LiteFold/PDB huggingface dataset:
PDB entry 9r09: Structure of A16/G9 (vaccinia virus) in complex with VHH D07 at pH 5.7
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2025-04-24
Authors: Vernuccio, R., Meola, A., Guardado-Calvo, P.
PDB entry 9r0a: Cryo-EM structure of rat SLCO2A1 bound to fentiazac.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-24
Authors: Joshi, C., Newstead, S.
PDB entry 9r0b: Structure of A16/G9 (vaccinia virus) in complex with VHH D07 at pH 6.5
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2025-04-24
Authors: Vernuccio, R., Meola, A., Guardado-Calvo, P.
PDB entry 9r0d: Human CD73 (ecto 5'-nucleotidase) in complex with compound 7
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-04-24
Authors: Moore, J.T., Ivic, N., Lammens, A., Krapp, S., Maskos, K.
PDB entry 9r0e: Structure of the human heterotetrameric cis-prenyltransferase complex harboring NgBR-S249T in complex with magnesium, FsPP and IPP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2025-04-24
Authors: Giladi, M., Haitin, Y.
PDB entry 9r0g: Human CD73 (ecto 5'-nucleotidase) in complex with compound 21
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2025-04-24
Authors: Moore, J.T., Ivic, N., Lammens, A., Krapp, S., Maskos, K.
PDB entry 9r0h: Human CD73 (ecto 5'-nucleotidase) in complex with compound 6 (ORIC-533)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2025-04-24
Authors: Moore, J.T., Ivic, N., Lammens, A., Krapp, S., Maskos, K.
PDB entry 9r0i: Cryo-EM structure of rat SLCO2A1 bound to losartan.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-24
Authors: Joshi, C., Newstead, S.
PDB entry 9r0j: Structure of A16/G9 (vaccinia virus) in complex with VHH D07 at pH 7.2
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2025-04-24
Authors: Vernuccio, R., Meola, A., Guardado-Calvo, P.
PDB entry 9r0k: Structure of the human heterotetrameric cis-prenyltransferase complex in its apo form
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2025-04-24
Authors: Giladi, M., Haitin, Y.
PDB entry 9r0l: Three dimensional structure of human carbonic anhydrase XII in complex with sulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-04-24
Authors: Eimonta, V., Leitans, J., Tars, K.
PDB entry 9r0m: Cryo-EM structure of rat SLCO2A1 bound to prostaglandin E2.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-24
Authors: Deme, J.C., Goult, J., Lea, S.M., Newstead, S.
PDB entry 9r0n: Cryo-EM structure of rat SLCO2A1 bound to dinoprost.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-04-24
Authors: Deme, J.C., Joshi, C., Lea, S.M., Newstead, S.
PDB entry 9r0o: Cryo-EM structure of rat SLCO2A1 bound to tolcapone.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-24
Authors: Deme, J.C., Joshi, C., Lea, S.M., Newstead, S.
PDB entry 9r0p: human FAM118B trimeric filament
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2025-04-24
Authors: Baretic, D., Missoury, S., Patel, K., Coste, F., Delarue, M., Suskiewicz, J.M., Ahel, I.
PDB entry 9r0q: Paraoxonase-1 in complex with terbium(III) and 2-hydroxyquinoline
Classification: HYDROLASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-04-24
Authors: Smerkolj, J., Pavsic, M., Golicnik, M.
PDB entry 9r0r: Class A CTX-M-14 E166A mutant in complex with Oxacillin at room temperature
Classification: PROTEIN BINDING
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-24
Authors: Gore, G., Schulz, E.C.
PDB entry 9r0s: human FAM118B pentameric filament
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2025-04-24
Authors: Baretic, D., Missoury, S., Patel, K., Coste, F., Delarue, M., Suskiewicz, J.M., Ahel, I.
PDB entry 9r0t: De novo designed homodimeric NTF2-like protein with a hydrophobic pocket
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-24
Authors: Nadal, M., Marcos, E.
PDB entry 9r0u: Three dimensional structure of human carbonic anhydrase XII in complex with sulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2025-04-24
Authors: Eimonta, V., Leitans, J., Tars, K.
PDB entry 9r0v: CutC IN COMPLEX WITH Inhibitor
Classification: HYDROLASE
Source organism: Oleidesulfovibrio alaskensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.341 Å
Deposited: 2025-04-24
Authors: Petersen, J.
PDB entry 9r0w: Crystal structure of glutathione transferase iota 1 from Synechocystis sp. PCC 6803 in complex with FMN
Classification: TRANSFERASE
Source organism: Synechocystis sp. PCC 6803
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2025-04-24
Authors: Didierjean, C., Hecker, A., Morette, L.
PDB entry 9r0x: Crystal structure of NDM-1 with thiol compound 14a
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2025-04-24
Authors: Hinchliffe, P., Spencer, J.
PDB entry 9r0y: Crystal structure of NDM-1 with thiol compound 22b
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2025-04-24
Authors: Hinchliffe, P., Spencer, J.
PDB entry 9r0z: De novo designed homodimeric NTF2-like protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-04-24
Authors: Nadal, M., Marcos, E.
PDB entry 9r10: Cryo-EM structure of human MATE1 in complex with cimetidine
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-04-24
Authors: Romane, K., Peteani, G., Mukherjee, S., Kowal, J., Rossi, L., Hou, J., Kossiakoff, A., Lemmin, T., Locher, K.P.
PDB entry 9r11: Structure of the PRYSPRY domain of human MID2, crystal form II
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2025-04-24
Authors: Munoz Sosa, C.J., Zhubi, R., Chaikuad, A., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 9r16: Structure of mutant SHP2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.627 Å
Deposited: 2025-04-25
Authors: Karunaraj, P., Scheele, R., Song, W., Vasan, N.
PDB entry 9r17: De novo designed homodimeric NTF2-like protein with a hydrophobic pocket
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-04-25
Authors: Nadal, M., Marcos, E.
PDB entry 9r18: Structure of Sortilin ECD in complex with TNFa-targeting SORTAC
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.802 Å
Deposited: 2025-04-25
Authors: Gustafsen, C., Larsen, C., Glerup, S.
PDB entry 9r19: Crystal structure of human ACE2 in complex with VHH B07 and VHH B10
Classification: HYDROLASE
Source organism: Homo sapiens; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2025-04-25
Authors: Blachier, S., Vaney, M.C., Fernandez, I., Arbabian, A., Rey, F.A.R., Haouz, A., Brelot, A.
PDB entry 9r1c: Keap1 - inhibitor complex - 1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2025-04-26
Authors: Talapatra, S.K., Kozielski, F., Wells, G.
PDB entry 9r1d: Structure of the H3.V-H4.V variant nucleosome core particle from Trypanosoma brucei
Classification: DNA BINDING PROTEIN
Source organism: synthetic construct; Trypanosoma brucei brucei TREU927
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2025-04-26
Authors: Deak, G., Wilson, M.D.
PDB entry 9r1e: Cryo-EM structure of human MATE1 in complex with MPP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-26
Authors: Romane, K., Peteani, G., Mukherjee, S., Kowal, J., Rossi, L., Hou, J., Kossiakoff, A., Lemmin, T., Locher, K.P.
PDB entry 9r1f: Cryo-EM structure of human MATE1 in complex with metformin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2025-04-26
Authors: Romane, K., Peteani, G., Mukherjee, S., Kowal, J., Rossi, L., Hou, J., Kossiakoff, A., Lemmin, T., Locher, K.P.
PDB entry 9r1g: Cryo-EM structure of human MATE1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2025-04-26
Authors: Romane, K., Peteani, G., Mukherjee, S., Kowal, J., Rossi, L., Hou, J., Kossiakoff, A., Lemmin, T., Locher, K.P.
PDB entry 9r1h: Inward-occluded structure of human glycine transporter 2 bound to substrate glycine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2025-04-26
Authors: Cantwell Chater, R.P., Peiser-Oliver, J., Pati, T.K., Quinn, A.S., Lotsaris, I., Frangos, Z.J., Anderson, K.E., Tischer, A.E., Williams-Noonan, B.J., Aubrey, K.R., O Mara, M.L., Michaelides, M., Mohammadi, S.A., Cioffi, C.L., Vandenberg, R.J., Shahsavar, A.
PDB entry 9r1i: Keap1 - inhibitor complex - 3
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2025-04-27
Authors: Talapatra, S.K., Kozielski, F., Wells, G.
PDB entry 9r1p: Crystal structure of STUB1 complexed with a compound molecule
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2025-04-28
Authors: Chu, Y., Jiang, H.
PDB entry 9r1q: Beluga whale coronavirus spike glycoprotein
Classification: VIRAL PROTEIN
Source organism: Beluga whale coronavirus SW1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.24 Å
Deposited: 2025-04-28
Authors: Hulswit, R.J.G., Hurdiss, D.L.
PDB entry 9r1r: Bottlenose dolphin coronavirus spike glycoprotein
Classification: VIRAL PROTEIN
Source organism: Bottlenose dolphin coronavirus HKU22
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2025-04-28
Authors: Hulswit, R.J.G., Hurdiss, D.L.
PDB entry 9r1w: PLK1 SURFACE ENTROPY REDUCTION (SER) MUTANT IN COMPLEX WITH THIAZOLIDINONE INHIBITOR COMPOUND 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-04-28
Authors: Hillig, R.C., Schulze, V.K., Siemeister, G., Schmitz, A.A., Eberspaecher, U.
PDB entry 9r1x: PLK1 SURFACE ENTROPY REDUCTION (SER) MUTANT IN COMPLEX WITH INHIBITOR BI 2536
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2025-04-28
Authors: Hillig, R.C., Schulze, V.K., Siemeister, G., Schmitz, A.A., Eberspaecher, U.
PDB entry 9r1y: PLK1 SURFACE ENTROPY REDUCTION (SER) MUTANT IN COMPLEX WITH INHIBITOR GSK461364
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.602 Å
Deposited: 2025-04-28
Authors: Hillig, R.C., Schulze, V.K., Siemeister, G., Schmitz, A.A., Eberspaecher, U.
PDB entry 9r1z: Keap1 - inhibitor complex - 3
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-04-28
Authors: Talapatra, S.K., Kozielski, F., Wells, G.
PDB entry 9r21: Cryo-EM structure of the flotillin-associated rhodopsin PsFAR in detergent micelle
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Pseudothioglobus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2025-04-29
Authors: Kovalev, K., Stetsenko, A., Marin, E., Guskov, A.
PDB entry 9r22: Cryo-EM structure of the light-driven proton pump PsPR in detergent micelle
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Pseudothioglobus sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2025-04-29
Authors: Kovalev, K., Stetsenko, A., Guskov, A.
PDB entry 9r23: Cryo-EM structure of the double mutant H84V/E120G of the flotillin-associated rhodopsin PsFAR in detergent micelle
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Pseudothioglobus sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2025-04-29
Authors: Kovalev, K., Stetsenko, A., Guskov, A.
PDB entry 9r2e: Structure of ARGX-121 Fab fragment in complex with the Fc fragment of IgA1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2025-04-30
Authors: Pannecoucke, E., Voet, S., Deweirdt, L., Verbeiren, J., Gabriels, S., Provost, M., Freier, R., Koenig, J., Lammens, A., Silence, K.
PDB entry 9r2f: Tau filaments seeded by AD homogenate using 0N3R C322A
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-04-30
Authors: Lovestam, S., Scheres, H.W.S.
PDB entry 9r2g: Cytochrome bd II oxidase qOR-2 type from Mycobacterium smegmatis
Classification: ELECTRON TRANSPORT
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-04-30
Authors: Kovalova, T., Janczak, M., Adelroth, P., Hogbom, M.
PDB entry 9r2h: Tau filaments seeded by AD homogenate using 0N3R C322S
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-04-30
Authors: Lovestam, S., Scheres, H.W.S.
PDB entry 9r2i: Cryo-EM structure of the complex CDK16:CCNY:14-3-3
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-04-30
Authors: Kosek, D., Kohoutova, K., Obsilova, V., Obsil, T.
PDB entry 9r2j: Crystal structure of human MAO B in complex with (E)-3-(4-nitrophenyl)-1-(3-(trifluoromethyl)phenyl)prop-2-en-1-one (chalcone inhibitor, 4a)
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-30
Authors: Marchese, S., Binda, C.
PDB entry 9r2k: De novo designed N30 protein fold
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2025-04-30
Authors: Pacesa, M., Miao, Y., Georgeon, S., Schmidt, J., Correia, B.E.
PDB entry 9r2l: De novo designed N37 protein fold
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-04-30
Authors: Pacesa, M., Miao, Y., Georgeon, S., Schmidt, J., Correia, B.E.
PDB entry 9r2m: p53 bound to nucleosome at position SHL+5.9 (non-crosslinked sample, composite map)
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-04-30
Authors: Chakraborty, D., Kater, L., Kempf, G., Cavadini, S., Thoma, N.H.
PDB entry 9r2n: Cryo-EM structure of the complex CCNY:14-3-3
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.83 Å
Deposited: 2025-04-30
Authors: Kosek, D., Kohoutova, K., Obsilova, V., Obsil, T.
PDB entry 9r2o: De novo designed N5 protein fold
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2025-04-30
Authors: Pacesa, M., Miao, Y., Georgeon, S., Schmidt, J., Correia, B.E.
PDB entry 9r2p: p53 bound to nucleosome at position SHL+5.9 (crosslinked sample)
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.18 Å
Deposited: 2025-04-30
Authors: Chakraborty, D., Kater, L., Kempf, G., Cavadini, S., Thoma, N.H.
PDB entry 9r2q: p53 bound to nucleosome at position SHL-5.7 (non-crosslinked sample)
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-30
Authors: Chakraborty, D., Michael, A.K., Kempf, G., Cavadini, S., Kater, L., Thoma, N.H.
PDB entry 9r2r: De novo designed M7 protein fold
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2025-04-30
Authors: Pacesa, M., Miao, Y., Georgeon, S., Schmidt, J., Correia, B.E.
PDB entry 9r2s: Structure of the S.aureus ClpP degradation chamber in the context of the MecA/ClpC/CLpC complex
Classification: CHAPERONE
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2025-04-30
Authors: Azinas, S., Wallden, K., Katikaridis, P., Schahl, A., Mogk, A., Carroni, M.
PDB entry 9r2v: De novo designed M16 protein fold
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2025-05-01
Authors: Pacesa, M., Miao, Y., Georgeon, S., Schmidt, J., Correia, B.E.
PDB entry 9r2z: RptR transcriptional repressor
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli O127:H6 str. E2348/69
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-05-01
Authors: Zhang, Y., Schuller, M., Ahel, I., Blower, T.R., Exley, R.M., Tang, C.M.
PDB entry 9r30: Three dimensional structure of human carbonic anhydrase IX in complex with sulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-05-02
Authors: Leitans, J., Tars, K.
PDB entry 9r31: Three dimensional structure of human carbonic anhydrase XII in complex with sulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2025-05-02
Authors: Eimonta, V., Leitans, J., Tars, K.
PDB entry 9r34: Norovirus NS3 hexamer in complex with ATP-gamma-S
Classification: VIRAL PROTEIN
Source organism: Norwalk virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-05-02
Authors: Haas, M., Hurdiss, D.L.
PDB entry 9r35: Crystal structure of the Pseudomonas putida Xre-RES toxin-antitoxin complex bound to promoter DNA
Classification: GENE REGULATION
Source organism: Pseudomonas putida KT2440; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-05-02
Authors: Henriksen, F.O.G., Brodersen, D.E.
PDB entry 9r3a: Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli BL21(DE3)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2025-05-03
Authors: Jurkeviciute, G., He, J.Z., Enchev, R.I.
PDB entry 9r3b: Recombinant human Butyrylcholinesterase in complex with N-([(3R)-1-benzylpiperidin-3-yl]methyl)-N-(2-methoxyethyl)naphthalene-2-sulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-05-03
Authors: Brazzolotto, X., Kosac, U., Gobec, S., Nachon, F.
PDB entry 9r3c: Recombinant human butyrylcholinesterase in complex with N-([(3S)-1-benzylpiperidin-3-yl]methyl)-N-(2-methoxyethyl)naphthalene-2-sulfonamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2025-05-03
Authors: Brazzolotto, X., Kosak, U., Gobec, S., Nachon, F.
PDB entry 9r3e: Human FAM118B(34-334) 2 protomers
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2025-05-05
Authors: Missoury, S., Coste, F., Baretic, D., Patel, K., Delarue, M., Ahel, I., Suskiewicz, M.J.
PDB entry 9r3h: Structure of liver pyruvate kinase in complex with fluorescent probe 4b
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-05-05
Authors: Bogucka, A., Nilsson, O., Grotli, M., Hyvonen, M.
PDB entry 9r3i: Structure of liver pyruvate kinase in complex with fluorescent probe 4c
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.579 Å
Deposited: 2025-05-05
Authors: Bogucka, A., Nilsson, O., Grotli, M., Hyvonen, M.
PDB entry 9r3j: Crystal structure of human MAO B in complex with (E)-3-(benzo[d][1,3]dioxol-5-yl)-1-(3-(trifluoromethyl)phenyl)prop-2-en-1-one (chalcone inhibitor, 4e)
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-05-05
Authors: Marchese, S., Binda, C.
PDB entry 9r3k: Crystal structure of human MAO B in complex with ((E)-3-(3-nitrophenyl)-1-(3-(trifluoromethyl)phenyl)prop-2-en-1-one (4b)
Classification: FLAVOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-05-05
Authors: Marchese, S., Binda, C.
PDB entry 9r3l: Structure of liver pyruvate kinase in complex with fluorescent probe 4d
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.158 Å
Deposited: 2025-05-05
Authors: Bogucka, A., Nilsson, O., Grotli, M., Hyvonen, M.
PDB entry 9r3m: Structure of liver pyruvate kinase in complex with fluorescent probe 8a
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.062 Å
Deposited: 2025-05-05
Authors: Bogucka, A., Nilsson, O., Grotli, M., Hyvonen, M.
PDB entry 9r3o: Structure of liver pyruvate kinase in complex with fluorescent probe 4a
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.045 Å
Deposited: 2025-05-05
Authors: Bogucka, A., Nilsson, O., Grotli, M., Hyvonen, M.
PDB entry 9r3w: Fungal tRNA ligase Trl1-LIG-KIN
Classification: LIGASE
Source organism: Thermochaetoides thermophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2025-05-06
Authors: Peschek, J., Koehler, S.
PDB entry 9r3y: Solution NMR structure of N-WASP GBD in complex with EspFu R5
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2025-05-06
Authors: Tossavainen, H., Permi, P.
PDB entry 9r3z: Exploiting ALDH1A2 and ALDH1A3 Isoform Variability for Crystallization Screening
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-05-06
Authors: Garaavglia, S., Mazzorana, M.
PDB entry 9r40: HaloTag bound to compound MRC71
Classification: LIGASE
Source organism: Rhodococcus sp. (in: high G+C Gram-positive bacteria)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.043 Å
Deposited: 2025-05-06
Authors: Luptak, J.
PDB entry 9r43: FAD-dependent oxidoreductase McrA
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lavendulae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-05-07
Authors: Tjallinks, G., Mattevi, A.
PDB entry 9r45: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Xylose isomerase (apo state)
Classification: ISOMERASE
Source organism: Streptomyces rubiginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2025-05-07
Authors: Hatton, C.E., Spiliopoulou, M., Schulz, E.C., Mehrabi, P.
PDB entry 9r46: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Xylose isomerase bound with glucose (25 ms soaking)
Classification: ISOMERASE
Source organism: Streptomyces rubiginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-05-07
Authors: Hatton, C.E., Spiliopoulou, M., Schulz, E.C., Mehrabi, P.
PDB entry 9r47: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Xylose isomerase bound with glucose (50 ms soaking)
Classification: ISOMERASE
Source organism: Streptomyces rubiginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-05-07
Authors: Hatton, C.E., Spiliopoulou, M., Schulz, E.C., Mehrabi, P.
PDB entry 9r48: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Human insulin, pH 9.0 (apo state)
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-05-07
Authors: Spiliopoulou, M., Hatton, C.E., Mehrabi, P., Schulz, E.C.
PDB entry 9r49: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Human insulin, pH 4.5 (25 ms soaking)
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.641 Å
Deposited: 2025-05-07
Authors: Spiliopoulou, M., Hatton, C.E., Mehrabi, P., Schulz, E.C.
PDB entry 9r4a: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Human insulin, pH 4.5 (50 ms soaking)
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-05-07
Authors: Spiliopoulou, M., Hatton, C.E., Mehrabi, P., Schulz, E.C.
PDB entry 9r4b: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Human insulin, pH 4.5 (250 ms soaking)
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-05-07
Authors: Spiliopoulou, M., Hatton, C.E., Mehrabi, P., Schulz, E.C.
PDB entry 9r4c: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Human insulin, pH 4.5 (500 ms soaking)
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2025-05-07
Authors: Spiliopoulou, M., Hatton, C.E., Mehrabi, P., Schulz, E.C.
PDB entry 9r4e: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Human insulin, pH 4.5 (5 s soaking)
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-05-07
Authors: Spiliopoulou, M., Hatton, C.E., Mehrabi, P., Schulz, E.C.
PDB entry 9r4f: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: T4 Lysozyme, mutant L99A (apo state)
Classification: HYDROLASE
Source organism: Escherichia phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-05-07
Authors: Spiliopoulou, M., Hatton, C.E., Mehrabi, P., Schulz, E.C.
PDB entry 9r4g: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: T4 Lysozyme, mutant L99A bound with indole (1 s soaking)
Classification: HYDROLASE
Source organism: Escherichia phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-05-07
Authors: Spiliopoulou, M., Hatton, C.E., Mehrabi, P., Schulz, E.C.
PDB entry 9r4h: Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: T4 Lysozyme, mutant L99A bound with indole (10 s soaking)
Classification: HYDROLASE
Source organism: Escherichia phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2025-05-07
Authors: Spiliopoulou, M., Hatton, C.E., Mehrabi, P., Schulz, E.C.
PDB entry 9r4i: An auto inhibitory loop in the MiDAC histone deacetylase complex
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2025-05-07
Authors: Fairall, L., Schwabe, J.W.R.
PDB entry 9r4j: CryoEM structure of MraZ in complex with its promoter from Mycoplasma genitalium
Classification: DNA BINDING PROTEIN
Source organism: Mycoplasmoides genitalium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2025-05-07
Authors: Reverter, D., Sanchez-Alba, L., Durand, A.
PDB entry 9r4k: Crystal structure of CtGH76 from Chaetomium thermophilum
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4l: Crystal structure of CtGH76 from Chaetomium thermophilum in complex with mannose
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4m: Crystal structure of CtGH76 from Chaetomium thermophilum in complex with mannose products form
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4n: Crystal structure of CtGH76 from Chaetomium thermophilum
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4o: Crystal structure of inactive (D163N) variant CtGH76 from Chaetomium thermophilum in complex with alpha-1,6-mannobiose
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4p: Crystal structure of inactive (D164N) variant CtGH76 from Chaetomium thermophilum in complex with alpha-1,6-mannobiose
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4q: Crystal structure of CtGH76 from Chaetomium thermophilum in complex with alpha-1,3-1,6-mannotriose
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4r: Crystal structure of CtGH76 from Chaetomium thermophilum in complex with glucosamine
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4s: Crystal structure of CtGH76 from Chaetomium thermophilum in complex with laminaribiose
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4t: Crystal structure of CtGH76 from Chaetomium thermophilum in complex with glucose
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4u: Crystal structure of CtGH76 from Chaetomium thermophilum in complex with isomaltose
Classification: HYDROLASE
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2025-05-07
Authors: Po-Hsun, W., Essen, L.-O.
PDB entry 9r4v: Solution structure of N-WASP GBD in complex with EspF
Classification: CELL INVASION
Source organism: Escherichia coli; Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2025-05-08
Authors: Tossavainen, H., Permi, P.
PDB entry 9r4w: Solution NMR structure of SNX9 SH3 in complex with EspF
Classification: CELL INVASION
Source organism: Escherichia coli; Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2025-05-08
Authors: Tossavainen, H., Permi, P.
PDB entry 9r4x: 13 protofilament P. falciparum paclitaxel stabilised GDP microtubule
Classification: STRUCTURAL PROTEIN
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-05-08
Authors: Bangera, M., Moores, C.A.
PDB entry 9r4y: 15 protofilament P. falciparum GMPCPP microtubule
Classification: STRUCTURAL PROTEIN
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-05-08
Authors: Bangera, M., Moores, C.A.
PDB entry 9r4z: Murine AA amyloid fibril morphology III (AA III)
Classification: PROTEIN FIBRIL
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-05-08
Authors: Andreotti, G., Schmidt, M., Faendrich, M.
PDB entry 9r50: Supercoiling bacterial archaellum filament from L. aerophila
Classification: PROTEIN FIBRIL
Source organism: Litorilinea aerophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-05-08
Authors: Sivabalasarma, S., Taib, N., Mollat, C.L., Joest, M., Steimle, S., Gribaldo, S., Albers, S.-V.
PDB entry 9r51: Dimeric state of the F420-reducing hydrogenase from Methanothermococcus thermolithotrophicus in crystalline form 1
Classification: OXIDOREDUCTASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-05-08
Authors: Jespersen, M., Lemaire, O.N., Wagner, T.
PDB entry 9r52: Dimeric state of the F420-reducing hydrogenase from Methanothermococcus thermolithotrophicus in crystalline form 2
Classification: OXIDOREDUCTASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-05-08
Authors: Jespersen, M., Lemaire, O.N., Wagner, T.
PDB entry 9r57: Crystal structure of human protein kinase CK2 catalytic subunit (isoenzyme ck2alpha'; CSNK2A2 gene product) in complex with 5,6-dibromo-1H-1,2,3-benzotriazole
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2025-05-08
Authors: Kasperowicz, S., Werner, C., Podsiadla-Bialoskorska, M., Szolajska, E., Lindenblatt, D., Niefind, K., Poznanski, J., Winiewska-Szajewska, M.
PDB entry 9r59: Crystal structure of MAPKAPK2 with a covalent compound GCL334 targeting lysine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-05-08
Authors: Wang, G.Q., Hillebrand, L., Gehringer, M., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 9r5b: Crystal structure of human protein kinase CK2 catalytic subunit (isoenzyme ck2alpha'; CSNK2A2 gene product) in complex with 6,7-dibromo-4,5-difluoro-1H-1,2,3-benzotriazole
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2025-05-08
Authors: Kasperowicz, S., Werner, C., Podsiadla-Bialoskorska, M., Szolajska, E., Lindenblatt, D., Niefind, K., Poznanski, J., Winiewska-Szajewska, M.
PDB entry 9r5c: Crystal structure of human protein kinase CK2 catalytic subunit (isoenzyme ck2alpha'; CSNK2A2 gene product) in complex with 4,7-dibromo-5,6-difluoro-1H-1,2,3-benzotriazole
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2025-05-08
Authors: Kasperowicz, S., Werner, C., Podsiadla-Bialoskorska, M., Szolajska, E., Lindenblatt, D., Niefind, K., Poznanski, J., Winiewska-Szajewska, M.
PDB entry 9r5d: Crystal structure of human protein kinase CK2 catalytic subunit (isoenzyme ck2alpha'; CSNK2A2 gene product) in complex with 4,6-dibromo-5,7-difluoro-1H-1,2,3-benzotriazole
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2025-05-08
Authors: Kasperowicz, S., Werner, C., Podsiadla-Bialoskorska, M., Szolajska, E., Lindenblatt, D., Niefind, K., Poznanski, J., Winiewska-Szajewska, M.
PDB entry 9r5f: Crystal structure of human protein kinase CK2 catalytic subunit (isoenzyme ck2alpha'; CSNK2A2 gene product) in complex with 5,6-dibromo-4,7-difluoro-1H-1,2,3-benzotriazole
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2025-05-08
Authors: Kasperowicz, S., Werner, C., Podsiadla-Bialoskorska, M., Szolajska, E., Lindenblatt, D., Niefind, K., Poznanski, J., Winiewska-Szajewska, M.
PDB entry 9r5i: Dimeric state of the F420-reducing hydrogenase from Methanothermococcus thermolithotrophicus in crystalline form 3
Classification: OXIDOREDUCTASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 3.13 Å
Deposited: 2025-05-08
Authors: Jespersen, M., Lemaire, O.N., Wagner, T.
PDB entry 9r5k: Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Classification: GENE REGULATION
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2025-05-09
Authors: Sundaramoorthy, R., Hughes, A., Owen-hughes, T.A.
PDB entry 9r5s: Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-05-09
Authors: Sundaramoorthy, R., Hughes, A., Owen-hughes, T.A.
PDB entry 9r5t: NSP14 IN COMPLEX WITH LIGAND TDI-016037-NX-1
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2025-05-09
Authors: Steinbacher, S., Meyer, C.
PDB entry 9r5w: Structural characterisation of chromatin remodelling intermediates supports linker DNA dependent product inhibition as a mechanism for nucleosome spacing.
Classification: GENE REGULATION
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-05-10
Authors: Sundaramoorthy, R., Hughes, A., Owen-hughes, T.A.
PDB entry 9r5y: Crystal structure of the C-terminal domain of human TNC in complex with Adhiron 52
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.399 Å
Deposited: 2025-05-11
Authors: Gaule, T.G., Trinh, C., Simmons, K.J., Tomlinson, D.C., Maqbool, A.
PDB entry 9r5z: Crystal structure of JAK3 with GCL258
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-05-11
Authors: Wang, G.Q., Chaikuad, A., Hillebrand, L., Gehringer, M., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 9r60: CPS translocon Wza_C1
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r61: CPS translocon Wza_C8
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r62: CPS co-polymerase Wzc_C1
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r63: CPS co-polymerase Wzc_C4
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r64: CPS secretion pathway Wza-Wzc_C1 (Conf 0)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r65: CPS secretion pathway Wza-Wzc_C8 (Conf 0)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r66: CPS secretion pathway Wza-Wzc_C1 (Conf 1)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r67: CPS secretion pathway Wza-Wzc_C8 (Conf 1)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r68: CPS secretion pathway Wza-Wzc_C1 (Conf 2)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.8 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r69: CPS secretion pathway Wza-Wzc_C8 (Conf 2)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r6a: CPS secretion pathway Wza-Wzc (Conf 3)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.3 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r6b: CPS secretion pathway Wza-Wzc (Conf 4)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r6c: CPS secretion pathway Wza-Wzc (Conf 5)
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2025-05-11
Authors: Yuan, B., Heinz, D.W.
PDB entry 9r6d: Structural characterization of a trehalose-binding site in human RNase2
Classification: PROTEIN BINDING
Source organism: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Experimental method: X-RAY DIFFRACTION
Resolution: 0.94 Å
Deposited: 2025-05-11
Authors: Xincheng, K., Jiarui, L., Prats-Ejarque, G., Boix, E.
PDB entry 9r6e: Structural characterization of a N-Acetyl-D-glucosamine-binding site in human RNase2
Classification: PROTEIN BINDING
Source organism: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2025-05-12
Authors: Li, J., Xincheng, K., Prats-Ejarque, G., Boix, E.
PDB entry 9r6h: Crystal Structure of the M18BP1 SANTA domain as a EGFP-SANTA-nanobody fusion
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2025-05-12
Authors: Pan, D., Vetter, I.R., Musacchio, A.
PDB entry 9r6i: Crystal structure of PPARgamma in complex with the bisphenol derivative BPS4BE
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-05-12
Authors: Carivenc, C., Bourguet, W.
PDB entry 9r6k: Crystal structure of PPARgamma in complex with the bisphenol derivative BPPH
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-05-12
Authors: Carivenc, C., Bourguet, W.
PDB entry 9r6m: Crystal structure of C14S mutant of triosephosphate isomerase from Chamydomonas reinhardtii
Classification: ISOMERASE
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2025-05-13
Authors: Fermani, S., Fanti, S., Gabellini, G., Zaffagnini, M., Meloni, M., Peppi, G.M.E.
PDB entry 9r6n: Crystal structure of ALDH1A2 in complex with KyA33
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2025-05-13
Authors: Fang, C., Esposito, M., Huang, J., Kang, Y.
PDB entry 9r6o: Local refinement of the N-terminal domain (NTD) and receptor binding domain (RBD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the closed conformation
Classification: VIRAL PROTEIN
Source organism: Porcine hemagglutinating encephalomyelitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2025-05-13
Authors: Fernandez, I., Rey, F.A.
PDB entry 9r6p: Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the closed conformation bound to 9-O-Ac-Sia.
Classification: VIRAL PROTEIN
Source organism: Porcine hemagglutinating encephalomyelitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-05-13
Authors: Fernandez, I., Rey, F.A.
PDB entry 9r6q: Local refinement of the N-terminal domain (NTD) and receptor binding domain (RBD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the closed conformation bound to 9-O-Ac-Sia
Classification: VIRAL PROTEIN
Source organism: Porcine hemagglutinating encephalomyelitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-05-13
Authors: Fernandez, I., Rey, F.A.
PDB entry 9r6r: Local refinement of the N-terminal domain (NTD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the open conformation bound to 9-O-Ac-Sia
Classification: VIRAL PROTEIN
Source organism: Porcine hemagglutinating encephalomyelitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-05-13
Authors: Fernandez, I., Rey, F.A.
PDB entry 9r6s: Prefusion stabilized spike glycoprotein of human coronavirus OC43.
Classification: VIRAL PROTEIN
Source organism: Human coronavirus OC43
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-05-13
Authors: Melchers, J.M., Hulswit, R.J.G., Hurdiss, D.L.
PDB entry 9r6t: Prefusion stabilized spike glycoprotein of equine coronavirus.
Classification: VIRAL PROTEIN
Source organism: Equine coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2025-05-13
Authors: Melchers, J.M., Hulswit, R.J.G., Hurdiss, D.L.
PDB entry 9r6u: Crystal structure of E. coli Adenylate kinase K47A mutant in complex with inhibitor Ap5A
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2025-05-13
Authors: Phoeurk, C., Wolf-Watz, M., Sauer-Eriksson, A.E.
PDB entry 9r6v: Crystal structure of the DOC domain of the E3 ligase HECTD3
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2025-05-13
Authors: Esposito, D., Huber, J., Maslen, S., Rittinger, K.
PDB entry 9r6y: Pyrin B30.2 domain, FMF mutation R653H
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2025-05-13
Authors: Mittl, P., Possner, D.
PDB entry 9r6z: Cubic state of the F420-reducing hydrogenase from Methanothermococcus thermolithotrophicus
Classification: OXIDOREDUCTASE
Source organism: Methanothermococcus thermolithotrophicus DSM 2095
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2025-05-13
Authors: Jespersen, M., Lemaire, O.N., Wagner, T.
PDB entry 9r70: Pyrin B30.2 domain, FMF mutation M680L
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-05-13
Authors: Mittl, P., Possner, D.