LiteFold/PDB huggingface dataset:
PDB entry 8chn: The FK1 domain of FKBP51 in complex with (1S,5S,6R)-10-((S)-(3,5-dichlorophenyl)sulfonimidoyl)-3-(pyridin-2-ylmethyl)-5-vinyl-3,10-diazabicyclo[4.3.1]decan-2-one
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2023-02-08
Authors: Meyners, C., Purder, P.L., Hausch, F.
PDB entry 8cho: CRYSTAL STRUCTURE OF DELTA5-3-KETOSTEROID ISOMERASE FROM PSEUDOMONAS TESTOSTERONI
Classification: ISOMERASE
Source organism: Comamonas testosteroni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1998-01-06
Authors: Cho, H.-S., Oh, B.-H.
PDB entry 8chp: The FK1 domain of FKBP51 in complex with (1S,5S,6R)-10-((S)-(3,5-dichlorophenyl)sulfinyl)-3-(pyridin-2-ylmethyl)-5-vinyl-3,10-diazabicyclo[4.3.1]decan-2-one
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2023-02-08
Authors: Meyners, C., Purder, P.L., Hausch, F.
PDB entry 8chq: The FK1 domain of FKBP51 in complex with (1S,5S,6R)-10-((S)-3,5-dichloro-N-methylphenylsulfonimidoyl)-3-(pyridin-2-ylmethyl)-5-vinyl-3,10-diazabicyclo[4.3.1]decan-2-one
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2023-02-08
Authors: Meyners, C., Purder, P.L., Hausch, F.
PDB entry 8chr: The FK1 domain of FKBP51 in complex with (1S,5S,6R)-10-((R)-(3,5-dichlorophenyl)sulfonimidoyl)-3-(pyridin-2-ylmethyl)-5-vinyl-3,10-diazabicyclo[4.3.1]decan-2-one
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2023-02-08
Authors: Meyners, C., Purder, P.L., Hausch, F.
PDB entry 8chs: Human heparan sulfate N-deacetylase-N-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate and nanobody nAb13 (composite map and model).
Classification: CARBOHYDRATE
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2023-02-08
Authors: Mycroft-West, C.J., Wu, L.
PDB entry 8cht: Crystal structure of human PURA (fragment Glu57-Glu212, PUR repeat I and II)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-02-08
Authors: Janowski, R., Niessing, D.
PDB entry 8chu: Crystal structure of human PURA repeat I-II K97E mutant
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-02-08
Authors: Janowski, R., Niessing, D.
PDB entry 8chv: Crystal structure of human PURA (fragment Glu57-Glu212, PUR repeat I and II) R140P mutant
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-02-08
Authors: Janowski, R., Niessing, D.
PDB entry 8chw: Crystal structure of human PURA (fragment Pro216-Lys280, PUR repeat III)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-02-08
Authors: Janowski, R., Niessing, D.
PDB entry 8chx: Structure and function of LolA from Vibrio cholerae
Classification: LIPID TRANSPORT
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-08
Authors: Jaiman, D., Nagampalli, R., Persson, K.
PDB entry 8chy: Crystal structure of an 8-repeat consensus TPR superhelix with Zinc.
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-02-08
Authors: Liutkus, M., Rojas, A.L., Cortajarena, A.L.
PDB entry 8ci0: Maize Transketolase in complex with TPP and hydrolyzed (+)-Cornexistin
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.902 Å
Deposited: 2023-02-08
Authors: Freigang, J.
PDB entry 8ci1: Human alpha7 nicotinic receptor in complex with the E3 nanobody and nicotine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-02-08
Authors: Prevost, M.S., Barilone, N., Dejean de la Batie, G., Pons, S., Ayme, G., England, P., Gielen, M., Bontems, F., Pehau-Arnaudet, G., Maskos, U., Lafaye, P., Corringer, P.-J.
PDB entry 8ci2: human alpha7 nicotinic receptor in complex with the C4 nanobody under sub-saturating conditions
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-02-08
Authors: Prevost, M.S., Barilone, N., Dejean de la Batie, G., Pons, S., Ayme, G., England, P., Gielen, M., Bontems, F., Pehau-Arnaudet, G., Maskos, U., Lafaye, P., Corringer, P.-J.
PDB entry 8ci3: Structure of bovine CD46 ectodomain (SCR 1-2)
Classification: IMMUNE SYSTEM
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2023-02-08
Authors: Aitkenhead, H., David I Stuart, D.I., El Omari, K.
PDB entry 8ci4: Crystal structure of doubly S-methanethiolated rabbit M-type creatine kinase
Classification: CYTOSOLIC PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-02-08
Authors: Joergensen, M.H., Andersen, D.G., Andersen, G.R.
PDB entry 8ci5: Structure of the SNV L protein bound to 5' RNA
Classification: VIRAL PROTEIN
Source organism: Sin Nombre orthohantavirus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-02-08
Authors: Meier, K., Thorkelsson, S.R., Durieux Trouilleton, Q., Vogel, D., Yu, D., Kosinski, J., Cusack, S., Malet, H., Grunewald, K., Quemin, E.R.J., Rosenthal, M.
PDB entry 8ci6: PBP AccA from A. vitis S4 in complex with D-glucose-2-phosphate (G2P)
Classification: TRANSPORT PROTEIN
Source organism: Allorhizobium ampelinum S4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.199 Å
Deposited: 2023-02-08
Authors: Morera, S., Vigouroux, A.
PDB entry 8ci7: Apo-crystal structure of a wild-type South African HIV-1 subtype C protease at 2.4 angstrom
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-02-09
Authors: Dlamini, N.P., Pandian, R., Onisuru, O., Achilonu, I.A., Sayed, Y.
PDB entry 8ci8: Cryo-EM structure of the Nup98(298-327) fibril
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2023-02-09
Authors: Ibanez de Opakua, A., Cima-Omori, S., Dienemann, C., Zweckstetter, M.
PDB entry 8ci9: Deoxypodophyllotoxin Synthase in complex with Tris
Classification: OXIDOREDUCTASE
Source organism: Sinopodophyllum hexandrum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2023-02-09
Authors: Ingold, Z., Lichman, B., Grogan, G.
PDB entry 8cia: Crystal structure of the kelch domain of human KLHL20
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.72 Å
Deposited: 2023-02-09
Authors: Sweeney, M.N., Bradshaw, W.J., Chen, Z., Bullock, A.N.
PDB entry 8cib: Structural and functional analysis of the Pseudomonas aeruginosa PA1677 protein
Classification: UNKNOWN FUNCTION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2023-02-09
Authors: Sonnleitner, E., Brear, P., Luisi, B.F., Blasi, U.
PDB entry 8cic: Crystal structure of stabilized A2A adenosine receptor A2AR-StaR2-bRIL in complex with clinical candidate Etrumadenant
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2023-02-09
Authors: Cheng, R.K.Y., Markovic-Mueller, S., Hennig, M.
PDB entry 8cid: Crystal structure of Oryza sativa UAM 2
Classification: UNKNOWN FUNCTION
Source organism: Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2023-02-09
Authors: Fredslund, F., Adams, P.D., Welner, D.H.
PDB entry 8cie: Crystal structure of the human CDKL5 kinase domain with compound YL-354
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-02-09
Authors: Richardson, W., Chen, X., Newman, J.A., Bakshi, S., Lakshminarayana, B., Brooke, L., Bullock, A.N.
PDB entry 8cif: Bovine naive ultralong antibody AbD08 collected at 293K
Classification: IMMUNE SYSTEM
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-02-09
Authors: Clarke, J.D., Mikolajek, H., Stuart, D.I., Owens, R.J.
PDB entry 8cig: Crystal structure of an 8-repeat consensus TPR superhelix in tris Buffer with Calcium.
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-02-09
Authors: Liutkus, M., Rojas, A.L., Cortajarena, A.L.
PDB entry 8cih: Structure of FL CINP
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-02-09
Authors: Foglizzo, M., Zeqiraj, E.
PDB entry 8cii: Delta-RBD complex with BA.2-07 fab, SARS1-34 fab and C1 nanobody
Classification: VIRUS
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-02-09
Authors: Duyvesteyn, H.M.E., Ren, J., Stuart, D.I., Fry, E.E.
PDB entry 8cij: CRYSTAL STRUCTURE OF HUMAN HPK1 (MAP4K1) COMPLEX WITH 2-[8-Amino-7-fluoro-6-(8-methyl-2,3-dihydro-1H-pyrido[2,3-b][1,4]oxazin-7-yl)-isoquinolin-3-ylamino]-6-isopropyl-5,6-dihydro-4H-1,6,8a-triaza-azulen-7-one
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.821 Å
Deposited: 2023-02-09
Authors: Musil, D., Toure, M.
PDB entry 8cik: Altai wapiti (Cervus elaphus sibiricus) chymosin at 2.2 A resolution
Classification: HYDROLASE
Source organism: Cervus canadensis sibiricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2023-02-09
Authors: Diusenova, S.E., Shevtsov, M.B., Borshchevskiy, V.I., Belenkaya, S.V., Kolybalov, D.S., Arkhipov, S.G., Volosnikova, E.A., Elchaninov, V.V., Shcherbakov, D.N.
PDB entry 8cil: Crystal structure of Coxiella burnetii Fic protein 2
Classification: LIGASE
Source organism: Coxiella burnetii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-02-10
Authors: Hoepfner, D., Itzen, A., Pogenberg, V.
PDB entry 8cim: BA.2-07 FAB IN COMPLEX WITH SARS-COV-2 BA.2.12.1 SPIKE GLYCOPROTEIN
Classification: VIRUS
Source organism: Enterobacteria phage T4; Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-02-10
Authors: Duyvesteyn, H.M.E., Ren, J., Stuart, D.I., Fry, E.E.
PDB entry 8cin: BA.4/5-5 FAB IN COMPLEX WITH SARS-COV-2 BA.4 SPIKE GLYCOPROTEIN
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-02-10
Authors: Duyvesteyn, H.M.E., Ren, J., Stuart, D.I., Fry, E.E.
PDB entry 8cio: Cryo-EM structure of the CupE pilus from Pseudomonas aeruginosa
Classification: PROTEIN FIBRIL
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-02-10
Authors: Boehning, J., Bharat, T.A.M.
PDB entry 8cip: Crystal structure of transketolase from Geobacillus stearothermophilus
Classification: TRANSFERASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-10
Authors: Leogrande, C., Rabe von Pappenheim, F., Tittmann, K.
PDB entry 8ciq: JzTx-34 toxin peptide
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-10
Authors: Landon, C., Meudal, H.
PDB entry 8cir: The FERM domain of human moesin with a bound peptide identified by phage display
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-02-10
Authors: Bradshaw, W.J., Katis, V.L., Leisner, T.M., Fairhead, M., Bountra, C., von Delft, F., Pearce, K.H., Brennan, P.E.
PDB entry 8cis: The FERM domain of human moesin with two bound peptides identified by phage display
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2023-02-10
Authors: Bradshaw, W.J., Katis, V.L., Leisner, T.M., Fairhead, M., Bountra, C., von Delft, F., Pearce, K.H., Brennan, P.E.
PDB entry 8cit: The FERM domain of human moesin mutant L281R
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.536 Å
Deposited: 2023-02-10
Authors: Bradshaw, W.J., Katis, V.L., Koekemoer, L., Bountra, C., von Delft, F., Brennan, P.E.
PDB entry 8ciu: The FERM domain of human moesin mutant H288A
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.393 Å
Deposited: 2023-02-10
Authors: Bradshaw, W.J., Katis, V.L., Koekemoer, L., Bountra, C., von Delft, F., Brennan, P.E.
PDB entry 8civ: Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
Classification: RIBOSOME
Source organism: Escherichia coli; Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2023-02-10
Authors: Milicevic, N., Jenner, L., Myasnikov, A., Yusupov, M., Yusupova, G.
PDB entry 8ciw: Methylsuccinyl-CoA dehydrogenase from Pseudomonas migulae with bound FAD and (2S)-methylsuccinyl-CoA
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas migulae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-02-10
Authors: Zarzycki, J., McLean, R., Erb, T.J.
PDB entry 8cix: DNA-polymerase sliding clamp (DnaN) from Escherichia coli in complex with Griselimycin.
Classification: TRANSFERASE
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-02-11
Authors: Fu, C., Liu, Y., Walt, C., Bader, C., Rasheed, S., Lukat, P., Neuber, M., Blankenfeldt, W., Kalinina, O., Mueller, R.
PDB entry 8ciy: DNA-polymerase sliding clamp (DnaN) from Escherichia coli in complex with Cyclohexyl-Griselimycin.
Classification: TRANSFERASE
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-02-11
Authors: Fu, C., Liu, Y., Walt, C., Bader, C., Rasheed, S., Lukat, P., Neuber, M., Blankenfeldt, W., Kalinina, O., Mueller, R.
PDB entry 8ciz: DNA-polymerase sliding clamp (DnaN) from Escherichia coli in complex with Mycoplanecin A.
Classification: TRANSFERASE
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2023-02-11
Authors: Fu, C., Liu, Y., Walt, C., Bader, C., Rasheed, S., Lukat, P., Neuber, M., Blankenfeldt, W., Kalinina, O., Mueller, R.
PDB entry 8cj0: E. coli NfsB-T41Q/N71S/F124T/M127V mutant bound to nicotinate
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-02-11
Authors: White, S.A., Hyde, E.I., Day, M.A.
PDB entry 8cj1: Urea-based foldamer inhibitor c3u_3 chimera in complex with ASF1 histone chaperone
Classification: CHAPERONE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.564 Å
Deposited: 2023-02-11
Authors: Perrin, M.E., Li, B., Mbianda, J., Ropars, V., Legrand, P., Douat, C., Ochsenbein, F., Guichard, G.
PDB entry 8cj2: Urea-based foldamer inhibitor c3u_5 chimera in complex with ASF1 histone chaperone
Classification: CHAPERONE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.127 Å
Deposited: 2023-02-11
Authors: Perrin, M.E., Li, B., Mbianda, J., Ropars, V., Legrand, P., Douat, C., Ochsenbein, F., Guichard, G.
PDB entry 8cj3: Urea-based foldamer inhibitor c3u_7 chimera in complex with ASF1 histone chaperone
Classification: CHAPERONE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-02-11
Authors: Perrin, M.E., Li, B., Mbianda, J., Ropars, V., Legrand, P., Douat, C., Ochsenbein, F., Guichard, G.
PDB entry 8cj4: Crystal structure of ClpP from Staphylococcus epidermidis, tetradecamer
Classification: HYDROLASE
Source organism: Staphylococcus epidermidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-02-12
Authors: Alves Franca, B., Rohde, H., Betzel, C.
PDB entry 8cj5: Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 A651V mutant with bound phosphate
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.00135 Å
Deposited: 2023-02-12
Authors: Haesaerts, S., Loris, R., Larsen, P.
PDB entry 8cj7: HDAC6 selective degraded (difluoromethyl)-1,3,4-oxadiazole substrate inhibitor
Classification: HYDROLASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2023-02-12
Authors: Sandmark, J., Ek, M., Ripa, L.
PDB entry 8cj8: Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 mutant A651V in complex with L-malate
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.48992 Å
Deposited: 2023-02-12
Authors: Haesaerts, S., Loris, R., Larsen, P.B.
PDB entry 8cj9: Crystal structure of maize CKO/CKX8 in complex with urea-derived inhibitor 2-[(3,5-dichlorophenyl)carbamoylamino]benzamide
Classification: FLAVOPROTEIN
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-02-12
Authors: Kopecny, D., Briozzo, P., Morera, S.
PDB entry 8cja: A225L/F231A variant of the CODH/ACS complex of C. hydrogenoformans
Classification: OXIDOREDUCTASE
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-13
Authors: Ruickoldt, J., Jeoung, J., Lennartz, F., Dobbek, H.
PDB entry 8cjb: A268M variant of the CODH/ACS complex of C. hydrogenoformans
Classification: OXIDOREDUCTASE
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-02-13
Authors: Ruickoldt, J., Jeoung, J., Lennartz, F., Dobbek, H.
PDB entry 8cjc: F515A variant of the CODH/ACS complex of C. hydrogenoformans
Classification: OXIDOREDUCTASE
Source organism: Carboxydothermus hydrogenoformans Z-2901
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2023-02-13
Authors: Ruickoldt, J., Jeoung, J., Lennartz, F., Dobbek, H.
PDB entry 8cjd: AetF, a single-component flavin-dependent tryptophan halogenase
Classification: FLAVOPROTEIN
Source organism: Aetokthonos hydrillicola Thurmond2011
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-02-13
Authors: Gafe, S., Niemann, H.H.
PDB entry 8cje: AetF, a single-component flavin-dependent tryptophan halogenase, in complex with L-tryptophan
Classification: FLAVOPROTEIN
Source organism: Aetokthonos hydrillicola Thurmond2011
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-13
Authors: Gafe, S., Niemann, H.H.
PDB entry 8cjf: AetF, a single-component flavin-dependent tryptophan halogenase, in complex with 5-bromo-L-tryptophan
Classification: FLAVOPROTEIN
Source organism: Aetokthonos hydrillicola Thurmond2011
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-02-13
Authors: Gafe, S., Niemann, H.H.
PDB entry 8cjg: AetF, a single-component flavin-dependent tryptophan halogenase, in complex with 7-bromo-L-tryptophan
Classification: FLAVOPROTEIN
Source organism: Aetokthonos hydrillicola Thurmond2011
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-02-13
Authors: Gafe, S., Niemann, H.H.
PDB entry 8cjh: Architecture of a PKS-NRPS hybrid megaenzyme involved in the biosynthesis of the genotoxin colibactin
Classification: BIOSYNTHETIC PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.982 Å
Deposited: 2023-02-13
Authors: Bonhomme, S., Dessen, A., Macheboeuf, P.
PDB entry 8cji: Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-07-052
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-02-13
Authors: Schuetz, A., Mallow, K., Nazare, M., Specker, E., Heinemann, U.
PDB entry 8cjj: Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-06-057
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66416 Å
Deposited: 2023-02-13
Authors: Schuetz, A., Mallow, K., Nazare, M., Specker, E., Heinemann, U.
PDB entry 8cjk: Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-06-098
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45915 Å
Deposited: 2023-02-13
Authors: Schuetz, A., Mallow, K., Nazare, M., Specker, E., Heinemann, U.
PDB entry 8cjl: Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor TPT-004
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-02-13
Authors: Schuetz, A., Mallow, K., Nazare, M., Specker, E., Heinemann, U.
PDB entry 8cjm: Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-07-047
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-02-13
Authors: Schuetz, A., Mallow, K., Nazare, M., Specker, E., Heinemann, U.
PDB entry 8cjn: Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-06-070
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68081 Å
Deposited: 2023-02-13
Authors: Schuetz, A., Mallow, K., Nazare, M., Specker, E., Heinemann, U.
PDB entry 8cjo: Crystal structure of human tryptophan hydroxylase 1 in complex with inhibitor KM-06-004
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86634 Å
Deposited: 2023-02-13
Authors: Schuetz, A., Mallow, K., Nazare, M., Specker, E., Heinemann, U.
PDB entry 8cjp: JzTx-34 toxin peptide H18A mutant
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-13
Authors: Landon, C., Meudal, H.
PDB entry 8cjq: JzTx-34 toxin peptide E20A mutant
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-13
Authors: Landon, C., Meudal, H.
PDB entry 8cjr: JzTx-34 toxin peptide W25A mutant
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-13
Authors: Landon, C., Meudal, H.
PDB entry 8cjs: JzTx-34 toxin peptide W31A mutant
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-13
Authors: Landon, C., Meudal, H.
PDB entry 8cjt: JzTx-34 toxin peptide W33A mutant
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-13
Authors: Landon, C., Meudal, H.
PDB entry 8cju: PBP AccA from A. vitis S4 in complex with agrocin84
Classification: TRANSPORT PROTEIN
Source organism: Allorhizobium ampelinum S4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.349 Å
Deposited: 2023-02-13
Authors: Morera, S., Vigouroux, A.
PDB entry 8cjv: Structure of bovine CD46 ectodomain (SCR 1-4)
Classification: IMMUNE SYSTEM
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2023-02-13
Authors: Aitkenhead, H., Stuart, D.I., El Omari, K.
PDB entry 8cjw: Nucleoprotein Thogotovirus delta188-196
Classification: VIRAL PROTEIN
Source organism: Thogotovirus thogotoense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-02-13
Authors: Dick, A., Roske, Y.
PDB entry 8cjy: [FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant S357T
Classification: OXIDOREDUCTASE
Source organism: Clostridium pasteurianum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-02-13
Authors: Brocks, C., Duan, J., Hofmann, E., Happe, T.
PDB entry 8cjz: Carin1 bacteriophage mature capsid
Classification: VIRUS
Source organism: Bacteriophage sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-02-14
Authors: d'Acapito, A., Neumann, E., Schoehn, G.
PDB entry 8ck0: Carin1 bacteriophage portal assembly
Classification: VIRUS
Source organism: Bacteriophage sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-02-14
Authors: d'Acapito, A., Neumann, E., Schoehn, G.
PDB entry 8ck1: Carin 1 bacteriophage tail, connector and tail fibers assembly
Classification: VIRUS
Source organism: Bacteriophage sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-02-14
Authors: d'Acapito, A., Neumann, E., Schoehn, G.
PDB entry 8ck2: MUC2 CysD1 G1352S
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-02-14
Authors: Khmelnitsky, L., Fass, D.
PDB entry 8ck3: STRUCTURE OF HIF2A-ARNT HETERODIMER IN COMPLEX WITH (S)-1-(3,5-Difluoro-phenyl)-5,5-difluoro-3-methanesulfonyl-5,6-dihydro-4H-cyclopenta[c]thiophen-4-ol
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.707 Å
Deposited: 2023-02-14
Authors: Musil, D., Lehmannn, M., Diehl, L.
PDB entry 8ck4: STRUCTURE OF HIF2A-ARNT HETERODIMER IN COMPLEX WITH (4S)-1-(3,5-difluorophenyl)-5,5-difluoro-3-methanesulfonyl-4,5,6,7-tetrahydro-2-benzothiophen-4-ol
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2023-02-14
Authors: Musil, D.
PDB entry 8ck5: VDR LBD complex with 25-nitro derivative of 1,25D3
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-14
Authors: Rochel, N.
PDB entry 8ck6: Crystal structure of maize CKO/CKX8 in complex with urea-derived inhibitor 2-[(3,5-dichlorophenyl)carbamoylamino]-4-methoxy-benzamide
Classification: FLAVOPROTEIN
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-02-14
Authors: Kopecny, D., Briozzo, P., Morera, S.
PDB entry 8ck7: Avidin complexed to theophylline
Classification: PROTEIN BINDING
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-02-14
Authors: De March, M.
PDB entry 8ck8: STRUCTURE OF HIF2A-ARNT HETERODIMER IN COMPLEX WITH (S)-1-Cyclohexyloxy-5,5-difluoro-3-methanesulfonyl-5,6-dihydro-4H-cyclopenta[c]thiophen-4-ol
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.302 Å
Deposited: 2023-02-14
Authors: Musil, D.
PDB entry 8ck9: DyP-type peroxidase from Thermobifida halotolerans
Classification: OXIDOREDUCTASE
Source organism: Thermobifida halotolerans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-02-14
Authors: Pupart, H., Lukk, T.
PDB entry 8cka: Deinococcus radidurans HPI S-layer
Classification: STRUCTURAL PROTEIN
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2023-02-14
Authors: von Kuegelgen, A., Yamashita, K., Murshudov, G., Bharat, T.
PDB entry 8ckb: Asymmetric reconstruction of the crAss001 virion
Classification: VIRUS
Source organism: Bacteroides phage crAss001
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.39 Å
Deposited: 2023-02-16
Authors: Bayfield, O.W., Shkoporov, A.N., Yutin, N., Khokhlova, E.V., Smith, J.L.R., Hawkins, D.E.D.P., Koonin, E.V., Hill, C., Antson, A.A.
PDB entry 8ckc: Vitamin D receptor complex with 25-amine derivative of 1,25D3
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-15
Authors: Rochel, N.
PDB entry 8ckd: PBP AccA from A. fabrum C58 in complex with agrocinopine D-like
Classification: TRANSPORT PROTEIN
Source organism: Agrobacterium fabrum str. C58
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-02-15
Authors: Morera, S., Vigouroux, A.
PDB entry 8cke: PBP AccA from A.tumefaciens C58 in complex with agrocinopine A in space group I222
Classification: TRANSPORT PROTEIN
Source organism: Agrobacterium fabrum str. C58
Experimental method: X-RAY DIFFRACTION
Resolution: 1.298 Å
Deposited: 2023-02-15
Authors: Morera, S., Vigouroux, A.
PDB entry 8ckf: Crystal Structure of the first bromodomain of human BRD4 L94C variant in complex with racemic 3,5-dimethylisoxazol ligand
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-02-15
Authors: Thomas, A.M., McDonough, M.A., Schiedel, M., Conway, S.J.
PDB entry 8ckg: Semaphorin-5A TSR 3-4 domains in complex with sulfate
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.714 Å
Deposited: 2023-02-15
Authors: Nagy, G.N., Duman, R., Harlos, K., El Omari, K., Wagner, A., Jones, E.Y.
PDB entry 8ckh: Crystal structure of IspE from Klebsiella pneumoniae
Classification: PROTEIN BINDING
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-15
Authors: Hamid, R.
PDB entry 8ckk: Semaphorin-5A TSR 3-4 domains in complex with nitrate
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-02-15
Authors: Nagy, G.N., Duman, R., Harlos, K., El Omari, K., Wagner, A., Jones, E.Y.
PDB entry 8ckl: Semaphorin-5A TSR 3-4 domains in complex with sucrose octasulfate (SOS)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2023-02-15
Authors: Nagy, G.N., Duman, R., Harlos, K., El Omari, K., Wagner, A., Jones, E.Y.
PDB entry 8ckm: Semaphorin-5A TSR 3-4 domains
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2023-02-15
Authors: Nagy, G.N., Duman, R., Harlos, K., El Omari, K., Wagner, A., Jones, E.Y.
PDB entry 8ckn: Cytochrome P450 CYP143A1 (Rv1785c) from Mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-02-16
Authors: Selvam, I.R.
PDB entry 8cko: PBP AccA from A.tumefaciens C58 in complex with agrocinopine C-like
Classification: TRANSPORT PROTEIN
Source organism: Agrobacterium fabrum str. C58
Experimental method: X-RAY DIFFRACTION
Resolution: 1.421 Å
Deposited: 2023-02-16
Authors: Morera, S., Vigouroux, A.
PDB entry 8ckp: X-ray structure of the crystallization-prone form of subfamily III haloalkane dehalogenase DhmeA from Haloferax mediterranei
Classification: UNKNOWN FUNCTION
Source organism: Haloferax mediterranei
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2023-02-16
Authors: Marek, M., Chmelova, K., Schenkmayerova, A., Croll, T., Read, R.J., Diederichs, K.
PDB entry 8ckq: Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (CKO/CKX4) in complex with inhibitor 2-[(3,5-dichlorophenyl)carbamoylamino]benzamide
Classification: FLAVOPROTEIN
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-02-16
Authors: Kopecny, D., Briozzo, P., Morera, S.
PDB entry 8ckr: Crystal structure of an 8-repeat consensus TPR superhelix with in Hepes with Ca
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-02-16
Authors: Liutkus, M., Rojas, A.L., Cortajarena, A.L.
PDB entry 8cks: Crystal structure of Human Serum Albumin in complex with FESAN
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-02-16
Authors: Dolot, R.M., Kaniowski, D., Ebenryter-Olbinska, K., Szczupak, P., Suwara, J., Nawrot, B.C.
PDB entry 8ckt: Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (CKO/CKX4) in complex with inhibitor 2-[(3,5-dichlorophenyl)carbamoylamino]-4-(trifluoromethoxy)benzamide
Classification: FLAVOPROTEIN
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-02-16
Authors: Kopecny, D., Briozzo, P., Morera, S.
PDB entry 8cku: Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin
Classification: RIBOSOME
Source organism: Escherichia coli; Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2023-02-16
Authors: Milicevic, N., Jenner, L., Myasnikov, A., Yusupov, M., Yusupova, G.
PDB entry 8ckv: HIV-1 mature capsid hexamer from CA-IP6 CLPs
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8ckw: HIV-1 mature capsid pentamer from CA-IP6 CLPs
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8ckx: HIV-1 mature capsid hexamer next to pentamer (type I) from CA-IP6 CLPs
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8cky: HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to Nup153 peptide
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8ckz: HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to Nup153 peptide
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8cl0: HIV-1 mature capsid hexamer next to pentamer (type I) from CA-IP6 CLPs bound to Nup153 peptide.
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8cl1: HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to CPSF6 peptide.
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8cl2: HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to CPSF6 peptide
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8cl3: HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to Sec24C peptide.
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8cl4: HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to Sec24C peptide
Classification: VIRUS LIKE PARTICLE
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2023-02-16
Authors: Stacey, J.C.V., Briggs, J.A.G.
PDB entry 8cl5: Lysozyme in matrix of lipidic cubic phase of monoolein (LCP)
Classification: HYDROLASE
Source organism: Asplenium bulbiferum subsp. bulbiferum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2023-02-16
Authors: Bertrand, Q., Kepa, M.W., Weinert, T., Wranik, M., Standfuss, J.
PDB entry 8cl6: Lysozyme in matrix of hydroxyethylcellulose (HEC)
Classification: HYDROLASE
Source organism: Asplenium bulbiferum subsp. bulbiferum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2023-02-16
Authors: Bertrand, Q., Kepa, M.W., Weinert, T., Wranik, M., Standfuss, J.
PDB entry 8cl7: Krokinobacter eikastus rhodopsin 2 (KR2) in dark state
Classification: MEMBRANE PROTEIN
Source organism: Dokdonia eikasta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2023-02-16
Authors: Bertrand, Q., Wranik, M., Kepa, M.W., Weinert, T., Standfuss, J.
PDB entry 8cl8: Krokinobacter eikastus rhodopsin 2 (KR2) extrapolated map 1us after light activation
Classification: MEMBRANE PROTEIN
Source organism: Dokdonia eikasta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-02-16
Authors: Bertrand, Q., Kepa, M.W., Weinert, T., Wranik, M., Standfuss, J.
PDB entry 8cl9: Tubulin-DARPin D1 complex
Classification: CELL CYCLE
Source organism: Bos taurus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-02-16
Authors: Wranik, M., Bertrand, Q., Weinert, T., Kepa, M.W., Steinmetz, M., Standfuss, J.
PDB entry 8cla: Z-SBTubA4 photoswitch bound to tubulin-DARPin D1 complex
Classification: CELL CYCLE
Source organism: Bos taurus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-02-16
Authors: Wranik, M., Bertrand, Q., Kepa, M.W., Weinert, T., Steinmetz, M., Standfuss, J.
PDB entry 8clb: Colchicine bound to tubulin (T2R-TTL) complex
Classification: CELL CYCLE
Source organism: Bos taurus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-02-16
Authors: Wranik, M., Kepa, M.W., Bertrand, Q., Weinert, T., Steinmetz, M., Standfuss, J.
PDB entry 8clc: Tubulin (T2R-TTL) complex
Classification: CELL CYCLE
Source organism: Bos taurus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-02-16
Authors: Wranik, M., Bertrand, Q., Kepa, M.W., Weinert, T., Steinmetz, M., Standfuss, J.
PDB entry 8cld: Ansamitocin P3 bound to tubulin (T2R-TTL) complex
Classification: CELL CYCLE
Source organism: Bos taurus; Mus musculus; Pavo cristatus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-02-16
Authors: Wranik, M., Kepa, M.W., Bertrand, Q., Weinert, T., Steinmetz, M., Standfuss, J.
PDB entry 8cle: Vinblastine bound to tubulin (T2R-TTL) complex
Classification: CELL CYCLE
Source organism: Bos taurus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-02-16
Authors: Wranik, M., Bertrand, Q., Kepa, M.W., Weinert, T., Steinmetz, M., Standfuss, J.
PDB entry 8clf: Z-SolQ2Br bound to tubulin (T2R-TTL) complex
Classification: CELL CYCLE
Source organism: Bos taurus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-02-16
Authors: Wranik, M., Bertrand, Q., Kepa, M., Weinert, T., Steinmetz, M., Standfuss, J.
PDB entry 8clg: Epothilone A and Colchicine bound to tubulin (T2R-TTL) complex
Classification: CELL CYCLE
Source organism: Bos taurus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-02-16
Authors: Wranik, M., Bertrand, Q., Kepa, M.W., Weinert, T., Steinmetz, M., Standfuss, J.
PDB entry 8clh: Drug cocktail (Colchicine, Epothilone A, Peloruside, Ansamitocin P3, Vinblastine) bound to tubulin (T2R-TTL) complex
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-02-16
Authors: Wranik, M., Bertrand, Q., Kepa, M.W., Weinert, T., Steinmetz, M., Standfuss, J.
PDB entry 8cli: TFIIIC TauB-DNA monomer
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-02-16
Authors: Seifert-Davila, W., Girbig, M., Hauptmann, L., Hoffmann, T., Eustermann, S., Mueller, C.W.
PDB entry 8clj: TFIIIC TauB-DNA dimer
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-02-16
Authors: Seifert-Davila, W., Girbig, M., Hauptmann, L., Hoffmann, T., Eustermann, S., Mueller, C.W.
PDB entry 8clk: TFIIIC TauA complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-02-16
Authors: Seifert-Davila, W., Girbig, M., Hauptmann, L., Hoffmann, T., Eustermann, S., Mueller, C.W.
PDB entry 8cll: Structural insights into human TFIIIC promoter recognition
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-02-16
Authors: Seifert-Davila, W., Girbig, M., Hauptmann, L., Hoffmann, T., Eustermann, S., Mueller, C.W.
PDB entry 8clm: 1.80 A crystal structure of RNA/2'-O-methyl-RNA heteroduplex
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-16
Authors: Dolot, R.M., Maciaszek, A., Nawrot, B.C.
PDB entry 8cln: Zearalenone lactonase from Streptomyces coelicoflavus, SeMet derivative for SAD phasing
Classification: HYDROLASE
Source organism: Streptomyces coelicoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-02-17
Authors: Puehringer, D., Grishkovskaya, I., Mlynek, G., Kostan, J.
PDB entry 8clo: Zearalenone lactonase from Streptomyces coelicoflavus
Classification: HYDROLASE
Source organism: Streptomyces coelicoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-02-17
Authors: Puehringer, D., Grishkovskaya, I., Mlynek, G., Kostan, J.
PDB entry 8clp: Zearalenone lactonase from Streptomyces coelicoflavus mutant H286Y
Classification: HYDROLASE
Source organism: Streptomyces coelicoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-02-17
Authors: Puehringer, D., Mlynek, G.
PDB entry 8clq: Zearalenone lactonase of Streptomyces coelicoflavus mutant H286Y in complex with hydrolyzed zearalenone
Classification: HYDROLASE
Source organism: Streptomyces coelicoflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2023-02-17
Authors: Puehringer, D., Mlynek, G.
PDB entry 8clr: Integrated NMR/MD structure determination of a dynamic and thermodynamically stable CUUG RNA tetraloop
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2023-02-17
Authors: Oxenfarth, A., Kuemmerer, F., Bottaro, S., Schnieders, R., Pinter, G., Jonker, H.R.A., Fuertig, B., Richter, C., Blackledge, M., Lindorff-Larsen, K., Schwalbe, H.
PDB entry 8cls: Drosophila melanogaster insulin receptor ectodomain in complex with DILP5
Classification: SIGNALING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-02-17
Authors: Viola, C.M., Brzozowski, A.M., Shafi, T.
PDB entry 8clt: Zearalenone lactonase of Rhodococcus erythropolis
Classification: HYDROLASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2023-02-17
Authors: Puehringer, D., Mlynek, G.
PDB entry 8clu: Zearalenone lactonase from Rhodococcus erythropolis in complex with zearalactamenone
Classification: HYDROLASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-17
Authors: Puehringer, D.
PDB entry 8clv: Zearalenone lactonase of Rhodococcus erythropolis in complex with hydrolyzed zearalenone
Classification: HYDROLASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2023-02-17
Authors: Puehringer, D.
PDB entry 8clw: Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (CKO/CKX4) in complex with inhibitor 2-[(3,5-dichlorophenyl)carbamoylamino]-4-methoxy-benzamide
Classification: FLAVOPROTEIN
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-17
Authors: Kopecny, D., Briozzo, P., Morera, S.
PDB entry 8cly: Crystal structure of Rhizobium etli constitutive L-asparaginase ReAIV (tetragonal form R4tP)
Classification: HYDROLASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.503 Å
Deposited: 2023-02-17
Authors: Loch, J.I., Worsztynowicz, P., Sliwiak, J., Imiolczyk, B., Grzechowiak, M., Gilski, M., Jaskolski, M.
PDB entry 8clz: Crystal structure of Rhizobium etli constitutive L-asparaginase ReAIV (monoclinic form R4mC-2)
Classification: HYDROLASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.501 Å
Deposited: 2023-02-17
Authors: Loch, J.I., Worsztynowicz, P., Sliwiak, J., Imiolczyk, B., Grzechowiak, M., Gilski, M., Jaskolski, M.
PDB entry 8cm0: Rhs2-CT endonuclease toxin in complex with cognate immunity protein RhsI2
Classification: ANTIMICROBIAL PROTEIN
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2023-02-17
Authors: Pankov, G., Hunter, W.N., Coulthurst, S.J.
PDB entry 8cm1: Lol B - Localization of lipoprotein B from Vibrio cholera
Classification: PROTEIN TRANSPORT
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2023-02-17
Authors: Jaiman, D., Persson, K.
PDB entry 8cm2: Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (CKO/CKX4) in complex with inhibitor 2-[[3,5-dichloro-2-(2-hydroxyethyl)phenyl]carbamoylamino]-4-(trifluoromethoxy)benzamide
Classification: FLAVOPROTEIN
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-02-17
Authors: Kopecny, D., Briozzo, P., Morera, S.
PDB entry 8cm3: Solution structure of Mu3.1 from Conus mucronatus
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-17
Authors: Lushpa, V.A., Mineev, K.S., Vassilevski, A.A., Koroev, D.O.
PDB entry 8cm4: W-formate dehydrogenase C872A from Desulfovibrio vulgaris - exposed to oxygen
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-02-17
Authors: Vilela-Alves, G., Mota, C., Klymanska, K., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8cm5: W-formate dehydrogenase C872A from Desulfovibrio vulgaris
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-02-17
Authors: Vilela-Alves, G., Mota, C., Klymanska, K., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8cm6: W-formate dehydrogenase C872A from Desulfovibrio vulgaris - with Formamide
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.416 Å
Deposited: 2023-02-17
Authors: Vilela-Alves, G., Mota, C., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8cm7: W-formate dehydrogenase M405A from Desulfovibrio vulgaris
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 2.117 Å
Deposited: 2023-02-17
Authors: Vilela-Alves, G., Mota, C., Oliveira, A.R., Manuel, R.R., Pereira, I.C., Romao, M.J.
PDB entry 8cm9: Structure of human O-GlcNAc transferase in complex with UDP and tP11
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-02-18
Authors: Meek, R.W., Davies, G.J.
PDB entry 8cma: SARS-CoV-2 Delta-RBD complexed with BA.4/5-35 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2023-02-18
Authors: Zhou, D., Ren, J., Stuart, D.I.