LiteFold/PDB huggingface dataset:
PDB entry 6u7v: xRRM structure of spPof8
Classification: GENE REGULATION
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2019-09-03
Authors: Kim, J.-K., Hu, X., Yu, C., Jun, H.-I., Liu, J., Sankaran, B., Huang, L., Qiao, F.
PDB entry 6u7w: NMR solution structure of a triazole bridged KLK7 inhibitor
Classification: BIOSYNTHETIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-09-03
Authors: White, A.M., Harvey, P.J., Durek, T., Craik, D.J.
PDB entry 6u7x: NMR solution structure of triazole bridged plasmin inhibitor
Classification: BIOSYNTHETIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2019-09-03
Authors: White, A.M., Harvey, P.J., Wang, C.K., Durek, T., Craik, D.J.
PDB entry 6u7y: RNA hairpin structure containing one TNA nucleotide as template
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2019-09-03
Authors: Szostak, J.W., Zhang, W.
PDB entry 6u7z: RNA hairpin structure containing one TNA nucleotide as primer
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2019-09-03
Authors: Szostak, J.W., Zhang, W.
PDB entry 6u80: Discovery and optimization of salicyclic acid-derived sulfonamide inhibitors of the WDR5:MYC protein-protein interaction
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-09-04
Authors: Zhao, B., Wang, F.
PDB entry 6u81: Crystal Structure of the Double Homeodomain of DUX4 in Complex with a DNA aptamer
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2019-09-04
Authors: Shi, K., Aihara, H.
PDB entry 6u82: Crystal Structure of the Double Homeodomain of DUX4 in Complex with a DNA aptamer containing bulge and loop
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2019-09-04
Authors: Shi, K., Aihara, H.
PDB entry 6u83: OmpA-like domain of FopA1 from Francisella tularensis subsp. tularensis SCHU S4
Classification: PEPTIDE BINDING PROTEIN
Source organism: Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3566 Å
Deposited: 2019-09-04
Authors: Michalska, K., Skarina, T., Stogios, P.J., Di Leo, R., Savchenko, A., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6u84: Apo full-length rat TRPV2 in nanodiscs, state 1
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-09-04
Authors: Pumroy, R.A., Moiseenkova-Bell, V.Y.
PDB entry 6u85: Site-specific lysine arylation as an alternative bioconjugation strategy for chemically programmed antibodies and antibody-drug conjugates
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2019-09-04
Authors: Park, H., Rader, C.
PDB entry 6u86: Apo full-length rat TRPV2 in nanodiscs, state 2
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2019-09-04
Authors: Pumroy, R.A., Moiseenkova-Bell, V.Y.
PDB entry 6u87: Pseudomonas aeruginosa HasA mutant - Y75H
Classification: METAL BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2019-09-04
Authors: Brimberry, M., Lanzilotta, W., Wilks, A., Dent, A.
PDB entry 6u88: CBD-bound full-length rat TRPV2 in nanodiscs, state 2
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-09-04
Authors: Pumroy, R.A., Moiseenkova-Bell, V.Y.
PDB entry 6u89: RNA duplex, bound with TNA monomer
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2019-09-04
Authors: Szostak, J.W., Zhang, W.
PDB entry 6u8a: CBD-bound full-length rat TRPV2 in nanodiscs, state 1
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-09-04
Authors: Pumroy, R.A., Moiseenkova-Bell, V.Y.
PDB entry 6u8b: Discovery and optimization of salicyclic acid-derived sulfonamide inhibitors of the WDR5:MYC protein-protein interaction
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.261 Å
Deposited: 2019-09-04
Authors: Zhao, B., Wang, F.
PDB entry 6u8c: Crystal structure of an engineered ultra-high affinity Fab-Protein G complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Streptococcus sp. 'group G'
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2019-09-04
Authors: Slezak, T., Filippova, E.V., Davydova, E.K., Kossiakoff, A.A.
PDB entry 6u8d: Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV2
Classification: RNA/Immune System
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.807 Å
Deposited: 2019-09-04
Authors: Koirala, D., Lewicka, A., Koldobskaya, Y., Huang, H., Piccirilli, J.A.
PDB entry 6u8e: Human IMPDH2 treated with ATP, IMP, and NAD+. Filament assembly interface reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2019-09-04
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6u8f: RNA hairpin, bound with TNA monomer
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2019-09-04
Authors: Szostak, J.W., Zhang, W.
PDB entry 6u8g: BRD4-BD2 in complex with the cyclic peptide 3.1_2_AcK7toA
Classification: Transcription/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-09-05
Authors: Patel, K., Walshe, J.L., Walport, L.J., Mackay, J.P., Mouradian, K.S.
PDB entry 6u8h: BRD2-BD1 in complex with the cyclic peptide 3.2_2
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2019-09-05
Authors: Patel, K., Walshe, J.L., Walport, L.J., Mackay, J.P.
PDB entry 6u8i: BRD4-BD2 in complex with the cyclic peptide 3.2_2
Classification: Transcription/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-09-05
Authors: Patel, K., Walshe, J.L., Walport, L.J., Mackay, J.P.
PDB entry 6u8j: Crystal structure of 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase/phospho-2-dehydro-3-deoxyheptonate aldolase (Aro3) from Candida auris
Classification: TRANSFERASE
Source organism: Candida auris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.492 Å
Deposited: 2019-09-05
Authors: Michalska, K., Evdokimova, E., Semper, C., Di Leo, R., Stogios, P.J., Savchenko, A., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6u8k: Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV3
Classification: RNA/Immune System
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2019-09-05
Authors: Koirala, D., Lewicka, A., Koldobskaya, Y., Huang, H., Piccirilli, J.A.
PDB entry 6u8l: Discovery and optimization of salicyclic acid-derived sulfonamide inhibitors of the WDR5:MYC protein-protein interaction
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2019-09-05
Authors: Zhao, B., Wang, F.
PDB entry 6u8m: BRD4-BD1 in complex with the cyclic peptide 3.2_1
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-09-05
Authors: Patel, K., Walshe, J.L., Walport, L.J., Mackay, J.P.
PDB entry 6u8n: Human IMPDH2 treated with ATP, IMP, and NAD+. Fully extended filament segment reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2019-09-05
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6u8o: Discovery and optimization of salicyclic acid-derived sulfonamide inhibitors of the WDR5:MYC protein-protein interaction
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-09-05
Authors: Zhao, B., Wang, F.
PDB entry 6u8p: Crystal structure of DNMT3B-DNMT3L in complex with CpGpA DNA
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2019-09-05
Authors: Gao, L., Song, J.
PDB entry 6u8q: CryoEM structure of HIV-1 cleaved synaptic complex (CSC) intasome
Classification: TRANSFERASE/TRANSFERASE INHIBITOR/DNA
Source organism: Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.67 Å
Deposited: 2019-09-05
Authors: Li, M., Chen, X., Craigie, R.
PDB entry 6u8r: Human IMPDH2 treated with ATP, IMP, and NAD+. Bent (1/4 compressed, 3/4 extended) segment reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.91 Å
Deposited: 2019-09-05
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6u8s: Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Filament assembly interface reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2019-09-05
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6u8t: Crystal structure of YopT domain of Pasteurella Multocida PfhB2-toxin
Classification: HYDROLASE
Source organism: Pasteurella multocida (strain Pm70)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2019-09-05
Authors: Kumar, S., Mattoo, S.
PDB entry 6u8u: RNA duplex bound with TNA 3'-3' imidazolium dimer
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-09-05
Authors: Szostak, J.W., Zhang, W.
PDB entry 6u8v: Crystal structure of DNMT3B-DNMT3L in complex with CpGpT DNA
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-09-06
Authors: Gao, L., Zhang, Z.M., Song, J.
PDB entry 6u8w: Crystal structure of DNMT3B(K777A)-DNMT3L in complex with CpGpT DNA
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94892 Å
Deposited: 2019-09-06
Authors: Gao, L., Zhang, Z.M., Song, J.
PDB entry 6u8x: Crystal structure of DNMT3B-DNMT3L in complex with CpApG DNA
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95064 Å
Deposited: 2019-09-06
Authors: Gao, L., Song, J.
PDB entry 6u8y: Structure of the membrane-bound sulfane sulfur reductase (MBS), an archaeal respiratory membrane complex
Classification: MEMBRANE PROTEIN
Source organism: Pyrococcus furiosus COM1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2019-09-06
Authors: Yu, H.J., Li, H.L.
PDB entry 6u8z: Crystal Structure of Catalytic Domain of Human Phospholipase D1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2019-09-06
Authors: Bowling, F.Z., Airola, M.V.
PDB entry 6u90: Crystal structure of DNMT3B(N779A)-DNMT3L in complex with CpGpT DNA
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.00082 Å
Deposited: 2019-09-06
Authors: Gao, L., Song, J.
PDB entry 6u91: Crystal structure of DNMT3B(Q772R)-DNMT3L in complex with CpGpT DNA
Classification: Transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99999 Å
Deposited: 2019-09-06
Authors: Gao, L., Song, J.
PDB entry 6u94: Structure of RND efflux system, outer membrane lipoprotein, NodT family from Burkholderia mallei ATCC 23344
Classification: LIPID TRANSPORT
Source organism: Burkholderia mallei (strain ATCC 23344)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-09-06
Authors: Horanyi, P.S., Fox III, D., Abendroth, J., Lorimer, D., Edwards, T., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6u95: Adeno-associated virus strain AAVhu.37 capsid icosahedral structure
Classification: VIRUS
Source organism: Adeno-associated virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2019-09-06
Authors: Kaelber, J.T., Yost, S.A., Firlar, E., Mercer, A.C.
PDB entry 6u96: Actin phalloidin at BeFx state
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-09-06
Authors: Das, S., Ge, P., Durer, Z.A.O., Grintsevich, E.E., Zhou, Z.H., Reisler, E.
PDB entry 6u97: Structure of OmcF_H47I mutant
Classification: ELECTRON TRANSPORT
Source organism: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2019-09-06
Authors: Pokkuluri, P.R.
PDB entry 6u98: Hsp90a NTD K58R bound reversibly to sulfonyl fluoride 6
Classification: CHAPERONE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-09-06
Authors: Cuesta, A., Wan, X., Taunton, J.
PDB entry 6u99: Hsp90a NTD covalently bound to sulfonyl fluoride probe 1 at K58
Classification: CHAPERONE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-09-06
Authors: Cuesta, A., Wan, X., Taunton, J.
PDB entry 6u9a: Hsp90a NTD K58R bound reversibly to sulfonyl fluoride 5
Classification: CHAPERONE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-09-07
Authors: Cuesta, A., Wan, X., Taunton, J.
PDB entry 6u9b: Hsp90a NTD covalently bound to sulfonyl fluoride 5 at K58
Classification: CHAPERONE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-09-07
Authors: Cuesta, A., Wan, X., Taunton, J.
PDB entry 6u9c: The 2.2 A Crystal Structure of the Type B Chloramphenicol Acetyltransferase from Vibrio cholerae in the complex with Acetyl CoA
Classification: TRANSFERASE
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-09-07
Authors: Kim, Y., Maltseva, N., Stam, J., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6u9d: Saccharomyces cerevisiae acetohydroxyacid synthase
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.194 Å
Deposited: 2019-09-08
Authors: Guddat, L.W., Lonhienne, T.
PDB entry 6u9e: Structure of PdpA-VgrG Complex, Lidless
Classification: TRANSPORT PROTEIN
Source organism: Francisella novicida
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.21 Å
Deposited: 2019-09-08
Authors: Yang, X., Clemens, D.L., Lee, B.-Y., Cui, Y., Zhou, Z.H., Horwitz, M.A.
PDB entry 6u9f: Structure of Francisella PdpA-VgrG Complex, Lidded
Classification: TRANSPORT PROTEIN
Source organism: Francisella tularensis subsp. novicida (strain U112)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.35 Å
Deposited: 2019-09-08
Authors: Yang, X., Clemens, D.L., Lee, B.-Y., Cui, Y.X., Horwitz, M.A., Zhou, Z.H.
PDB entry 6u9g: Structure of Francisella PdpA-VgrG Complex, half-lidded
Classification: TRANSPORT PROTEIN
Source organism: Francisella tularensis subsp. novicida (strain U112)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Deposited: 2019-09-08
Authors: Yang, X., Clemens, D.L., Lee, B.-Y., Cui, Y., Zhou, Z.H., Horwitz, M.A.
PDB entry 6u9h: Arabidopsis thaliana acetohydroxyacid synthase complex
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-09-08
Authors: Guddat, L.W., Low, Y.S., Rao, Z.
PDB entry 6u9i: Crystal structure of BvnE pinacolase from Penicillium brevicompactum
Classification: ISOMERASE
Source organism: Penicillium brevicompactum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.777 Å
Deposited: 2019-09-09
Authors: Ye, Y., Du, L., Zhang, X., Newmister, S.A., McCauley, M., Alegre-Requena, J.V., Zhang, W., Mu, S., Minami, A., Fraley, A.E., Adrover-Castellano, M.L., Carney, N., Shende, V.V., Oikawa, H., Kato, H., Tsukamoto, S., Paton, R.S., Williams, R.M., Sherman, D.H., Li, S.
PDB entry 6u9j: Crystal structure of ChuX
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-09-09
Authors: Mathew, L.G., Lanzilotta, W.N.
PDB entry 6u9k: MLL1 SET N3861I/Q3867L bound to inhibitor 18 (TC-5153)
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-09-09
Authors: Petrunak, E.M., Stuckey, J.A.
PDB entry 6u9l: Imidazole-triggered RAS-specific subtilisin SUBT_BACAM
Classification: HYDROLASE
Source organism: Bacillus amyloliquefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-09-09
Authors: Toth, E.A., Bryan, P.N., Orban, J.
PDB entry 6u9m: MLL1 SET N3861I/Q3867L bound to inhibitor 16 (TC-5109)
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2019-09-09
Authors: Petrunak, E.M., Stuckey, J.A.
PDB entry 6u9n: MLL1 SET N3861I/Q3867L bound to inhibitor 14 (TC-5139)
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-09-09
Authors: Petrunak, E.M., Stuckey, J.A.
PDB entry 6u9o: Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Fully compressed filament segment reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2019-09-09
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6u9p: Wild-type MthK pore in ~150 mM K+
Classification: TRANSPORT PROTEIN
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-09-09
Authors: Posson, D.J., Nimigean, C.M.
PDB entry 6u9q: Crystal Structure Analysis of DNA-BCL11A Znf domain complex
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2019-09-09
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 6u9r: MLL1 SET N3861I/Q3867L bound to inhibitor 12 (TC-5140)
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-09-09
Authors: Petrunak, E.M., Stuckey, J.A.
PDB entry 6u9s: Crystal structure of human CD81 large extracellular loop in complex with 5A6 Fab
Classification: CELL ADHESION
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-09-09
Authors: Susa, K.J., Seegar, T.C.M., Blacklow, S.C.B., Kruse, A.C.
PDB entry 6u9t: Wild-type MthK pore in 50 mM K+
Classification: TRANSPORT PROTEIN
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-09-09
Authors: Posson, D.J., Nimigean, C.M.
PDB entry 6u9u: Structure of GM9_TH8seq732127 FAB
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2019-09-09
Authors: Singh, S., Liban, T.J., Pancera, M.
PDB entry 6u9v: Cryo electron microscopy structure of the ATP-gated rat P2X7 ion channel in the apo, closed state
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-09-09
Authors: Mansoor, S.E., McCarthy, A.E.
PDB entry 6u9w: Cryo electron microscopy structure of the ATP-gated rat P2X7 ion channel in the ATP-bound, open state
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-09-09
Authors: Mansoor, S.E., McCarthy, A.E.
PDB entry 6u9x: Structure of T. brucei MERS1-RNA complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Trypanosoma brucei; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-09-09
Authors: Schumacher, M.A.
PDB entry 6u9y: Wild-type MthK pore in 11 mM K+
Classification: TRANSPORT PROTEIN
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-09-09
Authors: Posson, D.J., Nimigean, C.M.
PDB entry 6u9z: Wild-type MthK pore in 6 mM K+
Classification: TRANSPORT PROTEIN
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.954 Å
Deposited: 2019-09-09
Authors: Posson, D.J., Nimigean, C.M.
PDB entry 6ua1: Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the no-metal bound form
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-09-10
Authors: Kim, Y., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6ua2: Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Bent (2/4 compressed, 2/4 extended) segment reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2019-09-10
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6ua3: Human Mcl-1 in complex with a modified Bim BH3 peptide
Classification: PEPTIDE BINDING PROTEIN/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.552 Å
Deposited: 2019-09-10
Authors: Mandal, T., Grant, R.A., Keating, A.E.
PDB entry 6ua4: Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Bent (3/4 compressed, 1/4 extended) segment reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2019-09-10
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6ua5: Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Free interfacial octamer reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2019-09-10
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6uab: Human Mcl-1 in complex with a modified unnatural Bim BH3 peptide
Classification: PEPTIDE BINDING PROTEIN/Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-09-10
Authors: Mandal, T., Grant, R.A., Keating, A.E.
PDB entry 6uac: Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the complex with cadmium and hydrolyzed moxolactam
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-09-10
Authors: Kim, Y., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6uad: Ketosteroid isomerase (C. testosteroni) with truncated & designed loop for precise positioning of a catalytic E38
Classification: ISOMERASE
Source organism: Comamonas testosteroni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-09-10
Authors: Kundert, K., Thompson, M.C., Liu, L., Fraser, J.S., Kortemme, T.
PDB entry 6uae: Ketosteroid isomerase (C. testosteroni) with truncated & designed loop for precise positioning of a catalytic E38
Classification: ISOMERASE
Source organism: Comamonas testosteroni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2019-09-10
Authors: Krivacic, C., Kundert, K., Thompson, M.C., Fraser, J.S., Kortemme, T.
PDB entry 6uaf: Crystal Structure of the Metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the Complex with Hydrolyzed Imipnem
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-09-10
Authors: Kim, Y., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6uag: Closed Dimer of Y77A Mutant Putative Ryanodine Receptor from Bacteroides thetaiotaomicron VPI-5482
Classification: METAL TRANSPORT
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.709 Å
Deposited: 2019-09-10
Authors: Wu, R., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 6uah: Crystal Structure of the Metallo-beta-Lactamase L1 from Stenotrophomonas maltophilia in the Complex with Hydrolyzed Meropenem
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2019-09-10
Authors: Kim, Y., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6uai: Imidazole-triggered RAS-specific subtilisin SUBT_BACAM complexed with YSAM peptide
Classification: HYDROLASE
Source organism: Bacillus amyloliquefaciens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2019-09-10
Authors: Toth, E.A., Bryan, P.N., Orban, J.
PDB entry 6uaj: Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Free canonical octamer reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2019-09-10
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6uak: LahSb - C-terminal methyltransferase involved in RiPP biosynthesis
Classification: TRANSFERASE
Source organism: Lachnospiraceae bacterium C6A11
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2019-09-10
Authors: Nair, S.K., Estrada, P.
PDB entry 6ual: A Self-Assembling DNA Crystal Scaffold with Cavities Containing 3 Helical Turns per Edge
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.514 Å
Deposited: 2019-09-10
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6uam: Apo-form Dimer of Y77A Mutant Putative Ryanodine Receptor from Bacteroides thetaiotaomicron VPI-5482
Classification: METAL TRANSPORT
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.802 Å
Deposited: 2019-09-11
Authors: Wu, R., Joachimiak, A., Jedrzejczak, R., Midwest Center for Structural Genomics (MCSG)
PDB entry 6uan: B-Raf:14-3-3 complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Spodoptera aff. frugiperda 1 BOLD-2017
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-09-11
Authors: Kondo, Y., Ognjenovic, J., Banerjee, S., Karandur, D., Merk, A., Kulhanek, K., Wong, K., Roose, J.P., Subramaniam, S., Kuriyan, J.
PDB entry 6uao: Imidazole-triggered RAS-specific subtilisin SUBT_BACAM complexed with the peptide EEYSAM
Classification: HYDROLASE
Source organism: Bacillus amyloliquefaciens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2019-09-11
Authors: Toth, E.A., Bryan, P.N., Orban, J.
PDB entry 6uap: Crystal structure of tryptophan synthase from M. tuberculosis - open form with BRD6309 bound
Classification: Lyase/Lyase Inhibitor
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.745 Å
Deposited: 2019-09-11
Authors: Chang, C., Michalska, K., Maltseva, N.I., Jedrzejczak, R., McCarren, P., Nag, P.P., Joachimiak, A., Satchell, K., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6uaq: Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase from Amycolatopsis mediterranei (AmGH128_I)
Classification: HYDROLASE
Source organism: Amycolatopsis mediterranei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2019-09-11
Authors: Costa, P.A.C.R., Santos, C.R., Murakami, M.T.
PDB entry 6uar: Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaritriose
Classification: HYDROLASE
Source organism: Amycolatopsis mediterranei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2019-09-11
Authors: Costa, P.A.C.R., Santos, C.R., Murakami, M.T.
PDB entry 6uas: Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E199A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaripentaose
Classification: HYDROLASE
Source organism: Amycolatopsis mediterranei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2019-09-11
Authors: Vieira, P.S., Cabral, L., Costa, P.A.C.R., Santos, C.R., Murakami, M.T.
PDB entry 6uat: Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E102A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaripentaose
Classification: HYDROLASE
Source organism: Amycolatopsis mediterranei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-09-11
Authors: Vieira, P.S., Cabral, L., Costa, P.A.C.R., Santos, C.R., Murakami, M.T.
PDB entry 6uau: Crystal structure of a GH128 (subgroup I) endo-beta-1,3-glucanase (E102A mutant) from Amycolatopsis mediterranei (AmGH128_I) in complex with laminaritriose and laminaribiose
Classification: HYDROLASE
Source organism: Amycolatopsis mediterranei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-09-11
Authors: Vieira, P.S., Cabral, L., Costa, P.A.C.R., Santos, C.R., Murakami, M.T.
PDB entry 6uav: Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Pseudomonas viridiflava (PvGH128_II)
Classification: HYDROLASE
Source organism: Pseudomonas viridiflava
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Costa, P.A.C.R., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6uaw: Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Pseudomonas viridiflava (PvGH128_II) in complex with laminaritriose
Classification: HYDROLASE
Source organism: Pseudomonas viridiflava
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Costa, P.A.C.R., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6uax: Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Sorangium cellulosum (ScGH128_II)
Classification: HYDROLASE
Source organism: Sorangium cellulosum So ce56
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Costa, P.A.C.R., Domingues, M.N., Lima, E.A., Mandelli, F., Vieira, P.S., Murakami, M.T.
PDB entry 6uay: Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III)
Classification: HYDROLASE
Source organism: Blastomyces gilchristii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-09-11
Authors: Costa, P.A.C.R., Santos, C.R., Domingues, M.N., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6uaz: Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with glucose
Classification: HYDROLASE
Source organism: Blastomyces gilchristii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-09-11
Authors: Costa, P.A.C.R., Santos, C.R., Domingues, M.N., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6ub0: Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -2 and -1 subsites
Classification: HYDROLASE
Source organism: Blastomyces gilchristii (strain SLH14081)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-09-11
Authors: Costa, P.A.C.R., Santos, C.R., Domingues, M.N., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6ub1: Crystal structure of a GH128 (subgroup III) curdlan-specific exo-beta-1,3-glucanase from Blastomyces gilchristii (BgGH128_III) in complex with laminaribiose at -3 and -2 subsites
Classification: HYDROLASE
Source organism: Blastomyces gilchristii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-09-11
Authors: Costa, P.A.C.R., Santos, C.R., Domingues, M.N., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6ub2: Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV)
Classification: HYDROLASE
Source organism: Lentinula edodes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Lima, E.A., Mandelli, F., Vieira, P.S., Murakami, M.T.
PDB entry 6ub3: Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) with laminaribiose at the surface-binding site
Classification: HYDROLASE
Source organism: Lentinula edodes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6ub4: Crystal structure (C2 form) of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritriose
Classification: HYDROLASE
Source organism: Lentinula edodes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6ub5: Crystal structure (P21 form) of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritriose
Classification: HYDROLASE
Source organism: Lentinula edodes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6ub6: Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritetraose
Classification: HYDROLASE
Source organism: Lentinula edodes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Lima, E.A., Mandelli, F., Murakami, M.T.
PDB entry 6ub7: Crystal structure of a GH128 (subgroup V) exo-beta-1,3-glucanase from Cryptococcus neoformans (CnGH128_V)
Classification: HYDROLASE
Source organism: Cryptococcus neoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Costa, P.A.C.R., Murakami, M.T.
PDB entry 6ub8: Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI)
Classification: HYDROLASE
Source organism: Aureobasidium namibiae CBS 147.97
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Vieira, P.S., Domingues, M.N., Cordeiro, R.L., Tomazini, A., Murakami, M.T.
PDB entry 6ub9: Crystal structure of tryptophan synthase from M. tuberculosis - AMINOACRYLATE- AND BRD6309-BOUND FORM
Classification: Lyase/Lyase Inhibitor
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.783 Å
Deposited: 2019-09-11
Authors: Chang, C., Michalska, K., Maltseva, N.I., Jedrzejczak, R., McCarren, P., Nag, P.P., Joachimiak, A., Satchell, K., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6uba: Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI) in complex with laminaritriose
Classification: HYDROLASE
Source organism: Aureobasidium namibiae CBS 147.97
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Vieira, P.S., Domingues, M.N., Cordeiro, R.L., Tomazini, A., Murakami, M.T.
PDB entry 6ubb: Crystal structure of a GH128 (subgroup VI) exo-beta-1,3-glucanase from Aureobasidium namibiae (AnGH128_VI) with laminaribiose at the surface-binding site
Classification: HYDROLASE
Source organism: Aureobasidium namibiae CBS 147.97
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Vieira, P.S., Domingues, M.N., Cordeiro, R.L., Tomazini, A., Murakami, M.T.
PDB entry 6ubc: Crystal structure of a GH128 (subgroup VII) oligosaccharide-binding protein from Cryptococcus neoformans (CnGH128_VII)
Classification: HYDROLASE
Source organism: Cryptococcus neoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Costa, P.A.C.R., Souza, B.P., Vieira, P.S., Murakami, M.T.
PDB entry 6ubd: Crystal structure of a GH128 (subgroup VII) oligosaccharide-binding protein from Trichoderma gamsii (TgGH128_VII)
Classification: HYDROLASE
Source organism: Trichoderma gamsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2019-09-11
Authors: Santos, C.R., Costa, P.A.C.R., Souza, B.P., Murakami, M.T.
PDB entry 6ube: Azide-triggered subtilisin SUBT_BACAM complexed with the peptide LFRAL
Classification: HYDROLASE
Source organism: Bacillus amyloliquefaciens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-09-11
Authors: Toth, E.A., Bryan, P.N., Orban, J., Gallagher, D.T., Custer, G.
PDB entry 6ubf: Role of Beta-hairpin motifs in the DNA duplex opening by the Rad4/XPC nucleotide excision repair complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.597 Å
Deposited: 2019-09-11
Authors: Paul, D., Min, J.H.
PDB entry 6ubh: Structure of the MM7 Erbin PDZ variant in complex with a high-affinity peptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-09-11
Authors: Singer, A.U., Teyra, J., McLaughlin, M., Ernst, A., Sicheri, F., Sidhu, S.S.
PDB entry 6ubi: N123-VRC34.05 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.903 Å
Deposited: 2019-09-11
Authors: Xu, K., Liu, K., Kwong, P.D.
PDB entry 6ubl: Structure of DynF from the Dynemicin Biosynthesis Pathway of Micromonospora chersina
Classification: UNKNOWN FUNCTION
Source organism: Micromonospora chersina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.499 Å
Deposited: 2019-09-12
Authors: Kosgei, A.J., Miller, M.D., Xu, W., Bhardwaj, M., Van Lanen, S.G., Thorson, J.S., Phillips Jr., G.N.
PDB entry 6ubm: AAV8 Baculovirus-Sf9 produced, empty capsid
Classification: VIRUS
Source organism: Adeno-associated virus - 8
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-09-12
Authors: Paulk, N.K., Poweleit, N.
PDB entry 6ubn: Crystal structure of D678E GoxA bound to glycine
Classification: OXIDOREDUCTASE
Source organism: Pseudoalteromonas luteoviolacea DSM 6061
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-09-12
Authors: Yukl, E.T.
PDB entry 6ubo: Fluorogen Activating Protein Dib1
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2019-09-12
Authors: Muslinkina, L., Pletneva, N., Pletnev, V.Z., Pletnev, S.
PDB entry 6ubp: Crystal structure of a photochemical intermediate of human indoleamine 2,3-dioxygenase 1 in complex with carbon monoxide and tryptophan
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2019-09-12
Authors: Pham, K.N., Yeh, S.R.
PDB entry 6ubq: Crystal Structure of Ketosteroid Isomerase from Pseudomonas Putida (pKSI) bound to 4-Androstenedione at 100 K
Classification: ISOMERASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2991 Å
Deposited: 2019-09-12
Authors: Yabukarski, F., Herschlag, D.
PDB entry 6ubr: Crystal structure of D678A GoxA bound to glycine at pH 7.5
Classification: OXIDOREDUCTASE
Source organism: Pseudoalteromonas luteoviolacea DSM 6061
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2019-09-12
Authors: Yukl, E.T., Avalos, D.
PDB entry 6ubs: Full length Glycine receptor reconstituted in lipid nanodisc in Apo/Resting conformation
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2019-09-12
Authors: Kumar, A., Basak, S., Chakrapani, S.
PDB entry 6ubt: Full length Glycine receptor reconstituted in lipid nanodisc in Gly-bound desensitized conformation
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2019-09-12
Authors: Kumar, A., Basak, S., Chakrapani, S.
PDB entry 6ubu: 1.60 A resolution structure of the guanine riboswitch bound to guanine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-09-13
Authors: Matyjasik, M.M., Batey, R.T.
PDB entry 6ubv: The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
Classification: CELL ADHESION
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-09-13
Authors: Schormann, N., Deivanayagam, C.
PDB entry 6ubw: MET Tyrosine Kinase Inhibition Enhances the Antitumor Efficacy of an HGF Antibody
Classification: TRANSFERASE-TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-09-13
Authors: Hoffman, I.D., Lawson, J.D.
PDB entry 6uby: Isolated cofilin bound to an actin filament
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2019-09-13
Authors: Huehn, A.R., Bibeau, J.P., Schramm, A.C., Cao, W., De La Cruz, E.M., Sindelar, C.V.
PDB entry 6ubz: Crystal structure of D678A GoxA bound to glycine at pH 5.5
Classification: OXIDOREDUCTASE
Source organism: Pseudoalteromonas luteoviolacea DSM 6061
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2019-09-13
Authors: Yukl, E.T.
PDB entry 6uc0: Isolated S3D-cofilin bound to an actin filament
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2019-09-13
Authors: Huehn, A.R., Bibeau, J.P., Schramm, A.C., Cao, W., De La Cruz, E.M., Sindelar, C.V.
PDB entry 6uc1: Crystal structure of D678A GoxA soaked in glycine at pH 7.5
Classification: OXIDOREDUCTASE
Source organism: Pseudoalteromonas luteoviolacea DSM 6061
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2019-09-13
Authors: Yukl, E.T.
PDB entry 6uc2: Human IMPDH2 treated with ATP and 2 mM GTP. Free canonical octamer reconstruction.
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.48 Å
Deposited: 2019-09-13
Authors: Johnson, M.C., Kollman, J.M.
PDB entry 6uc3: Spectroscopic and structural characterization of a genetically encoded direct sensor for protein-ligand interactions
Classification: BIOTIN BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2019-09-13
Authors: Mills, J.H., Gleason, P.R., Simmons, C.R., Henderson, J.N., Kartchner, B.K.
PDB entry 6uc4: Barbed end side of a cofilactin cluster
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.2 Å
Deposited: 2019-09-13
Authors: Huehn, A.R., Bibeau, J.P., Schramm, A.C., Cao, W., De La Cruz, E.M., Sindelar, C.V.
PDB entry 6uc5: Fab397 in complex with NPNA peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-09-13
Authors: Pholcharee, T., Oyen, D., Wilson, I.A.
PDB entry 6uc6: Crystal structure of BoNT/B receptor-binding domain in complex with VHH JLI-H11
Classification: HYDROLASE/ANTITOXIN
Source organism: Clostridium botulinum; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32006 Å
Deposited: 2019-09-15
Authors: Lam, K., Jin, R.
PDB entry 6uc7: Structure of guanine riboswitch bound to N2-acetyl guanine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.798 Å
Deposited: 2019-09-15
Authors: Matyjasik, M.M., Batey, R.T.
PDB entry 6uc8: Guanine riboswitch bound to 8-aminoguanine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.898 Å
Deposited: 2019-09-15
Authors: Matyjasik, M.M., Hall, S.D., Batey, R.T.
PDB entry 6uc9: Guanine riboswitch bound to O6-cyclohexylmethyl guanine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.941 Å
Deposited: 2019-09-15
Authors: Matyjasik, M.M., Batey, R.T.
PDB entry 6uca: Crystal structure of human ZCCHC4 in complex with SAH
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.103 Å
Deposited: 2019-09-15
Authors: Lu, J.W., Ren, W.D., Huang, M.J., Gao, L., Li, D.X., Wang, G.G., Song, J.
PDB entry 6ucb: GluA2 in complex with its auxiliary subunit CNIH3 - with antagonist ZK200775, LBD, TMD, CNIH3, and lipids
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2019-09-15
Authors: Nakagawa, T.
PDB entry 6ucc: Structure of human PACRG-MEIG1 complex (limited proteolysis)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-09-16
Authors: Khan, N., Croteau, N., Pelletier, D., Veyron, S., Trempe, J.F.
PDB entry 6ucd: The crystal structure of Staphylococcus aureus super antigen-like protein SSL10
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2019-09-16
Authors: Patel, D., Young, P.G., Bunker, R.D., Baker, E.N., Fraser, J.D.
PDB entry 6uce: N123-VRC34_pI3 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.382 Å
Deposited: 2019-09-16
Authors: Xu, K., Kwong, P.D.
PDB entry 6ucf: N123-VRC34_pI4 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2019-09-16
Authors: Xu, K., Kwong, P.D.
PDB entry 6ucg: Retinoic acid receptor-related orphan receptor (ROR) gamma in complex with allosteric compound 28
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2019-09-16
Authors: Palte, R.L., Parthasarathy, G.
PDB entry 6uch: SMARCB1 nucleosome-interacting C-terminal alpha helix
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2019-09-16
Authors: Valencia, A.M., Sun, Z.Y.J., Seo, H.S., Vangos, H.S., Yeoh, Z.C., Mashtalir, N., Dhe-Paganon, S., Kadoch, C.