, T., Unzai, S., Park, S.Y., Roper, D.I., Tame, J.R.H.
PDB entry 2eb5: Crystal structure of HpcG complexed with oxalate
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-02-07
Authors: Izumi, A., Rea, D., Adachi, T., Unzai, S., Park, S.Y., Roper, D.I., Tame, J.R.H.
PDB entry 2eb6: Crystal structure of HpcG complexed with Mg ion
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2007-02-07
Authors: Izumi, A., Rea, D., Adachi, T., Unzai, S., Park, S.Y., Roper, D.I., Tame, J.R.H.
PDB entry 2eb7: Crystal structure of the hypothetical regulator from Sulfolobus tokodaii 7
Classification: TRANSCRIPTION
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-02-07
Authors: Kumarevel, T.S., Nishio, M., Shinkai, A., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eb8: Crystal Structure of Cu(II)(Sal-Phe)/apo-Myoglobin
Classification: OXYGEN STORAGE/TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2007-02-07
Authors: Abe, S., Okazaki, S., Ueno, T., Hikage, T., Suzuki, A., Yamane, T., Watanabe, Y.
PDB entry 2eb9: Crystal Structure of Cu(II)(Sal-Leu)/apo-Myoglobin
Classification: OXYGEN STORAGE/TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-02-07
Authors: Abe, S., Okazaki, S., Ueno, T., Hikage, T., Suzuki, A., Yamane, T., Watanabe, Y.
PDB entry 2eba: Crystal structure of the putative glutaryl-CoA dehydrogenase from thermus thermophilus
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2007-02-07
Authors: Kumarevel, T.S., Karthe, P., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebb: Crystal structure of pterin-4-alpha-carbinolamine dehydratase (pterin carbinolamine dehydratase) from Geobacillus kaustophilus HTA426
Classification: LYASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-02-07
Authors: Kumarevel, T.S., Karthe, P., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebd: Crystal structure of 3-oxoacyl-[acyl-carrier-protein] synthase III from Aquifex aeolicus VF5
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-02-08
Authors: Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebe: Crystal structure of Lys11 to Met mutant of hypothetical protein from Thermus thermophilus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-02-08
Authors: Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebf: Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Classification: TOXIN
Source organism: Pasteurella multocida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-02-08
Authors: Kitadokoro, K., Horiguchi, Y., Kamitani, S.
PDB entry 2ebg: Crystal structure of a hypothetical protein from thermus thermophilus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-02-08
Authors: Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebh: Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Classification: TOXIN
Source organism: Pasteurella multocida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2007-02-08
Authors: Kitadokoro, K., Horiguchi, Y., Kamitani, S.
PDB entry 2ebi: Arabidopsis GT-1 DNA-binding domain with T133D phosphomimetic mutation
Classification: DNA BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 2007-02-08
Authors: Nagata, T., Noto, K., Niyada, E., Ikeda, Y., Yamamoto, Y., Uesugi, S., Murata, J., Hiratsuka, K., Katahira, M.
PDB entry 2ebj: Crystal structure of pyrrolidone carboxyl peptidase from Thermus thermophilus
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-02-08
Authors: Kumarevel, T.S., Karthe, P., Agari, Y., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebk: Solution structure of the RWD domain of human RWD domain containing protein 3
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Yoneyama, M., Koshiba, S., Watabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebl: Solution structure of the Zinc finger, C4-type domain of human COUP transcription factor 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Yoneyama, M., Koshiba, S., Watabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebm: Solution structure of the RWD domain of human RWD domain containing protein 1
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Yoneyama, M., Tomizawa, T., Koshiba, S., Watabe, S., Harada, T., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebn: CRYSTAL STRUCTURE OF ENDO-BETA-N-ACETYLGLUCOSAMINIDASE F1, AN ALPHA(SLASH)BETA-BARREL ENZYME ADAPTED FOR A COMPLEX SUBSTRATE
Classification: HYDROLASE
Source organism: Elizabethkingia meningoseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 1994-08-30
Authors: Van Roey, P.
PDB entry 2ebo: CORE STRUCTURE OF GP2 FROM EBOLA VIRUS
Classification: ENVELOPE GLYCOPROTEIN
Source organism: Zaire ebolavirus - Mayinga (Zaire, 1976)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1998-12-24
Authors: Malashkevich, V.N., Schneider, B.J., Mcnally, M.L., Milhollen, M.A., Pang, J.X., Kim, P.S.
PDB entry 2ebp: Solution structure of the SH3 domain from human SAM and SH3 domain containing protein 1
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Zhang, H.P., Kurosaki, C., Yoshida, M., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebq: Solution structure of the second zf-RanBP domain from human Nuclear pore complex protein Nup153
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Zhang, H.P., Kurosaki, C., Yoshida, M., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebr: Solution structure of the fourth zf-RanBP domain from human Nuclear pore complex protein Nup153
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Zhang, H.P., Nagashima, T., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebs: Crystal Structure Anaalysis of Oligoxyloglucan reducing-end-specific cellobiohydrolase (OXG-RCBH) D465N Mutant Complexed with a Xyloglucan Heptasaccharide
Classification: HYDROLASE
Source organism: Geotrichum sp. M128
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2007-02-09
Authors: Yaoi, K., Kondo, H., Hiyoshi, A., Noro, N., Sugimoto, H., Miyazaki, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebt: Solution structure of three tandem repeats of zf-C2H2 domains from human Kruppel-like factor 5
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Nagashima, T., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebu: Solution structure of the BRCT domain from human replication factor C large subunit 1
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Nagashima, T., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebv: Solution structure of the third zf-RanBP domain from human Nuclear pore complex protein Nup153
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Zhang, H.P., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebw: Solution structure of the BRCT domain from human DNA repair protein REV1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Nagashima, T., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2eby: Crystal structure of a hypothetical protein from E. Coli
Classification: TRANSCRIPTION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2007-02-09
Authors: Karthe, P., Kumarevel, T.S., Ebihara, A., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ebz: Solution structure of the RGS domain from human Regulator of G-protein signaling 12 (RGS12)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Zhang, H.P., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ec0: RNA-dependent RNA polymerase of foot-and-mouth disease virus in complex with a template-primer RNA and ATP
Classification: TRANSFERASE/RNA
Source organism: Foot-and-mouth disease virus C-S8c1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2007-02-09
Authors: Ferrer-Orta, C., Arias, A., Perez-Luque, R., Escarmis, C., Domingo, E., Verdaguer, N.
PDB entry 2ec1: Solution structure of the RanBD1 domain from human Nucleoporin 50 kDa
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Zhang, H.P., Kurosaki, C., Yoshida, M., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ec2: Crystal structure of transposase from Sulfolobus tokodaii
Classification: GENE REGULATION
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2007-02-09
Authors: Kawai, K., Suzuki, A., Kuramitsu, S., Masui, R., Yamane, T.
PDB entry 2ec3: Solution structure of the 11th FN1 domain from human Fibronectin 1
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Sano, R., Hayashi, F., Izumi, K., Yoshida, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ec4: Solution structure of the UAS domain from human FAS-associated factor 1
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-09
Authors: Zhang, H.P., Hayashi, F., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ec5: Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Classification: TOXIN
Source organism: Pasteurella multocida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2007-02-09
Authors: Kitadokoro, K., Horiguchi, Y., Kamitani, S.
PDB entry 2ec6: Placopecten Striated Muscle Myosin II
Classification: CONTRACTILE PROTEIN
Source organism: Placopecten magellanicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2007-02-10
Authors: Yang, Y., Brown, J., Samudrala, G., Reutzel, R., Szent-Gyorgyi, A.
PDB entry 2ec7: Solution Structure of Human Immunodificiency Virus Type-2 Nucleocapsid Protein
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 2 (ISOLATE GHANA-1)
Experimental method: SOLUTION NMR
Deposited: 2007-02-10
Authors: Matsui, T., Kodera, Y., Tanaka, T., Endoh, H., Tanaka, H., Miyauchi, E., Komatsu, H., Kohno, T., Maeda, T.
PDB entry 2ec8: Crystal structure of the exctracellular domain of the receptor tyrosine kinase, Kit
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2007-02-11
Authors: Yuzawa, S., Opatowsky, Y., Zhang, Z., Mandiyan, V., Lax, I., Schlessinger, J.
PDB entry 2ec9: Crystal structure analysis of human Factor VIIa , Souluble tissue factor complexed with BCX-3607
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-02-13
Authors: Raman, K., Yarlagadda, B.
PDB entry 2ecb: The solution structure of the third homeobox domain of human zinc fingers and homeoboxes protein
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-13
Authors: Ohnishi, S., Tochio, N., Sasagawa, A., Saito, K., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ecc: Solution Structure of the second Homeobox Domain of Human Homeodomain Leucine Zipper-Encoding Gene (Homez)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-13
Authors: Ohnishi, S., Kamatari, Y.O., Tochio, N., Nameki, N., Miyamoto, K., Li, H., Kobayashi, N., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ecd: Solution structure of the human ABL2 SH2 domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-02-13
Authors: Kasai, T., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ece: X-ray structure of hypothetical selenium-binding protein from Sulfolobus tokodaii, ST0059
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-02-13
Authors: Yamada, M., Yoshida, H., Kuramitsu, S., Kamitori, S.
PDB entry 2ecf: Crystal Structure of Dipeptidyl Aminopeptidase IV from Stenotrophomonas maltophilia
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2007-02-13
Authors: Nakajima, Y., Ito, K., Yoshimoto, T.