LiteFold/PDB huggingface dataset:
PDB entry 8j9t: Crystal Structure of GyraseA N-terminal at 2.43A Resolution
Classification: ISOMERASE
Source organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
Experimental method: X-RAY DIFFRACTION
Resolution: 2.428 Å
Deposited: 2023-05-04
Authors: Salman, M., Sachdeva, E., Das, U., Singh, T.P., Ethayathullah, A.S., Kaur, P.
PDB entry 8j9v: Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and etoposide (EDI-1)
Classification: ISOMERASE/DNA
Source organism: African swine fever virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2023-05-05
Authors: Chang, C.-W., Tsai, M.-D.
PDB entry 8j9w: Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02bDNA and etoposide (EDI-2)
Classification: ISOMERASE/DNA
Source organism: African swine fever virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2023-05-05
Authors: Chang, C.-W., Tsai, M.-D.
PDB entry 8j9x: Cryo-EM structure of the African swine fever virus topoisomerase 2 complexed with Cut02aDNA and m-AMSA (EDI-3)
Classification: ISOMERASE/DNA
Source organism: African swine fever virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-05-05
Authors: Chang, C.-W., Tsai, M.-D.
PDB entry 8j9y: cryo-EM structure of viral topoisomerase in conformation 1
Classification: VIRAL PROTEIN
Source organism: African swine fever virus LIS57
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2023-05-05
Authors: Deng, Z.
PDB entry 8j9z: cryo-EM structure of viral topoisomerase in conformation 2
Classification: VIRAL PROTEIN
Source organism: African swine fever virus LIS57
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-05-05
Authors: Deng, Z.
PDB entry 8ja0: Cryo-EM structure of the NmeCas9-sgRNA-AcrIIC4 ternary complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Haemophilus parainfluenzae; Neisseria meningitidis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2023-05-05
Authors: Yin, H., Li, Z., Yu, G.M., Li, X.Z.
PDB entry 8ja1: ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+ (oxidized form)
Classification: ISOMERASE
Source organism: African swine fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2023-05-05
Authors: Chang, C.-W., Pang, A.H., Tsai, M.-D.
PDB entry 8ja2: ASFV Topoisomerase ATPase domain in complex with AMP-PNP and Mg2+
Classification: ISOMERASE
Source organism: African swine fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2023-05-05
Authors: Pang, A.H., Chang, C.-W., Tsai, M.-D.
PDB entry 8ja3: Structure of beta-arrestin1 in complex with C3aRpp
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2023-05-05
Authors: Maharana, J., Sarma, P., Yadav, M.K., Chami, M., Banerjee, R., Shukla, A.K.
PDB entry 8ja4: Structure of the alginate epimerase/lyase
Classification: ISOMERASE
Source organism: Azotobacter chroococcum NCIMB 8003
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2023-05-05
Authors: Fujiwara, T.
PDB entry 8ja5: Crystal structure of Nipah Virus attachment (G) glycoprotein in complex with neutralizing antibody 14F8
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Nipah henipavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2023-05-05
Authors: Li, Y.H., Huang, X.Y., Xu, J.J., Chen, W.
PDB entry 8ja6: Structure of the alginate epimerase/lyase complexed with tri-mannuronic acid
Classification: ISOMERASE
Source organism: Azotobacter chroococcum NCIMB 8003
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-05
Authors: Fujiwara, T.
PDB entry 8ja7: Cryo-EM structure of Mycobacterium tuberculosis LpqY-SugABC in complex with trehalose
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2023-05-05
Authors: Zhang, B., Liang, J., Rao, Z.
PDB entry 8ja8: Crystal structure of Mycobacterium tuberculosis LpqY with trehalose bound in a closed liganded form
Classification: SUGAR BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-05-05
Authors: Zhang, B., Liang, J., Rao, Z.
PDB entry 8ja9: Crystal structure of Mycobacterium tuberculosis LpqY in complex with trehalose analogue YB-03
Classification: SUGAR BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-05-05
Authors: Zhang, B., Liang, J., Rao, Z.
PDB entry 8jaa: Crystal structure of Mycobacterium tuberculosis LpqY in complex with trehalose analogue YB-04
Classification: SUGAR BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-05-05
Authors: Zhang, B., Liang, J., Rao, Z.
PDB entry 8jab: Crystal structure of Mycobacterium tuberculosis LpqY in complex with trehalose analogue YB-06
Classification: SUGAR BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-05-05
Authors: Zhang, B., Liang, J., Rao, Z.
PDB entry 8jac: Crystal structure of Mycobacterium tuberculosis LpqY in complex with trehalose analogue YB-16
Classification: SUGAR BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-05-05
Authors: Zhang, B., Liang, J., Rao, Z.
PDB entry 8jad: Crystal structure of Mycobacterium tuberculosis LpqY in complex with trehalose analogue YB-17
Classification: SUGAR BINDING PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-05-05
Authors: Zhang, B., Liang, J., Rao, Z.
PDB entry 8jae: Crystal structure of E33A mutant human galectin-10 produced by cell-free protein synthesis in complex with melezitose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2023-05-05
Authors: Kojima, M., Ueno, T., Abe, S., Hirata, K.
PDB entry 8jaf: Structure of Muscarinic receptor (M2R) in complex with beta-arrestin1 (Local Refine, non-cross linked)
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-05-05
Authors: Maharana, J., Sano, F.K., Shihoya, W., Banerjee, R., Nureki, O., Shukla, A.K.
PDB entry 8jag: Cryo-EM structure of SARS-CoV-1 RBD in complex with W328-6H2 (local refinement)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome-related coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2023-05-06
Authors: Nan, X.Y., Li, Y.J.
PDB entry 8jah: Crystal structure of human CLEC12A C-type lectin domain
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2023-05-06
Authors: Lei, Q., Tang, H., Dong, X.
PDB entry 8jai: Crystal Structure of Human H-Ferritin variant 123F assembling in solution 1
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2023-05-06
Authors: Chen, X., Zhao, G.
PDB entry 8jaj: In situ structures of the ultra-long contracted tail of Myoviridae phage P1
Classification: VIRAL PROTEIN
Source organism: Escherichia phage P1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-05-06
Authors: Zhou, J.Q., Liu, H.R.
PDB entry 8jak: Human MCC in MCCU state
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2023-05-06
Authors: Liu, D.S., Su, J.Y., Tian, X.Y.
PDB entry 8jal: Structure of CRL2APPBP2 bound with RxxGP degron (dimer)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-06
Authors: Zhao, S., Zhang, K., Xu, C.
PDB entry 8jam: Cryo-EM structure of Omicron BA.1 RBD in complex with W328-6H2 (local refinement)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome-related coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2023-05-06
Authors: Nan, X.Y., Li, Y.J.
PDB entry 8jan: In situ structures of the ultra-long extended tail of Myoviridae phage P1
Classification: VIRAL PROTEIN
Source organism: Escherichia phage P1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-06
Authors: Zhou, J.Q., Liu, H.R.
PDB entry 8jao: Crystal structure of B1 IMP-1 MBL in complex with 2-amino-5-phenethylthiazole-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.194 Å
Deposited: 2023-05-06
Authors: Yan, Y.-H., Li, G.-B.
PDB entry 8jap: Cryo-EM structure of SARS-CoV-2 WT RBD in complex with W328-6H2 (local refinement)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.81 Å
Deposited: 2023-05-06
Authors: Nan, X.Y., Li, Y.J.
PDB entry 8jaq: Structure of CRL2APPBP2 bound with RxxGP degron (tetramer)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-05-06
Authors: Zhao, S., Zhang, K., Xu, C.
PDB entry 8jar: Structure of CRL2APPBP2 bound with RxxGPAA degron (dimer)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-07
Authors: Zhao, S., Zhang, K., Xu, C.
PDB entry 8jas: Structure of CRL2APPBP2 bound with RxxGPAA degron (tetramer)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2023-05-07
Authors: Zhao, S., Zhang, K., Xu, C.
PDB entry 8jat: Crystal structure of the 3-ketodihydrosphingosine reductase TSC10 from Cryptococcus neoformans
Classification: OXIDOREDUCTASE
Source organism: Cryptococcus neoformans var. neoformans JEC21
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-05-07
Authors: Zhao, P., Kuang, Z.
PDB entry 8jau: Structure of CRL2APPBP2 bound with the C-degron of MRPL28 (dimer)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-05-07
Authors: Zhao, S., Zhang, K., Xu, C.
PDB entry 8jav: Structure of CRL2APPBP2 bound with the C-degron of MRPL28 (tetramer)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2023-05-07
Authors: Zhao, S., Zhang, K., Xu, C.
PDB entry 8jaw: Human MCC in MCCD state
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2023-05-07
Authors: Liu, D.S., Su, J.Y., Tian, X.Y.
PDB entry 8jax: Cryo-EM structure of Holo form of ScBfr with O symmetry
Classification: OXIDOREDUCTASE
Source organism: Streptomyces coelicolor
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2023-05-07
Authors: Jobichen, C., Sivaraman, J.
PDB entry 8jay: CrtSPARTA Octamer bound with guide-target
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Thermoflavifilum thermophilum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-05-07
Authors: Guo, L.J., Huang, P.P., Li, Z.X., Xiao, Y.B., Chen, M.R.
PDB entry 8jaz: Structure of the alginate epimerase/lyase complexed with di-mannuronic acid
Classification: ISOMERASE
Source organism: Azotobacter chroococcum NCIMB 8003
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-05-07
Authors: Fujiwara, T.
PDB entry 8jb0: Cryo-EM structure of Holo form of ScBfr in C1 symmetry
Classification: OXIDOREDUCTASE
Source organism: Streptomyces coelicolor
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-05-07
Authors: Jobichen, C., Sivaraman, J.
PDB entry 8jb1: Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 in complex with NADP
Classification: STRUCTURAL PROTEIN
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2023-05-07
Authors: Son, H.F., Kim, K.J.
PDB entry 8jb3: Structure and allosteric regulation of the inosine 5'-monophosphate-specific phosphatase ISN1 from Saccharomyces cerevisiae
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77382 Å
Deposited: 2023-05-08
Authors: Byun, S.J., Rhee, S.
PDB entry 8jb4: lipopolysaccharide-binding domain-LBDB
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-05-08
Authors: Huang, J., Qin, Z.
PDB entry 8jb5: The cryo-EM structure of Paeniclostridium sordellii lethal toxin (TcsL)
Classification: TOXIN
Source organism: Paeniclostridium sordellii (strain ATCC 9714 / DSM 2141 / JCM 3814 / LMG 15708 / NCIMB 10717 / 211)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-08
Authors: Zhan, X., Tao, L.
PDB entry 8jb7: Crystal structure of CMY-185
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-05-08
Authors: Kawai, A., Doi, Y.
PDB entry 8jb8: Crystal structure of CMY-185 complex with ceftazidime
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-05-08
Authors: Kawai, A., Doi, Y.
PDB entry 8jb9: Solution structure of Anti-CRISPR protein AcrIIC5
Classification: PROTEIN BINDING
Source organism: Simonsiella muelleri
Experimental method: SOLUTION NMR
Deposited: 2023-05-08
Authors: Hong, S.H., Park, C., An, S.Y., Suh, J.Y.
PDB entry 8jba: Discovery and Crystallography Study of Novel Oxadiazole Analogs as Small Molecule PD-1/PD-L1 inhibitors
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-05-08
Authors: Cheng, Y., Xiao, Y.B.
PDB entry 8jbb: Crystal Structure of the Csm6 from Thermus thermophilus HB8 in complex with A2>p
Classification: HYDROLASE
Source organism: Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-05-08
Authors: Lin, Z., Du, L.
PDB entry 8jbc: Crystal Structure of the Csm6 K137A mutant from Thermus thermophilus HB8 in its apo form
Classification: HYDROLASE
Source organism: Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2023-05-08
Authors: Lin, Z., Du, L.
PDB entry 8jbd: Crystal structure of Adenylosuccinate lyase from Thermus thermophilus HB8, TtPurB
Classification: LYASE
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2023-05-08
Authors: Nemoto, N., Kawai, G., Sampei, G.
PDB entry 8jbe: CryoEM Structure of metazoan Mon1-Ccz1-RMC1 complex
Classification: SIGNALING PROTEIN
Source organism: Drosophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-05-08
Authors: Jia, G.W., Yong, X., Su, Z.M., Jia, D.
PDB entry 8jbf: Senktide bound to active human neurokinin 3 receptor in complex with Gq
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculoides; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-05-08
Authors: Sun, W.J., Yang, F., Zhang, H.H., Yuan, Q.N., Yin, W.C., Shi, P., Eric, X., Tian, C.L.
PDB entry 8jbg: Neurokinin B bound to active human neurokinin 3 receptor in complex with Gq
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-05-08
Authors: Sun, W.J., Yang, F., Zhang, H.H., Yuan, Q.N., Yin, W.C., Shi, P., Eric, X., Tian, C.L.
PDB entry 8jbh: Substance P bound to active human neurokinin 3 receptor in complex with Gq
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculoides; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-08
Authors: Sun, W.J., Yang, F., Zhang, H.H., Yuan, Q.N., Yin, W.C., Shi, P., Eric, X., Tian, C.L.
PDB entry 8jbi: SteC 202-375 mutant- C276S
Classification: TRANSFERASE
Source organism: Salmonella typhimurium (strain 14028s / SGSC 2262)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.356 Å
Deposited: 2023-05-09
Authors: Zhang, M., Dai, Y., Li, B.
PDB entry 8jbj: Crystal structure of anti-PVRIG Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-05-09
Authors: Sun, J., Li, X.L., Song, J.
PDB entry 8jbk: Crystal structure of Na+,K+-ATPase in the E1.3Na+ state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-05-09
Authors: Kanai, R., Vilsen, B., Cornelius, F., Toyoshima, C.
PDB entry 8jbl: Crystal structure of Na+,K+-ATPase in the E1.Mg2+ state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-05-09
Authors: Kanai, R., Vilsen, B., Cornelius, F., Toyoshima, C.
PDB entry 8jbm: Crystal structure of Na+,K+-ATPase in the E1.Mn2+ state
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-05-09
Authors: Kanai, R., Vilsen, B., Cornelius, F., Toyoshima, C.
PDB entry 8jbn: Vascular endothelial protein tyrosine phosphatase in complex with Cpd-1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-05-09
Authors: Orita, T., Furuzono, T., Doi, S., Adachi, T.
PDB entry 8jbo: Crystal structure of TxGH116 from Thermoanaerobacterium xylanolyticum with isofagomine
Classification: HYDROLASE
Source organism: Thermoanaerobacterium xylanolyticum LX-11
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-09
Authors: Pengthaisong, S., Ketudat Cairns, J.R.
PDB entry 8jbp: Crystal structure of triosephosphate isomerase from Leishmania orientalis at 1.45 angstroms resolution with an arsenic atom bound at Cys57
Classification: ISOMERASE
Source organism: Leishmania orientalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-05-09
Authors: Kuaprasert, B., Leartsakulpanich, U., Riangrungroj, P., Pornthanakasem, W., Suginta, W., Robinson, R.C., Zhou, Y., Mungthin, M., Leelayoova, S., Saehlee, S., Choowongkomon, K.
PDB entry 8jbq: Pro-alpha-hemolysin of Vibrio campbellii
Classification: TOXIN
Source organism: Vibrio campbellii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-09
Authors: Lin, S.M., Chen, Y.A., Chiu, Y.C.
PDB entry 8jbr: Structure of McyA2-CAPCP
Classification: TOXIN
Source organism: Microcystis aeruginosa PCC 7806
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-09
Authors: Peng, Y.J.
PDB entry 8jbs: B12-binding domain from Chloracidobacterium thermophilum MerR family protein, dark state
Classification: TRANSCRIPTION
Source organism: Chloracidobacterium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-05-09
Authors: Zhang, S., Yu, Y.
PDB entry 8jbt: B12-binding domain from Chloracidobacterium thermophilum MerR family protein, anaerobic light state
Classification: TRANSCRIPTION
Source organism: Chloracidobacterium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-05-09
Authors: Zhang, S., Yu, Y.
PDB entry 8jbv: Extracellular domain of gamma delta TCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2023-05-09
Authors: Xin, W., Chi, X., Huang, B., Su, Q., Zhou, Q.
PDB entry 8jbw: Crystal structure of ZtHPPD-(+)-Usnic acid complex
Classification: OXIDOREDUCTASE
Source organism: Zymoseptoria tritici
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-05-09
Authors: Lin, H.-Y., Dong, J., Yang, G.-F.
PDB entry 8jbx: Human canonical 601 DNA nucleosome
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2023-05-09
Authors: Ding, D.B., Ishibashi, T., Nguyen, T.T.
PDB entry 8jby: Vascular endothelial protein tyrosine phosphatase in complex with Cpd-2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-05-10
Authors: Orita, T., Furuzono, T., Doi, S., Adachi, T.
PDB entry 8jbz: Crystal structure of 3-ketosteroid delta1-dehydrogenase from Rhodococcus erythropolis SQ1 in complex with 4-androstadiene-3,17- dione
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.079 Å
Deposited: 2023-05-10
Authors: Hu, Y.L., Li, X., Cheng, X.Y., Song, S.K., Su, Z.D.
PDB entry 8jc0: V gamma9 V delta2 TCR and CD3 complex in LMNG
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-10
Authors: Xin, W., Huang, B., Chi, X., Xu, M., Zhang, Y., Li, X., Su, Q., Zhou, Q.
PDB entry 8jc1: Crystal structure of Pectocin M1 from Pectobacterium carotovorum
Classification: HYDROLASE
Source organism: Pectobacterium carotovorum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2023-05-10
Authors: Jantarit, N., Kurisu, G., Tanaka, H.
PDB entry 8jc3: Crystal structure of the P450 BM3 heme domain mutant F87A-T268V in complex with Pyd-N-C4-Phe and hydroxylamine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-05-10
Authors: Jiang, Y., Dong, S., Feng, Y., Cong, Z.
PDB entry 8jc4: Crystal structure of the P450 BM3 heme domain mutant F87A-T268V in complex with Pyd-Pid-Phe and hydroxylamine
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium NBRC 15308 = ATCC 14581
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2023-05-10
Authors: Jiang, Y., Dong, S., Feng, Y., Cong, Z.
PDB entry 8jc5: Crystal structure of PLEKHM1 RUN domain in complex with GTP-bound Arl8b(Q75L)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-05-10
Authors: Qiu, X.H., Pan, L.F.
PDB entry 8jc6: Crystal structure of Mpox virus A41L protein
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2023-05-10
Authors: Jiang, H.H., Li, J., Zhang, J.
PDB entry 8jc7: Cryo-EM structure of Vibrio campbellii alpha-hemolysin
Classification: TOXIN
Source organism: Vibrio campbellii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2023-05-10
Authors: Wang, C.H., Yeh, M.K., Ho, M.C., Lin, S.M.
PDB entry 8jc8: Cryo-EM structure of the LH1 complex from thermochromatium tepidum
Classification: PHOTOSYNTHESIS
Source organism: Thermochromatium tepidum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2023-05-10
Authors: Wang, G.-L., Yan, Y.-H., Yu, L.-J.
PDB entry 8jc9: Cryo-EM structure of the LH1 complex from thermochromatium tepidum
Classification: PHOTOSYNTHESIS
Source organism: Thermochromatium tepidum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2023-05-10
Authors: Wang, G.-L., Yan, Y.-H., Yu, L.-J.
PDB entry 8jca: Cyrstal structure of SKIP RUN domain in complex with GTP-bound Arl8b(Q75L)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-05-10
Authors: Qiu, X.H., Pan, L.F.
PDB entry 8jcb: Vgamma5 Vdelta1 T cell receptor complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.5 Å
Deposited: 2023-05-10
Authors: Xin, W., Huang, B., Chi, X., Xu, M., Zhang, Y., Li, X., Su, Q., Zhou, Q.
PDB entry 8jcc: Human histone H2B variant H2BFWT Cryo-EM structure with 601 DNA sequence
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-05-10
Authors: Ding, D.B., Ishibashi, T.
PDB entry 8jcd: Human H2BFWTH100R nucleosome with 601 DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2023-05-11
Authors: Ding, D.B., Ishibashi, T., Nguyen, T.T.
PDB entry 8jce: Cryo-EM Structure of Chikungunya Virus Nonstructural Protein 1 with m7GpppAmU
Classification: VIRAL PROTEIN
Source organism: Chikungunya virus strain S27-African prototype
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2023-05-11
Authors: Zhang, K., Law, M.C.Y., Nguyen, T.M., Tan, Y.B., Wirawan, M., Law, Y.S., Luo, D.H.
PDB entry 8jch: Cryo-EM structure of yeast Rat1-bound Pol II pre-termination transcription complex 1 (Pol II Rat1-PTTC1)
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-05-11
Authors: Zeng, Y., Zhang, Y.
PDB entry 8jcj: The crystal structure of SARS-CoV-2 main protease in complex with Compound 18
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-05-11
Authors: Zhao, Y., Zhu, Y., Rao, Z.
PDB entry 8jck: The crystal structure of SARS-CoV-2 main protease in complex with Compound 32
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-05-11
Authors: Zhao, Y., Zhu, Y., Rao, Z.
PDB entry 8jcl: The crystal structure of SARS-CoV-2 main protease in complex with Compound 52
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2023-05-11
Authors: Zhao, Y., Zhu, Y., Rao, Z.
PDB entry 8jcm: The crystal structure of SARS-CoV-2 main protease in complex with Compound 55
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-05-11
Authors: Zhao, Y., Zhu, Y., Rao, Z.
PDB entry 8jcn: The crystal structure of SARS-CoV-2 main protease in complex with Compound 58
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2023-05-11
Authors: Zhao, Y., Zhu, Y., Rao, Z.
PDB entry 8jco: The crystal structure of SARS-CoV-2 main protease in complex with Compound 65
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-05-11
Authors: Zhao, Y., Zhu, Y., Rao, Z.
PDB entry 8jcq: Crystal structure of calotropain FI from Calotropis gigantea
Classification: HYDROLASE
Source organism: Calotropis gigantea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-05-11
Authors: Kumar, A., Jamdar, S.N., Srivastava, G., Makde, R.D.
PDB entry 8jcr: Crystal structure of Calotropain FI from Calotropis gigantea (pH 6.0)
Classification: HYDROLASE
Source organism: Calotropis gigantea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-05-11
Authors: Kumar, A., Jamdar, S.N., Srivastava, G., Makde, R.D.
PDB entry 8jcs: Crystal structure of Procerain-B from Calotropis gigantea
Classification: HYDROLASE
Source organism: Calotropis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2023-05-11
Authors: Kumar, A., Jamdar, S.N., Srivastava, G., Makde, R.D.
PDB entry 8jct: Crystal structure of fungal cutinase from Aspergillus fumigatiaffinis
Classification: HYDROLASE
Source organism: Aspergillus fumigatiaffinis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-05-11
Authors: Kim, M., Lee, S.H., Kim, K.-J.
PDB entry 8jcu: Cryo-EM structure of mGlu2-mGlu3 heterodimer in presence of LY341495 (dimerization mode I)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Zhao, Q., Wu, B.
PDB entry 8jcv: Cryo-EM structure of mGlu2-mGlu3 heterodimer in presence of LY341495 (dimerization mode II)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Zhao, Q., Wu, B.
PDB entry 8jcw: Cryo-EM structure of mGlu2-mGlu3 heterodimer in presence of LY341495 and NAM563 (dimerization mode I)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jcx: Cryo-EM structure of mGlu2-mGlu3 heterodimer in presence of LY341495 and NAM563 (dimerization mode II)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jcy: Cryo-EM structure of mGlu2-mGlu3 heterodimer in presence of LY341495, NAM563, and LY2389575 (dimerization mode I)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jcz: Cryo-EM structure of mGlu2-mGlu3 heterodimer in presence of LY341495, NAM563, and LY2389575 (dimerization mode III)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jd0: Cryo-EM structure of mGlu2-mGlu3 heterodimer in presence of NAM563
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jd1: Cryo-EM structure of mGlu2-mGlu3 heterodimer in Rco state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jd2: Cryo-EM structure of G protein-free mGlu2-mGlu3 heterodimer in Acc state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jd3: Cryo-EM structure of Gi1-bound mGlu2-mGlu3 heterodimer
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jd4: Cryo-EM structure of G protein-free mGlu2-mGlu4 heterodimer in Acc state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jd5: Cryo-EM structure of Gi1-bound mGlu2-mGlu4 heterodimer
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Zhao, Q., Wu, B.
PDB entry 8jd6: Cryo-EM structure of Gi1-bound metabotropic glutamate receptor mGlu4
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-12
Authors: Wang, X., Wang, M., Xu, T., Feng, Y., Han, S., Lin, S., Zhao, Q., Wu, B.
PDB entry 8jd7: endo-1,3-fucanase GH174A
Classification: HYDROLASE
Source organism: Wenyingzhuangia sp. OF219
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-05-12
Authors: Chen, G.N., Chang, Y.G., Zhang, Y.Y.
PDB entry 8jd8: Crystal structure of Citrus limon Cu-Zn superoxide dismutase
Classification: OXIDOREDUCTASE
Source organism: Citrus limon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2023-05-12
Authors: Utami, R.A., Yoshida, H., Retnoningrum, D.S., Ismaya, W.T.
PDB entry 8jd9: Cyro-EM structure of the Na+/H+ antipoter SOS1 from Arabidopsis thaliana,class1
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-05-13
Authors: Yang, G.H., Zhang, Y.M., Zhou, J.Q., Jia, Y.T., Xu, X., Fu, P., Wu, H.Y.
PDB entry 8jda: Cyro-EM structure of the Na+/H+ antipoter SOS1 from Arabidopsis thaliana,class2
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2023-05-13
Authors: Yang, G.H., Zhang, Y.M., Zhou, J.Q., Jia, Y.T., Xu, X., Fu, P., Wu, H.Y.
PDB entry 8jdb: Crystal structure of H405A mLDHD in complex with D-2-hydroxyoctanoic acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-05-13
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdc: Crystal structure of mLDHD in apo form
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.696 Å
Deposited: 2023-05-13
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdd: Crystal structure of H405A mLDHD in apo form
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-05-13
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jde: Crystal structure of mLDHD in complex with D-lactate
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.729 Å
Deposited: 2023-05-13
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdf: Crystal structure of H405A mLDHD in complex with D-lactate
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-05-13
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdg: Crystal structure of H405A mLDHD in complex with D-2-hydroxybutanoic acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2023-05-14
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdh: Crystal structure of anti-CRISPR AcrIF25
Classification: DNA BINDING PROTEIN
Source organism: Alcanivorax sp. KX64203
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-05-14
Authors: Yang, J., Wang, J., Wang, Y.
PDB entry 8jdi: Crystal structure of Cas7-AcrIF25 complex
Classification: DNA BINDING PROTEIN/INHIBITOR
Source organism: Alcanivorax sp. KX64203; Pseudomonas aeruginosa UCBPP-PA14
Experimental method: X-RAY DIFFRACTION
Resolution: 3.372 Å
Deposited: 2023-05-14
Authors: Yang, J., Wang, J., Wang, Y.
PDB entry 8jdj: Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)
Classification: RIBOSOME
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-05-14
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 8jdk: Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.26 Å
Deposited: 2023-05-14
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 8jdl: Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2023-05-14
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 8jdm: Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)
Classification: RIBOSOME
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2023-05-14
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Suzuki, T.
PDB entry 8jdn: Crystal structure of H405A mLDHD in complex with D-2-hydroxyvaleric acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdo: Crystal structure of H405A mLDHD in complex with D-2-hydroxyhexanoic acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdp: Crystal structure of H405A mLDHD in complex with D-2-hydroxyisovaleric acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdq: Crystal structure of H405A mLDHD in complex with D-2-hydroxyisocaproic acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdr: Crystal structure of H405A mLDHD in complex with D-2-hydroxy-3-methyl-valeric acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jds: Crystal structure of mLDHD in complex with Pyruvate
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.636 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdt: Crystal structure of mLDHD in complex with 2-ketobutanoic acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdu: Crystal structure of mLDHD in complex with 2-ketovaleric acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdv: Crystal structure of mLDHD in complex with 2-ketohexanoic acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdw: CRYSTAL STRUCTURE OF HUMAN L-ARGININE:GLYCINE AMIDINOTRANSFERASE IN COMPLEX WITH L-ALANINE
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1998-10-12
Authors: Fritsche, E., Humm, A., Huber, R.
PDB entry 8jdx: Crystal structure of mLDHD in complex with 2-ketoisovaleric acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdy: Crystal structure of mLDHD in complex with 2-ketoisocaproic acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8jdz: Crystal structure of mLDHD in complex with 2-keto-3-methylvaleric acid
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-05-15
Authors: Jin, S., Chen, X., Yang, J., Ding, J.
PDB entry 8je0: A novel amidohydrolase
Classification: HYDROLASE
Source organism: Klebsiella sp. PCX
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-05-15
Authors: Ma, D., Feng, R.
PDB entry 8je1: An asymmetry dimer of the Cul2-Rbx1-EloBC-FEM1B ubiquitin ligase complexed with BEX2
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2023-05-15
Authors: Dai, Z., Liang, L., Yin, Y.X.
PDB entry 8je2: Cryo-EM structure of neddylated Cul2-Rbx1-EloBC-FEM1B complexed with FNIP1-FLCN
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2023-05-15
Authors: Dai, Z., Liang, L., Yin, Y.X.
PDB entry 8je4: Crystal structure of LimF prenyltransferase (H239G/W273T mutant) bound with the thiodiphosphate moiety of farnesyl S-thiolodiphosphate (FSPP)
Classification: TRANSFERASE
Source organism: Limnothrix sp. CACIAM 69d
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2023-05-15
Authors: Hamada, K., Oguni, A., Zhang, Y., Satake, M., Goto, Y., Suga, H., Ogata, K., Sengoku, T.
PDB entry 8je5: Crystal Structure of Anopheles culicifacies Prolyl-tRNA Synthetase (AcPRS) in complex with Halofuginone
Classification: LIGASE/INHIBITOR
Source organism: Anopheles culicifacies
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2023-05-15
Authors: Goswami, R., Manickam, Y., Chhibber-Goel, J., Harlos, K., Sharma, A.
PDB entry 8je6: Crystal Structure of Anopheles culicifacies Prolyl-tRNA Synthetase (AcPRS) in complex with Halofuginone and ATP analogue
Classification: LIGASE/INHIBITOR
Source organism: Anopheles culicifacies
Experimental method: X-RAY DIFFRACTION
Resolution: 2.883 Å
Deposited: 2023-05-15
Authors: Goswami, R., Manickam, Y., Gupta, S., Chhibber-Goel, J., Harlos, K., Sharma, A.
PDB entry 8je7: Crystal Structure of Anopheles culicifacies Prolyl-tRNA Synthetase (AcPRS) in complex with two inhibitors (Halofuginone and L95)
Classification: LIGASE/INHIBITOR
Source organism: Anopheles culicifacies
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2023-05-15
Authors: Goswami, R., Manickam, Y., Chhibber-Goel, J., Harlos, K., Sharma, A.
PDB entry 8je9: Crystal structure of CGL1 from Crassostrea gigas, mannobiose-bound form (CGL1/Man(alpha)1-2Man)
Classification: SUGAR BINDING PROTEIN
Source organism: Crassostrea gigas
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2023-05-15
Authors: Unno, H., Hatakeyama, T.
PDB entry 8jea: Crystal structure of CGL1 from Crassostrea gigas, mannotriose-bound form (CGL1/Man(alpha)1-2Man(alpha)1-2Man)
Classification: SUGAR BINDING PROTEIN
Source organism: Crassostrea gigas
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2023-05-15
Authors: Unno, H., Hatakeyama, T.
PDB entry 8jeb: Crystal structure of CGL1 from Crassostrea gigas, mannotetraose-bound form (CGL1/Man(alpha)1-2Man(alpha)1-2Man(alpha)1-6Man)
Classification: SUGAR BINDING PROTEIN
Source organism: Crassostrea gigas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-05-15
Authors: Unno, H., Hatakeyama, T.
PDB entry 8jec: plant potassium channel SKOR mutant - L271P/D312N
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-05-15
Authors: Liu, S., Li, S., Tian, C.
PDB entry 8jed: Crystal structure of mRNA cap (guanine-N7) methyltransferase E12 subunit from monkeypox virus and discovery of its inhibitors
Classification: TRANSFERASE
Source organism: Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2023-05-15
Authors: Wang, D., Zhao, R., Shu, W., Hu, W., Wang, M., Cao, J., Zhou, X.
PDB entry 8jee: Crystal Structure of Human Carbonic Anhydrase II In-complex with Levosulpiride at 2.96 A Resolution
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2023-05-15
Authors: Rasheed, S., Huda, N., Falke, S., Fisher, S.Z., Ahmad, M.S.
PDB entry 8jef: Cryo-EM Structure of the 3HO-HCAR3-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2023-05-15
Authors: Fang, Y., Pan, X.
PDB entry 8jei: Cryo-EM Structure of the compuond 5c-HCAR3-Gi complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2023-05-15
Authors: Fang, Y., Pan, X.
PDB entry 8jej: Cryo-EM Structure of Na-dithionite Reduced Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus
Classification: OXIDOREDUCTASE
Source organism: Gluconobacter japonicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-05-16
Authors: Suzuki, Y., Miyata, T., Makino, F., Tanaka, H., Namba, K., Sowa, K., Kitazumi, Y., Shirai, O.
PDB entry 8jek: Cryo-EM Structure of K-ferricyanide Oxidized Membrane-bound Fructose Dehydrogenase from Gluconobacter japonicus
Classification: OXIDOREDUCTASE
Source organism: Gluconobacter japonicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-05-16
Authors: Suzuki, Y., Miyata, T., Makino, F., Tanaka, H., Namba, K., Sowa, K., Kitazumi, Y., Shirai, O.
PDB entry 8jel: Crystal structure of TIGIT in complexed with Ociperlimab, crystal form I
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-05-16
Authors: Sun, J., Zhang, X.X., Song, J.
PDB entry 8jem: DltB tetramer in complex with inhibitor m-AMSA
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Streptococcus thermophilus LMG 18311
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2023-05-16
Authors: Zhang, P., Liu, Z.
PDB entry 8jen: Crystal structure of TIGIT in complexed with Ociperlimab, crystal form II
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2023-05-16
Authors: Sun, J., Zhang, X.X., Song, J.
PDB entry 8jeo: Crystal structure of TIGIT in complexed with Tiragolumab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2023-05-16
Authors: Sun, J., Zhang, X.X., Song, J.
PDB entry 8jep: Crystal structure of Ociperlimab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-05-16
Authors: Sun, J., Zhang, X.X., Song, J.
PDB entry 8jeq: Crystal structure of Tiragolumab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-05-16
Authors: Sun, J., Zhang, X.X., Song, J.
PDB entry 8jer: Structure of Acipimox-GPR109A-G protein complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2023-05-16
Authors: Yadav, M.K., Sarma, P., Chami, M., Banerjee, R., Shukla, A.K.
PDB entry 8jes: Cryo-EM structure of DltB homo-tetramer
Classification: MEMBRANE PROTEIN
Source organism: Streptococcus thermophilus LMG 18311
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-05-16
Authors: Zhang, P., Liu, Z.