LiteFold/PDB huggingface dataset:
PDB entry 9bqf: Structure of the SARS-CoV-2 main protease in complex with inhibitor 78
Classification: Viral protein, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-09
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqg: Structure of the SARS-CoV-2 main protease in complex with inhibitor k68
Classification: Viral protein, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-05-09
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqh: Cryo-EM structure of the full-length human P2X4 receptor in the apo closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.27 Å
Deposited: 2024-05-09
Authors: Shi, H., Ditter, I.A., Oken, A.C., Mansoor, S.E.
PDB entry 9bqi: Cryo-EM structure of BAY-1797 bound to the full-length human P2X4 receptor in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-05-09
Authors: Shi, H., Ditter, I.A., Oken, A.C., Mansoor, S.E.
PDB entry 9bqj: RO76 bound muOR-Gi1-scFv16 complex structure
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-10
Authors: Wang, H., Majumdar, S., Kobilka, B.K.
PDB entry 9bql: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-A-32
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqm: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-A-26
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqn: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-A-28
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqo: Structure of the SARS-CoV-2 main protease in complex with inhibitor k88
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqp: Structure of the SARS-CoV-2 main protease in complex with inhibitor R79
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqq: Structure of the SARS-CoV-2 main protease in complex with inhibitor R81
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqr: X-ray Structure of a Second-Sphere H-bond Deletion Mutant of a De Novo Designed Self Assembled Peptide Tetramer Featuring a Cu(His)4(H2O) Coordination Motif
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2024-05-10
Authors: Chakraborty, S., Sony, S., Prakash, D., Andi, B.
PDB entry 9bqt: Structure of the SARS-CoV-2 main protease in complex with inhibitor R80
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqv: DdmD dimer apoprotein
Classification: IMMUNE SYSTEM
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-05-10
Authors: Bravo, J.P.K., Taylor, D.W.
PDB entry 9bqw: Fab F945-DbpA complex
Classification: IMMUNE SYSTEM
Source organism: Borreliella burgdorferi; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-05-10
Authors: Rudolph, M.J., Mantis, N.
PDB entry 9bqx: Membrane-bound AMPH-1 tube in the presence of GTP
Classification: LIPID BINDING PROTEIN
Source organism: Caenorhabditis elegans
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.9 Å
Deposited: 2024-05-10
Authors: Wang, Y., Gai, W., Zhang, J., Rye, H.
PDB entry 9bqy: Structure of the SARS-CoV-2 main protease in complex with inhibitor R70
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bqz: Structure of the SARS-CoV-2 main protease in complex with inhibitor x11
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9br0: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-B-84
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9br1: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-A-70
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-05-10
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9br2: Inward-facing, ATP-bound Multidrug Resistance-associated Protein 2 (MRP2) (E1462Q)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2024-05-10
Authors: Koide, E., Chen, J.
PDB entry 9br3: Crystal structure of p53 Y220C mutant in complex with PC-10709
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-05-10
Authors: Abendroth, J., Lorimer, D.D., Vu, B., Tanaka, N.
PDB entry 9br4: Crystal structure of p53 Y220C mutant in complex with PC-9859
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-10
Authors: Abendroth, J., Lorimer, D.D., Vu, B., Takana, N.
PDB entry 9br5: IL1RAP-specific Fab
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-05-10
Authors: Mallett, T.C., Williams, J.C., Park, M.
PDB entry 9br6: Crystal structure of human succinyl-CoA:glutarate-CoA transferase (SUGCT)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-05-10
Authors: Khamrui, S., Lazarus, M.B.
PDB entry 9br7: Crystal structure of human succinyl-CoA:glutarate-CoA transferase (SUGCT) in complex with Losartan carboxylic acid
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-05-10
Authors: Wu, R., Lazarus, M.B.
PDB entry 9bra: Intact V-ATPase State 2 and synaptophysin complex in mouse brain isolated synaptic vesicles
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-05-11
Authors: Wang, C., Jiang, W., Yang, K., Wang, X., Guo, Q., Brunger, A.T.
PDB entry 9brb: Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 1
Classification: PROTON TRANSPORT
Source organism: Legionella pneumophila subsp. pneumophila; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-11
Authors: Coupland, C.E., Rubinstein, J.L.
PDB entry 9brc: Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 2
Classification: PROTON TRANSPORT
Source organism: Legionella pneumophila subsp. pneumophila; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-05-11
Authors: Coupland, C.E., Rubinstein, J.L.
PDB entry 9brd: Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3
Classification: PROTON TRANSPORT
Source organism: Legionella pneumophila subsp. pneumophila str. Philadelphia 1; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-05-11
Authors: Coupland, C.E., Rubinstein, J.L.
PDB entry 9bre: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL019-21
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brf: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL004-21
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brg: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL055-22
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brh: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL056-21
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.69 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9bri: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL064-22
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brj: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL093-22
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brk: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL098-22
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brl: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL080-22
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brm: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL077-22
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brn: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL050-22
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9bro: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL030-22
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brp: Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL047-22
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-11
Authors: Chen, Y., Tesmer, J.J.G.
PDB entry 9brq: Intact V-ATPase State 3 and synaptophysin complex in mouse brain isolated synaptic vesicles
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-05-11
Authors: Wang, C., Jiang, W., Yang, K., Wang, X., Guo, Q., Brunger, A.T.
PDB entry 9brr: Intact V-ATPase State 3 in synaptophysin knock-out isolated synaptic vesicles
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2024-05-11
Authors: Wang, C., Jiang, W., Yang, K., Wang, X., Guo, Q., Brunger, A.T.
PDB entry 9brs: Intact V-ATPase State 2 in synaptophysin knock-out isolated synaptic vesicles
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2024-05-11
Authors: Wang, C., Jiang, W., Yang, K., Wang, X., Guo, Q., Brunger, A.T.
PDB entry 9brt: Intact V-ATPase State 1 and synaptophysin complex in mouse brain isolated synaptic vesicles
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-05-11
Authors: Wang, C., Jiang, W., Yang, K., Wang, X., Guo, Q., Brunger, A.T.
PDB entry 9bru: Intact V-ATPase State 1 in synaptophysin knock-out isolated synaptic vesicles
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2024-05-11
Authors: Wang, C., Jiang, W., Yang, K., Wang, X., Guo, Q., Brunger, A.T.
PDB entry 9brv: SARS-CoV-2 Papain-like Protease (PLpro) with Fragment 5
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-05-11
Authors: Amporndanai, K., Zhao, B., Fesik, S.W.
PDB entry 9brw: SARS-CoV-2 Papain-like Protease (PLpro) with Fragment 7
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-11
Authors: Amporndanai, K., Zhao, B., Fesik, S.W.
PDB entry 9brx: SARS-CoV-2 Papain-like Protease (PLpro) with Fragment 10
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-11
Authors: Amporndanai, K., Zhao, B., Fesik, S.W.
PDB entry 9bry: V0-only V-ATPase in synaptophysin gene knock-out mouse brain isolated synaptic vesicles
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-12
Authors: Wang, C., Jiang, W., Yang, K., Wang, X., Guo, Q., Brunger, A.T.
PDB entry 9brz: V0-only V-ATPase and synaptophysin complex in mouse brain isolated synaptic vesicles
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-05-12
Authors: Wang, C., Jiang, W., Yang, K., Wang, X., Guo, Q., Brunger, A.T.
PDB entry 9bs0: YphC-treated 45SYphC particle. Class 5
Classification: RIBOSOME
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-12
Authors: Arpin, D., Ortega, J.
PDB entry 9bs1: Cryo-EM structure of the S. cerevisiae lipid flippase Neo1 bound with PI4P in the E2P state
Classification: LIPID TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2024-05-12
Authors: Duan, H.D., Li, H.
PDB entry 9bs2: Glycosylase MutY variant R149Q in complex with DNA containing d(8-oxo-G) paired with a product analog (THF) to 1.51 A resolution
Classification: HYDROLASE/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2024-05-12
Authors: Trasvina-Arenas, C.H., Tamayo, N., Lin, W.J., Demir, M., Fisher, A.J., David, S.S., Horvath, M.P.
PDB entry 9bs3: Wild type DNA Ligase 1 with 5'-rG:C
Classification: LIGASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2024-05-12
Authors: KanalElamparithi, B., Caglayan, M.
PDB entry 9bs4: DNA Ligase 1 E346A/E592A double mutant with 5'-rG:C
Classification: Ligase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-05-12
Authors: KanalElamparithi, B., Caglayan, M.
PDB entry 9bs5: Bacteroides ovatus GH97C Sus
Classification: HYDROLASE
Source organism: Bacteroides ovatus ATCC 8483
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2024-05-13
Authors: Brown, H.A., Koropatkin, N.M.
PDB entry 9bs6: CryoEM structure of ThermoCas9 in post-cleavage state with a DNA containing NNNNCGA PAM
Classification: HYDROLASE/DNA/RNA
Source organism: Geobacillus thermodenitrificans; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-05-13
Authors: Zhao, Y., Shu, Y.
PDB entry 9bs7: Structure of the SARS-CoV-2 main protease in complex with inhibitor Vinylpyridine
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bs8: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-B-107
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bs9: Local refinement of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.28 Å
Deposited: 2024-05-13
Authors: Kim, K., Gumpper, R.H., Fay, J.F., Roth, B.L.
PDB entry 9bsa: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-B-112
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bsb: Global reconstruction of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2024-05-13
Authors: Kim, K., Gumpper, R.H., Fay, J.F., Roth, B.L.
PDB entry 9bse: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-B-165
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bsf: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-A-171
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bsg: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-C-20
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bsh: Staphylococcus aureus exfoliative toxin A D164A variant
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-05-13
Authors: Holyoak, T., Tran, N.
PDB entry 9bsi: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-B-7
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bsl: 45SRbgA particle in complex with RbgA and YphC. Class A
Classification: RIBOSOME
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-13
Authors: Arpin, D., Ortega, J.
PDB entry 9bsm: Staphylococcus aureus exfoliative toxin A D164E variant
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2024-05-13
Authors: Holyoak, T., Tran, N.
PDB entry 9bsn: Structure of human K2P13.1 (THIK-1) in lipid nanodisc
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-05-13
Authors: Roy-Chowdhury, S., Minor, D.L.
PDB entry 9bso: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-B-13
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bsp: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-C-68
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bsq: Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-C-70
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bsr: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-B-136B
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bss: 45SRbgA particle in complex with RbgA and YphC. Class B
Classification: RIBOSOME
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-13
Authors: Arpin, D., Ortega, J.
PDB entry 9bst: Structure of the SARS-CoV-2 main protease in complex with inhibitor CID8009_5647
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-05-13
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bsu: EBOV GP/Nanosota-EB1
Classification: VIRAL PROTEIN
Source organism: Ebola virus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-05-13
Authors: Bu, F., Ye, G., Liu, B., Li, F.
PDB entry 9bsv: EBOV GP/Nanosota-EB2 complex
Classification: VIRAL PROTEIN
Source organism: Ebola virus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-13
Authors: Bu, F., Ye, G., Liu, B., Li, F.
PDB entry 9bsw: Cryo-EM structure of HCoV-HKU1 Spike glycoprotein (DDA state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9bsx: Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (DAA state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9bsy: Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (DAU state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9bsz: Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (AUU state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9bt0: Cryo-EM structure of HCoV-HKU1 Spike glycoprotein (DDD state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.23 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9bt1: Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (UUU state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9bt2: Cryo-EM structure of HCoV-HKU1 glycoprotein D1 (Down State, locally refined)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.93 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9bt3: Crystal structure of Chorismate Mutase from Mycobacterium tuberculosis in complex with the cyclic peptide inhibitor L2.1 (triclinic form)
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-14
Authors: Liu, L., Lovell, S., Battaile, K.P., Inglese, J.
PDB entry 9bt4: Pyruvate:Ferredoxin Oxidoreductase from Methanosarcina acetivorans
Classification: ELECTRON TRANSPORT
Source organism: Methanosarcina acetivorans C2A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2024-05-14
Authors: Catlin, D., Nair, S.J.
PDB entry 9bt5: The crystal structure of the HA1 domain of hemagglutinin from A/Shanghai/02/2013 (H7N9) bound to H7-235 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/Shanghai/02/2013(H7N9))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-14
Authors: Buchman, C.D., Dong, J., Crowe, J.E.
PDB entry 9bt6: Crystal structure of Chorismate Mutase from Mycobacterium tuberculosis in complex with the cyclic peptide inhibitor L2.1 (monoclinic P form)
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-14
Authors: Liu, L., Lovell, S., Battaile, K.P., Inglese, J.
PDB entry 9bt7: Crystal structure of Chorismate Mutase from Mycobacterium tuberculosis in complex with the cyclic peptide inhibitor D1.3
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-14
Authors: Liu, L., Lovell, S., Battaile, K.P., Inglese, J.
PDB entry 9bt8: Structure of Src in complex with beta-arrestin 1 revealing SH3 binding sites
Classification: SIGNALING PROTEIN
Source organism: Bacteriophage sp.; Gallus gallus; Lama glama; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2024-05-14
Authors: Pakharukova, N., Bansia, H., Bassford, D.K., des Georges, A., Lefkowitz, R.J.
PDB entry 9bt9: Cryo-EM Structure of HKU1 spike D1 Domain (Active state, locally refined)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.11 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9bta: Cryo-EM density map of HKU1 spike glycoprotein D1 domain in complex with 9O-acetyl GD3 sialoglycan (Down_alt state, locally refined)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9btb: Cryo-EM density map of HKU1 spike glycoprotein D1 domain in complex with 9O-acetyl GD3 sialoglycan (Active state, locally refined)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9btc: Cryo-EM density map of HKU1 spike glycoprotein D1 domain in complex with 9O-acetyl GD3 sialoglycan (Up state, locally refined)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.41 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9btd: Cryo-EM structure of HCoV-HKU1 glycoprotein in complex with 9O-acetyl GD3 sialoglycan (DDA state)
Classification: VIRAL PROTEIN
Source organism: Human coronavirus HKU1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2024-05-14
Authors: Jin, M., Rini, J.M.
PDB entry 9bte: Structure of the SARS-CoV-2 main protease in complex with inhibitor CID5573_0017
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-05-15
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9btf: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-B-77
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-15
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9btg: Human SCNN1B-SCNN1B-SCNN1G ENaC trimer
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2024-05-15
Authors: Houser, A., Baconguis, I.
PDB entry 9bth: Rhesus Fab 42056-a.01 in complex with CAP256SU.wk34 RnS SOSIP Env
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-05-15
Authors: Gorman, J., Kwong, P.D.
PDB entry 9bti: Rhesus Fab 40591-a.01 in complex with T250.4 RnS SOSIP Env
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.14 Å
Deposited: 2024-05-15
Authors: Gorman, J., Kwong, P.D.
PDB entry 9btj: Rhesus Fab 6561-a.01 in complex with HIV-1 Ce1176.A3 RnS SOSIP Env
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.22 Å
Deposited: 2024-05-15
Authors: Gorman, J., Kwong, P.D.
PDB entry 9btk: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-C-108T
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-05-15
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9btl: Cryo-EM structure of rhesus antibody 41328-a.01 in complex with HIV-1 Env BG505 DS-SOSIP
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-05-15
Authors: Roark, R.S., Shapiro, L., Kwong, P.D.
PDB entry 9btm: NRas 1-169 Q61R in Complex with Shoc2 80-582
Classification: SIGNALING PROTEIN/HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2024-05-15
Authors: Hauseman, Z.J., King, D., Viscomi, J., Fodor, M.
PDB entry 9btn: Structure of human SHOC2 in complex with a cyclic peptide
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-05-15
Authors: Hauseman, Z.J., Dhembi, A., King, D.
PDB entry 9bto: Influenza hemagglutinin B/Maryland/2016 glycoprotein
Classification: VIRAL PROTEIN
Source organism: Influenza B virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-15
Authors: Torrents de la Pena, A., Sewall, L.M., Ward, A.B.
PDB entry 9btp: Structure of human SHOC2 in complex with a small molecule inhibitor (S)-5
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2024-05-15
Authors: Dhembi, A., Hauseman, Z.J., King, D.
PDB entry 9btq: Cryo-EM structure of extracellular tube from Microcystis Aeruginosa pcc 7806SL
Classification: PROTEIN FIBRIL
Source organism: Microcystis aeruginosa PCC 7806SL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-05-15
Authors: Petersen, H.A., Ricca, J.G., Louda, J.W., Wang, F.
PDB entry 9btr: Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-C-163
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-05-15
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9bts: Crystal structure of the bacterioferritin (Bfr) and ferritin (Ftn) heterooligomer complex from Acinetobacter baumannii
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii ATCC 17978
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-05-15
Authors: Lovell, S., Liu, L., Battaile, K.P., Rivera, M.
PDB entry 9btt: Structure of the SARS-CoV-2 main protease in complex with inhibitor SR-B-51T
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-15
Authors: Blankenship, L.R., Liu, W.R.
PDB entry 9btu: Human SCNN1B-SCNN1G ENaC dimers
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2024-05-15
Authors: Houser, A., Baconguis, I.
PDB entry 9btv: Cryo-EM structure of rhesus antibody T646-a.01 in complex with HIV-1 Env trimer Q23.17 MD39
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2024-05-15
Authors: Roark, R.S., Shapiro, L., Kwong, P.D.
PDB entry 9btw: Human Amylin3 Receptor in complex with Gs and cagrilintide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-15
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Sexton, P.M., Wootten, D.L.
PDB entry 9btx: Structure of human MAIT A-F7 TCR in complex with human MR1-3,4-dihydroxybenzaldehyde
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-05-15
Authors: Awad, W., Rossjohn, J.
PDB entry 9bty: Structure of human MAIT A-F7 TCR in complex with human MR1-veratraldehyde
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-05-15
Authors: Awad, W., Rossjohn, J.
PDB entry 9btz: Structure of human MAIT A-F7 TCR in complex with human MR1-nicotinaldehyde
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-05-15
Authors: Awad, W., Rossjohn, J.
PDB entry 9bu0: Structure of human MAIT A-F7 TCR in complex with human MR1-salicylaldehyde
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2024-05-15
Authors: Awad, W., Rossjohn, J.
PDB entry 9bu1: Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with (6'-hydroxy-1'-(4-((1-propylazetidin-3-yl)methoxy)phenyl)-1',4'-dihydro-2'H-spiro[cyclopropane-1,3'-isoquinolin]-2'-yl)(phenyl)methanone
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-05-16
Authors: Young, K.S., Fanning, S.W.
PDB entry 9bu2: Homomeric alpha3 glycine receptor in the presence of 1 mM glycine at pH 6.4 in a desensitized state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2024-05-16
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bu3: Homomeric alpha3 glycine receptor in the presence of 0.1 mM glycine in a desensitized state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-16
Authors: Kindig, K., Gibbs, E., Chakrapani, S.
PDB entry 9bu4: Crystal structure of an MKP5 mutant, Y435W, in complex with an allosteric inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-05-16
Authors: Manjula, R., Bennett, A.M., Lolis, E.
PDB entry 9bu5: CC ProXp-ala apo solution structure
Classification: RNA BINDING PROTEIN
Source organism: Caulobacter vibrioides
Experimental method: SOLUTION NMR
Deposited: 2024-05-16
Authors: Duran, A.D., Foster, M.P.
PDB entry 9bu6: Vaccine elicited Fab C968.180 with influenza H10 JD13 HA trimer
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2024-05-16
Authors: Gorman, J., Kwong, P.D.
PDB entry 9bu7: Cryo-EM Structure of AAV2 Rep68 bound to integration site AAVS1: Insights into the mechanism of DNA melting.
Classification: VIRAL PROTEIN/DNA
Source organism: adeno-associated virus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2024-05-16
Authors: Escalante, C.R.
PDB entry 9bu8: Vaccine elicited Fab c115.131 with influenza H10 JD13 HA trimer
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2024-05-16
Authors: Gorman, J., Kwong, P.D.
PDB entry 9bu9: Mixed-valent (2/3) dimanganese SfbO
Classification: OXIDOREDUCTASE
Source organism: Litorilinea aerophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2024-05-16
Authors: Liu, C., Rittle, J.
PDB entry 9bua: SfbO reconstituted with Mn(II) anaerobically
Classification: OXIDOREDUCTASE
Source organism: Litorilinea aerophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2024-05-16
Authors: Liu, C., Rittle, J.
PDB entry 9bub: Human calcitonin Receptor in complex with Gs and cagrilintide in the bypass conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-05-16
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Sexton, P.M., Wootten, D.L.
PDB entry 9buc: Human calcitonin Receptor in complex with Gs and cagrilintide in the bypass conformation (repeat)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-05-16
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Sexton, P.M., Wootten, D.L.
PDB entry 9bud: Human calcitonin Receptor in complex with Gs and cagrilintide in the CT-like conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-16
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Sexton, P.M., Wootten, D.L.
PDB entry 9bue: Human calcitonin Receptor in complex with Gs and cagrilintide in the CT-like conformation (repeat)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-16
Authors: Cao, J., Belousoff, M.J., Johnson, R.M., Sexton, P.M., Wootten, D.L.
PDB entry 9buf: Hydrolase domain of Chitinase 1 from Streptomyces venezuelae
Classification: HYDROLASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-05-17
Authors: Dalton, J.A.T., Smith, O.B., Frkic, R.L., Jackson, C.J.
PDB entry 9bug: Hydrolase domain of Chitinase 1 from Enterobacter cloacae
Classification: HYDROLASE
Source organism: Enterobacter cloacae complex sp. ECNIH14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-05-17
Authors: Dalton, J.A.T., Frkic, R.L., Jackson, C.J.
PDB entry 9buh: Cryo-EM structure of respiratory supercomplex I III IV
Classification: ELECTRON TRANSPORT
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-17
Authors: Zhang, Z., Maharjan, R., Tringides, M.
PDB entry 9bui: M1A Midnolin-Proteasome (with Ubl)
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2024-05-17
Authors: Gao, J., Yip, M.C.J., Shao, S.
PDB entry 9buj: Structure of PfPL1 from Pseudoalteromonas fuliginea
Classification: LYASE
Source organism: Pseudoalteromonas fuliginea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-05-17
Authors: Boraston, A.B., Hobbs, J.K.
PDB entry 9buk: Outward-facing, ATP-bound Multidrug Resistance-associated Protein 2 (MRP2) (E1462Q)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-05-17
Authors: Koide, E., Chen, J.
PDB entry 9bum: Structure of gamma-glutamyl carboxylase (GGCX)
Classification: MEMBRANE PROTEIN,LYASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2024-05-17
Authors: Wang, R., Qi, X.
PDB entry 9bun: RhoBAST aptamer RNA in complex with 5(6)-carboxytetramethylrhodamine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-17
Authors: Batey, R.T., Siwik, S.H.
PDB entry 9buo: CryoEM structure of DPOR in the presence of ADP-AlF3
Classification: OXIDOREDUCTASE
Source organism: Cereibacter sphaeroides
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2024-05-17
Authors: Kashyap, R., Antony, E.
PDB entry 9bup: Single particle CryoEM structure of the Pf80S ribosome in non-rotated PRE state (nrt A-P-E)
Classification: RIBOSOME
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-05-17
Authors: Anton, L., Haile, M., Ho, C.M.
PDB entry 9buq: Single particle cryoEM structure of the Pf80S ribosome in the POST state (nrt with P- and E-site tRNA)
Classification: RIBOSOME
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-05-17
Authors: Anton, L., Haile, M., Ho, C.M.
PDB entry 9bur: Structure of GGCX-BGP complex
Classification: MEMBRANE PROTEIN,LYASE/SUBSTRATE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-05-17
Authors: Wang, R., Qi, X.
PDB entry 9bus: Single particle CryoEM structure of the Pf80S ribosome in the unloaded state (nrt with E-site tRNA)
Classification: RIBOSOME
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-05-17
Authors: Anton, L., Haile, M., Ho, C.M.
PDB entry 9but: Single particle CryoEM structure of the Pf80S ribosome in the rotated-2 PRE state (rt state with P and E-site tRNA)
Classification: RIBOSOME
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-17
Authors: Anton, L., Haile, M., Ho, C.M.
PDB entry 9buu: Single particle CryoEM structure of the Pf80S ribosome in rotated state with E-site tRNA
Classification: RIBOSOME
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-17
Authors: Anton, L., Haile, M., Ho, C.M.
PDB entry 9buv: Crystal structure of Cry1Fa R226Q
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.024 Å
Deposited: 2024-05-17
Authors: Poland, B.W., Kakani, K., Yamamoto, T.
PDB entry 9bux: Structure of GGCX-BGP-menaquinone-4 epoxide complex
Classification: MEMBRANE PROTEIN,LYASE/SUBSTRATE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-05-17
Authors: Wang, R., Qi, X.
PDB entry 9buy: Structure of the LM189-Bound beta2AR-Gi Complex
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-17
Authors: Casiraghi, M., Wang, H., Kobilka, B.K.
PDB entry 9buz: Thermoplasma acidophilum 20S proteasome - alphaV24Y
Classification: HYDROLASE
Source organism: Thermoplasma acidophilum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.38 Å
Deposited: 2024-05-18
Authors: Chuah, J., Smith, D.
PDB entry 9bv0: NMR structure of the Z0 CCHC zinc-finger of transcription repressor Bcl11A
Classification: METAL BINDING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-05-18
Authors: Alexandrescu, A.T.
PDB entry 9bv1: M2A Midnolin-Proteasome (translocating)
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-19
Authors: Gao, J., Yip, M.C.J., Shao, S.
PDB entry 9bv2: M2B Midnolin-Proteasome (translocating)
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-05-19
Authors: Gao, J., Yip, M.C.J., Shao, S.
PDB entry 9bv3: M1B Midnolin-Proteasome
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-19
Authors: Gao, J., Yip, M.C.J., Shao, S.
PDB entry 9bv4: NMR Solution Structure of Excelsatoxin A in DPC micelles
Classification: TOXIN
Source organism: Dendrocnide excelsa
Experimental method: SOLUTION NMR
Deposited: 2024-05-19
Authors: Saipriyaa, P.V., Chin, Y.K., Mehdi, M.
PDB entry 9bv5: Crystal structure of human CYP3A4 in complex with SJ000362065
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2024-05-20
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.
PDB entry 9bv6: Crystal structure of human CYP3A4 in complex with SJ000388260
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-05-20
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.
PDB entry 9bv7: Crystal structure of human CYP3A4 in complex with SJ000310315
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2024-05-20
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.
PDB entry 9bv8: Crystal structure of human CYP3A4 in complex with SJYHJ-114
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-05-20
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.
PDB entry 9bv9: Crystal structure of human CYP3A4 in complex with Z56791366
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2024-05-20
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.
PDB entry 9bva: Crystal structure of human CYP3A4 in complex with SJYHJ-106
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2024-05-20
Authors: Jingheng, W., Nithianantham, S., Miller, D.J., Chen, T.