LiteFold/PDB huggingface dataset:
PDB entry 4yfj: Crystal structure of aminoglycoside acetyltransferase AAC(3)-Ib
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-02-25
Authors: Stogios, P.J., Xu, Z., Evdokimova, E., Yim, V., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4yfk: Escherichia coli RNA polymerase in complex with squaramide compound 8.
Classification: transcription/transcription inhibitor
Source organism: Escherichia coli (strain K12); Escherichia coli O139:H28 (strain E24377A / ETEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.571 Å
Deposited: 2015-02-25
Authors: Molodtsov, V., Fleming, P.R., Eyermann, C.J., Ferguson, A.D., Foulk, M.A., McKinney, D.C., Masse, C.E., Buurman, E.T., Murakami, K.S.
PDB entry 4yfl: Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 1B2530 in complex with HIV-1 clade A/E 93TH057 gp120
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.387 Å
Deposited: 2015-02-25
Authors: Acharya, P., Zhou, T., Moquin, S., Kwong, P.D.
PDB entry 4yfm: Class A beta-lactamase from Mycobacterium abscessus
Classification: HYDROLASE
Source organism: Mycobacterium abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2015-02-25
Authors: Soroka, D., Li de la Sierra-Gallay, I., Dubee, V., van Tilbeurgh, H., Arthur, M.
PDB entry 4yfn: Escherichia coli RNA polymerase in complex with squaramide compound 14 (N-[3,4-dioxo-2-(4-{[4-(trifluoromethyl)benzyl]amino}piperidin-1-yl)cyclobut-1-en-1-yl]-3,5-dimethyl-1,2-oxazole-4-sulfonamide)
Classification: transcription/transcription inhibitor
Source organism: Escherichia coli (strain K12); Escherichia coli O139:H28 (strain E24377A / ETEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.817 Å
Deposited: 2015-02-25
Authors: Molodtsov, V., Fleming, P.R., Eyermann, C.J., Ferguson, A.D., Foulk, M.A., McKinney, D.C., Masse, C.E., Buurman, E.T., Murakami, K.S.
PDB entry 4yfo: beta1_ex1
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.39 Å
Deposited: 2015-02-25
Authors: Murray, J.W., MacDonald, J.T.
PDB entry 4yfp: CRYSTAL STRUCTURE OF THE R111K:Y134F:T54V:R132Q:P39Y:R59Y MUTANT OF HUMAN CELLULAR RETINOIC ACID BINDING PROTEIN II WITH RETINAL AFTER 20 MINUTES INCUBATION AT 1.95 ANGSTROM RESOLUTION-Kinetic Product
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.951 Å
Deposited: 2015-02-25
Authors: Nosrati, M., Geiger, J.H.
PDB entry 4yfq: CRYSTAL STRUCTURE OF THE R111K:Y134F:T54V:R132Q:P39Y:R59Y MUTANT OF HUMAN CELLULAR RETINOIC ACID BINDING PROTEINII WITH RETINAL AFTER 24 HOURS INCUBATION AT 1.62 ANGSTROM RESOLUTION - Thermodynamic product - 1st cycle
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2015-02-25
Authors: Nosrati, M., Geiger, J.H.
PDB entry 4yfr: Crystal structure of the R111K:Y134F:T54V:R132Q:P39Y:R59Y mutant of human Cellular Retinoic Acid Binding Protein II with Retinal at 1.95 Angstrom Resolution - UV irradiated crystal for 30 minutes - 1st Cycle
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.952 Å
Deposited: 2015-02-25
Authors: Nosrati, M., Geiger, J.H.
PDB entry 4yfs: Structure of the synthetic Duffy Binding Protein (DBP) antigen DEKnull relevant for malaria vaccine design
Classification: Erythrocyte binding protein
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-02-25
Authors: Chen, E., Tolia, N.H.
PDB entry 4yft: HUab-20bp
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.914 Å
Deposited: 2015-02-25
Authors: Hammel, M., Reyes, F.E., Parpana, R., Tainer, J.A., Adhya, S., Amlanjyoti, D.
PDB entry 4yfu: Crystal structure of open Bacillus fragment DNA polymerase bound to DNA and dTTP
Classification: Transferase/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-02-25
Authors: Wu, E.Y.
PDB entry 4yfv: X-ray structure of the 4-N-formyltransferase VioF from Providencia alcalifaciens O30
Classification: TRANSFERASE
Source organism: Providencia alcalifaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2015-02-25
Authors: Genthe, N.A., Thoden, J.B., Benning, M.M., Holden, H.M.
PDB entry 4yfw: Structural basis of glycan recognition in neonate-specific rotaviruses
Classification: VIRAL PROTEIN
Source organism: Rotavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2015-02-25
Authors: Hu, L., Prasad, B.V.V.
PDB entry 4yfx: Escherichia coli RNA polymerase in complex with Myxopyronin B
Classification: transcription/transcription inhibitor
Source organism: Escherichia coli (strain K12); Escherichia coli O139:H28 (strain E24377A / ETEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.844 Å
Deposited: 2015-02-25
Authors: Molodtsov, V., Fleming, P.R., Eyermann, C.J., Ferguson, A.D., Foulk, M.A., McKinney, D.C., Masse, C.E., Buurman, E.T., Murakami, K.S.
PDB entry 4yfy: X-ray structure of the Viof N-formyltransferase from Providencia alcalifaciens O30 in complex with THF and TDP-Qui4N
Classification: TRANSFERASE
Source organism: Providencia alcalifaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-02-25
Authors: Genthe, N.A., Thoden, J.B., Benning, M.M., Holden, H.M.
PDB entry 4yfz: Structural basis of glycan recognition in neonate-specific rotaviruses
Classification: VIRAL PROTEIN
Source organism: Human rotavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-02-25
Authors: Hu, L., Prasad, B.V.V.
PDB entry 4yg0: Structural basis of glycan recognition in neonate-specific rotaviruses
Classification: VIRAL PROTEIN
Source organism: Human rotavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.285 Å
Deposited: 2015-02-25
Authors: Hu, L., Prasad, B.V.V.
PDB entry 4yg1: HipB-O1-O2 complex/P21212 crystal form
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2015-02-25
Authors: Schumacher, M.A.
PDB entry 4yg2: X-ray crystal structur of Escherichia coli RNA polymerase sigma70 holoenzyme
Classification: TRANSFERASE/TRANSCRIPTION
Source organism: Escherichia coli K12; Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2015-02-25
Authors: Murakami, K.S.
PDB entry 4yg3: Structural basis of glycan recognition in neonate-specific rotaviruses
Classification: VIRAL PROTEIN
Source organism: Rotavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.285 Å
Deposited: 2015-02-25
Authors: Hu, L., Prasad, B.V.V.
PDB entry 4yg4: HipB-O1-O1* complex
Classification: TRANSCRIPTION/DNA
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2015-02-25
Authors: Schumacher, M.A.
PDB entry 4yg6: Structural basis of glycan recognition in neonate-specific rotaviruses
Classification: VIRAL PROTEIN
Source organism: Rotavirus A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2015-02-25
Authors: Hu, L., Prasad, B.V.V.
PDB entry 4yg7: Structure of FL autorepression promoter complex
Classification: TRANSCRIPTION, TRANSFERASE/DNA
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.77 Å
Deposited: 2015-02-25
Authors: Schumacher, M.A.
PDB entry 4yg8: CRYSTAL STRUCTURE OF THE CHS5-CHS6 EXOMER CARGO ADAPTOR COMPLEX
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2015-02-26
Authors: Paczkowski, J.E., Richardson, B.C., Strassner, A.M., Fromme, J.C.
PDB entry 4yga: CDPK1, from Toxoplasma gondii, bound to inhibitory VHH-1B7
Classification: METAL BINDING PROTEIN
Source organism: Toxoplasma gondii; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2015-02-26
Authors: Knockenhauer, K.E., Schwartz, T.U.
PDB entry 4ygb: Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-free form
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-02-26
Authors: Satoh, T., Nishio, M., Yagi-Utsumi, M., Suzuki, K., Anzai, T., Mizushima, T., Kamiya, Y., Kato, K.
PDB entry 4ygc: Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-bound form 1
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-02-26
Authors: Satoh, T., Nishio, M., Yagi-Utsumi, M., Suzuki, K., Anzai, T., Mizushima, T., Kamiya, Y., Kato, K.
PDB entry 4ygd: Crystal structure of ERGIC-53/MCFD2, monoclinic calcium-bound form 2
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2015-02-26
Authors: Satoh, T., Nishio, M., Yagi-Utsumi, M., Suzuki, K., Anzai, T., Mizushima, T., Kamiya, Y., Kato, K.
PDB entry 4yge: Crystal structure of ERGIC-53/MCFD2, trigonal calcium-bound form 2
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2015-02-26
Authors: Satoh, T., Nishio, M., Yagi-Utsumi, M., Suzuki, K., Anzai, T., Mizushima, T., Kamiya, Y., Kato, K.
PDB entry 4ygf: Crystal structure of the complex of Helicobacter pylori alpha-Carbonic Anhydrase with acetazolamide
Classification: LYASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-02-26
Authors: Roujeinikova, A., Modak, J.K.
PDB entry 4ygg: CRYSTAL STRUCTURE OF R111K:Y134F:T54V:R132Q:P39Y:R59Y MUTANT OF HUMAN CELLULAR RETINOIC ACID BINDING PROTEIN II WITH RETINAL AT 1.9 ANGSTROM RESOLUTION - VISIBLE LIGHT IRRADIATED CRYSTAL - 2ND CYCLE
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-02-26
Authors: Nosrati, M., Geiger, J.H.
PDB entry 4ygh: Crystal Structure of R111K:Y134F:T54V:R132Q:P39Y:R59Y mutant of human Cellular Retinoic Acid Binding Protein II with Retinal at 2.1 Angstrom resolution - UV irradiated crystal - 2nd cycle
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-02-26
Authors: Nosrati, M., Geiger, J.H.
PDB entry 4ygi: Crystal Structure of SUVH5 SRA bound to fully hydroxymethylated CG DNA
Classification: TRANSFERASE/DNA
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-02-26
Authors: Rajakumara, E.
PDB entry 4ygj: NaBr--Interactions between Hofmeister Anions and the Binding Pocket of a Protein
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2015-02-26
Authors: Fox, J.M., Kang, K., Sherman, W., Heroux, A., Sastry, G.M., Baghbanzadeh, M., Lockett, M.R., Whitesides, G.M.
PDB entry 4ygk: NaSCN--Interactions between Hofmeister Anions and the Binding Pocket of a Protein
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-02-26
Authors: Fox, J.M., Kang, K., Sherman, W., Heroux, A., Sastry, G.M., Baghbanzadeh, M., Lockett, M.R., Whitesides, G.M.
PDB entry 4ygl: NaClO4--Interactions between Hofmeister Anions and the Binding Pocket of a Protein
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2015-02-26
Authors: Fox, J.M., Kang, K., Sherman, W., Heroux, A., Sastry, G.M., Baghbanzadeh, M., Lockett, M.R., Whitesides, G.M.
PDB entry 4ygm: Vaccinia virus his-D4/A20(1-50) in complex with uracil
Classification: HYDROLASE
Source organism: Vaccinia virus (strain Copenhagen)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-02-26
Authors: Tarbouriech, N., Iseni, F., Burmeister, W.P.
PDB entry 4ygn: NaI--Interactions between Hofmeister Anions and the Binding Pocket of a Protein
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.23 Å
Deposited: 2015-02-26
Authors: Fox, J.M., Kang, K., Sherman, W., Heroux, A., Sastry, G.M., Baghbanzadeh, M., Lockett, M.R., Whitesides, G.M.
PDB entry 4ygo: Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae in intermediate state
Classification: TRANSFERASE
Source organism: Vibrio cholerae serotype O1 (ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-02-26
Authors: Filippova, E.V., Minasov, G., Kiryukhina, O., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4ygq: Crystal structure of HAD phosphatase from Thermococcus onnurineus
Classification: HYDROLASE
Source organism: Thermococcus onnurineus (strain NA1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-02-26
Authors: Ngo, T.D., Le, B.V., Subramani, V.K., Nguyen, C.M.T., Lee, H.S., Cho, Y., Kim, K.K., Hwang, H.Y.
PDB entry 4ygr: Crystal structure of HAD phosphatase from Thermococcus onnurineus
Classification: HYDROLASE
Source organism: Thermococcus onnurineus (strain NA1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.703 Å
Deposited: 2015-02-26
Authors: Ngo, T.D., Le, B.V., Subramani, V.K., Nguyen, C.M.T., Lee, H.S., Cho, Y., Kim, K.K., Hwang, H.Y.
PDB entry 4ygs: Crystal structure of HAD phosphatase from Thermococcus onnurineus
Classification: HYDROLASE
Source organism: Thermococcus onnurineus (strain NA1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-02-26
Authors: Ngo, T.D., Le, B.V., Subramani, V.K., Nguyen, C.M.T., Lee, H.S., Cho, Y., Kim, K.K., Hwang, H.Y.
PDB entry 4ygt: Crystal structure of a DUF4309 family protein (YjgB) from Bacillus subtilis subsp. subtilis str. 168 at 2.13 A resolution
Classification: STRUCTURAL GENOMICS  UNKNOWN FUNCTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2015-02-26
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4ygu: Crystal structure of a putative adhesin (BACEGG_01763) from Bacteroides eggerthii DSM 20697 at 2.20 A resolution
Classification: CELL ADHESION
Source organism: Bacteroides eggerthii DSM 20697
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-02-26
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4ygv: Reversal Agent for Dabigatran
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2015-02-26
Authors: Schiele, F., Nar, H.
PDB entry 4ygw: RNase S in complex with stabilized S peptide
Classification: HYDROLASE
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2015-02-26
Authors: Assem, N., Ferreira, D., Wolan, D.W., Dawson, P.E.
PDB entry 4ygx: Crystal Structure of D. melanogaster Ssu72+Symplekin bound to cis peptidomimetic CTD phospho-Ser5 peptide
Classification: HYDROLASE
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2015-02-26
Authors: Mayfield, J.E., Zhang, Y.
PDB entry 4ygy: Crystal Structure of Human Scp1 bound to trans-proline peptidomimetic CTD phospho-Ser5 peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2015-02-26
Authors: Mayfield, J.E., Zhang, Y.
PDB entry 4ygz: CRYSTAL STRUCTURE OF THE R111K:Y134F:T54V:R132Q:P39Y:R59Y MUTANT OF HUMAN CELLULAR RETINOIC ACID BINDING PROTEIN II WITH RETINAL AT 2.06 ANGSTROM RESOLUTION - VISIBLE LIGHT IRRADIATED CRYSTAL -3RD CYCLE
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2015-02-26
Authors: Nosrati, M., Geiger, J.H.
PDB entry 4yh0: Crystal structure of the R111K:Y134F:T54V:R132Q:P39Y:R59Y mutant of human Cellular Retinoic Acid Binding Protein II in complex with Retinal at 2.14 angstrom resolution - UV irradiated crystal - 3rd cycle
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.144 Å
Deposited: 2015-02-26
Authors: Nosrati, M., Geiger, J.H.
PDB entry 4yh1: Structure of Human Scp1 bound to cis-proline peptidomimetic CTD phospho-Ser5 peptide
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-02-26
Authors: Mayfield, J.E., Zhang, Y.
PDB entry 4yh2: Glutathione Transferase E6 from Drosophila melanogaster
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2015-02-26
Authors: Wongsantichon, J., Robinson, R.C., Ketterman, A.J.
PDB entry 4yh3: Crystal structure of human BRD4(1) in complex with 4-[(2E)-3-(4-methoxyphenyl)-2-phenylprop-2-enoyl]-3,4-dihydroquinoxalin-2(1H)-one (compound 19a)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-02-26
Authors: White, A., Lakshminarasimhan, D., Suto, R.K.
PDB entry 4yh4: Crystal structure of human BRD4(1) in complex with 4-[(5-phenylpyridin-3-yl)carbonyl]-3,4-dihydroquinoxalin-2(1H)-one (compound 19d)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2015-02-26
Authors: Lakshminarasimhan, D., White, A., Suto, R.K.
PDB entry 4yh5: Lipomyces starkeyi levoglucosan kinase bound to ADP and Manganese
Classification: TRANSFERASE
Source organism: Lipomyces starkeyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-02-26
Authors: Bacik, J.P.
PDB entry 4yh6: Crystal structure of IL1RAPL1 ectodomain
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-02-27
Authors: Yamagata, A., Fukai, S.
PDB entry 4yh7: Crystal structure of PTPdelta ectodomain in complex with IL1RAPL1
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.4 Å
Deposited: 2015-02-27
Authors: Yamagata, A., Fukai, S.
PDB entry 4yh8: Structure of yeast U2AF complex
Classification: SPLICING
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-02-27
Authors: Yoshida, H., Park, S.Y., Urano, T., Obayashi, E.
PDB entry 4yha: Crystal structure of the complex of Helicobacter pylori alpha-Carbonic Anhydrase with methazolamide
Classification: LYASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-02-27
Authors: Roujeinikova, A., Modak, J.K.
PDB entry 4yhb: Crystal structure of a siderophore utilization protein from T. fusca
Classification: OXIDOREDUCTASE
Source organism: Thermobifida fusca TM51
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8892 Å
Deposited: 2015-02-27
Authors: Li, K., Bruner, S.D.
PDB entry 4yhc: Crystal structure of the WD40 domain of SCAP from fission yeast
Classification: STRUCTURAL PROTEIN
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-02-27
Authors: Gong, X., Li, J.X., Wu, J.P., Yan, C.Y., Yan, N.
PDB entry 4yhd: Staphylococcal alpha-hemolysin H35A mutant monomer
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.801 Å
Deposited: 2015-02-27
Authors: Sugawara, T., Kato, K., Tanaka, Y., Yao, M.
PDB entry 4yhe: NATIVE BACTEROIDETES-AFFILIATED GH5 CELLULASE LINKED WITH A POLYSACCHARIDE UTILIZATION LOCUS
Classification: HYDROLASE
Source organism: Bacteroidetes bacterium AC2a
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-02-27
Authors: Naas, A.E., MacKenzie, A.K., Dalhus, B., Eijsink, V.G.H., Pope, P.B.
PDB entry 4yhf: Bruton's tyrosine kinase in complex with a t-butyl cyanoacrylamide inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-02-27
Authors: Paavilainen, V.O., McFarland, J.M., Taunton, J.
PDB entry 4yhg: NATIVE BACTEROIDETES-AFFILIATED GH5 CELLULASE LINKED WITH A POLYSACCHARIDE UTILIZATION LOCUS
Classification: HYDROLASE
Source organism: Bacteroidetes bacterium AC2a
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-02-27
Authors: Naas, A.E., MacKenzie, A.K., Dalhus, B., Eijsink, V.G.H., Pope, P.B.
PDB entry 4yhh: Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with tigecycline
Classification: RIBOSOME
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 3.417 Å
Deposited: 2015-02-27
Authors: Schedlbauer, A., Kaminishi, T., Ochoa-Lizarralde, B., Dhimole, N., Zhou, S., Lopez-Alonso, J.P., Connell, S.R., Fucini, P.
PDB entry 4yhi: Reversal Agent for Dabigatran
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-02-27
Authors: Schiele, F., Nar, H.
PDB entry 4yhj: Structure and Function of the Hypertension Variant A486V of G Protein-coupled Receptor Kinase 4 (GRK4)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-02-27
Authors: Allen, S.J., Parthasarathy, G., Soisson, S., Munshi, S.
PDB entry 4yhk: Reversal Agent for Dabigatran
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2015-02-27
Authors: Schiele, F., Nar, H.
PDB entry 4yhl: Reversal Agent for Dabigatran
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2015-02-27
Authors: Schiele, F., Nar, H.
PDB entry 4yhm: Reversal Agent for Dabigatran
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2015-02-27
Authors: Schiele, F., Nar, H.
PDB entry 4yhn: Dabigatran Reversal Agent
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2015-02-27
Authors: Schiele, F., Nar, H.
PDB entry 4yho: Reversal Agent for Dabigatran
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2015-02-27
Authors: Schiele, F., Nar, H.
PDB entry 4yhp: Crystal structure of 309M3-B Fab in complex with H3K9me3 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2015-02-27
Authors: Hattori, T., Dementieva, I.S., Montano, S.P., Koide, S.
PDB entry 4yhq: Crystal structure of multidrug resistant clinical isolate PR20 with GRL-5010A
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2015-02-27
Authors: Agniswamy, J., Weber, I.T.
PDB entry 4yhr: Crystal Structure of Yeast Proliferating Cell Nuclear Antigen
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9502 Å
Deposited: 2015-02-27
Authors: Litman, J.M., Nguyen, V.Q., Kondratick, C.M., Powers, K.T., Schnieders, M.J., Washington, M.T.
PDB entry 4yhs: CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM BRADYRHIZOBIUM sp. BTAi1 (BBta_2440, TARGET EFI-511490) WITH BOUND BIS-TRIS
Classification: SOLUTE-BINDING PROTEIN
Source organism: Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-02-27
Authors: Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Koss, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4yht: bRaf complexed with an inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2015-02-27
Authors: Shewchuk, L.M., Lawhorn, B.G.
PDB entry 4yhu: Yeast Prp3 C-terminal fragment 296-469
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-02-27
Authors: Liu, S., Wahl, M.C.
PDB entry 4yhv: Yeast Prp3 C-terminal fragment 325-469
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-02-27
Authors: Liu, S., Wahl, M.C.
PDB entry 4yhw: Yeast Prp3 (296-469) in complex with fragment of U4/U6 di-snRNA
Classification: SPLICING
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2015-02-27
Authors: Liu, S., Wahl, M.C.
PDB entry 4yhx: Crystal Structure of LAGLIDADG Meganuclease I-GpeMI Bound to Uncleaved DNA
Classification: hydrolase/dna
Source organism: Grosmannia penicillata; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-02-27
Authors: Hallinan, J.P., Kaiser, B.K., Stoddard, B.L.
PDB entry 4yhy: Crystal structure of 309M3-B in complex with trimethylated Lys
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-02-27
Authors: Hattori, T., Dementieva, I.S., Montano, S.P., Koide, S.
PDB entry 4yhz: Crystal structure of 304M3-B Fab in complex with H3K4me3 peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.304 Å
Deposited: 2015-02-27
Authors: Hattori, T., Dementieva, I.S., Montano, S.P., Koide, S.
PDB entry 4yi0: Structure of mouse importin a1 bound to Pom121NLS
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.806 Å
Deposited: 2015-02-27
Authors: Lokareddy, R.K., Cingolani, G.
PDB entry 4yi3: Crystal structure of Gpb in complex with 4a
Classification: TRANSFERASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-02-27
Authors: Kantsadi, A.L., Chatzileontiadou, D.S.M., Stravodimos, G.A., Leonidas, D.D.
PDB entry 4yi5: Crystal structure of Gpb in complex with 4b
Classification: TRANSFERASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-02-27
Authors: Kantsadi, A.L., Chatzileontiadou, D.S.M., Stravodimos, G.A., Leonidas, D.D.
PDB entry 4yi7: Anthranilate bound at active site of anthranilate phosphoribosyl transferase from Acinetobacter (AnPRT; TrpD)
Classification: TRANSFERASE
Source organism: Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.853 Å
Deposited: 2015-02-28
Authors: Evans, G.L., Newton, M.S., Norris, G.E., Patrick, W.M.
PDB entry 4yi8: Crystal structure of non-myristoylated E153A recoverin at 1.2 A resolution with calcium ions bound to EF-hands 2 and 3
Classification: Calcium binding protein
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2015-02-28
Authors: Prem Kumar, R., Ranaghan, M.J., Oprian, D.D.
PDB entry 4yi9: Crystal structure of non-myristoylated E153A recoverin at 1.35 A resolution with a sodium ion bound to EF-hand 2 and calcium ion bound to EF-hand 3
Classification: Calcium Binding protein
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2015-02-28
Authors: Prem Kumar, R., Ranaghan, M.J., Oprian, D.D.
PDB entry 4yia: Structural mechanism of hormone release in thyroxine binding globulin
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2015-03-01
Authors: Zheng, Y.
PDB entry 4yic: CRYSTAL STRUCTURE OF A TRAP TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM BORDETELLA BRONCHISEPTICA RB50 (BB0280, TARGET EFI-500035) WITH BOUND PICOLINIC ACID
Classification: TRANSPORT PROTEIN
Source organism: Bordetella bronchiseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-03-01
Authors: Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Koss, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4yif: Crystal structure of Rv0880
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2015-03-02
Authors: Gao, Y.R., Feng, N., Li, D.F., Bi, L.J.
PDB entry 4yig: vaccinia virus D4/A20(1-50) in complex with dsDNA containing an abasic site and free uracyl
Classification: HYDROLASE
Source organism: Vaccinia virus; Vaccinia virus (strain Copenhagen); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-03-02
Authors: tarbouriech, N., burmeister, W.P., iseni, F.
PDB entry 4yih: Crystal structure of human cytosolic 5'(3')-deoxyribonucleotidase in complex with the inhibitor PB-PVU
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2015-03-02
Authors: Pachl, P., Rezacova, P., Brynda, J.
PDB entry 4yii: Structure of an APC2-UBCH10 complex reveals distinctive cullin-RING ligase mechanism for Anaphase-promoting complex/Cyclosome
Classification: ligase/cell cycle
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.804 Å
Deposited: 2015-03-02
Authors: Brown, N.G., Cho, S.E., Schulman, B.A.
PDB entry 4yij: Crystal structure of Staphylcoccal nuclease variant Delta+PHS A109E at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2015-03-02
Authors: Skerritt, L.A., Bell-Upp, P.C., Schlessman, J.L., Garcia-Moreno, E.B.
PDB entry 4yik: Crystal structure of human cytosolic 5'(3')-deoxyribonucleotidase in complex with the inhibitor PB-PVU
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.483 Å
Deposited: 2015-03-02
Authors: Pachl, P., Rezacova, P., Brynda, J.
PDB entry 4yil: OYE1 W116A COMPLEXED WITH (Z)-METHYL 3-CYANO-3-(4-FLUOROPHENYL)ACRYLATE IN A NON PRODUCTIVE BINDING MODE
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces pastorianus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.461 Å
Deposited: 2015-03-02
Authors: Santangelo, S., Brenna, E., Stewart, J.D., Powell III, R.W.
PDB entry 4yin: Crystal structure of the extended-spectrum beta-lactamase OXA-145
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-03-02
Authors: Meziane-Cherif, D., Bonnet, R., Haouz, A., Courvalin, P.
PDB entry 4yio: X-ray structure of the iron/manganese cambialistic superoxide dismutase from Streptococcus thermophilus
Classification: OXIDOREDUCTASE
Source organism: Streptococcus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-03-02
Authors: Russo Krauss, I., Merlino, A., Pica, A., Sica, F.
PDB entry 4yip: X-ray structure of the iron/manganese cambialistic superoxide dismutase from Streptococcus mutans
Classification: OXIDOREDUCTASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-03-02
Authors: Russo Krauss, I., Merlino, A., Pica, A., Sica, F.
PDB entry 4yiq: Structure of the CEACAM6-CEACAM8 heterodimer
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-03-02
Authors: Bonsor, D.A., Sundberg, E.J.
PDB entry 4yir: Crystal structure of Rad4-Rad23 crosslinked to an undamaged DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.0501 Å
Deposited: 2015-03-02
Authors: Min, J.-H., Chen, X., Kim, Y.
PDB entry 4yis: Crystal Structure of LAGLIDADG Meganuclease I-CpaMI Bound to Uncleaved DNA
Classification: hydrolase/dna
Source organism: Cryphonectria parasitica; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2015-03-02
Authors: Hallinan, J.P., Kaiser, B.K., Stoddard, B.L.
PDB entry 4yit: Crystal Structure of LAGLIDADG Meganuclease I-AabMI Bound to Uncleaved DNA
Classification: hydrolase/dna
Source organism: Gremmeniella abietina; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.24 Å
Deposited: 2015-03-02
Authors: Hallinan, J.P., Stoddard, B.L.
PDB entry 4yiv: Crystal structure of engineered TgAMA1 lacking the DII loop
Classification: IMMUNE SYSTEM
Source organism: Toxoplasma gondii ME49
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2015-03-02
Authors: Parker, M.L., Boulanger, M.J.
PDB entry 4yiw: DIHYDROOROTASE FROM BACILLUS ANTHRACIS WITH SUBSTRATE BOUND
Classification: HYDROLASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2015-03-02
Authors: Lei, H., Santarsiero, B.D., Rice, A.J., Lee, H., Johnson, M.E.
PDB entry 4yix: Structure of MRB1590 bound to ADP
Classification: RNA BINDING PROTEIN
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-03-02
Authors: Shaw, P.L.R., Schumacher, M.A.
PDB entry 4yiy: Structure of MRB1590 bound to AMP-PNP
Classification: RNA BINDING PROTEIN
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.016 Å
Deposited: 2015-03-02
Authors: Shaw, P.L.R., Schumacher, M.A.
PDB entry 4yiz: Crystal structure of engineered TgAMA1 lacking the DII loop in complex with an Eimeria tenella RON2D3 peptide
Classification: IMMUNE SYSTEM
Source organism: Eimeria tenella; Toxoplasma gondii ME49
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-02
Authors: Parker, M.L., Boulanger, M.J.
PDB entry 4yj0: Crystal structure of the DM domain of human DMRT1 bound to 25mer target DNA
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.814 Å
Deposited: 2015-03-02
Authors: Murphy, M.W., Lee, J.K., Rojo, S., Gearhart, M.D., Kurahashi, K., Banerjee, S., Loeuille, G., Bashamboo, A., McElreavey, K., Zarkower, D., Aihara, H., Bardwell, V.J.
PDB entry 4yj1: Crystal structure of T. brucei MRB1590-ADP bound to poly-U RNA
Classification: RNA BINDING PROTEIN
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-03-03
Authors: Schumacher, M.A.
PDB entry 4yj2: Crystal structure of tubulin bound to MI-181
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-03-03
Authors: McNamara, D.E., Torres, J.Z., Yeates, T.O.
PDB entry 4yj3: Crystal structure of tubulin bound to compound 2
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.75 Å
Deposited: 2015-03-03
Authors: McNamara, D.E., Torres, J.Z., Yeates, T.O.
PDB entry 4yj4: Crystal structure of Bcl-xL in complex with the BIM BH3 domain containing Ile155-to-Arg and Glu158-to-phosphoserine mutations
Classification: APOPTOSIS
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-03-03
Authors: Ku, B., Ha, N.-C., Oh, B.-H.
PDB entry 4yj5: Crystal structure of PKM2 mutant
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2015-03-03
Authors: Liu, J.-S., Wu, C.-W., Wang, W.-C.
PDB entry 4yj6: The Crystal Structure of a Bacterial Aryl Acylamidase Belonging to the Amidase signature (AS) enzymes family
Classification: HYDROLASE
Source organism: bacterium CSBL00001
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-03-03
Authors: Lee, S., Park, E.-H., Ko, H.-J., Bang, W.-G., Choi, I.-G.
PDB entry 4yjd: Crystal structure of DAAO(Y228L/R283G) variant (apo form)
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-03-03
Authors: Nakano, S., Yasukawa, K., Kawahara, N., Ishitsubo, E., Tokiwa, H., Asano, Y.
PDB entry 4yje: Crystal structure of APC-ARM in complexed with Amer1-A1
Classification: CELL ADHESION/PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-03-03
Authors: Zhang, Z., Xiao, Y., Wu, G.
PDB entry 4yjf: Crystal structure of DAAO(Y228L/R283G) variant (S-methylbenzylamine binding form)
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-03
Authors: Nakano, S., Yasukawa, K., Kawahara, N., Ishitsubo, E., Tokiwa, H., Asano, Y.
PDB entry 4yjg: Crystal structure of DAAO(Y228L/R283G) variant (R-3-amino 1-phenylbutane binding form)
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-03-03
Authors: Nakano, S., Yasukawa, K., Kawahara, N., Ishitsubo, E., Tokiwa, H., Asano, Y.
PDB entry 4yjh: Crystal structure of DAAO(Y228L/R283G) variant (R-2-phenylpyrrolidine binding form)
Classification: OXIDOREDUCTASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-03-03
Authors: Nakano, S., Yasukawa, K., Kawahara, N., Ishitsubo, E., Tokiwa, H., Asano, Y.
PDB entry 4yji: The Crystal Structure of a Bacterial Aryl Acylamidase Belonging to the Amidase signature (AS) enzymes family
Classification: HYDROLASE
Source organism: bacterium CSBL00001
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2015-03-03
Authors: Choi, I.-G., Lee, S., Park, E.-H., Ko, H.-J., Bang, W.-G.
PDB entry 4yjj: Crystal structure of Phycocyanin from marine cyanobacterium Phormidium rubidum sp. A09DM
Classification: PHOTOSYNTHESIS
Source organism: Phormidium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-03-03
Authors: Gupta, G.D., Kumar, V., Sonani, R.R., Madamwar, D.
PDB entry 4yjk: Crystal structure of C212S mutant of Shewanella oneidensis MR-1 uridine phosphorylase
Classification: TRANSFERASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2015-03-03
Authors: Safonova, T.N., Mordkovich, N.N., Manuvera, V.A., Dorovatovsky, P.V., Veiko, V.P., Popov, V.O., Polyakov, K.M.
PDB entry 4yjl: Crystal structure of APC-ARM in complexed with Amer1-A2
Classification: CELL ADHESION/PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-03-03
Authors: Zhang, Z., Xiao, Y., Wu, G.
PDB entry 4yjm: The apo structure of Agrobacterium tumefaciens ClpS2
Classification: PROTEIN BINDING
Source organism: Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.952 Å
Deposited: 2015-03-03
Authors: Stein, B., Grant, R.A., Sauer, R.T., Baker, T.A.
PDB entry 4yjn: Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with inhibitor UW1639
Classification: Transferase/Transferase Inhibitor
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-03-03
Authors: Merritt, E.A.
PDB entry 4yjo: THE KINASE DOMAIN OF HUMAN SPLEEN TYROSINE (SYK) IN COMPLEX WITH GTC000222
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-03-03
Authors: Somers, D.O., Neu, M.
PDB entry 4yjp: THE KINASE DOMAIN OF HUMAN SPLEEN TYROSINE (SYK) IN COMPLEX WITH GTC000223
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2015-03-03
Authors: Somers, D.O., Neu, M.
PDB entry 4yjq: SYK kinase domain in complex with inhibitor GTC000224
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2015-03-03
Authors: Somers, D.O., Neu, M., Stuckey, J.
PDB entry 4yjr: SYK kinase domain in complex with inhibitor GTC000225
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2015-03-03
Authors: Somers, D.O., Neu, M., Stuckey, J.
PDB entry 4yjs: THE KINASE DOMAIN OF HUMAN SPLEEN TYROSINE (SYK) IN COMPLEX WITH GTC000226
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2015-03-03
Authors: Somers, D.O.
PDB entry 4yjt: THE KINASE DOMAIN OF HUMAN SPLEEN TYROSINE (SYK) IN COMPLEX WITH GTC000233
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2015-03-03
Authors: Somers, D.O., Neu, M., Stuckey, J.
PDB entry 4yju: THE KINASE DOMAIN OF HUMAN SPLEEN TYROSINE (SYK) IN COMPLEX WITH GTC000249
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2015-03-03
Authors: Somers, D.O., Neu, M., Stuckey, J.
PDB entry 4yjv: THE KINASE DOMAIN OF HUMAN SPLEEN TYROSINE (SYK) IN COMPLEX WITH GTC000250
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.652 Å
Deposited: 2015-03-03
Authors: Somers, D.O., Neu, M., Stuckey, J.
PDB entry 4yjw: Crystal structure of a DUF3829 family protein (BVU_3067) from Bacteroides vulgatus ATCC 8482 at 1.80 A resolution
Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION
Source organism: Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-03-03
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4yjx: The structure of Agrobacterium tumefaciens ClpS2 bound to L-phenylalaninamide
Classification: PROTEIN BINDING
Source organism: Agrobacterium fabrum (strain C58 / ATCC 33970)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.547 Å
Deposited: 2015-03-03
Authors: Stein, B., Grant, R.A., Sauer, R.T., Baker, T.A.
PDB entry 4yjy: Crystal structure of Type III polyketide synthase from Oryza sativa
Classification: TRANSFERASE
Source organism: Oryza sativa subsp. indica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2015-03-03
Authors: Wongsantichon, J., Robinson, R.C., Yew, W.S.
PDB entry 4yjz: Human antibody H2526 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
Classification: Viral protein/Immune system
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2015-03-03
Authors: Schmidt, A.G., Harrison, S.C.
PDB entry 4yk0: Crystal structure of the CBP bromodomain in complex with CPI098
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2015-03-03
Authors: Bellon, S.F., Jayaram, H.
PDB entry 4yk1: Crystal Structure of the BID Domain of Bep6 from Bartonella rochalimae
Classification: PROTEIN BINDING
Source organism: Bartonella rochalimae ATCC BAA-1498
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-03-03
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4yk2: Crystal Structure of the BID Domain of Bep9 from Bartonella clarridgeiae
Classification: PROTEIN BINDING
Source organism: Bartonella clarridgeiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-03-03
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4yk3: Crystal Structure of the BID Domain of BepE from Bartonella henselae
Classification: PROTEIN BINDING
Source organism: Bartonella henselae str. Houston-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-03-03
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4yk4: Human antibody 641 I-9 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
Classification: Viral protein/Immune system
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-03-03
Authors: Schmidt, A.G., Harrison, S.C.
PDB entry 4yk5: Crystal Structures of mPGES-1 Inhibitor Complexes
Classification: ISOMERASE/ISOMERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2015-03-04
Authors: Luz, J.G., Antonysamy, S., Kuklish, S.L., Fisher, M.J.
PDB entry 4yk6: Crystal structure of APC-ARM in complexed with Amer1-A4
Classification: PROTEIN BINDING/CELL ADHESION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-03-04
Authors: Zhang, Z., Xiao, Y., Wu, G.
PDB entry 4yk7: Crystal structure of S-hydroxynitrile lyase from Manihot esculenta (His103Leu)
Classification: LYASE
Source organism: Manihot esculenta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-03-04
Authors: Dadashipour, M., Nakano, S., Asano, Y.
PDB entry 4yk8: Crystal structure of the Atg101-Atg13 complex from fission yeast
Classification: PROTEIN TRANSPORT
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-03-04
Authors: Suzuki, H., Noda, N.N.
PDB entry 4yk9: Complex structure of BCL-XL and mutated BIM BH3 domain
Classification: APOPTOSIS
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-03-04
Authors: Ha, N.C., Kim, J.S.
PDB entry 4yka: The structure of Agrobacterium tumefaciens ClpS2 in complex with L-tyrosinamide
Classification: PROTEIN BINDING
Source organism: Agrobacterium fabrum (strain C58 / ATCC 33970)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.801 Å
Deposited: 2015-03-04
Authors: Stein, B., Grant, R.A., Sauer, R.T., Baker, T.A.
PDB entry 4ykb: Structure of GUN4 from Chlamydomonas reinhardtii
Classification: PLANT PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2015-03-04
Authors: Tabriz, S.T., Langley, D.B., Willows, R.D., Duff, A.P., Harrop, S.J.
PDB entry 4ykc: Crystal structure of cerebral cavernous malformation 2 C-terminal adaptor domain
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-03-04
Authors: Ding, J., Wang, X., Wang, D.C.
PDB entry 4ykd: Crystal structure of truncated cerebral cavernous malformation 2 C-terminal adaptor domain
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.932 Å
Deposited: 2015-03-04
Authors: Ding, J., Wang, X., Wang, D.C.