LiteFold/PDB huggingface dataset:
PDB entry 8e20: Cryo-EM structure of the full-length human NF1 dimer
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-08-12
Authors: Darling, J.E., Merk, A., Grisshammer, R., Ognjenovic, J.
PDB entry 8e21: The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ001023034
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Luxembourg/43/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2022-08-12
Authors: Cuypers, M.G., Slavish, J.P., Rankovic, Z., White, S.W.
PDB entry 8e22: VPS37A_21-148
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-08-12
Authors: Tian, F., Ye, Y.S.
PDB entry 8e23: Human DNA polymerase theta in complex with allosteric inhibitor
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2022-08-13
Authors: Mader, P., Pau, V.P.T., Sicheri, F.
PDB entry 8e24: Human DNA polymerase theta in complex with allosteric inhibitor
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2022-08-13
Authors: Mader, P., Pau, V.P.T., Sicheri, F.
PDB entry 8e25: Crystal Structure of SARS-CoV-2 Main Protease M49I mutant in complex with Nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.868 Å
Deposited: 2022-08-14
Authors: Noske, G.D., Godoy, A.S., Oliva, G.
PDB entry 8e26: Crystal Structure of SARS-CoV-2 Main Protease N142S mutant in complex with Nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.845 Å
Deposited: 2022-08-14
Authors: Noske, G.D., Godoy, A.S., Oliva, G.
PDB entry 8e27: RNA-free Human Dis3L2
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-08-14
Authors: Meze, K., Thomas, D.R., Joshua-Tor, L.
PDB entry 8e28: Human Dis3L2 in complex with hairpin A-GCU14
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-14
Authors: Meze, K., Thomas, D.R., Joshua-Tor, L.
PDB entry 8e29: Human Dis3L2 in complex with hairpin C-U12
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-14
Authors: Meze, K., Thomas, D.R., Joshua-Tor, L.
PDB entry 8e2a: Human Dis3L2 in complex with hairpin D-U7
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-08-14
Authors: Meze, K., Thomas, D.R., Joshua-Tor, L.
PDB entry 8e2b: N-terminal domain of S. aureus GpsB
Classification: PEPTIDE BINDING PROTEIN
Source organism: Staphylococcus aureus subsp. aureus COL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-08-14
Authors: Sacco, M., Chen, Y.
PDB entry 8e2c: N-terminal domain of S. aureus GpsB in complex with PBP4 fragment
Classification: PEPTIDE BINDING PROTEIN
Source organism: Staphylococcus aureus subsp. aureus COL
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-08-14
Authors: Sacco, M., Chen, Y.
PDB entry 8e2d: Cryo-EM structure of BIRC6 (consensus)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.07 Å
Deposited: 2022-08-15
Authors: Hunkeler, M., Fischer, E.S.
PDB entry 8e2e: Cryo-EM structure of helical arch of BIRC6 (from local refinement 1)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.98 Å
Deposited: 2022-08-15
Authors: Hunkeler, M., Fischer, E.S.
PDB entry 8e2f: Cryo-EM structure of N-terminal arm of BIRC6 (from local refinement 2)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2022-08-15
Authors: Hunkeler, M., Fischer, E.S.
PDB entry 8e2g: Cryo-EM structure of N-terminal arm (aa68-966) of BIRC6 (from local refinement 3)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2022-08-15
Authors: Hunkeler, M., Fischer, E.S.
PDB entry 8e2h: Cryo-EM structure of C-terminal arm of BIRC6 (from local refinement 4)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-08-15
Authors: Hunkeler, M., Fischer, E.S.
PDB entry 8e2i: Cryo-EM structure of BIRC6/Smac
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2022-08-15
Authors: Hunkeler, M., Fischer, E.S.
PDB entry 8e2j: Cryo-EM structure of BIRC6/Smac (from local refinement 1)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2022-08-15
Authors: Hunkeler, M., Fischer, E.S.
PDB entry 8e2k: Cryo-EM structure of BIRC6/HtrA2-S306A
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2022-08-15
Authors: Hunkeler, M., Fischer, E.S.
PDB entry 8e2l: Structure of Lates calcarifer Twinkle helicase with ATP and DNA
Classification: REPLICATION/DNA
Source organism: Lates calcarifer; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2022-08-15
Authors: Gao, Y., Li, Z.
PDB entry 8e2m: Bruton's tyrosine kinase (BTK) with compound 13
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.904 Å
Deposited: 2022-08-15
Authors: Alexander, R., Milligan, C.M.
PDB entry 8e2n: Crystal Structure of Nanobody VHH113 Specific for PA14 Cif
Classification: IMMUNE SYSTEM
Source organism: Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-08-15
Authors: Simard, A.R., Madden, D.R.
PDB entry 8e2o: Leveraging the Structure of DNAJA1 to Discover Novel Pancreatic Cancer Therapies
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-08-15
Authors: Roth, H.E., Powers, R.
PDB entry 8e2p: Crystal structure of TadA*8.20 in a complex with ssDNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2022-08-15
Authors: Feliciano, P.R., Lee, S.J., Ciaramella, G.
PDB entry 8e2q: Crystal structure of TadAC-1.17 in a complex with ssDNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2022-08-15
Authors: Feliciano, P.R., Lee, S.J., Ciaramella, G.
PDB entry 8e2r: Crystal structure of TadAC-1.14
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-08-15
Authors: Feliciano, P.R., Lee, S.J., Ciaramella, G.
PDB entry 8e2s: Crystal structure of TadAC-1.19
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2022-08-15
Authors: Feliciano, P.R., Lee, S.J., Ciaramella, G.
PDB entry 8e2u: HMPV F monomer bound to RSV-199 Fab
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens; Human metapneumovirus A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2022-08-16
Authors: Wen, X., Jardetzky, T.S.
PDB entry 8e2w: Structure of CRISPR-Associated DinG
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2022-08-16
Authors: Domgaard, H., Jackson, R.N.
PDB entry 8e2x: Purification of Enterovirus A71, strain 4643, WT capsid
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-08-16
Authors: Catching, A., Capponi, S., Andino, R.
PDB entry 8e2y: Purification of Enterovirus A71, strain 4643, WT capsid
Classification: VIRUS
Source organism: Enterovirus A71
Experimental method: ELECTRON MICROSCOPY
Resolution: 8 Å
Deposited: 2022-08-16
Authors: Catching, A., Capponi, S., Andino, R.
PDB entry 8e2z: Structures of HLA-B8E76C loaded with long peptides reveal novel features at the N-terminus of the groove
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2022-08-16
Authors: Li, L., Bouvier, M.
PDB entry 8e30: E. coli 50S ribosome bound to compound streptogramin A analog 3142
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.91 Å
Deposited: 2022-08-16
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e31: Purification of Enterovirus A71, strain 4643, WT capsid
Classification: VIRUS
Source organism: Enterovirus A71
Experimental method: ELECTRON MICROSCOPY
Resolution: 14 Å
Deposited: 2022-08-16
Authors: Catching, A., Capponi, S., Andino, R.
PDB entry 8e32: E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2022-08-16
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e33: E. coli 50S ribosome bound to compound streptogramin analog SAB001
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.23 Å
Deposited: 2022-08-16
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e34: CryoEM structures of bAE1 captured in multiple states
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2022-08-16
Authors: Zhekova, H.R., Wang, W.G., Jiang, J.S., Tsirulnikov, K., Muhammad-Khan, G.H., Azimov, R., Abuladze, N., Kao, L., Newman, D., Noskov, S.Y., Tieleman, P., Zhou, Z.H., Pushkin, A., Kurtz, I.
PDB entry 8e35: E. coli 50S ribosome bound to compound SAB002
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.27 Å
Deposited: 2022-08-16
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e36: E. coli 50S ribosome bound to compound streptogramin A analog 3146
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.38 Å
Deposited: 2022-08-16
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e37: Structure of Campylobacter concisus wild-type SeMet PglC
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter concisus 13826
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2022-08-16
Authors: Vuksanovic, N., Ray, L.C., Imperiali, B., Allen, K.N.
PDB entry 8e38: Purification of Enterovirus A71, strain 4643, WT capsid
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-08-16
Authors: Catching, A., Capponi, S., Andino, R.
PDB entry 8e39: Purification of Enterovirus A71, strain 4643, WT capsid
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-16
Authors: Catching, A., Capponi, S., Andino, R.
PDB entry 8e3a: Purification of Enterovirus A71, strain 4643, WT capsid
Classification: VIRUS
Source organism: Human enterovirus 71
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.4 Å
Deposited: 2022-08-16
Authors: Catching, A., Capponi, S., Andino, R.
PDB entry 8e3b: Purification of Enterovirus A71, strain 4643, WT capsid
Classification: VIRUS
Source organism: Enterovirus A71
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.9 Å
Deposited: 2022-08-16
Authors: Catching, A., Capponi, S., Andino, R.
PDB entry 8e3c: Purification of Enterovirus A71, strain 4643, WT capsid
Classification: VIRUS
Source organism: Enterovirus A71
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.1 Å
Deposited: 2022-08-16
Authors: Catching, A., Capponi, S., Andino, R.
PDB entry 8e3d: ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing CAST sequence (#11)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2022-08-17
Authors: Horton, J.R., Ren, R., Cheng, X.
PDB entry 8e3e: ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing CAST sequence (#10)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2022-08-17
Authors: Horton, J.R., Ren, R., Cheng, X.
PDB entry 8e3f: Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Classification: TRANSCRIPTION, TRANSFERASE/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2022-08-17
Authors: Molodtsov, V., Wang, C.
PDB entry 8e3g: BMP2/GDF5 heterodimer
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-08-17
Authors: Gipson, G.R., Nolan, K.T., Thompson, T.B.
PDB entry 8e3h: Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Classification: TRANSCRIPTION/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2022-08-17
Authors: Molodtsov, V., Wang, C.
PDB entry 8e3i: CRYO-EM STRUCTURE OF the human MPSF IN COMPLEX WITH THE AUUAAA poly(A) signal
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2022-08-17
Authors: Gutierrez, P.A., Wei, J., Sun, Y., Tong, L.
PDB entry 8e3j: Co-crystal structure of Chaetomium glucosidase with compound 4
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2022-08-17
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8e3k: Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2022-08-17
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 8e3l: E. coli 50S ribosome bound to D-linker solithromycin conjugate
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e3m: E. coli 50S ribosome bound to L-linker solithromycin conjugate
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.25 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e3n: Crystal structure of pregnane X receptor ligand binding domain complexed with rifamycin S
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-08-17
Authors: Huber, A.D., Poudel, S., Seetharaman, J., Miller, D.J., Lin, W., Chen, T.
PDB entry 8e3o: E. coli 50S ribosome bound to solithromycin and VM1
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.99 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e3p: Co-crystal structure of Chaetomium glucosidase with compound 5
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-08-17
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8e3q: CRYO-EM STRUCTURE OF the human MPSF
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2022-08-17
Authors: Gutierrez, P.A., Wei, J., Sun, Y., Tong, L.
PDB entry 8e3r: Human PU.1 ETS-Domain (165-270) Bound to d(AATAAAAGGAAGTGGG)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-08-17
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 8e3s: CryoEM structure of yeast Arginyltransferase 1 (ATE1)
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-17
Authors: Huang, W., Zhang, Y., Taylor, D.J.
PDB entry 8e3t: Gallium-reconstituted nitrogenase MoFeP mutant S188A from Azotobacter vinelandii after IDS oxidation
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii DJ
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-08-17
Authors: Rutledge, H.L., Tezcan, F.A.
PDB entry 8e3u: Nickel-reconstituted nitrogenase MoFeP mutant S188A from Azotobacter vinelandii after IDS oxidation
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii DJ
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2022-08-17
Authors: Rutledge, H.L., Tezcan, F.A.
PDB entry 8e3v: Cobalt-reconstituted nitrogenase MoFeP mutant S188A from Azotobacter vinelandii after IDS oxidation
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii DJ
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-08-17
Authors: Rutledge, H.L., Tezcan, F.A.
PDB entry 8e3w: BRD4-D1 in complex with BET inhibitor
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2022-08-17
Authors: Gorman, M.A., Fitzgerald, C.G.D., White, J.M., Parker, M.W.
PDB entry 8e3x: Cryo-EM structure of the PAC1R-PACAP27-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-08-17
Authors: Piper, S.J., Danev, R., Sexton, P., Wootten, D.
PDB entry 8e3y: Cryo-EM structure of the VPAC1R-PACAP27-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-08-17
Authors: Piper, S.J., Danev, R., Sexton, P., Wootten, D.
PDB entry 8e3z: Cryo-EM structure of the VPAC1R-VIP-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-08-17
Authors: Piper, S.J., Danev, R., Sexton, P., Wootten, D.
PDB entry 8e40: Full-length APOBEC3G in complex with HIV-1 Vif, CBF-beta, and fork RNA
Classification: VIRAL PROTEIN/RNA
Source organism: Escherichia coli; Homo sapiens; Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2022-08-17
Authors: Ito, F., Alvarez-Cabrera, A.L., Liu, S., Yang, H., Shiriaeva, A., Zhou, Z.H., Chen, X.S.
PDB entry 8e41: E. coli 50S ribosome bound to tiamulin and VS1
Classification: RIBOSOME
Source organism: Escherichia coli; Streptomyces virginiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.13 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e42: E. coli 50S ribosome bound to tiamulin and azithromycin
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e43: E. coli 50S ribosome bound to compound streptogramin A analog 3336
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.09 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Seiple, I.B., Fraser, J.S.
PDB entry 8e44: E. coli 50S ribosome bound to antibiotic analog SLC09
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e45: E. coli 50S ribosome bound to antibiotic analog SLC17
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e46: E. coli 50S ribosome bound to antibiotic analog SLC21
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e47: E. coli 50S ribosome bound to antibiotic analog SLC26
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e48: E. coli 50S ribosome bound to antibiotic analog SLC30
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.27 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e49: E. coli 50S ribosome bound to antibiotic analog SLC31
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.05 Å
Deposited: 2022-08-17
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 8e4a: Pseudomonas LpxC in complex with LPC-233
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.034 Å
Deposited: 2022-08-17
Authors: Najeeb, J., Zhou, P.
PDB entry 8e4c: IgM BCR fab truncated form
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-08-18
Authors: Dong, Y., Pi, X., Wu, H., Reth, M.
PDB entry 8e4d: [U:Ag+:U] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.19 Å
Deposited: 2022-08-18
Authors: Vecchioni, S., Lu, B., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 8e4e: [T:Ag+:T] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.19 Å
Deposited: 2022-08-18
Authors: Vecchioni, S., Lu, B., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 8e4f: Crystal structure of dihydrofolate reductase (DHFR) from the filarial nematode W. bancrofti in complex with NADPH and folate
Classification: OXIDOREDUCTASE
Source organism: Wuchereria bancrofti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2022-08-18
Authors: Lange, K., Frey, K.M., Goodey, N.M.
PDB entry 8e4g: Remodeling of the bacteriophage T7 during initial infection
Classification: VIRUS
Source organism: Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-08-18
Authors: Wang, C., Liu, J., Molineux, I.J.
PDB entry 8e4h: Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGAGGAAGTGGG)
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2022-08-18
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 8e4i: Co-crystal structure of Chaetomium glucosidase with compound 6
Classification: HYDROLASE/INHIBITOR
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-08-18
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8e4j: Room-temperature X-ray structure of SARS-CoV-2 main protease H41A miniprecursor mutant
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-08-18
Authors: Coates, L., Kneller, D.W., Kovalevsky, A.
PDB entry 8e4k: Co-crystal structure of Chaetomium glucosidase with compound 7
Classification: HYDROLASE/INHIBITOR
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-08-18
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8e4l: The open state mouse TRPM8 structure in complex with the cooling agonist C3, AITC, and PI(4,5)P2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2022-08-18
Authors: Yin, Y., Zhang, F., Feng, S., Butay, K.J., Borgnia, M.J., Im, W., Lee, S.-Y.
PDB entry 8e4m: The intermediate C2-state mouse TRPM8 structure in complex with the cooling agonist C3 and PI(4,5)P2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2022-08-18
Authors: Yin, Y., Zhang, F., Feng, S., Butay, K.J., Borgnia, M.J., Im, W., Lee, S.-Y.
PDB entry 8e4n: The closed C1-state mouse TRPM8 structure in complex with PI(4,5)P2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2022-08-18
Authors: Yin, Y., Zhang, F., Feng, S., Butay, K.J., Borgnia, M.J., Im, W., Lee, S.-Y.
PDB entry 8e4o: The closed C1-state mouse TRPM8 structure in complex with putative PI(4,5)P2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2022-08-18
Authors: Yin, Y., Zhang, F., Feng, S., Butay, K.J., Borgnia, M.J., Im, W., Lee, S.-Y.
PDB entry 8e4p: Mouse TRPM8 structure determined in the ligand- and PI(4,5)P2-free condition, Class I , C0 state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2022-08-18
Authors: Yin, Y., Zhang, F., Feng, S., Butay, K.J., Borgnia, M.J., Im, W., Lee, S.-Y.
PDB entry 8e4q: The closed C0-state flycatcher TRPM8 structure in complex with PI(4,5)P2
Classification: MEMBRANE PROTEIN
Source organism: Ficedula albicollis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2022-08-18
Authors: Yin, Y., Zhang, F., Feng, S., Butay, K.J., Borgnia, M.J., Im, W., Lee, S.-Y.
PDB entry 8e4r: Room-temperature X-ray structure of SARS-CoV-2 main protease H41A miniprecursor mutant in complex with GC373
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-08-18
Authors: Coates, L., Kneller, D.W., Kovalevsky, A.
PDB entry 8e4s: The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ001023034
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Luxembourg/43/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-08-18
Authors: Cuypers, M.G., Slavish, J.P., Rankovic, Z., White, S.W.
PDB entry 8e4t: Crystal structure of the kinase domain of RTKC8 from the choanoflagellate Monosiga brevicollis
Classification: TRANSFERASE
Source organism: Monosiga brevicollis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-08-18
Authors: Bajaj, T., Gee, C.L., Kuriyan, J.
PDB entry 8e4v: Solution structure of the WH domain of MORF
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-08-19
Authors: Zhang, Y., Kutateladze, T.G.
PDB entry 8e4w: Crystal Structure of SARS CoV-2 Mpro mutant N142P with Pfizer Intravenous Inhibitor PF-00835231
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-08-19
Authors: Shaqra, A.M., Schiffer, C.A.
PDB entry 8e4x: Human Adenosine Deaminase Acting on dsRNA (ADAR2-R2D) bound to dsRNA containing a G:3-deaza dA pair adjacent to the target site
Classification: RNA binding protein/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-08-19
Authors: Fisher, A.J., Mendoza, H.G.
PDB entry 8e4y: Cryo-EM structure of human glycerol-3-phosphate acyltransferase 1 (GPAT1) in complex with 2-oxohexadecyl-CoA
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-08-19
Authors: Johnson, Z.L., Wasilko, D.J., Ammirati, M., Chang, J.S., Han, S., Wu, H.
PDB entry 8e4z: Co-crystal structure of Chaetomium glucosidase with compound 8
Classification: HYDROLASE/INHIBITOR
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2022-08-19
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8e50: Cryo-EM structure of human glycerol-3-phosphate acyltransferase 1 (GPAT1) in complex with CoA and palmitoyl-LPA
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2022-08-19
Authors: Wasilko, D.J., Johnson, Z.L., Ammirati, M., Chang, J.S., Han, S., Wu, H.
PDB entry 8e51: Crystal Structure of Iridescent Shark Catfish Cadherin-23 EC1-2 and Protocadherin-15 EC1-2
Classification: CELL ADHESION
Source organism: Pangasianodon hypophthalmus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.594 Å
Deposited: 2022-08-19
Authors: Scheib, E., Nisler, C.R., Sotomayor, M.
PDB entry 8e52: MicroED structure of proteinase K recorded on K2
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.8 Å
Deposited: 2022-08-19
Authors: Clabbers, M.T.B., Martynowycz, M.W., Hattne, J., Nannenga, B.L., Gonen, T.
PDB entry 8e53: MicroED structure of proteinase K recorded on K3
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.7 Å
Deposited: 2022-08-19
Authors: Clabbers, M.T.B., Martynowycz, M.W., Hattne, J., Nannenga, B.L., Gonen, T.
PDB entry 8e54: MicroED structure of triclinic lysozyme recorded on K3
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.2 Å
Deposited: 2022-08-19
Authors: Clabbers, M.T.B., Martynowycz, M.W., Hattne, J., Nannenga, B.L., Gonen, T.
PDB entry 8e55: Design of Diverse Asymmetric Pockets in de novo Homo-oligomeric Proteins
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2022-08-19
Authors: Gerben, S., Borst, A.J., Baker, D.
PDB entry 8e56: Rabbit L-type voltage-gated calcium channel Cav1.1 in the presence of Amiodarone at 2.8 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-08-20
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8e57: Rabbit L-type voltage-gated calcium channel Cav1.1 in the presence of Amiodarone and 100 microM MNI-1 at 2.8 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-08-20
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8e58: Rabbit L-type voltage-gated calcium channel Cav1.1 in the presence of Amiodarone and 1 mM MNI-1 at 3.0 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-08-20
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8e59: Human L-type voltage-gated calcium channel Cav1.3 in the presence of Amiodarone at 3.1 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-20
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8e5a: Human L-type voltage-gated calcium channel Cav1.3 treated with 1.4 mM Sofosbuvir at 3.3 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-08-20
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8e5b: Human L-type voltage-gated calcium channel Cav1.3 in the presence of Amiodarone and Sofosbuvir at 3.3 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-08-20
Authors: Gao, S., Yao, X., Yan, N.
PDB entry 8e5c: Crystal Structure of SARS CoV-2 Mpro mutant L50F with Nirmatrelvir captured in two conformational states
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-08-20
Authors: Shaqra, A.M., Schiffer, C.A.
PDB entry 8e5d: Crystal structure of double-stranded DNA deaminase toxin DddA in complex with DNA with the target cytosine parked in the major groove
Classification: TOXIN/DNA
Source organism: Burkholderia cenocepacia; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2022-08-21
Authors: Yin, L., Shi, K., Aihara, H.
PDB entry 8e5e: Crystal structure of double-stranded DNA deaminase toxin DddA in complex with DNA with the target cytosine flipped into the active site
Classification: TOXIN/DNA
Source organism: Burkholderia cenocepacia; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2022-08-21
Authors: Yin, L., Shi, K., Aihara, H.
PDB entry 8e5f: Cryo-EM of P. calidifontis cytochrome filament
Classification: ELECTRON TRANSPORT
Source organism: Pyrobaculum calidifontis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-08-22
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 8e5g: Cryo-EM of A. veneficus cytochrome filament
Classification: ELECTRON TRANSPORT
Source organism: Archaeoglobus veneficus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-08-22
Authors: Wang, F., Baquero, D.P., Krupovic, M., Egelman, E.H.
PDB entry 8e5h: Old Yellow Enzyme 5 (PcOYE5) from Pseudomonas chloritidismutans
Classification: OXIDOREDUCTASE
Source organism: Stutzerimonas chloritidismutans AW-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2022-08-22
Authors: Frkic, R.L., Jackson, C.J.
PDB entry 8e5i: Old Yellow Enzyme 1 (NpOYE1) from Neptuniibacter sp.
Classification: OXIDOREDUCTASE
Source organism: Neptuniibacter sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-08-22
Authors: Frkic, R.L., Jackson, C.J.
PDB entry 8e5j: The crystal structure of 4-n-butylbenzoic acid bound CYP199A4
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-08-22
Authors: Doherty, D.Z., Bell, S.G., Bruning, J.B.
PDB entry 8e5k: Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Classification: TRANSCRIPTION, TRANSFERASE/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-08-22
Authors: Molodtsov, V., Wang, C.
PDB entry 8e5l: Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Classification: TRANSCRIPTION/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-08-22
Authors: Molodtsov, V., Wang, C.
PDB entry 8e5m: Structure of ARG1 complex with pyrrolidine-based non-boronic acid inhibitor 6
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2022-08-22
Authors: Palte, R.L., Gathiaka, S.
PDB entry 8e5n: Structure of ARG1 complex with pyrrolidine-based non-boronic acid inhibitor 10
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.538 Å
Deposited: 2022-08-22
Authors: Palte, R.L., Gathiaka, S.
PDB entry 8e5o: Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Classification: TRANSCRIPTION, TRANSFERASE/DNA/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-08-22
Authors: Molodtsov, V., Wang, C.
PDB entry 8e5p: Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Classification: TRANSCRIPTION/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-08-22
Authors: Molodtsov, V., Wang, C.
PDB entry 8e5q: Schistosoma mansoni (Blood Fluke) Sulfotransferase/CIDD-0150303 Complex
Classification: TRANSFERASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2022-08-22
Authors: Taylor, A.B., Alwan, S.N.
PDB entry 8e5r: Schistosoma mansoni (Blood Fluke) Sulfotransferase/CIDD-0150610 Complex
Classification: TRANSFERASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-08-22
Authors: Taylor, A.B., Alwan, S.N.
PDB entry 8e5s: X-ray structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter WT in an occluded state
Classification: METAL TRANSPORT
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-08-22
Authors: Ray, S., Gaudet, R.
PDB entry 8e5t: Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae BY4741
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-08-22
Authors: Sanghai, Z.A., Piwowarczyk, R., Vanden Broeck, A., Klinge, S.
PDB entry 8e5u: Co-crystal structure of Chaetomium glucosidase with compound 9
Classification: HYDROLASE/INHIBITOR
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2022-08-22
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8e5v: X-ray structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter WTsoak in an occluded state
Classification: METAL TRANSPORT
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2022-08-22
Authors: Ray, S., Gaudet, R.
PDB entry 8e5w: Crystal structure of dehydroalanine Hip1
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-08-22
Authors: Goldfarb, N.E., Brooks, C.L., Ostrov, D.A.
PDB entry 8e5x: Crystal structure of SARS-CoV-2 3CL protease in complex with a dimethyl sulfinyl benzene inhibitor
Classification: HYDROLASE, Viral protein/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-08-22
Authors: Lovell, S., Machen, A.J., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 8e5y: Human PU.1 ETS-Domain Bound to d(AATAAGCGGAAGTGGG) Acetate Free at pH 5.4
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2022-08-22
Authors: Terrell, J.R., Poon, G.M.K.
PDB entry 8e5z: Crystal structure of SARS-CoV-2 3CL protease in complex with a dimethyl sulfonyl benzene inhibitor
Classification: HYDROLASE, Viral protein/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-08-22
Authors: Lovell, S., Liu, L., Battaile, K.P., Miller, M.J., Groutas, W.C.
PDB entry 8e60: X-ray structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter WT in an occluded, manganese-bound state
Classification: METAL TRANSPORT
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-08-22
Authors: Ray, S., Gaudet, R.
PDB entry 8e61: Crystal structure of SARS-CoV-2 3CL protease in complex with a m-chlorophenyl dimethyl sulfane inhibitor
Classification: HYDROLASE, Viral protein/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-08-22
Authors: Lovell, S., Liu, L., Battaile, K.P., Madden, T.K., Groutas, W.C.
PDB entry 8e62: STRUCTURE OF Pcryo_0615 from Psychrobacter cryohalolentis, an N-acetyltransferase required to produce Diacetamido-2,3-dideoxy-D-glucuronic acid
Classification: TRANSFERASE
Source organism: Psychrobacter cryohalolentis K5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-08-22
Authors: Hofmeister, D.L., Bockhaus, N.J., Seltzner, C.A., Thoden, J.B., Holden, H.M.
PDB entry 8e63: Crystal structure of SARS-CoV-2 3CL protease in complex with a phenyl sulfane inhibitor
Classification: HYDROLASE, Viral Protein/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-08-22
Authors: Lovell, S., Liu, L., Battaile, K.P., Madden, T.K., Groutas, W.C.
PDB entry 8e64: Crystal structure of SARS-CoV-2 3CL protease in complex with a benzimidazole dimethyl sulfane inhibitor
Classification: HYDROLASE, Viral Protein/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-08-22
Authors: Lovell, S., Liu, L., Battaile, K.P., Madden, T.K., Groutas, W.C.
PDB entry 8e65: Crystal structure of SARS-CoV-2 3CL protease in complex with a p-chlorodimethyl oxybenzene inhibitor
Classification: HYDROLASE, Viral protein/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-08-22
Authors: Lovell, S., Liu, L., Battaile, K.P., Miller, M.J., Groutas, W.C.
PDB entry 8e66: ETV6 H396Y variant bound to DNA containing the sequence GGAA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-08-22
Authors: Scheu, K., Chan, A.C., Murphy, M.E., McIntosh, L.P.
PDB entry 8e67: ETV6 H396Y variant bound to DNA containing the sequence GGAT
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-08-22
Authors: Scheu, K., Chan, A.C., Murphy, M.E., McIntosh, L.P.
PDB entry 8e68: Crystal structure of SARS-CoV-2 3CL protease in complex with a p-fluorodimethyl oxybenzene inhibitor
Classification: HYDROLASE, Viral Protein/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-08-22
Authors: Lovell, S., Liu, L., Battaile, K.P., Miller, M.J., Groutas, W.C.
PDB entry 8e69: Crystal structure of SARS-CoV-2 3CL protease in complex with a m-fluorodimethyl oxybenzene inhibitor
Classification: HYDROLASE, VIRAL PROTEIN/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2022-08-22
Authors: Lovell, S., Liu, L., Battaile, K.P., Miller, M.J., Groutas, W.C.
PDB entry 8e6a: Crystal structure of SARS-CoV-2 3CL protease in complex with a p-chlorophenylethanol based inhibitor
Classification: HYDROLASE, Viral protein/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-08-22
Authors: Lovell, S., Liu, L., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 8e6b: Crystal structure of MERS 3CL protease in complex with a dimethyl sulfinyl benzene inhibitor
Classification: HYDROLASE, Viral protein/Inhibitor
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-08-22
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 8e6c: Crystal structure of MERS 3CL protease in complex with a m-fluorophenyl dimethyl sulfane inhibitor
Classification: HYDROLASE, Viral protein/Inhibitor
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-08-22
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 8e6d: Crystal structure of MERS 3CL protease in complex with a p-fluorophenyl dimethyl sulfane inhibitor
Classification: HYDROLASE, Viral protein/Inhibitor
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-08-22
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 8e6e: Crystal structure of MERS 3CL protease in complex with a phenyl sulfane inhibitor
Classification: HYDROLASE, Viral protein/Inhibitor
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-08-22
Authors: Liu, L., Lovell, S., Battaile, K.P., Madden, T.K., Groutas, W.C.
PDB entry 8e6g: Co-crystal structure of Chaetomium glucosidase with compound 10
Classification: HYDROLASE/INHIBITOR
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-08-22
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 8e6h: X-ray structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter A47W mutant in an occluded, manganese-bound state
Classification: METAL TRANSPORT
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2022-08-22
Authors: Ray, S., Gaudet, R.
PDB entry 8e6i: X-ray structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter M230A mutant in an inward-open, manganese-bound state
Classification: METAL TRANSPORT
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2022-08-22
Authors: Ray, S., Gaudet, R.
PDB entry 8e6j: 3H03 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (A/Brevig Mission/1/1918(H1N1))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-08-22
Authors: Turner, H.L., Ozorowski, G., Ward, A.B.
PDB entry 8e6k: 2H08 Fab in complex with influenza virus neuraminidase from A/Brevig Mission/1/1918 (H1N1)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (A/Brevig Mission/1/1918(H1N1))
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-08-22
Authors: Turner, H.L., Ozorowski, G., Ward, A.B.
PDB entry 8e6l: X-ray structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter D296A mutant in an inward-open, manganese-bound state
Classification: METAL TRANSPORT
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2022-08-22
Authors: Ray, S., Gaudet, R.