LiteFold/PDB huggingface dataset:
PDB entry 9gvo: type-I interferons autoantibodies pmab15 and pmab14 in complex with Interferon alpha-2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-09-25
Authors: Duquerroy, S., Rey, F., Ahouzi, O., Mahevas, M., Chappert, P.
PDB entry 9gvp: Human PPAR-gamma ligand binding domain in complex with WG115
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-09-25
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gvq: MUC5AC mucin amino acids 28 to 1483
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-09-25
Authors: Haberman, M., Kamyshinsky, R., Fass, D.
PDB entry 9gvr: mEos4b-L93M photoconvertible fluorescent protein
Classification: FLUORESCENT PROTEIN
Source organism: Lobophyllia hemprichii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-09-25
Authors: Adam, V.
PDB entry 9gvs: Human PPAR-gamma ligand binding domain in complex with AK176_C
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-25
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gvt: Human PPAR-gamma ligand binding domain in complex with AK176_D
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-09-25
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gvu: Human Rab27A in complex with cyclic peptide IMP-2660
Classification: EXOCYTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-25
Authors: Petracca, R., Tersa, M., De Vita, E., Morgan, M.R., Cota, E., Tate, E.W.
PDB entry 9gvv: Quadruplex-duplex hybrid (QDH) complex with 360A from PIM1 oncogene.
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-09-25
Authors: Ghosh, A., Lenarcic, M.Z., Harnos, J., Trantirek, L.
PDB entry 9gvw: NNMT-SAH IN COMPLEX WITH 4
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.241 Å
Deposited: 2024-09-26
Authors: Johansson, P.
PDB entry 9gvx: M2 mutant (R111K:Y134F:T54V:R132Q:P39Y:R59Y) of human cellular retinoic acid binding protein II - 1e conjugate
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-26
Authors: Tassone, G., Pozzi, C.
PDB entry 9gvy: M2 mutant (R111K:Y134F:T54V:R132Q:P39Y:R59Y) of human cellular retinoic acid binding protein II - 1m conjugate
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-09-26
Authors: Tassone, G., Pozzi, C.
PDB entry 9gvz: M2 mutant (R111K:Y134F:T54V:R132Q:P39Y:R59Y) of human cellular retinoic acid binding protein II - 1j conjugate
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-09-26
Authors: Tassone, G., Pozzi, C.
PDB entry 9gw0: M2 mutant (R111K:Y134F:T54V:R132Q:P39Y:R59Y) of human cellular retinoic acid binding protein II - 1l conjugate
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-09-26
Authors: Tassone, G., Pozzi, C.
PDB entry 9gw1: Cryo-EM structure of alpha-carboxysome T=4 mini-shell containing CTD only mutant of CsoSCA
Classification: STRUCTURAL PROTEIN
Source organism: Halothiobacillus neapolitanus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-09-26
Authors: Ng, P.C., Basle, A., Marles-Wright, J., Liu, L.
PDB entry 9gw2: State 2 MAP 1 SETD2 bound to proximal H3 of upstream nucleosome
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.84 Å
Deposited: 2024-09-26
Authors: Walshe, J.L., Ochmann, M., Dienemann, C., Cramer, P.
PDB entry 9gw3: Human PPAR-gamma ligand binding domain in complex with LW56
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gw4: Human PPAR-gamma ligand binding domain in complex with LW78
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gw5: type-I interferon autoantibodies pmab3, pmab19 and pmab14 in complex with Interferon alpha-2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2024-09-26
Authors: Duquerroy, S., Rey, F., Mahevas, M., Chappert, P., Ahouzi, O.
PDB entry 9gw6: Lys9DabMC6*a 2-Delta
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2024-09-26
Authors: Maglio, O., Lombardi, A., Chino, M., Pirro, F.
PDB entry 9gw7: Human PPAR-gamma ligand binding domain in complex with LW76
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gw8: Human PPAR-gamma ligand binding domain in complex with LW75
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gw9: Cryo-EM structure of Gephyrin E domain filament interface
Classification: PROTEIN BINDING
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-09-26
Authors: Macha, A., Gunkel, M., Schwarz, G., Behrmann, E., Burdina, N.
PDB entry 9gwa: NNMT-SAH IN COMPLEX WITH 5
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-26
Authors: Johansson, P.
PDB entry 9gwb: Human PPAR-gamma ligand binding domain in complex with LW69
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gwc: Human PPAR-gamma ligand binding domain in complex with LW99
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gwd: ZT-KP6-1: AN EFFECTOR FROM ZYMOSEPTORIA TRITICI
Classification: UNKNOWN FUNCTION
Source organism: Zymoseptoria tritici ST99CH_1E4
Experimental method: SOLUTION NMR
Deposited: 2024-09-26
Authors: Barthe, P., de Guillen, K.
PDB entry 9gwe: Human PPAR-gamma ligand binding domain in complex with LW87
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gwf: Human PPAR-gamma ligand binding domain in complex with LW100
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gwg: Human PPAR-gamma ligand binding domain in complex with LW88
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gwh: Human PPAR-gamma ligand binding domain in complex with LW77
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gwi: Human PPAR-gamma ligand binding domain in complex with LW23
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-26
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gwj: Crystal structure of CINP-c1orf109 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.69 Å
Deposited: 2024-09-26
Authors: Masternak, M., Weisser, M., Montoya, G.
PDB entry 9gwk: Human PPAR-gamma ligand binding domain in complex with AKGO6A
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gwl: Human PPAR-gamma ligand binding domain in complex with AKGO157
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gwm: Human PPAR-gamma ligand binding domain in complex with AKGO108
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gwn: Human PPAR-gamma ligand binding domain in complex with LW30
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-27
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gwo: SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and theophylline derivative LAS 54571126
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-09-27
Authors: Kremling, V., Sprenger, J., Oberthuer, D., Kiene, A.
PDB entry 9gwp: Human PPAR-gamma ligand binding domain in complex with MRL-871 with two distinct binding modes
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-09-27
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gwq: Human PPAR-gamma ligand binding domain in complex with AKGO6D
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gwr: Human PPAR-gamma ligand binding domain in complex with AKGO10
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-27
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gws: Human PPAR-gamma ligand binding domain in complex with AKGO8
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gwt: crystal structure of 23ME-00610 Fab in complex with human CD200R1
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2024-09-27
Authors: Huang, Y.M., Ganichkin, O.M.
PDB entry 9gwu: Crystal structure of sulfoquinovose-1-dehydrogenase from Pseudomonas Putida (sulfo-ED pathway)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-09-27
Authors: Sharma, M., Davies, G.J.
PDB entry 9gwv: Crystal structure of sulfoquinovose-1-dehydrogenase from Pseudomonas Putida in complex with NAD+ (sulfo-ED pathway)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-09-27
Authors: Sharma, M., Davies, G.J.
PDB entry 9gww: Crystal structure of sulfoquinovose-1-dehydrogenase from Pseudomonas Putida in complex with sulfoquinovose substrate (sulfo-ED pathway)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-09-27
Authors: Sharma, M., Davies, G.J.
PDB entry 9gwx: Human PPAR-gamma ligand binding domain in complex with AKGO141
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gwy: Human PPAR-gamma ligand binding domain in complex with AKGO78
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gwz: Crystal structure of 23ME-00610 Fab
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2024-09-27
Authors: Huang, Y.M., Ganichkin, O.M.
PDB entry 9gx0: Human PPAR-gamma ligand binding domain in complex with AKGO79
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gx1: Human PPAR-gamma ligand binding domain in complex with AKGO80
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gx2: Human PPAR-gamma ligand binding domain in complex with AKGO82
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gx3: Human PPAR-gamma ligand binding domain in complex with AKGO12
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-09-27
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gx4: Human PPAR-gamma ligand binding domain in complex with AKGO156
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-27
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gx5: Human PPAR-gamma ligand binding domain in complex with AKGO173
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gx6: Human PPAR-gamma ligand binding domain in complex with AKGO166
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-09-27
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gx7: Human PPAR-gamma ligand binding domain in complex with WG17
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-27
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gx8: Crystal structure of CIM-2, a membrane-bound B1 metallo-beta-lactamase from Chryseobacterium indologenes
Classification: ANTIMICROBIAL PROTEIN
Source organism: Chryseobacterium indologenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-09-28
Authors: Hinchliffe, P., Spencer, J.
PDB entry 9gx9: Crystal structure of CJO-1, a membrane-bound B1 metallo-beta-lactamase from Chryseobacterium joostei
Classification: ANTIMICROBIAL PROTEIN
Source organism: Chryseobacterium joostei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2024-09-28
Authors: Hinchliffe, P., Spencer, J.
PDB entry 9gxa: CENP-A/H4 di-tetrasome assembled on alpha-satellite DNA.
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.01 Å
Deposited: 2024-09-29
Authors: Ali-Ahmad, A., Sekulic, N.
PDB entry 9gxb: Room temperature structure of FAD-containing ferrodoxin-NADP reductase from Brucella ovis at EuXFEL
Classification: OXIDOREDUCTASE
Source organism: Brucella ovis ATCC 25840
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-09-29
Authors: Martinez-Julvez, M., Martin-Garcia, J.M., Medina, M.
PDB entry 9gxc: Room temperature structure of FAD-containing ferrodoxin-NADP reductase from Brucella ovis at LCLS
Classification: OXIDOREDUCTASE
Source organism: Brucella ovis ATCC 25840
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-29
Authors: Martinez-Julvez, M., Martin-Garcia, J.M., Medina, M.
PDB entry 9gxd: Human PPAR-gamma ligand binding domain in complex with AKGO27
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-09-30
Authors: Koops, A.A., Oerlemans, G.J.M., Brunsveld, L.
PDB entry 9gxe: Structure of the SARS-CoV spike glycoprotein in complex with a homotrimeric Bicycle molecule
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-09-30
Authors: Drulyte, I., Pellegrino, S., Harman, M., Bezerra, G.A.
PDB entry 9gxf: Crystal structure of Lotus japonicus CHIP13 extracellular domain
Classification: PLANT PROTEIN
Source organism: Lotus japonicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-09-30
Authors: Gysel, K., Andersen, K.R.
PDB entry 9gxg: Structure of the SARS-CoV spike glycoprotein in complex with a biparatopic Bicycle molecule
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.92 Å
Deposited: 2024-09-30
Authors: Drulyte, I., Pellegrino, S., Harman, M., Bezerra, G.A.
PDB entry 9gxh: Nanobody bound to TBA G-quadruplex
Classification: IMMUNE SYSTEM
Source organism: Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-09-30
Authors: Hadzi, S., Pevec, M.
PDB entry 9gxi: Subtomogram average of fascin-actin complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 9 Å
Deposited: 2024-09-30
Authors: Song, X., Corbalan-Garcia, S., Huiskonen, J.T.
PDB entry 9gxj: Aerolysin E254A/E258A in styrene-maleic acid lipid particles
Classification: TOXIN
Source organism: Aeromonas hydrophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-09-30
Authors: Anton, J.S., Bada Juarez, J.F., Marcaida, M.J., Dal Peraro, M.
PDB entry 9gxk: C. thermocellum UvrA (basal conformation)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxl: C. thermocellum UvrA in complex with AMPPNP (basal conformation)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxm: C. thermocellum UvrA in complex with unmodified DNA and AMPPNP (basal conformation)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxn: C. thermocellum UvrA in complex with unmodified DNA and AMPPNP (ATP-bound conformation 1)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxo: C. thermocellum UvrA in complex with unmodified DNA and AMPPNP (ATP-bound conformation 2)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxp: C. thermocellum UvrA in complex with DNA with an abasic site (basal conformation)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxq: C. thermocellum UvrA in complex with DNA with an abasic site and AMPPNP (ATP-bound conformation 1)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxr: C. thermocellum UvrA in complex with DNA with an abasic site and AMPPNP (ATP-bound conformation 2)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxs: C. thermocellum UvrA in complex with DNA with a fluorescein modification (basal conformation)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxt: C. thermocellum UvrA in complex with DNA with a fluorescein modification and AMPPNP (ATP-bound conformation 1)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxu: C. thermocellum UvrA (K647A) in complex with DNA with a fluorescein modification (basal conformation)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.81 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxv: C. thermocellum UvrA in complex with DNA with a fluorescein modification and ADP (basal conformation)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxw: C. thermocellum UvrA (K39A) in complex with DNA with a fluorescein modification and AMPPNP (basal conformation)
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2024-09-30
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gxx: 70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codon
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-10-01
Authors: Krishnaswamy, S., Larsson, D.S.D., Selmer, M.
PDB entry 9gxy: Crystal structure of protein kinase CK2 catalytic subunit (CSNK2A2 gene product) in complex with the dual CK2/HDAC inhibitor IOR-160
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2024-10-01
Authors: Werner, C., Lindenblatt, D., Niefind, K.
PDB entry 9gxz: Structure of the Medicago truncatula LYR4 ectodomain
Classification: PLANT PROTEIN
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-10-01
Authors: Ruebsam, H., Gysel, K., Andersen, K.R.
PDB entry 9gy0: Cryo_EM structure of human FAN1 R507H mutant in complex with 5' flap DNA substrate and PCNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2024-10-01
Authors: Jeyasankar, G., Salerno-Kochan, A., Thomsen, M.
PDB entry 9gy1: High resolution crystal structure of StM23 peptidoglycan hydrolase
Classification: HYDROLASE
Source organism: Streptococcus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-10-01
Authors: Kaus-Drobek, M., Nowacka, M.
PDB entry 9gy2: Non-Hemolytic Phospholipase C (PLC N)
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa UCBPP-PA14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-10-01
Authors: Sabharwal, N.S., Labahn, J.L.
PDB entry 9gy3: Crystal structure of CRBNmidi in complex with (S)-dHTC1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-10-01
Authors: Rutter, Z.J., Shaum, J.B., Ciulli, A., Erb, M.A.
PDB entry 9gy4: 60S ribosomal subunit in complex with E3-UFM1 ligase and RQC machinery components NEMF and LTN1 (Composite map)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-10-01
Authors: Penchev, I., Gumbin, S., Becker, T., Kopito, R., Beckmann, R.
PDB entry 9gy5: Crystal structure of the catalytic domain from the BoNT-like toxin complex PG1 of Paeniclostridium ghonii
Classification: TOXIN
Source organism: Paraclostridium ghonii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-10-01
Authors: Masuyer, G., Stenmark, P.
PDB entry 9gy6: Mycobacterial cytochrome bc1:aa3 with inhibitor
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-10-01
Authors: lamers, M.H., Verma, A.K.
PDB entry 9gy7: C. thermocellum UvrA-UvrB in complex with DNA with a fluorescein modification and AMPPNP
Classification: DNA BINDING PROTEIN
Source organism: Acetivibrio thermocellus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-10-01
Authors: Nirwal, S., Czarnocki-Cieciura, M., Nowotny, M.
PDB entry 9gy8: Vitamin D Receptor complex with Sila-A
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-01
Authors: Rochel, N.
PDB entry 9gya: Vitamin D Receptor in complex with Sila-e
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-10-01
Authors: Rochel, N.
PDB entry 9gyb: Crystal structure of the recombinant CODH from Rhodopspirillum rubrum produced in Escherichia coli
Classification: OXIDOREDUCTASE
Source organism: Rhodospirillum rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-10-01
Authors: Cavazza, C., Contaldo, U.
PDB entry 9gyc: Vitamin D receptor in complex with Sila-d
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-01
Authors: Rochel, N.
PDB entry 9gyd: Ferredoxin Wild-type -As-isolated state
Classification: OXIDOREDUCTASE
Source organism: Spinacia oleracea
Experimental method: X-RAY DIFFRACTION
Resolution: 0.92 Å
Deposited: 2024-10-01
Authors: Carr, S.B., Wei, J., Vincent, K.A.
PDB entry 9gye: Hemolytic Phospholipase C (PLC H)
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PA14
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-10-01
Authors: Sabharwal, N.S., Labahn, J.L.
PDB entry 9gyf: Ku70/80 with PAXX peptide mutation K193R
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-10-02
Authors: Chaplin, A.K., Malewicz, M.
PDB entry 9gyg: The structure of ornithine decarboxylase from Leishmania infantum in complex with PLP
Classification: LYASE
Source organism: Leishmania infantum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-10-02
Authors: Fiorillo, A., Antonelli, A., Ilari, A., Tria, G.
PDB entry 9gyh: HEW Lysozyme with His 15 functionalized with iodoacetamide
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-10-02
Authors: da Silva, J.S.P., Delgado, J.M.L., Bruno, F., Calderone, V., Ravera, E.
PDB entry 9gyi: Cryo-EM structure of the capsid-forming phage-inducible chromosomal island (cf-PICI) EcCI2
Classification: VIRUS LIKE PARTICLE
Source organism: Escherichia coli O157:H7 str. EDL933
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2024-10-02
Authors: Patkowski, J.B., Penades, J.R., Costa, T.R.D.
PDB entry 9gyj: Vitamin D receptor in complex with Sila-c
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-10-02
Authors: Rochel, N.
PDB entry 9gyk: Vitamin D receptor in complex with Sila-f
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-02
Authors: Rochel, N.
PDB entry 9gyl: Ferredoxin Wild-type -Oxidised state
Classification: OXIDOREDUCTASE
Source organism: Spinacia oleracea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2024-10-02
Authors: Carr, S.B., Wei, J., Vincent, K.A.
PDB entry 9gyn: Ferredoxin Wild-type - Reduced state
Classification: OXIDOREDUCTASE
Source organism: Spinacia oleracea
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2024-10-02
Authors: Carr, S.B., Wei, J., Vincent, K.A.
PDB entry 9gyo: CryoEM structure of Gs-coupled GPBAR with small molecule agonist P395
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-10-02
Authors: Frechard, A., Brooks, I.
PDB entry 9gyp: Crystal structure of human Histidine Triad Nucleotide-Binding Protein 1 in complex with KV24
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2024-10-02
Authors: Dolot, R.M., Lechner, S., Sethiya, J.P., Wagner, C.R., Bracher, F., Kuster, B.
PDB entry 9gyq: Crystal structure of human Histidine Triad Nucleotide-Binding Protein 1 in complex with KV30
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2024-10-02
Authors: Dolot, R.M., Lechner, S., Sethiya, J.P., Wagner, C.R., Bracher, F., Kuster, B.
PDB entry 9gyr: Ferredoxin CNF labelled, oxidised state
Classification: OXIDOREDUCTASE
Source organism: Spinacia oleracea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2024-10-02
Authors: Carr, S.B., Wei, J., Vincent, K.A.
PDB entry 9gys: X-ray structure of the adduct formed upon reaction of RNase A with [Ru2(D-p-FPhF)(O2CCH3)2(O2CO)] complex
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2024-10-02
Authors: Teran, A., Ferraro, G., Merlino, A.
PDB entry 9gyt: High resolution structure of B. oleracea mitoribosome
Classification: RIBOSOME
Source organism: Brassica oleracea var. botrytis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.11 Å
Deposited: 2024-10-02
Authors: Waltz, F., Skaltsogiannis, V., Giege, P.
PDB entry 9gyu: Ferredoxin CNF-labelled reduced state
Classification: OXIDOREDUCTASE
Source organism: Spinacia oleracea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2024-10-03
Authors: Carr, S.B., Wei, J., Vincent, K.A.
PDB entry 9gyy: Crystal structure of domain-of-unknown-function DUF4867 from Bacillus megaterium
Classification: ISOMERASE
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-10-03
Authors: Sharma, M., Davies, G.J.
PDB entry 9gyz: Crystal structure of domain-of-unknown-function DUF4867 from Bacillus megaterium (unmodelled additional ligand density at active site)
Classification: ISOMERASE
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-10-03
Authors: Sharma, M., Davies, G.J.
PDB entry 9gz0: FeFe Hydrogenase from Desulfovibrio desulfuricans labelled with cyanophenylalanine - oxidised state
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio desulfuricans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2024-10-03
Authors: Carr, S.B., Duan, Z., Rodroguez-Macia, P., Vincent, K.A.
PDB entry 9gz1: Beta-cardiac myosin interacting heads motif complexed to mavacamten
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-10-03
Authors: McMillan, S.N., Pitts, J.R.T., Barua, B., Winkelmann, D.A., Scarff, C.A.
PDB entry 9gz2: Beta-cardiac heavy meromyosin motor domain in the primed state complexed to mavacamten
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-03
Authors: McMillan, S.N., Pitts, J.R.T., Barua, B., Winkelmann, D.A., Scarff, C.A.
PDB entry 9gz3: Beta-cardiac heavy meromyosin motor domain in the primed state
Classification: MOTOR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-10-03
Authors: McMillan, S.N., Pitts, J.R.T., Barua, B., Winkelmann, D.A., Scarff, C.A.
PDB entry 9gz4: FeFe Hydrogenase from Desulfovibrio desulfuricans labelled with cyanophenylalanine - reduced state
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio desulfuricans
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2024-10-03
Authors: Carr, S.B., Duan, Z., Rodroguez-Macia, P., Vincent, K.A.
PDB entry 9gz5: X-ray structure of Leptospira interrogans Histone deacetylase 11 (HDAC11) in complex with cis-5-dodecenoic acid.
Classification: HYDROLASE
Source organism: Leptospira interrogans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-10-03
Authors: Novakova, Z., Barinka, C., Motlova, L.
PDB entry 9gz6: WT-IAPP cryo-EM structure Type SS - control reaction
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-10-03
Authors: Wilkinson, M., Taylor, A.I.P., Xu, Y., Chakraborty, P., Brinkworth, A., Willis, L.F., Zhuravleva, A., Ranson, N.A., Foster, R., Radford, S.E.
PDB entry 9gz7: Human PPAR-gamma ligand binding domain in complex with AKGO29
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-10-03
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gz8: Human PPAR-gamma ligand binding domain in complex with AKGO46
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-03
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gz9: Human PPAR-gamma ligand binding domain in complex with AKGO48
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-10-03
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gza: Human PPAR-gamma ligand binding domain in complex with AKGO50
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-10-03
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gzb: Human PPAR-gamma ligand binding domain in complex with AKGO52
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-03
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gzc: Human PPAR-gamma ligand binding domain in complex with AKGO142
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-10-03
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gzd: Androgen Receptor ligand-binding domain in complex with 11-ketodihydrotestosterone
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2024-10-03
Authors: Alegre-Marti, A., Zwart, W., Fuentes-Prior, P., Estebanez-Perpina, E.
PDB entry 9gze: Human PPAR-gamma ligand binding domain in complex with AKGO72
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-03
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gzf: Human PPAR-gamma ligand binding domain in complex with AKGO88
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-10-03
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gzg: Crystal structure of CTPR4E4 mutant
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-10-03
Authors: Liutkus, M., Cortajarena, A.L.
PDB entry 9gzh: PDGFRA-T674I in complex with covalent ponatinib derivative 19
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-10-04
Authors: Teuber, A., Rauh, D., Mueller, M.P.
PDB entry 9gzi: Human PPAR-gamma ligand binding domain in complex with LW98
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-10-04
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9gzj: Crystal structure of the L. monocytogenes RmlT in complex with 3-RboP-(CH2)6NH2
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-10-04
Authors: Cereija, T.B., Morais-Cabral, J.H.
PDB entry 9gzk: Crystal structure of the L. monocytogenes RmlT in complex with 4-RboP-(CH2)6NH2
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2024-10-04
Authors: Cereija, T.B., Morais-Cabral, J.H.
PDB entry 9gzl: Apo FeFe Hydrogenase from Desulfovibrio desulfuricans labelled with cyanophenylalanine
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio desulfuricans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2024-10-04
Authors: Carr, S.B., Duan, Z., Rodriguez-Macia, P., Vincent, K.A.
PDB entry 9gzm: Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFAM/TFB2M/DNA/RNA) with a 2-mer RNA (pppGpA) and GTP poised for catalysis (pre-IC3)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-10-04
Authors: Goovaerts, Q., Shen, J., Ajjugal, Y., De Wijngaert, B., Patel, S.S., Das, K.
PDB entry 9gzn: Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFB2M/DNA/RNA) without TFAM; and with a 2-mer RNA (pppGpA) and GTP poised for catalysis (pre-IC3-TFAM)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-10-04
Authors: Goovaerts, Q., Shen, J., Ajjugal, Y., De Wijngaert, B., Patel, S.S., Das, K.
PDB entry 9gzo: Cryo-EM structure of the human mitochondrial RNA polymerase transcription initiation complex (POLRMT/TFB2M/DNA/RNA) without TFAM; and with a slipped 3-mer RNA, pppGpGpA (slipped IC3-TFAM)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-10-04
Authors: Goovaerts, Q., Shen, J., Ajjugal, Y., De Wijngaert, B., Patel, S.S., Das, K.
PDB entry 9gzp: WT-IAPP cryo-EM structure Type LL - control reaction
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-04
Authors: Wilkinson, M., Taylor, A.I.P., Xu, Y., Chakraborty, P., Brinkworth, A., Willis, L.F., Zhuravleva, A., Ranson, N.A., Foster, R., Radford, S.E.
PDB entry 9gzq: Structure of ForCE lacking the Helical Membrane Plug-in (HMP; DUF1641)
Classification: ELECTRON TRANSPORT
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.626 Å
Deposited: 2024-10-04
Authors: Arnoux, P., Cherrier, M.V., Nicolet, Y., Legrand, P., Broc, M., Seduk, F., Arias-Cartin, R., Magalon, A., Walburger, A.
PDB entry 9gzr: Tad pilus alignment complex protein RcpC
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-10-04
Authors: Evans, S.L., Peretiazhko, I., Bergeron, J.R.C.
PDB entry 9gzs: WT-IAPP cryo-EM structure Type LLU - control reaction
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-10-04
Authors: Wilkinson, M., Taylor, A.I.P., Xu, Y., Chakraborty, P., Brinkworth, A., Willis, L.F., Zhuravleva, A., Ranson, N.A., Foster, R., Radford, S.E.
PDB entry 9gzt: WT-IAPP cryo-EM structure Type LLUU - control reaction
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-04
Authors: Wilkinson, M., Taylor, A.I.P., Xu, Y., Chakraborty, P., Brinkworth, A., Willis, L.F., Zhuravleva, A., Ranson, N.A., Foster, R., Radford, S.E.
PDB entry 9gzu: Crystal structure of apo-bacterioferritin (Bfr) from Brucella melitentsis
Classification: METAL BINDING PROTEIN
Source organism: Brucella melitensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2024-10-04
Authors: Scaillet, T., Champagne, C., Wouters, J.
PDB entry 9gzv: Crystal structure of human NUDT14 in complex with a potent inhibitor (MA-955-9)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-10-04
Authors: Balikci, E., Feyerherm, C., Bradshaw, W., Apostolidou, M., Adcock, C., McGown, A., Spencer, J., Huber, K.
PDB entry 9gzw: WT-IAPP cryo-EM structure Type LL, doxazosin reaction
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-10-04
Authors: Wilkinson, M., Taylor, A.I.P., Xu, Y., Chakraborty, P., Brinkworth, A., Willis, L.F., Zhuravleva, A., Ranson, N.A., Foster, R., Radford, S.E.
PDB entry 9gzx: WT-IAPP cryo-EM structure Type LLU, doxazosin reaction
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-10-04
Authors: Wilkinson, M., Taylor, A.I.P., Xu, Y., Chakraborty, P., Brinkworth, A., Willis, L.F., Zhuravleva, A., Ranson, N.A., Foster, R., Radford, S.E.
PDB entry 9gzy: WT-IAPP cryo-EM structure Type LLUU, doxazosin reaction
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-10-04
Authors: Wilkinson, M., Taylor, A.I.P., Xu, Y., Chakraborty, P., Brinkworth, A., Willis, L.F., Zhuravleva, A., Ranson, N.A., Foster, R., Radford, S.E.
PDB entry 9h02: Crystal structure of human CREBBP histone acetyltransferase domain in complex with a bisubstrate inhibitor, Lys-CoA
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2024-10-07
Authors: Mechaly, A.E., Cui, G., Green, M.R., Rodrigues-Lima, F.
PDB entry 9h03: NMHase, dihydrouridine, 2.1A, CC_mask=0.7859
Classification: HYDROLASE
Source organism: Glutamicibacter protophormiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-10-07
Authors: Toedtli, P., Rudolph, M.G.
PDB entry 9h04: Crystal structure of Halide methyltransferase from Tulasnella calospora in complex with SAH and mesitylene sulfonate
Classification: TRANSFERASE
Source organism: Tulasnella calospora MUT 4182
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-10-07
Authors: Bolotova, S.B., Seebeck, F.P.
PDB entry 9h05: Crystal structure of Halide methyltransferase from Tulasnella calospora in complex with SAH
Classification: TRANSFERASE
Source organism: Tulasnella calospora MUT 4182
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-10-07
Authors: Bolotova, S.B., Seebeck, F.P.
PDB entry 9h06: Crystal structure of Halide methyltransferase from Tulasnella calospora in complex with sinefungin and mesitylene sulfonate
Classification: TRANSFERASE
Source organism: Tulasnella calospora MUT 4182
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2024-10-07
Authors: Bolotova, S.B., Seebeck, F.P.
PDB entry 9h07: Crystal structure of Halide methyltransferase from Tulasnella calospora in complex with SAH and mesitylene sulfonate at room temperature
Classification: TRANSFERASE
Source organism: Tulasnella calospora MUT 4182
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2024-10-07
Authors: Bolotova, S.B., Seebeck, F.P.
PDB entry 9h08: Crystal structure of Halide methyltransferase from Tulasnella calospora in complex with SAH at room temperature
Classification: TRANSFERASE
Source organism: Tulasnella calospora MUT 4182
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2024-10-07
Authors: Bolotova, S.B., Seebeck, F.P.
PDB entry 9h09: Crystal structure of Halide methyltransferase from Tulasnella calospora in complex with sinefungin and mesitylene sulfonate at room temperature
Classification: TRANSFERASE
Source organism: Tulasnella calospora MUT 4182
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2024-10-07
Authors: Bolotova, S.B., Seebeck, F.P.
PDB entry 9h0a: Plasmodium falciparum lipocalin in complex with INE963
Classification: UNKNOWN FUNCTION
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-10-07
Authors: Mortensen, S., Sondermann, H.
PDB entry 9h0b: Crystal structure of the Porcine Hemagglutinating Encephalomyelitis Virus (PHEV) receptor binding domain in complex with porcine DPEP1.
Classification: VIRAL PROTEIN
Source organism: Porcine hemagglutinating encephalomyelitis virus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-10-08
Authors: Fernandez, I., Rey, F.
PDB entry 9h0c: Crystal structure of BiP ATPase domain in complex with CDNF C-terminal domain at 1.65 angstroms resolution
Classification: CHAPERONE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-10-08
Authors: Fudo, S., Shpironok, O., Saarma, M., Kajander, T.
PDB entry 9h0d: Crystal structure of Halide methyltransferase from Moniliophthora roreri in complex with SAH
Classification: TRANSFERASE
Source organism: Moniliophthora roreri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-10-08
Authors: Bolotova, S.B., Seebeck, F.P.
PDB entry 9h0f: SARS-CoV-2 Mpro in complex with a silicon-containing inhibitor
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-10-08
Authors: Andrews-Clark, T.C., Laczi, D., Schoenbauer, S., Brewitz, L., Schofield, C.J., Walsh, M.
PDB entry 9h0g: Crystal structure of Halide methyltransferase from Dichomitus squalens in complex with SAH
Classification: TRANSFERASE
Source organism: Dichomitus squalens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-10-08
Authors: Bolotova, S.B., Seebeck, F.P.
PDB entry 9h0h: X-RAY CRYSTAL STRUCTURE OF THE CsPYL1-OPABACTIN-HAB1 TERNARY COMPLEX
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Citrus sinensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-10-08
Authors: Rivera-Moreno, M., Infantes, L., Albert, A.