LiteFold/PDB huggingface dataset:
PDB entry 8zfd: Cryo-EM structure of the mmGPR4-Gs receptor in pH7.6
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2024-05-07
Authors: Wen, X., Rong, N.K., Yang, F., Sun, J.P.
PDB entry 8zfe: Cryo-EM structure of the mmGPR4-Gs receptor in pH7.2
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2024-05-07
Authors: Wen, X., Rong, N.K., Yang, F., Sun, J.P.
PDB entry 8zff: Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications
Classification: RIBOSOME
Source organism: Escherichia coli BW25113; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-05-07
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Ito, T., Suzuki, T.
PDB entry 8zfg: Structure of the Bacterial Ribosome with hypoxia-induced rRNA modifications
Classification: RIBOSOME
Source organism: Escherichia coli BW25113; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-05-07
Authors: Ishiguro, K., Yokoyama, T., Shirouzu, M., Ito, T., Suzuki, T.
PDB entry 8zfh: Structure of the C-terminal domain of nsp4 from PDCOV
Classification: VIRAL PROTEIN
Source organism: Porcine deltacoronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2024-05-07
Authors: Zhang, Z.T., Liang, R., Zhang, J.T., Zhang, D., Shi, Y.J., Peng, G.Q.
PDB entry 8zfi: Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-05-07
Authors: Sriramoju, M.K., Ko, T.P., Draczkowski, P., Hsu, S.T.D.
PDB entry 8zfk: Caenorhabditis elegans ACR-23 in betaine and monepantel bound state
Classification: TRANSPORT PROTEIN
Source organism: Caenorhabditis elegans; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-05-08
Authors: Chen, Q.F., Liu, F.L., Li, T.Y., Gong, H.H., Guo, F., Liu, S.
PDB entry 8zfl: Caenorhabditis elegans ACR-23 in apo state
Classification: TRANSPORT PROTEIN
Source organism: Caenorhabditis elegans; Shimwellia blattae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-05-08
Authors: Chen, Q.F., Liu, F.L., Li, T.Y., Gong, H.H., Guo, F., Liu, S.
PDB entry 8zfm: Caenorhabditis elegans ACR-23 in betaine bound state
Classification: TRANSPORT PROTEIN
Source organism: Caenorhabditis elegans; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-05-08
Authors: Chen, Q.F., Liu, F.L., Li, T.Y., Gong, H.H., Guo, F., Liu, S.
PDB entry 8zfn: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and BVT.13
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-05-08
Authors: Shang, J., Kojetin, D.J.
PDB entry 8zfo: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and nTZDpa
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2024-05-08
Authors: Shang, J., Kojetin, D.J.
PDB entry 8zfp: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with GW9662 and MRL24
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-05-08
Authors: Shang, J., Kojetin, D.J.
PDB entry 8zfq: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with T0070907 and BVT.13
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2024-05-08
Authors: Shang, J., Kojetin, D.J.
PDB entry 8zfr: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with T0070907 and nTZDpa
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2024-05-08
Authors: Shang, J., Kojetin, D.J.
PDB entry 8zfs: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with T0070907 and MRL24
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2024-05-08
Authors: Shang, J., Kojetin, D.J.
PDB entry 8zft: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with T0070907 and SR1664
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-05-08
Authors: Shang, J., Kojetin, D.J.
PDB entry 8zfv: Crystal Structure of C-terminal domain of nucleocapsid protein from SARS-CoV-2 in complex with ceftriaxone
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-05-08
Authors: Dhaka, P., Mahto, J.K., Tomar, S., Kumar, P.
PDB entry 8zfw: norbelladine 4'-O-methyltransferase S52T Y186F complexed with Mg and SAH
Classification: TRANSFERASE
Source organism: Narcissus pseudonarcissus MK-2014
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2024-05-08
Authors: Saw, Y.Y.H., Nakashima, Y., Morita, H.
PDB entry 8zfz: cryo-EM structure of Gs-coupled zebrafish GPR4 at pH 6.5
Classification: SIGNALING PROTEIN
Source organism: Danio rerio; Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-08
Authors: Ma, Y., Tang, M., Ru, H., Song, G.
PDB entry 8zg0: Drimenyl diphosphate synthase SsDMS_F248A&D303E from Streptomyces showdoensis (Apo)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces showdoensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-05-08
Authors: Pan, X.M., Dong, S.M., Dong, L.B.
PDB entry 8zg1: Drimenyl diphosphate synthase SsDMS_F248Y&D303E from Streptomyces showdoensis (Apo)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces showdoensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-05-08
Authors: Pan, X.M., Dong, S.M., Dong, L.B.
PDB entry 8zg2: Human Keratin 19 head domain segment Y6-G16 in solution
Classification: CYTOSOLIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-05-08
Authors: Ji, Y., Jeong, M., Kim, J., Lee, C.H.
PDB entry 8zg3: Human Keratin 19 head domain segment L18-G28 in solution
Classification: CYTOSOLIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-05-08
Authors: Ji, Y., Jeong, M., Kim, J., Lee, C.H.
PDB entry 8zg4: Human Keratin 19 head domain S10E phosphomimetic mutant segment Y6-G16 in solution
Classification: CYTOSOLIC PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2024-05-08
Authors: Ji, Y., Jeong, M., Kim, J., Lee, C.H.
PDB entry 8zg5: Drimenyl diphosphate synthase SsDMS_Y505I&D303A from Streptomyces showdoensis (Apo)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces showdoensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-05-09
Authors: Pan, X.M., Dong, S.M., Dong, L.B.
PDB entry 8zg8: ZZ-domain of the Arabidopsis thaliana E3 ubiquitin-protein ligase PRT1
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.744 Å
Deposited: 2024-05-09
Authors: Yang, W.S., Song, H.K.
PDB entry 8zg9: Y-degron fused ZZ-domain of the Arabidopsis thaliana E3 ubiquitin-protein ligase PRT1
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.673 Å
Deposited: 2024-05-09
Authors: Yang, W.S., Song, H.K.
PDB entry 8zga: F-degron fused ZZ-domain of the Arabidopsis thaliana E3 ubiquitin-protein ligase PRT1
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-09
Authors: Yang, W.S., Song, H.K.
PDB entry 8zgb: W-degron fused ZZ-domain of the Arabidopsis thaliana E3 ubiquitin-protein ligase PRT1
Classification: LIGASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.785 Å
Deposited: 2024-05-09
Authors: Yang, W.S., Song, H.K.
PDB entry 8zgc: Human lysine O-link glycosylation complex, LH3/ColGalT1 with bound UDP-galactose
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2024-05-09
Authors: Peng, J., Li, W., Yao, D., Xia, Y., Wang, Q., Cai, Y., Li, S., Cao, M., Shen, Y., Ma, P., Liao, R., Qin, A., Cao, Y.
PDB entry 8zgd: The Crystal Structure of the NLRP1_LRR domain from Biortus.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-05-09
Authors: Wang, F., Cheng, W., Yuan, Z., Qi, J., Pan, W.
PDB entry 8zge: Human lysine O-link glycosylation complex, LH3/ColGalT1 tetramer with bound UDP-galactose
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-05-09
Authors: Peng, J., Li, W., Yao, D., Xia, Y., Wang, Q., Cai, Y., Li, S., Cao, M., Shen, Y., Ma, P., Liao, R., Qin, A., Cao, Y.
PDB entry 8zgg: Human lysine O-link glycosylation complex, LH3/ColGalT1 with bound UDP-glucose
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2024-05-09
Authors: Peng, J., Li, W., Yao, D., Xia, Y., Wang, Q., Cai, Y., Li, S., Cao, M., Shen, Y., Ma, P., Liao, R., Qin, A., Cao, Y.
PDB entry 8zgh: Human lysine O-link glycosylation complex, LH3/ColGalT1 in its apo state
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2024-05-09
Authors: Peng, J., Li, W., Yao, D., Xia, Y., Wang, Q., Cai, Y., Li, S., Cao, M., Shen, Y., Ma, P., Liao, R., Qin, A., Cao, Y.
PDB entry 8zgi: Crystal structure of DUF4297 from E.Coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-05-09
Authors: Chen, Q., Yu, Y.
PDB entry 8zgo: CryoEM structure of monomeric quinol dependent nitric oxide reductase from Neisseria meningitidis
Classification: OXIDOREDUCTASE
Source organism: Neisseria meningitidis alpha14
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.25 Å
Deposited: 2024-05-09
Authors: Gopalasingam, C.C., Shiro, Y., Tosha, T.
PDB entry 8zgp: CryoEM structure of dimeric quinol dependent nitric oxide reductase from Neisseria meningitidis
Classification: OXIDOREDUCTASE
Source organism: Neisseria meningitidis alpha14
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.89 Å
Deposited: 2024-05-09
Authors: Gopalasingam, C.C., Shiro, Y., Tosha, T.
PDB entry 8zgr: 80S ribosome with A/A tRNA and mRNA of WNV
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-05-09
Authors: Wu, M., Yuan, S.
PDB entry 8zgs: Structure of the ige-fc bound to its high affinity receptor fc(epsilon)ri state2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-05-09
Authors: Du, S., Deng, M.J., Xiao, J.Y.
PDB entry 8zgt: Structure of the ige-fc bound to its high affinity receptor fc(epsilon)ri state3
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-05-09
Authors: Du, S., Deng, M.J., Xiao, J.Y.
PDB entry 8zgu: Crystal structural of HTNV Gn and AH100 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Orthohantavirus hantanense
Experimental method: X-RAY DIFFRACTION
Resolution: 3.51 Å
Deposited: 2024-05-09
Authors: Wang, F.R., Wu, Y., Gao, F.
PDB entry 8zgv: Drimenyl diphosphate synthase SsDMS_F248A&D303E from Streptomyces showdoensis in complex with farnesyl diphosphate (FPP) and Mg2+
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces showdoensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-09
Authors: Pan, X.M., Dong, S.M., Dong, L.B.
PDB entry 8zgw: Drimenyl diphosphate synthase SsDMS_F248Y&D303E from Streptomyces showdoensis in complex with farnesyl diphosphate (FPP) and Mg2+
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces showdoensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2024-05-09
Authors: Pan, X.M., Dong, S.M., Dong, L.B.
PDB entry 8zgy: 80S ribosome with P/E tRNA and mRNA of WNV
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C; West Nile virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-05-10
Authors: Wu, M., Yuan, S.
PDB entry 8zgz: Cryo-EM structure of inward state Anhydromuropeptide permease (AmpG)
Classification: TRANSPORT PROTEIN
Source organism: Yokenella regensburgei
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2024-05-10
Authors: Cho, H.S., Kim, U., Chang, N., Kim, H., Yoo, Y.
PDB entry 8zh3: 80S ribosome with A/P-P/E tRNA and mRNA of WNV
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C; West Nile virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-05-10
Authors: Wu, M., Yuan, S.
PDB entry 8zh4: HIV-1 integrase core domain in complex with compound 5
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2024-05-10
Authors: Furuzono, T., Orita, T., Nomura, A., Adachi, T.
PDB entry 8zh5: The Crystal Structure of the ROCK1 from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2024-05-10
Authors: Wang, F., Cheng, W., Yuan, Z., Lin, D., Wang, J.
PDB entry 8zh6: Yeast-expressed polio type 2 expanded virus-like particles
Classification: VIRAL PROTEIN
Source organism: Poliovirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-05-10
Authors: Hong, Q., Cong, Y.
PDB entry 8zh7: Crystal structure of N-terminal domain of N-methyl-D-aspartate receptor subunit NR1 in complex with patient-derived antibody
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2024-05-10
Authors: Nomura, N., Kumazaki, K., Amano, Y.
PDB entry 8zh8: Human GPR103 -Gq complex bound to QRFP26
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Homo sapiens; Lama glama; Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2024-05-10
Authors: Iwama, A., Akasaka, H., Sano, F.K., Oshima, H.S., Shihoya, W., Nureki, O.
PDB entry 8zh9: The structure of ELK1-DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-05-10
Authors: Liu, G., Sun, L.T.
PDB entry 8zha: HIV-1 integrase core domain in complex with compound 15
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-05-10
Authors: Furuzono, T., Orita, T., Nomura, A., Adachi, T.
PDB entry 8zhb: 80S ribosome with A/A P/E tRNA and mRNA of WNV
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae S288C; West Nile virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-05-10
Authors: Wu, M., Yuan, S.
PDB entry 8zhc: pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
Classification: RIBOSOME
Source organism: Homo sapiens; Saccharomyces cerevisiae S288C; West Nile virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-05-10
Authors: Wu, M., Yuan, S.
PDB entry 8zhd: SARS-CoV-2 spike trimer (6P) in complex with two R1-26 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2024-05-10
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhe: SARS-CoV-2 spike trimer (6P) in complex with three R1-26 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2024-05-10
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhf: SARS-CoV-2 spike trimer (6P) in complex with R1-26 Fab, head-to-head aggregate
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.26 Å
Deposited: 2024-05-10
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhg: SARS-CoV-2 spike trimer (6P) in complex with R1-26 Fab, focused refinement of RBD-Fab region
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2024-05-10
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhh: SARS-CoV-2 spike trimer (6P) in complex with two H18 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.55 Å
Deposited: 2024-05-10
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhi: SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.05 Å
Deposited: 2024-05-11
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhj: SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C1 symmetry)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.45 Å
Deposited: 2024-05-11
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhk: SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C3 symmetry)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2024-05-11
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhl: SARS-CoV-2 spike trimer (6P) in complex with two H18 and two R1-32 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2024-05-11
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhm: SARS-CoV-2 spike trimer (6P) in complex with three H18 and three R1-32 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2024-05-11
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhn: SARS-CoV-2 spike trimer (6P) in complex with three H18 and three R1-32 Fabs (one RBD rotated)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Enterobacteria phage T6; Homo sapiens; Severe acute respiratory syndrome coronavirus 2; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.12 Å
Deposited: 2024-05-11
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zho: SARS-CoV-2 S1 in complex with H18 and R1-32 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2024-05-11
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhp: Dimer of SARS-CoV-2 S1 in complex with H18 and R1-32 Fabs
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2024-05-11
Authors: Yan, Q., Gao, X., Liu, B., Hou, R., He, P., Li, Z., Chen, Q., Wang, J., He, J., Chen, L., Zhao, J., Xiong, X.
PDB entry 8zhq: SFTSV Gn in complex with JK-8/12 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe fever with thrombocytopenia syndrome virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.37 Å
Deposited: 2024-05-11
Authors: Shang, H., Guo, Y., Zhang, N., Liu, W., Li, H.
PDB entry 8zhr: Cryo-EM structure of the full-length pAg-bound BTN2A1-BTN3A1-BTN3A2 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-05-11
Authors: Xin, W., Huang, B., Su, Q., Zhou, Q.
PDB entry 8zhs: Structure of Mbp-Bte1 fusion protein
Classification: ANTITOXIN
Source organism: Bacteroides fragilis NCTC 9343; Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-05-11
Authors: Xu, J.H., Chen, Z., Gao, X.
PDB entry 8zht: Structure of PpiD-YfgM complex
Classification: CHAPERONE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-05-11
Authors: Xu, J.H., Chen, Z., Gao, X.
PDB entry 8zhu: Structure of 3-amino-3-carboxyltransferase in complex with 5-thioadenosine in the biosynthesis of nocardicins
Classification: TRANSFERASE
Source organism: Nocardia uniformis subsp. tsuyamanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-05-11
Authors: Gao, Y., Mori, T., Awakawa, T., Abe, I.
PDB entry 8zhv: Structure of 3-amino-3-carboxyltransferase in complex with SAH and nocardicin G in the biosynthesis of nocardicins
Classification: TRANSFERASE
Source organism: Nocardia uniformis subsp. tsuyamanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2024-05-11
Authors: Gao, Y., Mori, T., Awakawa, T., Abe, I.
PDB entry 8zhw: Structure of Mokola lyssavirus glycoprotein in post-fusion state
Classification: VIRAL PROTEIN
Source organism: Lyssavirus mokola
Experimental method: X-RAY DIFFRACTION
Resolution: 3.199 Å
Deposited: 2024-05-11
Authors: Lu, G.W., Yang, F.L., Lin, S., Yang, J., Ye, F.
PDB entry 8zhy: Magnesium substituted Terephthalate 1,2-cis-dihydrodioldehydrogenase/Decarboxylase in complex with CO2.
Classification: LYASE
Source organism: Comamonas testosteroni KF-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-05-11
Authors: Kumar, K.A., Pahwa, D., Kumar, P.
PDB entry 8zhz: Structure of Ikoma lyssavirus glycoprotein in pre-fusion state
Classification: VIRAL PROTEIN
Source organism: Ikoma lyssavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2024-05-12
Authors: Lu, G.W., Yang, F.L., Lin, S., Yang, J., Ye, F.
PDB entry 8zi0: Cryo-EM reveals transition states of the Acinetobacter baumannii F1-ATPase rotary subunits gamma and epsilon and novel compound targets - Conformation 1
Classification: HYDROLASE
Source organism: Acinetobacter baumannii AB5075
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-05-12
Authors: Le, K.C.M., Wong, C.F., Gruber, G.
PDB entry 8zi1: Cryo-EM reveals transition states of the Acinetobacter baumannii F1-ATPase rotary subunits gamma and epsilon and novel compound targets - Conformation 2
Classification: HYDROLASE
Source organism: Acinetobacter baumannii AB5075
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-05-12
Authors: Le, K.C.M., Wong, C.F., Gruber, G.
PDB entry 8zi2: Cryo-EM reveals transition states of the Acinetobacter baumannii F1-ATPase rotary subunits gamma and epsilon and novel compound targets - Conformation 3
Classification: HYDROLASE
Source organism: Acinetobacter baumannii AB5075
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2024-05-12
Authors: Le, K.C.M., Wong, C.F., Gruber, G.
PDB entry 8zi3: Cryo-EM reveals transition states of the Acinetobacter baumannii F1-ATPase rotary subunits gamma and epsilon and novel compound targets - Conformation 4
Classification: HYDROLASE
Source organism: Acinetobacter baumannii AB5075
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-05-12
Authors: Le, K.C.M., Wong, C.F., Gruber, G.
PDB entry 8zi4: Cryo-EM structure of wtEP-trypsinogen
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-05-13
Authors: Song, Q.Y., Ding, Z.Y., Huang, H.J.
PDB entry 8zi5: Crystal structure of a beta-1,4-endoglucanase from Bispora sp. MEY-1 in complex with mannotetrose
Classification: HYDROLASE
Source organism: Bispora sp. MEY-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2024-05-13
Authors: Zheng, J., Luo, H.
PDB entry 8zi6: Crystal structure of SrUGT76G4 in complex with UDP-glucose
Classification: TRANSFERASE
Source organism: Stevia rebaudiana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-13
Authors: Wang, Y., Li, T., Yin, H.
PDB entry 8zi7: Crystal structure of SrUGT76G4 in complex with Rubusoside
Classification: TRANSFERASE
Source organism: Stevia rebaudiana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-05-13
Authors: Wang, Y., Li, T., Yin, H.
PDB entry 8zi8: Terephthalate 1,2-cis-dihydrodioldehydrogenase/Decarboxylase in complex with 2,5-Dihydroxybenzoate.
Classification: LYASE
Source organism: Comamonas testosteroni KF-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-05-13
Authors: Kumar, K.A., Pahwa, D., Kumar, P.
PDB entry 8zi9: Human left ventricle actin and myosin complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2024-05-13
Authors: Li, D.N., Zhao, Q.Y., Liu, C.
PDB entry 8zia: The L-tryptophan specific decarboxylase PsiD(50-439) in complex with tryptamine
Classification: OXIDOREDUCTASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-05-13
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8zic: Structure complex of 4-hydroxytryptamine kinase PsiK complexed with Mg2+ and Tryptamine
Classification: METAL BINDING PROTEIN
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2024-05-13
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8zie: Crystal structure of the methyltransferase PsiM in its apo-form
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-05-13
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8zif: Gamma-lyase CndF in complex with pyridoxal 5'-phosphate, L-homoserine and ethyl acetoacetate
Classification: LYASE
Source organism: Penicillium citrinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2024-05-13
Authors: Gao, Y., Zhou, J.
PDB entry 8zig: Crystal structure of the methyltransferase PsiM in complex with s-adenosylmethionine (SAM)
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-05-13
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8zih: Crystal structure of the methyltransferase PsiM in complex with SAH
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2024-05-14
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8zii: Crystal structure of the methyltransferase PsiM in complex with SAH and Norbaeocystin
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-14
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8zij: The holo structure of gamma-lyase CndF
Classification: LYASE
Source organism: Penicillium citrinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2024-05-14
Authors: Gao, Y., Tang, Y., Zhou, J.
PDB entry 8zik: Crystal structure of a beta-1,4-endoglucanase from Bispora sp. MEY-1 in complex with cellotetraose
Classification: HYDROLASE
Source organism: Bispora sp. MEY-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2024-05-14
Authors: Zheng, J., Luo, H.Y., Yao, B., Tian, J.
PDB entry 8zil: Gamma-lyase CndF in complex with ethyl acetoacetate
Classification: LYASE
Source organism: Penicillium citrinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-05-14
Authors: Gao, Y., Zhou, J.
PDB entry 8zim: Crystal structure of the methyltransferase PsiM in complex with SAH and Baeocystin
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-05-14
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8zin: Terephthalate 1,2-cis-dihydrodioldehydrogenase/Decarboxylase in complex with 2,4-dihydroxybenzoate.
Classification: LYASE
Source organism: Comamonas testosteroni KF-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-05-14
Authors: Kumar, K.A., Pahwa, D., Kumar, P.
PDB entry 8zio: Crystal structure of the methyltransferase PsiM in complex with SAH and Psilocybin
Classification: TRANSFERASE
Source organism: Psilocybe cubensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-05-14
Authors: Meng, C.Y., Wen, Y., Guo, W.T., Wu, B.X.
PDB entry 8zip: Mouse left ventricle actin and myosin complex
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2024-05-14
Authors: Li, D.N., Zhao, Q.Y., Liu, C.
PDB entry 8ziq: HerA-DUF4297 complex with DNA
Classification: IMMUNE SYSTEM
Source organism: Agrobacterium tumefaciens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-05-14
Authors: Yu, Y., CHen, Q.
PDB entry 8zir: DUF4297-HerA complex
Classification: IMMUNE SYSTEM
Source organism: Agrobacterium tumefaciens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2024-05-14
Authors: Yu, Y., Chen, Q.
PDB entry 8zis: HerA Hexamer
Classification: IMMUNE SYSTEM
Source organism: Agrobacterium tumefaciens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2024-05-14
Authors: Yu, Y., Chen, Q.
PDB entry 8zit: DUF4297-HerA complex with DNA and ATPgamaS
Classification: IMMUNE SYSTEM/DNA
Source organism: Agrobacterium tumefaciens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.76 Å
Deposited: 2024-05-14
Authors: Yu, Y., Chen, Q.
PDB entry 8ziu: Mouse MYH6 R404Q left ventricle actin and myosin complex
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2024-05-14
Authors: Li, D.N., Zhao, Q.Y., Liu, C.
PDB entry 8ziv: wtEP-trypsinogen in Tryp-1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-05-14
Authors: Song, Q.Y., Ding, Z.Y., Huang, H.J.
PDB entry 8ziw: enteropeptidase with E574A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-05-14
Authors: Song, Q.Y., Ding, Z.Y., Huang, H.J.
PDB entry 8zix: RAT skeletal muscle F-actin
Classification: PROTEIN FIBRIL
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2024-05-14
Authors: Li, D.N., Zhao, Q.Y., Liu, C.
PDB entry 8ziy: trypsinogen-EP-E574A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-05-14
Authors: Song, Q.Y., Ding, Z.Y., Huang, H.J.
PDB entry 8ziz: enteropeptidase with N619A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-05-14
Authors: Song, Q.Y., Ding, Z.Y., Huang, H.J.
PDB entry 8zj0: Terephthalate 1,2-cis-dihydrodioldehydrogenase/Decarboxylase in complex with 3-Hydroxybenzoate.
Classification: LYASE
Source organism: Comamonas testosteroni KF-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-05-14
Authors: Kumar, K.A., Pahwa, D., Kumar, P.
PDB entry 8zj1: Human left ventricle F-actin
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.25 Å
Deposited: 2024-05-14
Authors: Li, D.N., Zhao, Q.Y., Liu, C.
PDB entry 8zj2: Cryo-EM structure of the RhoG/DOCK5/ELMO1/Rac1 complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.66 Å
Deposited: 2024-05-14
Authors: Kukimoto-Niino, M., Katsura, K., Ishizuka-Katsura, Y., Mishima-Tsumagari, C., Yonemochi, M., Inoue, M., Nakagawa, R., Kaushik, R., Zhang, K.Y.J., Shirouzu, M.
PDB entry 8zj3: Terephthalate 1,2-cis-dihydrodioldehydrogenase/Decarboxylase in complex with 4-Hydroxybenzoate.
Classification: LYASE
Source organism: Comamonas testosteroni KF-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-05-14
Authors: Kumar, K.A., Pahwa, D., Kumar, P.
PDB entry 8zj4: trypsinogen-EP-N619A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2024-05-14
Authors: Song, Q.Y., Ding, Z.Y., Huang, H.J.
PDB entry 8zj5: Terephthalate 1,2-cis-dihydrodioldehydrogenase/Decarboxylase in complex with 3,4-Dihydroxybenzoate.
Classification: LYASE
Source organism: Comamonas testosteroni KF-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-05-14
Authors: Kumar, K.A., Pahwa, D., Kumar, P.
PDB entry 8zj6: Acinetobacter baumannii ModA with molybdate DTT
Classification: METAL TRANSPORT
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2024-05-14
Authors: Wen, Y., Jiao, M.
PDB entry 8zj7: Terephthalate 1,2-cis-dihydrodioldehydrogenase/Decarboxylase in complex with 3,4-Dihydroxybenzoate and NAD.
Classification: LYASE
Source organism: Comamonas testosteroni KF-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-05-14
Authors: Kumar, K.A., Pahwa, D., Kumar, P.
PDB entry 8zj8: Acinetobacter baumannii ModA with molybdate H2O2
Classification: METAL TRANSPORT
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2024-05-14
Authors: Wen, Y., Jiao, M.
PDB entry 8zj9: Acinetobacter baumannii ModA with tungstate DTT
Classification: METAL TRANSPORT
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-05-14
Authors: Wen, Y., Jiao, M.
PDB entry 8zja: Acinetobacter baumannii ModA with tungstate H2O2
Classification: METAL TRANSPORT
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2024-05-14
Authors: Wen, Y., Jiao, M.
PDB entry 8zjb: Oomycete Nudix effectors display WY-Nudix conformations with mRNA decapping activity
Classification: HYDROLASE
Source organism: Phytophthora sojae strain P6497
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2024-05-14
Authors: Xing, W., Xing, W.
PDB entry 8zjc: Cryo-EM structure of Saccharomyces cerevisiae bc1 complex
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-05-14
Authors: Ye, Y., Li, Z.W., Yang, G.F.
PDB entry 8zjd: Cryo-EM structure of kisspeptin receptor bound to KP-10
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus sp.; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-05-14
Authors: Shen, S., Liu, H., Xu, H.E.
PDB entry 8zje: Cryo-EM structure of kisspeptin receptor bound to TAK-448
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus sp.; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2024-05-14
Authors: Shen, S., Liu, H., Xu, H.E.
PDB entry 8zjf: Cryo-EM structure of human integrin alpha-E beta-7
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-05-14
Authors: Akasaka, H., Nureki, O., Kise, Y.
PDB entry 8zjg: Cryo-EM structure of human CMKLR1-Gi complex bound to chemerin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-05-14
Authors: Liu, A.J., Liu, Y.Z., Ye, R.D.
PDB entry 8zji: Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 1)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.23 Å
Deposited: 2024-05-15
Authors: Kukimoto-Niino, M., Katsura, K., Ishizuka-Katsura, Y., Mishima-Tsumagari, C., Yonemochi, M., Inoue, M., Nakagawa, R., Kaushik, R., Zhang, K.Y.J., Shirouzu, M.
PDB entry 8zjj: Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 2)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.23 Å
Deposited: 2024-05-15
Authors: Kukimoto-Niino, M., Katsura, K., Ishizuka-Katsura, Y., Mishima-Tsumagari, C., Yonemochi, M., Inoue, M., Nakagawa, R., Kaushik, R., Zhang, K.Y.J., Shirouzu, M.
PDB entry 8zjk: Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 3)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.23 Å
Deposited: 2024-05-15
Authors: Kukimoto-Niino, M., Katsura, K., Ishizuka-Katsura, Y., Mishima-Tsumagari, C., Yonemochi, M., Inoue, M., Nakagawa, R., Kaushik, R., Zhang, K.Y.J., Shirouzu, M.
PDB entry 8zjl: Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 4)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.31 Å
Deposited: 2024-05-15
Authors: Kukimoto-Niino, M., Katsura, K., Ishizuka-Katsura, Y., Mishima-Tsumagari, C., Yonemochi, M., Inoue, M., Nakagawa, R., Kaushik, R., Zhang, K.Y.J., Shirouzu, M.
PDB entry 8zjm: Structure of DOCK5/ELMO1/Rac1 core (RhoG/DOCK5/ELMO1/Rac1 dataset, class 5)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.52 Å
Deposited: 2024-05-15
Authors: Kukimoto-Niino, M., Katsura, K., Ishizuka-Katsura, Y., Mishima-Tsumagari, C., Yonemochi, M., Inoue, M., Nakagawa, R., Kaushik, R., Zhang, K.Y.J., Shirouzu, M.
PDB entry 8zjr: Structure of nucleosome-bound RFX5 complex
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-05-15
Authors: Xu, K., Zhang, Y., Yin, Y., Xue, W., Han, Y., Tian, Y.
PDB entry 8zjt: Structure of free nucleosome
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-05-15
Authors: Xu, K., Zhang, Y., Yin, Y., Xue, W., Han, Y., Tian, Y.
PDB entry 8zjv: Crystal Structure of the ERK2 complexed with 5-Iodotubercidin
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-05-15
Authors: Yang, Y., Fu, L., Chen, R., Cheng, H., Sun, X.
PDB entry 8zjw: Cryo-EM structure of photosynthetic LH1' complex of Roseospirillum parvum
Classification: PHOTOSYNTHESIS
Source organism: Roseospirillum parvum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2024-05-15
Authors: Wang, G.-L., Wang, X.-P., Yu, L.-J.
PDB entry 8zjx: Cryo-EM structure of the full length pAg-bound BTN2A1-BTN3A1-BTN3A2 in complex with Vgamma9-Vdelta2 TCR (MOP genotype)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-05-15
Authors: Xin, W., Huang, B., Su, Q., Zhou, Q.
PDB entry 8zjy: Cryo-EM structure of pAg-bound BTN2A1-BTN3A1-BTN3A3 in complex with Vgamma9-Vdelta2 TCR (G115 genotype)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-05-15
Authors: Xin, W., Huang, B., Su, Q., Zhou, Q.
PDB entry 8zjz: Cryo-EM structure of the full-length pAg-bound BTN2A1-BTN3A1-BTN3A3 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-05-15
Authors: Xin, W., Huang, B., Su, Q., Zhou, Q.
PDB entry 8zk0: Cryo-EM structure of the full length pAg-bound BTN2A1-BTN3A1-BTN3A2 in complex with Vgamma9-Vdelta2 TCR (G115 genotype)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-05-15
Authors: Xin, W., Huang, B., Su, Q., Zhou, Q.
PDB entry 8zk1: Cryo-EM structure of BTN2A1-BTN3A1-BTN3A2 mutant complex (BTN3A1 H381R, BTN2A1 R477A/T510A)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-05-15
Authors: Xin, W., Huang, B., Su, Q., Zhou, Q.
PDB entry 8zk2: Cryo-EM structure of photosynthetic LH1-RC core complex of Roseospirillum parvum
Classification: PHOTOSYNTHESIS
Source organism: Roseospirillum parvum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-05-15
Authors: Wang, G.-L., Wang, X.-P., Yu, L.-J.
PDB entry 8zk3: Cryo-EM structure of pAg-bound BTN2A1-BTN3A1-BTN3A2 in complex with Vgamma9-Vdelta2 TCR (G115 genotype), another TCR focused
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-05-15
Authors: Xin, W., Huang, B., Su, Q., Zhou, Q.
PDB entry 8zk4: Local refinemnt of pAg-bound BTN2A1-BTN3A1-BTN3A3 in complex with Vgamma9-Vdelta2 TCR (G115 genotype), another TCR focused
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-05-15
Authors: Xin, W., Huang, B., Su, Q., Zhou, Q.
PDB entry 8zk6: Crystal structure of the Decarboxylase KDC4427 from Enterobacter sp. CGMCC 5087
Classification: LYASE
Source organism: Enterobacter sp. CGMCC 5087
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-05-15
Authors: Dong, S., Liu, L., Zhang, H.
PDB entry 8zk7: Crystal structure of the Decarboxylase KDC4427 mutant E468L from Enterobacter sp. CGMCC 5087
Classification: LYASE
Source organism: Enterobacter sp. CGMCC 5087
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2024-05-15
Authors: Dong, S., Liu, L., Zhang, H.
PDB entry 8zk8: Crystal structure of the Decarboxylase KDC4427 mutant E468L in complex with indole-3-pyruvic acid
Classification: LYASE
Source organism: Enterobacter sp. CGMCC 5087
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2024-05-15
Authors: Dong, S., Liu, L., Zhang, H.
PDB entry 8zk9: Crystal structure of the Decarboxylase KDC4427 mutant E468L in complex with phenylpyruvic acid
Classification: LYASE
Source organism: Enterobacter sp. CGMCC 5087
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2024-05-15
Authors: Dong, S., Liu, L., Zhang, H.
PDB entry 8zka: Crystal structure of the Decarboxylase KDC4427 in complex with phenylpyruvic acid intermediate
Classification: LYASE
Source organism: Enterobacter sp. CGMCC 5087
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-05-15
Authors: Dong, S., Liu, L., Zhang, H.
PDB entry 8zkc: iron-sulfur cluster transfer protein ApbC
Classification: CYTOSOLIC PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-05-16
Authors: Yang, J., Liu, L.
PDB entry 8zkd: The Crystal Structure of the RON from Biortus.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-05-16
Authors: Wang, F., Cheng, W., Yuan, Z., Qi, J., Pan, W.
PDB entry 8zke: Cryo-EM structure of inward-facing Anhydromuropeptide permease (AmpG) in complex with GlcNAc-1,6-anhMurNAc
Classification: MEMBRANE PROTEIN
Source organism: Yokenella regensburgei
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2024-05-16
Authors: Chang, N., Kim, U., Yoo, Y., Kim, H., Cho, H.
PDB entry 8zkh: Structure of Polycystin-1/Polycystin-2 complex with phosphatidylglycerol-bound
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-05-16
Authors: Chen, M.Y., Su, Q., Shi, Y.G.
PDB entry 8zkj: The crystal structure of apo-LDHC
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2024-05-16
Authors: Wu, C.Y., Wang, H.L.
PDB entry 8zkk: Portal-tail of Vibrio cholerae typing phage mature VP1
Classification: VIRAL PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-05-16
Authors: Liu, H.R., Pang, H.
PDB entry 8zkm: portal-tail of Vibrio cholerae typing phage release VP1
Classification: VIRAL PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2024-05-16
Authors: Liu, H.R., Pang, H.
PDB entry 8zkn: CryoEM structure of Thyroid Hormone Transporter MCT8 bound with silychristin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-05-16
Authors: Tan, J., Xiao, Y., Kong, F., Zhu, A., Qian, J., Yan, C.
PDB entry 8zko: CryoEM structure of Thyroid Hormone Transporter MCT8
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2024-05-17
Authors: Tan, J., Xiao, Y., Kong, F., Zhu, A., Qian, J., Yan, C.
PDB entry 8zkp: Cryo-EM structure of the efflux transporter MmpL5/MmpS5 from Mycobacterium tuberculosis, C3 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv; Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2024-05-17
Authors: Zhang, B., Xiong, Z., Rao, Z.
PDB entry 8zkq: Cryo-EM structure of the efflux transporter MmpL5/MmpS5 from Mycobacterium tuberculosis, C1 symmetry
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis H37Rv; Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-05-17
Authors: Zhang, B., Xiong, Z., Rao, Z.