LiteFold/PDB huggingface dataset:
PDB entry 7l6l: Crystal Structure of the DNA-binding Transcriptional Repressor DeoR from Escherichia coli str. K-12
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-12-23
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Dubrovska, I., Wiersum, G., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7l6m: Cryo-EM structure of DH898.1 Fab-dimer from local refinement of the Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2020-12-23
Authors: Manne, K., Edwards, R.J., Acharya, P.
PDB entry 7l6n: The Mycobacterium tuberculosis ClpB disaggregase hexamer structure with three locally refined ClpB middle domains and three DnaK nucleotide binding domains
Classification: CHAPERONE
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 7 Å
Deposited: 2020-12-23
Authors: Yin, Y.Y., Feng, X., Li, H.
PDB entry 7l6o: Cryo-EM structure of HIV-1 Env CH848.3.D0949.10.17chim.6R.DS.SOSIP.664
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-12-23
Authors: Manne, K., Edwards, R.J., Acharya, P.
PDB entry 7l6p: Crystal structure of dihydropteroate synthase from Stenotrophomonas maltophilia with active site-bound imidazole
Classification: TRANSFERASE
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-12-23
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7l6q: Unliganded ELIC in styrene-maleic-acid nanodiscs at 2.5-Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Dickeya dadantii (strain 3937)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2020-12-23
Authors: Grosman, C., Kumar, P.
PDB entry 7l6r: Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and Manganese (Mn).
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-12-23
Authors: Minasov, G., Shuvalova, L., Rosas-Lemus, M., Kiryukhina, O., Brunzelle, J.S., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7l6s: Crystal structure of the ATPase and transducer domains of DNA topoisomerase II from Balamuthia mandrillaris CDC:V039: baboon/San Diego/1986
Classification: ISOMERASE
Source organism: Balamuthia mandrillaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-12-23
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7l6t: Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and two Magnesium (Mg) ions.
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2020-12-23
Authors: Minasov, G., Shuvalova, L., Rosas-Lemus, M., Kiryukhina, O., Brunzelle, J.S., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7l6u: Unliganded ELIC in POPC-only nanodiscs at 3.3-Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Dickeya dadantii (strain 3937)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-12-23
Authors: Kumar, P., Grosman, C.
PDB entry 7l6v: Crystal structure of BoNT/A-LC-JPU-A5-JPU-C1-JPU-H7-JPU-D12-ciA-F12
Classification: ANTITOXIN
Source organism: Clostridium botulinum; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2020-12-24
Authors: Lam, K., Jin, R.
PDB entry 7l6w: SFX structure of the MyD88 TIR domain higher-order assembly
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-12-24
Authors: Clabbers, M.T.B., Holmes, S., Muusse, T.W., Vajjhala, P., Thygesen, S.J., Malde, A.K., Hunter, D.J.B., Croll, T.I., Flueckiger, L., Nanson, J.D., Rahaman, M.H., Aquila, A., Hunter, M.S., Liang, M., Yoon, C.H., Zhao, J., Zatsepin, N.A., Abbey, B., Sierecki, E., Gambin, Y., Stacey, K.J., Darmanin, C., Kobe, B., Xu, H., Ve, T.
PDB entry 7l6x: Crystal structure of the tandem bromodomain (BD1, BD2) of human TAF1 bound to GNE-371
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2020-12-24
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7l6y: Crystal Structure of the Peptidyl-Prolyl Cis-Trans Isomerase (PpiB) from Streptococcus pyogenes.
Classification: ISOMERASE
Source organism: Streptococcus pyogenes MGAS5005
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2020-12-24
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7l6z: Crystal Structure of Peptidyl-Prolyl Cis-Trans Isomerasefrom (PpiB) Streptococcus pneumoniae R6
Classification: ISOMERASE
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2020-12-24
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Dubrovska, I., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7l70: The eukaryotic translation initiation factor 2B from Homo sapiens in its apo form
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-12-24
Authors: Wang, L., Schoof, M., Lawrence, R., Boone, M., Frost, A., Walter, P.
PDB entry 7l71: Crystal Structure of the PDZ Domain of the Serine Peptidase HtrA from Streptococcus agalactiae.
Classification: PROTEIN BINDING
Source organism: Streptococcus agalactiae A909
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2020-12-24
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7l72: Crystal structure of the second bromodomain (BD2) of human BRD3 bound to Ro3280
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-12-25
Authors: Karim, M.R., Bikowitz, M., Schonbrunn, E.
PDB entry 7l73: Crystal structure of the first bromodomain (BD1) of human BRDT bound to ERK5-IN-1
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2020-12-25
Authors: Chan, A., Karim, M.R., Schonbrunn, E.
PDB entry 7l74: Crystal structure of Beta-hexosyl transferase from Hamamotoa (Sporobolomyces) singularis bound to TRIS
Classification: TRANSFERASE
Source organism: Hamamotoa singularis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-12-25
Authors: Dagher, S.F., Edwards, B.F.P., Meilleur, F., Bruno-Barcena, J.M.
PDB entry 7l75: Crystal Structure of Peptidylprolyl Isomerase PrsA from Streptococcus mutans.
Classification: ISOMERASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2020-12-25
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Wawrzak, Z., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7l76: Crystal Structure of EcDsbA in a complex with 2-(6-Phenylbenzofuran-3-yl)acetic acid
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-12-26
Authors: Ilyichova, O.V., Scanlon, M.J.
PDB entry 7l77: Crystal structure of broadly HIV-1-neutralizing antibody VRC33.01
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.543 Å
Deposited: 2020-12-27
Authors: Zhou, T., Kwong, P.D.
PDB entry 7l78: H235C variant of Yeast Ferrochelatase
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-12-27
Authors: Lanzilotta, W.N., Medlock, A.E.
PDB entry 7l79: Crystal structure of broadly HIV-1-neutralizing antibody VRC40.01
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.826 Å
Deposited: 2020-12-27
Authors: Zhou, T., Kwong, P.D.
PDB entry 7l7a: Solution Structure of NuxVA
Classification: TOXIN
Source organism: Conus nux
Experimental method: SOLUTION NMR
Deposited: 2020-12-28
Authors: Mari, F., Dovell, S.
PDB entry 7l7b: Clostridioides difficile RNAP with fidaxomicin
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Clostridia bacterium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2020-12-28
Authors: Boyaci, H., Campbell, E.A., Darst, S.A., Chen, J.
PDB entry 7l7c: Crystal Structure of EcDsbA in a complex with 2-(6-(3-Methoxyphenyl)benzofuran-3-yl)acetic acid
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-12-28
Authors: Ilyichova, O.V., Scanlon, M.J.
PDB entry 7l7d: Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibody AZD8895
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-12-28
Authors: Dong, J., Crowe, J.E.
PDB entry 7l7e: Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibodies AZD8895 and AZD1061
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-12-28
Authors: Dong, J., Crowe, J.E.
PDB entry 7l7f: Cryo-EM structure of human ACE2 receptor bound to protein encoded by vaccine candidate BNT162b1
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2020-12-28
Authors: Lees, J.A., Han, S.
PDB entry 7l7g: Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens (updated model of PDB ID: 6CAJ)
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-12-28
Authors: Tsai, J.C., Miller-Vedam, L.E., Anand, A., Jaishankar, P., Nguyen, H.C., Wang, L., Renslo, A.R., Frost, A., Walter, P.
PDB entry 7l7h: Alpha-synuclein fibrils
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-12-28
Authors: Hojjatian, A., Dasari, A.
PDB entry 7l7i: Cryo-EM structure of Hsp90:FKBP51:p23 closed-state complex
Classification: ISOMERASE/CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-12-28
Authors: Lee, K., Thwin, A.C., Tse, E., Gates, S.N., Southworth, D.R.
PDB entry 7l7j: Cryo-EM structure of Hsp90:p23 closed-state complex
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-12-28
Authors: Lee, K., Thwin, A.C., Tse, E., Gates, S.N., Southworth, D.R.
PDB entry 7l7k: Cryo-EM structure of protein encoded by vaccine candidate BNT162b2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2020-12-28
Authors: Lees, J.A., Han, S.
PDB entry 7l7l: Crystal structure of HCV NS3/4A D168A protease in complex with NR01-129
Classification: HYDROLASE/INHIBITOR
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2020-12-29
Authors: Zephyr, J., Schiffer, C.A.
PDB entry 7l7n: Crystal structure of HCV NS3/4A D168A protease in complex with NR02-59
Classification: HYDROLASE/INHIBITOR
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2020-12-29
Authors: Zephyr, J., Schiffer, C.A.
PDB entry 7l7o: Crystal structure of HCV NS3/4A D168A protease in complex with NR04-49
Classification: HYDROLASE/INHIBITOR
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2020-12-29
Authors: Zephyr, J., Schiffer, C.A.
PDB entry 7l7p: Crystal structure of HCV NS3/4A D168A protease in complex with CH-24
Classification: HYDROLASE/INHIBITOR
Source organism: Hepacivirus C
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-12-29
Authors: Zephyr, J., Schiffer, C.A.
PDB entry 7l7q: Ctf3c with Ulp2-KIM
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-12-30
Authors: Hinshaw, S.M., Harrison, S.C.
PDB entry 7l7r: CCHFV Gc prefusion monomer bound to ADI-36121 and ADI-37801 Fabs
Classification: VIRAL PROTEIN
Source organism: Crimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-12-30
Authors: Mishra, A.K., McLellan, J.S.
PDB entry 7l7s: Human mitochondrial chaperonin mHsp60
Classification: CHAPERONE, ISOMERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-12-30
Authors: Chen, L., Wang, J.C.Y.
PDB entry 7l7t: BG505 SOSIP reconstructed from a designed nanoparticle, BG505 SOSIP-T33-31 (Component A)
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-12-30
Authors: Antanasijevic, A., Cannac, F., Sewall, L.M., Ward, A.B.
PDB entry 7l7u: BG505 SOSIP reconstructed from a designed nanoparticle, BG505 SOSIP-T33-31 (Component B)
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-12-30
Authors: Antanasijevic, A., Froes Rocha, R., Sewall, L.M., Ward, A.B.
PDB entry 7l7v: Crystal structure of Arabidopsis NRG1.1 CC-R domain K94E/K96E/R99E/K100E/R103E/K106E/K110E mutant
Classification: IMMUNE SYSTEM
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2020-12-30
Authors: Walton, W.G., Wan, L., Lietzan, A.D., Redinbo, M.R., Dangl, J.L.
PDB entry 7l7w: Crystal structure of Arabidopsis NRG1.1 CC-R domain K94E/K96E mutant
Classification: IMMUNE SYSTEM
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-12-30
Authors: Walton, W.G., Wan, L., Lietzan, A.D., Redinbo, M.R., Dangl, J.L.
PDB entry 7l7x: X-ray structure of the Pcryo_0638 aminotransferase from Psychrobacter cryohalolentis
Classification: TRANSFERASE
Source organism: Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-12-30
Authors: Linehan, M.P., Thoden, J.B., Holden, H.M.
PDB entry 7l7y: x-ray structure of the N-acetyltransferase Pcryo_0637 from psychrobacter cryohalolentis in the presence of UDP and acetyl-conezyme A
Classification: TRANSFERASE
Source organism: Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-12-30
Authors: Linehan, M.P., Thoden, J.B., Holden, H.M.
PDB entry 7l7z: x-ray structure of the N-acetyltransferase Pcryo_0637 from psychrobacter cryohalolentis in the presence of coenzyme A and UDP-di-N-acetyl-bacillosamine
Classification: TRANSFERASE
Source organism: Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-12-30
Authors: Linehan, M.P., Thoden, J.B., Holden, H.M.
PDB entry 7l81: x-ray structure of the psychrobacter cryohalolentis N-acetyltransferase Pcryo_0637 in the presence of coenzyme A and
Classification: TRANSFERASE
Source organism: Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-12-30
Authors: Linehan, M.P., Thoden, J.B., Holden, H.M.
PDB entry 7l82: x-ray structure of the psychrobacter cryohalolentis Pcryo_0637 N-acetyltransferase in the presene of its reaction tetrahedral intermediate
Classification: TRANSFERASE
Source organism: Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-12-30
Authors: Linehan, M.P., Thoden, J.B., Holden, H.M.
PDB entry 7l83: NMR solution structure of Nav1.5 DIV S3b-S4a paddle motif in DPC micelle
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-12-30
Authors: Hussein, A.K., Bhuiyan, M.H., Arshava, B., Zhuang, J., Poget, S.F.
PDB entry 7l84: Hen Egg White Lysozyme by Native S-SAD at Room Temperature
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-12-30
Authors: Greisman, J.B., Dalton, K.M., Hekstra, D.R.
PDB entry 7l85: Designed tetrahedral nanoparticle T33-31 presenting BG505 SOSIP trimers
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Ward, A.B.
PDB entry 7l86: BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-1 from animal Rh.32034 (Wk26 time point)
Classification: VIRAL PROTEIN/Immune System
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Ward, A.B.
PDB entry 7l87: BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-2 from animal Rh.32034 (Wk26 time point)
Classification: VIRAL PROTEIN/Immune System
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Yang, Y.R., Perrett, H.R., Ward, A.B.
PDB entry 7l88: BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-3 from animal Rh.32034 (Wk26 time point)
Classification: VIRAL PROTEIN/Immune System
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Cannac, F., Perrett, H.R., Ward, A.B.
PDB entry 7l89: BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-4 from animal Rh.32034 (Wk26 time point)
Classification: VIRAL PROTEIN/Immune System
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Rantalainen, K., Perrett, H.R., Ward, A.B.
PDB entry 7l8a: BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-1 from animal Rh.33104 (Wk26 time point)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Torrents de la Pena, A., Ward, A.B.
PDB entry 7l8b: BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-2 from animal Rh.33104 (Wk26 time point)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Yang, Y.R., Perrett, H.R., Ward, A.B.
PDB entry 7l8c: BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-3 from animal Rh.33104 (Wk26 time point)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Perrett, H.R., Ward, A.B.
PDB entry 7l8d: BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-4 from animal Rh.33104 (Wk26 time point)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Ward, A.B.
PDB entry 7l8e: BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-1 from animal Rh.33172 (Wk38 time point)
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Ward, A.B.
PDB entry 7l8f: BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-2 from animal Rh.33172 (Wk38 time point)
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Ward, A.B.
PDB entry 7l8g: BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-3 from animal Rh.33172 (Wk38 time point)
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Rantalainen, K., Ward, A.B.
PDB entry 7l8h: EV68 3C protease (3Cpro) in Complex with Rupintrivir
Classification: HYDROLASE/INHIBITOR
Source organism: Human enterovirus D68
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-12-31
Authors: Lockbaum, G.J., Henes, M., Lee, J.M., Timm, J., Nalivaika, E.A., Yilmaz, N.K., Thompson, P.R., Schiffer, C.A.
PDB entry 7l8i: SARS-CoV-2 Main Protease (Mpro) in Complex with Rupintrivir (P21)
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-12-31
Authors: Lockbaum, G.J., Henes, M., Lee, J.M., Timm, J., Nalivaika, E.A., Yilmaz, N.K., Thompson, P.R., Schiffer, C.A.
PDB entry 7l8j: SARS-CoV-2 Main Protease (Mpro) in Complex with Rupintrivir (P21212)
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2020-12-31
Authors: Lockbaum, G.J., Henes, M., Lee, J.M., Timm, J., Nalivaika, E.A., Yilmaz, N.K., Thompson, P.R., Schiffer, C.A.
PDB entry 7l8k: Crystal structure of human GPX4-U46C
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2020-12-31
Authors: Forouhar, F., Liu, H., Seibt, T., Saneto, R., Wigby, K., Friedman, J., Xia, X., Shchepinov, M.S., Ramesh, S., Conrad, M., Stockwell, B.R.
PDB entry 7l8l: Crystal structure of human R152H GPX4-U46C
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2020-12-31
Authors: Forouhar, F., Liu, H., Seibt, T., Saneto, R., Wigby, K., Friedman, J., Xia, X., Shchepinov, M.S., Ramesh, S., Conrad, M., Stockwell, B.R.
PDB entry 7l8m: Crystal structure of human GPX4-U46C mutant K48L
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2020-12-31
Authors: Forouhar, F., Liu, H., Seibt, T., Saneto, R., Friedman, J., Xia, X., Shchepinov, M.S., Ramesh, S., Conrad, M., Stockwell, B.R.
PDB entry 7l8n: Diadenylate cyclase with AMP from Streptococcus mutans
Classification: TRANSFERASE
Source organism: Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2020-12-31
Authors: Hua, Z., Hui, W.
PDB entry 7l8o: OXA-48 bound by Compound 4.3
Classification: HYDROLASE/INHIBITOR
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-12-31
Authors: Taylor, D.M., Hu, L., Prasad, B.V.V., Palzkill, T.
PDB entry 7l8p: Integrin alphaIIbbeta3 in complex with sibrafiban
Classification: CELL ADHESION
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34995 Å
Deposited: 2020-12-31
Authors: Lin, F.-Y., Springer, T.A.
PDB entry 7l8q: Crystal structure of human GPX4-U46C with oxidized Cys-46
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2020-12-31
Authors: Forouhar, F., Liu, H., Seibt, T., Saneto, R., Wigby, K., Friedman, J., Xia, X., Shchepinov, M.S., Ramesh, S., Conrad, M., Stockwell, B.R.
PDB entry 7l8r: Crystal structure of human GPX4-U46C mutant K48A
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2020-12-31
Authors: Forouhar, F., Liu, H., Seibt, T., Saneto, R., Wigby, K., Friedman, J., Xia, X., Shchepinov, M.S., Ramesh, S., Conrad, M., Stockwell, B.R.
PDB entry 7l8s: BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-4 from animal Rh.33172 (Wk38 time point)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Ward, A.B.
PDB entry 7l8t: BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-1 from animal Rh.33311 (Wk26 time point)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-12-31
Authors: Antanasijevic, A., Sewall, L.M., Ward, A.B.
PDB entry 7l8u: BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-2 from animal Rh.33311 (Wk26 time point)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2021-01-01
Authors: Antanasijevic, A., Sewall, L.M., Rantalainen, K., Ward, A.B.
PDB entry 7l8v: NMR Structure of half-calcified calmodulin mutant (CaMEF12) bound to the IQ-motif of CaV1.2
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-01-01
Authors: Ames, J.B.
PDB entry 7l8w: BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-3 from animal Rh.33311 (Wk26 time point)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-01-01
Authors: Antanasijevic, A., Sewall, L.M., Ward, A.B.
PDB entry 7l8x: BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-4 from animal Rh.33311 (Wk26 time point)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-01-01
Authors: Antanasijevic, A., Sewall, L.M., Yang, Y.R., Ward, A.B.
PDB entry 7l8y: BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-5 from animal Rh.33311 (Wk26 time point)
Classification: VIRAL PROTEIN/Immune System
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2021-01-01
Authors: Antanasijevic, A., Sewall, L.M., Cannac, F., Ward, A.B.
PDB entry 7l8z: BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-7 from animal Rh.33311 (Wk26 time point)
Classification: VIRAL PROTEIN/Immune system
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-01-01
Authors: Antanasijevic, A., Sewall, L.M., Perrett, H.R., Ward, A.B.
PDB entry 7l90: BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-8 from animal Rh.33311 (Wk26 time point)
Classification: VIRAL PROTEIN/Immune System
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2021-01-01
Authors: Antanasijevic, A., Sewall, L.M., Ward, A.B.
PDB entry 7l91: Structure of Metallo Beta-Lactamase L1 in a Complex with Hydrolyzed Moxalactam Determined by Pink-Beam Serial Crystallography
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-01-01
Authors: Wilamowski, M., Kim, Y., Sherrell, D.A., Lavens, A., Henning, R., Maltseva, N., Endres, M., Babnigg, G., Vukica, S., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7l92: C1B domain of Protein kinase C in complex with diacylglycerol and dodecyl 2-(trimethylammonio)ethyl phosphate
Classification: LIPID BINDING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-01-01
Authors: Katti, S.S., Krieger, I.V.
PDB entry 7l96: Connecting hydrophobic surfaces in cyclic peptides increases membrane permeability
Classification: PEPTIDE BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2021-01-02
Authors: Hoang, H.N.
PDB entry 7l97: Crystal structure of STAMBPL1 in complex with an engineered binder
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2021-01-02
Authors: Guo, Y., Dong, A., Hou, F., Li, Y., Zhang, W., Arrowsmith, C.H., Edwards, A.M., Tong, Y., Structural Genomics Consortium (SGC)
PDB entry 7l98: Connecting hydrophobic surfaces in cyclic peptides increases membrane permeability
Classification: PEPTIDE BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2021-01-03
Authors: Hoang, H.N.
PDB entry 7l99: Crystal structure of BRDT bromodomain 2 in complex with CDD-1302
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-01-03
Authors: Sharma, R., Yu, Z., Ku, A.F., Anglin, J.L., Ucisik, M.N., Faver, J.C., Sankaran, B., Kim, C., Matzuk, M.M.
PDB entry 7l9a: Crystal structure of BRDT bromodomain 2 in complex with CDD-1102
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2021-01-03
Authors: Sharma, R., Kaur, G., Yu, Z., Ku, A.F., Anglin, J.L., Ucisik, M.N., Faver, J.C., Sankaran, B., Kim, C., Matzuk, M.M.
PDB entry 7l9c: Receiver Domain of RssB
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-01-03
Authors: Deaconescu, A.M., Son, J., Schwartz, J.
PDB entry 7l9d: Connecting hydrophobic surfaces in cyclic peptides increases membrane permeability
Classification: PEPTIDE BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2021-01-03
Authors: Hoang, H.N.
PDB entry 7l9e: Crystal structure of apo-alpha glucosidase
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2021-01-03
Authors: Karade, S.S., Mariuzza, R.A.
PDB entry 7l9f: Crystal structure of human ARH3 bound to calcium and ADP-ribose
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-01-04
Authors: Pourfarjam, Y., Kurinov, I., Moss, J., Kim, I.K.
PDB entry 7l9g: Crystal structure of the second bromodomain (BD2) of human BRD2 bound to BI2536
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2021-01-04
Authors: Karim, M.R., Bikowitz, M.J., Schonbrunn, E.
PDB entry 7l9h: Crystal structure of human ARH3-D77A bound to magnesium and ADP-ribose
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-01-04
Authors: Pourfarjam, Y., Kurinov, I., Moss, J., Kim, I.K.
PDB entry 7l9i: Crystal structure of human ARH3-D314A bound to magnesium and ADP-ribose
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-01-04
Authors: Pourfarjam, Y., Kurinov, I., Moss, J., Kim, I.K.
PDB entry 7l9j: Crystal structure of the second bromodomain (BD2) of human BRD2 bound to Ro3280
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-01-04
Authors: Karim, M.R., Bikowitz, M.J., Schonbrunn, E.
PDB entry 7l9k: Crystal structure of the second bromodomain (BD2) of human BRD2 bound to LRRK2-IN-1
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-01-04
Authors: Karim, M.R., Bikowitz, M.J., Schonbrunn, E.
PDB entry 7l9l: Crystal structure of the second bromodomain (BD2) of human BRD3 bound to BI2536
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-01-04
Authors: Karim, M.R., Bikowitz, M.J., Schonbrunn, E.
PDB entry 7l9m: Crystal structure of the first bromodomain (BD1) of human BRD4 in complex with bivalent inhibitor GXH-II-083
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-01-04
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7l9p: Structure of human SHLD2-SHLD3-REV7-TRIP13(E253Q) complex
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-01-04
Authors: Xie, W., Patel, D.J.
PDB entry 7l9q: Wild-type Pseudomonas fluorescens isocyanide hydratase (WT-1) at 274K, Refmac5-refined
Classification: LYASE
Source organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.149 Å
Deposited: 2021-01-04
Authors: Su, Z., Dasgupta, M., Poitevin, F., Mathews, I.I., van den Bedem, H., Wall, M.E., Yoon, C.H., Wilson, M.A.
PDB entry 7l9r: Crystal Structure of a putative deoxyhypusine synthase from Entamoeba histolytica
Classification: TRANSFERASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-01-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7l9s: Wild-type Pseudomonas fluorescens isocyanide hydratase (WT-2) at 274K, Refmac5-refined
Classification: LYASE
Source organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2021-01-04
Authors: Su, Z., Dasgupta, M., Poitevin, F., Mathews, I.I., van den Bedem, H., Wall, M.E., Yoon, C.H., Wilson, M.A.
PDB entry 7l9t: Crystal Structure of Dihydrofolate reductase from Mycolicibacterium smegmatis in complex with SDDC-0001565 inhibitor
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-01-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7l9u: Crystal Structure of S-adenosylmethionine-dependent methyltransferase UmaA from Mycobacterium tuberculosis in complex with a 12-mer PEG
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-01-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7l9w: Wild-type Pseudomonas fluorescens isocyanide hydratase (WT-3) at 274K, Refmac5-refined
Classification: LYASE
Source organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.199 Å
Deposited: 2021-01-05
Authors: Su, Z., Dasgupta, M., Poitevin, F., Mathews, I.I., van den Bedem, H., Wall, M.E., Yoon, C.H., Wilson, M.A.
PDB entry 7l9x: Structure of VPS4B in complex with an allele-specific covalent inhibitor
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2021-01-05
Authors: Grasso, M., Cupido, T., Kapoor, T.M.
PDB entry 7l9y: Human PARP14 (ARTD8), catalytic fragment in complex with RBN012042
Classification: TRANSFERASE/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-01-05
Authors: Dorsey, B.W., Swinger, K.K., Schenkel, L.B., Church, W.D., Perl, N.R., Vasbinder, M.M., Wigle, T.J., Kuntz, K.W.
PDB entry 7l9z: Pseudomonas fluorescens G150A isocyanide hydratase (G150A-1) at 274K, Refmac5-refined
Classification: LYASE
Source organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-01-05
Authors: Su, Z., Dasgupta, M., Poitevin, F., Mathews, I.I., van den Bedem, H., Wall, M.E., Yoon, C.H., Wilson, M.A.
PDB entry 7la0: Pseudomonas fluorescens G150A isocyanide hydratase (G150A-2) at 274K, Refmac5-refined
Classification: LYASE
Source organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-01-05
Authors: Su, Z., Dasgupta, M., Poitevin, F., Mathews, I.I., van den Bedem, H., Wall, M.E., Yoon, C.H., Wilson, M.A.
PDB entry 7la1: Crystal structure of phosphoglycerate kinase from Mycobacterium avium
Classification: TRANSFERASE
Source organism: Mycobacterium avium (strain 104)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-05
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7la3: Pseudomonas fluorescens G150A isocyanide hydratase (G150A-3) at 274K, Refmac5-refined
Classification: LYASE
Source organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.349 Å
Deposited: 2021-01-05
Authors: Su, Z., Dasgupta, M., Poitevin, F., Mathews, I.I., van den Bedem, H., Wall, M.E., Yoon, C.H., Wilson, M.A.
PDB entry 7la4: Integrin AlphaIIbBeta3-PT25-2 Complex
Classification: CELL ADHESION
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-01-05
Authors: Bush, M.W., Walz, T., Coller, B., Filizola, M., Spasic, A., Nesic, D., Li, J.
PDB entry 7la5: Structure of human GGT1 in complex with Lnt1-172 compound.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2021-01-05
Authors: Terzyan, S.S., Hanigan, M., Nguen, L.
PDB entry 7la6: THE STRUCTURE OF A SENSOR DOMAIN OF A HISTIDINE KINASE (VxrA) FROM VIBRIO CHOLERAE O1 BIOVAR ELTOR STR. N16961, N239 deletion mutant
Classification: SIGNALING PROTEIN
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-01-05
Authors: Tan, K., Wu, R., Jedrzejczak, R., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7la7: O6 variable lymphocyte receptor ectodomain
Classification: IMMUNE SYSTEM
Source organism: Petromyzon marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55101 Å
Deposited: 2021-01-06
Authors: Bernard, S.M., Wilson, I.A.
PDB entry 7la8: O6 variable lymphocyte receptor ectodomain bound to 3-HSO3-Gal-4GlcNAc
Classification: IMMUNE SYSTEM/IMMUNOGEN
Source organism: Petromyzon marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8965 Å
Deposited: 2021-01-06
Authors: Bernard, S.M., Wilson, I.A.
PDB entry 7la9: Crystal structure of the first bromodomain (BD1) of human BRD4 (BRD4-1) in complex with bivalent inhibitor NC-III-49-1
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-01-06
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7laa: Structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1041
Classification: VIRAL PROTEIN, IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2021-01-06
Authors: Manne, K., Acharya, P.
PDB entry 7lab: Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052
Classification: VIRAL PROTEIN, IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2021-01-06
Authors: Manne, K., Acharya, P.
PDB entry 7lad: Clobetasol propionate bound to CYP3A5
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2021-01-06
Authors: Buchman, C.D., Miller, D., Wang, J., Jayaraman, S., Chen, T.
PDB entry 7lae: CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH Compound-4
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2021-01-06
Authors: Khan, J.A.
PDB entry 7laf: 15-lipoxygenase-2 loop mutant bound to imidazole-based inhibitor
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2021-01-06
Authors: Newcomer, M.E., Gilbert, N.C., Neau, D.B.
PDB entry 7lag: CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH Compound-14 AKA 7-({1-[(3-phenoxyphenyl)methyl]-1H-pyrazol-4-yl}methyl)-3H-[1,2,3]triazolo[4,5-b]pyridin-5-amine
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-01-06
Authors: Khan, J.A.
PDB entry 7lah: Crystal structure of the first bromodomain (BD1) of human BRD2 bound to bromosporine
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-06
Authors: Karim, M.R., Bikowitz, M., Schonbrunn, E.
PDB entry 7lai: Crystal structure of the first bromodomain (BD1) of human BRD2 bound to BI2536
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-01-06
Authors: Karim, M.R., Bikowitz, M., Schonbrunn, E.
PDB entry 7laj: Crystal structure of the first bromodomain (BD1) of human BRD2 bound to Ro3280
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.854 Å
Deposited: 2021-01-06
Authors: Karim, M.R., Bikowitz, M., Chan, A., Schonbrunn, E.
PDB entry 7lak: Crystal structure of the first bromodomain (BD1) of human BRD2 bound to volasertib
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.831 Å
Deposited: 2021-01-06
Authors: Karim, M.R., Bikowitz, M., Chan, A., Schonbrunn, E.
PDB entry 7lal: CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH COMPOUND-18 AKA 7-(3-(2,3-DIHYDRO-1H-INDEN-1-YLAMINO)-1-PHENYLPROPYL)-1H-[1,2,3]TRIAZOLO[4,5-B]PYRIDIN-5-AMINE
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2021-01-06
Authors: Khan, J.A.
PDB entry 7lam: Crystal structure of Campylobacter jejuni Cj0843c lytic transglycosylase in complex with N,N',N''-triacetylchitotriose
Classification: LYASE/LYASE INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2021-01-06
Authors: van den Akker, F., Kumar, V.
PDB entry 7lan: CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH COMPOUND-30 AKA 7-[(3~{S},4~{R},6~{R})-4-benzyl-2-oxa-7,13,14-triazatetracyclo[14.3.1.1^{3,6}.1^{11,14}]docosa-1(19),11(21),12,16(20),17-pentaen-10-yl]-3~{H}-triazolo[4,5-b]pyridin-5-amine
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2021-01-06
Authors: Khan, J.A.
PDB entry 7lao: Crystal structure of aminoglycoside acetyltransferase AAC(3)-IIb
Classification: TRANSFERASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2021-01-06
Authors: Stogios, P.J., Evdokimova, E., Osipiuk, J., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7lap: Crystal structure of aminoglycoside acetyltransferase AAC(3)-Xa
Classification: TRANSFERASE
Source organism: Streptomyces griseus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2021-01-06
Authors: Stogios, P.J., Skarina, T., Kim, Y., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7laq: Crystal structure of Campylobacter jejuni Cj0843c lytic transglycosylase in complex with N,N'-diacetylchitobiose
Classification: LYASE/LYASE INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2021-01-06
Authors: van den Akker, F., Kumar, V.
PDB entry 7lar: Cryo-EM structure of PCV2 Replicase bound to ssDNA
Classification: REPLICATION, HYDROLASE/DNA
Source organism: Porcine circovirus 2; unidentified
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-01-06
Authors: Khayat, R.
PDB entry 7las: Cryo-EM structure of PCV2 Replicase bound to ssDNA
Classification: REPLICATION, HYDROLASE/DNA
Source organism: Escherichia coli; Porcine circovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2021-01-06
Authors: Khayat, R.
PDB entry 7lat: Campylobacter jejuni keto-acid reductoisomerase in complex with Mg2+
Classification: ISOMERASE
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2021-01-06
Authors: Guddat, L.W.
PDB entry 7lau: Crystal structure of the first bromodomain (BD1) of human BRD2 bound to ERK5-IN-1
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-01-06
Authors: Karim, M.R., Bikowitz, M., Schonbrunn, E.
PDB entry 7lav: Pseudomonas fluorescens G150T isocyanide hydratase (G150T-1) at 274K, Refmac5-refined
Classification: LYASE
Source organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.149 Å
Deposited: 2021-01-06
Authors: Su, Z., Dasgupta, M., Poitevin, F., Mathews, I.I., van den Bedem, H., Wall, M.E., Yoon, C.H., Wilson, M.A.
PDB entry 7law: crystal structure of GITR complex with GITR-L
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.752 Å
Deposited: 2021-01-07
Authors: Longenecker, K.L., Rogers, B., Bigelow, L., Judge, R.A., Alvarez, H.
PDB entry 7lax: Pseudomonas fluorescens G150T isocyanide hydratase (G150T-2) at 274K, Refmac5-refined
Classification: LYASE
Source organism: Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.198 Å
Deposited: 2021-01-07
Authors: Su, Z., Dasgupta, M., Poitevin, F., Mathews, I.I., van den Bedem, H., Wall, M.E., Yoon, C.H., Wilson, M.A.
PDB entry 7lay: Crystal structure of the first bromodomain (BD1) of human BRD3 bound to SG3-179
Classification: GENE REGULATION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-01-07
Authors: Karim, M.R., Bikowitz, M.J., Schonbrunn, E.