LiteFold/PDB huggingface dataset:
PDB entry 3w73: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-129
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2013-02-27
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w74: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-139
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-02-27
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w75: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-149
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2013-02-27
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w76: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-189
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2013-02-27
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w77: Crystal Structure of azoreductase AzrA
Classification: OXIDOREDUCTASE
Source organism: Bacillus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2013-02-27
Authors: Ogata, D., Yu, J., Ooi, T., Yao, M.
PDB entry 3w78: Crystal Structure of azoreductase AzrC in complex with NAD(P)-inhibitor Cibacron Blue
Classification: OXIDOREDUCTASE/ OXIDOREDUCTASE INHIBITOR
Source organism: Bacillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2013-02-27
Authors: Yu, J., Ogata, D., Ooi, T., Yao, M.
PDB entry 3w79: Crystal Structure of azoreductase AzrC in complex with sulfone-modified azo dye Orange I
Classification: OXIDOREDUCTASE
Source organism: Bacillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-02-27
Authors: Ogata, D., Yu, J., Ooi, T., Yao, M.
PDB entry 3w7a: Crystal Structure of azoreductase AzrC fin complex with sulfone-modified azo dye Acid Red 88
Classification: OXIDOREDUCTASE
Source organism: Bacillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-02-27
Authors: Yu, J., Ogata, D., Ooi, T., Yao, M.
PDB entry 3w7b: Crystal structure of formyltetrahydrofolate deformylase from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2013-02-28
Authors: Sampei, G., Yanagida, Y., Ogata, N., Kusano, M., Terao, K., Kawai, H., Fukai, Y., Kanagawa, M., Inoue, Y., Baba, S., Kawai, G.
PDB entry 3w7c: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-077
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-02-28
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7d: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-170
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2013-02-28
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7e: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-179
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2013-02-28
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7f: Crystal structure of the C(30) carotenoid dehydrosqualene synthase from staphylococcus aureus complexed with farnesyl thiopyrophosphate
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-02-28
Authors: Liu, C.I., Jeng, W.Y., Wang, A.H., Oldfield, E.
PDB entry 3w7g: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-013
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-02-28
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7h: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-015
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2013-02-28
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7i: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-055
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2013-02-28
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7j: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-6-040
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2013-02-28
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7k: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-6-066
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2013-02-28
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7l: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-075
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2013-03-02
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7m: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-3-063
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-02
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7n: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-3-149
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2013-03-02
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7o: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-3-165
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2013-03-02
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7p: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-4-031
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-03-02
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7q: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-5-127
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2013-03-02
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7r: Structure of Human dihydroorotate dehydrogenase in complex with mii-4-097
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2013-03-06
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w7s: Escherichia coli K12 YgjK complexed with glucose
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-03-06
Authors: Miyazaki, T., Kurakata, Y., Uechi, A., Yoshida, H., Kamitori, S., Sakano, Y., Nishikawa, A., Tonozuka, T.
PDB entry 3w7t: Escherichia coli K12 YgjK complexed with mannose
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-03-06
Authors: Miyazaki, T., Kurakata, Y., Uechi, A., Yoshida, H., Kamitori, S., Sakano, Y., Nishikawa, A., Tonozuka, T.
PDB entry 3w7u: Escherichia coli K12 YgjK complexed with galactose
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2013-03-06
Authors: Miyazaki, T., Kurakata, Y., Uechi, A., Yoshida, H., Kamitori, S., Sakano, Y., Nishikawa, A., Tonozuka, T.
PDB entry 3w7v: Crystal Structure of Axe2, an Acetylxylan Esterase from Geobacillus stearothermophilus
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-03-08
Authors: Lansky, S., Alalouf, O., Solomon, H.V., Alhassid, A., Belrahli, H., Govada, L., Chayan, N.E., Shoham, Y., Shoham, G.
PDB entry 3w7w: Crystal structure of E. coli YgjK E727A complexed with 2-O-alpha-D-glucopyranosyl-alpha-D-galactopyranose
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-08
Authors: Miyazaki, T., Ichikawa, M., Yokoi, G., Kitaoka, M., Mori, H., Kitano, Y., Nishikawa, A., Tonozuka, T.
PDB entry 3w7x: Crystal structure of E. coli YgjK D324N complexed with melibiose
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-03-08
Authors: Miyazaki, T., Ichikawa, M., Yokoi, G., Kitaoka, M., Mori, H., Kitano, Y., Nishikawa, A., Tonozuka, T.
PDB entry 3w7y: 0.92A structure of 2Zn human insulin at 100K
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.92 Å
Deposited: 2013-03-11
Authors: Sakabe, N., Sakabe, K., Sasaki, K., Murayoshi, M.
PDB entry 3w7z: 1.15A structure of human 2Zn insulin at 293K
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2013-03-11
Authors: Hoshikawa, N., Sasaki, K., Sakabe, N., Sakabe, K.
PDB entry 3w80: Crystal structure of dodecamer human insulin with double C-axis length of the hexamer 2 Zn insulin cell
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-03-11
Authors: Murayoshi, M., Sasaki, K., Sakabe, N., Sakabe, K.
PDB entry 3w81: Human alpha-l-iduronidase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-03-11
Authors: Maita, N., Tsukimura, T., Taniguchi, T., Saito, S., Ohno, K., Taniguchi, H., Sakuraba, H.
PDB entry 3w82: Human alpha-L-iduronidase in complex with iduronic acid
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2013-03-11
Authors: Maita, N., Tsukimura, T., Taniguchi, T., Saito, S., Ohno, K., Taniguchi, H., Sakuraba, H.
PDB entry 3w83: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-6-097
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-03-12
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w84: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-6-101
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2013-03-12
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w85: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-3-139
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-03-12
Authors: Inaoka, D.K., Iida, M., Tabuchi, T., Lee, N., Hashimoto, S., Matsuoka, S., Kuranaga, T., Shiba, T., Sakamoto, K., Suzuki, S., Balogun, E.O., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w86: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with SH-1-96
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-03-12
Authors: Inaoka, D.K., Hashimoto, S., Rocha, J.R., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Kuranaga, T., Shiba, T., Balogun, E.O., Sakamoto, K., Suzuki, S., Montanari, C.A., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w87: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with SH-1-103
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2013-03-12
Authors: Inaoka, D.K., Hashimoto, S., Rocha, J.R., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Kuranaga, T., Shiba, T., Balogun, E.O., Sakamoto, K., Suzuki, S., Montanari, C.A., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w88: Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with SH-1-200
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2013-03-12
Authors: Inaoka, D.K., Hashimoto, S., Rocha, J.R., Iida, M., Tabuchi, T., Lee, N., Matsuoka, S., Kuranaga, T., Shiba, T., Balogun, E.O., Sakamoto, K., Suzuki, S., Montanari, C.A., Nara, T., Aoki, T., Inoue, M., Honma, T., Tanaka, A., Harada, S., Kita, K.
PDB entry 3w8d: Crystal structure of D-3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis complexed with NAD+ and an inhibitor methylmalonate
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2013-03-12
Authors: Kanazawa, H., Tsunoda, M., Hoque, M.M., Suzuki, K., Yamamoto, T., Takenaka, A.
PDB entry 3w8e: Crystal structure of D-3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis complexed with NAD+ and a substrate D-3-hydroxybutyrate
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2013-03-12
Authors: Kanazawa, H., Tsunoda, M., Hoque, M.M., Suzuki, K., Yamamoto, T., Takenaka, A.
PDB entry 3w8f: Crystal structure of D-3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis complexed with NAD+ and an inhibitor malonate
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2013-03-12
Authors: Kanazawa, H., Tsunoda, M., Hoque, M.M., Suzuki, K., Yamamoto, T., Takenaka, A.
PDB entry 3w8g: MamM V260R
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2013-03-12
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w8h: Crystal structure of CCM3 in complex with the C-terminal regulatory domain of STK25
Classification: PROTEIN BINDING/TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.426 Å
Deposited: 2013-03-13
Authors: Xu, X., Wang, D.C., Ding, J.
PDB entry 3w8i: Crystal structure of CCM3 in complex with the C-terminal regulatory domain of MST4
Classification: PROTEIN BINDING/TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-13
Authors: Xu, X., Wang, D.C., Ding, J.
PDB entry 3w8j: Crystal structure of P5 a0 in a complex with Prx4 c-term
Classification: OXIDOREDUCTASE/ISOMERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-03-13
Authors: Inaba, K., Suzuki, M., Kojima, R.
PDB entry 3w8k: Crystal structure of class C beta-lactamase Mox-1
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-03-15
Authors: Shimizu-ibuka, A., Oguri, T., Furuyama, T., Ishii, Y.
PDB entry 3w8l: Crystal structure of human CK2 in complex with inositol hexakisphosphate
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-03-15
Authors: Son, S.H., Lee, W.-K., Yu, Y.G., Lee, H.H.
PDB entry 3w8m: Crystal Structure of HasAp with Iron Salophen
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2013-03-19
Authors: Shirataki, C., Shoji, O., Sugimoto, H., Shiro, Y., Watanabe, Y.
PDB entry 3w8n: Open form structure of CMP kinase in complex with CMP from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-19
Authors: Nakagawa, N., Mega, R., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 3w8o: Crystal Structure of HasAp with Iron Phthalocyanine
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-03-20
Authors: Shirataki, C., Shoji, O., Terada, M., Sugimoto, H., Shiro, Y., Watanabe, Y.
PDB entry 3w8p: MamM-CTD D249A&H28A mutant
Classification: METAL TRANSPORT
Source organism: Magnetospirillum gryphiswaldense
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-20
Authors: Zeytuni, N., Davidov, G., Zarivach, R.
PDB entry 3w8q: Structure of the Human Mitogen-Activated Protein Kinase Kinase 1 (MEK1)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-03-20
Authors: Nakae, S., Kitamura, M., Shirai, T., Tada, T.
PDB entry 3w8r: Mutant structure of Thermus thermophilus HB8 uridine-cytidine kinase
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-03-21
Authors: Tomoike, F., Nakagawa, N., Masui, R., Kuramitsu, S.
PDB entry 3w8s: Crystal structure of monomeric Na-GST-3, a glutathione s-transferase from the major human hookworm parasite Necator americanus
Classification: TRANSFERASE
Source organism: Necator americanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2013-03-21
Authors: Asojo, O.A.
PDB entry 3w8v: Crystal Structure Analysis of the synthetic GCN4 coiled coil peptide
Classification: TRANSCRIPTION
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-03-21
Authors: Shahar, A., Zarivach, R., Ashkenasy, G.
PDB entry 3w8w: The crystal structure of EncM
Classification: OXIDOREDUCTASE
Source organism: Streptomyces maritimus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2013-03-22
Authors: Teufel, R., Miyanaga, A., Stull, F., Michaudel, Q., Louie, G., Noel, J.P., Baran, P.S., Palfey, B., Moore, B.S.
PDB entry 3w8x: The complex structure of EncM with trifluorotriketide
Classification: OXIDOREDUCTASE
Source organism: Streptomyces maritimus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2013-03-22
Authors: Teufel, R., Miyanaga, A., Stull, F., Michaudel, Q., Louie, G., Noel, J.P., Baran, P.S., Palfey, B., Moore, B.S.
PDB entry 3w8z: The complex structure of EncM with hydroxytetraketide
Classification: OXIDOREDUCTASE
Source organism: Streptomyces maritimus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-03-22
Authors: Teufel, R., Miyanaga, A., Stull, F., Michaudel, Q., Louie, G., Noel, J.P., Baran, P.S., Palfey, B., Moore, B.S.
PDB entry 3w90: Crystal structure of CMP kinase from Thermus thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-03-22
Authors: Nakagawa, N., Mega, R., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 3w91: crystal structure of SeMet-labeled yeast N-acetyltransferase Mpr1 L87M mutant
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-03-23
Authors: Nasuno, R., Hirano, Y., Itoh, T., Hakoshima, T., Hibi, T., Takagi, H.
PDB entry 3w92: Crystal Structure Analysis of the synthetic GCN4 Thioester coiled coil peptide
Classification: TRANSCRIPTION
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-03-24
Authors: Shahar, A., Zarivach, R., Ashkenasy, G.
PDB entry 3w93: Crystal Structure Analysis of the synthetic GCN4 Ester coiled coil peptide
Classification: TRANSCRIPTION
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-03-24
Authors: Shahar, A., Zarivach, R., Ashkenasy, G.
PDB entry 3w94: Structure of Oryzias latipes enteropeptidase light chain
Classification: HYDROLASE
Source organism: Oryzias latipes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2013-03-26
Authors: Hu, S., Xu, J., Wang, H., Guo, Y.J.
PDB entry 3w95: Crystal structure of 2A proteinase (C110A) from enterovirus 71
Classification: HYDROLASE
Source organism: Human enterovirus 71
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-03-27
Authors: Mu, Z., Gao, X., Cui, S.
PDB entry 3w96: Crystal Structure of Human Nucleosome Core Particle lacking H2A N-terminal region
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-04-01
Authors: Iwasaki, W., Miya, Y., Horikoshi, N., Osakabe, A., Tachiwana, H., Shibata, T., Kagawa, W., Kurumizaka, H.
PDB entry 3w97: Crystal Structure of Human Nucleosome Core Particle lacking H2B N-terminal region
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2013-04-01
Authors: Iwasaki, W., Miya, Y., Horikoshi, N., Osakabe, A., Tachiwana, H., Shibata, T., Kagawa, W., Kurumizaka, H.
PDB entry 3w98: Crystal Structure of Human Nucleosome Core Particle lacking H3.1 N-terminal region
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2013-04-01
Authors: Iwasaki, W., Miya, Y., Horikoshi, N., Osakabe, A., Tachiwana, H., Shibata, T., Kagawa, W., Kurumizaka, H.
PDB entry 3w99: Crystal Structure of Human Nucleosome Core Particle lacking H4 N-terminal region
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-04-01
Authors: Iwasaki, W., Miya, Y., Horikoshi, N., Osakabe, A., Tachiwana, H., Shibata, T., Kagawa, W., Kurumizaka, H.
PDB entry 3w9a: Crystal structure of the catalytic domain of the glycoside hydrolase family 131 protein from Coprinopsis cinerea
Classification: HYDROLASE
Source organism: Coprinopsis cinerea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2013-04-01
Authors: Miyazaki, T., Tanaka, Y., Tamura, M., Yoshida, M., Nishikawa, A., Tonozuka, T.
PDB entry 3w9b: Crystal structure of Candida antarctica lipase B with anion-tag
Classification: HYDROLASE
Source organism: Candida antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-04-02
Authors: Kim, S.K., Lee, H.H., Park, Y.C., Jeon, S.T., Son, S.H., Min, W.K., Seo, J.H.
PDB entry 3w9c: Crystal structure of the electron transfer complex of cytochrome p450cam with putidaredoxin
Classification: OXIDOREDUCTASE/ELECTRON TRANSPORT
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-04-03
Authors: Kikui, Y., Hiruma, Y., Hass, M.A., Koteishi, H., Ubbink, M., Nojiri, M.
PDB entry 3w9d: Structure of Human Monoclonal Antibody E317 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2013-04-03
Authors: Lee, C.C., Lin, L.L., Wang, A.H.J.
PDB entry 3w9e: Structure of Human Monoclonal Antibody E317 Fab Complex with HSV-2 gD
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human herpesvirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-04-03
Authors: Lee, C.C., Lin, L.L., Wang, A.H.J.
PDB entry 3w9f: Crystal structure of the ankyrin repeat domain of chicken TRPV4 in complex with IP3
Classification: TRANSPORT PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-04
Authors: Itoh, Y., Hamada-nakahara, S., Suetsugu, S.
PDB entry 3w9g: Crystal structure of the ankyrin repeat domain of chicken TRPV4
Classification: TRANSPORT PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-04
Authors: Itoh, Y., Hamada-nakahara, S., Suetsugu, S.
PDB entry 3w9h: Structural basis for the inhibition of bacterial multidrug exporters
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2013-04-04
Authors: Sakurai, K., Nagata, C., Nakashima, R., Yamaguchi, A.
PDB entry 3w9i: Structural basis for the inhibition of bacterial multidrug exporters
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2013-04-04
Authors: Sakurai, K., Nakashima, R., Hayashi, K., Yamaguchi, A.
PDB entry 3w9j: Structural basis for the inhibition of bacterial multidrug exporters
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2013-04-04
Authors: Sakurai, K., Nakashima, R., Hayashi, K., Yamaguchi, A.
PDB entry 3w9k: Crystal structure of thermoacidophile-specific protein STK_08120 complexed with myristic acid
Classification: LIPID BINDING PROTEIN
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-05
Authors: Miyakawa, T., Sawano, Y., Miyazono, K., Miyauchi, Y., Hatano, K., Tanokura, M.
PDB entry 3w9p: Crystal structure of monomeric FraC (second crystal form)
Classification: TOXIN
Source organism: Actinia fragacea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-09
Authors: Caaveiro, J.M.M., Tanaka, K., Tsumoto, K.
PDB entry 3w9r: Crystal structure of the high-affinity abscisic acid receptor PYL9/RCAR9 bound to ABA
Classification: HORMONE RECEPTOR
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-13
Authors: Nakagawa, M., Hirano, Y., Kagiyama, M., Shibata, N., Hakoshima, T.
PDB entry 3w9s: Crystal Structure Analysis of the N-terminal Receiver domain of Response Regulator PmrA
Classification: SIGNALING PROTEIN/ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-04-15
Authors: Chen, C., Luo, S.
PDB entry 3w9t: pore-forming CEL-III
Classification: TOXIN
Source organism: Cucumaria echinata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-04-16
Authors: Unno, H., Goda, S., Hatakeyama, T.
PDB entry 3w9u: Crystal structure of Lipk107
Classification: HYDROLASE
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-17
Authors: Yuan, Y.A.
PDB entry 3w9v: Crystal structure of refolded DING protein
Classification: TRANSPORT PROTEIN
Source organism: unidentified prokaryotic organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.031 Å
Deposited: 2013-04-17
Authors: Gai, Z.Q., Nakamura, A., Tanaka, Y., Hirano, N., Tanaka, I., Yao, M.
PDB entry 3w9w: Crystal structure of DING protein
Classification: TRANSPORT PROTEIN
Source organism: unidentified prokaryotic organism
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-04-17
Authors: Gai, Z.Q., Nakamura, A., Tanaka, Y., Hirano, N., Tanaka, I., Yao, M.
PDB entry 3w9y: Crystal structure of the human DLG1 guanylate kinase domain
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-18
Authors: Mori, S., Tezuka, Y., Arakawa, A., Handa, N., Shirouzu, M., Akiyama, T., Yokoyama, S.
PDB entry 3w9z: Crystal structure of DusC
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-19
Authors: Chen, M., Yu, J., Tanaka, Y., Tanaka, I., Yao, M.
PDB entry 3wa0: Crystal structure of merlin complexed with DCAF1/VprBP
Classification: CELL ADHESION
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2013-04-20
Authors: Mori, T., Gotoh, S., Shirakawa, M., Hakoshima, T.
PDB entry 3wa1: Crystal structure of BinB: A receptor binding component of the binary toxin from Lysinibacillus sphaericus
Classification: TOXIN
Source organism: Lysinibacillus sphaericus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-04-22
Authors: Srisucharitpanit, K., Yao, M., Chimnaronk, S., Promdonkoy, B., Boonserm, P., Tanaka, I.
PDB entry 3wa2: High resolution crystal structure of copper amine oxidase from arthrobacter globiformis
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2013-04-22
Authors: Murakawa, T., Hayashi, H., Sunami, T., Kurihara, K., Tamada, T., Kuroki, R., Suzuki, M., Tanizawa, K., Okajima, T.
PDB entry 3wa3: Crystal structure of copper amine oxidase from arthrobacter globiformis in N2 condition
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-04-22
Authors: Murakawa, T., Hayashi, H., Sunami, T., Kurihara, K., Tamada, T., Kuroki, R., Suzuki, M., Tanizawa, K., Okajima, T.
PDB entry 3wa4: Grb2 SH2 domain/CD28-derived peptide complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2013-04-23
Authors: Higo, K., Oda, M., Ito, N.
PDB entry 3wa5: Crystal Structure of type VI peptidoglycan muramidase effector Tse3 in complex with its cognate immunity protein Tsi3
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-26
Authors: Ding, J., Wang, T., Liu, W., Wang, D.C.
PDB entry 3wa6: Crystal structure of tannase from Lactobacillus plantarum in the orthorhombic crystal
Classification: HYDROLASE
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-27
Authors: Matoba, Y., Tanaka, N., Sugiyama, M.
PDB entry 3wa7: Crystal structure of selenomethionine-labeled tannase from Lactobacillus plantarum in the orthorhombic crystal
Classification: HYDROLASE
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-04-27
Authors: Matoba, Y., Tanaka, N., Sugiyama, M.
PDB entry 3wa8: Crystal structure of M. ruber CasB
Classification: RNA BINDING PROTEIN
Source organism: Meiothermus ruber
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-04-28
Authors: Yuan, Y.A., Yuan, Z.
PDB entry 3wa9: The nucleosome containing human H2A.Z.1
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2013-04-30
Authors: Horikoshi, N., Sato, K., Shimada, K., Arimura, Y., Osakabe, A., Tachiwana, H., Iwasaki, W., Kagawa, W., Harata, M., Kimura, H., Kurumizaka, H.
PDB entry 3waa: The nucleosome containing human H2A.Z.2
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2013-04-30
Authors: Horikoshi, N., Sato, K., Shimada, K., Arimura, Y., Osakabe, A., Tachiwana, H., Iwasaki, W., Kagawa, W., Harata, M., Kimura, H., Kurumizaka, H.
PDB entry 3wab: Carboxypeptidase B in complex with DD2
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.154 Å
Deposited: 2013-05-01
Authors: Yoshimoto, N., Itoh, T., Inaba, Y., Yamamoto, K.
PDB entry 3wad: Crystal structure of glycosyltransferase VinC involved in the biosynthesis of vicenistatin
Classification: TRANSFERASE
Source organism: Streptomyces halstedii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-05-02
Authors: Nango, E., Minami, A., Kumasaka, T., Eguchi, T.
PDB entry 3wae: X-ray structure of Fe(III)-bicarbonates-ttfbpa, a ferric ion-binding protein from thermus thermophilus HB8
Classification: METAL BINDING PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-05-02
Authors: Wang, S., Ogata, M., Horita, S., Ohtsuka, J., Nagata, K., Tanokura, M.
PDB entry 3waf: X-ray structure of apo-TtFbpA, a ferric ion-binding protein from thermus thermophilus HB8
Classification: METAL BINDING PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-02
Authors: Wang, S., Ogata, M., Horita, S., Ohtsuka, J., Nagata, K., Tanokura, M.
PDB entry 3wag: Crystal structure of glycosyltransferase VinC in complex with DTDP
Classification: TRANSFERASE
Source organism: Streptomyces halstedii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-05-02
Authors: Nango, E., Minami, A., Kumasaka, T., Eguchi, T.
PDB entry 3wah: Crystal Structure of HasAp with Iron MesoporphyrinIX
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2013-05-02
Authors: Shirataki, C., Shoji, O., Sugimoto, H., Shiro, Y., Watanabe, Y.
PDB entry 3wai: Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (AfAglB-L, O29867_ARCFU) from Archaeoglobus fulgidus as a MBP fusion
Classification: TRANSFERASE, TRANSPORT PROTEIN
Source organism: Archaeoglobus fulgidus; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.897 Å
Deposited: 2013-05-03
Authors: Matsumoto, S., Shimada, A., Kohda, D.
PDB entry 3waj: Crystal structure of the Archaeoglobus fulgidus oligosaccharyltransferase (O29867_ARCFU) complex with Zn and sulfate
Classification: TRANSFERASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2013-05-03
Authors: Matsumoto, S., Shimada, A., Kohda, D.
PDB entry 3wak: Crystal structure of the Archaeoglobus fulgidus oligosaccharyltransferase (O29867_ARCFU) in the apo form
Classification: TRANSFERASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.413 Å
Deposited: 2013-05-03
Authors: Matsumoto, S., Shimada, A., Kohda, D.
PDB entry 3wal: Crystal structure of human LC3A_2-121
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-05-06
Authors: Suzuki, H., Tabata, K., Morita, E., Kawasaki, M., Kato, R., Dobson, R.C.J., Yoshimori, T., Wakatsuki, S.
PDB entry 3wam: Crystal structure of human LC3C_8-125
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-05-06
Authors: Suzuki, H., Tabata, K., Morita, E., Kawasaki, M., Kato, R., Dobson, R.C.J., Yoshimori, T., Wakatsuki, S.
PDB entry 3wan: Crystal structure of Atg13 LIR-fused human LC3A_2-121
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2013-05-06
Authors: Suzuki, H., Tabata, K., Morita, E., Kawasaki, M., Kato, R., Dobson, R.C.J., Yoshimori, T., Wakatsuki, S.
PDB entry 3wao: Crystal structure of Atg13 LIR-fused human LC3B_2-119
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-05-06
Authors: Suzuki, H., Tabata, K., Morita, E., Kawasaki, M., Kato, R., Dobson, R.C.J., Yoshimori, T., Wakatsuki, S.
PDB entry 3wap: Crystal structure of Atg13 LIR-fused human LC3C_8-125
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2013-05-06
Authors: Suzuki, H., Tabata, K., Morita, E., Kawasaki, M., Kato, R., Dobson, R.C.J., Yoshimori, T., Wakatsuki, S.
PDB entry 3waq: Hemerythrin-like domain of DcrH I119E mutant (met)
Classification: METAL BINDING PROTEIN
Source organism: Desulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-07
Authors: Okamoto, Y., Onoda, A., Sugimoto, H., Takano, Y., Hirota, S., Kurtz Jr., D.M., Shiro, Y., Hayashi, T.
PDB entry 3war: Crystal structure of human CK2a
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2013-05-07
Authors: Kinoshita, T., Nakaniwa, T., Sekiguchi, Y., Sogabe, Y., Sakurai, A., Nakamura, S., Nakanishi, I.
PDB entry 3was: Crystal structure of 4-O-beta-D-mannosyl-D-glucose phosphorylase MGP complexed with Man-Glc+PO4
Classification: TRANSFERASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-05-08
Authors: Nakae, S., Ito, S., Higa, M., Senoura, T., Wasaki, J., Hijikata, A., Shionyu, M., Ito, S., Shirai, T.
PDB entry 3wat: Crystal structure of 4-O-beta-D-mannosyl-D-glucose phosphorylase MGP complexed with Man+Glc
Classification: TRANSFERASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-05-08
Authors: Nakae, S., Ito, S., Higa, M., Senoura, T., Wasaki, J., Hijikata, A., Shionyu, M., Ito, S., Shirai, T.
PDB entry 3wau: Crystal structure of 4-O-beta-D-mannosyl-D-glucose phosphorylase MGP complexed with M1P
Classification: TRANSFERASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-05-08
Authors: Nakae, S., Ito, S., Higa, M., Senoura, T., Wasaki, J., Hijikata, A., Shionyu, M., Ito, S., Shirai, T.
PDB entry 3wav: Crystal Structure of Autotaxin in Complex with Compound 10
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.797 Å
Deposited: 2013-05-09
Authors: Nishimasu, H., Ishitani, R., Nureki, O.
PDB entry 3waw: Crystal Structure of Autotaxin in Complex with 2BoA
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.954 Å
Deposited: 2013-05-09
Authors: Nishimasu, H., Ishitani, R., Nureki, O.
PDB entry 3wax: Crystal Structure of Autotaxin in Complex with 3BoA
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.899 Å
Deposited: 2013-05-09
Authors: Nishimasu, H., Ishitani, R., Nureki, O.
PDB entry 3way: Crystal Structure of Autotaxin in Complex with 4BoA
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.746 Å
Deposited: 2013-05-09
Authors: Nishimasu, H., Ishitani, R., Nureki, O.
PDB entry 3waz: Crystal structure of a restriction enzyme PabI in complex with DNA
Classification: HYDROLASE/DNA
Source organism: Pyrococcus abyssi; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2013-05-10
Authors: Miyazono, K., Miyakawa, T., Ito, T., Tanokura, M.
PDB entry 3wb0: HcgB from Methanocaldococcus jannaschii in complex with light-decomposed FeGP cofactor of [Fe]-hydrogenase
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2013-05-10
Authors: Fujishiro, T., Ermler, U., Shima, S.
PDB entry 3wb1: HcgB from Methanocaldococcus jannaschii
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-05-11
Authors: Tamura, H., Fujishiro, T., Ermler, U., Shima, S.
PDB entry 3wb2: HcgB from Methanocaldococcus jannaschii in complex with the guanylyl-pyridinol product in a model reaction of [Fe]-hydrogenase cofactor biosynthesis
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2013-05-11
Authors: Fujishiro, T., Ermler, U., Shima, S.
PDB entry 3wb4: Crystal Structure of beta secetase in complex with 2-amino-3,6-dimethyl-6-(2-phenylethyl)-3,4,5,6-tetrahydropyrimidin-4-one
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-05-13
Authors: Yonezawa, S., Fujiwara, K., Yamamoto, T., Hattori, K., Yamakawa, H., Muto, C., Hosono, M., Tanaka, Y., Nakano, T., Takemoto, H., Arisawa, M., Shuto, S.
PDB entry 3wb5: Crystal Structure of beta secetase in complex with (6S)-2-amino-3,6-dimethyl-6-[(1R,2R)-2-phenylcyclopropyl]-3,4,5,6-tetrahydropyrimidin-4-one
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2013-05-13
Authors: Yonezawa, S., Fujiwara, K., Yamamoto, T., Hattori, K., Yamakawa, H., Muto, C., Hosono, M., Tanaka, Y., Nakano, T., Takemoto, H., Arisawa, M., Shuto, S.
PDB entry 3wb8: Crystal Structure of MyoVa-GTD
Classification: MOTOR PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.499 Å
Deposited: 2013-05-13
Authors: Wei, Z., Liu, X., Yu, C., Zhang, M.
PDB entry 3wb9: Crystal Structures of meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum
Classification: OXIDOREDUCTASE
Source organism: Symbiobacterium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2013-05-14
Authors: Liu, W.D., Li, Z., Huang, C.H., Guo, R.T., Wu, Q.Q., Zhu, D.M.
PDB entry 3wba: Rice Os3BGlu6 E178Q with Covalent Glucosyl Moiety from p-nitrophenyl glucopyranoside.
Classification: HYDROLASE
Source organism: Oryza sativa Japonica Group
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-05-14
Authors: Sansenya, S., Hua, Y., Cairns, J.R.K.
PDB entry 3wbb: Crystal Structures of meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum
Classification: OXIDOREDUCTASE
Source organism: Symbiobacterium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2013-05-14
Authors: Liu, W.D., Li, Z., Huang, C.H., Guo, R.T., Wu, Q.Q., Zhu, D.M.
PDB entry 3wbd: Crystal structure of anti-polysialic acid antibody single chain Fv fragment (mAb735) complexed with octasialic acid
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-05-14
Authors: Nagae, M., Ikeda, A., Hanashima, S., Kitajima, K., Sato, C., Yamaguchi, Y.
PDB entry 3wbe: Rice Os3BGlu6 Beta-Glucosidase E178Q mutant in a covalent complex with Glc from GA4GE.
Classification: HYDROLASE
Source organism: Oryza sativa Japonica Group
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2013-05-14
Authors: Sansenya, S., Hua, Y., Cairns, J.R.K.
PDB entry 3wbf: Crystal Structure of meso-diaminopimelate dehydrogenase from Symbiobacterium thermophilum co-crystallized with NADP+ and DAP
Classification: OXIDOREDUCTASE
Source organism: Symbiobacterium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2013-05-15
Authors: Liu, W.D., Li, Z., Huang, C.H., Guo, R.T., Wu, Q.Q., Zhu, D.M.
PDB entry 3wbg: Structure of the human heart fatty acid-binding protein in complex with 1-anilinonaphtalene-8-sulphonic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-05-16
Authors: Hirose, M., Sugiyama, S., Ishida, H., Niiyama, M., Matsuoka, D., Hara, T., Sato, F., Mizohata, E., Murakami, S., Inoue, T., Matsuoka, S., Murata, M.