LiteFold/PDB huggingface dataset:
PDB entry 8tt8: Joint Xray/Neutron structure of Macrophage Migration Inhibitory Factor (MIF) Bound to 4-hydroxyphenylpyruvate at room temperature
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2023-08-13
Authors: Schroder, G.C., Meilleur, F., Crichlow, G.V., Lolis, E.J.
PDB entry 8tt9: X-ray structure of Macrophage Migration Inhibitory Factor (MIF) Covalently Bound to 4-hydroxyphenylpyruvate (HPP)
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2023-08-13
Authors: Schroder, G.C., Meilleur, F., Nix, J.C., Crichlow, G.V., Lolis, E.J.
PDB entry 8tta: Structure of retromer VPS29-VPS35 (483-796) complexed with Fam21A repeat 21 (1328-1341)
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.46 Å
Deposited: 2023-08-13
Authors: Chen, K.-E., Guo, Q., Collins, B.M.
PDB entry 8ttb: Cryo-EM structure of the PP2A:B55-ARPP19 complex
Classification: SIGNALING PROTEIN,HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2023-08-13
Authors: Fuller, J.R., Padi, S.K.R., Peti, W., Page, R.
PDB entry 8ttc: Structure of retromer VPS29-VPS35 (483-796) complexed with Fam21A repeat 20 (1289-1302)
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2023-08-13
Authors: Chen, K.-E., Guo, Q., Collins, B.M.
PDB entry 8ttd: Structure of VPS29 complexed with Fam21A repeat 21 (1328-1341)
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.011 Å
Deposited: 2023-08-13
Authors: Chen, K.-E., Guo, Q., Collins, B.M.
PDB entry 8tte: Protonated state of NorA at pH 5.0
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-08-13
Authors: Li, J.P., Li, Y., Koide, A., Kuang, H.H., Torres, V.J., Koide, S., Wang, D.N., Traaseth, N.J.
PDB entry 8ttf: NorA double mutant - E222QD307N at pH 7.5
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2023-08-13
Authors: Li, J.P., Li, Y., Koide, A., Kuang, H.H., Torres, V.J., Koide, S., Wang, D.N., Traaseth, N.J.
PDB entry 8ttg: NorA single mutant - E222Q at pH 7.5
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2023-08-13
Authors: Li, J.P., Li, Y., Koide, A., Kuang, H.H., Torres, V.J., Koide, S., Wang, D.N., Traaseth, N.J.
PDB entry 8tth: NorA single mutant - D307N at pH 7.5
Classification: TRANSPORT PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2023-08-13
Authors: Li, J.P., Li, Y., Koide, A., Kuang, H.H., Torres, V.J., Koide, S., Wang, D.N., Traaseth, N.J.
PDB entry 8tti: Trp-6-Halogenase BorH complexed with FAD and Trp
Classification: FLAVOPROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-08-14
Authors: Lingkon, K., Bellizzi, J.J.
PDB entry 8ttj: Tryptophan-6-halogenase BorH complexed with 6-chlorotryptophan
Classification: FLAVOPROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-08-14
Authors: Lingkon, K., Bellizzi, J.J.
PDB entry 8ttk: Tryptophan-6-halogenase BorH apo structure
Classification: FLAVOPROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-08-14
Authors: Lingkon, K., Bellizzi, J.J.
PDB entry 8ttl: AT8-Phosphomimetic Tau Filaments (Full-length, Cofactor-Free 0N4R Tau S202E, T205E, S208E)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-08-14
Authors: El Mammeri, N., Dregni, A.J., Duan, P., Hong, M.
PDB entry 8ttm: IgG1 Fc Heterodimer combYSelect1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens x Mus musculus hybrid cell line
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2023-08-14
Authors: Azzam, T., Du, J.J., Sundberg, E.J.
PDB entry 8ttn: PHF1-Phosphomimetic Tau Filaments (Full-length, Cofactor-Free 0N4R Tau S396E, S400E, T403E, S404E)
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-08-14
Authors: El Mammeri, N., Dregni, A.J., Duan, P., Hong, M.
PDB entry 8tto: Structure of Hachiman anti-defense 1 (Had1)
Classification: VIRAL PROTEIN
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-14
Authors: Ragucci, A.E., Antine, S.P., Kranzusch, P.J.
PDB entry 8ttp: Crystal structure of class C beta-lactamase from Escherichia coli in complex with avibactam
Classification: HYDROLASE
Source organism: Escherichia coli A35218R
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2023-08-14
Authors: Chang, C., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8ttq: Cryo-EM structure of the inner MKLN1 dimer from an autoinhibited MKLN1 tetramer
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2023-08-14
Authors: Chana, C.K., Keszei, A.F.A., Sicheri, F.
PDB entry 8ttr: CA9 mimic bound to SH7
Classification: LYASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-08-14
Authors: Peat, T.S.
PDB entry 8ttt: Structure of SNX27 FERM complexed with Fam21A repeat 15 (1124-1140)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-08-15
Authors: Guo, Q., Chen, K.-E., Collins, B.M.
PDB entry 8ttu: Structure of SNX27 FERM complexed with Fam21A repeat 19 (1261 - 1274)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2023-08-15
Authors: Guo, Q., Chen, K.-E., Collins, B.M.
PDB entry 8ttv: Structure of SNX27 FERM complexed with Fam21A repeat 20 (1289-1302)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-15
Authors: Guo, Q., Chen, K.-E., Collins, B.M.
PDB entry 8ttw: Cryo-EM structure of BG505 SOSIP.664 HIV-1 Env trimer in complex with temsavir, 8ANC195, and 10-1074
Classification: VIRAL PROTEIN/INHIBITOR/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2023-08-15
Authors: Tolbert, W.D., Pozharski, E., Pazgier, M.
PDB entry 8tty: Crystal structure of monkey TLR7 ectodomain with compound 5
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.101 Å
Deposited: 2023-08-15
Authors: Critton, D.A.
PDB entry 8ttz: Crystal structure of monkey TLR7 ectodomain with compound 20
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2023-08-15
Authors: Critton, D.A.
PDB entry 8tu0: The Capsid of Canine Minute Virus
Classification: VIRUS
Source organism: Canine minute virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-08-15
Authors: Velez, M., Mietzsch, M., McKenna, R.
PDB entry 8tu1: The Capsid of Porcine Bocavirus 1
Classification: VIRUS
Source organism: Porcine bocavirus 1 pig/ZJD/China/2006
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2023-08-15
Authors: Velez, M., Mietzsch, M., McKenna, R.
PDB entry 8tu2: The Capsid of Rat Bocavirus
Classification: VIRUS
Source organism: Rat bocavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2023-08-15
Authors: Velez, M., Mietzsch, M., McKenna, R.
PDB entry 8tu3: Bruton's tyrosine kinase in complex with covalent inhibitor compound 10
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-08-15
Authors: Metrick, C.M.
PDB entry 8tu4: Bruton's tyrosine kinase in complex with covalent inhibitor compound 25
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-08-15
Authors: Metrick, C.M.
PDB entry 8tu5: Bruton's tyrosine kinase in complex with covalent inhibitor compound 27
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-08-15
Authors: Metrick, C.M.
PDB entry 8tu6: CryoEM structure of PI3Kalpha
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-08-15
Authors: Valverde, R., Shi, H., Holliday, M.
PDB entry 8tu7: Cryo-EM structure of Apoferritin collected by EPU on Glacios at 2.5 Angstrom resolution
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-08-15
Authors: Jia, L., Ruben, E.A., Olsen, S.K., Wasmuth, E.V.
PDB entry 8tu8: Cryo-EM structure of Apoferritin collected by SerialEM on Glacios at 2.1 Angstrom resolution
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2023-08-15
Authors: Jia, L., Ruben, E.A., Olsen, S.K., Wasmuth, E.V.
PDB entry 8tu9: Cryo-EM structure of HGSNAT-acetyl-CoA complex at pH 7.5
Classification: TRANSFERASE
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-08-15
Authors: Navratna, V., Kumar, A., Mosalaganti, S.
PDB entry 8tua: Full-length P-Rex1 in complex with inositol 1,3,4,5-tetrakisphosphate (IP4)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-08-15
Authors: Cash, J.N., Tesmer, J.J.G.
PDB entry 8tub: HLA B7:02 with HPNGYKSLSTL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-08-16
Authors: Littler, D.R., Rossjohn, J., Chaurasia, P., Petersen, J.
PDB entry 8tuc: Unphosphorylated CaMKK2 in complex with CC-8977
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-08-16
Authors: Bernard, S.M., Shanmugasundaram, V., D'Agostino, L.
PDB entry 8tud: IgG1 Fc Heterodimer combYSelect2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens x Mus musculus hybrid cell line
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-08-16
Authors: Azzam, T., Du, J.J., Sundberg, E.J.
PDB entry 8tue: Cryo-EM structure of Apoferritin collected by Leginon on Glacios at 2.1 Angstrom resolution
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2023-08-16
Authors: Jia, L., Ruben, E.A., Olsen, S.K., Wasmuth, E.V.
PDB entry 8tuf: Crystal structure of human norovirus RNA-dependent RNA-polymerase
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2023-08-16
Authors: Prasad, B.V.V., Kaundal, S., Sankaran, B.
PDB entry 8tug: Cryo-EM structure of CPD-stalled Pol II in complex with Rad26 (engaged state)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-08-16
Authors: Sarsam, R.D., Lahiri, I., Leschziner, A.E.
PDB entry 8tuh: HLA B7:02 with RPIIRPATL
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.20011 Å
Deposited: 2023-08-16
Authors: Littler, D.R., Rossjohn, J., Chaurasia, P., Petersen, J.
PDB entry 8tui: Crystal structure of Fab-Lirilumab bound to KIR2DL3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-08-16
Authors: Lorig-Roach, N., DuBois, R.M.
PDB entry 8tuk: Alvinella ASCC1 KH and Phosphodiesterase/Ligase Domain
Classification: RNA BINDING PROTEIN
Source organism: Alvinella pompejana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2023-08-16
Authors: Tsutakawa, S.E., Tainer, J.A., Arvai, A.S., Chinnam, N.B.
PDB entry 8tul: Cryo-EM structure of the human MRS2 magnesium channel under Mg2+ condition
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-08-16
Authors: Lai, L.T.F., Balaraman, J., Zhou, F., Matthies, D.
PDB entry 8tum: Type IV pilus from Pseudomonas PAO1 strain
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-08-16
Authors: Thongchol, J., Zhang, J., Zeng, L.
PDB entry 8tun: S. thermodepolymerans KpsM-KpsE in Glycolipid 1 state with rigid body fitted KpsT
Classification: MEMBRANE PROTEIN
Source organism: Caldimonas thermodepolymerans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-08-16
Authors: Kuklewicz, J., Zimmer, J.
PDB entry 8tup: Cryo-EM structure of the human MRS2 magnesium channel under Mg2+-free condition
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-08-16
Authors: Lai, L.T.F., Balaraman, J., Zhou, F., Matthies, D.
PDB entry 8tuq: STL Polyomavirus LTA NLS bound to importin alpha 2
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-17
Authors: Donnelly, C.M., Cross, E.M., Forwood, J.K., Alvisi, G.
PDB entry 8tur: Merkel Cell Polyomavirus LTA bipartite NLS bound to importin alpha 2
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-08-17
Authors: Cross, E.M., Forwood, J.K., Alvisi, G.
PDB entry 8tus: WU Polyomavirus LTA NLS bound to importin alpha 2
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-08-17
Authors: Donnelly, C.M., Cross, E.M., Forwood, J.K., Alvisi, G.
PDB entry 8tut: Merkel Cell Polyomavirus LTA NLSct bound to importin alpha 2
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-08-17
Authors: Cross, E.M., Forwood, J.K., Alvisi, G.
PDB entry 8tuu: MW Polyomavirus LTA bipartite NLS bound to importin alpha 2
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-08-17
Authors: Cross, E.M., Forwood, J.K., Alvisi, G.
PDB entry 8tuv: Merkel Cell Polyomavirus LTA NLSm bound to importin alpha 2
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-08-17
Authors: Cross, E.M., Forwood, J.K., Alvisi, G.
PDB entry 8tuw: Type IV pilus from Pseudomonas PAO1 strain with PP7 Maturation protein
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa PAO1; Pseudomonas phage PP7
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.9 Å
Deposited: 2023-08-17
Authors: Thongchol, J., Zhang, J., Zeng, L.
PDB entry 8tux: Capsid of mature PP7 virion with 3'end region of PP7 genomic RNA
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PP7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-08-17
Authors: Thongchol, J., Zhang, J., Zeng, L.
PDB entry 8tuz: Fab 857-2 in complex with OspA
Classification: IMMUNE SYSTEM
Source organism: Borreliella burgdorferi; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.186 Å
Deposited: 2023-08-17
Authors: Rudolph, M.J., Mantis, N.
PDB entry 8tv0: XptA2 wild type
Classification: TOXIN
Source organism: Xenorhabdus nematophila
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-08-17
Authors: Martin, C.L., Aller, S.G.
PDB entry 8tv1: Structure of the EphA2 LBDCRD bound to FabS1C_L1
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-08-17
Authors: Singer, A.U., Bruce, H.A., Blazer, L., Adams, J.J., Sicheri, F., Sidhu, S.S.
PDB entry 8tv2: Structure of apo FabS1C_L1
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-08-17
Authors: Singer, A.U., Bruce, H.A., Blazer, L., Adams, J.J., Sicheri, F., Sidhu, S.S.
PDB entry 8tv3: Fab 221-5 in complex with OspA
Classification: IMMUNE SYSTEM
Source organism: Borreliella burgdorferi B31; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.312 Å
Deposited: 2023-08-17
Authors: Rudolph, M.J., Mantis, N.
PDB entry 8tv4: NMR structure of temporin L in solution
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-08-17
Authors: McShan, A.C., Jia, R., Halim, M.A.
PDB entry 8tv5: Structure of the EphA2 LBDCRD bound to FabS1CE_L1 in a 2:1 (EphA2 to Fab) ratio
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.6 Å
Deposited: 2023-08-17
Authors: Singer, A.U., Bruce, H.A., Blazer, L., Adams, J.J., Sicheri, F., Sidhu, S.S.
PDB entry 8tv6: SARS-CoV-2 Mac1 in complex with MDOLL-0169
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2023-08-17
Authors: Wazir, S., Maksimainen, M., Lehtio, L.
PDB entry 8tv7: SARS-CoV-2 Mac1 in complex with MDOLL-0229
Classification: VIRAL PROTEIN,HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-08-17
Authors: Wazir, S., Maksimainen, M., Lehtio, L.
PDB entry 8tv8: Crystal structure of nontypeable Haemophilus influenzae SapA
Classification: PEPTIDE BINDING PROTEIN
Source organism: Haemophilus influenzae 86-028NP
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-08-17
Authors: Tanaka, K.J., Buechel, E.R., Rivera, K.G., Pinkett, H.W.
PDB entry 8tv9: Inner Mat-T4P complex
Classification: VIRUS
Source organism: Acinetobacter genomosp. 16BJ; Acinetobacter phage AP205
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.15 Å
Deposited: 2023-08-17
Authors: Meng, R., Xing, Z., Thongchol, J., Zhang, J.
PDB entry 8tva: Outer Mat-T4P complex
Classification: VIRUS
Source organism: Acinetobacter genomosp. 16BJ; Acinetobacter phage AP205
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.55 Å
Deposited: 2023-08-17
Authors: Meng, R., Xing, Z., Thongchol, J., Zhang, J.
PDB entry 8tvb: Ghanaian virus fusion glycoprotein (GhV F)
Classification: VIRAL PROTEIN
Source organism: Henipavirus ghanaense; Thermotoga maritima MSB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-08-17
Authors: Park, Y.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 8tvc: Crystal structure of rA3G-ssDNA-AA
Classification: HYDROLASE/DNA
Source organism: Macaca mulatta; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-08-18
Authors: Yang, H., Pacheco, J.I., Chen, X.S.
PDB entry 8tvd: Fab 221-11 in complex with OspA
Classification: IMMUNE SYSTEM/Membrane Protein
Source organism: Borreliella burgdorferi B31; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.077 Å
Deposited: 2023-08-18
Authors: Rudolph, M.J., Mantis, N.
PDB entry 8tve: Langya henipavirus fusion protein in postfusion state
Classification: VIRAL PROTEIN
Source organism: Langya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-08-18
Authors: Wang, Z., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 8tvf: Langya henipavirus fusion protein in prefusion state
Classification: VIRAL PROTEIN
Source organism: Langya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-08-18
Authors: Wang, Z., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8tvg: Langya henipavirus postfusion F protein in complex with the 4G5 Fab, local refinement of the viral membrane distal region
Classification: VIRAL PROTEIN
Source organism: Langya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-08-18
Authors: Wang, Z., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 8tvh: Langya henipavirus postfusion F protein in complex with 4G5 Fab, local refinement of the viral membrane proximal region
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Langya virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-08-18
Authors: Wang, Z., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 8tvi: Langya Virus G glycoprotein (LayV G) with stabilizing mutations
Classification: VIRAL PROTEIN
Source organism: Langya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-08-18
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8tvj: Fab 227-1 in complex with OspA
Classification: IMMUNE SYSTEM/Membrane Protein
Source organism: Borreliella burgdorferi B31; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.168 Å
Deposited: 2023-08-18
Authors: Rudolph, M.J., Mantis, N.
PDB entry 8tvk: KRAS 1-169 G12C Mutant at 100k
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2023-08-18
Authors: Deck, S.L., Xu, M., Milano, S.K., Aplin, C.
PDB entry 8tvl: Plasminogen binding group A streptococcus M-like protein from AP53 bound to human plasminogen
Classification: BLOOD CLOTTING
Source organism: Streptococcus pyogenes
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-08-18
Authors: Readnour, B.M., Tjia-Fleck, S.K., Castellino, F.J., McCann, N.R.
PDB entry 8tvm: IRAK4 in complex with compound 24
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-08-18
Authors: Metrick, C.M., Chodaparambil, J.V.
PDB entry 8tvn: IRAK4 in complex with compound 23
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-08-18
Authors: Metrick, C.M., Chodaparambil, J.V.
PDB entry 8tvp: Cryo-EM structure of CPD-stalled Pol II in complex with Rad26 (open state)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-08-18
Authors: Sarsam, R.D., Lahiri, I., Leschziner, A.E.
PDB entry 8tvq: Cryo-EM structure of CPD stalled 10-subunit Pol II in complex with Rad26
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2023-08-18
Authors: Sarsam, R.D., Lahiri, I., Leschziner, A.E.
PDB entry 8tvr: In situ cryo-EM structure of bacteriophage P22 tail hub protein: tailspike protein complex at 2.8A resolution
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-08-18
Authors: Iglesias, S., Cingolani, G., Feng-Hou, C.
PDB entry 8tvs: Cryo-EM structure of backtracked Pol II in complex with Rad26
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-08-18
Authors: Sarsam, R.D., Lahiri, I., Leschziner, A.E.
PDB entry 8tvt: Structure of human Cysteine desulfurase Nfs1 with L-propargylglycine bound to active site PLP in complex with ISD11, Acp1 and ISCU2
Classification: TRANSFERASE
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-18
Authors: Cygler, M., Boniecki, M.T.
PDB entry 8tvu: In situ cryo-EM structure of bacteriophage P22 portal protein: head-to-tail protein complex at 3.0A resolution
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-08-18
Authors: Iglesias, S.M., Cingolani, G., Feng-Hou, C.
PDB entry 8tvv: Cryo-EM structure of backtracked Pol II
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-08-18
Authors: Sarsam, R.D., Lahiri, I., Leschziner, A.E.
PDB entry 8tvw: Cryo-EM structure of CPD-stalled Pol II (conformation 1)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-08-18
Authors: Sarsam, R.D., Lahiri, I., Leschziner, A.E.
PDB entry 8tvx: Cryo-EM structure of CPD-stalled Pol II (Conformation 2)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-08-18
Authors: Sarsam, R.D., Lahiri, I., Leschziner, A.E.
PDB entry 8tvy: Cryo-EM structure of CPD lesion containing RNA Polymerase II elongation complex with Rad26 and Elf1 (closed state)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-08-18
Authors: Sarsam, R.D., Lahiri, I., Leschziner, A.E.
PDB entry 8tvz: RNA origami 3-helix tile Traptamer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.94 Å
Deposited: 2023-08-18
Authors: McRae, E.K.S., Vallina, N.S., Andersen, E.S.
PDB entry 8tw0: Crystal Structure of a synthetic ABC heterotrimeric Collagen-like Peptide at 1.53 A
Classification: BIOSYNTHETIC PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2023-08-18
Authors: Miller, M.D., Cole, C.C., Xu, W., Walker, D.R., Hulgan, S.A.H., Pogostin, B.H., Swain, J.W.R., Duella, R., Misiura, M., Wang, X., Kolomeisky, A.B., Phillips Jr., G.N., Hartgerink, J.D.
PDB entry 8tw1: Crystal structure of Lys2972, a phage endolysin targeting Streptococcus thermophilus
Classification: HYDROLASE
Source organism: Streptococcus phage 2972
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2023-08-18
Authors: Zhu, X., Moineau, S., Shi, R.
PDB entry 8tw2: Acinetobacter phage AP205 T=4 VLP
Classification: VIRUS LIKE PARTICLE
Source organism: Acinetobacter phage AP205
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2023-08-19
Authors: Meng, R., Xing, Z., Zhang, J.
PDB entry 8tw3: hMPV fusion protein complexed with single domain antibodies sdHMPV16 and sdHMPV12
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human metapneumovirus A; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-08-19
Authors: Rush, S.A., McLellan, J.S.
PDB entry 8tw4: TCR in nanodisc ND-I
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli str. K-12 substr. MG1655; Homo sapiens; human respiratory syncytial virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-08-20
Authors: Notti, R.Q., Walz, T.
PDB entry 8tw6: TCR in nanodisc ND-II
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli str. K-12 substr. MG1655; Homo sapiens; human respiratory syncytial virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-08-20
Authors: Notti, R.Q., Walz, T.
PDB entry 8tw7: Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA complex in Apo state conformation I
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-08-20
Authors: Yuan, Z., Georgescu, R., O'Donnell, M., Li, H.
PDB entry 8tw8: Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA complex in Apo state conformation I
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-08-20
Authors: Yuan, Z., Georgescu, R., O'Donnell, M., Li, H.
PDB entry 8tw9: Cryo-EM structure of S. cerevisiae PolE-Ctf18-8-1-DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-08-20
Authors: Yuan, Z., Georgescu, R., O'Donnell, M., Li, H.
PDB entry 8twa: Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA-PolE-DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-08-20
Authors: Yuan, Z., Georgescu, R., O'Donnell, M., Li, H.
PDB entry 8twb: Cryo-EM structure of S. cerevisiae Ctf18-RFC-PCNA-DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-08-20
Authors: Yuan, Z., Georgescu, R., O'Donnell, M., Li, H.
PDB entry 8twc: Acinetobacter phage AP205 T=3 VLP
Classification: VIRUS LIKE PARTICLE
Source organism: Acinetobacter phage AP205
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-08-20
Authors: Meng, R., Xing, Z., Zhang, J.
PDB entry 8twd: Structure of IraM-bound RssB
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2023-08-20
Authors: Brugger, C., Deaconescu, A.M.
PDB entry 8twe: Cryo-EM structure of the PP2A:B55-FAM122A complex, B55 body
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2023-08-21
Authors: Fuller, J.R., Padi, S.K.R., Peti, W., Page, R.
PDB entry 8twf: Crystal structure of tetracycline destructase Tet(56-3)
Classification: OXIDOREDUCTASE
Source organism: Legionella massiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-08-21
Authors: Kumar, H., Tang, W.K., Tolia, N.
PDB entry 8twg: Crystal structure of tetracycline destructase Tet(56-2)
Classification: OXIDOREDUCTASE
Source organism: Legionella clemsonensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-08-21
Authors: Kumar, H., Tang, W.K., Tolia, N.
PDB entry 8twh: Crystal structure of (GGGTT)3GGG G-quadruplex in complex with small molecule ligand RHPS4
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2023-08-21
Authors: Yatsunyk, L.A., Martin, K.N., Lam, G.
PDB entry 8twi: Cryo-EM structure of the PP2A:B55-FAM122A complex, PP2Ac body
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2023-08-21
Authors: Fuller, J.R., Padi, S.K.R., Peti, W., Page, R.
PDB entry 8twj: AvrB_R266A bound with UDP
Classification: TRANSFERASE
Source organism: Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-08-21
Authors: Peng, W., Orth, K.
PDB entry 8twk: Cryo-EM structure of Aldolase collected by EPU on Glacios at 2.6 Angstrom resolution
Classification: LYASE
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-08-21
Authors: Jia, L., Ruben, E.A., Olsen, S.K., Wasmuth, E.V.
PDB entry 8twl: Cryo-EM structure of Aldolase collected by SerialEM on Glacios at 2.7 Angstrom resolution
Classification: LYASE
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-08-21
Authors: Jia, L., Ruben, E.A., Olsen, S.K., Wasmuth, E.V.
PDB entry 8twm: Cryo-EM structure of Aldolase collected by Leginon on Glacios at 2.6 Angstrom resolution
Classification: LYASE
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-08-21
Authors: Jia, L., Ruben, E.A., Olsen, S.K., Wasmuth, E.V.
PDB entry 8twn: Crystal structure of nitrile synthase AetD with substrate bound
Classification: OXIDOREDUCTASE
Source organism: Aetokthonos hydrillicola
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2023-08-21
Authors: Ye, N., Drennan, C.L.
PDB entry 8two: AvrB bound with UDP and RIN4_T166-Rha
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana; Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2023-08-21
Authors: Peng, W., Orth, K.
PDB entry 8twp: Influenza A virus (A/Aichi/2/1968(H3N2) nucleoprotein mutant - 2-7 deleted, R416A
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Aichi/2/1968(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-08-21
Authors: Yoon, J., Zhang, Y.M., Grant, R.A., Shoulders, M.D.
PDB entry 8twq: Structure of bacteriophage lambda RexA protein
Classification: DNA BINDING PROTEIN
Source organism: Lambdavirus lambda
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-08-21
Authors: Adams, M.C., Chappie, J.S., Schiltz, C.J.
PDB entry 8twr: Influenza A virus (A/Aichi/2/1968(H3N2) nucleoprotein mutant - 2-7 deleted, P283S, R416A
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Aichi/2/1968(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2023-08-21
Authors: Yoon, J., Zhang, Y.M., Grant, R.A., Shoulders, M.D.
PDB entry 8tws: AvrB bound with UDP-rhamnose and RIN4 C-NOI motif
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana; Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-08-21
Authors: Peng, W., Orth, K.
PDB entry 8twt: Crystal structure of nitrile synthase AetD with substrate bound and cofactor partially assembled
Classification: OXIDOREDUCTASE
Source organism: Aetokthonos hydrillicola
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-08-21
Authors: Ye, N., Drennan, C.L.
PDB entry 8twu: Crystal structure of Cytochrome P450 AspB bound to N1-methylated cyclo-L-Trp-L-Pro
Classification: OXIDOREDUCTASE
Source organism: Streptomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2023-08-21
Authors: Gering, H.E., Li, X., Tang, H., Swartz, P.D., Chang, W.-C., Makris, T.M.
PDB entry 8twv: ELIC5 with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG
Classification: TRANSPORT PROTEIN
Source organism: Dickeya dadantii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-08-21
Authors: Dalal, V., Arcario, M.J., Petroff II, J.T., Deitzen, N.M., Tan, B.K., Brannigan, G., Cheng, W.W.L.
PDB entry 8tww: Crystal structure of nitrile synthase AetD with substrate bound and cofactor fully assembled
Classification: OXIDOREDUCTASE
Source organism: Aetokthonos hydrillicola
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-21
Authors: Ye, N., Drennan, C.L.
PDB entry 8twx: Synthesis and Evaluation of Diaryl Ether Modulators of the Leukotriene A4 Hydrolase Aminopeptidase Activity
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-08-21
Authors: Lee, K.H., Lee, S.H., Paige, M., Noble, S.M.
PDB entry 8twy: Structure of p110 alpha bound to (S)-1-(4-((2-(4-(4-(2-amino-4-(difluoromethyl)pyrimidin-5-yl)-6-(3-methylmorpholino)-1,3,5- triazin-2-yl)piperazin-1-yl)-2-oxoethoxy)methyl)piperidin-1-yl)prop-2-en-1-one (compound 9)
Classification: TRANSFERASE/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2023-08-21
Authors: Burke, J.E., Barlow-Busch, I.
PDB entry 8twz: ELIC with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG
Classification: TRANSPORT PROTEIN
Source organism: Dickeya dadantii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-08-21
Authors: Dalal, V., Arcario, M.J., Petroff II, J.T., Deitzen, N.M., Tan, B.K., Brannigan, G., Cheng, W.W.L.
PDB entry 8tx0: IRAK4 in complex with compound
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-21
Authors: Metrick, C.M., Chodaparambil, J.V.
PDB entry 8tx1: Characterization of the Chlamydomonas Flagellar Mastigoneme Filament Structure at 3.6A
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2023-08-22
Authors: Yue, W., Kai, Z.
PDB entry 8tx3: Fab 3864-6 in complex with influenza HA H3-VIC11
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Influenza A virus (A/Victoria/361/2011(H3N2))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-08-22
Authors: Morano, N.C., Shapiro, L.
PDB entry 8tx4: Crystal Structure of rA3G-ssDNA-GA
Classification: HYDROLASE/DNA
Source organism: Macaca mulatta; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-08-22
Authors: Yang, H., Pacheco, J.I., Chen, X.S.
PDB entry 8tx5: Crystal structure of an engineered variant of galactose oxidase, GOaseRd4BB, from Fusarium graminearum
Classification: OXIDOREDUCTASE
Source organism: Fusarium graminearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-08-22
Authors: Selvaraj, B., Orth, P.
PDB entry 8tx6: Crystal structure of an engineered variant of galactose oxidase, GOaseRd7BB, from Fusarium graminearum
Classification: OXIDOREDUCTASE
Source organism: Fusarium graminearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-08-22
Authors: Selvaraj, B., Orth, P.
PDB entry 8tx8: Crystal Structure of RBBP4 bound to ZNF512B peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-08-22
Authors: Deshpande, C.N., Mackay, J.P.
PDB entry 8tx9: Nan Regulatory Protein (core isomerase domain) from Streptococcus pneumoniae
Classification: TRANSCRIPTION
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2023-08-23
Authors: Wood, D.M., Horne, C.R., Panjikar, S., Dobson, R.C.J.
PDB entry 8txa: Apo Structure of (N1G37) tRNA Methyltransferase from Mycobacterium marinum
Classification: TRANSFERASE
Source organism: Mycobacterium marinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.591 Å
Deposited: 2023-08-23
Authors: Balsamo, A., Bruno, C., Edele, C., Fabian, T., Jannotta, R., Lee, R., Schryver, D., Warsaw, J., Warsaw, L., Stojanoff, V., Battaile, K., Perez, A., Bolen, R.
PDB entry 8txb: Characterization of the Chlamydomonas Flagellar Mastigoneme Filament Structure at 3.9A
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-08-23
Authors: Yue, W., Kai, Z.
PDB entry 8txc: Characterization of the Chlamydomonas Flagellar Mastigoneme Filament Subunit MST1 Structure at 3.9 angstrom
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-08-23
Authors: Yue, W., Kai, Z.
PDB entry 8txe: Crystal structure of KRAS G12D in complex with GDP and compound 5
Classification: ONCOPROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-08-23
Authors: Chen, P., Irimia, A., Yang, Z.
PDB entry 8txf: AvrB bound with RIN4 C-NOI motif
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana; Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2023-08-23
Authors: Peng, W., Orth, K.
PDB entry 8txg: Crystal structure of KRAS G12D in complex with GDP and compound 8
Classification: ONCOPROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-08-23
Authors: Chen, P., Irimia, A., Yang, Z.
PDB entry 8txh: Crystal structure of KRAS G12D in complex with GDP and compound 14
Classification: ONCOPROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-08-23
Authors: Chen, P., Irimia, A., Yang, Z.
PDB entry 8txj: KRAS 1-169 G12C Mutant at 277k
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-08-23
Authors: Deck, S.L., Xu, M., Milano, S.K., Aplin, C.
PDB entry 8txk: KRAS 1-169 G12C Mutant at 240k
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2023-08-23
Authors: Deck, S.L., Xu, M., Milano, S.K., Aplin, C.
PDB entry 8txl: Nan Regulatory Protein full length mutant R148A
Classification: TRANSCRIPTION
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-08-23
Authors: Wood, D.M., Horne, C.R., Dobson, R.C.J.
PDB entry 8txm: Crystal structure of 05.GC.w13.02 Fab in complex with H1 HA from A/California/04/2009(H1N1)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (strain swl A/California/04/2009 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2023-08-23
Authors: Lin, T.H., Moore, N., Wilson, I.A.
PDB entry 8txn: Adaptive mechanism of collagen IV scaffold assembly in Drosophila: crystal structure of recombinant NC1 hexamer
Classification: STRUCTURAL PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-08-23
Authors: Boudko, S.P.
PDB entry 8txo: E. coli DNA-directed RNA polymerase transcription elongation complex bound to the unnatural dZ-PTP base pair in the active site
Classification: TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-08-23
Authors: Aiyer, S., Shan, Z., Oh, J., Wang, D., Tan, Y.Z., Lyumkis, D.
PDB entry 8txp: Crystal structure of 05.GC.w13.01 Fab in complex with H1 HA from A/California/04/2009(H1N1)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2023-08-24
Authors: Lin, T.H., Moore, N., Wilson, I.A.
PDB entry 8txq: CryoEM structure of non-neutralizing antibody CBH-4B in complex with Hepatitis C virus envelope glycoprotein E2
Classification: ANTIVIRAL PROTEIN
Source organism: Hepatitis C virus (isolate 1); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-08-24
Authors: Shahid, S., Liqun, J., Liu, Y., Hasan, S.S., Mariuzza, R.A.
PDB entry 8txr: E. coli ExoVII(H238A)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-08-24
Authors: Liu, C., Berger, J.M.
PDB entry 8txs: Solution NMR structure of designed peptide BH26 (RGVTVPHNGESKDYSV)
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-08-24
Authors: McShan, A.C., Torres, M.P.
PDB entry 8txt: Crystal structure of 05.GC.w13.02 Fab in complex with H5 HA from A/Viet Nam/1203/2004(H5N1)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Viet Nam/1203/2004(H5N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2023-08-24
Authors: Lin, T.H., Moore, N., Wilson, I.A.
PDB entry 8txu: Fab 3864-10 in complex with influenza HA H3-SING16
Classification: ANTIVIRAL PROTEIN
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-08-24
Authors: Morano, N.C., Shapiro, L.
PDB entry 8txv: Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A K15 in complex with RNF168 (Class 1)
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-08-24
Authors: Hu, Q., Botuyan, M.V., Zhao, D., Cui, G., Mer, G.
PDB entry 8txw: Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A K15 in complex with RNF168 (Class 2)
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-08-24
Authors: Hu, Q., Botuyan, M.V., Zhao, D., Cui, G., Mer, G.
PDB entry 8txx: Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A K15 in complex with RNF168 (Class 3)
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-08-24
Authors: Hu, Q., Botuyan, M.V., Zhao, D., Cui, G., Mer, G.
PDB entry 8txy: X-ray crystal structure of JRD-SIK1/2i-3 bound to a MARK2-SIK2 chimera
Classification: BIOSYNTHETIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-08-24
Authors: Raymond, D.D., Lemke, C.T., Shaffer, P.L., Collins, B., Steele, R., Seierstad, M.
PDB entry 8txz: Structure of C-terminal LRRK2 bound to MLi-2
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-08-24
Authors: Sanz-Murillo, M., Villagran-Suarez, A., Alegrio-Louro, J., Leschziner, A.
PDB entry 8ty0: Streptavidin variant S112E-K121H bound to bis-biotinylated Iron-porphyrin
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces avidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-08-24
Authors: Follmer, A.H., Jakob, R.P., Mukherjee, M., Ward, T.R.
PDB entry 8ty1: Cryo-EM structure of coagulation factor VIII bound to NB2E9
Classification: BLOOD CLOTTING/INHIBITOR
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2023-08-24
Authors: Childers, K.C., Spiegel, P.C.
PDB entry 8ty2: KRAS 1-169 G12C Mutant at 293k
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2023-08-24
Authors: Deck, S.L., Xu, M., Milano, S.K., Aplin, C.
PDB entry 8ty3: MI-31 ligand bound to SARS-CoV-2 Mpro
Classification: VIRAL PROTEIN, Hydrolase/Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-08-24
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 8ty4: MI-30 bound to Mpro of SARS-CoV-2
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-08-24
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 8ty5: MI-14 bound to Mpro of SARS-CoV-2
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-08-24
Authors: Blankenship, L.R., Liu, W.R.