LiteFold/PDB huggingface dataset:
PDB entry 2zrb: MsRecA Q196E Form II'
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrc: MsRecA Q196N Form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrd: MsRecA Q196N ADP form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zre: MsRecA Q196N ATPgS form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrf: MsRecA Q196N dATP form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrg: MsRecA Q196N dATP form II'
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrh: MsRecA Q196A form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zri: MsRecA Q196A ADP form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrj: MsRecA Q196A ATPgS form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrk: MsRecA Q196A dATP form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrl: MsRecA Q196A dATP FORM II'
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrm: MsRecA dATP form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrn: MsRecA Form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zro: MsRecA ADP form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrp: MsRecA dATP form II'
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zrq: Crystal structure of S324A-subtilisin
Classification: HYDROLASE
Source organism: Pyrococcus kodakaraensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2008-08-28
Authors: Tanaka, S., Takeuchi, Y., Matsumura, H., Koga, Y., Takano, K., Kanaya, S.
PDB entry 2zrr: Crystal structure of an immunity protein that contributes to the self-protection of bacteriocin-producing Enterococcus mundtii 15-1A
Classification: ANTIMICROBIAL PROTEIN
Source organism: Enterococcus mundtii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-08-30
Authors: Jeon, H.J., Noda, M., Matoba, Y., Kumagai, T., Sugiyama, M.
PDB entry 2zrs: Crystal structure of Ca2+-bound form of des3-23ALG-2
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-09-01
Authors: Suzuki, H., Kawasaki, M., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
PDB entry 2zrt: Crystal structure of Zn2+-bound form of des3-23ALG-2
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-09-01
Authors: Suzuki, H., Kawasaki, M., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
PDB entry 2zru: Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN
Classification: ISOMERASE
Source organism: Sulfolobus shibatae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-01
Authors: Unno, H., Yamashita, S., Ikeda, Y., Sekiguchi, S., Yoshida, N., Yoshimura, T., Kusunoki, M., Nakayama, T., Nishino, T., Hemmi, H.
PDB entry 2zrv: Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN.
Classification: ISOMERASE
Source organism: Sulfolobus shibatae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-01
Authors: Unno, H., Yamashita, S., Ikeda, Y., Sekiguchi, S., Yoshida, N., Yoshimura, T., Kusunoki, M., Nakayama, T., Nishino, T., Hemmi, H.
PDB entry 2zrw: Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN and IPP.
Classification: ISOMERASE
Source organism: Sulfolobus shibatae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-09-01
Authors: Unno, H., Yamashita, S., Ikeda, Y., Sekiguchi, S., Yoshida, N., Yoshimura, T., Kusunoki, M., Nakayama, T., Nishino, T., Hemmi, H.
PDB entry 2zrx: Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN and DMAPP.
Classification: ISOMERASE
Source organism: Sulfolobus shibatae
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-09-01
Authors: Unno, H., Yamashita, S., Ikeda, Y., Sekiguchi, S., Yoshida, N., Yoshimura, T., Kusunoki, M., Nakayama, T., Nishino, T., Hemmi, H.
PDB entry 2zry: Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN and IPP.
Classification: ISOMERASE
Source organism: Sulfolobus shibatae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2008-09-01
Authors: Unno, H., Yamashita, S., Ikeda, Y., Sekiguchi, S., Yoshida, N., Yoshimura, T., Kusunoki, M., Nakayama, T., Nishino, T., Hemmi, H.
PDB entry 2zrz: Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN and DMAPP
Classification: ISOMERASE
Source organism: Sulfolobus shibatae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-09-01
Authors: Unno, H., Yamashita, S., Ikeda, Y., Sekiguchi, S., Yoshida, N., Yoshimura, T., Kusunoki, M., Nakayama, T., Nishino, T., Hemmi, H.
PDB entry 2zs0: Structural Basis for the Heterotropic and Homotropic Interactions of Invertebrate Giant Hemoglobin
Classification: Oxygen Storage, Oxygen transport
Source organism: Oligobrachia mashikoi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-09-02
Authors: Numoto, N., Nakagawa, T., Kita, A., Sasayama, Y., Fukumori, Y., Miki, K.
PDB entry 2zs1: Structural Basis for the Heterotropic and Homotropic Interactions of Invertebrate Giant Hemoglobin
Classification: Oxygen Storage, Oxygen transport
Source organism: Oligobrachia mashikoi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-09-02
Authors: Numoto, N., Nakagawa, T., Kita, A., Sasayama, Y., Fukumori, Y., Miki, K.
PDB entry 2zs6: HA3 subcomponent of botulinum type C progenitor toxin
Classification: TOXIN
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-09-02
Authors: Nakamura, T., Tonozuka, T., Kotani, M., Oguma, K., Nishikawa, A.
PDB entry 2zs7: Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with citrate anion
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-09-03
Authors: Chetnani, B., Das, S., Kumar, P., Surolia, A., Vijayan, M.
PDB entry 2zs8: Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) co-crystallized with ADP
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-09-03
Authors: Chetnani, B., Das, S., Kumar, P., Surolia, A., Vijayan, M.
PDB entry 2zs9: Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP and Pantothenate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-09-04
Authors: Chetnani, B., Das, S., Kumar, P., Surolia, A., Vijayan, M.
PDB entry 2zsa: Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP and Phosphopantothenate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-09-04
Authors: Chetnani, B., Das, S., Kumar, P., Surolia, A., Vijayan, M.
PDB entry 2zsb: Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP, obtained through soaking of native enzyme crystals with the ligand
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2008-09-04
Authors: Chetnani, B., Das, S., Kumar, P., Surolia, A., Vijayan, M.
PDB entry 2zsc: Tamavidin2, Novel Avidin-like Biotin-Binding Proteins from an Edible Mushroom
Classification: Biotin Binding Protein
Source organism: Pleurotus cornucopiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-09-05
Authors: Kakuta, Y., Okino, N., Ito, M., Yamamoto, T., Takakura, Y.
PDB entry 2zsd: Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with Coenzyme A
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-09-05
Authors: Chetnani, B., Das, S., Kumar, P., Surolia, A., Vijayan, M.
PDB entry 2zse: Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with AMPPCP and Pantothenate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-09-05
Authors: Chetnani, B., Das, S., Kumar, P., Surolia, A., Vijayan, M.
PDB entry 2zsf: Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ATP and ADP
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-09-05
Authors: Chetnani, B., Das, S., Kumar, P., Surolia, A., Vijayan, M.
PDB entry 2zsg: Crystal structure of X-Pro aminopeptidase from Thermotoga maritima MSB8
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-09-10
Authors: Mizutani, H., Kunishima, N.
PDB entry 2zsh: Structural basis of gibberellin(GA3)-induced DELLA recognition by the gibberellin receptor
Classification: Hormone Receptor
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-10
Authors: Murase, K., Hirano, Y., Sun, T.P., Hakoshima, T.
PDB entry 2zsi: Structural basis of gibberellin(GA4)-induced DELLA recognition by the gibberellin receptor
Classification: Hormone Receptor
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-10
Authors: Murase, K., Hirano, Y., Sun, T.P., Hakoshima, T.
PDB entry 2zsj: Crystal structure of threonine synthase from Aquifex aeolicus VF5
Classification: LYASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-11
Authors: Mizutani, H., Kunishima, N.
PDB entry 2zsk: Crystal structure of PH1733, an aspartate racemase homologue, from Pyrococcus horikoshii OT3
Classification: UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-09-12
Authors: Kita, A., Tasaki, S., Yohda, M., Miki, K.
PDB entry 2zsl: Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix
Classification: ISOMERASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-09-17
Authors: Mizutani, H., Kunishima, N.
PDB entry 2zsm: Crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from Aeropyrum pernix, hexagonal form
Classification: ISOMERASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-17
Authors: Mizutani, H., Kunishima, N.
PDB entry 2zsn: Carbonmonoxy Sperm Whale Myoglobin at 100 K: Laser on [300 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-17
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zso: Carbonmonoxy Sperm Whale Myoglobin at 100 K: Laser on [450 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-17
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zsp: Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [300 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-17
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zsq: Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser on [150 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-17
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zsr: Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [450 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-17
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zss: Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser on [300 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-17
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zst: Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser on [450 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-17
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zsu: Crystal structure of spermidine synthase from Pyrococcus horikoshii OT3, P1 form
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-09-17
Authors: Mizutani, H., Kunishima, N.
PDB entry 2zsv: Crystal structure of H-2Kb in complex with JHMV epitope S598
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-18
Authors: Theodossis, A., Dunstone, M.A., Rossjohn, J.
PDB entry 2zsw: Crystal structure of H-2Kb in complex with the Q600Y variant of JHMV epitope S598
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-09-18
Authors: Theodossis, A., Dunstone, M.A., Rossjohn, J.
PDB entry 2zsx: Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser on [600 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-18
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zsy: Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser on [750 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-18
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zsz: Carbonmonoxy Sperm Whale Myoglobin at 100 K: Laser on [600 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-18
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zt0: Carbonmonoxy Sperm Whale Myoglobin at 100 K: Laser on [750 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-18
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zt1: Carbonmonoxy Sperm Whale Myoglobin at 100 K: Laser on [810 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-18
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zt2: Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [600 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-18
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zt3: Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [750 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-18
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zt4: Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [810 min]
Classification: OXYGEN TRANSPORT
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2008-09-18
Authors: Tomita, A., Sato, T., Ichiyanagi, K., Nozawa, S., Ichikawa, H., Chollet, M., Kawai, F., Park, S.-Y., Koshihara, S., Adachi, S.
PDB entry 2zt5: Crystal structure of human glycyl-trna synthetase (GLYRS) in complex with AP4A (cocrystallized with ATP)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-09-19
Authors: Guo, R.T., Yang, X.L., Schimmel, P.
PDB entry 2zt6: Crystal structure of human Glycyl-tRNA synthetase (GlyRS) in complex with AMPCPP
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2008-09-19
Authors: Guo, R.T., Yang, X.L., Schimmel, P.
PDB entry 2zt7: Crystal structure of human Glycyl-tRNA synthetase (GlyRS) in complex with Glycine and ATP
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-09-19
Authors: Guo, R.T., Yang, X.L., Schimmel, P.
PDB entry 2zt8: Crystal structure of human Glycyl-tRNA synthetase (GlyRS) in complex with Gly-AMP analog
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2008-09-19
Authors: Guo, R.T., Yang, X.L., Schimmel, P.
PDB entry 2zt9: Crystal Structure of the Cytochrome b6f Complex from Nostoc sp. PCC 7120
Classification: PHOTOSYNTHESIS
Source organism: Nostoc sp. PCC 7120
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-09-27
Authors: Craner, W.A., Baniulis, D., Yamashita, E.
PDB entry 2zta: X-RAY STRUCTURE OF THE GCN4 LEUCINE ZIPPER, A TWO-STRANDED, PARALLEL COILED COIL
Classification: LEUCINE ZIPPER
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1991-07-05
Authors: O'Shea, E.K., Klemm, J.D., Kim, P.S., Alber, T.
PDB entry 2ztb: Crystal structure of the parasporin-2 Bacillus thuringiensis toxin that recognizes cancer cells
Classification: TOXIN
Source organism: Bacillus thuringiensis serovar dakota
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2008-09-29
Authors: Akiba, T.
PDB entry 2ztc: MtRuvA Form II
Classification: DNA BINDING PROTEIN, RECOMBINATION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-10-01
Authors: Prabu, J.R., Thamotharan, S., Khanduja, J.S., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2ztd: MtRuvA Form III
Classification: DNA BINDING PROTEIN, RECOMBINATION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-10-01
Authors: Prabu, J.R., Thamotharan, S., Khanduja, J.S., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zte: MtRuvA Form IV
Classification: DNA BINDING PROTEIN, RECOMBINATION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-10-01
Authors: Prabu, J.R., Thamotharan, S., Khanduja, J.S., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2ztg: Crystal structure of Archaeoglobus fulgidus alanyl-tRNA synthetase lacking the C-terminal dimerization domain in complex with Ala-SA
Classification: LIGASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-10-01
Authors: Naganuma, M., Sekine, S., Fukunaga, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zth: Crystal structure of holo form of rat catechol-o-methyltransferase
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-10-01
Authors: Tsuji, E.
PDB entry 2zti: Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-10-06
Authors: Lokanath, N.K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2ztj: Crystal structure of homocitrate synthase from Thermus thermophilus complexed with alpha-ketoglutarate
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-10-06
Authors: Okada, T., Tomita, T., Kuzuyama, T., Nishiyama, M.
PDB entry 2ztk: Crystal structure of homocitrate synthase from Thermus thermophilus complexed with homocitrate
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2008-10-06
Authors: Okada, T., Tomita, T., Kuzuyama, T., Nishiyama, M.
PDB entry 2ztl: Closed conformation of D-3-hydroxybutyrate dehydrogenase complexed with NAD+ and L-3-hydroxybutyrate
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas fragi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-10-07
Authors: Nakashima, K., Nakajima, Y., Ito, K., Yoshimoto, T.
PDB entry 2ztm: T190S mutant of D-3-hydroxybutyrate dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas fragi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-10-07
Authors: Nakashima, K., Nakajima, Y., Ito, K., Yoshimoto, T.
PDB entry 2ztn: Hepatitis E virus ORF2 (Genotype 3)
Classification: VIRUS
Source organism: Hepatitis E virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.56 Å
Deposited: 2008-10-08
Authors: Yamashita, T., Unno, H., Mori, Y., Li, T.C., Takeda, N., Matsuura, Y.
PDB entry 2zts: Crystal structure of KaiC-like protein PH0186 from hyperthermophilic archaea Pyrococcus horikoshii OT3
Classification: ATP-binding protein
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2008-10-08
Authors: Ming, H., Miyazono, K., Tanokura, M.
PDB entry 2ztt: Crystal Structure of RNA polymerase PB1-PB2 subunits from Influenza A Virus
Classification: TRANSFERASE
Source organism: Influenza A virus (A/Puerto Rico/8/34(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-10-08
Authors: Sugiyama, K., Obayashi, E., Park, S.-Y.
PDB entry 2ztu: T190A mutant of D-3-hydroxybutyrate dehydrogenase complexed with NAD+
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas fragi
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-09
Authors: Nakashima, K., Nakajima, Y., Ito, K., Yoshimoto, T.
PDB entry 2ztv: The binary complex of D-3-hydroxybutyrate dehydrogenase with NAD+
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas fragi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-10-09
Authors: Nakashima, K., Nakajima, Y., Ito, K., Yoshimoto, T.
PDB entry 2ztw: Structure of 3-isopropylmalate dehydrogenase in complex with the inhibitor and NAD+
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2008-10-10
Authors: Nango, E., Kumasaka, T., Eguchi, T.
PDB entry 2ztx: Complex structure of CVB3 3C protease with EPDTC
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human coxsackievirus B3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2008-10-10
Authors: Lee, C.C., Wang, A.H.-J.
PDB entry 2zty: crystal structure of 3C protease from CVB3 in space group C2
Classification: HYDROLASE
Source organism: Human coxsackievirus B3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2008-10-10
Authors: Lee, C.C., Wang, A.H.-J.
PDB entry 2ztz: crystal structure of 3C protease from CVB3 in space group P21
Classification: HYDROLASE
Source organism: Human coxsackievirus B3
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-11
Authors: Lee, C.C., Wang, A.H.-J.
PDB entry 2zu0: Crystal structure of SufC-SufD complex involved in the iron-sulfur cluster biosynthesis
Classification: Biosynthetic Protein/Protein Binding
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-10-11
Authors: Wada, K.
PDB entry 2zu1: crystal structure of CVB3 3C protease mutant C147A
Classification: HYDROLASE
Source organism: Human coxsackievirus B3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2008-10-12
Authors: Lee, C.C., Tsui, Y.C., Wang, A.H.-J.
PDB entry 2zu2: complex structure of CoV 229E 3CL protease with EPDTC
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-10-12
Authors: Lee, C.C., Wang, A.H.-J.
PDB entry 2zu3: Complex structure of CVB3 3C protease with TG-0204998
Classification: hydrolase/hydrolase inhibitor
Source organism: Human coxsackievirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-10-12
Authors: Lee, C.C., Tsui, Y.C., Wang, A.H.-J.
PDB entry 2zu4: Complex structure of SARS-CoV 3CL protease with TG-0204998
Classification: hydrolase/hydrolase inhibitor
Source organism: SARS coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2008-10-12
Authors: Hsu, M.F., Lee, C.C., Wang, A.H.-J.
PDB entry 2zu5: complex structure of SARS-CoV 3CL protease with TG-0205486
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: SARS coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-10-12
Authors: Hsu, M.F., Lee, C.C., Wang, A.H.-J.
PDB entry 2zu6: crystal structure of the eIF4A-PDCD4 complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-10-13
Authors: Cho, Y., Chang, J.H., Sohn, S.Y.
PDB entry 2zu7: Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-10-14
Authors: Kawamura, T., Watanabe, N., Tanaka, I.
PDB entry 2zu8: Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-10-14
Authors: Kawamura, T., Watanabe, N., Tanaka, I.
PDB entry 2zu9: Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-14
Authors: Kawamura, T., Watanabe, N., Tanaka, I.
PDB entry 2zua: Crystal structure of nucleoside diphosphate kinase from Haloarcula quadrata
Classification: TRANSFERASE
Source organism: Haloarcula quadrata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2008-10-15
Authors: Ichimura, T., Yamamura, A., Ohtsuka, J., Miyazono, K., Okai, M., Nagata, K., Tanokura, M.
PDB entry 2zub: Left handed RadA
Classification: RECOMBINATION
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-10-15
Authors: Chang, Y.W., Ko, T.P., Wang, T.F., Wang, A.H.J.
PDB entry 2zuc: Crystal structure of left-handed RadA filament
Classification: RECOMBINATION
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-10-15
Authors: Chang, Y.W., Ko, T.P., Wang, T.F., Wang, A.H.J.
PDB entry 2zud: Crystal Structure of Left-handed RadA Filament
Classification: RECOMBINATION
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-10-16
Authors: Chang, Y.W., Ko, T.P., Wang, T.F., Wang, A.H.J.
PDB entry 2zue: Crystal structure of Pyrococcus horikoshii arginyl-tRNA synthetase complexed with tRNA(Arg) and an ATP analog (ANP)
Classification: Ligase/RNA
Source organism: Pyrococcus horikoshii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-16
Authors: Konno, M., Sumida, T., Uchikawa, E., Mori, Y., Yanagisawa, T., Sekine, S., Yokoyama, S.
PDB entry 2zuf: Crystal structure of Pyrococcus horikoshii arginyl-tRNA synthetase complexed with tRNA(Arg)
Classification: Ligase/RNA
Source organism: Pyrococcus horikoshii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-10-16
Authors: Konno, M., Sumida, T., Uchikawa, E., Mori, Y., Yanagisawa, T., Sekine, S., Yokoyama, S.
PDB entry 2zug: Crystal structure of WSSV ICP11
Classification: VIRAL PROTEIN
Source organism: Shrimp white spot syndrome virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2008-10-17
Authors: Wang, A.H.-J., Wang, H.-C., Ko, T.-P., Lo, C.-F.
PDB entry 2zuh: Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant (D297A)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-10-18
Authors: Sakurai, K., Harada, K., Shimada, H., Shimokata, K., Hayashi, T., Tsukihara, T.
PDB entry 2zui: Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant (D297N)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-10-18
Authors: Sakurai, K., Harada, K., Shimada, H., Shimokata, K., Hayashi, T., Tsukihara, T.
PDB entry 2zuj: Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant(D297L)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-10-18
Authors: Sakurai, K., Harada, K., Shimada, H., Shimokata, K., Hayashi, T., Tsukihara, T.
PDB entry 2zuk: The crystal structure of alpha-amino-epsilon-caprolactam racemase from Achromobacter obae complexed with epsilon caprolactam (different binding mode)
Classification: ISOMERASE
Source organism: Achromobacter obae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2008-10-18
Authors: Okazaki, S., Suzuki, A., Komeda, H., Asano, Y., Yamane, T.
PDB entry 2zul: Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533) in complex with cofactor S-adenosyl-L-Methionine
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-10-21
Authors: Wang, H., Kawazoe, M., Tatsuguchi, A., Naoe, C., Takemoto, C., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zum: Functional Analysis of Hyperthermophilic Endocellulase from the Archaeon Pyrococcus horikoshii
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-10-21
Authors: Kim, H.-W., Ishikawa, K.
PDB entry 2zun: Functional Analysis of Hyperthermophilic Endocellulase from the Archaeon Pyrococcus horikoshii
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-10-21
Authors: Kim, H.-W., Ishikawa, K.
PDB entry 2zup: Updated crystal structure of DsbB-DsbA complex from E. coli
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2008-10-28
Authors: Inaba, K., Suzuki, M., Murakami, S., Nakagawa, A.
PDB entry 2zuq: Crystal structure of DsbB-Fab complex
Classification: Oxidoreductase/IMMUNE SYSTEM
Source organism: Escherichia coli; mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-10-28
Authors: Inaba, K., Suzuki, M., Murakami, S.
PDB entry 2zur: Crystal Structure of Rh(nbd)/apo-Fr
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-10-28
Authors: Abe, S., Hirata, K., Ueno, T., Shimizu, N., Yamamoto, M., Takata, M., Watanabe, Y.
PDB entry 2zus: Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2008-10-28
Authors: Hidaka, M., Nishimoto, M., Kitaoka, M., Wakagi, T., Shoun, H., Fushinobu, S.
PDB entry 2zut: Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GalNAc
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-10-28
Authors: Hidaka, M., Nishimoto, M., Kitaoka, M., Wakagi, T., Shoun, H., Fushinobu, S.
PDB entry 2zuu: Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GlcNAc
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-10-28
Authors: Hidaka, M., Nishimoto, M., Kitaoka, M., Wakagi, T., Shoun, H., Fushinobu, S.
PDB entry 2zuv: Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GlcNAc, Ethylene glycol, and nitrate
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-10-28
Authors: Hidaka, M., Nishimoto, M., Kitaoka, M., Wakagi, T., Shoun, H., Fushinobu, S.
PDB entry 2zuw: Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GlcNAc and sulfate
Classification: TRANSFERASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2008-10-28
Authors: Hidaka, M., Nishimoto, M., Kitaoka, M., Wakagi, T., Shoun, H., Fushinobu, S.
PDB entry 2zux: Crystal structure of rhamnogalacturonan lyase YesW complexed with rhamnose
Classification: LYASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2008-10-28
Authors: Ochiai, A., Itoh, T., Mikami, B., Hashimoto, W., Murata, K.
PDB entry 2zuy: Crystal structure of exotype rhamnogalacturonan lyase YesX
Classification: LYASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-10-28
Authors: Ochiai, A., Itoh, T., Mikami, B., Hashimoto, W., Murata, K.
PDB entry 2zv2: Crystal structure of human calcium/calmodulin-dependent protein kinase kinase 2, beta, CaMKK2 kinase domain in complex with STO-609
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-10-31
Authors: Yoshikawa, S., Kukimoto-niino, M., Shirouzu, M., Suzuki, A., Lee, S., Minokoshi, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zv3: Crystal structure of project MJ0051 from Methanocaldococcus jannaschii DSM 2661
Classification: HYDROLASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-10-31
Authors: Shimizu, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zv6: Crystal structure of human squamous cell carcinoma antigen 1
Classification: HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-11-01
Authors: Zheng, B., Matoba, Y., Katagiri, C., Hibino, T., Sugiyama, M.
PDB entry 2zv7: Lyn Tyrosine Kinase Domain, apo form
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-11-04
Authors: Williams, N.K., Rossjohn, J.
PDB entry 2zv8: Lyn Tyrosine Kinase Domain-AMP-PNP complex
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-11-04
Authors: Williams, N.K., Rossjohn, J.
PDB entry 2zv9: Lyn Tyrosine Kinase Domain-PP2 complex
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2008-11-04
Authors: Williams, N.K., Rossjohn, J.
PDB entry 2zva: Lyn Tyrosine Kinase Domain-Dasatinib complex
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-11-04
Authors: Williams, N.K., Rossjohn, J.
PDB entry 2zvb: Crystal structure of TT0207 from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-11-04
Authors: Shimizu, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zvc: Form 2 structure (C2221) of TT0207 from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-11-04
Authors: Shimizu, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zvd: Crystal structure of Pseudomonas sp. MIS38 lipase in an open conformation
Classification: HYDROLASE
Source organism: Pseudomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-11-05
Authors: Angkawidjaja, C., Matsumura, H., Koga, Y., Takano, K., Kanaya, S.
PDB entry 2zvf: Crystal structure of Archaeoglobus fulgidus alanyl-tRNA synthetase C-terminal dimerization domain
Classification: LIGASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-11-06
Authors: Naganuma, M., Sekine, S., Fukunaga, R., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zvi: Crystal structure of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis
Classification: ISOMERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-11-07
Authors: Tamura, H., Yadani, T., Kai, Y., Inoue, T., Matsumura, H.
PDB entry 2zvj: Crystal structures of rat Catechol-O-Methyltransferase complexed with coumarine-based inhibitor
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-11-07
Authors: Tsuji, E.
PDB entry 2zvk: Crystal structure of PCNA in complex with DNA polymerase eta fragment
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-11-11
Authors: Hishiki, A., Hashimoto, H., Hanafusa, T., Kamei, K., Ohashi, E., Shimizu, T., Ohmori, H., Sato, M.
PDB entry 2zvl: Crystal structure of PCNA in complex with DNA polymerase kappa fragment
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-11-11
Authors: Hishiki, A., Hashimoto, H., Hanafusa, T., Kamei, K., Ohashi, E., Shimizu, T., Ohmori, H., Sato, M.
PDB entry 2zvm: Crystal structure of PCNA in complex with DNA polymerase iota fragment
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-11-11
Authors: Hishiki, A., Hashimoto, H., Hanafusa, T., Kamei, K., Ohashi, E., Shimizu, T., Ohmori, H., Sato, M.
PDB entry 2zvn: NEMO CoZi domain incomplex with diubiquitin in P212121 space group
Classification: SIGNALING PROTEIN/Transcription
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-11-12
Authors: Rahighi, S., Ikeda, F., Kawasaki, M., Akutsu, M., Suzuki, N., Kato, R., Kensche, T., Uejima, T., Bloor, S., Komander, D., Randow, F., Wakatsuki, S., Dikic, I.
PDB entry 2zvo: NEMO CoZi domain in complex with diubiquitin in C2 space group
Classification: Transcription/SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-11-12
Authors: Rahighi, S., Ikeda, F., Kawasaki, M., Akutsu, M., Suzuki, N., Kato, R., Kensche, T., Uejima, T., Bloor, S., Komander, D., Randow, F., Wakatsuki, S., Dikic, I.
PDB entry 2zvp: Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and p-nitrophenol
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-11-14
Authors: Teramoto, T., Sakakibara, Y., Liu, M.-C., Suiko, M., Kimura, M., Kakuta, Y.
PDB entry 2zvq: Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and alpha-naphthol
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-11-14
Authors: Teramoto, T., Sakakibara, Y., Liu, M.-C., Suiko, M., Kimura, M., Kakuta, Y.
PDB entry 2zvr: Crystal structure of a D-tagatose 3-epimerase-related protein from Thermotoga maritima
Classification: ISOMERASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-11-14
Authors: Sakuraba, H., Ohshima, T.
PDB entry 2zvs: Crystal structure of the 2[4FE-4S] ferredoxin from escherichia coli
Classification: ELECTRON TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-11-18
Authors: Giastas, P., Mavridis, M.I.
PDB entry 2zvt: Cys285Ser mutant PPARgamma ligand-binding domain complexed with 15-deoxy-delta12,14-prostaglandin J2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-11-19
Authors: Waku, T., Oyama, T., Shiraki, T., Morikawa, K.
PDB entry 2zvu: Crystal structure of rat heme oxygenase-1 in complex with ferrous verdoheme
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-11-21
Authors: Sato, H., Sugishima, M., Fukuyama, K., Noguchi, M.
PDB entry 2zvv: Crystal structure of Proliferating cellular nuclear antigen 1 and Short peptide from human P21
Classification: DNA BINDING PROTEIN
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-11-21
Authors: Strzalka, W., Oyama, T., Tori, K., Morikawa, K.
PDB entry 2zvw: Crystal structure of Proliferating cell nuclear antigen 2 and Short peptide from human P21
Classification: DNA BINDING PROTEIN
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-11-21
Authors: Strzalka, W., Oyama, T., Tori, K., Morikawa, K.
PDB entry 2zvx: Structure of a BPTI-[5,55] variant containing Gly/Val at the 14/38th positions
Classification: HYDROLASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2008-11-24
Authors: Islam, M.M., Sohya, S., Noguchi, K., Yohda, M., Kuroda, Y.
PDB entry 2zvy: Structure of the periplasmic domain of MotB from Salmonella (crystal form II)
Classification: MEMBRANE PROTEIN
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-11-26
Authors: Kojima, S., Homma, M., Namba, K., Imada, K.
PDB entry 2zvz: Structure of the periplasmic domain of MotB from Salmonella (crystal form III)
Classification: MEMBRANE PROTEIN
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-11-26
Authors: Imada, K., Kojima, S., Namba, K., Homma, S.
PDB entry 2zw0: Crystal structure of a Streptococcal protein G B1 mutant
Classification: IMMUNE SYSTEM
Source organism: Finegoldia magna
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-11-26
Authors: Watanabe, H., Matsumaru, H., Odahara, T., Suto, K., Honda, S.
PDB entry 2zw1: Crystal structure of a Streptococcal protein G B1 mutant
Classification: IMMUNE SYSTEM
Source organism: Finegoldia magna
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-11-26
Authors: Watanabe, H., Matsumaru, H., Odahara, T., Suto, K., Honda, S.
PDB entry 2zw2: Crystal Structure of Formylglycinamide Ribonucleotide Amidotransferase III from SULFOLOBUS TOKODAII (STPURS)
Classification: LIGASE
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-11-27
Authors: Suzuki, S., Tamura, S., Okada, K., Baba, S., Kumasaka, T., Nakagawa, N., Masui, R., Kuramitsu, S., Sampei, G., Kawai, G.
PDB entry 2zw3: Structure of the connexin-26 gap junction channel at 3.5 angstrom resolution
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2008-12-01
Authors: Maeda, S., Nakagawa, S., Suga, M., Yamashita, E., Oshima, A., Fujiyoshi, Y., Tsukihara, T.