LiteFold/PDB huggingface dataset:
PDB entry 3i8e: Crystal Structure of DDB1 in Complex with the H-Box Motif of WDR42A
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2009-07-09
Authors: Li, T., Robert, E.I., Breugel, P.C.V., Strubin, M., Zheng, N.
PDB entry 3i8n: A domain of a conserved functionally known protein from Vibrio parahaemolyticus RIMD 2210633.
Classification: structural genomics, unknown function
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.145 Å
Deposited: 2009-07-09
Authors: Tan, K., Tesar, C., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3i8o: A domain of a functionally unknown protein from Methanocaldococcus jannaschii DSM 2661.
Classification: RNA BINDING PROTEIN
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.638 Å
Deposited: 2009-07-09
Authors: Tan, K., Chhor, G., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3i8p: Crystal structure of E. coli FabF(C163A) in complex with Platensimycin A1
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-09
Authors: Soisson, S.M., Parthsarathy, G.
PDB entry 3i8r: Crystal structure of the heme oxygenase from Corynebacterium diphtheriae (HmuO) in complex with heme binding ditiothreitol (DTT)
Classification: OXIDOREDUCTASE
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-07-10
Authors: Matsui, T., Unno, M., Ikeda-Saito, M.
PDB entry 3i8s: Structure of the cytosolic domain of E. coli FeoB, nucleotide-free form
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-10
Authors: Petermann, N., Hansen, G., Hogg, T., Hilgenfeld, R.
PDB entry 3i8t: N-terminal CRD1 domain of mouse Galectin-4 in complex with lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-10
Authors: Brynda, J., Krejcirikova, V., Rezacova, P.
PDB entry 3i8u: Crystal structure of PcyA-181,182-dihydrobiliverdin complex
Classification: OXIDOREDUCTASE
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2009-07-10
Authors: Hagiwara, Y., Sugishima, M., Fukuyama, K.
PDB entry 3i8v: Crystal structure of human PDE4a with 4-(3-butoxy-4-methoxyphenyl)methyl-2-imidazolidone
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-07-10
Authors: Cheng, R.K.Y., Crawley, L., Barker, J., Wood, M., Felicetti, B., Whittaker, M.
PDB entry 3i8w: Crystal structure of a metallacarborane inhibitor bound to HIV protease
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-10
Authors: Rezacova, P.
PDB entry 3i8x: Structure of the cytosolic domain of E. coli FeoB, GDP-bound form
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-07-10
Authors: Petermann, N., Hansen, G., Hogg, T., Hilgenfeld, R.
PDB entry 3i8z: Crystal structure of human chromobox homolog 4 (CBX4)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2009-07-10
Authors: Amaya, M.F., Zhihong, L., Loppnau, P., Kozieradzki, I., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Bountra, C., Bochkarev, A., Min, J., Ouyang, H., Structural Genomics Consortium (SGC)
PDB entry 3i90: Crystal structure of human chromobox homolog 6 (CBX6) with H3K27 peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-10
Authors: Amaya, M.F., Ravichandran, M., Loppnau, P., Kozieradzki, I., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Bountra, C., Bochkarev, A., Min, J., Ouyang, H., Structural Genomics Consortium (SGC)
PDB entry 3i91: Crystal structure of human chromobox homolog 8 (CBX8) with H3K9 peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-07-10
Authors: Amaya, M.F., Ravichandran, M., Loppnau, P., Kozieradzki, I., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Bountra, C., Bochkarev, A., Min, J., Ouyang, H., Structural Genomics Consortium (SGC)
PDB entry 3i92: Structure of the cytosolic domain of E. coli FeoB, GppCH2p-bound form
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-07-10
Authors: Petermann, N., Hansen, G., Hogg, T., Hilgenfeld, R.
PDB entry 3i93: Crystal structure of Mycobacterium tuberculosis dUTPase STOP138T mutant
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-10
Authors: Leveles, I., Harmat, V., Lopata, A., Toth, J., Vertessy, B.G.
PDB entry 3i94: Crystal structure of PcyA-biliverdin XIII alpha complex
Classification: OXIDOREDUCTASE
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2009-07-10
Authors: Hagiwara, Y., Sugishima, M., Fukuyama, K.
PDB entry 3i95: Crystal structure of E76Q mutant PcyA-biliverdin complex
Classification: OXIDOREDUCTASE
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-07-10
Authors: Hagiwara, Y., Sugishima, M., Fukuyama, K.
PDB entry 3i96: Ethanolamine Utilization Microcompartment Shell Subunit, EutS
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-07-10
Authors: Tanaka, S., Sawaya, M.R., Yeates, T.O.
PDB entry 3i97: B1 domain of human Neuropilin-1 bound with small molecule EG00229
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-07-10
Authors: Allerston, C.K., Djordjevic, S.
PDB entry 3i98: X-ray crystallographic structure of Inorganic Pyrophosphatase at 298K from archaeon Thermococcus thioreducens
Classification: HYDROLASE
Source organism: Thermococcus Thioreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-07-10
Authors: Hughes, R.C., Coates, L., Meehan, E.J., Ng, J.D.
PDB entry 3i99: The crystal structure of the UDP-N-acetylenolpyruvoylglucosamine reductase from the Vibrio cholerae O1 biovar Tor
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-10
Authors: Zhang, R., Gu, M., Peterson, S., Anderson, W., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3i9a: Crystal structure of human transthyretin variant A25T - #1
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-07-10
Authors: Palmieri, L.C., Freire, J.B.B., Palhano, F.L., Azevedo, E.P.C., Foguel, D., Lima, L.M.T.R.
PDB entry 3i9f: Crystal structure of a putative type 11 methyltransferase from Sulfolobus solfataricus
Classification: TRANSFERASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-10
Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Chang, S., Ozyurt, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i9g: Crystal structure of the LT1009 (SONEPCIZUMAB) antibody Fab fragment in complex with sphingosine-1-phosphate
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-10
Authors: Huxford, T.
PDB entry 3i9h: Crystal structure of a betagamma-crystallin domain from Clostridium beijerinckii
Classification: METAL BINDING PROTEIN
Source organism: Clostridium beijerinckii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-11
Authors: Aravind, P., Sankaranarayanan, R.
PDB entry 3i9i: Crystal structure of human transthyretin variant A25T - #2
Classification: hormone-binding protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-11
Authors: Palmieri, L.C., Freire, J.B.B., Palhano, F.L., Azevedo, E.P.C., Foguel, D., Lima, L.M.T.R.
PDB entry 3i9j: Crystal structure of ADP ribosyl cyclase complexed with a substrate analog and a product nicotinamide
Classification: HYDROLASE
Source organism: Aplysia californica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2009-07-12
Authors: Liu, Q., Graeff, R., Kriksunov, I.A., Jiang, H., Zhang, B., Oppenheimer, N., Lin, H., Potter, B.V.L., Lee, H.C., Hao, Q.
PDB entry 3i9k: Crystal structure of ADP ribosyl cyclase complexed with substrate NAD
Classification: HYDROLASE
Source organism: Aplysia californica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2009-07-12
Authors: Liu, Q., Graeff, R., Kriksunov, I.A., Jiang, H., Zhang, B., Oppenheimer, N., Lin, H., Potter, B.V.L., Lee, H.C., Hao, Q.
PDB entry 3i9l: Crystal structure of ADP ribosyl cyclase complexed with N1-cIDPR
Classification: HYDROLASE
Source organism: APLYSIA CALIFORNICA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-07-12
Authors: Liu, Q., Graeff, R., Kriksunov, I.A., Jiang, H., Zhang, B., Oppenheimer, N., Lin, H., Potter, B.V.L., Lee, H.C., Hao, Q.
PDB entry 3i9m: Crystal structure of human CD38 complexed with an analog ara-2'F-ADPR
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-07-12
Authors: Liu, Q., Graeff, R., Kriksunov, I.A., Jiang, H., Zhang, B., Oppenheimer, N., Lin, H., Potter, B.V.L., Lee, H.C., Hao, Q.
PDB entry 3i9n: Crystal structure of human CD38 complexed with an analog ribo-2'F-ADP ribose
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2009-07-12
Authors: Liu, Q., Graeff, R., Kriksunov, I.A., Jiang, H., Zhang, B., Oppenheimer, N., Lin, H., Potter, B.V.L., Lee, H.C., Hao, Q.
PDB entry 3i9o: Crystal structure of ADP ribosyl cyclase complexed with ribo-2'F-ADP ribose
Classification: HYDROLASE
Source organism: Aplysia californica
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-07-12
Authors: Graeff, R., Liu, Q., Kriksunov, I.A., Kotaka, M., Oppenheimer, N., Hao, Q., Lee, H.C.
PDB entry 3i9p: Crystal structure of human transthyretin - wild type
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-12
Authors: Lima, L.M.T.R., Foguel, D.
PDB entry 3i9q: Crystal Structure of the triple mutant S19G-P20D-R21S of alpha spectrin SH3 domain
Classification: STRUCTURAL PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2009-07-12
Authors: Camara-Artigas, A., Gavira, J.A.
PDB entry 3i9s: Structure from the mobile metagenome of V.cholerae. Integron cassette protein VCH_CASS6
Classification: TRANSFERASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-13
Authors: Deshpande, C.N., Sureshan, V., Harrop, S.J., Boucher, Y., Xu, X., Cui, H., Edwards, A., Savchenko, A., Joachimiak, A., Chang, C., Stokes, H.W., Curmi, P.M.G., Mabbutt, B.C., Midwest Center for Structural Genomics (MCSG)
PDB entry 3i9t: Crystal structure of the rat heme oxygenase (HO-1) in complex with heme binding dithiothreitol (DTT)
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-07-13
Authors: Matsui, T., Unno, M., Ikeda-Saito, M.
PDB entry 3i9u: Crystal structure of the rat heme oxygenase (HO-1) in complex with heme binding dithioerythritol (DTE)
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-07-13
Authors: Matsui, T., Unno, M., Ikeda-Saito, M.
PDB entry 3i9v: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, oxidized, 2 mol/ASU
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-07-13
Authors: Sazanov, L.A., Berrisford, J.M.
PDB entry 3i9w: Crystal structure of the E. coli histidine kinase sensor TorS sensor domain
Classification: TRANSFERASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-07-13
Authors: Moore, J.O., Hendrickson, W.A.
PDB entry 3i9x: Crystal structure of a mutT/nudix family protein from Listeria innocua
Classification: HYDROLASE
Source organism: Listeria innocua
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-13
Authors: Bonanno, J.B., Gilmore, M., Bain, K.T., Miller, S., Romero, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i9y: Crystal structure of the V. parahaemolyticus histidine kinase sensor TorS sensor domain
Classification: TRANSFERASE
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2009-07-13
Authors: Moore, J.O., Hendrickson, W.A.
PDB entry 3i9z: Crystal structure of a metallochaperone with a trinuclear Cu(I) cluster
Classification: CHAPERONE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-13
Authors: Hearnshaw, S.J., Zhou, L., Le Brun, N.E., Hemmings, A.M.
PDB entry 3ia0: Ethanolamine Utilization Microcompartment Shell Subunit, EutS-G39V mutant
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-13
Authors: Tanaka, S., Sawaya, M.R., Yeates, T.O.
PDB entry 3ia1: Crystal structure of thio-disulfide isomerase from Thermus thermophilus
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2009-07-13
Authors: Patskovsky, Y., Toro, R., Freeman, J., Chang, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ia2: Pseudomonas fluorescens esterase complexed to the R-enantiomer of a sulfonate transition state analog
Classification: HYDROLASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-07-13
Authors: Schrag, J.D., Kazlauskas, R.J., Jiang, Y., Morley, K.
PDB entry 3ia3: A cis-proline in alpha-hemoglobin stabilizing Protein directs the structural reorganization of alpha-hemoglobin
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-07-13
Authors: Feng, L., Jeffrey, P.D., Shi, Y.
PDB entry 3ia4: Moritella profunda dihydrofolate reductase (DHFR) in complex with NADPH and methotrexate (MTX)
Classification: OXIDOREDUCTASE
Source organism: Moritella profunda
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-13
Authors: Levy, C.
PDB entry 3ia5: Moritella profunda dihydrofolate reductase (DHFR)
Classification: OXIDOREDUCTASE
Source organism: Moritella profunda
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-13
Authors: Hay, S., Evans, R.M., Levy, C., Wang, X., Loveridge, E.J., Leys, D., Allemann, R.K., Scrutton, N.S.
PDB entry 3ia6: X-ray Crystal structure of the nuclear hormone receptor PPAR-gamma in a complex with a PPAR gamma/alpha dual agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2009-07-13
Authors: Ohren, J.F.
PDB entry 3ia7: Crystal Structure of CalG4, the Calicheamicin Glycosyltransferase
Classification: TRANSFERASE
Source organism: Micromonospora echinospora
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2009-07-13
Authors: Chang, A., Singh, S., Bingman, C.A., Thorson, J.S., Phillips Jr., G.N.
PDB entry 3ia8: The structure of the C-terminal heme nitrobindin domain of THAP domain-containing protein 4 from Homo sapiens
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.792 Å
Deposited: 2009-07-13
Authors: Bianchetti, C.M., Bingman, C.A., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 3ia9: Crystal structure of a chemically synthesized [D25N]HIV-1 protease molecule complexed with MVT-101 reduced isostere inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-07-13
Authors: Torbeev, V.Y., Kent, S.B.H.
PDB entry 3iaa: Crystal Structure of CalG2, Calicheamicin Glycosyltransferase, TDP bound form
Classification: TRANSFERASE
Source organism: Micromonospora echinospora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.505 Å
Deposited: 2009-07-13
Authors: Chang, A., Singh, S., Bingman, C.A., Thorson, J.S., Phillips Jr., G.N.
PDB entry 3iab: Crystal structure of RNase P /RNase MRP proteins Pop6, Pop7 in a complex with the P3 domain of RNase MRP RNA
Classification: HYDROLASE/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-07-13
Authors: Perederina, A., Esakova, O.A., Quan, C., Khanova, E., Krasilnikov, A.S.
PDB entry 3iac: 2.2 Angstrom Crystal Structure of Glucuronate Isomerase from Salmonella typhimurium.
Classification: ISOMERASE
Source organism: Salmonella Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2009-07-13
Authors: Minasov, G., Wawrzak, Z., Skarina, T., Onopriyenko, O., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3iad: Crystal structure of human phosphodiesterase 4D with bound allosteric modulator
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2009-07-13
Authors: Staker, B.L., Burgin Jr., A.B.
PDB entry 3iae: Structure of benzaldehyde lyase A28S mutant with benzoylphosphonate
Classification: LYASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-13
Authors: Brandt, G.S., Petsko, G.A., Ringe, D., McLeish, M.J.
PDB entry 3iaf: Structure of benzaldehyde lyase A28S mutant with monomethyl benzoylphosphonate
Classification: LYASE
Source organism: Pseudomonas fluorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-13
Authors: Brandt, G.S., Petsko, G.A., Ringe, D., McLeish, M.J.
PDB entry 3iag: CSL (RBP-Jk) bound to HES-1 nonconsensus site
Classification: TRANSCRIPTION/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-13
Authors: Friedmann, D.R., Kovall, R.A.
PDB entry 3iah: Crystal Structure of Short Chain Dehydrogenase (yciK) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 in Complex with NADP and Acetate.
Classification: OXIDOREDUCTASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2009-07-14
Authors: Minasov, G., Halavaty, A., Skarina, T., Onopriyenko, O., Peterson, S.N., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3iai: Crystal structure of the catalytic domain of the tumor-associated human carbonic anhydrase IX
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-14
Authors: Alterio, V., Di Fiore, A., De Simone, G.
PDB entry 3iaj: Crystal structure of a betagamma-crystallin domain from Clostridium beijerinckii-in alternate space group I422
Classification: METAL BINDING PROTEIN
Source organism: Clostridium beijerinckii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-14
Authors: Aravind, P., Sankaranarayanan, R.
PDB entry 3iak: Crystal structure of human phosphodiesterase 4d (PDE4d) with papaverine.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-14
Authors: Cheng, R.K.Y., Crawley, L., Barker, J., Wood, M., Felicetti, B., Whittaker, M.
PDB entry 3ial: Giardia lamblia Prolyl-tRNA synthetase in complex with prolyl-adenylate
Classification: LIGASE
Source organism: Giardia lamblia ATCC 50803
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-14
Authors: Larson, E.T., Merritt, E.A., Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
PDB entry 3iam: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, reduced, 2 mol/ASU, with bound NADH
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-07-14
Authors: Sazanov, L.A., Berrisford, J.M.
PDB entry 3ian: Crystal structure of a chitinase from Lactococcus lactis subsp. lactis
Classification: HYDROLASE
Source organism: Lactococcus lactis subsp. lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-07-14
Authors: Bonanno, J.B., Rutter, M., Bain, K.T., Miller, S., Ozyurt, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3iao: Conformational plasticity of the coiled coil domain of BmrR is required for bmr promoter binding-the unliganded structure of BmrR
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-14
Authors: Kumaraswami, M., Newberry, K.J., Brennan, R.G.
PDB entry 3iap: E. coli (lacZ) beta-galactosidase (E416Q)
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-14
Authors: Lo, S., Dugdale, M.L., Jeerh, N., Ku, T., Roth, N.J., Huber, R.E.
PDB entry 3iaq: E. coli (lacz) beta-galactosidase (E416V)
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-07-14
Authors: Lo, S., Dugdale, M.L., Jeerh, N., Ku, T., Roth, N.J., Huber, R.E.
PDB entry 3iar: The crystal structure of human adenosine deaminase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2009-07-14
Authors: Ugochukwu, E., Zhang, Y., Hapka, E., Yue, W.W., Bray, J.E., Muniz, J., Burgess-Brown, N., Chaikuad, A., von Delft, F., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A., Kavanagh, K.L., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 3ias: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, oxidized, 4 mol/ASU, re-refined to 3.15 angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2009-07-14
Authors: Sazanov, L.A., Berrisford, J.M.
PDB entry 3iau: The structure of the processed form of threonine deaminase isoform 2 from Solanum lycopersicum
Classification: LYASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.353 Å
Deposited: 2009-07-14
Authors: Bianchetti, C.M., Bingman, C.A., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 3iav: Propionyl-CoA Carboxylase Beta Subunit, D422V
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-07-14
Authors: Diacovich, L., Arabolaza, A., Shillito, E.M., Lin, T.-W., Mitchell, D.L., Pham, H., Melgar, M.M.
PDB entry 3iaw: Crystal structure of a chemically synthesized 203 amino acid 'covalent dimer' [Gly51;Aib51']HIV-1 protease molecule complexed with MVT-101 reduced isostere inhibitor at 1.6 A resolution
Classification: HYDROLASE/HYDROLASE INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2009-07-14
Authors: Torbeev, V.Y., Kent, S.B.H.
PDB entry 3iax: The crystal structure of the TolB box of Colicin A in complex with TolB reveals important differences in the recruitment of the common TolB translocation portal used by group A colicins
Classification: PROTEIN TRANSPORT
Source organism: Citrobacter freundii; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-15
Authors: Li, C.
PDB entry 3iay: Ternary complex of DNA polymerase delta
Classification: TRANSFERASE/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-15
Authors: Swan, M.K., Aggarwal, A.K.
PDB entry 3iaz: Structural basis of the prevention of NSAID-induced damage of the gastrointestinal tract by C-terminal half (C-lobe) of bovine colostrum protein lactoferrin: Binding and structural studies of the C-lobe complex with aspirin
Classification: METAL BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-15
Authors: Mir, R., Singh, N., Sinha, M., Sharma, S., Kaur, P., Srinivasan, A., Singh, T.P.
PDB entry 3ib0: Structural basis of the prevention of NSAID-induced damage of the gastrointestinal tract by C-terminal half (C-lobe) of bovine colostrum protein lactoferrin: Binding and structural studies of C-lobe complex with diclofenac
Classification: METAL BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-07-15
Authors: Mir, R., Singh, N., Sinha, M., Sharma, S., Kaur, P., Srinivasan, A., Singh, T.P.
PDB entry 3ib1: Structural basis of the prevention of NSAID-induced damage of the gastrointestinal tract by C-terminal half (C-lobe) of bovine colostrum protein lactoferrin: Binding and structural studies of C-lobe complex with indomethacin
Classification: METAL BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-15
Authors: Mir, R., Singh, N., Sinha, M., Sharma, S., Kaur, P., Srinivasan, A., Singh, T.P.
PDB entry 3ib2: structure of the complex of C-terminal half (C-lobe) of bovine lactoferrin with alpha-methyl-4-(2-methylpropyl) benzene acetic acid
Classification: METAL BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2009-07-15
Authors: Mir, R., Vikram, G., Kumar, R.P., Sinha, M., Singh, N., Sharma, S., Kaur, P., Singh, T.P.
PDB entry 3ib3: Crystal Structure of SACOL2612 - CocE/NonD family hydrolase from Staphylococcus aureus
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-07-15
Authors: Domagalski, M.J., Chruszcz, M., Osinski, T., Skarina, T., Onopriyenko, O., Cymborowski, M., Shumilin, I.A., Savchenko, A., Edwards, A., Anderson, W., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3ib4: The double mutant of Beta-2 microglobulin K58P-W60G
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2009-07-15
Authors: Colombo, M., Ricagno, S., Bolognesi, M.
PDB entry 3ib5: Crystal structure of Sex pheromone precursor (YP_536235.1) from LACTOBACILLUS SALIVARIUS SUBSP. SALIVARIUS UCC118 at 1.35 A resolution
Classification: HORMONE
Source organism: Lactobacillus salivarius UCC118
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2009-07-15
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ib6: Crystal structure of an uncharacterized protein from Listeria monocytogenes serotype 4b
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-15
Authors: Bonanno, J.B., Gilmore, M., Bain, K.T., Do, J., Ozyurt, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ib7: Crystal structure of full length Rv0805
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-07-15
Authors: Podobnik, M., Dermol, U.
PDB entry 3ib8: Crystal structure of full length Rv0805 in complex with 5'-AMP
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-15
Authors: Podobnik, M., Dermol, U.
PDB entry 3ib9: Propionyl-CoA Carboxylase Beta Subunit, D422L
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-15
Authors: Diacovich, L., Arabolaza, A., Shillito, E.M., Lin, T.-W., Mitchell, D.L., Pham, H., Melgar, M.M.
PDB entry 3iba: Crystal structure of the complex of Trypanosoma cruzi farnesyl diphosphate synthase with zoledronate, IPP and Mg2+
Classification: TRANSFERASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-15
Authors: Amzel, L.M., Huang, C.H., Gabelli, S.B., Oldfield, E.
PDB entry 3ibb: Propionyl-CoA Carboxylase Beta Subunit, D422A
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2009-07-15
Authors: Diacovich, L., Arabolaza, A., Shillito, E.M., Lin, T.-W., Mitchell, D.L., Pham, H., Melgar, M.M.
PDB entry 3ibc: Crystal Structure of Caspase-7 incomplex with Acetyl-YVAD-CHO
Classification: hydrolase, apoptosis
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2009-07-15
Authors: Agniswamy, J.
PDB entry 3ibd: Crystal structure of a cytochrome P450 2B6 genetic variant in complex with the inhibitor 4-(4-chlorophenyl)imidazole
Classification: Oxidoreductase/Oxidoreductase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-15
Authors: Gay, S.C., Sun, L., Talakad, J.C., Shah, M.B., Stout, D.C., Halpert, J.R.
PDB entry 3ibe: Crystal Structure of a Pyrazolopyrimidine Inhibitor Bound to PI3 Kinase Gamma
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.798 Å
Deposited: 2009-07-15
Authors: Bard, J., Svenson, K.
PDB entry 3ibf: Crystal structure of unliganded caspase-7
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-15
Authors: Agniswamy, J.
PDB entry 3ibg: Crystal structure of Aspergillus fumigatus Get3 with bound ADP
Classification: HYDROLASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-07-15
Authors: Suloway, C.J.M., Chartron, J.W., Zaslaver, M., Clemons Jr., W.M.
PDB entry 3ibh: Crystal structure of Saccharomyces cerevisiae Gtt2 in complex with glutathione
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-15
Authors: Ma, X.X., Jiang, Y.L., He, Y.X., Bao, R., Chen, Y.X., Zhou, C.Z.
PDB entry 3ibi: The crystal structure of the human carbonic anhydrase II in complex with an aliphatic sulfamate inhibitor
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2009-07-16
Authors: Alterio, V., De Simone, G.
PDB entry 3ibj: X-ray structure of PDE2A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2009-07-16
Authors: Pandit, J.
PDB entry 3ibk: Crystal structure of a telomeric RNA quadruplex
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-16
Authors: Collie, G.W., Neidle, S., Parkinson, G.N.
PDB entry 3ibl: The crystal structure of the human carbonic anhydrase II in complex with an aliphatic bis-sulfamate inhibitor
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-07-16
Authors: Alterio, V., De Simone, G.
PDB entry 3ibm: CRYSTAL STRUCTURE OF cupin 2 domain-containing protein Hhal_0468 FROM Halorhodospira halophila
Classification: structural genomics, unknown function
Source organism: Halorhodospira halophila SL1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-16
Authors: Patskovsky, Y., Toro, R., Freeman, J., Miller, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ibn: The crystal structure of the human carbonic anhydrase II in complex with an aliphatic bis-sulfamate inhibitor
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-16
Authors: Alterio, V., De Simone, G.
PDB entry 3ibo: Pseudomonas aeruginosa E2Q/H83Q/T126H-azurin RE(PHEN)(CO)3
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2009-07-16
Authors: Gradinaru, C., Crane, B.R., Sudhamsu, J.
PDB entry 3ibp: The Crystal Structure of the Dimerization Domain of Escherichia coli Structural Maintenance of Chromosomes Protein MukB
Classification: CELL CYCLE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.099 Å
Deposited: 2009-07-16
Authors: Li, Y., Schoeffler, A.J., Berger, J.M., Oakley, M.G.
PDB entry 3ibq: Crystal structure of pyridoxal kinase from Lactobacillus plantarum in complex with ATP
Classification: TRANSFERASE
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-16
Authors: Bagaria, A., Kumaran, D., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ibr: Crystal Structure of P. aeruginosa Bacteriophytochrome Photosensory Core Module Mutant Q188L in the Mixed Pr/Pfr State
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2009-07-16
Authors: Yang, X., Kuk, J., Moffat, K.
PDB entry 3ibs: Crystal structure of conserved hypothetical protein BatB from Bacteroides thetaiotaomicron
Classification: structural genomics, unknown function
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-16
Authors: Hattne, J., Bearden, J., Borek, D., Nakka, C., Sather, A., Joachimiak, A., Otwinowski, Z., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ibt: Structure of 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase (QDO)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-16
Authors: Oakley, A.J.
PDB entry 3ibu: The crystal structure of the human carbonic anhydrase II in complex with an aliphatic sulfamate inhibitor
Classification: LYASE/LYASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2009-07-17
Authors: Alterio, V., De Simone, G.
PDB entry 3ibv: Karyopherin cytosolic state
Classification: RNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-07-17
Authors: Cook, A.G., Fukuhara, N., Jinek, M., Conti, E.
PDB entry 3ibw: Crystal Structure of the ACT domain from GTP pyrophosphokinase of Chlorobium tepidum. Northeast Structural Genomics Consortium Target CtR148A
Classification: TRANSFERASE
Source organism: Chlorobaculum tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2009-07-17
Authors: Vorobiev, S., Su, M., Seetharaman, J., Janjua, J., Xiao, R., Ciccosanti, C., Wang, H., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3ibx: Crystal structure of F47Y variant of TenA (HP1287) from Helicobacter pylori
Classification: HYDROLASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-17
Authors: Barison, N., Cendron, L., Trento, A., Angelini, A., Zanotti, G.
PDB entry 3iby: Structure of cytosolic domain of L. pneumophila FeoB
Classification: TRANSPORT PROTEIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-17
Authors: Petermann, N., Hansen, G., Hilgenfeld, R.
PDB entry 3ibz: Crystal structure of putative tellurium resistant like protein (TerD) from Streptomyces coelicolor A3(2)
Classification: structural genomics, unknown function
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2009-07-17
Authors: Klimecka, M., Chruszcz, M., Cymborowski, M., Xu, X., Cui, H., Joachimiak, A., Edwards, A., Savchenko, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ic0: Crystal Structure of liganded hemoglobin in complex with a potent antisickling agent, INN-298
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-17
Authors: Safo, M.K., Musayev, F.N., Gandhi, A.K., Jorge, P.
PDB entry 3ic1: Crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from Haemophilus influenzae
Classification: HYDROLASE
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-17
Authors: Nocek, B.P., Gillner, D.M., Holz, R.C., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ic2: Crystal Structure of liganded hemoglobin in complex with a potent antisickling agent, INN-266
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-17
Authors: Safo, M.K., Musayev, F.N., Gandhi, A.K., Jorge, P.
PDB entry 3ic3: Structure of a putative pyruvate dehydrogenase from the photosynthetic bacterium Rhodopseudomonas palustrus CGA009
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-17
Authors: Cuff, M.E., Tesar, C., Jedrzejczak, R., Mckinlay, J.B., Harwood, C.S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ic4: The crystal structure of the glutaredoxin(grx-1) from Archaeoglobus fulgidus
Classification: OXIDOREDUCTASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-17
Authors: Zhang, R., Xu, X., Cui, H., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ic5: N-terminal domain of putative saccharopine dehydrogenase from Ruegeria pomeroyi.
Classification: structural genomics, unknown function
Source organism: Ruegeria pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2009-07-17
Authors: Osipiuk, J., Tesar, C., Freeman, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ic6: Crystal structure of putative methylase family protein from Neisseria gonorrhoeae
Classification: structural genomics, unknown function
Source organism: Neisseria gonorrhoeae FA 1090
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2009-07-17
Authors: Chang, C., Marshall, N., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ic7: Crystal Structure of Putative Transcriptional Regulator of GntR Family from Bacteroides thetaiotaomicron
Classification: structural genomics, unknown function
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.819 Å
Deposited: 2009-07-17
Authors: Kim, Y., Sather, A., Tesar, C., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ic8: The Crystal Structure of a GST-like protein from Pseudomonas syringae to 2.4A
Classification: structural genomics, unknown function
Source organism: Pseudomonas syringae pv. tomato
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-17
Authors: Stein, A.J., Chhor, G., Freeman, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ic9: The structure of dihydrolipoamide dehydrogenase from Colwellia psychrerythraea 34H.
Classification: OXIDOREDUCTASE
Source organism: Colwellia psychrerythraea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-07-17
Authors: Tan, K., Rakowski, E., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ica: The crystal structure of the beta subunit of a phenylalanyl-tRNA synthetase from Porphyromonas gingivalis W83
Classification: LIGASE
Source organism: Porphyromonas gingivalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2009-07-17
Authors: Fan, Y., Sather, A., Keigher, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3icb: THE REFINED STRUCTURE OF VITAMIN D-DEPENDENT CALCIUM-BINDING PROTEIN FROM BOVINE INTESTINE. MOLECULAR DETAILS, ION BINDING, AND IMPLICATIONS FOR THE STRUCTURE OF OTHER CALCIUM-BINDING PROTEINS
Classification: CALCIUM-BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 1986-09-09
Authors: Szebenyi, D.M.E., Moffat, K.
PDB entry 3icc: Crystal structure of a putative 3-oxoacyl-(acyl carrier protein) reductase from Bacillus anthracis at 1.87 A resolution
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis str. 'Ames Ancestor'
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2009-07-17
Authors: Hou, J., Chruszcz, M., Zheng, H., Cymborowski, M., Luo, H.-B., Skarina, T., Gordon, S., Savchenko, A., Edwards, A.M., Anderson, W., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 3icd: STRUCTURE OF A BACTERIAL ENZYME REGULATED BY PHOSPHORYLATION, ISOCITRATE DEHYDROGENASE
Classification: OXIDOREDUCTASE (NAD(A)-CHOH(D))
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1989-12-28
Authors: Hurley, J.H., Thorsness, P.E., Ramalingam, V., Helmers, N.H., Koshlandjunior, D.E., Stroud, R.M.
PDB entry 3ice: Rho transcription termination factor bound to RNA and ADP-BeF3
Classification: TRANSCRIPTION REGULATOR/RNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-17
Authors: Thomsen, N.D., Berger, J.M.
PDB entry 3icf: Structure of Protein serine/threonine phosphatase from Saccharomyces cerevisiae with similarity to human phosphatase PP5
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-17
Authors: Singer, A.U., Xu, X., Chang, C., Cui, H., Kagan, O., Edwards, A.M., Joachimiak, A., Yakunin, A.F., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ich: Crystal structure of cyclophilin B at 1.2 A resolution
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2009-07-17
Authors: Kozlov, G., Gehring, K.
PDB entry 3ici: Crystal structure of cyclophilin B in complex with calmegin fragment
Classification: ISOMERASE
Source organism: Canis lupus familiaris; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-17
Authors: Kozlov, G., Gehring, K.
PDB entry 3icj: Crystal structure of an uncharacterized metal-dependent hydrolase from pyrococcus furiosus
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-07-17
Authors: Bonanno, J.B., Patskovsky, Y., Freeman, J., Bain, K.T., Hu, S., Ozyurt, S., Wasserman, S., Sauder, J.M., Raushel, F.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ick: Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with minodronate and isopentenyl disphosphate
Classification: TRANSFERASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-17
Authors: Amzel, L.M., Huang, C.H., Gabelli, S.B., Oldfield, E.
PDB entry 3icl: X-Ray Structure of Protein (EAL/GGDEF domain protein) from M.capsulatus, Northeast Structural Genomics Consortium Target McR174C
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Methylococcus capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-17
Authors: Kuzin, A., Chen, Y., Seetharaman, J., Mao, M., Xiao, R., Ciccosanti, C., Foote, E.L., Wang, H., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3icm: Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with isopentenyl pyrophosphate, Mg2+ and 1-(2-Hydroxy-2,2-bis-phosphono-ethyl)-3-phenyl-pyridinium
Classification: TRANSFERASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-17
Authors: Amzel, L.M., Huang, C.H., Gabelli, S.B., Oldfield, E.
PDB entry 3icn: Trypanosoma cruzi farnesyl diphosphate synthase homodimer in complex with isopentenyl pyrophosphate and 3-Fluoro-1-(2-hydroxy-2,2-bis-phosphono-ethyl)-pyridinium
Classification: TRANSFERASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-17
Authors: Amzel, L.M., Huang, C.H., Gabelli, S.B., Oldfield, E.
PDB entry 3ico: Crystal structure of 6-phosphogluconolactonase from Mycobacterium tuberculosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-07-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3icp: Crystal Structure of UDP-galactose 4-epimerase
Classification: ISOMERASE
Source organism: Pyrobaculum calidifontis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2009-07-18
Authors: Sakuraba, H., Kawai, T., Yoneda, K., Ohshima, T.
PDB entry 3icq: Karyopherin nuclear state
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; Schizosaccharomyces pombe; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-07-18
Authors: Cook, A.G., Fukuhara, N., Jinek, M., Conti, E.
PDB entry 3icr: Crystal structure of oxidized Bacillus anthracis CoADR-RHD
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-18
Authors: Wallen, J.R., Claiborne, A.
PDB entry 3ics: Crystal structure of partially reduced Bacillus anthracis CoADR-RHD
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2009-07-18
Authors: Wallen, J.R., Claiborne, A.
PDB entry 3ict: Crystal structure of reduced Bacillus anthracis CoADR-RHD
Classification: OXIDOREDUCTASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-18
Authors: Wallen, J.R., Claiborne, A.
PDB entry 3icu: Protease-associated domain of the E3 ligase grail
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-18
Authors: Walker, J.R., Yermekbayeva, L., Seitova, A., Weigelt, J., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)