LiteFold/PDB huggingface dataset:
PDB entry 9bh3: Structure of apo Aggregatibacter actinomycetemcomitans SiaP protein
Classification: MEMBRANE PROTEIN
Source organism: Aggregatibacter actinomycetemcomitans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2024-04-19
Authors: King-Hudson, T.-R.J., Davies, J.S., Dobson, R.C.J.
PDB entry 9bh4: PRMT1 hexamer, Protein Arginine Methyl transferase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-04-19
Authors: Nadendla, E.K., Wang, C.H.
PDB entry 9bh5: High-resolution C. elegans 80S ribosome structure - class 1
Classification: RIBOSOME
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2024-04-19
Authors: Sehgal, E., Serrao, V.H.B., Arribere, J.
PDB entry 9bh6: Human DNA polymerase theta helicase domain tetramer in the apo form
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-04-19
Authors: Zerio, C.J., Lander, G.C.
PDB entry 9bh7: Human DNA polymerase theta helicase domain dimer in the apo form
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-04-19
Authors: Zerio, C.J., Lander, G.C.
PDB entry 9bh8: Human DNA polymerase theta helicase domain dimer bound to DNA in the microhomology searching conformation
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-04-19
Authors: Zerio, C.J., Lander, G.C.
PDB entry 9bh9: Human DNA polymerase theta helicase domain dimer bound to DNA in the microhomology aligning conformation
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-04-19
Authors: Zerio, C.J., Lander, G.C.
PDB entry 9bha: Human DNA polymerase theta helicase domain dimer bound to DNA in the microhomology annealed conformation
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-04-19
Authors: Zerio, C.J., Lander, G.C.
PDB entry 9bhb: Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-04-19
Authors: Raghavan, S.S.R., Ward, A.B.
PDB entry 9bhc: Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC)
Classification: MEMBRANE PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2024-04-19
Authors: Guo, Y., Borek, D., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9bhd: PRMT1-Octamer
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2024-04-19
Authors: Nadendla, E.K., Wang, C.H.
PDB entry 9bhe: Salmonella undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (ArnC) bound to UDP
Classification: MEMBRANE PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-04-19
Authors: Guo, Y., Borek, D., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9bhf: Structure of apo Aggregatibacter actinomycetemcomitans SiaP protein
Classification: MEMBRANE PROTEIN
Source organism: Aggregatibacter actinomycetemcomitans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-04-20
Authors: King-Hudson, T.-R.J., Davies, J.S., Dobson, R.C.J.
PDB entry 9bhg: PRMT1-Tetramer
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2024-04-20
Authors: Nadendla, E.K., Wang, C.H.
PDB entry 9bhh: Cryo-EM structure of Chikungunya virus asymmetric unit with Fab IM-CKV063
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Chikungunya virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-04-20
Authors: Su, G.C., Galaz-Montoya, J.G., Pintilie, G., Jin, J., Chiu, W.
PDB entry 9bhi: Crystal structure of the MerTK kinase domain with SA4488
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-04-20
Authors: Jakob, C.G., Qui, W., Jain, R.
PDB entry 9bhj: MerTK in complex with small molecule 6-{1-[([1,1'-biphenyl]-4-yl)carbamoyl]azetidin-3-yl}-3-[(1-methyl-1H-pyrazol-4-yl)amino]pyrazine-2-carboxamide
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.294 Å
Deposited: 2024-04-20
Authors: Jakob, C.G., Qiu, W.
PDB entry 9bhk: MerTK in complex with small molecule inhibitor 6-{1-[6-(3-hydroxy-3-methylbutoxy)-1,3-benzoxazol-2-yl]azetidin-3-yl}-3-[(1-methyl-1H-pyrazol-4-yl)amino]pyrazine-2-carboxamide
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.106 Å
Deposited: 2024-04-20
Authors: Jakob, C.G., Gurbani, D., Qiu, W.
PDB entry 9bhl: Human proton sensing receptor GPR65 in complex with miniGs
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-04-21
Authors: Howard, M.K., Hoppe, N., Huang, X.P., Macdonald, C.B., Mehrotra, E., Rockefeller Grimes, P., Zahm, A.M., Trinidad, D.D., English, J., Coyote-Maestas, W., Manglik, A.
PDB entry 9bhm: Human proton sensing receptor GPR68 in complex with miniGs
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-04-21
Authors: Howard, M.K., Hoppe, N., Huang, X.P., Macdonald, C.B., Mehrotra, E., Rockefeller Grimes, P., Zahm, A.M., Trinidad, D.D., English, J., Coyote-Maestas, W., Manglik, A.
PDB entry 9bhn: Solution NMR structure of halichondamide A, a fused bicyclic cysteine knot undecapeptide from the marine sponge Halichondria bowerbanki
Classification: BIOSYNTHETIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-04-21
Authors: Agarwal, V., McShan, A.C., Zhong, W.
PDB entry 9bho: Crystal structure of KRAS G12S in a transition state mimetic complex with CYPA and RMC-7977
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-04-21
Authors: Pourfarjam, Y., Goldgur, Y., Cuevas-Navarro, A., Lito, P.
PDB entry 9bhp: Crystal structure of KRAS G12C in a transition state mimetic complex with CYPA and RMC-7977
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-21
Authors: Pourfarjam, Y., Goldgur, Y., Cuevas-Navarro, A., Lito, P.
PDB entry 9bhq: Crystal structure of KRAS G12A in a transition state mimetic complex with CYPA and RMC-7977
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-04-21
Authors: Pourfarjam, Y., Goldgur, Y., Cuevas-Navarro, A., Lito, P.
PDB entry 9bhr: Crystal structure of the WDR domain of human DCAF1 in complex with OICR-40155 compound
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2024-04-21
Authors: kimani, S., Dong, A., Li, Y., Seitova, A., Al-Awar, R., Krausser, C., Wilson, B., Ackloo, S., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 9bhs: Crystal structure of the WDR domain of human DCAF1 in complex with OICR-9939 compound
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2024-04-21
Authors: kimani, S., Dong, A., Li, Y., Seitova, A., Al-Awar, R., Wilson, B., Ackloo, S., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 9bht: Septin Hexameric Complex SEPT2/SEPT6/SEPT7 of Ciona intestinalis by Cryo-EM
Classification: CELL CYCLE
Source organism: Ciona intestinalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2024-04-22
Authors: Mendonca, D.C., Pereira, H.M., Garratt, R.C.
PDB entry 9bhu: Streptomyces griseus Family 2B encapsulin shell
Classification: VIRUS LIKE PARTICLE
Source organism: Streptomyces griseus subsp. griseus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2024-04-22
Authors: Andreas, M.P., Giessen, T.W.
PDB entry 9bhv: Streptomyces griseus Family 2B encapsulin shell with 2-methylisoborneol synthase cargo
Classification: VIRUS LIKE PARTICLE
Source organism: Streptomyces griseus subsp. griseus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-04-22
Authors: Andreas, M.P., Giessen, T.W.
PDB entry 9bhw: Septin Tetrameric Complex SEPT7/SEPT9 of Ciona intestinalis by Cryo-EM
Classification: CELL CYCLE
Source organism: Ciona intestinalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2024-04-22
Authors: Mendonca, D.C., Pereira, H.M., Garratt, R.C.
PDB entry 9bhx: Structure of the extracellular domain of Protein Sevenless
Classification: SIGNALING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2024-04-22
Authors: Zhang, J., Klein, D.E.
PDB entry 9bhy: Structure of FbsH, an NRPS adenylation domain in the fimsbactin biosynthetic pathway bound to 2,3-dihydroxybenzoic acid.
Classification: LIGASE/SUBSTRATE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-04-22
Authors: Ahmed, S.F., Gulick, A.M.
PDB entry 9bhz: Structure of FbsH, an NRPS adenylation domain in the fimsbactin biosynthetic pathway bound to Salicyl-AMS
Classification: LIGASE/INHIBITOR
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2024-04-22
Authors: Ahmed, S.F., Gulick, A.M.
PDB entry 9bi0: Streptomyces griseus Family 2B encapsulin shell with 2-methylisoborneol synthase cargo in 20 mM cAMP
Classification: VIRUS LIKE PARTICLE
Source organism: Streptomyces griseus subsp. griseus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-04-22
Authors: Andreas, M.P., Giessen, T.W.
PDB entry 9bi1: Crystal structure of GMPPNP bound KRAS G12D in complex with CYPA and RMC-7977
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-04-22
Authors: Pourfarjam, Y., Goldgur, Y., Cuevas-Navarro, A., Lito, P.
PDB entry 9bi2: Crystal structure of GMPPNP bound KRAS G12C in complex with CYPA and RMC-7977
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-04-22
Authors: Pourfarjam, Y., Goldgur, Y., Cuevas-Navarro, A., Lito, P.
PDB entry 9bi3: Crystal structure of macrocycle containing Abeta17-23 (LVF(a-Me-F)AED) and Abeta30-36 (AIIGL(ORN)V)
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2024-04-22
Authors: Samdin, T.D., Kreutzer, A.G., Wierzbicki, M., Nowick, J.S.
PDB entry 9bi4: cryo EM structure of dsDNA bound Mre11-Rad50 complex
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-04-22
Authors: Yu, Y., Patel, D.J.
PDB entry 9bi5: Apo form Mre11-Rad50 complex
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-04-22
Authors: Yu, Y., Patel, D.J.
PDB entry 9bi6: Human proton sensing receptor GPR68 in complex with miniGsq
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Lama glama; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-04-22
Authors: Howard, M.K., Hoppe, N., Huang, X.P., Macdonald, C.B., Mehrotra, E., Rockefeller Grimes, P., Zahm, A.M., Trinidad, D.D., English, J., Coyote-Maestas, W., Manglik, A.
PDB entry 9bi7: YqiA, Klebsiella pneumoniae serine hydrolase, unbound
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-04-22
Authors: Randall, G.T., Fellner, M.
PDB entry 9bi8: Crystal structure of inhibitor GNE-6893 bound to HPK1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-04-22
Authors: Kiefer, J.R., Tellis, J.C., Chan, B.K., Wang, W., Wu, P., Choo, E.F., Heffron, T.P., Wei, B., Siu, M.
PDB entry 9bi9: GII.4 Sydney 2012 Polymerase domain of ProPol precursor
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-04-23
Authors: Eruera, A., Krause, K.
PDB entry 9bia: Cryo-EM structure of NINJ1 K45Q bound to Nb538
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-04-23
Authors: Pourmal, S., Johnson, M.C., Deshpande, I.
PDB entry 9bib: Rat GluN1-GluN2B NMDA receptor channel in complex with glycine, glutamate, and EU-1622-A, in open-channel conformation, C1 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.81 Å
Deposited: 2024-04-23
Authors: Chou, T.-H., Furukawa, H.
PDB entry 9bic: N-Me-D-Leu2,D-Thr5-clovibactin
Classification: ANTIBIOTIC
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-04-23
Authors: Kreutzer, A.G., Griffin, J.G., Nowick, J.S.
PDB entry 9bid: human ZYG11B and EloginB/C complex
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.99 Å
Deposited: 2024-04-23
Authors: Liu, X., Gross, D.J.
PDB entry 9bie: human ZYG11B ElonginB/C complex binding to SARS-CoV2 Orf10 protein
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-04-23
Authors: Liu, X., Gross, J.D.
PDB entry 9bif: Fab B11-OspCA complex
Classification: IMMUNE SYSTEM
Source organism: Borreliella burgdorferi B31; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2024-04-23
Authors: Rudolph, M.J., Mantis, N.
PDB entry 9big: Stat6 bound to degrader AK-1690
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.304 Å
Deposited: 2024-04-23
Authors: Mallik, L., Stuckey, J.A.
PDB entry 9bih: SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA with 1 nucleotide bulge
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2024-04-23
Authors: Wright, Z.M., Butay, K.J., Krahn, J.M., Borgnia, M.J., Stanley, R.E.
PDB entry 9bii: Mycobacterium tuberculosis EFPA antiparallel dimer
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-04-23
Authors: Khandelwal, N.K., Gupta, M., Stroud, R.M.
PDB entry 9bik: Crystal structure of inhibitor 1 bound to HPK1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-04-23
Authors: Kiefer, J.T., Tellis, J.C., Chan, B.K., Wang, W., Wu, P., Siu, M., Heffron, T.P., Choo, E.F.
PDB entry 9bim: Cryo-EM structure of human CHT1 in the HC-3 bound outward-facing state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2024-04-23
Authors: Xue, J., Jiang, Y.
PDB entry 9bin: BRD-8000.3 bound EFPA transporter of Mycobacterium tuberculosis
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2024-04-23
Authors: Khandelwal, N.K., Gupta, M., Stroud, R.M.
PDB entry 9bio: Structure of VRC44.01 Fab in complex with 3BNC117-purified C1080.c3 RnS SOSIP.664 HIV-1 Env trimer
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-04-23
Authors: Gorman, J., Kwong, P.D.
PDB entry 9bip: Human proton sensing receptor GPR4 in complex with miniGs
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-04-24
Authors: Howard, M.K., Hoppe, N., Huang, X.P., Macdonald, C.B., Mehrotra, E., Rockefeller Grimes, P., Zahm, A.M., Trinidad, D.D., English, J., Coyote-Maestas, W., Manglik, A.
PDB entry 9biq: BRD-9327 bound EFPA transporter of Mycobacterium tuberculosis
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-04-24
Authors: Khandelwal, N.K., Gupta, M., Stroud, R.M.
PDB entry 9bir: Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cefadroxil
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-04-24
Authors: Parker, J.L., Deme, J.C., Lea, S.M., Newstead, S.
PDB entry 9bis: Cryo-EM structure of the mammalian peptide transporter PepT2 bound to amoxicillin
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-04-24
Authors: Parker, J.L., Deme, J.C., Lea, S.M., Newstead, S.
PDB entry 9bit: Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cloxacillin, pose 1
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-04-24
Authors: Parker, J.L., Deme, J.C., Lea, S.M., Newstead, S.
PDB entry 9biu: Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cloxacillin, pose 2
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-04-24
Authors: Parker, J.L., Deme, J.C., Lea, S.M., Newstead, S.
PDB entry 9biv: Crystal Structure of Ubc13 with a New Active Site Loop Conformation
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2024-04-24
Authors: Farraj, R.A., Edwards, R.A., Glover, J.N.M.
PDB entry 9biw: Crystal structure of Chelona Toxin, a diphtheria toxin homolog, from Austwickia chelonae
Classification: TOXIN
Source organism: Austwickia chelonae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.496 Å
Deposited: 2024-04-24
Authors: Gill, S.K., Sugiman-Marangos, S.N., Melnyk, R.A.
PDB entry 9bix: Encapsulin 2 of a two-component Family 2B encapsulin shell from Streptomyces lydicus
Classification: VIRUS LIKE PARTICLE
Source organism: Streptomyces lydicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-04-24
Authors: Andreas, M.P., Dutcher, C., Giessen, T.W.
PDB entry 9biy: Crystal structure of the periplasmic domain of IgaA from Escherichia coli
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-24
Authors: Watanabe, N., Savchenko, A., Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 9biz: Crystal structure of the periplasmic domain of IgaA from Klebsiella pneumoniae
Classification: SIGNALING PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-04-24
Authors: Watanabe, N., Savchenko, A., Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 9bj0: Crystal structure of the periplasmic domain of IgaA from Escherichia coli
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2024-04-24
Authors: Watanabe, N., Savchenko, A., Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 9bj1: Crystal structure of inhibitor GNE-6893 bound to HPK1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2024-04-24
Authors: Kiefer, J.R., Tellis, J.C., Chan, B.K., Wang, W., Wu, P., Choo, E.F., Heffron, T.P., Wei, B., Siu, M.
PDB entry 9bj2: Structure of the SARS-CoV-2 S 6P trimer complex with the human neutralizing antibody Fab fragment, C1533 (local refinement of NTD and C1533)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-04-24
Authors: Rubio, A.A., Abernathy, M.E., Barnes, C.O.
PDB entry 9bj3: Structure of the SARS-CoV-2 S 6P trimer complex with the human neutralizing antibody Fab fragment, C1596
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-04-24
Authors: Rubio, A.A., Abernathy, M.E., Barnes, C.O.
PDB entry 9bj4: Structure of the SARS-CoV-2 S 6P trimer complex with the human neutralizing antibody Fab fragment, C952
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-04-24
Authors: Rubio, A.A., Abernathy, M.E., Barnes, C.O.
PDB entry 9bj5: Crystal structure of the HEPN family member AbiV (P212121 space group)
Classification: RNA BINDING PROTEIN
Source organism: Lactococcus cremoris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-04-25
Authors: Zhu, X., Moineau, S., Shi, R.
PDB entry 9bj6: Crystal structure of the HEPN family member AbiV, an RNase in a two-component antiphage system in Lactococcus lactis
Classification: RNA BINDING PROTEIN
Source organism: Lactococcus cremoris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2024-04-25
Authors: Picard, M.-E., Moineau, S., Shi, R.
PDB entry 9bj7: Crystal structure of the N-terminal truncated AbiV (residues 24-201)
Classification: RNA BINDING PROTEIN
Source organism: Lactococcus cremoris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2024-04-25
Authors: Zhu, X., Moineau, S., Shi, R.
PDB entry 9bj8: human CRL2-ZYG11B complex
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2024-04-25
Authors: Liu, X., Gross, J.D.
PDB entry 9bj9: Human CRL-2 ZYG11B binding to human NLRP1 Gly/N degron
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-04-25
Authors: Liu, X., Gross, J.D.
PDB entry 9bja: C. difficile Tcdb cysteine protease domain in complex with IP6
Classification: TOXIN
Source organism: Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-25
Authors: Veyron, S., Cummer, R.
PDB entry 9bjc: Crystal structure of CDK2/Cyclin E1 in complex with XC208
Classification: CELL CYCLE,TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2024-04-25
Authors: Hosford, C.J., Yano, J., Thevakumaran, N., Davison, J., Romeril, S., Choi, Y., Hadjithomas, M., Verdine, G.L.
PDB entry 9bje: Encapsulin 1 of a two-component Family 2B encapsulin shell from Streptomyces lydicus
Classification: VIRUS LIKE PARTICLE
Source organism: Streptomyces lydicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2024-04-25
Authors: Andreas, M.P., Dutcher, C., Giessen, T.W.
PDB entry 9bjf: Tungstate binding protein (Tungbindin) from Eubacterium limosum in apo form
Classification: METAL BINDING PROTEIN
Source organism: Eubacterium limosum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2024-04-25
Authors: Zhou, D., Rose, J.P., Chen, L., Wang, B.C.
PDB entry 9bjg: Crystal structure of broadly neutralizing human monoclonal antibody 75B10 in complex with AMA1
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-04-25
Authors: Patel, P.N., Tang, W.K., Tolia, N.H.
PDB entry 9bjh: Crystal structure of neutralizing human monoclonal antibody 75C8 in complex with AMA1 DI-DII
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-04-25
Authors: Patel, P.N., Tang, W.K., Tolia, N.H.
PDB entry 9bji: Cryo-EM structure of apo NVL
Classification: TRANSLOCASE
Source organism: Escherichia coli BL21(DE3); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-04-25
Authors: Cruz, V.E., Erzberger, J.P.
PDB entry 9bjj: Cryo-EM structure of NVL bound the the MM017 inhibitor
Classification: TRANSLOCASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-04-25
Authors: Cruz, V.E., Erzberger, J.P.
PDB entry 9bjk: Inactive mu opioid receptor bound to Nb6, naloxone and NAM
Classification: MEMBRANE PROTEIN
Source organism: Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2024-04-25
Authors: O'Brien, E.S., Wang, H., Kaavya Krishna, K., Zhang, C., Kobilka, B.K.
PDB entry 9bjl: Crystal structure of Influenza D virus Nucleoprotein (Oklahoma)
Classification: VIRAL PROTEIN
Source organism: Influenza D virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2024-04-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9bjm: Crystal Structure of Inhibitor 5c in Complex with Prefusion RSV F Glycoprotein
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Human immunodeficiency virus 1; human respiratory syncytial virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-04-25
Authors: Shaffer, P.L., Milligan, C., Abeywickrema, P.
PDB entry 9bjn: Cryo-EM of Azo-ffspy fiber
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-04-25
Authors: Zia, A., Guo, J., Xu, B., Wang, F.
PDB entry 9bjo: Cryo-EM of Azo-ffsy fiber
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-04-25
Authors: Zia, A., Guo, J., Xu, B., Wang, F.
PDB entry 9bjq: X-ray crystal structure of wild-type Thermothelomyces thermophilus polysaccharide monooxygenase 9E
Classification: OXIDOREDUCTASE
Source organism: Thermothelomyces thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-25
Authors: Thomas, W.C., Sayler, R.I., Marletta, M.A.
PDB entry 9bjr: X-ray crystal structure of Y168F variant Thermothelomyces thermophilus polysaccharide monooxygenase 9E
Classification: OXIDOREDUCTASE
Source organism: Thermothelomyces thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-04-25
Authors: Thomas, W.C., Sayler, R.I., Marletta, M.A.
PDB entry 9bjs: X-ray crystal structure of Y62W Thermothelomyces thermophilus polysaccharide monooxygenase 9E
Classification: OXIDOREDUCTASE
Source organism: Thermothelomyces thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-04-25
Authors: Thomas, W.C., Sayler, R.I., Marletta, M.A.
PDB entry 9bjt: X-ray crystal structure of Y62F Thermothelomyces thermophilus polysaccharide monooxygenase 9E
Classification: OXIDOREDUCTASE
Source organism: Thermothelomyces thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-04-25
Authors: Thomas, W.C., Sayler, R.I., Marletta, M.A.
PDB entry 9bju: Crystal structure of the complex between VHL, ElonginB, ElonginC, and compound 5
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2024-04-25
Authors: Murray, J.M., Wu, H., Fuhrmann, J., Fairbrother, W.J., DiPasquale, A.
PDB entry 9bjv: Crystal structure of hypothetical protein PA5083 from Pseudomonas aeruginosa Sulfur SAD phased
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-25
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bjw: Crystal structure of RidA family protein PA5083 from Pseudomonas aeruginosa
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2024-04-25
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bjx: GH5_4 endo-beta(1,3/1,4)-glucanase from Segatella copri
Classification: HYDROLASE
Source organism: Segatella copri DSM 18205
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-04-25
Authors: Cordeiro, R.L., Golisch, B., Brumer, H., Van Petegem, F.
PDB entry 9bjy: Crystal structure of RidA family protein PA5083 from Pseudomonas aeruginosa with TMAO bound
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2024-04-26
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bjz: Structure of the human DDD-Ube2e2 complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-04-26
Authors: Loughran, T., Turk, L.S., Brown, S.H.J., Mace, P.D.
PDB entry 9bk1: Crystal structure of Endoribonuclease L-PSP family protein PSPTO0102 Sulfur SAD phased
Classification: HYDROLASE
Source organism: Pseudomonas syringae pv. tomato
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-04-26
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bk2: Crystal structure of Lactate dehydrogenase in complex with 4-((4-(1-methyl-1H-imidazole-2-carbonyl)phenyl)amino)-4-oxo-2-(4-(trifluoromethyl)phenyl)butanoic acid (S-enantiomer, monoclinic P form)
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-04-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Sharma, H.
PDB entry 9bk3: Crystal structure of Lactate dehydrogenase in complex with 4-((4-(1-methyl-1H-imidazole-2-carbonyl)phenyl)amino)-4-oxo-2-(4-(trifluoromethyl)phenyl)butanoic acid (R-enantiomer, orthorhombic P form)
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-04-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Sharma, H.
PDB entry 9bk4: Crystal structure of RidA family protein PA5083 from Pseudomonas aeruginosa with pyruvic acid bound
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-04-26
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bk5: Structure of LNG binder complex
Classification: DE NOVO PROTEIN/TOXIN
Source organism: Naja kaouthia; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2024-04-26
Authors: Bera, A.K., Torres, S.V., Kang, A., Baker, D.
PDB entry 9bk6: Structure of B10_CYTX binder-complex
Classification: DE NOVO PROTEIN/TOXIN
Source organism: Naja pallida; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-04-26
Authors: Bera, A.K., Torres, S.V., Kang, A., Baker, D.
PDB entry 9bk7: Structure of SHRT_binder
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2024-04-26
Authors: Bera, A.K., Torres, S.V., Kang, A., Baker, D.
PDB entry 9bk8: Crystal structure of RidA family protein PA5083 from Pseudomonas aeruginosa with 2-ketobutyric acid bound
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-04-26
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bk9: Crystal structure of Rid family protein PA0814 from Pseudomonas aeruginosa
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-04-26
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bka: Crystal structure of Rid family protein PSPTO3006
Classification: HYDROLASE
Source organism: Pseudomonas syringae pv. tomato
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-04-26
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bkb: Crystal structure of Rid family protein ACIAD3089 from Acinetobacter baylyi
Classification: HYDROLASE
Source organism: Acinetobacter baylyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-26
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bkc: Crystal structure of Rid family protein PFL1385 from Pseudomonas fluorescens
Classification: HYDROLASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2024-04-27
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bkd: The structure of human Pdcd4 bound to the 40S small ribosomal subunit
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-04-27
Authors: Brito Querido, J., Sokabe, M., Diaz-Lopez, I., Gordiyenko, Y., Zuber, P., Albacete-Albacete, L., Ramakrishnan, V., S.Fraser, C.
PDB entry 9bke: STRUCTURE OF 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE (HPAB), OXYGENASE COMPONENT FROM ESCHERICHIA COLI MUTANT XS6 WITH AMP BOUND
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-04-27
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bkf: Crystal structure of selenomethionine labeled bovine trypsin mutant - S195A solved by Sulphur-SAD at 1A wavelength
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-04-27
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bkg: Crystal structure of selenomethionine labeled bovine trypsin mutant - S195A solved by Sulphur-SAD at 1.54A wavelength
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-04-27
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bkh: Crystal structure of RidA family protein PA5083 from Pseudomonas aeruginosa with Acetaldehyde bound
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-04-28
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bki: Crystal structure of Rid family protein ACIAD3089 from Acinetobacter baylyi in C2 space group
Classification: HYDROLASE
Source organism: Acinetobacter baylyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2024-04-28
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bkj: Cholecystokinin 1 receptor (CCK1R) Y140A mutant, Gq chimera (mGsqi) complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-04-29
Authors: Cary, B.P., Harikumar, K.G., Zhao, P., Desai, A.J., Mobbs, J.M., Toufaily, C., Furness, S.G.B., Christopoulos, A., Belousoff, M.J., Wootten, D., Sexton, P.M., Miller, L.J.
PDB entry 9bkk: Cholecystokinin 1 receptor (CCK1R) sterol 7M mutant, Gq chimera (mGsqi) complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2024-04-29
Authors: Harikumar, K.G., Zhao, P., Cary, B.P., Xu, X., Desai, A.J., Mobbs, J.I., Toufaily, C., Furness, S.G.B., Christopoulos, A., Belousoff, M.J., Wootten, D., Sexton, P.M., Miller, L.J.
PDB entry 9bkl: Cobalt substituted rubredoxin from Pyrococcus furiosus solved by Co/S-SAD
Classification: ELECTRON TRANSPORT
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-04-29
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bkm: DHODH in complex with Ligand 10
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-04-29
Authors: Shaffer, P.L.
PDB entry 9bkn: DHODH in complex with Ligand 16
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-04-29
Authors: Shaffer, P.L.
PDB entry 9bko: DHODH in complex with Ligand 26
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2024-04-29
Authors: Shaffer, P.L.
PDB entry 9bkp: Crystal structure of rubredoxin from Pyrococcus furiosus reconstituted with FeCl3 solved by Fe/S-SAD
Classification: ELECTRON TRANSPORT
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-29
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bkq: Structure of penguinpox cGAMP PDE in apo and post reaction states
Classification: VIRAL PROTEIN
Source organism: Penguinpox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-29
Authors: Hobbs, S.J., Nomburg, J., Doudna, J.A., Kranzusch, P.J.
PDB entry 9bkr: Crystal structure of the Human TRIP12 WWE domain (isoform 2) in complex with ATP
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-04-29
Authors: Kimani, S., Dong, A., Li, Y., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 9bks: Crystal structure of the Human TRIP12 WWE domain (isoform 2) in complex with ADP
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2024-04-29
Authors: Kimani, S., Dong, A., Li, Y., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 9bkt: Crystal structure of rubredoxin from Pyrococcus furiosus reconstituted with FeSO4 solved by Fe/S-SAD
Classification: ELECTRON TRANSPORT
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-29
Authors: Zhou, D., Chen, L., Rose, J.P., Wang, B.C.
PDB entry 9bku: Cryo-EM structure of TRPV3 K169A in nanodiscs incubated with NASPM
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2024-04-29
Authors: Zhang, J., Yuan, P., Maksaev, G.
PDB entry 9bkv: DosP R97A bent form
Classification: OXYGEN BINDING
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2024-04-29
Authors: Kumar, P., Kober, D.L.
PDB entry 9bkw: Crystal structure of a C2 domain from Trichomonas vaginalis
Classification: LIPID BINDING PROTEIN
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-04-29
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9bkx: Mycobacterium tuberculosis encapsulin in complex with DyP
Classification: PROTEIN BINDING
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2024-04-29
Authors: Cuthbert, B.J., Batot, G.O., Contreras, H., Chen, X., Burley, K.H., Goulding, C.W.
PDB entry 9bky: Crystal structure of a C2 domain from Trichomonas vaginalis (sulfate bound)
Classification: LIPID BINDING PROTEIN
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2024-04-29
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9bkz: Crystal Structure of Dephospho-CoA kinase from Klebsiella aerogenes (CoA and ADP bound)
Classification: TRANSFERASE
Source organism: Klebsiella aerogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-04-29
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9bl0: KRAS G12D Mutant KRAS 1-169 at 298 K bound to MRTX-1133
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-04-29
Authors: Xu, M., Deck, S.L., Milano, S.K., Aplin, C., Cerione, R.A.
PDB entry 9bl1: Crystal structure of heme-binding protein from Populus trichocarpa
Classification: METAL BINDING PROTEIN
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-04-29
Authors: Kumaran, D., Grosjean, N., Blaby, E.C.
PDB entry 9bl2: KIR3DL1*001 in complex with HLA-B*57:03 presenting the AW10 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-04-29
Authors: Faoro, C., Rossjohn, J.
PDB entry 9bl3: KIR3DL1*114 in complex with HLA-B*57:03 presenting the AW10 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-04-29
Authors: Faoro, C., Rossjohn, J.
PDB entry 9bl4: KIR3DL1*086 in complex with HLA-B*57:03 presenting the AW10 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-04-29
Authors: Faoro, C., Rossjohn, J.
PDB entry 9bl5: KIR3DL1*001 in complex with HLA-A*24:02 presenting the TW9 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-04-29
Authors: Faoro, C., Rossjohn, J.
PDB entry 9bl6: KIR3DL1*114 in complex with HLA-A*24:02 presenting the TW9 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-04-29
Authors: Faoro, C., Rossjohn, J.
PDB entry 9bl7: Mycobacterium tuberculosis efpA parallel dimer
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2024-04-29
Authors: Khandelwal, N.K., Gupta, M., Stroud, R.M.
PDB entry 9bl8: MIT (L7C/A43C) Domain of Vps4p
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-04-29
Authors: Wienkers, H.J., Han, H., Whitby, F.G., Hill, C.P.
PDB entry 9bl9: KIR3DL1*114 in complex with HLA-A*24:02 presenting the NEF peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-04-29
Authors: Faoro, C., Rossjohn, J.
PDB entry 9bla: KIR3DL1*086 in complex with HLA-A*24:02 presenting the NEF peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-04-30
Authors: Faoro, C., Rossjohn, J.
PDB entry 9blb: Human Calcitonin Receptor in Complex with Gs and Cagrilintide Backbone (non-acylated) in bypass conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-04-30
Authors: Cao, J., Belousoff, M.J., Wootten, D.L., Sexton, P.M.
PDB entry 9blc: Human Calcitonin Receptor in Complex with Gs and Cagrilintide Backbone (non-acylated) in CT-like conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-04-30
Authors: Cao, J., Belousoff, M.J., Wootten, D.L., Sexton, P.M.
PDB entry 9bld: crystal structure of thermostable dienelactone hydrolase
Classification: HYDROLASE
Source organism: Hydrogenobacter thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-04-30
Authors: Muniz, J.R.C., Almeida, D., Brito, V., Ciancaglini, I., Sandano, A.L.H., Squina, F., Garcia, W.
PDB entry 9ble: Crystal structure of thermostable dienelactone hydrolase. Monoclinic space group.
Classification: HYDROLASE
Source organism: Hydrogenobacter thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-04-30
Authors: Muniz, J.R.C., Almeida, D., Brito, V., Ciancaglini, I., Sandano, A.L.H., Squina, F., Garcia, W.
PDB entry 9blf: SARS-CoV-2 core polymerase complex inhibited by araCTP
Classification: VIRAL PROTEIN/RNA/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-04-30
Authors: Anderson, T.K., Xiao, Z., Kirchdeorfer, R.N.
PDB entry 9blg: Crystal structure of non-receptor protein tyrosine phosphatase SHP2 in complex with PF-07284892
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-04-30
Authors: Bester, S.M., Wu, W.-I., Mou, T.-C.
PDB entry 9blh: Crystal structure of calcium/calmodulin-dependent protein kinase type II subunit delta complexed with ribociclib
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-04-30
Authors: Tomchick, D.R., Majumdar, A., Tagliabracci, V.
PDB entry 9bli: Crystal structure of Actin capping protein in complex with a fragment of Legionella pneumophila RavB
Classification: PROTEIN BINDING
Source organism: Gallus gallus; Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-04-30
Authors: Ye, J.S., Majumdar, A., Tomchick, D.R., Tagliabracci, V.S.
PDB entry 9blj: Crystal structure of a serine protease inhibitor HPI from Hevea brasiliensis
Classification: PLANT PROTEIN
Source organism: Hevea brasiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2024-04-30
Authors: Rodriguez-Romero, A., Hernandez-Santoyo, A.
PDB entry 9blk: HCoV-OC43 Spike glycoprotein
Classification: VIRAL PROTEIN
Source organism: Human coronavirus OC43
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-04-30
Authors: Torrents de la Pena, A., Sewall, L.M., Ward, A.B.
PDB entry 9bll: Cryo-EM of RBD(EG5.1)/1301B7 Fab Complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-04-30
Authors: Walter, M.R., Green, T.J.
PDB entry 9blm: Structure of West Nile Virus 3'- stem-loop_68NTS
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2024-04-30
Authors: Zhu, Y., Chaubey, B., Seattle Structural Genomics Center for Infectious Disease (SSGCID)