LiteFold/PDB huggingface dataset:
PDB entry 7dwr: Structure of Sulfolobus solfataricus SegA-ADP complex bound to DNA
Classification: DNA BINDING PROTEIN
Source organism: Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-01-17
Authors: Yen, C.Y., Lin, M.G., Hsiao, C.D., Sun, Y.J.
PDB entry 7dws: The structure of T4 Lysozyme I3C/C54T/R125C/E128C complex with Zinc ions
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-01-17
Authors: Chen, X., Chen, S.
PDB entry 7dwt: Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle)
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Dengue virus 1; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 19 Å
Deposited: 2021-01-18
Authors: Fibriansah, G., Ng, T.S., Kostyuchenko, V.A., Shi, J., Lok, S.M.
PDB entry 7dwu: Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 2 particle)
Classification: VIRUS/IMMUNE SYSTEM
Source organism: Dengue virus 1; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 19 Å
Deposited: 2021-01-18
Authors: Fibriansah, G., Ng, T.S., Kostyuchenko, V.A., Shi, J., Lok, S.M.
PDB entry 7dwv: Cryo-EM structure of amyloid fibril formed by familial prion disease-related mutation E196K
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2021-01-18
Authors: Wang, L.Q., Zhao, K., Yuan, H.Y., Li, X.N., Dang, H.B., Ma, Y.Y., Wang, Q., Wang, C., Sun, Y.P., Chen, J., Li, D., Zhang, D.L., Yin, P., Liu, C., Liang, Y.
PDB entry 7dww: Crystal structure of the computationally designed msDPBB_sym2 protein
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.802 Å
Deposited: 2021-01-18
Authors: Yagi, S., Schiex, T., Vucinic, J., Barbe, S., Simoncini, D., Tagami, S.
PDB entry 7dwx: Conformation 1 of S-ACE2-B0AT1 ternary complex
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.3 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dwy: S protein of SARS-CoV-2 in the locked conformation
Classification: VIRUS
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dwz: S protein of SARS-CoV-2 in the active conformation
Classification: VIRUS
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dx0: Trypsin-digested S protein of SARS-CoV-2
Classification: VIRUS
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dx1: S protein of SARS-CoV-2 D614G mutant
Classification: VIRUS
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dx2: Trypsin-digested S protein of SARS-CoV-2 D614G mutant
Classification: VIRUS
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dx3: S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 1 (1 up RBD and no PD bound)
Classification: VIRUS
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dx4: The structure of FC08 Fab-hA.CE2-RBD complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-01-18
Authors: Cao, L., Wang, X.
PDB entry 7dx5: S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 2 (1 up RBD and 1 PD bound)
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dx6: S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 3 (2 up RBD and 1 PD bound)
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dx7: Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 1 (1 up RBD and 1 PD bound)
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dx8: Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 2 (2 up RBD and 2 PD bound)
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dx9: Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 3 (3 up RBD and 2 PD bound)
Classification: VIRUS
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-01-18
Authors: Yan, R.H., Zhang, Y.Y., Li, Y.N., Ye, F.F., Guo, Y.Y., Xia, L., Zhong, X.Y., Chi, X.M., Zhou, Q.
PDB entry 7dxa: PSII intermediate Psb28-RC47
Classification: PLANT PROTEIN
Source organism: Thermosynechococcus vulcanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2021-01-18
Authors: Sui, S.F., Shen, J.R., Han, G.Y., Xiao, Y.N., Huang, G.Q.
PDB entry 7dxb: Structure of TRPC3 at 2.7 angstrom in high calcium state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-01-18
Authors: Chen, L., Guo, W.
PDB entry 7dxc: Structure of TRPC3 at 3.06 angstrom in low calcium state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2021-01-18
Authors: Chen, L., Guo, W.
PDB entry 7dxd: Structure of TRPC3 at 3.9 angstrom in 1340 nM free calcium state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-01-18
Authors: Chen, L., Guo, W.
PDB entry 7dxe: Structure of TRPC3 gain of function mutation R803C at 3.2 angstrom in 1340nM free calcium state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-01-18
Authors: Chen, L., Guo, W.
PDB entry 7dxf: Structure of BTDM-bound human TRPC6 nanodisc at 2.9 angstrom in high calcium state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-01-18
Authors: Chen, L., Guo, W.
PDB entry 7dxg: Structure of SAR7334-bound TRPC6 at 2.9 angstrom
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-01-18
Authors: Chen, L., Guo, W.
PDB entry 7dxh: Cryo-EM structure of PSII intermediate Psb28-PSII complex
Classification: PLANT PROTEIN
Source organism: Thermosynechococcus vulcanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2021-01-18
Authors: Sui, S.F., Shen, J.R., Han, G.Y., Xiao, Y.N., Huang, G.Q.
PDB entry 7dxi: Structure of Drosophila melanogaster GlcNAc-1-phosphotransferase
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2021-01-19
Authors: Du, S., Xiao, J., Guopeng, W.
PDB entry 7dxj: Human 46QHuntingtin-HAP40 complex structure
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-01-19
Authors: Guo, Q., Fernandez-Busnadiego, R.
PDB entry 7dxk: Human 128QHuntingtin-HAP40 complex structure
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-01-19
Authors: Guo, Q., Fernandez-Busnadiego, R.
PDB entry 7dxl: Fragment-based Lead Discovery of Indazole-based Compounds as AXL Kinase Inhibitors
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.146 Å
Deposited: 2021-01-19
Authors: Anantharajan, J., Baburajendran, N.
PDB entry 7dxm: Crystal structure of DltD
Classification: TRANSFERASE
Source organism: Streptococcus thermophilus LMG 18311
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2021-01-19
Authors: Yan, X.X., Zeng, Q., Tian, L.F.
PDB entry 7dxn: Plant growth-promoting factor YxaL from Bacillus velezensis
Classification: PROTEIN BINDING
Source organism: Bacillus velezensis FZB42
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-01-19
Authors: Baek, Y., Ha, N.-C.
PDB entry 7dxo: The mutant of bifunctional thioesterase catalyzing epimerization and cyclization
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces abietis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-01-19
Authors: Yu, J.H., Song, J., Chi, C.B., Ma, M.
PDB entry 7dxp: Influenza H5N1 nucleoprotein in complex with nucleotides
Classification: VIRAL PROTEIN/RNA
Source organism: Influenza A virus (A/Hong Kong/483/1997(H5N1)); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-01-19
Authors: Tang, Y.S., Xu, S., Chen, Y.W., Wang, J.H., Shaw, P.C.
PDB entry 7dxq: Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
Classification: TRANSFERASE
Source organism: Synechococcus elongatus (strain PCC 7942 / FACHB-805)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-01-20
Authors: Furuike, Y., Akiyama, S.
PDB entry 7dxr: Crystal structure of the mk2h peptide homodimer.
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-20
Authors: Yagi, S., Tagami, S.
PDB entry 7dxs: Crystal structure of the ap1h peptide homodimer.
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2021-01-20
Authors: Yagi, S., Tagami, S.
PDB entry 7dxt: Crystal structure of the chemically synthesized mk2h peptide homodimer
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-01-20
Authors: Yagi, S., Tagami, S.
PDB entry 7dxu: Crystal structure of the mk2h_deltaP peptide homodimer
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.314 Å
Deposited: 2021-01-20
Authors: Yagi, S., Tagami, S.
PDB entry 7dxv: Crystal structure of the mk2h_deltaY peptide homodimer
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2021-01-20
Authors: Yagi, S., Tagami, S.
PDB entry 7dxw: Crystal structure of the mk2h_deltaMIL peptide homodimer
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.509 Å
Deposited: 2021-01-20
Authors: Yagi, S., Tagami, S.
PDB entry 7dxx: Crystal structure of the mk2h_deltaMILPS peptide homodimer
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.403 Å
Deposited: 2021-01-20
Authors: Yagi, S., Tagami, S.
PDB entry 7dxy: Crystal structure of the chemically synthesized mk2h_deltaMILPS peptide homodimer
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-01-20
Authors: Yagi, S., Tagami, S.
PDB entry 7dxz: Crystal structure of the chemically synthesized mk2h_deltaMILPYS peptide homodimer in complex with malonate
Classification: CHAPERONE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-01-20
Authors: Yagi, S., Tagami, S.
PDB entry 7dy0: 1.93 A cryo-EM structure of streptavidin
Classification: CYTOSOLIC PROTEIN
Source organism: Streptomyces avidinii
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.93 Å
Deposited: 2021-01-20
Authors: Hiraizumi, M., Yamashita, K., Nishizawa, T., Kikkawa, M., Nureki, O.
PDB entry 7dy1: Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
Classification: TRANSFERASE
Source organism: Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-01-20
Authors: Furuike, Y., Akiyama, S.
PDB entry 7dy2: Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
Classification: TRANSFERASE
Source organism: Synechococcus elongatus (strain PCC 7942 / FACHB-805)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2021-01-20
Authors: Furuike, Y., Akiyama, S.
PDB entry 7dy3: High resolution crystal structure of hemoglobin M Iwate.
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-01-20
Authors: Ohki, M., Park, S.-Y.
PDB entry 7dy4: High resolution crystal structure of hemoglobin M Boston.
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-01-20
Authors: Ohki, M., Park, S.-Y.
PDB entry 7dy5: Structure of the ternary complex of peptidoglycan recognition protein-short (PGRP-S) with hexanoic acid and tartaric acid at 2.30A resolution
Classification: IMMUNE SYSTEM
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-01-20
Authors: Maurya, A., Viswanathan, V., Sharma, P., Sharma, S., Singh, T.P.
PDB entry 7dy6: A refined cryo-EM structure of an Escherichia coli RNAP-promoter open complex (RPo) with SspA
Classification: TRANSCRIPTION
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2021-01-20
Authors: Lin, W.
PDB entry 7dy7: Discovery of Novel Small-molecule Inhibitors of PD-1/PD-L1 Axis that Promotes PD-L1 Internalization and Degradation
Classification: IMMUNOSUPPRESSANT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2021-01-20
Authors: Cheng, Y., Wang, T.Y., Lu, M.L., Jiang, S., Xiao, Y.B.
PDB entry 7dy8: Thermotoga maritima ferritin mutant-FLAL
Classification: RECOMBINATION
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.103 Å
Deposited: 2021-01-20
Authors: Zhang, X., Zhao, G.
PDB entry 7dy9: Thermotoga maritima ferritin mutant-FLAL
Classification: RECOMBINATION
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.303 Å
Deposited: 2021-01-20
Authors: Zhao, G., Zhang, X.
PDB entry 7dya: Crystal structure of TmFtn with calcium ions
Classification: PROTEIN BINDING
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.197 Å
Deposited: 2021-01-20
Authors: Zhang, X., Zhao, G.
PDB entry 7dyb: Thermotoga maritima ferritin mutant-FLAL-L
Classification: RECOMBINATION
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.779 Å
Deposited: 2021-01-20
Authors: Zhao, G., Zhang, X.
PDB entry 7dyc: Crystal structure of the chemically synthesized mk2h_deltaMILPYS peptide homodimer in complex with malate
Classification: CHAPERONE
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-01-21
Authors: Yagi, S., Tagami, S.
PDB entry 7dyd: Crystal structure of MERS-CoV N-NTD complexed with ligand P4-2
Classification: VIRAL PROTEIN
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-01-21
Authors: Hou, M.H., Lin, S.M., Hsu, J.N.
PDB entry 7dye: Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
Classification: TRANSFERASE
Source organism: Synechococcus elongatus (strain PCC 7942 / FACHB-805)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-01-21
Authors: Furuike, Y., Akiyama, S.
PDB entry 7dyg: Histone lysine demethylase 4D (KDM4D) in complex with the inhibitor 2-(1H-pyrazol-3-yl)isonicotinic acid
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-01-21
Authors: Wang, T., Yang, L.
PDB entry 7dyi: Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
Classification: TRANSFERASE
Source organism: Synechococcus elongatus (strain PCC 7942 / FACHB-805)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2021-01-21
Authors: Furuike, Y., Akiyama, S.
PDB entry 7dyj: Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
Classification: TRANSFERASE
Source organism: Synechococcus elongatus (strain PCC 7942 / FACHB-805)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-01-22
Authors: Furuike, Y., Akiyama, S.
PDB entry 7dyk: Crystal Structure of Cyanobacterial Circadian Clock Protein KaiC
Classification: TRANSFERASE
Source organism: Synechococcus elongatus (strain PCC 7942 / FACHB-805)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2021-01-22
Authors: Furuike, Y., Akiyama, S.
PDB entry 7dym: Pseudomonas aeruginosa TseT-TsiT complex
Classification: TOXIN
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2021-01-22
Authors: She, Z.
PDB entry 7dyn: Phosphorylation of MHC I peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-01-22
Authors: Sun, M.W., Feng, L., Qi, J.X., Liu, W.J.
PDB entry 7dyq: Crystal structure of histone lysine demethylase 4D (KDM4D) in complex with the inhibitor 5-hydroxy-2-methylpyrazolo[1,5-a]pyrido[3,2-e]pyrimidine-3-carbonitrile
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.998 Å
Deposited: 2021-01-22
Authors: Wang, T., Yang, L.
PDB entry 7dyr: CryoEM Structure of Mannose Transporter ManYZ and Microcin E492 (MceA) complex
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli (strain K12); Klebsiella pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.28 Å
Deposited: 2021-01-22
Authors: Wang, J.W., Zeng, J.W.
PDB entry 7dys: CryoEM structure of full length mouse TRPML2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2021-01-22
Authors: Song, X.J., Li, J., Duan, J.J., Zhang, J.
PDB entry 7dyt: Human JMJD5 in complex with MN and 5-((4-methoxybenzyl)amino)pyridine-2,4-dicarboxylic acid.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2021-01-23
Authors: Nakashima, Y., Brewitz, L., Schofield, C.J.
PDB entry 7dyu: Human JMJD5 in complex with MN and 5-((4-phenylbutyl)amino)pyridine-2,4-dicarboxylic acid.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2021-01-23
Authors: Nakashima, Y., Brewitz, L., Schofield, C.J.
PDB entry 7dyv: Human JMJD5 in complex with MN and 5-(benzylamino)pyridine-2,4-dicarboxylic acid.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-01-23
Authors: Nakashima, Y., Brewitz, L., Schofield, C.J.
PDB entry 7dyw: Human JMJD5 in complex with MN and 5-((2-methoxybenzyl)amino)pyridine-2,4-dicarboxylic acid.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2021-01-23
Authors: Nakashima, Y., Brewitz, L., Schofield, C.J.
PDB entry 7dyx: Human JMJD5 in complex with MN and 5-((2-cyclopropylbenzyl)amino)pyridine-2,4-dicarboxylic acid.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2021-01-23
Authors: Nakashima, Y., Brewitz, L., Schofield, C.J.
PDB entry 7dyy: Crystal structure of VIM-2 MBL in complex with 1-((2-aminobenzo[d]thiazol-6-yl)methyl)-1H-imidazole-2-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.798 Å
Deposited: 2021-01-23
Authors: Yan, Y.-H., Li, G.-B.
PDB entry 7dyz: Crystal structure of VIM-2 MBL in complex with 1-(but-3-en-1-yl)-4-methyl-1H-imidazole-2-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.902 Å
Deposited: 2021-01-23
Authors: Yan, Y.-H., Li, G.-B.
PDB entry 7dz0: Crystal structure of VIM-2 MBL in complex with 1-(but-3-en-1-yl)-5-methyl-1H-imidazole-2-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.227 Å
Deposited: 2021-01-23
Authors: Yan, Y.-H., Li, G.-B.
PDB entry 7dz1: Crystal structure of VIM-2 MBL in complex with 1-benzyl-5-methyl-1H-imidazole-2-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.708 Å
Deposited: 2021-01-23
Authors: Yan, Y.-H., Li, G.-B.
PDB entry 7dz2: Crystal structures of D-allulose 3-epimerase from Sinorhizobium fredii
Classification: ISOMERASE
Source organism: Sinorhizobium fredii CCBAU 83666
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-01-23
Authors: Zhu, Z.L., Miyakawa, T., Tanokura, M., Lu, F.P., Qin, H.-M.
PDB entry 7dz3: Crystal structures of D-allulose 3-epimerase with D-fructose from Sinorhizobium fredii
Classification: ISOMERASE
Source organism: Sinorhizobium fredii CCBAU 83666
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2021-01-23
Authors: Zhu, Z.L., Miyakawa, T., Tanokura, M., Lu, F.P., Qin, H.-M.
PDB entry 7dz4: Crystal structures of D-allulose 3-epimerase with D-tagatose from Sinorhizobium fredii
Classification: ISOMERASE
Source organism: Sinorhizobium fredii CCBAU 83666
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2021-01-23
Authors: Zhu, Z.L., Miyakawa, T., Tanokura, M., Lu, F.P., Qin, H.-M.
PDB entry 7dz5: Crystal structures of D-allulose 3-epimerase with D-sorbose from Sinorhizobium fredii
Classification: ISOMERASE
Source organism: Sinorhizobium fredii CCBAU 83666
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-01-23
Authors: Zhu, Z.L., Miyakawa, T., Tanokura, M., Lu, F.P., Qin, H.-M.
PDB entry 7dz6: Crystal structures of D-allulose 3-epimerase with D-allulose from Sinorhizobium fredii
Classification: ISOMERASE
Source organism: Sinorhizobium fredii CCBAU 83666
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-01-23
Authors: Zhu, Z.L., Miyakawa, T., Tanokura, M., Lu, F.P., Qin, H.-M.
PDB entry 7dz7: State transition supercomplex PSI-LHCI-LHCII from double phosphatase mutant pph1;pbcp of green alga Chlamydomonas reinhardtii
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2021-01-23
Authors: Pan, X.W., Li, A.J., Liu, Z.F., Li, M.
PDB entry 7dz8: State transition supercomplex PSI-LHCI-LHCII from the LhcbM1 lacking mutant of Chlamydomonas reinhardtii
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2021-01-23
Authors: Pan, X.W., Li, A.J., Liu, Z.F., Li, M.
PDB entry 7dz9: MbnABC complex
Classification: PEPTIDE BINDING PROTEIN
Source organism: Vibrio caribbeanicus ATCC BAA-2122
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-01-25
Authors: Chao, D., Dan, Z., Yijun, G., Wei, C.
PDB entry 7dzd: Crystal structure of uPA in complex with cleaved camostat
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-01-25
Authors: Jiang, L.G., Huang, M.D.
PDB entry 7dze: Fabp ground state captured by XFELs
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-01-25
Authors: Li, H., Yu, L.-J., Liu, X., Shen, J.-R., Wang, J.
PDB entry 7dzf: Intermediate of FABP with a delay time of 10 ns
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-01-25
Authors: Li, H., Yu, L.-J., Liu, X., Shen, J.-R., Wang, J.
PDB entry 7dzg: Intermediate of FABP with a delay time of 30 ns
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-25
Authors: Li, H., Yu, L.-J., Liu, X., Shen, J.-R., Wang, J.
PDB entry 7dzh: intermediate of FABP with a delay time of 100 ns
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-01-25
Authors: Li, H., Yu, L.-J., Liu, X., Shen, J.-R., Wang, J.
PDB entry 7dzi: intermediate of FABP with a delay time of 300 ns
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-01-25
Authors: Li, H., Yu, L.-J., Liu, X., Shen, J.-R., Wang, J.
PDB entry 7dzj: Fabp protein before hv
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2021-01-25
Authors: Li, H., Yu, L.-J., Liu, X., Shen, J.-R., Wang, J.
PDB entry 7dzk: Fabp protein after hv
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2021-01-25
Authors: Li, H., Yu, L.-J., Liu, X., Shen, J.-R., Wang, J.
PDB entry 7dzl: A69C-M71L mutant of Fabp protein
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2021-01-25
Authors: Li, H., Yu, L.-J., Liu, X., Shen, J.-R., Wang, J.
PDB entry 7dzm: Crystal Structure of the cross-restricted T18A TCR and HLAB8101 bound to HIV-1 Gag TL9 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-01-25
Authors: Liu, Y., Yin, L.
PDB entry 7dzn: Crystal Structure of the cross-restricted T18A TCR and HLAB4201 bound to HIV-1 Gag TL9 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2021-01-25
Authors: Liu, Y., Yin, L.
PDB entry 7dzt: Cyrstal structure of PETase from Rhizobacter gummiphilus
Classification: HYDROLASE
Source organism: Rhizobacter gummiphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-01-26
Authors: Sagong, H.-Y., Kim, K.-J.
PDB entry 7dzu: Cyrstal structure of PETase K169A mutant from Rhizobacter gummiphilus
Classification: HYDROLASE
Source organism: Rhizobacter gummiphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-01-26
Authors: Sagong, H.-Y., Kim, K.-J.
PDB entry 7dzv: Cyrstal structure of PETase E186A mutant from Rhizobacter gummiphilus
Classification: HYDROLASE
Source organism: Rhizobacter gummiphilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-26
Authors: Sagong, H.-Y., Kim, K.-J.
PDB entry 7dzw: Apo spike protein from SARS-CoV2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2021-01-26
Authors: Liu, Y., Soh, W.T., Li, S., Kishikawa, J., Hirose, M., Kato, T., Standley, D., Okada, M., Arase, H.
PDB entry 7dzx: Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 8D2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2021-01-26
Authors: Liu, Y., Soh, W.T., Li, S., Kishikawa, J., Hirose, M., Kato, T., Standley, D., Okada, M., Arase, H.
PDB entry 7dzy: Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 2490
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-01-26
Authors: Liu, Y., Soh, W.T., Li, S., Kishikawa, J., Hirose, M., Kato, T., Standley, D., Okada, M., Arase, H.
PDB entry 7dzz: Trans-3/4-proline-hydroxylase H11-stateV
Classification: HYDROLASE
Source organism: uncultured bacterium esnapd13
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-01-26
Authors: Gong, W.G., Yang, L.Y.
PDB entry 7e00: Trans-proline-hydroxylase H11 with Succinic and L-proline in the fourth reaction state.
Classification: HYDROLASE
Source organism: uncultured bacterium esnapd13
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-01-26
Authors: Gong, W.G., Yang, L.Y.
PDB entry 7e01: Trans-3/4-proline-hydroxylase H11 in the sixth reaction state
Classification: HYDROLASE
Source organism: uncultured bacterium esnapd13
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2021-01-26
Authors: Gong, W.G., Yang, L.Y.
PDB entry 7e02: Room temperature structure of lysozyme delivered in beef tallow by serial millisecond crystallography
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-01-26
Authors: Nam, K.H.
PDB entry 7e03: Room temperature structure of glucose isomerase delivered in beef tallow by serial millisecond crystallography
Classification: ISOMERASE
Source organism: Streptomyces rubiginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-26
Authors: Nam, K.H.
PDB entry 7e04: Crystal structure of Bomgl, a monoacylglycerol lipase from marine Bacillus sp.
Classification: HYDROLASE
Source organism: Cytobacillus oceanisediminis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-01-27
Authors: Wang, Y.H., Wang, J., Lan, D.M.
PDB entry 7e05: Trans-3/4-proline-hydroxylase H11 apo structure
Classification: HYDROLASE
Source organism: uncultured bacterium esnapd13
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2021-01-27
Authors: Gong, W.G., Yang, L.Y.
PDB entry 7e06: Trans-3/4-proline-hydroxylase H11 with AKG
Classification: HYDROLASE
Source organism: uncultured bacterium esnapd13
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2021-01-27
Authors: Gong, W.G., Yang, L.Y.
PDB entry 7e07: Trans-3/4-proline-hydroxylase H11 with AKG and L-proline
Classification: HYDROLASE
Source organism: uncultured bacterium esnapd13
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2021-01-27
Authors: Gong, W.G., Yang, L.Y.
PDB entry 7e08: Trans-3/4-proline-hydroxylase H11 with 4-Hydroxyl-proline
Classification: HYDROLASE
Source organism: uncultured bacterium esnapd13
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2021-01-27
Authors: Gong, W.G., Yang, L.Y.
PDB entry 7e09: Trans-3/4-proline-hydroxylase H11 with 3-hydroxyl-proline
Classification: HYDROLASE
Source organism: uncultured bacterium esnapd13
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2021-01-27
Authors: Gong, W.G., Yang, L.Y.
PDB entry 7e0a: X-ray structure of human PPARgamma ligand binding domain-saroglitazar co-crystals obtained by co-crystallization
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.771 Å
Deposited: 2021-01-27
Authors: Kamata, S., Honda, A., Uchii, K., Machida, Y., Oyama, T., Ishii, I.
PDB entry 7e0b: The crystal structure of sorting nexin 27 and PBM complex
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2021-01-27
Authors: Shang, G.J., Qi, J.X.
PDB entry 7e0c: Structure of L-glutamate oxidase R305E mutant
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. X-119-6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2021-01-27
Authors: Ito, N., Matsuo, S., Inagaki, K., Imada, K.
PDB entry 7e0d: Structure of L-glutamate oxidase R305E mutant in complex with L-arginine
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. X-119-6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-01-27
Authors: Ito, N., Matsuo, S., Inagaki, K., Imada, K.
PDB entry 7e0e: Crystal structure of mouse interferon alpha2 at 2.1 angstrom resolution
Classification: CYTOKINE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2021-01-27
Authors: Watanabe, H., Yabe-Wada, T., Unno, M.
PDB entry 7e0f: CryoEM structure of G51D alpha-synuclein amyloid fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2021-01-27
Authors: Sun, Y.P., Long, H.F., Xia, W.C., Liu, C.
PDB entry 7e0g: Crystal structure of Lysine Specific Demethylase 1 (LSD1) with TAK-418, FAD-adduct
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-01-28
Authors: Oki, H.
PDB entry 7e0h: LHCII-1 in the state transition supercomplex PSI-LHCI-LHCII from the LhcbM1 lacking mutant of Chlamydomonas reinhardtii
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2021-01-28
Authors: Pan, X.W., Li, A.J., Liu, Z.F., Li, M.
PDB entry 7e0i: LHCII-2 in the state transition supercomplex PSI-LHCI-LHCII from the LhcbM1 lacking mutant of Chlamydomonas reinhardti
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.53 Å
Deposited: 2021-01-28
Authors: Pan, X.W., Li, A.J., Liu, Z.F., Li, M.
PDB entry 7e0j: LHCII-1 in the state transition supercomplex PSI-LHCI-LHCII from the double phosphatase mutant pph1;pbcp of Chlamydomonas reinhardti.
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2021-01-28
Authors: Pan, X.W., Li, A.J., Liu, Z.F., Li, M.
PDB entry 7e0k: LHCII-2 in the state transition supercomplex PSI-LHCI-LHCII from the double phosphatase mutant pph1;pbcp of Chlamydomonas reinhardti.
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2021-01-28
Authors: Pan, X.W., Li, A.J., Liu, Z.F., Li, M.
PDB entry 7e0l: Class III hybrid cluster protein (HCP) from Methanothermobacter marburgensis
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis str. Marburg
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2021-01-28
Authors: Fujishiro, T.
PDB entry 7e0m: Crystal structure of phospholipase D
Classification: HYDROLASE
Source organism: Serratia plymuthica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2021-01-28
Authors: Wang, F.H.
PDB entry 7e0n: Crystal structure of Monoacylglycerol Lipase chimera
Classification: HYDROLASE
Source organism: Bacillus oceanisediminis 2691; Geobacillus sp. 12AMOR1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-01-28
Authors: Lan, D.M.
PDB entry 7e0o: Crystal Structure of Human Indoleamine 2,3-dioxygenagse 1 (hIDO1) Complexed with 6-Bromo-1H-indazol-4-amine (1)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.337 Å
Deposited: 2021-01-28
Authors: Li, G.-B., Ning, X.-L.
PDB entry 7e0p: Crystal Structure of Human Indoleamine 2,3-dioxygenagse 1 (hIDO1) Complexed with 4-(((6-Bromo-1H-indazol-4-yl)amino)methyl)phenol (2)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.635 Å
Deposited: 2021-01-28
Authors: Li, G.-B., Ning, X.-L.
PDB entry 7e0q: Crystal Structure of Human Indoleamine 2,3-dioxygenagse 1 (hIDO1) Complexed with (1S,2R)-2-(((6-Bromo-1H-indazol-4-yl)amino)methyl)cyclohexan-1-ol (22)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.462 Å
Deposited: 2021-01-28
Authors: Li, G.-B., Ning, X.-L.
PDB entry 7e0s: Crystal Structure of Human Indoleamine 2,3-dioxygenagse 1 (hIDO1) Complexed with (1R,2S)-2-(((6-Bromo-1H-indazol-4-yl)amino)methyl)cyclohexan-1-ol (23)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.712 Å
Deposited: 2021-01-28
Authors: Li, G.-B., Ning, X.-L.
PDB entry 7e0t: Crystal Structure of Human Indoleamine 2,3-dioxygenagse 1 (hIDO1) Complexed with (1R,2S)-2-(((5-bromo-1H-indazol-4-yl)amino)methyl)Cyclohexan-1-ol (36)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.137 Å
Deposited: 2021-01-28
Authors: Li, G.-B., Ning, X.-L.
PDB entry 7e0u: Crystal Structure of Human Indoleamine 2,3-dioxygenagse 1 (hIDO1) Complexed with 6-Bromo-N-(((1S,2S)-2-chlorocyclohexyl)methyl)-1H-indazol-4-amine (39)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.278 Å
Deposited: 2021-01-28
Authors: Li, G.-B., Ning, X.-L.
PDB entry 7e0v: GDPD from Pyrococcus furiosus DSM 3638
Classification: HYDROLASE
Source organism: Pyrococcus furiosus DSM 3638
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-01-28
Authors: Wang, Y.H., Wang, J., Wang, F.H.
PDB entry 7e0w: Crystal Structure of BCH domain from S. pombe
Classification: LIPID BINDING PROTEIN
Source organism: Schizosaccharomyces pombe 972h-
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-01-28
Authors: Chichili, V.P.R., Jobichen, C., Sivaraman, J.
PDB entry 7e0x: Crystal structure of Arabidopsis thaliana HPPD complexed with 4-hydroxyphenylacetic acid
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.887 Å
Deposited: 2021-01-28
Authors: Lin, H.Y., Yang, G.F.
PDB entry 7e0z: Crystal structure of PKAc-PLN complex
Classification: TRANSFERASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.162 Å
Deposited: 2021-01-28
Authors: Qin, J., Yuchi, Z.
PDB entry 7e11: Crystal structure of PKAc-PLN R9C complex
Classification: TRANSFERASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.43 Å
Deposited: 2021-01-28
Authors: Qin, J., Lin, L., Yuchi, Z.
PDB entry 7e12: Crystal structure of PKAc-A11E complex
Classification: TRANSFERASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.796 Å
Deposited: 2021-01-28
Authors: Qin, J., Lin, L., Yuchi, Z.
PDB entry 7e13: Caprylic acid targets a serine hydroxymethyltransferase to kill horseweed
Classification: PLANT PROTEIN
Source organism: Erigeron canadensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2021-01-29
Authors: Bai, L.Y., Li, Z.R.
PDB entry 7e14: Compound2_GLP-1R_OWL833_Gs complex structure
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-01-30
Authors: Cong, Z.T., Chen, L.N., Ma, H.L., Yang, D.H., Xu, H.E., Zhang, Y., Wang, M.W.
PDB entry 7e15: Protein ternary complex working for DNA replication initiation
Classification: DNA BINDING PROTEIN/REPLICATION
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-01-30
Authors: Oyama, T., Ishino, Y.
PDB entry 7e16: crystal structure of GDSL esterase from Geobacillus thermodenitrificans
Classification: HYDROLASE
Source organism: Geobacillus thermodenitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2021-01-31
Authors: Chen, L.
PDB entry 7e17: Structure of dimeric uPAR
Classification: CELL INVASION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2021-02-01
Authors: Cai, Y., Huang, M.
PDB entry 7e18: Crystal structure of SAR-CoV-2 3CL protease complex with inhibitor YH-53
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-02-01
Authors: Senda, M., Konno, S., Hayashi, Y., Senda, T.
PDB entry 7e19: Crystal structure of SAR-CoV-2 3CL protease complex with inhibitor SH-5
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-02-01
Authors: Senda, M., Konno, S., Hayashi, Y., Senda, T.
PDB entry 7e1a: Human bile salt exporter ABCB11 in complex with taurocholate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2021-02-01
Authors: Wang, L., How, W.T., Chen, Y.
PDB entry 7e1b: Crystal structure of VbrR-DNA complex
Classification: DNA BINDING PROTEIN
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.587 Å
Deposited: 2021-02-01
Authors: Hong, S., Zhang, X., Zhang, P.
PDB entry 7e1c: Structure of MreB3 from Spiroplasma eriocheiris
Classification: STRUCTURAL PROTEIN
Source organism: Spiroplasma eriocheiris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-02-01
Authors: Takahashi, D., Miyata, M., Imada, K.
PDB entry 7e1d: Se-DBD
Classification: DNA BINDING PROTEIN
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2021-02-01
Authors: Hong, S., Zhang, P.
PDB entry 7e1e: Lamprey serum virus-like lectin-LSVL
Classification: SUGAR BINDING PROTEIN
Source organism: Lethenteron camtschaticum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2021-02-01
Authors: Peng, Y.
PDB entry 7e1f: Native-DBD
Classification: DNA BINDING PROTEIN
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.447 Å
Deposited: 2021-02-01
Authors: Hong, S., Zhang, P.
PDB entry 7e1g: Structure of MreB3 from Spiroplasma eriocheiris
Classification: STRUCTURAL PROTEIN
Source organism: Spiroplasma eriocheiris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-02-01
Authors: Takahashi, D., Miyata, M., Imada, K.
PDB entry 7e1h: crystal structure of RD-BEF
Classification: SIGNALING PROTEIN
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.805 Å
Deposited: 2021-02-01
Authors: Hong, S., Zhang, X., Zhang, P.
PDB entry 7e1i: Crystal structure of Pr55Gag-matrix domain in complex with IP6 at ambient temperature in space group P1
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.301 Å
Deposited: 2021-02-01
Authors: DeMirci, H., Destan, E.
PDB entry 7e1j: Crystal structure of Pr55Gag-matrix domain in complex with IP6 in space group C121
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2021-02-01
Authors: DeMirci, H., Senda, T., Destan, E.
PDB entry 7e1k: Crystal structure of Pr55Gag-matrix domain in complex with IP6 in space group R32
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-02-01
Authors: DeMirci, H., Senda, T., Destan, E.
PDB entry 7e1l: Crystal structure of apo form PhlH
Classification: TRANSCRIPTION
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-02-01
Authors: Zhang, N., Wu, J., He, Y.X., Ge, H.
PDB entry 7e1n: Crystal structure of PhlH in complex with 2,4-diacetylphloroglucinol
Classification: TRANSCRIPTION
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-02
Authors: Zhang, N., Wu, J., He, Y.X., Ge, H.
PDB entry 7e1p: Crystal structure of Sulfurisphaera tokodaii O6-methylguanine methyltransferase C120S variant in complex with O6-methyldeoxyguanosine
Classification: TRANSFERASE
Source organism: Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2021-02-03
Authors: Kikuchi, M., Yamauchi, T., Iizuka, Y., Tsunoda, M.
PDB entry 7e1q: Crystal structure of dehydrogenase/isomerase FabX from Helicobacter pylori
Classification: FLAVOPROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-02-03
Authors: Zhou, J.S., Zhang, L., Zhang, L.
PDB entry 7e1r: Crystal structure of Dehydrogenase/isomerase FabX from Helicobacter pylori in complex with holo-ACP
Classification: FLAVOPROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.795 Å
Deposited: 2021-02-03
Authors: Zhou, J.S., Zhang, L., Zhang, L.
PDB entry 7e1s: Crystal structure of dehydrogenase/isomerase FabX from Helicobacter pylori in complex with octanoyl-ACP
Classification: FLAVOPROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2021-02-03
Authors: Zhou, J.S., Zhang, L., Zhang, L.
PDB entry 7e1t: Crystal structure of Rab9A-GTP-Nde1
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-02-03
Authors: Zhang, Y., Zhang, T., Ding, J.
PDB entry 7e1v: Cryo-EM structure of apo hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium smegmatis MC2 51; Mycobacterium tuberculosis H37Rv; Mycolicibacterium smegmatis MC2 51
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2021-02-03
Authors: Zhou, S., Wang, W., Gao, Y., Gong, H., Rao, Z.