LiteFold/PDB huggingface dataset:
PDB entry 8fi4: Crystal Structure of Glycylpeptide N-tetradecanoyltransferase (N-myristoyl transferase) (NMT) from Leishmania major Friedlin bound to tetradecanoyl-CoA (Orthorhombic P Form 1)
Classification: TRANSFERASE
Source organism: Leishmania major strain Friedlin
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-12-15
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8fi5: Crystal Structure of Glycylpeptide N-tetradecanoyltransferase (N-myristoyl transferase) (NMT) from Leishmania major Friedlin bound to tetradecanoyl-CoA (Orthorhombic P Form 2)
Classification: TRANSFERASE
Source organism: Leishmania major strain Friedlin
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-12-15
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8fi6: Crystal Structure of Glycylpeptide N-tetradecanoyltransferase (N-myristoyl transferase) (NMT) from Leishmania major Friedlin bound to tetradecanoyl-CoA (Orthorhombic P Form 3)
Classification: TRANSFERASE
Source organism: Leishmania major strain Friedlin
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-12-15
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8fi7: Structure of Lettuce C20T bound to DFHO
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-12-15
Authors: Passalacqua, L.F.M., Ferre-D'Amare, A.R.
PDB entry 8fi8: Structure of Lettuce C20T bound to DFAME
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-12-15
Authors: Passalacqua, L.F.M., Ferre-D'Amare, A.R.
PDB entry 8fi9: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody WRAIR-5001
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Macaca mulatta; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 4.2 Å
Deposited: 2022-12-15
Authors: Sankhala, R.S., Jensen, J.L., Joyce, M.G.
PDB entry 8fia: The structure of fly Teneurin self assembly
Classification: CELL ADHESION
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-12-15
Authors: Bandekar, S.J., Li, J., Arac, D.
PDB entry 8fib: Crystal Structure of Erwinia tracheiphila CYP114
Classification: OXIDOREDUCTASE
Source organism: Erwinia tracheiphila PSU-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2022-12-16
Authors: Stewart Jr., C.E., Nagel, R.
PDB entry 8fic: Crystal Structure of Erwinia tracheiphila CYP114 in complex with ent-kaurenoic acid (Crystal Form 1)
Classification: OXIDOREDUCTASE
Source organism: Erwinia tracheiphila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-16
Authors: Stewart Jr., C.E., Nagel, R.
PDB entry 8fid: Crystal Structure of Erwinia tracheiphila CYP114 in complex with ent-kaurenoic acid (Crystal Form 2)
Classification: OXIDOREDUCTASE
Source organism: Erwinia tracheiphila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2022-12-16
Authors: Stewart Jr., C.E., Nagel, R.
PDB entry 8fie: Crystal Structure of Erwinia tracheiphila CYP114 mutant - A261D
Classification: OXIDOREDUCTASE
Source organism: Erwinia tracheiphila PSU-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2022-12-16
Authors: Stewart Jr., C.E., Alexander, L.E., Nagel, R.
PDB entry 8fif: A2.3 Nanobody In Complex With Microcystin-LR
Classification: IMMUNE SYSTEM
Source organism: Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-12-16
Authors: Arenas, R., Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K.
PDB entry 8fig: Room-temperature X-ray structure of SARS-CoV-2 main protease double mutant E290A/R298A in complex with GC373
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-12-16
Authors: Kovalevsky, A., Coates, L., Kneller, D.W.
PDB entry 8fih: Multi-state design of two-state switchable hinge proteins
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-16
Authors: Bera, A.K., Broerman, A., Baker, D.
PDB entry 8fii: Wild type APOBEC3A in complex with TT(FdZ)-hairpin inhibitor (crystal form 1)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2022-12-16
Authors: Harjes, S., Jameson, G.B., Harjes, E., Filichev, V.V., Kurup, H.M.
PDB entry 8fij: Wild type APOBEC3A in complex with TT(FdZ)-hairpin inhibitor (crystal form 2)
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.799 Å
Deposited: 2022-12-16
Authors: Harjes, S., Jameson, G.B., Harjes, E., Filichev, V.V., Kurup, H.M.
PDB entry 8fik: APOBEC3A E72A inactive mutant in complex with ATTC-hairpin DNA substrate
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.912 Å
Deposited: 2022-12-16
Authors: Harjes, S., Jameson, G.B., Harjes, E., Filichev, V.V., Kurup, H.M.
PDB entry 8fil: Zinc-free APOBEC3A (inactive E72A mutant) in complex with TTC-hairpin DNA substrate
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2022-12-16
Authors: Harjes, S., Jameson, G.B., Harjes, E., Filichev, V.V., Kurup, H.M.
PDB entry 8fim: Structure of APOBEC3A (E72A inactive mutant) in complex with TTC-hairpin DNA substrate
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-12-16
Authors: Harjes, S., Jameson, G.B., Harjes, E., Filichev, V.V., Kurup, H.M.
PDB entry 8fin: Multi-state design of two-state switchable hinge proteins
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-12-16
Authors: Bera, A.K., Leung, P.J.Y., Baker, D.
PDB entry 8fio: Hypothetical anthocyanidin reductase from Sorghum bicolor-NADP(H) and naringenin complex
Classification: OXIDOREDUCTASE
Source organism: Sorghum bicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-12-16
Authors: Zhang, B., Kang, C.
PDB entry 8fip: Hypothetical anthocyanidin reducatase from Sorghum bicolor- NADP+ complex
Classification: OXIDOREDUCTASE
Source organism: Sorghum bicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-16
Authors: Zhang, B., Kang, C.
PDB entry 8fiq: Multi-state design of two-state switchable hinge proteins
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2022-12-16
Authors: Bera, A.K., Leung, P.J.Y., Baker, D.
PDB entry 8fir: Crystal structure of TpPta, a phosphotransacetylase from Treponema pallidum
Classification: TRANSFERASE
Source organism: Treponema pallidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-12-16
Authors: Brautigam, C.A., Norgard, M.V., Deka, R.K.
PDB entry 8fis: Structure of Bispecific CAP256V2LS-J3 Fab in complex with BG505 DS-SOSIP.664
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2022-12-16
Authors: Gorman, J., Kwong, P.D.
PDB entry 8fit: Multi-state design of two-state switchable hinge proteins
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-12-16
Authors: Bera, A.K., Praetorius, F., Baker, D.
PDB entry 8fiu: Potent long-acting inhibitors targeting HIV-1 capsid based on a versatile quinazolin-4-one scaffold
Classification: ANTIVIRAL-PROTEIN/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-12-16
Authors: Nolte, R.T.
PDB entry 8fiv: Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor Jun10541R
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2022-12-16
Authors: Sacco, M., Wang, J., Chen, Y.
PDB entry 8fiw: Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor Jun10221
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2022-12-16
Authors: Sacco, M., Wang, J., Chen, Y.
PDB entry 8fix: Cryo-EM structure of E. coli RNA polymerase backtracked elongation complex harboring a terminal mismatch
Classification: TRANSCRIPTION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-12-17
Authors: Florez Ariza, A., Wee, L., Tong, A., Canari, C., Grob, P., Nogales, E., Bustamante, C.
PDB entry 8fiy: Cryo-EM structure of E. coli RNA polymerase Elongation complex in the Transcription-Translation Complex (RNAP in an anti-swiveled conformation)
Classification: TRANSCRIPTION/DNA/RNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.3 Å
Deposited: 2022-12-17
Authors: Florez Ariza, A., Wee, L., Tong, A., Canari, C., Grob, P., Nogales, E., Bustamante, C.
PDB entry 8fiz: Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)
Classification: TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-12-18
Authors: Florez Ariza, A., Wee, L., Tong, A., Canari, C., Grob, P., Nogales, E., Bustamante, C.
PDB entry 8fj0: Crystal Structure of the Tick Evasin EVA-AAM1001(Y44A) Complexed to Human Chemokine CCL2
Classification: CYTOKINE
Source organism: Amblyomma americanum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2022-12-18
Authors: Devkota, S.R., Bhusal, R.P., Aryal, P., Wilce, M.C.J., Stone, M.J.
PDB entry 8fj2: Crystal Structure of the Tick Evasin EVA-AAM1001(C8) Complexed to Human Chemokine CCL17
Classification: CYTOKINE
Source organism: Amblyomma americanum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2022-12-19
Authors: Devkota, S.R., Bhusal, R.P., Aryal, P., Wilce, M.C.J., Stone, M.J.
PDB entry 8fj3: Crystal Structure of the Tick Evasin EVA-AAM1001 Complexed to Human Chemokine CCL7(Y13A)
Classification: CYTOKINE
Source organism: Amblyomma americanum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2022-12-19
Authors: Devkota, S.R., Bhusal, R.P., Aryal, P., Wilce, M.C.J., Stone, M.J.
PDB entry 8fj4: LSD1-CoREST in complex with T108, short soaking
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2022-12-19
Authors: Caroli, J., Mattevi, A.
PDB entry 8fj5: Structure of the Haloferax volcanii archaeal type IV pilus
Classification: STRUCTURAL PROTEIN
Source organism: Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-12-19
Authors: Wang, F., Kreutzberger, M.A., Baquero, D.P., Krupovic, M., Egelman, E.H.
PDB entry 8fj7: LSD1-CoREST in complex with T108 and SNAG peptide
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-12-19
Authors: Caroli, J., Mattevi, A.
PDB entry 8fj8: Crystal structure of Mn(2+),Ca(2+)-S100B
Classification: METAL BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2022-12-19
Authors: Hunter, D.A.
PDB entry 8fj9: Structure of the catalytic domain of Streptococcus mutans GtfB in tetragonal space group P4322
Classification: TRANSFERASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-12-19
Authors: Schormann, N., Deivanayagam, C.
PDB entry 8fja: CryoEM structure of HLA-A2 MAGEA4 (230-239) in complex with REGN6972 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-12-19
Authors: Saotome, K., Franklin, M.C.
PDB entry 8fjb: CryoEM structure of HLA-A2 MAGEA4 (286-294) in complex with H2aM31345N Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2022-12-19
Authors: Saotome, K., Franklin, M.C.
PDB entry 8fjc: Structure of the catalytic domain of Streptococcus mutans GtfB complexed to acarbose in tetragonal space group P4322
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-12-19
Authors: Schormann, N., Deivanayagam, C.
PDB entry 8fjd: Structure of chlorophyllase from Triticum aestivum
Classification: PLANT PROTEIN
Source organism: Triticum aestivum
Experimental method: X-RAY DIFFRACTION
Resolution: 4.46 Å
Deposited: 2022-12-19
Authors: Boggs, D., Jo, M., Bridwell-Rabb, J.
PDB entry 8fje: The five-repeat design E8
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-12-19
Authors: Bera, A.K., An, L., Baker, D.
PDB entry 8fjf: The three-repeat design H10
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-19
Authors: Bera, A.K., An, L., Baker, D.
PDB entry 8fjg: The two-repeat design H12
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2022-12-19
Authors: Bera, A.K., An, L., Baker, D.
PDB entry 8fjh: Crystal structure of RalA in a covalent complex with SOF-531
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-12-19
Authors: Landgraf, A.D., Yeh, I.-J., Bum-Erdene, K., Gonzalez-Gutierrez, G., Meroueh, S.
PDB entry 8fji: Crystal structure of RalA in a covalent complex with SOF-367
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2022-12-19
Authors: Landgraf, A.D., Yeh, I.-J., Bum-Erdene, K., Gonzalez-Gutierrez, G., Meroueh, S.
PDB entry 8fjk: Golden Shiner Reovirus Core Polar Vertex
Classification: VIRUS
Source organism: Golden shiner reovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-12-19
Authors: Stevens, A.S., Zhou, Z.H.
PDB entry 8fjl: Golden Shiner Reovirus Core Tropical Vertex
Classification: VIRUS
Source organism: Golden shiner reovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2022-12-19
Authors: Stevens, A.S., Zhou, Z.H.
PDB entry 8fjm: Crystal Structure of the Trypanosoma brucei DOT1A histone H3K76 methyltransferase in complex with AdoHcy - P212121 space group
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei TREU927
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-12-20
Authors: Frisbie, V.S., Hashimoto, H., Debler, E.W.
PDB entry 8fjn: Crystal Structure of the Trypanosoma brucei DOT1A histone H3K76 methyltransferase in complex with AdoHcy - C2221 space group
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-20
Authors: Frisbie, V.S., Hashimoto, H., Debler, E.W.
PDB entry 8fjo: X-ray crystal structure of CYP124A1 from Mycobacterium Marinum in complex with farnesyl acetate
Classification: OXIDOREDUCTASE/SUBSTRATE
Source organism: Mycobacterium marinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-12-20
Authors: Ghith, A., Bruning, J.B., Bell, S.G.
PDB entry 8fjp: Cryo-EM structure of native mosquito salivary gland surface protein 1 (SGS1)
Classification: ALLERGEN
Source organism: Aedes aegypti
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-12-20
Authors: Liu, S., Xia, X., Calvo, E., Zhou, Z.H.
PDB entry 8fjq: Structure of Thermomonospora curvata heme-containing DyP-type peroxidase E293G mutant
Classification: OXIDOREDUCTASE
Source organism: Thermomonospora curvata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2022-12-20
Authors: Khadka, S., Li, P., Geisbrecht, B.V.
PDB entry 8fjr: Structure of Thermomonospora curvata heme-containing DyP-type peroxidase E293H mutant
Classification: OXIDOREDUCTASE
Source organism: Thermomonospora curvata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2022-12-20
Authors: Khadka, S., Li, P., Geisbrecht, B.V.
PDB entry 8fjs: Structure of the Saccharolobus solfataricus archaeal type IV pilus at 3 Angstrom resolution
Classification: STRUCTURAL PROTEIN
Source organism: Saccharolobus solfataricus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-12-20
Authors: Kreutzberger, M.A., Wang, F., Krupovic, M., Egelman, E.H.
PDB entry 8fjt: Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF362 inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2022-12-20
Authors: Katinas, J.M., Dann III, C.E.
PDB entry 8fju: Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF347 inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2022-12-20
Authors: Katinas, J.M., Dann III, C.E.
PDB entry 8fjv: Human GAR transformylase in complex with GAR substrate and AGF362 inhibitor
Classification: LIGASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2022-12-20
Authors: Wong-Roushar, J., Dann III, C.E.
PDB entry 8fjw: Human GAR transformylase in complex with GAR substrate and AGF347 inhibitor
Classification: LIGASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-12-20
Authors: Wong-Roushar, J., Dann III, C.E.
PDB entry 8fjx: Human GAR transformylase in complex with GAR substrate and AGF320 inhibitor
Classification: LIGASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2022-12-20
Authors: Wong-Roushar, J., Dann III, C.E.
PDB entry 8fjy: Human GAR transformylase in complex with GAR substrate and AGF291 inhibitor
Classification: LIGASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2022-12-20
Authors: Wong-Roushar, J., Dann III, C.E.
PDB entry 8fjz: Crystal structure of HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with 3-{4-[(3R,5S)-3-Amino-5-methylpiperidin-1-yl]-6-chloro-7H-pyrrolo[2,3-d]pyrimidin-5-yl}benzonitrile
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.897 Å
Deposited: 2022-12-20
Authors: McTigue, M., Johnson, E., Cronin, C.
PDB entry 8fk0: Asymmetric cryo-EM structure of a curved Saccharolobus solfataricus type IV pilus
Classification: STRUCTURAL PROTEIN
Source organism: Saccharolobus solfataricus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-12-20
Authors: Kreutzberger, M.A., Wang, F., Krupovic, M., Egelman, E.H.
PDB entry 8fk2: The N-terminal VicR from Streptococcus mutans
Classification: GENE REGULATION
Source organism: Streptococcus mutans UA159
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2022-12-20
Authors: Zhang, H., Wu, H.
PDB entry 8fk3: Adeno-Associated Virus Porcine Origin capsid protein basic regions in complex with Importin-alpha 2
Classification: TRANSPORT PROTEIN
Source organism: Adeno-associated virus - Po1; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-12-20
Authors: Hoad, M., Forwood, J.K., Roby, J.A.
PDB entry 8fk4: Structure of the catalytic domain of Streptococcus mutans GtfB complexed to acarbose in orthorhombic space group P21212
Classification: TRANSFERASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2022-12-20
Authors: Schormann, N., Deivanayagam, C.
PDB entry 8fk5: Cryo-EM Structure of PG9RSH DU011 Fab in complex with BG505 DS-SOSIP.664
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-12-20
Authors: Gorman, J., Kwong, P.D.
PDB entry 8fk6: Crystal Structure of the Tick Evasin EVA-AAM1001(Y44A) Complexed to Human Chemokine CCL7
Classification: CYTOKINE
Source organism: Amblyomma americanum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2022-12-20
Authors: Devkota, S.R., Bhusal, R.P., Aryal, P., Wilce, M.C.J., Stone, M.J.
PDB entry 8fk7: Structure of the Pyrobaculum calidifontis flagellar-like archaeal type IV pilus
Classification: STRUCTURAL PROTEIN
Source organism: Pyrobaculum calidifontis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2022-12-20
Authors: Wang, F., Kreutzberger, M.A., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 8fk8: Crystal Structure of the Tick Evasin EVA-AAM1001(L39P) Complexed to Human Chemokine CCL7
Classification: CYTOKINE
Source organism: Amblyomma americanum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-12-20
Authors: Devkota, S.R., Bhusal, R.P., Aryal, P., Wilce, M.C.J., Stone, M.J.
PDB entry 8fk9: Crystal Structure of the Tick Evasin EVA-ACA1001 Complexed to Human Chemokine CCL16
Classification: CYTOKINE
Source organism: Amblyomma cajennense; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-12-21
Authors: Devkota, S.R., Bhusal, R.P., Aryal, P., Wilce, M.C.J., Stone, M.J.
PDB entry 8fkb: X-ray crystal structure of CYP124A1 from Mycobacterium Marinum bound to Farnesol
Classification: OXIDOREDUCTASE/SUBSTRATE
Source organism: Mycobacterium marinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2022-12-21
Authors: Ghith, A., Bruning, J.B., Bell, S.G.
PDB entry 8fkc: Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and inverse agonist SR33544
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2022-12-21
Authors: MacTavish, B.S., Kojetin, D.J.
PDB entry 8fkd: Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and inverse agonist SR33068
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-12-21
Authors: MacTavish, B.S., Kojetin, D.J.
PDB entry 8fke: Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and inverse agonist SR32904
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2022-12-21
Authors: MacTavish, B.S., Kojetin, D.J.
PDB entry 8fkf: Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and inverse agonist SR36706
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2022-12-21
Authors: MacTavish, B.S., Kojetin, D.J.
PDB entry 8fkg: Crystal structure of PPARgamma ligand-binding domain in complex with N-CoR peptide and inverse agonist SR33486
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2022-12-21
Authors: MacTavish, B.S., Kojetin, D.J.
PDB entry 8fkj: Yeast ATP Synthase in conformation-3, at pH 6
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-12-21
Authors: Sharma, S., Patel, H., Luo, M., Mueller, D.M., Liao, M.
PDB entry 8fkl: Truncated form of the catalytic domain of Streptococcus mutans GtfB
Classification: TRANSFERASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2022-12-21
Authors: Schormann, N., Deivanayagam, C.
PDB entry 8fkm: Human Atg3 with deletions of residues 1 to 25 and 90 to 190
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-12-21
Authors: Ye, Y.S., Tian, F.
PDB entry 8fko: Crystal structure of HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with 3-{4-[(2S,5R)-5-Amino-2-methylpiperidin-1-yl]-6-chloro-7H-pyrrolo[2,3-d]pyrimidin-5-yl}benzonitrile
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2022-12-21
Authors: McTigue, M., Johnson, E., Cronin, C.
PDB entry 8fkp: Human nucleolar pre-60S ribosomal subunit (State A1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fkq: Human nucleolar pre-60S ribosomal subunit (State A2)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fkr: Human nucleolar pre-60S ribosomal subunit (State B1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fks: Human nucleolar pre-60S ribosomal subunit (State B2)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fkt: Human nucleolar pre-60S ribosomal subunit (State C1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fku: Human nucleolar pre-60S ribosomal subunit (State C2)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fkv: Human nucleolar pre-60S ribosomal subunit (State D1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fkw: Human nucleolar pre-60S ribosomal subunit (State D2)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fkx: Human nucleolar pre-60S ribosomal subunit (State E)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fky: Human nucleolar pre-60S ribosomal subunit (State F)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fkz: Human nucleolar pre-60S ribosomal subunit (State G)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fl0: Human nucleolar pre-60S ribosomal subunit (State H)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fl1: Cryo-EM Structure of PG9RSH DU025 Fab in complex with BG505 DS-SOSIP.664
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2022-12-21
Authors: Gorman, J., Kwong, P.D.
PDB entry 8fl2: Human nuclear pre-60S ribosomal subunit (State I1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fl3: Human nuclear pre-60S ribosomal subunit (State I2)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fl4: Human nuclear pre-60S ribosomal subunit (State I3)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fl5: Crystal Structure of Enterovirus 68 3C Protease inactive mutant C147A at 1.8 Angstroms.
Classification: VIRAL PROTEIN
Source organism: enterovirus D68
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-12-21
Authors: Azzolino, V.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 8fl6: Human nuclear pre-60S ribosomal subunit (State J1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fl7: Human nuclear pre-60S ribosomal subunit (State J2)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fl8: Yeast ATP Synthase structure in presence of MgATP
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-12-21
Authors: Sharma, S., Patel, H., Luo, M., Mueller, D.M., Liao, M.
PDB entry 8fl9: Human nuclear pre-60S ribosomal subunit (State J3)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fla: Human nuclear pre-60S ribosomal subunit (State K1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8flb: Human nuclear pre-60S ribosomal subunit (State K2)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8flc: Human nuclear pre-60S ribosomal subunit (State K3)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fld: Human nuclear pre-60S ribosomal subunit (State L1)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8fle: Human nuclear pre-60S ribosomal subunit (State L2)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8flf: Human nuclear pre-60S ribosomal subunit (State L3)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2022-12-21
Authors: Vanden Broeck, A., Klinge, S.
PDB entry 8flg: Bruton's tyrosine kinase in complex with an orthosteric inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-21
Authors: Metrick, C.M., Marcotte, D.J.
PDB entry 8flh: Bruton's tyrosine kinase in complex with an orthosteric inhibitor
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-12-21
Authors: Metrick, C.M., Marcotte, D.J.
PDB entry 8fli: Cryo-EM structure of a group II intron immediately before branching
Classification: SPLICING/RNA
Source organism: Thermosynechococcus vestitus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-12-21
Authors: Haack, D.B., Rudolfs, B.G., Zhang, C., Lyumkis, D., Toor, N.
PDB entry 8flj: Cas1-Cas2/3 integrase and IHF bound to CRISPR leader, repeat and foreign DNA
Classification: RECOMBINATION, DNA BINDING PROTEIN, HYDROLASE/DNA
Source organism: Pseudomonas aeruginosa PA14; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2022-12-21
Authors: Santiago-Frangos, A., Henriques, W.S., Wiegand, T., Gauvin, C., Buyukyoruk, M., Neselu, K., Eng, E.T., Lander, G.C., Wiedenheft, B.
PDB entry 8flk: Cryo-EM structure of STING oligomer bound to cGAMP and NVS-STG2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-12-21
Authors: Li, J., Canham, S.M., Zhang, X., Bai, X., Feng, Y.
PDB entry 8fll: Crystal structure of BTK kinase domain in complex with pirtobrutinib
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.498 Å
Deposited: 2022-12-21
Authors: Cedervall, E.P., Morales, T.H., Allerston, C.K.
PDB entry 8flm: Cryo-EM structure of STING oligomer bound to cGAMP, NVS-STG2 and C53
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-12-21
Authors: Li, J., Canham, S.M., Zhang, X., Bai, X., Feng, Y.
PDB entry 8fln: Crystal structure of BTK C481S kinase domain in complex with pirtobrutinib
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.334 Å
Deposited: 2022-12-21
Authors: Cedervall, E.P., Morales, T.H., Allerston, C.K.
PDB entry 8flo: X-ray crystal structure of substrate free CYP124A1 from Mycobacterium Marinum
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium marinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2022-12-22
Authors: Ghith, A., Bruning, J.B., Bell, S.G.
PDB entry 8flp: NMR Solution Structure of LvIC analogue
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2022-12-22
Authors: Harvey, P.J., Craik, D.J.
PDB entry 8flq: Human PTH1R in complex with PTH(1-34) and Gs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2022-12-22
Authors: Cary, B.P., Belousoff, M.J., Piper, S.J., Wootten, D., Sexton, P.M.
PDB entry 8flr: Human PTH1R in complex with PTHrP and Gs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2022-12-22
Authors: Cary, B.P., Belousoff, M.J., Piper, S.J., Wootten, D., Sexton, P.M.
PDB entry 8fls: Human PTH1R in complex with Abaloparatide and Gs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2022-12-22
Authors: Cary, B.P., Belousoff, M.J., Piper, S.J., Wootten, D., Sexton, P.M.
PDB entry 8flt: Human PTH1R in complex with M-PTH(1-14) and Gs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2022-12-22
Authors: Cary, B.P., Belousoff, M.J., Piper, S.J., Wootten, D., Sexton, P.M.
PDB entry 8flu: Human PTH1R in complex with LA-PTH and Gs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2022-12-22
Authors: Cary, B.P., Belousoff, M.J., Piper, S.J., Wootten, D., Sexton, P.M.
PDB entry 8flv: Bruton's tyrosine kinase in complex with compound 34
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-12-22
Authors: Metrick, C.M., Marcotte, D.J.
PDB entry 8flw: Cryo-EM Structure of PGT145 DU303 Fab in complex with BG505 DS-SOSIP.664
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2022-12-22
Authors: Gorman, J., Kwong, P.D.
PDB entry 8flx: De novo designed homotrimer; the fusion product of BGL17 and DHR59
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 4.5 Å
Deposited: 2022-12-22
Authors: Kibler, R.D., Kennedy, M.A., Stoddard, B.L., Lee, S.
PDB entry 8fly: HIV-1 gp120 complex with BNM-III-170
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2022-12-22
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8flz: HIV-1 gp120 complex with CJF-III-049-S
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-22
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8fm0: HIV-1 gp120 complex with CJF-III-214
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-12-22
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8fm1: Structure of CBASS Cap5 from Pseudomonas syringae in the absence of a ligand (apo form dimer)
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2022-12-22
Authors: Rechkoblit, O., Kreitler, D.F., Aggarwal, A.K.
PDB entry 8fm2: HIV-1 gp120 complex with CJF-III-289
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-12-22
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8fm3: HIV-1 gp120 complex with CJF-III-288
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2022-12-22
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8fm4: HIV-1 gp120 complex with CJF-IV-047
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-12-22
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8fm5: HIV-1 gp120 complex with DY-III-065
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-12-22
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8fm6: Dri1 hemoprotein variant H21A with a zinc-mirror heme site
Classification: METAL BINDING PROTEIN
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-12-22
Authors: Yee, E.F., Blaby-Haas, C.
PDB entry 8fm7: HIV-1 gp120 complex with CJF-III-192
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2022-12-22
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8fm8: HIV-1 gp120 complex with CJF-IV-046
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: HIV-1 06TG.HT008
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2022-12-22
Authors: Gong, Z., Hendrickson, W.A.
PDB entry 8fm9: Nodavirus RNA replication proto-crown, detergent-solubliized C12 multimer
Classification: VIRAL PROTEIN
Source organism: Flock House virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-12-22
Authors: Zhan, H., Unchwaniwala, N., Rebolledo Viveros, A., Pennington, J., Horswill, M., Broadberry, R., Myers, J., den Boon, J., Grant, T., Ahlquist, P.
PDB entry 8fma: Nodavirus RNA replication proto-crown, detergent-solubliized C11 multimer
Classification: VIRAL PROTEIN
Source organism: Flock House virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-12-22
Authors: Zhan, H., Unchwaniwala, N., Rebolledo Viveros, A., Pennington, J., Horswill, M., Broadberry, R., Myers, J., den Boon, J., Grant, T., Ahlquist, P.
PDB entry 8fmb: Nodavirus RNA replication protein A polymerase domain, local refinement
Classification: VIRAL PROTEIN
Source organism: Flock House virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2022-12-22
Authors: Zhan, H., Unchwaniwala, N., Rebolledo Viveros, A., Pennington, J., Horswill, M., Broadberry, R., Myers, J., den Boon, J., Grant, T., Ahlquist, P.
PDB entry 8fmc: Crystal Structure of Kemp Eliminase 1A53-core in unbound state
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2022-12-23
Authors: Zarifi, N., Asthana, P., Fraser, J.S., Chica, R.A.
PDB entry 8fmd: Crystal Structure of Kemp Eliminase KE70-core in unbound state
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-23
Authors: Zarifi, N., Asthana, P., Fraser, J.S., Chica, R.A.
PDB entry 8fme: Crystal Structure of Kemp Eliminase HG3-shell in unbound state
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2022-12-23
Authors: Zarifi, N., Asthana, P., Fraser, J.S., Chica, R.A.
PDB entry 8fmf: Structure of CBASS Cap5 from Pseudomonas syringae as an activated tetramer with the cyclic dinucleotide 3'2'-c-diAMP ligand (1 tetramer in the AU)
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-23
Authors: Rechkoblit, O., Kreitler, D.F., Aggarwal, A.K.
PDB entry 8fmg: Structure of CBASS Cap5 from Pseudomonas syringae as an activated tetramer with the cyclic dinucleotide 3'2'-c-diAMP ligand (3 tetramers in the AU)
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2022-12-23
Authors: Rechkoblit, O., Kreitler, D.F., Aggarwal, A.K.
PDB entry 8fmh: Structure of CBASS Cap5 from Pseudomonas syringae as an activated tetramer with the cyclic dinucleotide 3'2'-c-dGAMP ligand (2 tetramers in the AU)
Classification: IMMUNE SYSTEM
Source organism: Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2022-12-23
Authors: Rechkoblit, O., Kreitler, D.F., Aggarwal, A.K.
PDB entry 8fmi: Crystal structure of human KRAS at 1.12 A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2022-12-23
Authors: Brenner, R., Landgraf, A., Gonzalez-Gutierrez, G., Bum-Erdene, K., Meroueh, S.O.
PDB entry 8fmj: Crystal structure of human KRAS in space group R32
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2022-12-23
Authors: Brenner, R., Landgraf, A., Gonzalez-Gutierrez, G., Bum-Erdene, K., Meroueh, S.O.
PDB entry 8fmk: Crystal structure of human KRAS with extended switch I loop
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2022-12-23
Authors: Brenner, R., Landgraf, A., Gonzalez-Gutierrez, G., Bum-Erdene, K., Meroueh, S.O.
PDB entry 8fml: Cryo-EM structure of NLR family apoptosis inhibitory protein 5 (NAIP5) in complex with a full-length flagellin (FliC) ligand
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2022-12-23
Authors: Paidimuddala, B., Zhang, L.
PDB entry 8fmm: Complex structure of wild type Troponin complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.112 Å
Deposited: 2022-12-23
Authors: Wang, P., Ahmed, M., Sadek, H.
PDB entry 8fmn: Complex structure of K210 deletion Troponin complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.101 Å
Deposited: 2022-12-23
Authors: Wang, P., Ahmed, M., Sadek, H.
PDB entry 8fmo: Complex structure of K210 deletion Troponin complex with risedronate
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.612 Å
Deposited: 2022-12-24
Authors: Wang, P., Ahmed, M., Sadek, H.
PDB entry 8fmp: Complex structure of K210 deletion Troponin complex with pamidronate
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.24 Å
Deposited: 2022-12-24
Authors: Wang, P., Ahmed, M., Sadek, H.
PDB entry 8fmq: Complex structure of K210 deletion Troponin complex with alendronate
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.248 Å
Deposited: 2022-12-24
Authors: Wang, P., Ahmed, M., Sadek, H.
PDB entry 8fmr: Complex structure of K210 deletion Troponin complex with ibandronate
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.238 Å
Deposited: 2022-12-24
Authors: Wang, P., Ahmed, M., Sadek, H.
PDB entry 8fms: Complex structure of K210 deletion Troponin complex with neridronate
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.435 Å
Deposited: 2022-12-24
Authors: Wang, P., Ahmed, M., Sadek, H.
PDB entry 8fmt: Complex structure of TnnT-R205L Troponin complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-12-24
Authors: Wang, P., Ahmed, M., Sadek, H.
PDB entry 8fmu: Crystal structure of human Brachyury G177D variant in complex with SJF-4601
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2022-12-24
Authors: Bebenek, A., Linhares, B., Jaime-Figueroa, S., Butrin, A., Crews, C.
PDB entry 8fmv: Heterodimeric ABC transporter BmrCD in the inward-facing conformation bound to substrate and ATP: BmrCD_IF-2HT/ATP
Classification: TRANSLOCASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2022-12-24
Authors: Tang, Q., Mchaourab, H.
PDB entry 8fmw: The structure of a hibernating ribosome in the Lyme disease pathogen
Classification: RIBOSOME
Source organism: Borreliella burgdorferi B31
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2022-12-25
Authors: Sharma, M.R., Manjari, S.R., Agrawal, E.K., Keshavan, P., Koripella, R.K., Majumdar, S., Marcinkiewicz, A.L., Lin, Y.P., Agrawal, R.K., Banavali, N.K.
PDB entry 8fmx: Langya virus F glycoprotein ectodomain in prefusion form
Classification: VIRAL PROTEIN
Source organism: Langya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2022-12-26
Authors: Low, Y.S., Isaacs, A., Modhiran, N., Watterson, D.
PDB entry 8fmy: Mojiang virus F ectodomain in prefusion form
Classification: VIRAL PROTEIN
Source organism: Mojiang virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2022-12-26
Authors: Low, Y.S., Isaacs, A., Modhiran, N., Watterson, D.