LiteFold/PDB huggingface dataset:
PDB entry 6wwk: KIF14[391-755] dimer two-heads-bound state - ADP-AlFx in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwl: KIF14[391-755] dimer two-heads-bound state - AMP-PNP in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwm: KIF14[391-748] - ADP in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwn: KIF14[391-748] - ADP-AlFx in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwo: KIF14[391-748] - AMP-PNP in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwp: Apo KIF14[391-743] in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwq: KIF14[391-743] - ADP in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwr: Kif14[391-743] - ADP-AlFx open state class in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wws: Kif14[391-743] - AMP-PNP open state class in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwt: Apo KIF14[391-735] in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwu: KIF14[391-735] - ADP-AlFx in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwv: KIF14[391-735] - ANP-PNP in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-05-09
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 6wwx: Crystal structure of truncated bacteriophage hyaluronan lyase HylP in complex with unsaturated hyaluronan tetra-saccharides
Classification: LYASE
Source organism: Streptococcus pyogenes phage H4489A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-05-09
Authors: Deivanayagam, C., Schormann, N.
PDB entry 6wwz: Cryo-EM structure of the human chemokine receptor CCR6 in complex with CCL20 and a Go protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2020-05-09
Authors: Wasilko, D.J., Johnson, Z.L., Ammirati, M., Han, S., Wu, H.
PDB entry 6wx1: Antigen Binding Fragment of OKT9
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-05-09
Authors: Rodriguez, J.A., Helguera, G., Sawaya, M., Cascio, D., Collazo, M., Flores, M., Zink, S., Ferrero, S., Payes, C., Fuentes, D., Short, C.
PDB entry 6wx2: Vaccine-elicited mouse FP-targeting neutralizing antibody vFP16.02 with F60P mutation on light chain in complex with HIV fusion peptide (residue 512-519)
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2020-05-09
Authors: Xu, K., Wang, Y., Kwong, P.D.
PDB entry 6wx3: High resolution Tryptophan Synthase crystal structure from Salmonella typhimurium in complex with F9 inhibitor in the alpha-site, Cesium ion at the metal coordination site and internal aldimine form.
Classification: LYASE/LYASE INHIBITOR
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium; Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-05-09
Authors: Hilario, E., Dunn, M.F., Mueller, L.J., Fan, L.
PDB entry 6wx4: Crystal structure of the SARS CoV-2 Papain-like protease in complex with peptide inhibitor VIR251
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.655 Å
Deposited: 2020-05-09
Authors: Lv, Z., Olsen, S.K.
PDB entry 6wx5: Adducts formed after 3 weeks in the reaction of chlorido[chlorido(2,2'-((2-([2,2':6',2''-Terpyridin]-4'-yloxy)ethyl)azanediyl)bis(ethan-1-ol))platinum(II)] with HEWL
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2020-05-09
Authors: Sullivan, M.P., Hartinger, C.G., Goldstone, D.C.
PDB entry 6wx6: Cryo-EM Structure of Human Apoferritin Light Chain Vitrified Using Back-it-up
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2020-05-09
Authors: Tan, Y.Z., Rubinstein, J.L.
PDB entry 6wx7: SOX2 bound to Importin-alpha 2
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-05-09
Authors: Bikshapathi, J., Stewart, M., Forwood, J.K., Aragao, D., Roman, N.
PDB entry 6wx8: SOX2 bound to Importin-alpha 3
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-05-10
Authors: Bikshapathi, J., Stewart, M., Forwood, J.K., Aragao, D., Roman, N.
PDB entry 6wx9: SOX2 bound to Importin-alpha 5
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-05-10
Authors: Bikshapathi, J., Stewart, M., Forwood, J.K., Aragao, D., Roman, N.
PDB entry 6wxa: Crystal structure of truncated Streptococcal bacteriophage hyaluronidase complexed with unsaturated hyaluronan hexa-saccharides
Classification: LYASE
Source organism: Streptococcus pyogenes phage H4489A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-05-10
Authors: Deivanayagam, C., Schormann, N.
PDB entry 6wxb: Cryo-EM Structure of Influenza Hemagglutinin (HA) Trimer Vitrified Using Back-it-up
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-05-10
Authors: Tan, Y.Z., Rubinstein, J.L.
PDB entry 6wxc: Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with potential repurposing drug Tipiracil
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-05-10
Authors: Kim, Y., Maltseva, N., Jedrzejczak, R., Welk, L., Endres, M., Chang, C., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6wxd: SARS-CoV-2 Nsp9 RNA-replicase
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-05-10
Authors: Littler, D.R., Gully, B.S., Riboldi-Tunnicliffe, A., Rossjohn, J.
PDB entry 6wxe: Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Upright conformation
Classification: VIRAL PROTEIN
Source organism: Rotavirus A (strain RVA/Monkey/United States/RRV/1975/G3P5B[3])
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-05-10
Authors: Herrmann, T., Harrison, S.C., Jenni, S.
PDB entry 6wxf: Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Intermediate conformation
Classification: VIRAL PROTEIN
Source organism: Rotavirus A (strain RVA/Monkey/United States/RRV/1975/G3P5B[3])
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2020-05-10
Authors: Herrmann, T., Harrison, S.C., Jenni, S.
PDB entry 6wxg: Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Reversed conformation
Classification: VIRAL PROTEIN
Source organism: Rotavirus A (strain RVA/Monkey/United States/RRV/1975/G3P5B[3])
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-05-10
Authors: Herrmann, T., Harrison, S.C., Jenni, S.
PDB entry 6wxh: Colicin E1 fragment in nanodisc-embedded TolC
Classification: ANTIMICROBIAL PROTEIN
Source organism: Escherichia coli; Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2020-05-10
Authors: Kaelber, J.T., Budiardjo, S.J., Firlar, E., Case, D.A., Ikujuni, A.P., Slusky, J.S.G.
PDB entry 6wxi: Colicin E1 fragment in nanodisc-embedded TolC
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2020-05-10
Authors: Kaelber, J.T., Budiardjo, S.J., Firlar, E., Ikujuni, A.P., Slusky, J.S.G.
PDB entry 6wxj: CSF1R signaling is a regulator of pathogenesis in progressive MS
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2020-05-10
Authors: Liu, J.
PDB entry 6wxk: PHF23 PHD Domain Apo
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-05-11
Authors: Vann, K.R., Zhang, J., Zhang, Y., Kutateladze, T.
PDB entry 6wxl: Cryo-EM structure of the VRC315 clinical trial, vaccine-elicited, human antibody 1D12 in complex with an H7 SH13 HA trimer
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Shanghai/JS01/2013(H7N9))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2020-05-11
Authors: Gorman, J., Kwong, P.D.
PDB entry 6wxm: X-ray crystallographic structure of a beta-hairpin peptide derived from amyloid beta 16-36
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-05-11
Authors: Kreutzer, A.G., Nowick, J.S.
PDB entry 6wxn: EGFR(T790M/V948R) in complex with LN3844
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2020-05-11
Authors: Heppner, D.E., Eck, M.J.
PDB entry 6wxo: De novo TIM barrel-ferredoxin fold fusion homodimer with 2-histidine 2-glutamate centre TFD-HE
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2020-05-11
Authors: Caldwell, S.J., Zeymer, C., Haydon, I.C., Huang, P., Hilvert, D., Baker, D.
PDB entry 6wxp: De novo TIM barrel-ferredoxin fold fusion homodimer with 4-glutamate centre TFD-EE
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-05-11
Authors: Caldwell, S.J., Zeymer, C., Haydon, I.C., Huang, P., Hilvert, D., Baker, D.
PDB entry 6wxq: Crystal structure of CRISPR-associated transcription factor Csa3 complexed with cA4
Classification: TRANSCRIPTION
Source organism: Saccharolobus solfataricus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-05-11
Authors: Xia, P., Dutta, A., Parashar, V.
PDB entry 6wxr: CryoEM structure of mouse DUOX1-DUOXA1 complex in the absence of NADPH
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-05-11
Authors: Sun, J.
PDB entry 6wxu: CryoEM structure of mouse DUOX1-DUOXA1 complex in the dimer-of-dimer state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-05-12
Authors: Sun, J.
PDB entry 6wxv: CryoEM structure of mouse DUOX1-DUOXA1 complex in the presence of NADPH
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-05-12
Authors: Sun, J.
PDB entry 6wxw: crystal structure of apo Card1
Classification: DNA BINDING PROTEIN
Source organism: Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2020-05-12
Authors: Rostol, J., Xie, W., Patel, D.J., Marraffini, L.
PDB entry 6wxx: crystal structure of cA4-activated Card1
Classification: DNA BINDING PROTEIN/RNA
Source organism: Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-05-12
Authors: Rostol, J., Xie, W., Patel, D.J., Marraffini, L.
PDB entry 6wxy: crystal structure of cA6-bound Card1
Classification: DNA BINDING PROTEIN/RNA
Source organism: Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-05-12
Authors: Rostol, J., Xie, W., Patel, D.J., Marraffini, L.
PDB entry 6wxz: CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH Compound-29 A.K.A 7-(1,2-DIPHENYLETHYL)-1H-[1,2,3]TRIAZOLO[4,5-B]PYRIDIN-5-AMINE
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.226 Å
Deposited: 2020-05-12
Authors: Khan, J.A.
PDB entry 6wy0: CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH Compound-40 A.K.A 7-[(1R)-1-phenyl-3-{[(1r,4r)-4-phenylcyclohexyl]amino}propyl]-3H-[1,2,3]triazolo[4,5-b]pyridin-5-amine
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.799 Å
Deposited: 2020-05-12
Authors: Khan, J.A.
PDB entry 6wy1: Crystal structure of an engineered thermostable dengue virus 2 envelope protein dimer
Classification: VIRAL PROTEIN
Source organism: Dengue virus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2020-05-12
Authors: Kudlacek, S.T., Lakshmanane, P., Kuhlman, B.
PDB entry 6wy2: Crystal structure of RNA-10mer: CCGG(N4-methyl-C)GCCGG
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.928 Å
Deposited: 2020-05-12
Authors: Sekula, B., Ruszkowski, M., Mao, S., Haruehanroengra, P., Sheng, J.
PDB entry 6wy3: Crystal structure of RNA-10mer: CCGG(N4,N4-dimethyl-C)GCCGG; P212121 form
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.647 Å
Deposited: 2020-05-12
Authors: Sekula, B., Ruszkowski, M., Mao, S., Haruehanroengra, P., Sheng, J.
PDB entry 6wy4: Crystal Structure of Wild Type Class D beta-lactamase from Clostridium difficile 630
Classification: HYDROLASE
Source organism: Clostridioides difficile (strain 630)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-05-12
Authors: Minasov, G., Shuvalova, L., Dubrovska, I., Rosas-Lemus, M., Jedrzejczak, R., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6wy5: CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH Compound-37 A.K.A 7-(1-phenyl-3-(((1S,3S)-3-phenyl-2,3-dihydro-1H-inden-1-yl)amino)propyl)-1H-[1,2,3]triazolo[4,5-b]pyridin-5-amine
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.898 Å
Deposited: 2020-05-12
Authors: Khan, J.A.
PDB entry 6wy6: Crystal structure of S. cerevisiae Atg8 in complex with Ede1 (1220-1247)
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.773 Å
Deposited: 2020-05-12
Authors: Zheng, Y., Wilfling, F., Baumeister, W., Schulman, B.A.
PDB entry 6wy7: CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH Compound-41 A.K.A 7-[1-phenyl-3-({4-phenylbicyclo[2.2.2]octan-1-yl}amino)propyl]-3H-[1,2,3]triazolo[4,5-b]pyridin-5-amine
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.089 Å
Deposited: 2020-05-12
Authors: Khan, J.A.
PDB entry 6wy8: Tcur3481-Tcur3483 steroid ACAD
Classification: OXIDOREDUCTASE
Source organism: Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NBRC 15933 / NCIMB 10081 / Henssen B9)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-05-12
Authors: Kimber, M.S., Stirling, A.J., Seah, S.Y.K.
PDB entry 6wy9: Tcur3481-Tcur3483 steroid ACAD G363A variant
Classification: OXIDOREDUCTASE
Source organism: Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NBRC 15933 / NCIMB 10081 / Henssen B9)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-05-12
Authors: Kimber, M.S., Stirling, A.J., Seah, S.Y.K.
PDB entry 6wya: RTX (Reverse Transcription Xenopolymerase) in complex with a DNA duplex and dAMPNPP
Classification: TRANSFERASE/DNA
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2020-05-12
Authors: Choi, W.S., He, P., Pothukuchy, A., Gollihar, J., Ellington, A.D., Yang, W.
PDB entry 6wyb: RTX (Reverse Transcription Xenopolymerase) in complex with an RNA/DNA hybrid
Classification: TRANSFERASE/RNA/DNA
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-05-12
Authors: Choi, W.S., He, P., Pothukuchy, A., Gollihar, J., Ellington, A.D., Yang, W.
PDB entry 6wyc: Crystal Structure of Chlamydia trachomatis Glyceraldehyde 3-phosphate dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Chlamydia trachomatis (strain D/UW-3/Cx)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-05-12
Authors: Schormann, N., Chattopadhyay, D.
PDB entry 6wyd: CRYSTAL STRUCTURE OF MYELOPEROXIDASE SUBFORM C (MPO) COMPLEX WITH Compound-12 (AKA; 7-benzyl-1H-[1,2,3]triazolo[4,5-b]pyrid
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2020-05-12
Authors: Khan, J.A.
PDB entry 6wye: Crystal structure of Neisseria gonorrhoeae serine acetyltransferase (CysE)
Classification: TRANSFERASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2020-05-12
Authors: Hicks, J.L., Oldham, K.E., Summers, E.L., Prentice, E.J.
PDB entry 6wyf: Crystal structure of Human H-chain Ferritin variant 157C Delta C-star Modified with a RAFT Agent Soaked in an Acrylate Solution
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-05-12
Authors: Bailey, J.B., Zhang, L.
PDB entry 6wyg: Crystal structure of Human H-chain Ferritin variant 157C Delta C-star Modified with a RAFT agent
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2020-05-12
Authors: Bailey, J.B., Zhang, L.
PDB entry 6wyh: Crystal structure of Human H-chain Ferritin variant 157C Delta C-star Modified with a RAFT Agent Soaked in an Acrylate Solution
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2020-05-12
Authors: Bailey, J.B., Zhang, L.
PDB entry 6wyi: Crystal structure of EchA19, enoyl-CoA hydratase from Mycobacterium tuberculosis
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.915 Å
Deposited: 2020-05-13
Authors: Bonds, A.C., Garcia-Diaz, M., Sampson, N.S.
PDB entry 6wyj: Cryo-EM structure of the GltPh L152C-G321C mutant in the intermediate state
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-05-13
Authors: Font, J., Chen, I., Sobti, M., Stewart, A.G., Ryan, R.M.
PDB entry 6wyk: Cryo-EM structure of the GltPh L152C-G321C mutant in the intermediate chloride conducting state.
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-05-13
Authors: Font, J., Chen, I., Sobti, M., Stewart, A.G., Ryan, R.M.
PDB entry 6wyl: Cryo-EM structure of GltPh L152C-G351C mutant in the intermediate outward-facing state.
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-05-13
Authors: Font, J., Chen, I., Sobti, M., Stewart, A.G., Ryan, R.M.
PDB entry 6wym: Transition metal inhibition and structural refinement of the M. tuberculosis esterase, Rv0045c
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-05-13
Authors: Macbeth, M.R., Johnson, R.J., Hoops, G.C.
PDB entry 6wyn: Transition metal inhibition and structural refinement of the M. tuberculosis esterase, Rv0045c
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2020-05-13
Authors: Macbeth, M.R., Johnson, R.J., Hoops, G.C.
PDB entry 6wyo: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) H82F F202Y double mutant complexed with Trichostatin A
Classification: HYDROLASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-05-13
Authors: Osko, J.D., Christianson, D.W.
PDB entry 6wyp: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant complexed with SAHA-BPyne
Classification: HYDROLASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.40006 Å
Deposited: 2020-05-13
Authors: Osko, J.D., Christianson, D.W.
PDB entry 6wyq: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant complexed with 4-iodo-SAHA
Classification: HYDROLASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.90001 Å
Deposited: 2020-05-13
Authors: Osko, J.D., Christianson, D.W.
PDB entry 6wyr: Crystal structure of anti-Muscle Specific Kinase (MuSK) Fab, MuSK1A
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-05-13
Authors: Vieni, C., Ekiert, D.
PDB entry 6wys: Lon protease proteolytic domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.229 Å
Deposited: 2020-05-13
Authors: Lee, C.C., Spraggon, G.
PDB entry 6wyt: Crystal structure of anti-Muscle Specific Kinase (MuSK) Fab, MuSK1B
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-05-13
Authors: Vieni, C., Ekiert, D.
PDB entry 6wyu: Crystallographic trimer of metal-free TriCyt2
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2020-05-13
Authors: Tezcan, F.A., Kakkis, A.
PDB entry 6wyv: E. coli 50S ribosome bound to compounds 47 and VS1
Classification: RIBOSOME
Source organism: Escherichia coli; Streptomyces virginiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2020-05-13
Authors: Pellegrino, J., Lee, D.J., Fraser, J.S., Seiple, I.B.
PDB entry 6wyw: Crystal structure of Pseudomonas 7A Glutaminase-Asparaginase in complex with L-Asp at pH 4.5
Classification: HYDROLASE
Source organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2020-05-13
Authors: Strzelczyk, P., Zhang, D., Wlodawer, A., Lubkowski, J.
PDB entry 6wyx: Crystal structure of Pseudomonas 7A Glutaminase-Asparaginase in complex with L-Asp at pH 5.0
Classification: HYDROLASE
Source organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2020-05-13
Authors: Strzelczyk, P., Zhang, D., Wlodawer, A., Lubkowski, J.
PDB entry 6wyy: Crystal structure of Pseudomonas 7A Glutaminase-Asparaginase in complex with L-Glu at pH 6.5
Classification: HYDROLASE
Source organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2020-05-13
Authors: Strzelczyk, P., Zhang, D., Wlodawer, A., Lubkowski, J.
PDB entry 6wyz: Crystal structure of Pseudomonas 7A Glutaminase-Asparaginase (mutant K173M) in complex with D-Glu at pH 5.5
Classification: HYDROLASE
Source organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-05-13
Authors: Strzelczyk, P., Zhang, D., Wlodawer, A., Lubkowski, J.
PDB entry 6wz0: Fe-bound structure of an engineered metal-dependent protein trimer, TriCyt2
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-05-13
Authors: Tezcan, F.A., Kakkis, A.
PDB entry 6wz1: Mn-bound structure of an engineered protein trimer, TriCyt3
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.999 Å
Deposited: 2020-05-13
Authors: Tezcan, F.A., Kakkis, A.
PDB entry 6wz2: Co-bound structure of an engineered protein trimer, TriCyt3
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.0006 Å
Deposited: 2020-05-13
Authors: Tezcan, F.A., Kakkis, A.
PDB entry 6wz3: Cu-bound structure of the engineered protein trimer, TriCyt3
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-05-13
Authors: Tezcan, F.A., Kakkis, A.
PDB entry 6wz4: Complex of mutant (K173M) of Pseudomonas 7A Glutaminase-Asparaginase with L-Asp at pH 6. Covalent acyl-enzyme intermediate
Classification: HYDROLASE
Source organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-05-13
Authors: Strzelczyk, P., Zhang, D., Wlodawer, A., Lubkowski, J.
PDB entry 6wz5: Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Classification: GENE REGULATION
Source organism: synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2020-05-13
Authors: Halic, M., Bilokapic, S.
PDB entry 6wz6: Complex of mutant (K173M) of Pseudomonas 7A Glutaminase-Asparaginase with L-Glu at pH 5. Covalent acyl-enzyme intermediate
Classification: HYDROLASE
Source organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2020-05-13
Authors: Strzelczyk, P., Zhang, D., Wlodawer, A., Lubkowski, J.
PDB entry 6wz7: Mn-bound structure of a TriCyt3 variant
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-05-13
Authors: Tezcan, F.A., Kakkis, A.
PDB entry 6wz8: Complex of Pseudomonas 7A Glutaminase-Asparaginase with Citrate Anion at pH 5.5. Covalent Acyl-Enzyme Intermediate
Classification: HYDROLASE
Source organism: Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-05-13
Authors: Strzelczyk, P., Zhang, D., Wlodawer, A., Lubkowski, J.
PDB entry 6wz9: Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Classification: GENE REGULATION
Source organism: synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-05-13
Authors: Halic, M., Bilokapic, S.
PDB entry 6wza: Ni-bound structure of an engineered metal-dependent protein trimer, TriCyt1
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-05-13
Authors: Tezcan, F.A., Kakkis, A.
PDB entry 6wzb: Crystal structure of the GltPh V216C-G388C mutant cross-linked with divalent mercury
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2020-05-13
Authors: Chen, I., Font, J., Ryan, R.
PDB entry 6wzc: Ni-bound structure of an engineered protein trimer, TriCyt3
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.195 Å
Deposited: 2020-05-13
Authors: Tezcan, F.A., Kakkis, A.
PDB entry 6wzg: Human secretin receptor Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2020-05-13
Authors: Piper, S.J., Belousoff, M.J., Danev, R.
PDB entry 6wzj: LY3041658 Fab bound to CXCL2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Macaca fascicularis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2020-05-14
Authors: Durbin, J.D., Druzina, Z.
PDB entry 6wzk: LY3041658 Fab bound to CXCL3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Macaca fascicularis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-05-14
Authors: Durbin, J.D., Druzina, Z.
PDB entry 6wzl: LY3041658 Fab bound to CXCL7
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Macaca fascicularis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2020-05-14
Authors: Durbin, J.D., Druzina, Z.
PDB entry 6wzm: LY3041658 Fab bound to CXCL8
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2020-05-14
Authors: Durbin, J.D., Druzina, Z.
PDB entry 6wzn: Crystal Structure of a Fluorescent Single Chain Fv Chimera
Classification: FLUORESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-05-14
Authors: Close, D., Velappan, N., Hung, L.W., Naranjo, L., Hemez, C., DeVore, N., McCullough, D., Lillo, A.M., Waldo, G., Bradbury, A.R.M.
PDB entry 6wzo: Structure of SARS-CoV-2 Nucleocapsid dimerization domain, P1 form
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2020-05-14
Authors: Ye, Q., Corbett, K.D.
PDB entry 6wzp: The crystal structure of 4-vinylbenzoate-bound T252A mutant CYP199A4
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris (strain HaA2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-05-14
Authors: Coleman, T., Bruning, J.B., Bell, S.G.
PDB entry 6wzq: Structure of SARS-CoV-2 Nucleocapsid dimerization domain, P21 form
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-05-14
Authors: Ye, Q., Corbett, K.D.
PDB entry 6wzr: Fusibacterium ulcerans ZTP riboswitch bound to p-1-pyridinyl AICA
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-05-14
Authors: Pichling, P., Jones, C.P., Ferre-D'Amare, A.R., Tran, B.
PDB entry 6wzs: Fusibacterium ulcerans ZTP riboswitch bound to m-1-pyridinyl AICA
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.23 Å
Deposited: 2020-05-14
Authors: Pichling, P., Jones, C.P., Ferre-D'Amare, A.R., Tran, B.
PDB entry 6wzt: CryoEM structure of influenza hemagglutinin A/Victoria/361/2011 in complex with cyno antibody 3B10
Classification: ANTIVIRAL PROTEIN
Source organism: Influenza A virus; Macaca fascicularis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2020-05-14
Authors: Qiu, Y., Zhou, Y., Darricarrere, N.
PDB entry 6wzu: The crystal structure of Papain-Like Protease of SARS CoV-2 , P3221 space group
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2020-05-14
Authors: Osipiuk, J., Tesar, C., Endres, M., Jedrzejczak, R., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6wzv: Lon protease proteolytic domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2020-05-14
Authors: Lee, C.C., Spraggon, G.
PDB entry 6wzw: Ash1L SET domain in complex with AS-85
Classification: PROTEIN BINDING, TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2020-05-14
Authors: Li, H., Deng, J., Cierpicki, T., Grembecka, J.
PDB entry 6wzx: GID4 in complex with IGLWKS peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-05-14
Authors: Dong, C., Tempel, W., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6wzy: Structure of DbNA(10) peptides bound to H-2Db MHC-I
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-05-14
Authors: Farenc, C., Rossjohn, J.
PDB entry 6wzz: GID4 in complex with VGLWKS peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-05-14
Authors: Dong, C., Tempel, W., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6x00: Structure of DbNA(11) peptides bound to H-2Db MHC-I
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-05-14
Authors: Farenc, C., Rossjohn, J.
PDB entry 6x01: Crystal structure of the GltPh V216C-A391C mutant cross-linked in outward-facing state
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.65 Å
Deposited: 2020-05-15
Authors: Chen, I., Font, J., Ryan, R.
PDB entry 6x02: Nup84-Nup133 (aa521-1157) from S. cerevisiae bound by VHH-SAN8
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 6.38 Å
Deposited: 2020-05-15
Authors: Nordeen, S.A., Schwartz, T.U.
PDB entry 6x03: Nup84-Nup133 (aa521-1157) from S. cerevisiae bound by VHH-SAN8 and VHH-SAN9
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 7.3 Å
Deposited: 2020-05-15
Authors: Nordeen, S.A., Schwartz, T.U.
PDB entry 6x04: Nup133 (aa55-481) from S. cerevisiae bound by VHH-SAN5
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2020-05-15
Authors: Nordeen, S.A., Schwartz, T.U.
PDB entry 6x05: Nup133 (aa55-481) from S. cerevisiae bound by VHH-SAN4
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-05-15
Authors: Nordeen, S.A., Schwartz, T.U.
PDB entry 6x06: Nup120 (aa1-757) from S. cerevisiae bound by VHH-SAN11
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 4.27 Å
Deposited: 2020-05-15
Authors: Knockenhauer, K.E., Nordeen, S.A., Schwartz, T.U.
PDB entry 6x07: Nic96 from S. cerevisiae bound by VHH-SAN12
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-05-15
Authors: Andersen, K., Nordeen, S.A., Schwartz, T.U.
PDB entry 6x08: Nup85-Seh1 from S. cerevisiae bound by VHH-SAN2
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 4.19 Å
Deposited: 2020-05-15
Authors: Nordeen, S.A., Schwartz, T.U.
PDB entry 6x0a: X-ray structure of a chimeric ParDE toxin-antitoxin complex from Mesorhizobium opportunistum
Classification: TOXIN
Source organism: Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-05-15
Authors: Lite, T.L., Grant, R.A., Laub, M.T.
PDB entry 6x0b: Crystal Structure of Thioredoxin NaTrxh from Nicotiana alata
Classification: OXIDOREDUCTASE
Source organism: Nicotiana alata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.702 Å
Deposited: 2020-05-15
Authors: Gonzalez-Segura, L., Torres-Rodriguez, M.D., Cruz-Garcia, F.
PDB entry 6x0c: Tryptophan Synthase mutant beta-Q114A in complex with Cesium ion at the metal coordination site and aminoacrylate and benzimidazole at the enzyme beta site
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-05-15
Authors: Hilario, E., Dunn, M.F., Mueller, L.J., Fan, L.
PDB entry 6x0h: Structure of oxidized SidA ornithine hydroxylase with the FAD in the "out" conformation
Classification: OXIDOREDUCTASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.087 Å
Deposited: 2020-05-15
Authors: Tanner, J.J., Campbell, A.C.
PDB entry 6x0i: Structure of oxidized SidA ornithine hydroxylase with the FAD "in" and complexed with NADP
Classification: OXIDOREDUCTASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-05-15
Authors: Tanner, J.J., Campbell, A.C.
PDB entry 6x0j: Structure of reduced SidA ornithine hydroxylase with the FAD "in" and complexed with NADP and L-ornithine
Classification: OXIDOREDUCTASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.335 Å
Deposited: 2020-05-15
Authors: Tanner, J.J., Campbell, A.C.
PDB entry 6x0k: Structure of dithionite-reduced SidA ornithine hydroxylase with the FAD "in" and complexed with L-ornithine
Classification: OXIDOREDUCTASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.231 Å
Deposited: 2020-05-15
Authors: Tanner, J.J., Campbell, A.C.
PDB entry 6x0l: Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-05-16
Authors: Halic, M., Bilokapic, S.
PDB entry 6x0m: Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Classification: GENE REGULATION
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2020-05-16
Authors: Halic, M., Bilokapic, S.
PDB entry 6x0n: Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Classification: GENE REGULATION
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 10 Å
Deposited: 2020-05-16
Authors: Halic, M., Bilokapic, S.
PDB entry 6x0o: Single-Particle Cryo-EM Structure of Arabinosyltransferase EmbB from Mycobacterium smegmatis
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-05-17
Authors: Tan, Y.Z., Rodrigues, J., Keener, J.E., Zheng, R.B., Brunton, R., Kloss, B., Giacometti, S.I., Rosario, A.L., Zhang, L., Niederweis, M., Clarke, O.B., Lowary, T.L., Marty, M.T., Archer, M., Potter, C.S., Carragher, B., Mancia, F.
PDB entry 6x0p: Ash1L SET domain Q2265A mutant in complex with AS-5
Classification: PROTEIN BINDING, TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2020-05-17
Authors: Rogawski, D.S., Li, H., Borkin, D., Cierpicki, T., Grembecka, J.
PDB entry 6x0q: A Circular Permutant of the Tobacco Mosaic Virus (TMV) mutant Q101H coordinated with heme
Classification: VIRAL PROTEIN
Source organism: Tobacco mosaic virus (strain vulgare)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-05-17
Authors: Dai, J., Knott, G.J., Francis, M.B.
PDB entry 6x0r: A Circular Permutant of the Tobacco Mosaic Virus (TMV) mutant Q101H
Classification: VIRAL PROTEIN
Source organism: Tobacco mosaic virus (strain vulgare)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-05-17
Authors: Dai, J., Knott, G.J., Francis, M.B.
PDB entry 6x0s: Structure of human plasma factor XIIa in complex with (2S)-4-(5-chloro-1,3-benzoxazol-2-yl)-1-(N,3-dicyclohexyl-D-alanyl)-N-[(thiophen-2-yl)methyl]piperazine-2-carboxamide (compound 7)
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.898 Å
Deposited: 2020-05-17
Authors: Orth, P.
PDB entry 6x0t: Structure of human plasma factor XIIa in complex with (2S)-1-(N,3-dicyclohexyl-D-alanyl)-4-[(4R,5S)-4-methyl-5-phenyl-4,5-dihydro-1,3-oxazol-2-yl]-N-[(thiophen-2-yl)methyl]piperazine-2-carboxamide (compound 8h)
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.388 Å
Deposited: 2020-05-17
Authors: Orth, P.
PDB entry 6x0u: Structure of MZT1/GCP3-NHD and MZT1/GCP6-NHD in the gamma-TuRC lumenal bridge
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-05-17
Authors: Wieczorek, M., Huang, T.-L., Urnavicius, L., Hsia, K.-C., Kapoor, T.M.
PDB entry 6x0v: Structure of MZT2/GCP-NHD and CDK5Rap2 at position 13 of the gamma-TuRC
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2020-05-17
Authors: Wieczorek, M., Huang, T.-L., Urnavicius, L., Hsia, K.-C., Kapoor, T.M.
PDB entry 6x10: Crystal structure of acetyltransferase Eis from Mycobacterium tuberculosis in complex with haloperidol
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2020-05-17
Authors: Punetha, A., Garneau-Tsodikova, S., Tsodikov, O.V.
PDB entry 6x11: Observing a ring-cleaving dioxygenase in action through a crystalline lens - an enol tautomer of ACMS monodentately bound structure
Classification: OXIDOREDUCTASE
Source organism: Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.097 Å
Deposited: 2020-05-17
Authors: Wang, Y., Liu, F., Yang, Y., Liu, A.
PDB entry 6x12: Inward-facing Apo-open state of the glutamate transporter homologue GltPh
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2020-05-18
Authors: Wang, X., Boudker, O.
PDB entry 6x13: Inward-facing sodium-bound state of the glutamate transporter homologue GltPh
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2020-05-18
Authors: Wang, X., Boudker, O.
PDB entry 6x14: Inward-facing state of the glutamate transporter homologue GltPh in complex with TFB-TBOA
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2020-05-18
Authors: Wang, X., Boudker, O.
PDB entry 6x15: Inward-facing state of the glutamate transporter homologue GltPh in complex with L-aspartate and sodium ions
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2020-05-18
Authors: Wang, X., Boudker, O.
PDB entry 6x16: Inward-facing state of the glutamate transporter homologue GltPh in complex with TBOA
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2020-05-18
Authors: Wang, X., Boudker, O.
PDB entry 6x17: Outward-facing state of the glutamate transporter homologue GltPh in complex with TBOA
Classification: TRANSPORT PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2020-05-18
Authors: Wang, X., Boudker, O.
PDB entry 6x18: GLP-1 peptide hormone bound to Glucagon-Like peptide-1 (GLP-1) Receptor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2020-05-18
Authors: Belousoff, M.J., Zhang, X., Danev, R.
PDB entry 6x19: Non peptide agonist CHU-128, bound to Glucagon-Like peptide-1 (GLP-1) Receptor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2020-05-18
Authors: Belousoff, M.J., Zhang, X., Danev, R.
PDB entry 6x1a: Non peptide agonist PF-06882961, bound to Glucagon-Like peptide-1 (GLP-1) Receptor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2020-05-18
Authors: Belousoff, M.J., Zhang, X., Danev, R.
PDB entry 6x1b: Crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with the Product Nucleotide GpU.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2020-05-18
Authors: Kim, Y., Maltseva, N., Jedrzejczak, R., Welk, L., Endres, M., Chang, C., Michalska, K., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)