LiteFold/PDB huggingface dataset:
PDB entry 7lfd: Fab 7D6 bound to ApoL1 BH3 like peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.157 Å
Deposited: 2021-01-16
Authors: Ultsch, M., Kirchhofer, D.
PDB entry 7lfe: SARS-CoV-2 Main protease immature form - F2X Entry Library E03 fragment
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2021-01-16
Authors: Noske, G.D., Nakamura, A.M., Gawriljuk, V.O., Lima, G.M.A., Zeri, A.C.M., Nascimento, A.F.Z., Oliva, G., Godoy, A.S.
PDB entry 7lff: Crystal structure of the Candida albicans kinesin-8 motor domain
Classification: MOTOR PROTEIN
Source organism: Candida albicans (strain SC5314 / ATCC MYA-2876)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2021-01-16
Authors: Allingham, J.S., Hunter, B.
PDB entry 7lfg: X-ray radiation damage series on Thaumatin at 277K, crystal structure, dataset 1
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2021-01-17
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lfh: Cryo-EM structure of NLRP3 double-ring cage, 6-fold (12-mer)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2021-01-17
Authors: Andreeva, L., Rawson, S., Wu, H.
PDB entry 7lfi: MODEL OF MHC CLASS Ib H2-M3 WITH MOUSE ND1 N-TERMINAL HEPTAPEPTIDE REFINED AT 1.70 ANGSTROMS RESOLUTION
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-01-17
Authors: Tomchick, D.R., Deisenhofer, J., Shen, S.
PDB entry 7lfj: MODEL OF MHC CLASS Ib H2-M3 WITH MOUSE ND1 N-TERMINAL HEPTAPEPTIDE, ALA MUTANT, REFINED AT 1.70 ANGSTROMS RESOLUTION
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-01-17
Authors: Tomchick, D.R., Deisenhofer, J., Shen, S.
PDB entry 7lfk: MODEL OF MHC CLASS Ib H2-M3 WITH MOUSE ND1 N-TERMINAL HEPTAPEPTIDE, THR MUTANT, REFINED AT 1.60 ANGSTROMS RESOLUTION
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-17
Authors: Tomchick, D.R., Deisenhofer, J., Shen, S.
PDB entry 7lfl: MODEL OF MHC CLASS Ib H2-M3 WITH MOUSE ND1 N-TERMINAL HEPTAPEPTIDE, VAL MUTANT, MONOCLINIC CELL, REFINED AT 1.60 ANGSTROMS RESOLUTION
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-17
Authors: Tomchick, D.R., Deisenhofer, J., Shen, S.
PDB entry 7lfm: MODEL OF MHC CLASS Ib H2-M3 WITH MOUSE ND1 N-TERMINAL HEPTAPEPTIDE, VAL MUTANT, TRICLINIC CELL, REFINED AT 1.60 ANGSTROMS RESOLUTION
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-17
Authors: Tomchick, D.R., Deisenhofer, J., Shen, S.
PDB entry 7lfn: Structure of Hyperglycosylated Human IgG1 Fc (Fc267_329)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-01-17
Authors: Fields, J.K., Sundberg, E.J.
PDB entry 7lfo: Protein Tyrosine Phosphatase 1B
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2021-01-18
Authors: Sarkar, A., Kim, E.Y., Hongdusit, A., Sankaran, B., Fox, J.M.
PDB entry 7lfp: SARS-CoV-2 Main protease immature form - F2X Entry Library G05 fragment
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-01-18
Authors: Noske, G.D., Nakamura, A.M., Gawriljuk, V.O., Lima, G.M.A., Zeri, A.C.M., Nascimento, A.F.Z., Oliva, G., Godoy, A.S.
PDB entry 7lfq: Pyrococcus RNA ligase
Classification: LIGASE/DNA
Source organism: Pyrococcus horikoshii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-01-18
Authors: Goldgur, Y., Shuman, S., Banerjee, A.
PDB entry 7lfr: Crystal structure of the epidermal growth factor receptor extracellular region with R84K mutation in complex with epiregulin crystallized with spermine
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-01-18
Authors: Hu, C., Leche II, C.A., Stayrook, S.E., Ferguson, K.M., Lemmon, M.A.
PDB entry 7lfs: Crystal structure of the epidermal growth factor receptor extracellular region with A265V mutation in complex with epiregulin
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2021-01-18
Authors: Hu, C., Leche II, C.A., Stayrook, S.E., Ferguson, K.M., Lemmon, M.A.
PDB entry 7lft: Cryo-EM structure of human Apo CNGA1 channel in K+/Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-01-18
Authors: Xue, J., Han, Y., Jiang, Y.
PDB entry 7lfu: Crystal structure of the SARS CoV-1 Papain-like protease in complex with peptide inhibitor VIR250
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2021-01-18
Authors: Olsen, S.K., Lv, Z.
PDB entry 7lfv: Crystal structure of the SARS CoV-1 Papain-like protease in complex with peptide inhibitor VIR251
Classification: Hydrolase/Hydrolas Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2021-01-18
Authors: Olsen, S.K., Lv, Z.
PDB entry 7lfw: Cryo-EM structure of human cGMP-bound open CNGA1 channel in K+/Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-01-18
Authors: Xue, J., Han, Y., Jiang, Y.
PDB entry 7lfx: Cryo-EM structure of human cGMP-bound open CNGA1 channel in Na+/Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-01-19
Authors: Xue, J., Han, Y., Jiang, Y.
PDB entry 7lfy: Cryo-EM structure of human cGMP-bound open CNGA1 channel in Na+
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-01-19
Authors: Xue, J., Han, Y., Jiang, Y.
PDB entry 7lfz: Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope IPRRNVATL
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-01-19
Authors: Patskovska, L., Patskovsky, Y., Krogsgaard, M.
PDB entry 7lg0: Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope SPRWYFYYL
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-01-19
Authors: Patskovska, L., Patskovsky, Y., Krogsgaard, M.
PDB entry 7lg1: Cryo-EM structure of human cGMP-bound CNGA1_E365Q channel in Na+/Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-01-19
Authors: Xue, J., Han, Y., Jiang, Y.
PDB entry 7lg2: Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope ALWEIQQVV
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-01-19
Authors: Patskovska, L., Patskovsky, Y., Krogsgaard, M.
PDB entry 7lg3: Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope KLWAQCVQL
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-01-19
Authors: Patskovska, L., Patskovsky, Y., Krogsgaard, M.
PDB entry 7lg4: Green fluorescent protein from Aequorea macrodactyla - amacGFP
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea macrodactyla
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2021-01-19
Authors: Bozhanova, N.G., Meiler, J.
PDB entry 7lg5: Synechocystis sp. UTEX2470 Cyanophycin synthetase 1 with ATP
Classification: LIGASE
Source organism: Synechocystis sp. (strain PCC 6714)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2021-01-19
Authors: Sharon, I., Schmeing, T.M.
PDB entry 7lg6: BG505 SOSIP.v5.2 in complex with VRC40.01 and RM19R Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2021-01-19
Authors: Cottrell, C.A., Torres, J.L., Wu, N.R., Ward, A.B.
PDB entry 7lg7: Crystal structure of CoV-2 Nsp3 Macrodomain complex with PARG345
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-01-19
Authors: Arvai, A., Brosey, C.A., Bommagani, S., Link, T., Jones, D.E., Ahmed, Z., Tainer, J.A.
PDB entry 7lg8: EGFR (T79M/V948R) in complex with naquotinib and an allosteric inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.93 Å
Deposited: 2021-01-19
Authors: Beyett, T.S., Eck, M.J.
PDB entry 7lg9: ChsB1
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2021-01-19
Authors: Yuan, T., Werman, J.M., Yin, X., Yang, M., Garcia-Diaz, M., Sampson, N.S.
PDB entry 7lga: PEG10 CA-like C-terminal domain
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-01-19
Authors: Zurowska, K., Pornillos, O., Ganser-Pornillos, B.K.
PDB entry 7lgb: ChsB1 in complex with NAD+
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2021-01-19
Authors: Yuan, T., Werman, J.M., Yin, X., Yang, M., Garcia-Diaz, M., Sampson, N.S.
PDB entry 7lgc: MOAP1 CA-like C-terminal domain
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-01-20
Authors: Zurowska, K., Pornillos, O., Ganser-Pornillos, B.K.
PDB entry 7lgd: HLA-B*07:02 in complex with SARS-CoV-2 nucleocapsid peptide N105-113
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2021-01-20
Authors: Gras, S., Szeto, C., Chatzileontiadou, D.S.M.
PDB entry 7lge: Asymmetric unit for phage Qbeta T=4 particle
Classification: VIRUS LIKE PARTICLE
Source organism: Escherichia phage Qbeta
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2021-01-20
Authors: Chang, J.Y., Zhang, J.
PDB entry 7lgf: Asymmetric unit for phage Qbeta prolate particle
Classification: VIRUS LIKE PARTICLE
Source organism: Escherichia phage Qbeta
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2021-01-20
Authors: Chang, J.Y., Zhang, J.
PDB entry 7lgg: Asymmetric unit for phage Qbeta oblate particle
Classification: VIRUS LIKE PARTICLE
Source organism: Escherichia phage Qbeta
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2021-01-20
Authors: Chang, J.Y., Zhang, J.
PDB entry 7lgh: Asymmetric unit for phage Qbeta small prolate particle
Classification: VIRUS LIKE PARTICLE
Source organism: Escherichia phage Qbeta
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.9 Å
Deposited: 2021-01-20
Authors: Chang, J.Y., Zhang, J.
PDB entry 7lgi: The haddock model of GDP KRas in complex with promazine using chemical shift perturbations and intermolecular NOEs
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-01-20
Authors: Wang, X., Gorfe, A.A., Putkey, J.A.
PDB entry 7lgj: Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 with ADPCP and 8x(Asp-Arg)-NH2
Classification: LIGASE
Source organism: Synechocystis sp. (strain PCC 6714); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2021-01-20
Authors: Sharon, I., Grogg, M., Hilvert, D., Schmeing, T.M.
PDB entry 7lgk: Crystal structure of soluble guanylate cyclase activator runcaciguat (BAY 1101042) bound to nostoc H-NOX domain
Classification: SIGNALING PROTEIN/ACTIVATOR
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-01-20
Authors: van den Akker, F., Kumar, V., Schaefer, M.
PDB entry 7lgl: Structural characterization of two b-KTx scorpion toxins. One of them blocks human KCNQ1 potassium channels
Classification: TOXIN
Source organism: Tityus costatus
Experimental method: SOLUTION NMR
Deposited: 2021-01-20
Authors: del Rio-Portilla, F., Lopez-Giraldo, A.E.
PDB entry 7lgm: Cyanophycin synthetase from A. baylyi DSM587 with ATP
Classification: LIGASE
Source organism: Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2021-01-20
Authors: Sharon, I., Haque, A.S., Lahiri, I., Leschziner, A., Schmeing, T.M.
PDB entry 7lgn: Cyanophycin synthetase 1 from T. morbirosei
Classification: LIGASE
Source organism: Tatumella morbirosei
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2021-01-20
Authors: Sharon, I., Schmeing, T.M.
PDB entry 7lgo: Crystal structure of the nucleic acid binding domain (NAB) of Nsp3 from SARS-CoV-2
Classification: RNA BINDING PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-01-20
Authors: Stogios, P.J., Skarina, T., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7lgp: DapE enzyme from Shigella flexneri
Classification: HYDROLASE
Source organism: Shigella flexneri 2a str. 301
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2021-01-20
Authors: Osipiuk, J., Endres, M., Becker, D.P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7lgq: Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 with ATP and 8x(Asp-Arg)-Asn
Classification: LIGASE
Source organism: Synechocystis sp. (strain PCC 6714); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-01-20
Authors: Sharon, I., Grogg, M., Hilvert, D., Schmeing, T.M.
PDB entry 7lgr: Streptococcus mutans Collagen binding Protein CNM - N2 Domain
Classification: CELL ADHESION
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-20
Authors: Schormann, N., Deivanayagam, C.
PDB entry 7lgs: Structure of EGFR_D770_N771insNPG/V948R in complex with covalent inhibitor Osimertinib.
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2021-01-21
Authors: Skene, R.J., Lane, W.
PDB entry 7lgt: HLA-B*07:02 in complex with 229E-derived coronavirus nucleocapsid peptide N75-83
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2021-01-21
Authors: Gras, S., Szeto, C., Chatzileontiadou, D.S.M.
PDB entry 7lgu: Structure of human prestin in the presence of NaCl
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2021-01-21
Authors: Ge, J., Gouaux, E.
PDB entry 7lgv: NMR structure of Beta-KTx14.3
Classification: TOXIN
Source organism: Lychas mucronatus
Experimental method: SOLUTION NMR
Deposited: 2021-01-21
Authors: Carranza-Gonzalez, L.E., Titaux-Delgado, G.A., del Rio-Portilla, J.F.
PDB entry 7lgw: Structure of human Prestin in nanodisc in the presence of NaCl
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-01-21
Authors: Ge, J., Gouaux, E.
PDB entry 7lgx: The aminoacrylate form of mutant beta-K167T Salmonella typhimurium Tryptophan Synthase in complex with with inhibitor N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the enzyme alpha-site, benzimidazole (BZI) at the enzyme beta site and cesium ion at the metal coordination site at 1.80 Angstrom resolution
Classification: LYASE/LYASE INHIBITOR
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-01-21
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7lh2: Structure of human prestin in the presence of sodium salicylate and sodium sulfate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2021-01-21
Authors: Ge, J., Gouaux, E.
PDB entry 7lh3: Structure of human prestin in the presence of sodium sulfate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-01-21
Authors: Ge, J., Gouaux, E.
PDB entry 7lh5: Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.27 Å
Deposited: 2021-01-21
Authors: Golkar, T., Berghuis, A.M., Schmeing, T.M.
PDB entry 7lh6: The structure of Bacteroides plebeius L-galactose dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Bacteroides plebeius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-01-21
Authors: Robb, C.S., Pluvinage, B., Vickers, C., Boraston, A.B.
PDB entry 7lh7: Crystal structure of BCL-XL in complex with a benzothiazole-based inhibitor
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.409 Å
Deposited: 2021-01-21
Authors: Judge, R.A., Tao, Z.
PDB entry 7lh8: CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH INHIBITOR JJ-II-131
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-01-21
Authors: Schonbrunn, E., Chan, A.
PDB entry 7lh9: Crystal structure of BRPF2 PWWP domain in complex with DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-01-21
Authors: Zhang, M., Lei, M., Qin, S., Dong, A., Yang, A., Li, Y., Loppnau, P., Hughes, T.R., Arrowsmith, C.H., Edwards, A.M., Min, J., Liu, J., Structural Genomics Consortium (SGC)
PDB entry 7lha: Structure of the Exo-L-galactose-6-sulfatase BuS1_11 from Bacteroides uniformis
Classification: HYDROLASE
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-01-21
Authors: Robb, C.S., Boraston, A.B.
PDB entry 7lhb: Crystal structure of Bcl-2 in complex with prodrug ABBV-167
Classification: APOPTOSIS
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.068 Å
Deposited: 2021-01-21
Authors: Judge, R.A., Salem, A.H.
PDB entry 7lhc: NMR Solution Structure of [T20K]kalata B1
Classification: PLANT PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2021-01-22
Authors: Harvey, P.J., Craik, D.J., Gruber, C.W.
PDB entry 7lhd: The complete model of phage Qbeta virion
Classification: VIRUS/RNA
Source organism: Escherichia phage Qbeta; Escherichia virus Qbeta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2021-01-22
Authors: Chang, J.Y., Zhang, J.
PDB entry 7lhe: Structure of full-length IP3R1 channel reconstituted into lipid nanodisc in the apo-state
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-01-22
Authors: Baker, M.R., Fan, G., Baker, M.L., Serysheva, I.I.
PDB entry 7lhf: Structure of full-length IP3R1 channel solubilized in LNMG & lipid in the apo-state
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2021-01-22
Authors: Baker, M.R., Fan, G., Baker, M.L., Serysheva, I.I.
PDB entry 7lhg: Cryo-EM structure of E. coli P pilus tip assembly intermediate PapC-PapD-PapK-PapG in the first conformation
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-01-23
Authors: Du, M., Yuan, Z., Werneburg, G., Henderson, N., Chauhan, H., Kovach, A., Zhao, G., Johl, J., Li, H., Thanassi, D.
PDB entry 7lhh: Cryo-EM structure of E. coli P pilus tip assembly intermediate PapC-PapD-PapK-PapG in the second conformation
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.2 Å
Deposited: 2021-01-23
Authors: Du, M., Yuan, Z., Werneburg, G., Henderson, N., Chauhan, H., Kovach, A., Zhao, G., Johl, J., Li, H., Thanassi, D.
PDB entry 7lhi: Cryo-EM structure of E. coli P pilus tip assembly intermediate PapC-PapD-PapK-PapF-PapG
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.6 Å
Deposited: 2021-01-23
Authors: Du, M., Yuan, Z., Werneburg, G., Henderson, N., Chauhan, H., Kovach, A., Zhao, G., Johl, J., Li, H., Thanassi, D.
PDB entry 7lhj: Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with 15-cis-retinal
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2021-01-25
Authors: Ehyaei, N., Geiger, J.H., Borhan, B.
PDB entry 7lhk: High-Resolution Crystal Structure of a Lipin/Pah Phosphatidic Acid Phosphatase
Classification: HYDROLASE
Source organism: Tetrahymena thermophila (strain SB210)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-01-25
Authors: Khayyo, V.I., Airola, M.V.
PDB entry 7lhl: cryo-EM structure of Mycobacterium smegmatis Lhr helicase C-terminal domain
Classification: HYDROLASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-01-25
Authors: Wang, J., Warren, G.M., Shuman, S., Patel, D.J.
PDB entry 7lhm: Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A:Q38L mutant of cellular retinol binding protein II complex with all-trans-retinal
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-01-25
Authors: Ehyaei, N., Geiger, J.H., Borhan, B.
PDB entry 7lhn: Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal after exposure to visible light
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2021-01-25
Authors: Ehyaei, N., Geiger, J.H., Borhan, B.
PDB entry 7lho: Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal in the dark
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-01-26
Authors: Ehyaei, N., Geiger, J.H., Borhan, B.
PDB entry 7lhp: Crystal Structure of EcDsbA in a complex with methyl 2-(6-bromo-2-phenylbenzofuran-3-yl)acetate
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-01-26
Authors: Ilyichova, O.V., Scanlon, M.J.
PDB entry 7lhq: Solution structure of SARS-CoV-2 nonstructural protein 7 at pH 7.0
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: SOLUTION NMR
Deposited: 2021-01-26
Authors: Lee, Y., Tonelli, M., Anderson, T.K., Kirchdoerfer, R.N., Henzler-Wildman, K., Lee, W.
PDB entry 7lhr: Crystal structure of adenosine-5'-phosphosulfate reductase from Mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2021-01-26
Authors: Feliciano, P.R., Drennan, C.L.
PDB entry 7lhs: Crystal structure of adenosine-5'-phosphosulfate reductase from Mycobacterium tuberculosis in a complex with substrate APS
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2021-01-26
Authors: Feliciano, P.R., Drennan, C.L.
PDB entry 7lht: Structure of the LRRK2 dimer
Classification: TRANSFERASE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-01-26
Authors: Myasnikov, A., Zhu, H., Hixson, P., Xie, B., Yu, K., Pitre, A., Peng, J., Sun, J.
PDB entry 7lhu: Crystal structure of adenosine-5'-phosphosulfate reductase from Mycobacterium tuberculosis in a complex with product AMP
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2021-01-26
Authors: Feliciano, P.R., Drennan, C.L.
PDB entry 7lhv: Structure of Arabidopsis thaliana sulfate transporter AtSULTR4;1
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2021-01-26
Authors: Wang, L., Chen, K., Zhou, M.
PDB entry 7lhw: Structure of the LRRK2 monomer
Classification: TRANSFERASE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-01-26
Authors: Myasnikov, A., Zhu, H., Hixson, P., Xie, B., Yu, K., Pitre, A., Peng, J., Sun, J.
PDB entry 7lhx: Human U1A protein with F37M and F77M mutations for improved phasing
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-01-26
Authors: Jenkins, J.L., Lippa, G.M., Wedekind, J.E.
PDB entry 7lhy: Caenorhabditis elegans SWSN-4 (SMARCA4-BRG1) ATPase Bromodomain in complex with a modified histone H3, N6-epsilon-acetyl-L-lysine 14 (H3K14ac) polypeptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-01-26
Authors: Enriquez, P., Rose, R.B.
PDB entry 7lhz: K. pneumoniae Topoisomerase IV (ParE-ParC) in complex with DNA and (3S)-10-[(3R)-3-(1-aminocyclopropyl)pyrrolidin-1-yl]-9-fluoro-3-methyl-5-oxo-2,3-dihydro-5H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid (compound 25)
Classification: ISOMERASE/DNA/INHIBITOR
Source organism: Klebsiella pneumoniae 342; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2021-01-26
Authors: Noeske, J., Shu, W., Bellamacina, C.
PDB entry 7li0: Crystal structure of apo Moraxella catarrhalis ferric binding protein A in an open conformation
Classification: METAL TRANSPORT
Source organism: Moraxella catarrhalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-01-26
Authors: Chan, C., Ng, D., Fraser, M.E., Schryvers, A.B.
PDB entry 7li1: Crystal structure of holo Moraxella catarrhalis ferric binding protein A in an open conformation
Classification: METAL TRANSPORT
Source organism: Moraxella catarrhalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-01-26
Authors: Chan, C., Ng, D., Fraser, M.E., Schryvers, A.B.
PDB entry 7li2: Omega ester peptide pre-fuscimiditide
Classification: UNKNOWN FUNCTION
Source organism: Thermobifida fusca (strain YX)
Experimental method: SOLUTION NMR
Deposited: 2021-01-26
Authors: Link, A.J., Elashal, H.E.
PDB entry 7li3: Structure of the LRRK2 G2019S mutant
Classification: TRANSFERASE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-01-26
Authors: Myasnikov, A., Zhu, H., Hixson, P., Xie, B., Yu, K., Pitre, A., Peng, J., Sun, J.
PDB entry 7li4: Structure of LRRK2 after symmetry expansion
Classification: TRANSFERASE, HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-01-26
Authors: Myasnikov, A., Zhu, H., Hixson, P., Xie, B., Yu, K., Pitre, A., Peng, J., Sun, J.
PDB entry 7li5: Crystal Structure Analysis of human TEAD1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2021-01-26
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 7li6: apo SERT reconstituted in lipid nanodisc in KCl
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-01-26
Authors: Yang, D., Gouaux, E.
PDB entry 7li7: apo serotonin transporter reconstituted in lipid nanodisc in presence of NaCl in occluded conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-01-26
Authors: Yang, D., Gouaux, E.
PDB entry 7li8: apo serotonin transporter reconstituted in lipid nanodisc in presence of NaCl in inward open conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-01-26
Authors: Yang, D., Gouaux, E.
PDB entry 7li9: 5-HT bound serotonin transporter reconstituted in lipid nanodisc in KCl
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-01-26
Authors: Yang, D., Gouaux, E.
PDB entry 7lia: 5-HT bound serotonin transporter reconstituted in lipid nanodisc in presence of NaCl in outward facing conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-01-26
Authors: Yang, D., Gouaux, E.
PDB entry 7lib: X-ray crystal structure of a cyclic peptide containing beta-2-microglobulin (63-69) and a gamma-methylornithine turn unit
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2021-01-26
Authors: Wierzbicki, M., Nowick, J.S., Li, X.
PDB entry 7lic: The structure of the insect olfactory receptor OR5 from Machilis hrabei
Classification: MEMBRANE PROTEIN
Source organism: Machilis hrabei
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-01-26
Authors: del Marmol, J., Ruta, V.
PDB entry 7lid: The structure of the insect olfactory receptor OR5 from Machilis hrabei in complex with eugenol
Classification: MEMBRANE PROTEIN
Source organism: Machilis hrabei
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-01-27
Authors: del Marmol, J., Ruta, V.
PDB entry 7lie: The isolated chicken ASIC1a thumb domain (ATD-c1a) retains the structure and ligand binding properties of the full length chicken ASIC1a
Classification: MEMBRANE PROTEIN
Source organism: Gallus gallus
Experimental method: SOLUTION NMR
Deposited: 2021-01-27
Authors: Mishra, B.M., Mobli, M.
PDB entry 7lif: Aspartimidylated omega ester peptide fuscimiditide
Classification: UNKNOWN FUNCTION
Source organism: Thermobifida fusca (strain YX)
Experimental method: SOLUTION NMR
Deposited: 2021-01-27
Authors: Link, A.J., Elashal, H.E.
PDB entry 7lig: The structure of the insect olfactory receptor OR5 from Machilis hrabei in complex with DEET
Classification: MEMBRANE PROTEIN
Source organism: Machilis hrabei
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-01-27
Authors: del Marmol, J., Ruta, V.
PDB entry 7lih: CryoEM structure of Mayaro virus icosahedral subunit
Classification: VIRAL PROTEIN
Source organism: Mayaro virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2021-01-27
Authors: Chmielewski, D., Kaelber, J.T., Jin, J., Weaver, S., Auguste, A.J., Chiu, W.
PDB entry 7lii: Thermotoga maritima Encapsulin Nanocompartment Pore Mutant S7D
Classification: VIRUS LIKE PARTICLE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2021-01-27
Authors: Andreas, M.P., Adamson, L., Tasneem, N., Close, W., Giessen, T., Lau, Y.H.
PDB entry 7lij: Thermotoga maritima Encapsulin Nanocompartment Pore Mutant S1K
Classification: VIRUS LIKE PARTICLE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2021-01-27
Authors: Andreas, M.P., Adamson, L., Tasneem, N., Close, W., Giessen, T., Lau, Y.H.
PDB entry 7lik: Thermotoga maritima Encapsulin Nanocompartment Pore Mutant S1R
Classification: VIRUS LIKE PARTICLE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2021-01-27
Authors: Andreas, M.P., Adamson, L., Tasneem, N., Close, W., Giessen, T., Lau, Y.H.
PDB entry 7lil: Thermotoga maritima Encapsulin Nanocompartment Pore Mutant SE3
Classification: VIRUS LIKE PARTICLE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2021-01-27
Authors: Andreas, M.P., Adamson, L., Tasneem, N., Close, W., Giessen, T., Lau, Y.H.
PDB entry 7lim: Thermotoga maritima Encapsulin Nanocompartment Pore Mutant S6E
Classification: VIRUS LIKE PARTICLE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2021-01-27
Authors: Andreas, M.P., Adamson, L., Tasneem, N., Close, W., Giessen, T., Lau, Y.H.
PDB entry 7lin: X-ray structure of SPOP MATH domain (D140G) in complex with a 53BP1 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2021-01-27
Authors: Botuyan, M.V., Cui, G., Mer, G.
PDB entry 7lio: X-ray structure of SPOP MATH domain (S119D) in complex with a 53BP1 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2021-01-27
Authors: Botuyan, M.V., Cui, G., Mer, G.
PDB entry 7lip: X-ray structure of SPOP MATH domain (D140G)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2021-01-27
Authors: Botuyan, M.V., Cui, G., Mer, G.
PDB entry 7liq: X-ray structure of SPOP MATH domain (S119A)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-01-27
Authors: Botuyan, M.V., Cui, G., Mer, G.
PDB entry 7lir: Structure of the invertebrate ALK GRD
Classification: SIGNALING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-01-27
Authors: Stayrook, S., Li, T., Klein, D.E.
PDB entry 7lis: Thermotoga maritima Encapsulin Nanocompartment Pore Mutant S5D
Classification: VIRUS LIKE PARTICLE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2021-01-27
Authors: Andreas, M.P., Adamson, L., Tasneem, N., Close, W., Giessen, T., Lau, Y.H.
PDB entry 7lit: Thermotoga maritima Encapsulin Nanocompartment Pore Mutant S7G
Classification: VIRUS LIKE PARTICLE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2021-01-27
Authors: Andreas, M.P., Adamson, L., Tasneem, N., Close, W., Giessen, T., Lau, Y.H.
PDB entry 7liu: DDX3X bound to ATP analog and remodeled RNA:DNA hybrid
Classification: RNA-BINDING PROTEIN/DNA,RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.001 Å
Deposited: 2021-01-27
Authors: Enemark, E.J., Yu, S.
PDB entry 7liv: Structure of human transfer RNA visualized in the cytomegalovirus, a DNA virus
Classification: VIRUS
Source organism: Human cytomegalovirus (strain AD169)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-01-28
Authors: Liu, Y.T., Strugatsky, D., Liu, W., Zhou, Z.H.
PDB entry 7liw: Local refinement of human ATP citrate lyase E599Q mutant ASH domain
Classification: LYASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2021-01-28
Authors: Wei, X., Marmorstein, R.
PDB entry 7lix: CaRSP1 and scaffolded phycoerythrin beta subunits from the phycobilisome of Porphyridium purpureum
Classification: PHOTOSYNTHESIS
Source organism: Porphyridium purpureum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-01-28
Authors: Rathbone, H.W., Landsberg, M.J., Michie, K.A., Green, B.R., Curmi, P.M.G.
PDB entry 7liy: CaRSP2 and scaffolded phycoerythrin beta subunits from the phycobilisome of Porphyridium purpureum
Classification: PHOTOSYNTHESIS
Source organism: Porphyridium purpureum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-01-28
Authors: Rathbone, H.W., Landsberg, M.J., Michie, K.A., Green, B.R., Curmi, P.M.G.
PDB entry 7liz: LR6 rod linker and scaffolded phycoerythrin beta subunits from the phycobilisome of Porphyridium purpureum
Classification: PHOTOSYNTHESIS
Source organism: Porphyridium purpureum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-01-28
Authors: Rathbone, H.W., Landsberg, M.J., Michie, K.A., Green, B.R., Curmi, P.M.G.
PDB entry 7lj0: Linker 3 and scaffolded phycoerythrin beta subunit from the phycobilisome of Porphyridium purpureum
Classification: PHOTOSYNTHESIS
Source organism: Porphyridium purpureum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-01-28
Authors: Rathbone, H.W., Landsberg, M.J., Michie, K.A., Green, B.R., Curmi, P.M.G.
PDB entry 7lj1: Human Prx1-Srx Decameric Complex
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2021-01-28
Authors: Forshaw, T.E., Reisz, J.A., Nelson, K.J., Gumpena, R., Lawson, J.R., Jonsson, T., Wu, H., Clodfelter, J.E., Johnson, L., Furdui, C.M., Lowther, W.T.
PDB entry 7lj2: Structure of Exo-L-galactose-6-sulfatase BuS1_11 from Bacteroides uniformis in complex with neoporphyrabiose
Classification: HYDROLASE
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-01-28
Authors: Robb, C.S., Boraston, A.B.
PDB entry 7lj3: Structure of human transfer RNA visualized in the cytomegalovirus, a DNA virus
Classification: VIRUS
Source organism: Homo sapiens; Human cytomegalovirus (strain AD169)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-01-28
Authors: Liu, Y.T., Strugatsky, D., Liu, W., Zhou, Z.H.
PDB entry 7lj4: Human TRAAK K+ channel FHEIG mutant A270P in a K+ bound conductive conformation
Classification: METAL TRANSPORT/Immune System
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.782 Å
Deposited: 2021-01-28
Authors: Rietmeijer, R.A., Brohawn, S.G.
PDB entry 7lj5: Human TRAAK K+ channel FHIEG mutant A198E in a K+ bound conductive conformation
Classification: METAL TRANSPORT/Immune System
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2021-01-28
Authors: Rietmeijer, R.A., Brohawn, S.G.
PDB entry 7lj9: Structure of human ATP citrate lyase in complex with acetyl-CoA and oxaloacetate
Classification: LYASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-01-28
Authors: Wei, X., Marmorstein, R.
PDB entry 7lja: Human TRAAK K+ channel FHEIG mutant A198E in a Tl+ bound conductive conformation
Classification: METAL TRANSPORT/Immune System
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2021-01-28
Authors: Rietmeijer, R.A., Brohawn, S.G.
PDB entry 7ljb: Human TRAAK K+ channel mutant G158D in a K+ bound conductive conformation
Classification: METAL TRANSPORT/Immune System
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2021-01-28
Authors: Rietmeijer, R.A., Brohawn, S.G.
PDB entry 7ljc: Allosteric modulator LY3154207 binding to SKF-81297-bound dopamine receptor 1 in complex with miniGs protein
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Lama glama; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-01-28
Authors: Zhuang, Y., Krumm, B., Zhang, H., Zhou, X.E., Wang, Y., Guo, J., Huang, X.-P., Liu, Y., Wang, L., Cheng, X., Jiang, Y., Jiang, H., Melcher, K., Zhang, C., Yi, W., Roth, B.L., Zhang, Y., Xu, H.E.
PDB entry 7ljd: Allosteric modulator LY3154207 binding to dopamine-bound dopamine receptor 1 in complex with miniGs protein
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Lama glama; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-01-28
Authors: Zhuang, Y., Krumm, B., Zhang, H., Zhou, X.E., Wang, Y., Guo, J., Huang, X.-P., Liu, Y., Wang, L., Cheng, X., Jiang, Y., Jiang, H., Melcher, K., Zhang, C., Yi, W., Roth, B.L., Zhang, Y., Xu, H.E.
PDB entry 7lje: Discovery of Spirohydantoins as Selective, Orally Bioavailable Inhibitors of p300/CBP Histone Acetyltransferases
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.607 Å
Deposited: 2021-01-29
Authors: Jakob, C.G.
PDB entry 7ljf: Cryo-EM structure of the Mpa hexamer in the presence of ATP and the Pup-FabD substrate
Classification: STRUCTURAL PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-01-29
Authors: Yin, Y., Li, H.
PDB entry 7ljg: Crystal Structure of Lectin from Dioclea altissima
Classification: SUGAR BINDING PROTEIN
Source organism: Dioclea violacea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2021-01-29
Authors: Vieira-Neto, A.E., Pereira, H.M., Sousa, F.D., Goncalves, N.G.G., Vieira, N.C.G., Monteiro-Moreira, A.C.O., Moereira, R.A.
PDB entry 7ljh: Structure of poly(aspartic acid) hydrolase PahZ2 with Zn+2 bound
Classification: HYDROLASE
Source organism: Sphingomonas sp. KT-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-01-29
Authors: Brambley, C.A., Yared, T.J., Gonzalez, M., Jansch, A.L., Wallen, J.R., Weiland, M.H., Miller, J.M.
PDB entry 7lji: Structure of poly(aspartic acid) hydrolase PahZ2 with Gd+3 bound
Classification: HYDROLASE
Source organism: Sphingomonas sp. KT-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-01-29
Authors: Brambley, C.A., Yared, T.J., Gonzalez, M., Jansch, A.L., Wallen, J.R., Weiland, M.H., Miller, J.M.
PDB entry 7ljj: Structure of the Exo-alpha-L-galactosidase BpGH29 from Bacteroides plebeius
Classification: HYDROLASE
Source organism: Bacteroides plebeius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-01-29
Authors: Robb, C.S., Boraston, A.B.
PDB entry 7ljk: Crystal structure of the deacylation deficient KPC-2 F72Y mutant
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2021-01-29
Authors: Furey, I., Palzkill, T., Sankaran, B., Hu, L., Prasad, B.V.V.
PDB entry 7ljl: Structure of the Enterobacter cloacae CD-NTase CdnD in complex with ATP
Classification: TRANSFERASE
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-01-29
Authors: Govande, A., Lowey, B., Eaglesham, J.B., Whiteley, A.W., Kranzusch, P.J.
PDB entry 7ljm: Structure of the Salmonella enterica CD-NTase CdnD in complex with GTP
Classification: TRANSFERASE
Source organism: Salmonella enterica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-01-29
Authors: Govande, A., Lowey, B., Eaglesham, J.B., Whiteley, A.W., Kranzusch, P.J.
PDB entry 7ljn: Structure of the Bradyrhizobium diazoefficiens CD-NTase CdnG in complex with GTP
Classification: TRANSFERASE
Source organism: Bradyrhizobium diazoefficiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-01-29
Authors: Govande, A., Lowey, B., Eaglesham, J.B., Whiteley, A.T., Kranzusch, P.J.
PDB entry 7ljo: Structure of the Bacteroides fragilis CD-NTase CdnB in complex with ADP
Classification: TRANSFERASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2021-01-29
Authors: Govande, A., Lowey, B., Eaglesham, J.B., Whiteley, A.T., Kranzusch, P.J.
PDB entry 7ljp: Structure of Thermotoga maritima SmpB
Classification: RNA BINDING PROTEIN
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-01-29
Authors: Chan, C.W., Mondragon, A.
PDB entry 7ljr: SARS-CoV-2 Spike Protein Trimer bound to DH1043 fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2021-01-30
Authors: Gobeil, S., Acharya, P.
PDB entry 7ljs: Porcine Dihydropyrimidine dehydrogenase (DPD) complexed with 5-Ethynyluracil (5EU) - Open Form
Classification: FLAVOPROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-01-30
Authors: Butrin, A., Forouzesh, D., Beaupre, B., Wawrzak, Z., Liu, D., Moran, G.
PDB entry 7ljt: Porcine Dihydropyrimidine Dehydrogenase (DPD) soaked with 5-Ethynyluracil (5EU), NADPH - 20 minutes
Classification: FLAVOPROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-01-30
Authors: Butrin, A., Forouzesh, D., Beaupre, B., Wawrzak, Z., Liu, D., Moran, G.
PDB entry 7lju: Porcine Dihydropyrimidine Dehydrogenase (DPD) crosslinked with 5-Ethynyluracil (5EU)
Classification: FLAVOPROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2021-01-30
Authors: Butrin, A., Forouzesh, D., Beaupre, B., Wawrzak, Z., Liu, D., Moran, G.
PDB entry 7ljv: X-ray radiation damage series on Thaumatin at 277K, crystal structure, dataset 4
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2021-01-31
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7ljw: X-ray radiation damage series on Thaumatin at 277K, multi-conformer model, dataset 1
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2021-02-01
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7ljx: Oxidized rat cytochrome c mutant (K53Q)
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2021-02-01
Authors: Huttemann, M., Edwards, B.F.P., Brunzelle, J.S., Vaishnav, A.
PDB entry 7ljy: Cryo-EM structure of the B dENE construct complexed with a 28-mer poly(A)
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2021-02-01
Authors: Torabi, S., Chen, Y., Zhang, K., Wang, J., DeGregorio, S., Vaidya, A., Su, Z., Pabit, S., Chiu, W., Pollack, L., Steitz, J.