LiteFold/PDB huggingface dataset:
PDB entry 5k0r: Crystal structure of reduced Shewanella Yellow Enzyme 4 (SYE4)
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-05-17
Authors: Elegheert, J., Brige, A., Savvides, S.N.
PDB entry 5k0s: Crystal structure of methionyl-tRNA synthetase MetRS from Brucella melitensis in complex with inhibitor Chem 1312
Classification: ligase/ligase inhibitor
Source organism: Brucella suis biovar 1 (strain 1330)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2016-05-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5k0t: Crystal structure of methionyl-tRNA synthetase MetRS from Brucella melitensis in complex with inhibitor Chem 1415
Classification: LIGASE
Source organism: Brucella suis biovar 1 (strain 1330)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-05-17
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5k0u: CryoEM structure of the full virion of a human rhinovirus C
Classification: VIRUS
Source organism: Rhinovirus C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2016-05-17
Authors: Liu, Y., Hill, M.G., Klose, T., Chen, Z., Watters, K.E., Jiang, W., Palmenberg, A.C., Rossmann, M.G.
PDB entry 5k0w: Crystal structure of the metallo-beta-lactamase GOB-18 from Elizabethkingia meningoseptica
Classification: HYDROLASE
Source organism: Elizabethkingia meningoseptica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2016-05-17
Authors: Buschiazzo, A., Larrieux, N., Vila, A.J., Lisa, M.N., Moran-Barrio, J.
PDB entry 5k0x: Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC2541
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.231 Å
Deposited: 2016-05-17
Authors: McIver, A.L., Zhang, W., Liu, Q., Jiang, X., Stashko, M.A., Nichols, J., Miley, M.J., Norris-Drouin, J., Machius, M., DeRyckere, D., Wood, E., Graham, D.K., Earp, H.S., Kireev, D., Frye, S.V., Wang, X.
PDB entry 5k0y: m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit face
Classification: TRANSLATION
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.8 Å
Deposited: 2016-05-17
Authors: Simonetti, A., Brito Querido, J., Myasnikov, A.G., Mancera-Martinez, E., Renaud, A., Kuhn, L., Hashem, Y.
PDB entry 5k0z: Cryo-EM structure of lactate dehydrogenase (LDH) in inhibitor-bound state
Classification: OXIDOREDUCTASE
Source organism: Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2016-05-17
Authors: Merk, A., Bartesaghi, A., Banerjee, S., Falconieri, V., Rao, P., Earl, L., Milne, J., Subramaniam, S.
PDB entry 5k10: Cryo-EM structure of isocitrate dehydrogenase (IDH1)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2016-05-17
Authors: Merk, A., Bartesaghi, A., Banerjee, S., Falconieri, V., Rao, P., Earl, L., Milne, J., Subramaniam, S.
PDB entry 5k11: Cryo-EM structure of isocitrate dehydrogenase (IDH1) in inhibitor-bound state
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2016-05-17
Authors: Merk, A., Bartesaghi, A., Banerjee, S., Falconieri, V., Rao, P., Earl, L., Milne, J., Subramaniam, S.
PDB entry 5k12: Cryo-EM structure of glutamate dehydrogenase at 1.8 A resolution
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.8 Å
Deposited: 2016-05-17
Authors: Merk, A., Bartesaghi, A., Banerjee, S., Falconieri, V., Rao, P., Earl, L., Milne, J., Subramaniam, S.
PDB entry 5k13: Crystal structure of the RAR alpha ligand-binding domain in complex with an antagonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-05-17
Authors: Wang, Y., Stout, S.L.
PDB entry 5k14: HIV-1 Reverse Transcriptase in complex with a 2,6-difluorophenyl DAPY analog
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate HXB2); Human immunodeficiency virus type 1 group M subtype B (isolate LW123)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2016-05-17
Authors: Lansdon, E.B.
PDB entry 5k15: Crystal structure of laccase from Thermus thermophilus HB27 (Cu2PO, 8 min)
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-05-17
Authors: Diaz-Vilchis, A., Ruiz-Arellano, R.R., Rosas-Benitez, E., Rudino-Pinera, E.
PDB entry 5k16: Crystal structure of free Ubiquitin-specific protease 12
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.599 Å
Deposited: 2016-05-17
Authors: Li, H., D'Andrea, A.D., Zheng, N.
PDB entry 5k17: Crystal structure of CREN7-DSDNA (GTGATCGC) complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Sulfolobus solfataricus P2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-05-17
Authors: Zhang, Z.F., Gong, Y.
PDB entry 5k18: The NatB Acetyltransferase Complex Bound To bisubstrate inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Candida albicans WO-1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2016-05-17
Authors: Hong, H., Cai, Y., Zhang, S., Han, A.
PDB entry 5k19: Crystal structure of WD repeat-containing protein 20
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.602 Å
Deposited: 2016-05-17
Authors: Li, H., D'Andrea, A.D., Zheng, N.
PDB entry 5k1a: Crystal structure of the UAF1-USP12 complex in C2 space group
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-05-18
Authors: Li, H., D'Andrea, A.D., Zheng, N.
PDB entry 5k1b: Crystal structure of the UAF1/USP12 complex in F222 space group
Classification: PROTEIN BINDING/HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2016-05-18
Authors: Li, H., D'Andrea, A.D., Zheng, N.
PDB entry 5k1c: Crystal structure of the UAF1/WDR20/USP12 complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-05-18
Authors: Li, H., D'Andrea, A.D., Zheng, N.
PDB entry 5k1d: Crystal structure of a class C beta lactamase/compound1 complex
Classification: HYDROLASE
Source organism: Enterobacter aerogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2016-05-18
Authors: AN, Y.J., Na, J.H., Cha, S.S.
PDB entry 5k1f: Crystal structure of a class C beta lactamase/compound2 complex
Classification: HYDROLASE
Source organism: Enterobacter aerogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2016-05-18
Authors: An, Y.J., Na, J.H., Cha, S.S.
PDB entry 5k1g: Crystal structure of reduced Prx3 from Vibrio vulnificus
Classification: OXIDOREDUCTASE
Source organism: Vibrio vulnificus MO6-24/O
Experimental method: X-RAY DIFFRACTION
Resolution: 1.899 Å
Deposited: 2016-05-18
Authors: Ahn, J., Ha, N.-C.
PDB entry 5k1h: eIF3b relocated to the intersubunit face to interact with eIF1 and below the eIF2 ternary-complex. from the structure of a partial yeast 48S preinitiation complex in closed conformation.
Classification: TRANSLATION
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2016-05-18
Authors: Simonetti, A., Brito Querido, J., Myasnikov, A.G., Mancera-Martinez, E., Renaud, A., Kuhn, L., Hashem, Y.
PDB entry 5k1i: PDE4 crystal structure in complex with small molecule inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2016-05-18
Authors: Segarra, V., Hernandez, B., Ferrer-Miralles, N., Korndoerfer, I., Aymami, J.
PDB entry 5k1j: Human TTR altered by a rhenium tris-carbonyl Pyta-C8 derivative
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2016-05-18
Authors: Stura, E.A., Ciccone, L., Shepard, W.
PDB entry 5k1k: Crystal structure of oxidized Shewanella Yellow Enzyme 4 (SYE4) in complex with p-hydroxybenzaldehyde
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis MR-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.301 Å
Deposited: 2016-05-18
Authors: Elegheert, J., Brige, A., Savvides, S.-N.
PDB entry 5k1l: Dehaloperoxidase B from Amphitrite ornata: benzimidazole complex
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2016-05-18
Authors: Moreno Chicano, T., Hough, M.A.
PDB entry 5k1m: Crystal structure of oxidized Shewanella Yellow Enzyme 4 (SYE4) in complex with p-methoxyphenol
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-05-18
Authors: Elegheert, J., Brige, A., Savvides, S.N.
PDB entry 5k1n: Human TTR altered by a rhenium tris-carbonyl Pyta-C12 derivative
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2016-05-18
Authors: Stura, E.A., Ciccone, L., Shepard, W.
PDB entry 5k1p: Catalytic domain of polyspecific pyrrolysyl-tRNA synthetase mutant N346A/C348A in complex with AMPPNP
Classification: LIGASE
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.499 Å
Deposited: 2016-05-18
Authors: Weber, A.
PDB entry 5k1q: Crystal structure of oxidized Shewanella Yellow Enzyme 4 (SYE4) in complex with p-methylphenol
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-05-18
Authors: Elegheert, J., Brige, A., Savvides, S.N.
PDB entry 5k1r: Structure of Burkholderia pseudomallei K96243 sphingosine-1-phosphate lyase Bpss2021
Classification: LYASE
Source organism: Burkholderia pseudomallei K96243
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2016-05-18
Authors: Mclean, C.J., Campopiano, D.J., Marles-Wright, J.
PDB entry 5k1s: crystal structure of AibC
Classification: OXIDOREDUCTASE
Source organism: Myxococcus xanthus (strain DK 1622)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2016-05-18
Authors: Bock, T., Mueller, R., Blankenfeldt, W.
PDB entry 5k1u: Crystal structure of reduced Shewanella Yellow Enzyme 4 (SYE4) in complex with the hydride Meisenheimer complex of trinitrophenol
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.551 Å
Deposited: 2016-05-18
Authors: Elegheert, J., Brige, A., Savvides, S.N.
PDB entry 5k1v: Crystal structure of Endoplasmic Reticulum aminopeptidase 2 (ERAP2) in complex with a diaminobenzoic acid derivative ligand.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.897 Å
Deposited: 2016-05-18
Authors: Saridakis, E., Papakyriakou, A., Giastas, P., Mpakali, A., Mavridis, I.M., Stratikos, E.
PDB entry 5k1w: Crystal structure of oxidized Shewanella Yellow Enzyme 4 (SYE4) in complex with trinitrophenol
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-05-18
Authors: Elegheert, J., Brige, A., Savvides, S.N.
PDB entry 5k1x: Catalytic domain of polyspecific pyrrolysyl-tRNA synthetase mutant Y306A/N346A/C348A/Y384F in complex with AMPPNP
Classification: LIGASE
Source organism: Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-05-18
Authors: Weber, A.
PDB entry 5k1y: P2(1) Structure of pNOB8 AspA-DNA complex
Classification: TRANSCRIPTION/DNA
Source organism: Sulfolobus sp. NOB8H2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2016-05-18
Authors: Schumacher, M.
PDB entry 5k1z: Joint X-ray/neutron structure of MTAN complex with p-ClPh-Thio-DADMe-ImmA
Classification: HYDROLASE
Source organism: Helicobacter pylori
Experimental method: NEUTRON DIFFRACTION, X-RAY DIFFRACTION
Deposited: 2016-05-18
Authors: Banco, M.T., Kovalevsky, A.Y., Ronning, D.R.
PDB entry 5k20: Caspase-7 S239E Phosphomimetic
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-05-18
Authors: Eron, S.J., Hardy, J.A.
PDB entry 5k21: Pyocyanin demethylase
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium fortuitum subsp. fortuitum DSM 46621 = ATCC 6841
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-05-18
Authors: Costa, K.C., Glasser, N.R., Newman, D.K.
PDB entry 5k22: Crystal structure of the complex between human PRL-2 phosphatase in reduced state and Bateman domain of human CNNM3
Classification: TRANSPORT PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-05-18
Authors: Kozlov, G., Wu, H., Gehring, K.
PDB entry 5k23: Crystal structure of the complex between human phosphatase PRL-2 in the oxidized state with the Bateman domain of human magnesium transporter CNNM3
Classification: HYDROLASE/TRANSPORTER PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2016-05-18
Authors: Gulerez, I., Kozlov, G., Gehring, K.
PDB entry 5k24: Crystal structure of the complex between phosphatase PRL-2 in the oxidized state with the Bateman domain of murine magnesium transporter CNNM3
Classification: HYDROLASE/TRANSPORTER PROTEIN/PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2016-05-18
Authors: Kozlov, G., Gulerez, I., Gehring, K.
PDB entry 5k25: Crystal structure of human phosphatase PRL-2 in complex with the ADP-bound Bateman domain of human magnesium transporter CNNM3
Classification: HYDROLASE/TRANSPORTER PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2016-05-18
Authors: Gulerez, I., Kozlov, G., Gehring, K.
PDB entry 5k26: Structure of the SH3 domain of MLK3 bound to peptide generated from phage display
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2016-05-18
Authors: Kall, S.K., Lavie, A.
PDB entry 5k27: Crystal structure of ancestral protein ancMT of ADP-dependent sugar kinases family.
Classification: TRANSFERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2016-05-18
Authors: Castro-Fernandez, V., Herrera-Morande, A., Zamora, R., Merino, F., Pereira, H.M., Brandao-Neto, J., Garratt, R., Guixe, V.
PDB entry 5k28: Structure of the unbound SH3 domain of MLK3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-05-18
Authors: Kall, S.K., Lavie, A.
PDB entry 5k29: Trypanosoma brucei bromodomain BDF5 (Tb427tmp.01.5000)
Classification: Structural Genomics, Unknown Function
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-05-18
Authors: Lin, Y.H., Tempel, W., Walker, J.R., Loppnau, P., Amani, M., Hou, C.F.D., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Hui, R., Structural Genomics Consortium (SGC)
PDB entry 5k2a: 2.5 angstrom A2a adenosine receptor structure with sulfur SAD phasing using XFEL data
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens, Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-05-18
Authors: Batyuk, A., Galli, L., Ishchenko, A., Han, G.W., Gati, C., Popov, P., Lee, M.-Y., Stauch, B., White, T.A., Barty, A., Aquila, A., Hunter, M.S., Liang, M., Boutet, S., Pu, M., Liu, Z.-J., Nelson, G., James, D., Li, C., Zhao, Y., Spence, J.C.H., Liu, W., Fromme, P., Katritch, V., Weierstall, U., Stevens, R.C., Cherezov, V., GPCR Network (GPCR)
PDB entry 5k2b: 2.5 angstrom A2a adenosine receptor structure with MR phasing using XFEL data
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens, Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-05-18
Authors: Batyuk, A., Galli, L., Ishchenko, A., Han, G.W., Gati, C., Popov, P., Lee, M.-Y., Stauch, B., White, T.A., Barty, A., Aquila, A., Hunter, M.S., Liang, M., Boutet, S., Pu, M., Liu, Z.-J., Nelson, G., James, D., Li, C., Zhao, Y., Spence, J.C.H., Liu, W., Fromme, P., Katritch, V., Weierstall, U., Stevens, R.C., Cherezov, V., GPCR Network (GPCR)
PDB entry 5k2c: 1.9 angstrom A2a adenosine receptor structure with sulfur SAD phasing and phase extension using XFEL data
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens, Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-05-18
Authors: Batyuk, A., Galli, L., Ishchenko, A., Han, G.W., Gati, C., Popov, P., Lee, M.-Y., Stauch, B., White, T.A., Barty, A., Aquila, A., Hunter, M.S., Liang, M., Boutet, S., Pu, M., Liu, Z.-J., Nelson, G., James, D., Li, C., Zhao, Y., Spence, J.C.H., Liu, W., Fromme, P., Katritch, V., Weierstall, U., Stevens, R.C., Cherezov, V., GPCR Network (GPCR)
PDB entry 5k2d: 1.9A angstrom A2a adenosine receptor structure with MR phasing using XFEL data
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens, Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-05-18
Authors: Batyuk, A., Galli, L., Ishchenko, A., Han, G.W., Gati, C., Popov, P., Lee, M.-Y., Stauch, B., White, T.A., Barty, A., Aquila, A., Hunter, M.S., Liang, M., Boutet, S., Pu, M., Liu, Z.-J., Nelson, G., James, D., Li, C., Zhao, Y., Spence, J.C.H., Liu, W., Fromme, P., Katritch, V., Weierstall, U., Stevens, R.C., Cherezov, V., GPCR Network (GPCR)
PDB entry 5k2e: Structure of NNQQNY from yeast prion Sup35 with zinc acetate determined by MicroED
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1 Å
Deposited: 2016-05-18
Authors: Rodriguez, J.A., Sawaya, M.R., Cascio, D., Eisenberg, D.S.
PDB entry 5k2f: Structure of NNQQNY from yeast prion Sup35 with cadmium acetate determined by MicroED
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1 Å
Deposited: 2016-05-18
Authors: Rodriguez, J.A., Sawaya, M.R., Cascio, D., Eisenberg, D.S.
PDB entry 5k2g: Structure of GNNQQNY from yeast prion Sup35 in space group P21 determined by MicroED
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.1 Å
Deposited: 2016-05-18
Authors: Rodriguez, J.A., Sawaya, M.R., Cascio, D., Eisenberg, D.S.
PDB entry 5k2h: Structure of GNNQQNY from yeast prion Sup35 in space group P212121 determined by MicroED
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 1.05 Å
Deposited: 2016-05-18
Authors: Rodriguez, J.A., Sawaya, M.R., Cascio, D., Eisenberg, D.S.
PDB entry 5k2i: Crystal structure of Oxidized Prx3 from Vibrio vulnificus
Classification: OXIDOREDUCTASE
Source organism: Vibrio vulnificus MO6-24/O
Experimental method: X-RAY DIFFRACTION
Resolution: 1.481 Å
Deposited: 2016-05-19
Authors: Ahn, J., Ha, N.-C.
PDB entry 5k2j: Crystal structure of reduced Prx3 in complex with h2o2 from Vibrio vulnificus
Classification: OXIDOREDUCTASE
Source organism: Vibrio vulnificus MO6-24/O
Experimental method: X-RAY DIFFRACTION
Resolution: 1.908 Å
Deposited: 2016-05-19
Authors: Ahn, J., Ha, N.-C.
PDB entry 5k2k: Crystal structure of lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-05-19
Authors: Ko, S., Choe, J.
PDB entry 5k2l: Crystal structure of LysM domain from Volvox carteri chitinase
Classification: HYDROLASE
Source organism: Volvox carteri f. nagariensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2016-05-19
Authors: Kitaoku, Y., Numata, T., Fukamizo, T., Ohnuma, T.
PDB entry 5k2m: Bifunctional LysX/ArgX from Thermococcus kodakarensis with LysW-gamma-AAA
Classification: BIOSYNTHETIC PROTEIN
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2016-05-19
Authors: Yoshida, A., Tomita, T., Nishiyama, M.
PDB entry 5k2n: lysozyme with nano particles
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2016-05-19
Authors: Ko, S., Choe, J.
PDB entry 5k2o: Crystal structure of Arabidopsis thaliana acetohydroxyacid synthase in complex with a pyrimidinyl-benzoate herbicide, pyrithiobac
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.873 Å
Deposited: 2016-05-19
Authors: Garcia, M.D., Lonhienne, T., Guddat, L.W.
PDB entry 5k2p: Crystal structure of lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2016-05-19
Authors: Ko, S., Choe, J.
PDB entry 5k2q: Lysozyme with nano particles
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2016-05-19
Authors: Ko, S., Choe, J.
PDB entry 5k2r: Crystal structure of lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-05-19
Authors: Ko, S., Choe, J.
PDB entry 5k2s: Lysozyme with nano particles
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-05-19
Authors: Ko, S., Choe, J.
PDB entry 5k2x: Crystal structure of M. tuberculosis UspC (tetragonal crystal form)
Classification: TRANSPORT PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-05-19
Authors: Futterer, K., Fullam, E., Besra, G.S.
PDB entry 5k2y: Crystal structure of M. tuberculosis UspC (monoclinic crystal form)
Classification: TRANSPORT PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2016-05-19
Authors: Futterer, K., Fullam, E., Besra, G.S.
PDB entry 5k2z: PDX1.3-adduct (Arabidopsis)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-05-19
Authors: Robinson, G.C., Kaufmann, M., Roux, C., Fitzpatrick, T.B.
PDB entry 5k30: Crystal structure of methionine gamma-lyase from Citrobacter freundii modified by S-Ethyl-L-cysteine sulfoxide
Classification: LYASE
Source organism: Citrobacter freundii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2016-05-19
Authors: Revtovich, S.V., Nikulin, A.D., Morozova, E.A., Demidkina, T.V.
PDB entry 5k31: Crystal structure of Human fibrillar procollagen type I C-propeptide Homo-trimer
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-05-19
Authors: Sharma, U., Hulmes, D.J.S., Aghajari, N.
PDB entry 5k32: PDE4D crystal structure in complex with small molecule inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2016-05-19
Authors: Segarra, V., Hernandez, B., Roberts, R., Gracia, J., Soler, M., Bonin, I., Aymami, J.
PDB entry 5k33: Crystal structure of extracellular domain of HER2 in complex with Fcab STAB19
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2016-05-19
Authors: Humm, A., Lobner, E., Goritzer, K., Mlynek, G., Obinger, C., Djinovic-Carugo, K.
PDB entry 5k34: Structure of the ankyrin domain of AnkB from Legionella Pneumophila
Classification: PROTEIN BINDING
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2016-05-19
Authors: Wong, K., Kozlov, G., Gehring, K., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
PDB entry 5k35: Structure of the Legionella effector, AnkB, in complex with human Skp1
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2016-05-19
Authors: Wong, K., Kozlov, G., Gehring, K., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
PDB entry 5k36: Structure of an eleven component nuclear RNA exosome complex bound to RNA
Classification: Hydrolase/RNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2016-05-19
Authors: Lima, C.D., Zinder, J.C.
PDB entry 5k38: Crystal structure of Retinoic acid receptor-related orphan receptor (ROR) gamma ligand binding domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2016-05-19
Authors: Lu, J., Rastinejad, F.
PDB entry 5k39: THE TYPE II COHESIN DOCKERIN COMPLEX FROM CLOSTRIDIUM THERMOCELLUM
Classification: STRUCTURAL PROTEIN
Source organism: Clostridium thermocellum 27405; Ruminiclostridium thermocellum 27405
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2016-05-19
Authors: Viegas, A., Pinheiro, B., Bras, J.L.A., Romao, M.J., Alves, V., Carvalho, A.L., Fontes, C.M.G.A.
PDB entry 5k3a: Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - His280Asn/Fluoroacetate - Cocrystallized - Both Protomers Reacted with Ligand
Classification: HYDROLASE
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.511 Å
Deposited: 2016-05-19
Authors: Mehrabi, P., Kim, T.H., Prosser, S.R., Pai, E.F.
PDB entry 5k3b: Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Chloroacetate - Cocrystallized
Classification: HYDROLASE
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2016-05-19
Authors: Mehrabi, P., Kim, T.H., Prosser, S.R., Pai, E.F.
PDB entry 5k3c: Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - WT/5-Fluorotryptophan
Classification: HYDROLASE
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.541 Å
Deposited: 2016-05-19
Authors: Mehrabi, P., Kim, T.H., Prosser, S.R., Pai, E.F.
PDB entry 5k3d: Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - WT/Apo - No Halide
Classification: HYDROLASE
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-05-19
Authors: Mehrabi, P., Kim, T.H., Prosser, S.R., Pai, E.F.
PDB entry 5k3e: Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Glycolate - Cocrystallized
Classification: HYDROLASE
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2016-05-19
Authors: Mehrabi, P., Kim, T.H., Prosser, S.R., Pai, E.F.
PDB entry 5k3f: Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - His280Asn/Fluoroacetate - Cocrystallized - Single Protomer Reacted with Ligand
Classification: HYDROLASE
Source organism: Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2016-05-19
Authors: Mehrabi, P., Kim, T.H., Prosser, S.R., Pai, E.F.
PDB entry 5k3g: Crystals structure of Acyl-CoA oxidase-1 in Caenorhabditis elegans, Apo form-I
Classification: OXIDOREDUCTASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.859 Å
Deposited: 2016-05-19
Authors: Zhang, X., Li, K., Jones, R.A., Bruner, S.D., Butcher, R.A.
PDB entry 5k3h: Crystals structure of Acyl-CoA oxidase-1 in Caenorhabditis elegans, Apo form-II
Classification: OXIDOREDUCTASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2016-05-19
Authors: Zhang, X., Li, K., Jones, R.A., Bruner, S.D., Butcher, R.A.
PDB entry 5k3i: Crystal structure of Acyl-CoA oxidase-1 in Caenorhabditis elegans complexed with FAD and ATP
Classification: OXIDOREDUCTASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.683 Å
Deposited: 2016-05-19
Authors: Zhang, X., Li, K., Jones, R.A., Bruner, S.D., Butcher, R.A.
PDB entry 5k3j: Crystals structure of Acyl-CoA oxidase-2 in Caenorhabditis elegans bound with FAD, ascaroside-CoA, and ATP
Classification: OXIDOREDUCTASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2016-05-19
Authors: Zhang, X., Li, K., Jones, R.A., Bruner, S.D., Butcher, R.A.
PDB entry 5k3k: Crystal structure of laccase from Thermus thermophilus HB27 (CuSO4, 20 min)
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.644 Å
Deposited: 2016-05-19
Authors: Diaz-Vilchis, A., Ruiz-Arellano, R.R., Rosas-Benitez, E., Rudino-Pinera, E.
PDB entry 5k3l: Crystal structure of Retinoic acid receptor-related orphan receptor (ROR) gamma ligand binding domain complex with 444
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2016-05-19
Authors: Huang, P., Rastinejad, F.
PDB entry 5k3m: Crystal structure of Retinoic acid receptor-related orphan receptor (ROR) gamma ligand binding domain complex with UUA
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.894 Å
Deposited: 2016-05-19
Authors: Huang, P., Rastinejad, F.
PDB entry 5k3n: Crystal structure of Retinoic acid receptor-related orphan receptor (ROR) gamma ligand binding domain complex with ML209
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.666 Å
Deposited: 2016-05-19
Authors: Huang, P., Rastinejad, F., Lu, J.
PDB entry 5k3o: Wolinella succinogenes L-asparaginase P121 and L-Aspartic acid
Classification: HYDROLASE
Source organism: Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.696 Å
Deposited: 2016-05-19
Authors: Nguyen, H.A., Lave, A.
PDB entry 5k3q: Rhesus macaques Trim5alpha Bbox2 domain
Classification: LIGASE
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-05-19
Authors: Keown, J.K., Goldstone, D.C.
PDB entry 5k3s: Crystal structure of Arabidopsis thaliana acetohydroxyacid synthase in complex with a pyrimidinyl-benzoate herbicide, bispyribac-sodium
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.873 Å
Deposited: 2016-05-19
Authors: Garcia, M.D., Lonhienne, T., Guddat, L.W.
PDB entry 5k3v: apo-PDX1.3 (Arabidopsis)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-05-20
Authors: Robinson, G.C., Kaufmann, M., Roux, C., Fitzpatrick, T.B.
PDB entry 5k3w: Structural characterisation of fold IV-transaminase, CpuTA1, from Curtobacterium pusillum
Classification: TRANSFERASE
Source organism: Curtobacterium pusillum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.503 Å
Deposited: 2016-05-20
Authors: Pavkov-Keller, T., Diepold, M., Steiner, K., Gruber, K.
PDB entry 5k3x: Crystal Structure of the sulfite dehydrogenase, SorT R78K mutant from Sinorhizobium meliloti
Classification: OXIDOREDUCTASE
Source organism: Rhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-05-20
Authors: Lee, M., McGrath, A., Maher, M.
PDB entry 5k3y: Crystal structure of AuroraB/INCENP in complex with BI 811283
Classification: TRANSFERASE
Source organism: Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-05-20
Authors: Bader, G., Zahn, S.K., Zoephel, A.
PDB entry 5k41: Structure of Mycobacterium thermoresistibile trehalose-6-phosphate synthase in a complex with ADP-glucose.
Classification: TRANSFERASE
Source organism: Mycobacterium thermoresistibile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.971 Å
Deposited: 2016-05-20
Authors: Mendes, V., Verma, N., Blaszczyk, M., Blundell, T.L.
PDB entry 5k42: Structure of Mycobacterium thermoresistibile trehalose-6-phosphate synthase in a complex with GDP-glucose.
Classification: TRANSFERASE
Source organism: Mycobacterium thermoresistibile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.921 Å
Deposited: 2016-05-20
Authors: Mendes, V., Verma, N., Blaszczyk, M., Blundell, T.L.
PDB entry 5k44: Structure of Mycobacterium thermoresistibile trehalose-6-phosphate synthase in a complex with Trehalose-6-phosphate.
Classification: TRANSFERASE
Source organism: Mycobacterium thermoresistibile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.925 Å
Deposited: 2016-05-20
Authors: Mendes, V., Verma, N., Blaszczyk, M., Blundell, T.L.
PDB entry 5k45: Wolinella succinogenes L-asparaginase P121 + L-Glutamic acid
Classification: HYDROLASE
Source organism: Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2016-05-20
Authors: Nguyen, H.A., Lave, A.
PDB entry 5k47: CryoEM structure of the human Polycystin-2/PKD2 TRP channel
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.22 Å
Deposited: 2016-05-20
Authors: Pike, A.C.W., Grieben, M., Shintre, C.A., Tessitore, A., Shrestha, L., Mukhopadhyay, S., Mahajan, P., Chalk, R., Burgess-Brown, N.A., Huiskonen, J.T., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Carpenter, E.P., Structural Genomics Consortium (SGC)
PDB entry 5k48: VIM-2 Metallo Beta Lactamase in complex with 3-(mercaptomethyl)-[1,1'-biphenyl]-4-carboxylic acid
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.744 Å
Deposited: 2016-05-20
Authors: Zollman, D., McDonough, M., Brem, J., Schofield, C.
PDB entry 5k4a: Structure of the amidase mutant E79A at 2.3 Angstrom resolution
Classification: LYASE
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-05-20
Authors: Chowdhury, S.R., Sen, U.
PDB entry 5k4b: Structure of eukaryotic translation initiation factor 3 subunit D (eIF3d) cap binding domain from Nasonia vitripennis, Crystal form 1
Classification: TRANSLATION
Source organism: Nasonia vitripennis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.399 Å
Deposited: 2016-05-20
Authors: Kranzusch, P.J., Lee, A.S.Y., Doudna, J.A., Cate, J.H.D.
PDB entry 5k4c: Structure of eukaryotic translation initiation factor 3 subunit D (eIF3d) cap binding domain from Nasonia vitripennis, Crystal form 2
Classification: TRANSLATION
Source organism: Nasonia vitripennis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2016-05-20
Authors: Kranzusch, P.J., Lee, A.S.Y., Doudna, J.A., Cate, J.H.D.
PDB entry 5k4d: Structure of eukaryotic translation initiation factor 3 subunit D (eIF3d) cap binding domain from Nasonia vitripennis, Crystal form 3
Classification: TRANSLATION
Source organism: Nasonia vitripennis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-05-20
Authors: Kranzusch, P.J., Lee, A.S.Y., Doudna, J.A., Cate, J.H.D.
PDB entry 5k4f: CAL PDZ mutant C319A with a peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2016-05-20
Authors: Zhao, Y., Madden, D.R.
PDB entry 5k4g: Wolinella succinogenes L-asparaginase S121 + L-aspartic acid, open conformation
Classification: HYDROLASE
Source organism: Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-05-20
Authors: Nguyen, H.A., Lave, A.
PDB entry 5k4h: Wolinella succinogenes L-asparaginase S121 + L-Glutamic acid
Classification: HYDROLASE
Source organism: Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-05-20
Authors: Nguyen, H.A., Lave, A.
PDB entry 5k4i: Crystal Structure of ERK2 in complex with compound 22
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2016-05-20
Authors: Yin, J., Wang, W.
PDB entry 5k4j: Crystal Structure of CDK2 in complex with compound 22
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-05-20
Authors: Yin, J., Wang, W.
PDB entry 5k4l: Crystal structure of KDM5A in complex with a naphthyridone inhibitor
Classification: Oxidoreductase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.179 Å
Deposited: 2016-05-20
Authors: Kiefer, J.R., Vinogradova, M.V.
PDB entry 5k4m: Directed evolutionary changes in MBL super family - NDM-1 Round 10 crystal-3
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2016-05-20
Authors: Hong, N.-S., Jackson, C.J., Carr, P.D.
PDB entry 5k4p: Catalytic Domain of MCR-1 phosphoethanolamine transferase
Classification: TRANSFERASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.318 Å
Deposited: 2016-05-21
Authors: Stojanoski, V., Palzkill, T., Prasad, B.V.V., Sankaran, B.
PDB entry 5k4q: Three-dimensional structure of L-threonine 3-dehydrogenase from Trypanosoma brucei bound to NAD+ refined to 2.3 angstroms
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-05-21
Authors: Adjogatse, E.K., Cooper, J.B., Erskine, P.T.
PDB entry 5k4t: Three-dimensional structure of L-threonine 3-dehydrogenase from Trypanosoma brucei refined to 2.1 angstroms
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-05-22
Authors: Adjogatse, E.K., Cooper, J.B., Erskine, P.T.
PDB entry 5k4u: Three-dimensional structure of L-threonine 3-dehydrogenase from Trypanosoma brucei showing different active site loop conformations between dimer subunits, refined to 1.9 angstroms
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-05-22
Authors: Adjogatse, E.K., Cooper, J.B., Erskine, P.T.
PDB entry 5k4v: Three-dimensional structure of L-threonine 3-dehydrogenase from Trypanosoma brucei bound to NAD+ refined to 2.2 angstroms
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-05-22
Authors: Adjogatse, E.A., Erskine, P.T., Cooper, J.B.
PDB entry 5k4w: Three-dimensional structure of L-threonine 3-dehydrogenase from Trypanosoma brucei bound to NADH and L-threonine refined to 1.72 angstroms
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2016-05-22
Authors: Adjogatse, E.A., Erskine, P.T., Cooper, J.B.
PDB entry 5k4x: M. thermoresistible IMPDH in complex with IMP and Compound 1
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium thermoresistibile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2016-05-22
Authors: Pacitto, A., Ascher, D.B., Blundell, T.L.
PDB entry 5k4y: Three-dimensional structure of L-threonine 3-dehydrogenase from Trypanosoma brucei refined to 1.77 angstroms
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2016-05-22
Authors: Adjogatse, E.A., Erskine, P.T., Cooper, J.B.
PDB entry 5k4z: M. thermoresistible IMPDH in complex with IMP and Compound 6
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium thermoresistibile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2016-05-22
Authors: Pacitto, A., Ascher, D.B., Blundell, T.L.
PDB entry 5k50: Three-dimensional structure of L-threonine 3-dehydrogenase from Trypanosoma brucei bound to NAD+ and L-allo-threonine refined to 2.23 angstroms
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2016-05-22
Authors: Adjogatse, E.A., Erskine, P.T., Cooper, J.B.
PDB entry 5k51: Trypanosome brucei Hypoxanthine-guanine phosphoribosyltranferase in complex with a 9-[5-(phosphonoheptyl]hypoxanthine
Classification: TRANSFERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.956 Å
Deposited: 2016-05-22
Authors: Teran, D., Guddat, L.
PDB entry 5k52: Crystal structures of aldehyde deformylating oxygenase from Limnothrix sp. KNUA012
Classification: METAL BINDING PROTEIN
Source organism: Limnothrix sp. KNUA012
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-05-23
Authors: Park, A.K., Kim, H-.W.
PDB entry 5k53: Crystal structures of aldehyde deformylating oxygenase from Oscillatoria sp. KNUA011
Classification: METAL BINDING PROTEIN
Source organism: Oscillatoria sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-05-23
Authors: Park, A.K., Kim, H-.W.
PDB entry 5k54: Human muscle fructose-1,6-bisphosphatase E69Q mutant in active R-state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.717 Å
Deposited: 2016-05-23
Authors: Barciszewski, J., Wisniewski, J., Kolodziejczyk, R., Dzugaj, A., Jaskolski, M., Rakus, D.
PDB entry 5k55: Human muscle fructose-1,6-bisphosphatase E69Q mutant in active R-state in complex with fructose-6-phosphate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.977 Å
Deposited: 2016-05-23
Authors: Barciszewski, J., Wisniewski, J., Kolodziejczyk, R., Dzugaj, A., Jaskolski, M., Rakus, D.
PDB entry 5k56: Human muscle fructose-1,6-bisphosphatase in active R-state in complex with fructose-1,6-bisphosphate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2016-05-23
Authors: Barciszewski, J., Wisniewski, J., Kolodziejczyk, R., Dzugaj, A., Jaskolski, M., Rakus, D.
PDB entry 5k57: HDD domain from human Ddi2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2016-05-23
Authors: Veverka, V.
PDB entry 5k58: Structure of the K. pneumonia SlmA-DNA complex bound to the C-terminal of the cell division protein FtsZ
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli O139:H28 (strain E24377A / ETEC); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.772 Å
Deposited: 2016-05-23
Authors: Schumacher, M.
PDB entry 5k59: Crystal structure of LukGH from Staphylococcus aureus in complex with a neutralising antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus (strain USA300)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2016-05-23
Authors: Welin, M., Logan, D.T., Badarau, A., Mirkina, I., Zauner, G., Dolezilkova, I., Nagy, E.
PDB entry 5k5a: Structure of the pNOB8-like ParB N-domain
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.825 Å
Deposited: 2016-05-23
Authors: Schumacher, M.
PDB entry 5k5b: Wild-type PAS-GAF fragment from Deinococcus radiodurans BphP
Classification: TRANSFERASE
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2016-05-23
Authors: Takala, H., Edlund, P., Claesson, E., Ihalainen, J.A., Westenhoff, S.
PDB entry 5k5c: Structure of Mycobacterium thermoresistibile trehalose-6-phosphate synthase in a complex with Trehalose.
Classification: TRANSFERASE
Source organism: Mycobacterium thermoresistibile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.848 Å
Deposited: 2016-05-23
Authors: Mendes, V., Verma, N., Blaszczyk, M., Blundell, T.L.
PDB entry 5k5d: Structure of the C2221 form of Pnob8-like ParB-N domain
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2016-05-23
Authors: Schumacher, M.
PDB entry 5k5e: Discovery and Structure-Activity Relationships of a Highly Selective Butyrylcholinesterase Inhibitor by Structure-Based Virtual Screening
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-05-23
Authors: De la Mora, E., Dighe, S.N., Deora, G.S., Ross, B.P., Nachon, F., Brazzolotto, X.
PDB entry 5k5f: NMR structure of the HLTF HIRAN domain
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2016-05-23
Authors: Bezsonova, I., Neculai, D., Korzhnev, D., Weigelt, J., Bountra, C., Edwards, A., Arrowsmith, C., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 5k5g: Structure of human islet amyloid polypeptide in complex with an engineered binding protein
Classification: HORMONE
Source organism: Homo sapiens; synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2016-05-23
Authors: Mirecka, E.A., Feuerstein, S., Gremer, L., Schroeder, G.F., Stoldt, M., Willbold, D., Hoyer, W.
PDB entry 5k5h: Homo sapiens CCCTC-binding factor (CTCF) ZnF4-7 and DNA complex structure
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.108 Å
Deposited: 2016-05-23
Authors: Hashimoto, H., Cheng, X.
PDB entry 5k5i: Homo sapiens CCCTC-binding factor (CTCF) ZnF5-8 and DNA complex structure in space group P65
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2016-05-23
Authors: Hashimoto, H., Cheng, X.
PDB entry 5k5j: Homo sapiens CCCTC-binding factor (CTCF) ZnF5-8 and DNA complex structure in space group P41212
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.287 Å
Deposited: 2016-05-23
Authors: Hashimoto, H., Cheng, X.
PDB entry 5k5k: Crystal structure of laccasse from Thermus thermophilus HB27 (ascorbic acid 10 min)
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.796 Å
Deposited: 2016-05-23
Authors: Diaz-Vilchis, A., Ruiz-Arellano, R.R., Rosas-Benitez, E., Rudino-Pinera, E.
PDB entry 5k5l: Homo sapiens CCCTC-binding factor (CTCF) ZnF6-8 and H19 sequence DNA complex structure
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.125 Å
Deposited: 2016-05-23
Authors: Hashimoto, H., Cheng, X.