LiteFold/PDB huggingface dataset:
PDB entry 3fjl: Human dihydroorotate dehydrogenase in complex with a leflunomide derivative inhibitor 3
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-14
Authors: Heikkila, T.
PDB entry 3fjm: crystal structure of phosphate bound PEB3
Classification: TRANSPORT PROTEIN
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-12-14
Authors: Min, T., Matte, A., Cygler, M.
PDB entry 3fjn: The crystal structure of 17-alpha hydroxysteroid dehydrogenase Y224D mutant.
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-14
Authors: Dhagat, U., El-Kabbani, O.
PDB entry 3fjo: Structure of chimeric YH CPR
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-15
Authors: Morera, S., Aigrain, L., Truan, G.
PDB entry 3fjp: Apo structure of Biotin protein ligase from Aquifex aeolicus
Classification: LIGASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-15
Authors: McNae, I.W., Tron, C.M., Baxter, R.L., Walkinshaw, M.D., Campopiano, D.J.
PDB entry 3fjq: Crystal structure of cAMP-dependent protein kinase catalytic subunit alpha in complex with peptide inhibitor PKI alpha (6-25)
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-12-15
Authors: Kim, C.
PDB entry 3fjs: CRYSTAL STRUCTURE OF A PUTATIVE BIOSYNTHETIC PROTEIN WITH RMLC-LIKE CUPIN FOLD (REUT_B4087) FROM RALSTONIA EUTROPHA JMP134 AT 1.90 A RESOLUTION
Classification: BIOSYNTHETIC PROTEIN
Source organism: Ralstonia eutropha JMP134
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-15
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3fjt: Crystal structure of a human Fc fragment engineered for extended serum half-life
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-15
Authors: Oganesyan, V., Wu, H., Dall'Acqua, W.F.
PDB entry 3fju: Ascaris suum carboxypeptidase inhibitor in complex with human carboxypeptidase A1
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Ascaris suum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-12-15
Authors: Sanglas, L., Aviles, F.X., Huber, R., Gomis-Ruth, F.X., Arolas, J.L.
PDB entry 3fjv: Crystal structure of novel protein of unknown function (YP_111841.1) from BURKHOLDERIA PSEUDOMALLEI K96243 at 1.90 A resolution
Classification: structural genomics, unknown function
Source organism: Burkholderia pseudomallei K96243
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-15
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3fjw: Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii
Classification: OXIDOREDUCTASE
Source organism: Pleurotus eryngii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-12-15
Authors: Piontek, K., Martinez, A.T., Choinowski, T., Plattner, D.A.
PDB entry 3fjx: E. coli EPSP synthase (T97I) liganded with S3P
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-12-15
Authors: Schonbrunn, E.
PDB entry 3fjy: Crystal structure of a probable MutT1 protein from Bifidobacterium adolescentis
Classification: HYDROLASE
Source organism: Bifidobacterium adolescentis ATCC 15703
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-12-15
Authors: Palani, K., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fjz: E. coli EPSP synthase (T97I) liganded with S3P and glyphosate
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-15
Authors: Schonbrunn, E.
PDB entry 3fk0: E. coli EPSP synthase (TIPS mutation) liganded with S3P
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-15
Authors: Schonbrunn, E.
PDB entry 3fk1: E. coli EPSP synthase (TIPS mutation) liganded with S3P and glyphosate
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-15
Authors: Schonbrunn, E.
PDB entry 3fk2: Crystal structure of the RhoGAP domain of human glucocorticoid receptor DNA-binding factor 1
Classification: SIGNALING PROTEIN, HYDROLASE ACTIVATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-12-15
Authors: Nedyalkova, L., Tong, Y., Tempel, W., Loppnau, P., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3fk3: Structure of the Yeats Domain, Yaf9
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-15
Authors: Wang, A.Y., Schulze, J.M., Skordalakes, E., Berger, J.M., Rine, J., Kobor, M.S.
PDB entry 3fk4: Crystal structure of RuBisCO-like protein from Bacillus Cereus ATCC 14579
Classification: ISOMERASE
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-15
Authors: Fedorov, A.A., Fedorov, E.V., Imker, H.J., Burley, S.K., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fk5: Crystal structure of 3-oxoacyl-(acyl carrier protein) synthase III, FabH (Xoo4209) from Xanthomonas oryzae pv. oryzae KACC10331
Classification: TRANSFERASE
Source organism: Xanthomonas oryzae pv. oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-12-16
Authors: Natarajan, S., Huynh, K.-H., Kang, L.W.
PDB entry 3fk6: Crystal structure of TetR triple mutant (H64K, S135L, S138I)
Classification: TRANSCRIPTION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-12-16
Authors: Klieber, M.A., Scholz, O., Lochner, S., Gmeiner, P., Hillen, W., Muller, Y.A.
PDB entry 3fk7: Crystal structure of TetR triple mutant (H64K, S135L, S138I) in complex with 4-ddma-atc
Classification: TRANSCRIPTION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2008-12-16
Authors: Klieber, M.A., Scholz, O., Lochner, S., Gmeiner, P., Hillen, W., Muller, Y.A.
PDB entry 3fk8: The crystal structure of disulphide isomerase from Xylella fastidiosa Temecula1
Classification: ISOMERASE
Source organism: Xylella fastidiosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-12-16
Authors: Tan, K., Sather, A., Shackelford, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3fk9: Crystal structure of mMutator MutT protein from Bacillus halodurans
Classification: HYDROLASE
Source organism: Bacillus halodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-16
Authors: Bonanno, J.B., Freeman, J., Bain, K.T., Hu, S., Romero, R., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fka: CRYSTAL STRUCTURE OF A NTF-2 LIKE PROTEIN OF UNKNOWN FUNCTION (SPO1084) FROM SILICIBACTER POMEROYI DSS-3 AT 1.69 A RESOLUTION
Classification: UNKNOWN FUNCTION
Source organism: Silicibacter pomeroyi DSS-3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2008-12-16
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3fkb: Structure of NDPK H122G and tenofovir-diphosphate
Classification: TRANSFERASE
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-12-16
Authors: Morera, S., Chen, Y.X.
PDB entry 3fkc: Crystal Structure of Human Zinc finger and BTB domain containing 33
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-16
Authors: Filippakopoulos, P., Bullock, A., Keates, T., Burgess-Brown, N., Muniz, J., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3fkd: The crystal structure of L-threonine-O-3-phosphate decarboxylase from Porphyromonas gingivalis
Classification: LYASE
Source organism: Porphyromonas gingivalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-16
Authors: Zhang, Z., Eswaramoorthy, S., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fke: Structure of the Ebola VP35 Interferon Inhibitory Domain
Classification: RNA BINDING PROTEIN
Source organism: Zaire ebolavirus - Mayinga (Zaire, 1976)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-12-16
Authors: Amarasinghe, G.K., Leung, D.W., Ginder, N.D., Honzatko, R.B., Nix, J., Basler, C.F., Fulton, D.B.
PDB entry 3fkf: thiol-disulfide oxidoreductase from Bacteroides fragilis NCTC 9343
Classification: OXIDOREDUCTASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-12-16
Authors: Duke, N.E.C., Freeman, L., Tesar, C., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3fkg: Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii
Classification: OXIDOREDUCTASE
Source organism: Pleurotus eryngii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2008-12-16
Authors: Piontek, K., Martinez, A.T., Choinowski, T., Plattner, D.A.
PDB entry 3fkh: Crystal structure of Putative pyridoxamine 5'-phosphate oxidase (NP_601736.1) from CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO at 2.51 A resolution
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2008-12-16
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3fki: 12-Subunit RNA Polymerase II Refined with Zn-SAD data
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.88 Å
Deposited: 2008-12-16
Authors: Meyer, P.A., Ye, P., Suh, M.H., Zhang, M., Fu, J.
PDB entry 3fkj: Crystal structure of a putative phosphosugar isomerase (stm_0572) from salmonella typhimurium lt2 at 2.12 A resolution
Classification: ISOMERASE
Source organism: Salmonella typhimurium LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2008-12-16
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3fkk: Structure of L-2-keto-3-deoxyarabonate dehydratase
Classification: LYASE
Source organism: Azospirillum brasilense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-12-17
Authors: Shimada, N., Mikami, B.
PDB entry 3fkl: P38 kinase crystal structure in complex with RO9552
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-17
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fkn: P38 kinase crystal structure in complex with RO7125
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-17
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fko: P38 kinase crystal structure in complex with RO3668
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-17
Authors: Kuglstatter, A., Knapp, M.
PDB entry 3fkq: Crystal structure of NtrC-like two-domain protein (RER070207001320) from Eubacterium rectale at 2.10 A resolution
Classification: structural genomics, unknown function
Source organism: Eubacterium rectale
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-12-17
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3fkr: Structure of L-2-keto-3-deoxyarabonate dehydratase complex with pyruvate
Classification: LYASE
Source organism: Azospirillum brasilense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2008-12-17
Authors: Shimada, N., Mikami, B.
PDB entry 3fks: Yeast F1 ATPase in the absence of bound nucleotides
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.587 Å
Deposited: 2008-12-17
Authors: Kabaleeswaran, V., Symersky, J., Shen, H., Walker, J.E., Leslie, A.G.W., Mueller, D.M.
PDB entry 3fkt: Crystal Structure of Human Beta Secretase Complexed with Spiropiperdine Iminohydantoin Inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-17
Authors: Munshi, S.
PDB entry 3fku: Crystal structure of influenza hemagglutinin (H5) in complex with a broadly neutralizing antibody F10
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Viet Nam/1203/2004(H5N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-12-17
Authors: Hwang, W.C., Santelli, E., Stec, B., Wei, G., Cadwell, G., Bankston, L.A., Sui, J., Perez, S., Aird, D., Chen, L.M., Ali, M., Murakami, A., Yammanuru, A., Han, T., Cox, N., Donis, R.O., Liddington, R.C., Marasco, W.A.
PDB entry 3fkv: AmpC K67R mutant complexed with benzo(b)thiophene-2-boronic acid (bzb)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.847 Å
Deposited: 2008-12-17
Authors: Chen, Y., McReynolds, A., Shoichet, B.K.
PDB entry 3fkw: AmpC K67R mutant apo structure
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.498 Å
Deposited: 2008-12-17
Authors: Chen, Y., McReynolds, A., Shoichet, B.K.
PDB entry 3fky: Crystal structure of the glutamine synthetase Gln1deltaN18 from the yeast Saccharomyces cerevisiae
Classification: LIGASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-12-18
Authors: He, Y.X., Gui, L., Liu, Y.Z., Du, Y., Zhou, Y.Y., Li, P., Zhou, C.Z.
PDB entry 3fkz: X-ray structure of the non covalent swapped form of the S16G/T17N/A19P/A20S/K31C/S32C mutant of bovine pancreatic ribonuclease
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2008-12-18
Authors: Merlino, A., Russo Krauss, I., Perillo, M., Mattia, C.A., Ercole, C., Picone, D., Vergara, A., Sica, F.
PDB entry 3fl0: X-ray structure of the non covalent swapped form of the Q28L/K31C/S32C mutant of bovine pancreatic ribonuclease in complex with 2'-DEOXYCYTIDINE-2'-DEOXYGUANOSINE-3',5'-MONOPHOSPHATE
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2008-12-18
Authors: Merlino, A., Russo Krauss, I., Perillo, M., Mattia, C.A., Ercole, C., Picone, D., Vergara, A., Sica, F.
PDB entry 3fl1: X-ray structure of the non covalent swapped form of the A19P/Q28L/K31C/S32C mutant of bovine pancreatic ribonuclease in complex with 2'-DEOXYCYTIDINE-2'-DEOXYGUANOSINE-3',5'-MONOPHOSPHATE
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-18
Authors: Merlino, A., Russo Krauss, I., Perillo, M., Mattia, C.A., Ercole, C., Picone, D., Vergara, A., Sica, F.
PDB entry 3fl2: Crystal structure of the ring domain of the E3 ubiquitin-protein ligase UHRF1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-12-18
Authors: Walker, J.R., Avvakumov, G.V., Xue, S., Li, Y., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 3fl3: X-ray structure of the ligand free non covalent swapped form of the A19P/Q28L/K31C/S32C mutant of bovine pancreatic ribonuclease
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-12-18
Authors: Merlino, A., Russo Krauss, I., Perillo, M., Mattia, C.A., Ercole, C., Picone, D., Vergara, A., Sica, F.
PDB entry 3fl4: P38 kinase crystal structure in complex with RO5634
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-18
Authors: Kuglstatter, A., Knapp, M.
PDB entry 3fl5: Protein kinase CK2 in complex with the inhibitor Quinalizarin
Classification: TRANSFERASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-18
Authors: Mazzorana, M., Franchin, C., Battistutta, R.
PDB entry 3fl6: Influence of the incorporation of a cyclohexenyl nucleic acid (CeNA) residue onto the sequence d(GCGTGCG)/d(CGCACGC)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2008-12-18
Authors: Robeyns, K., Herdewijn, P., Van Meervelt, L.
PDB entry 3fl7: Crystal structure of the human ephrin A2 ectodomain
Classification: TRANSFERASE, SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-18
Authors: Walker, J.R., Yermekbayeva, L., Seitova, A., Butler-Cole, C., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 3fl8: Crystal structure of B. anthracis dihydrofolate reductase (DHFR) with RAB1, a TMP-dihydrophthalazine derivative
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2881 Å
Deposited: 2008-12-18
Authors: Bourne, C.R., Barrow, W.W.
PDB entry 3fl9: Crystal structure of B. anthracis dihydrofolate reductase (DHFR) with trimethoprim
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-12-18
Authors: Bourne, C.R., Barrow, W.W.
PDB entry 3fla: RifR - Type II thioesterase from Rifamycin NRPS/PKS biosynthetic pathway - Form 1
Classification: HYDROLASE
Source organism: Amycolatopsis mediterranei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-18
Authors: Smith, J.L., Akey, D.L.
PDB entry 3flb: RifR - Type II thioesterase from Rifamycin NRPS/PKS biosynthetic pathway - Form 2
Classification: HYDROLASE
Source organism: Amycolatopsis mediterranei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-18
Authors: Smith, J.L., Akey, D.L.
PDB entry 3flc: Crystal structure of the His-tagged H232R mutant of glycerol kinase from Enterococcus casseliflavus with glycerol
Classification: TRANSFERASE
Source organism: Enterococcus casseliflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-12-18
Authors: Briozzo, P.
PDB entry 3fld: Crystal structure of the trai c-terminal domain
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-12-18
Authors: Guogas, L.M., Kennedy, S.A., Redinbo, M.R.
PDB entry 3fle: SE_1780 protein of unknown function from Staphylococcus epidermidis.
Classification: structural genomics, unknown function
Source organism: Staphylococcus epidermidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.009 Å
Deposited: 2008-12-18
Authors: Osipiuk, J., Hatzos, C., Clancy, S., Kim, Y., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3flf: Thermolysin inhibition
Classification: HYDROLASE
Source organism: Bacillus thermoproteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2008-12-18
Authors: Englert, L., Biela, A., Heine, A., Klebe, G.
PDB entry 3flg: The PWWP domain of Human DNA (cytosine-5-)-methyltransferase 3 beta
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-18
Authors: Amaya, M.F., Zeng, H., MacKenzie, F., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Botchkarev, A., Min, J., Wu, H., Structural Genomics Consortium (SGC)
PDB entry 3flh: Crystal structure of lp_1913 protein from Lactobacillus plantarum,Northeast Structural Genomics Consortium Target LpR140B
Classification: structural genomics, unknown function
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-18
Authors: Seetharaman, J., Chen, Y., Forouhar, F., Sahdev, S., Foote, E.L., Ciccosanti, C., Belote, R.L., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3fli: Discovery of XL335, a Highly Potent, Selective and Orally-Active Agonist of the Farnesoid X Receptor (FXR)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-18
Authors: Foster, P.G., Stout, T.J.
PDB entry 3flj: Crystal structure of uncharacterized protein conserved in bacteria with a cystatin-like fold (YP_168589.1) from SILICIBACTER POMEROYI DSS-3 at 2.00 A resolution
Classification: structural genomics, unknown function
Source organism: SILICIBACTER POMEROYI DSS-3
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-18
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3flk: Crystal Structure of Tartrate Dehydrogenase from Pseudomonas putida in complex with NADH, oxalate and metal ion
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-18
Authors: Malik, R., Viola, R.E.
PDB entry 3fll: Crystal structure of E55Q mutant of nitrophorin 4
Classification: TRANSPORT PROTEIN
Source organism: Rhodnius prolixus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-12-18
Authors: Montfort, W.R., Weichsel, A.
PDB entry 3flm: Crystal structure of menD from E.coli
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-12-19
Authors: Priyadarshi, A., Hwang, K.Y.
PDB entry 3fln: P38 kinase crystal structure in complex with R1487
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-19
Authors: Kuglstatter, A., Knapp, M.
PDB entry 3flo: Crystal structure of the carboxyl-terminal domain of yeast DNA polymerase alpha in complex with its B subunit
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-19
Authors: Klinge, S.N., Pellegrini, L.
PDB entry 3flp: Crystal structure of native heptameric SAP-like pentraxin from Limulus polyphemus
Classification: SUGAR BINDING PROTEIN
Source organism: Limulus polyphemus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-19
Authors: Shrive, A.K., Greenhough, T.J., Armstrong, P.B.
PDB entry 3flq: P38 kinase crystal structure in complex with 6-(2,4-difluoro-phenoxy)-2-((s)-2-methanesulfonyl-1-methyl-ethylamino)-8-methyl-8h-pyrido[2,3-d]pyrimidin
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-19
Authors: Kuglstatter, A., Knapp, M.
PDB entry 3flr: Crystal structure of native octameric SAP-like pentraxin from Limulus polyphemus
Classification: SUGAR BINDING PROTEIN
Source organism: Limulus polyphemus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-12-19
Authors: Shrive, A.K., Greenhough, T.J., Armstrong, P.B.
PDB entry 3fls: P38 kinase crystal structure in complex with 6-(2,4-Difluoro-phenoxy)-2-((R)-2-methanesulfonyl-1-methyl-ethylamino)-8-methyl-8H-pyrido[2,3-d]pyrimidin-7-one
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-19
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3flt: Crystal structure of PE-bound octameric SAP-like pentraxin from Limulus polyphemus
Classification: SUGAR BINDING PROTEIN
Source organism: Limulus polyphemus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-12-19
Authors: Shrive, A.K., Greenhough, T.J., Armstrong, P.B.
PDB entry 3flu: Crystal structure of dihydrodipicolinate synthase from the pathogen Neisseria meningitidis
Classification: LYASE
Source organism: Neisseria meningitidis serogroup B
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-19
Authors: Devenish, S.R.A., Hadfield, A.T.
PDB entry 3flv: The crystal structure of human acyl-CoenzymeA binding domain containing 5
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-19
Authors: Ugochukwu, E., Roos, A., Yue, W.W., Shafqat, N., Salah, E., Savitsky, P., Muniz, J.R.C., von Delft, F., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 3flw: P38 kinase crystal structure in complex with pamapimod
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-12-19
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fly: P38 kinase crystal structure in complex with 6-(2,4-difluoro-phenoxy)-2-isopropylamino-8-methyl-8h-pyrido[2,3-d]pyrimidin-7-one
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-19
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3flz: P38 kinase crystal structure in complex WITH 8-Methyl-6-phenoxy-2-(tetrahydro-pyran-4-ylamino)-8H-pyrido[2,3-d]pyrimidin-7-one
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2008-12-19
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fm0: Crystal structure of WD40 protein Ciao1
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-19
Authors: Dong, A., Ravichandran, M., Crombet, L., Cossar, D., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Bountra, C., Bochkarev, A., Min, J., Ouyang, H., Structural Genomics Consortium (SGC)
PDB entry 3fm1: Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii
Classification: OXIDOREDUCTASE
Source organism: Pleurotus eryngii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2008-12-19
Authors: Piontek, K., Martinez, A.T., Choinowski, T., Plattner, D.A.
PDB entry 3fm2: CRYSTAL STRUCTURE OF A PUTATIVE HEME-BINDING PROTEIN (AVA_4353) FROM ANABAENA VARIABILIS ATCC 29413 AT 1.80 A RESOLUTION
Classification: HEME-BINDING PROTEIN
Source organism: Anabaena variabilis ATCC 29413
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-19
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3fm3: Crystal structure of an Encephalitozoon cuniculi methionine aminopeptidase type 2
Classification: HYDROLASE
Source organism: Encephalitozoon cuniculi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2008-12-19
Authors: Alvarado, J.J., Russell, M., Zhang, A., Adams, J., Toro, R., Burley, S.K., Weiss, L.M., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fm4: Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii
Classification: OXIDOREDUCTASE
Source organism: Pleurotus eryngii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2008-12-19
Authors: Piontek, K., Martinez, A.T., Choinowski, T., Plattner, D.A.
PDB entry 3fm5: X-ray crystal structure of transcriptional regulator (MarR family) from Rhodococcus sp. RHA1
Classification: TRANSCRIPTION REGULATOR
Source organism: Rhodococcus jostii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-19
Authors: Nocek, B., Xu, X., Zheng, H., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3fm6: Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii
Classification: OXIDOREDUCTASE
Source organism: Pleurotus eryngii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2008-12-19
Authors: Piontek, K., Martinez, A.T., Choinowski, T., Plattner, D.A.
PDB entry 3fm7: Quaternary Structure of Drosophila melanogaster IC/Tctex-1/LC8; Allosteric Interactions of Dynein Light Chains with Dynein Intermediate Chain
Classification: CONTRACTILE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2008-12-19
Authors: Hall, J.D., Karplus, P.A., Barbar, E.J.
PDB entry 3fm8: Crystal structure of full length centaurin alpha-1 bound with the FHA domain of KIF13B (CAPRI target)
Classification: TRANSPORT PROTEIN/HYDROLASE ACTIVATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-19
Authors: Shen, L., Tong, Y., Tempel, W., MacKenzie, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3fm9: Analysis of the Structural Determinants Underlying Discrimination between Substrate and Solvent in beta-Phosphoglucomutase Catalysis
Classification: ISOMERASE
Source organism: Lactococcus lactis subsp. lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-12-19
Authors: Finci, L., Lahiri, S., Peisach, E., Allen, K.N.
PDB entry 3fma: Crystal structure of the GYF domain of Smy2 in complex with a proline-rich peptide from BBP/ScSF1
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-19
Authors: Ash, M.R., Faelber, K.
PDB entry 3fmb: Crystal structure of dimeric protein of unknown function and ferredoxin-like fold (YP_212648.1) from Bacteroides fragilis NCTC 9343 at 1.85 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-12-19
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3fmc: CRYSTAL STRUCTURE OF a putative succinylglutamate desuccinylase / aspartoacylase family protein (SAMA_0604) FROM SHEWANELLA AMAZONENSIS SB2B AT 1.80 A RESOLUTION
Classification: HYDROLASE
Source organism: Shewanella amazonensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-19
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3fmd: Crystal Structure of Human Haspin with an Isoquinoline ligand
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-21
Authors: Filippakopoulos, P., Eswaran, J., Keates, T., Burgess-Brown, N., Fedorov, O., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3fme: Crystal Structure of Human Mitogen-Activated Protein Kinase Kinase 6 (MEK6) Activated Mutant (S207D, T211D)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2008-12-21
Authors: Filippakopoulos, P., Barr, A., Pike, A.C.W., Berridge, G., Elkins, J., Fedorov, O., Keates, T., Savitsky, P., Soundararajan, M., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3fmf: Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase complexed with 7,8 diaminopelargonic acid carbamate
Classification: LIGASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-12-21
Authors: Dey, S., Sacchettini, J.C.
PDB entry 3fmg: Structure of rotavirus outer capsid protein VP7 trimer in complex with a neutralizing Fab
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Simian rotavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2008-12-22
Authors: Aoki, S.T., Settembre, E.C., Trask, S.D., Greenberg, H.B., Harrison, S.C., Dormitzer, P.R.
PDB entry 3fmh: P38 kinase crystal structure in complex with 6-(2,4-Difluoro-phenoxy)-8-methyl-2-((R)-1-methyl-2-tetrazol-2-yl-ethylamino)-8H-pyrido[2,3-d]pyrimidin-7-one
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-22
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fmi: Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase complexed with 7-Keto 8-aminopelargonic acid
Classification: LIGASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2008-12-22
Authors: Dey, S., Sacchettini, J.C.
PDB entry 3fmj: P38 kinase crystal structure in complex with 4-(5-Methyl-3-phenyl-isoxazol-4-yl)-pyrimidin-2-ylamine
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-22
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fmk: P38 kinase crystal structure in complex with 6-(2,4-Difluoro-phenoxy)-8-methyl-2-((S)-1-methyl-2-tetrazol-2-yl-ethylamino)-8H-pyrido[2,3-d]pyrimidin-7-one
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-22
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fml: P38 kinase crystal structure in complex with RO6224
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-12-22
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fmm: P38 kinase crystal structure in complex with RO6226
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-22
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fmn: P38 kinase crystal structure in complex with RO2530
Classification: SIGNALING PROTEIN, TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-22
Authors: Kuglstatter, A., Ghate, M.
PDB entry 3fmo: Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19
Classification: Oncoprotein/Hydrolase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2008-12-22
Authors: Napetschnig, J., Debler, E.W., Blobel, G., Hoelz, A.
PDB entry 3fmp: Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19
Classification: Oncoprotein/Hydrolase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2008-12-22
Authors: Napetschnig, J., Debler, E.W., Blobel, G., Hoelz, A.
PDB entry 3fmq: Crystal structure of an Encephalitozoon cuniculi methionine aminopeptidase type 2 with angiogenesis inhibitor fumagillin bound
Classification: HYDROLASE
Source organism: Encephalitozoon cuniculi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-22
Authors: Alvarado, J.J., Russell, M., Zhang, A., Adams, J., Toro, R., Burley, S.K., Weiss, L.M., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fmr: Crystal structure of an Encephalitozoon cuniculi methionine aminopeptidase type 2 with angiogenesis inhibitor TNP470 bound
Classification: HYDROLASE
Source organism: Encephalitozoon cuniculi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2008-12-22
Authors: Alvarado, J.J., Russell, M., Zhang, A., Adams, J., Toro, R., Burley, S.K., Weiss, L.M., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fms: Crystal structure of TM0439, a GntR transcriptional regulator
Classification: TRANSCRIPTION REGULATOR
Source organism: Thermotoga maritima MSB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-12-22
Authors: Zheng, M., Cooper, D.R., Yu, M., Hung, L.-W., Derewenda, U., Derewenda, Z.S., Integrated Center for Structure and Function Innovation (ISFI)
PDB entry 3fmt: Crystal structure of SeqA bound to DNA
Classification: REPLICATION INHIBITOR/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.983 Å
Deposited: 2008-12-22
Authors: Chung, Y.S., Brendler, T., Austin, S., Guarne, A.
PDB entry 3fmu: Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii
Classification: OXIDOREDUCTASE
Source organism: Pleurotus eryngii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2008-12-22
Authors: Piontek, K., Martinez, A.T., Choinowski, T., Plattner, D.A.
PDB entry 3fmv: Crystal structure of the serine phosphatase of RNA polymerase II CTD (SSU72 superfamily) from Drosophila melanogaster. Monoclinic crystal form. Northeast Structural Genomics Consortium target FR253.
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2008-12-22
Authors: Kuzin, A.P., Chen, Y., Seetharaman, J., Forouhar, F., Chinag, Y., Fang, Y., Cunningham, K., Ma, L.-C., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3fmw: The crystal structure of MtmOIV, a Baeyer-Villiger monooxygenase from the mithramycin biosynthetic pathway in Streptomyces argillaceus.
Classification: OXIDOREDUCTASE
Source organism: Streptomyces argillaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2008-12-22
Authors: Noinaj, N., Beam, M.P., Wang, C., Rohr, J.
PDB entry 3fmx: Crystal structure of Tartrate dehydrogenase from Pseudomonas putida complexed with NADH
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-12-22
Authors: Malik, R., Viola, R.E.
PDB entry 3fmy: Structure of the C-terminal domain of the E. coli protein MQSA (YgiT/b3021)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-12-22
Authors: Page, R., Brown, B.L., Arruda, J.M., Peti, W.
PDB entry 3fmz: Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with non-retinoid ligand
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-12-22
Authors: Wang, Z., Johnstone, S., Walker, N.P.
PDB entry 3fn0: Crystal structure of HIV-1 neutralizing human Fab Z13e1 in complex with a 12-residue peptide containing the Z13e1 epitope on gp41
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-22
Authors: Pejchal, R., Wilson, I.A., Zwick, M.B.
PDB entry 3fn1: E2-RING expansion of the NEDD8 cascade confers specificity to cullin modification.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-22
Authors: Huang, D.T., Ayrault, O., Hunt, H.W., Taherbhoy, A.M., Duda, D.M., Scott, D.C., Borg, L.A., Neale, G., Murray, P.J., Roussel, M.F., Schulman, B.A.
PDB entry 3fn2: Crystal structure of a putative sensor histidine kinase domain from Clostridium symbiosum ATCC 14940
Classification: TRANSFERASE
Source organism: Clostridium symbiosum ATCC 14940
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-23
Authors: Cuff, M.E., Tesar, C., Freeman, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3fn3: Dimeric Structure of PD-L1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-12-23
Authors: Chen, Y., Gao, F., Liu, P., Chu, F., Qi, J., Gao, G.F.
PDB entry 3fn4: Apo-form of NAD-dependent formate dehydrogenase from bacterium Moraxella sp.C-1 in closed conformation
Classification: OXIDOREDUCTASE
Source organism: Moraxella sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2008-12-23
Authors: Shabalin, I.G., Polyakov, K.M., Filippova, E.V., Dorovatovskiy, P.V., Tikhonova, T.V., Sadykhov, E.G., Tishkov, V.I., Popov, V.O.
PDB entry 3fn5: Crystal structure of sortase A (Spy1154) from Streptococcus pyogenes serotype M1 strain SF370
Classification: HYDROLASE
Source organism: Streptococcus pyogenes serotype M1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-12-23
Authors: Banfield, M.J.
PDB entry 3fn6: Crystal structure of sortase A from Streptococcus pyogenes serotype M1 strain SF370 with the active site Cys in its sulphenic acid form
Classification: HYDROLASE
Source organism: Streptococcus pyogenes serotype M1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-23
Authors: Banfield, M.J.
PDB entry 3fn7: Crystal structure of sortase A (Spy1154) from Streptococcus pyogenes serotype M1 strain SF370
Classification: HYDROLASE
Source organism: Streptococcus pyogenes serotype M1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-12-23
Authors: Banfield, M.J.
PDB entry 3fn8: Crystal Structure of MerB complexed with mercury
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2008-12-23
Authors: Momany, C., Summers, A., Cagle, C., Teske, J.
PDB entry 3fn9: Crystal structure of putative beta-galactosidase from bacteroides fragilis
Classification: HYDROLASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-12-23
Authors: Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fna: Crystal structure of the CBS pair of possible D-arabinose 5-phosphate isomerase yrbH from Escherichia coli CFT073
Classification: ISOMERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-12-23
Authors: Cuff, M.E., Bigelow, L., Buck, K., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3fnb: Crystal structure of acylaminoacyl peptidase SMU_737 from Streptococcus mutans UA159
Classification: HYDROLASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1178 Å
Deposited: 2008-12-23
Authors: Kim, Y., Hatzos, C., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3fnc: Crystal structure of a putative acetyltransferase from Listeria innocua
Classification: TRANSFERASE
Source organism: Listeria innocua
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-12-24
Authors: Cuff, M.E., Tesar, C., Freeman, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3fnd: Crystal structure of a chitinase from Bacteroides thetaiotaomicron
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-24
Authors: Damodharan, L., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fne: Crystal structure of InhA bound to triclosan derivative 17
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2008-12-24
Authors: Wang, F.
PDB entry 3fnf: Crystal structure of InhA bound to triclosan derivative
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-24
Authors: Wang, F.
PDB entry 3fng: Crystal structure of InhA bound to triclosan derivative
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2008-12-24
Authors: Wang, F.
PDB entry 3fnh: Crystal structure of InhA bound to triclosan derivative
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-12-24
Authors: Wang, F.
PDB entry 3fni: Crystal structure of a diflavin flavoprotein A3 (all3895) from Nostoc sp., Northeast Structural Genomics Consortium Target NsR431A
Classification: OXIDOREDUCTASE
Source organism: Nostoc sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-24
Authors: Forouhar, F., Lew, S., Seetharaman, J., Sahdev, S., Xiao, R., Foote, E.L., Ciccosanti, C., Wang, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3fnj: Crystal structure of the full-length lp_1913 protein from Lactobacillus plantarum, Northeast Structural Genomics Consortium Target LpR140
Classification: structural genomics, unknown function
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-12-25
Authors: Seetharaman, J., Chen, Y., Forouhar, F., Sahdev, S., Janjua, H., Xiao, R., Ciccosanti, C., Foote, E.L., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3fnk: Crystal structure of the second type II cohesin module from the cellulosomal adaptor ScaA scaffoldin of Acetivibrio cellulolyticus
Classification: STRUCTURAL PROTEIN
Source organism: Acetivibrio cellulolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2008-12-25
Authors: Noach, I., Frolow, F., Bayer, E.A.
PDB entry 3fnl: Crystal Structure of the Complex of Buffalo Lactoperoxidase with Salicylhydroxamic Acid at 2.48 A Resolution
Classification: OXIDOREDUCTASE
Source organism: Bubalus bubalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2008-12-25
Authors: Sheikh, I.A., Vikram, G., Singh, N., Sinha, M., Bhushan, A., Sharma, S., Kaur, P., Singh, T.P.
PDB entry 3fnm: Crystal structure of acivicin-inhibited gamma-glutamyltranspeptidase reveals critical roles for its C-terminus in autoprocessing and catalysis
Classification: TRANSFERASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-25
Authors: Williams, K., Cullati, S., Sand, A., Biterova, E.I., Barycki, J.J.
PDB entry 3fnn: Biochemical and structural analysis of an atypical ThyX: Corynebacterium glutamicum NCHU 87078 depends on ThyA for thymidine biosynthesis
Classification: TRANSFERASE
Source organism: Corynebacterium glutamicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-26
Authors: Wang, W.-C., Liu, J.-S., Chang, C.-M.
PDB entry 3fnq: Crystal structure of schistosoma purine nucleoside phosphorylase in complex with hypoxanthine
Classification: TRANSFERASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-12-26
Authors: Castilho, M.S., Pereira, H.M., Garratt, R.C., Oliva, G.
PDB entry 3fnr: CRYSTAL STRUCTURE OF PUTATIVE ARGINYL T-RNA SYNTHETASE FROM Campylobacter jejuni;
Classification: TRANSFERASE
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-12-26
Authors: Patskovsky, Y., Ramagopal, U., Toro, R., Gilmore, M., Chang, S., Groshong, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3fns: Crystal structure of histo-aspartic protease (HAP) from Plasmodium Falciparum
Classification: HYDROLASE
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-26
Authors: Bhaumik, P., Gustchina, A., Wlodawer, A.