LiteFold/PDB huggingface dataset:
PDB entry 7rn1: Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor Jun9-62-2R
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-07-28
Authors: Sacco, M., Chen, Y.
PDB entry 7rn2: Crystal structure of the first bromodomain of human BRD4 in complex with SJ001010551-2
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2021-07-28
Authors: Stachowski, T.R., Fischer, M.
PDB entry 7rn3: hyen D solution structure
Classification: PLANT PROTEIN
Source organism: Hybanthus enneaspermus
Experimental method: SOLUTION NMR
Deposited: 2021-07-29
Authors: Du, Q., Huang, Y.H., Craik, D.J., Wang, C.K.
PDB entry 7rn4: Room temperature X-ray structure of SARS-CoV-2 main protease (Mpro) in complex with HL-3-69
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-07-29
Authors: Kovalevsky, A., Kneller, D.W., Coates, L.
PDB entry 7rn5: Discovery of an Anion-Dependent Farnesyltransferase Inhibitor from a Phenotypic Screen
Classification: TRANSFERASE/INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2021-07-29
Authors: Hruza, A., Strickland, C.L.
PDB entry 7rn6: High-resolution crystal structure of human JAK2 kinase domain (JH1) bound to type-II inhibitor BBT594
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-07-29
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7rn7: Crystal structure of caspase-3 with inhibitor Ac-VD(Aly)VD-CHO
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rn8: Crystal structure of caspase-3 with inhibitor Ac-VD(Orn)VD-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rn9: Crystal structure of caspase-3 with inhibitor Ac-VDFVD-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rna: Crystal structure of caspase-3 with inhibitor Ac-ITV(Dab)D-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rnb: Crystal structure of caspase-3 with inhibitor Ac-VDRVD-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rnc: Crystal structure of caspase-3 with inhibitor Ac-VDVVD-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rnd: Crystal structure of caspase-3 with inhibitor Ac-VDPVD-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rne: Crystal structure of caspase-3 with inhibitor Ac-YKPVD-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rnf: Crystal structure of caspase-3 with inhibitor Ac-VDKVD-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rng: Crystal structure of caspase-3 with inhibitor Ac-ITAKD-CHO
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-07-29
Authors: McCue, W., Finzel, B.C.
PDB entry 7rnh: Room temperature X-ray structure of SARS-CoV-2 main protease (Mpro) in complex with HL-3-45
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-07-29
Authors: Kovalevsky, A., Kneller, D.W., Coates, L.
PDB entry 7rni: Discovery of an Anion-Dependent Farnesyltransferase Inhibitor from a Phenotypic Screen
Classification: TRANSFERASE/INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.978 Å
Deposited: 2021-07-29
Authors: Hruza, A., Strickland, C.L.
PDB entry 7rnj: S2P6 Fab fragment bound to the SARS-CoV/SARS-CoV-2 spike stem helix peptide
Classification: ANTIVIRAL PROTEIN, IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2021-07-29
Authors: Snell, G., Czudnochowski, N., Croll, T.I., Nix, J.C., Corti, D., Cameroni, E., Pinto, D., Beltramello, M., Sauer, M.M., Veesler, D.
PDB entry 7rnk: Room temperature X-ray structure of SARS-CoV-2 main protease (Mpro) in complex with HL-3-71
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-07-29
Authors: Kovalevsky, A., Kneller, D.W., Coates, L.
PDB entry 7rnl: Yeast CTP Synthase (Ura7) H360R Filament bound to Substrates
Classification: PROTEIN FIBRIL
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-07-29
Authors: Hansen, J.M., Lynch, E.M., Farrell, D.P., DiMaio, F., Quispe, J., Kollman, J.M.
PDB entry 7rnm: Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with 2-(2-Chloro-5-phenylthieno[2,3-d]pyrimidin-4-yl)isoindolin-5-ol and GRIP Peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-07-29
Authors: Joiner, C., Sammeta, V.K.R., Norris, J.D., McDonnell, D.P., Willson, T.M., Fanning, S.W.
PDB entry 7rnn: Human ASIC1a-Nb.C1 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2021-07-29
Authors: Wu, Y., Chen, Z., Sigworth, F.J., Canessa, C.M.
PDB entry 7rno: Model of the Ac-6-FP/hpMR1/bB2m/TAPBPR complex from integrated docking, NMR and restrained MD
Classification: IMMUNE SYSTEM
Source organism: Bos taurus; Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-07-29
Authors: McShan, A.C., Sgourakis, N.G.
PDB entry 7rnp: Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9_H275E with 4-Cl-Trp non-covalently bound
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-07-29
Authors: Higgins, P.M., Buller, A.R.
PDB entry 7rnq: Holo structure of engineered TrpB, 2B9-H275E, from Pyrococcus furiosus in the extended-open conformation
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2021-07-29
Authors: Higgins, P.M., Buller, A.R.
PDB entry 7rnr: Yeast CTP Synthase (Ura8) Bundle Bound to Substrates at Low pH
Classification: PROTEIN FIBRIL
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-07-29
Authors: Hansen, J.M., Lynch, E.M., Farrell, D.P., DiMaio, F., Quispe, J., Kollman, J.M.
PDB entry 7rns: nSH2 domain of p85-alpha subunit of phosphatidylinositol 3-kinase in complex with an actin peptide with phosphorylated tyrosine 53
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2021-07-29
Authors: Dai, S., Horton, J.R., Cheng, X.
PDB entry 7rnt: CRYSTAL STRUCTURE OF THE TYR45TRP MUTANT OF RIBONUCLEASE T1 IN A COMPLEX WITH 2'-ADENYLIC ACID
Classification: HYDROLASE(ENDORIBONUCLEASE)
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1991-08-20
Authors: Koellner, G., Grunert, H.-P., Landt, O., Saenger, W.
PDB entry 7rnu: nSH2 domain of p85-beta subunit of phosphatidylinositol 3-kinase in complex with an actin peptide with phosphorylated tyrosine 53
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-07-29
Authors: Dai, S., Horton, J.R., Cheng, X.
PDB entry 7rnv: SH2 domain of guanine nucleotide exchange factor Vav2 in complex with an actin peptide with phosphorylated tyrosine 53
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-07-29
Authors: Dai, S., Horton, J.R., Cheng, X.
PDB entry 7rnw: SARS-CoV-2 Main Protease in complex with a cyclic peptide inhibitor
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-07-30
Authors: Frkic, R.L., Jackson, C.J.
PDB entry 7rnx: CLC-ec1 at pH 7.5 100mM Cl Swap
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2021-07-30
Authors: Fortea, E., Boudker, O., Accardi, A.
PDB entry 7rny: Carbonic Anhydrase II in complex with 3-ureido benzenesulfonamide derivative
Classification: Lyase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2021-07-30
Authors: Combs, J., McKenna, R.
PDB entry 7rnz: Carbonic Anhydrase II in complex with 4-ureido benzenesulfonamide derivative
Classification: Lyase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-07-30
Authors: Combs, J., McKenna, R.
PDB entry 7ro0: CLC-ec1 at pH 7.5 100 mM NaGluconate Swap
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2021-07-30
Authors: Fortea, E., Boudker, O., Accardi, A.
PDB entry 7ro2: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 1
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.1 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7ro3: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 2
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7ro4: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 3
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7ro5: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 4
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7ro6: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 5
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7roa: Crystal structure of EntV136 from Enterococcus faecalis
Classification: ANTIFUNGAL PROTEIN
Source organism: Enterococcus faecalis OG1RF
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2021-07-30
Authors: Stogios, P.J., Evdokimova, E., Kim, Y., Garsin, D., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 7rob: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 6
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7roc: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 7
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7rod: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 8
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7roe: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 9
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7rof: Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9-H275E with L-Trp non-covalently bound
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-07-30
Authors: Higgins, P.M., Buller, A.R.
PDB entry 7rog: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 10
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7roh: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 11
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7roi: Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 12
Classification: VIRUS
Source organism: Sulfolobus monocaudavirus SMV1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2021-07-30
Authors: Wang, F., Cvirkaite-Krupovic, V., Krupovic, M., Egelman, E.H.
PDB entry 7roj: Amyloid-related segment of alphaB-crystallin residues 90-100 with G95W mutation
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-07-30
Authors: Sawaya, M.R., Do, T.D., Eisenberg, D.S.
PDB entry 7rol: Amyloid-related segment of alphaB-crystallin residues 90-100 with G95W mutation, bromo derivative
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.996 Å
Deposited: 2021-07-30
Authors: Sawaya, M.R., Do, T.D., Eisenberg, D.S.
PDB entry 7rom: Crystal structure of Saccharomyces cerevisiae NADH-cytochrome b5 reductase 1 (Cbr1) fragment (residues 28-284) bound to FAD
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-07-31
Authors: Fenwick, M.K., Zhang, Y., Lin, H.
PDB entry 7ron: Crystal structure of the Friedel-Crafts alkylating enzyme CylK from Cylindospermum licheniforme
Classification: TRANSFERASE
Source organism: Cylindrospermum licheniforme UTEX B 2014
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2021-07-31
Authors: Ruskoski, T.B., Boal, A.K.
PDB entry 7roo: Crystal structure of Friedel-Crafts alkylating enzyme CylK from Cylindospermum licheniforme with bromide
Classification: TRANSFERASE
Source organism: Cylindrospermum licheniforme UTEX B 2014
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2021-07-31
Authors: Ruskoski, T.B., Boal, A.K.
PDB entry 7roq: Alternative Structure of Human ABCA1
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-08-01
Authors: Aller, S.G.
PDB entry 7ror: Plasmodium falciparum tyrosyl-tRNA synthetase in complex with tyrosine-AMP
Classification: LIGASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-08-02
Authors: Metcalfe, R.D., Xie, S.C., Morton, C.J., Tilley, L., Griffin, M.D.W.
PDB entry 7ros: Plasmodium falciparum tyrosyl-tRNA synthetase in complex with ML901-Tyr
Classification: LIGASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-08-02
Authors: Metcalfe, R.D., Xie, S.C., Morton, C.J., Tilley, L., Griffin, M.D.W.
PDB entry 7rot: Plasmodium falciparum tyrosyl-tRNA synthetase, S234C mutant, in complex with ML901-Tyr
Classification: LIGASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-08-02
Authors: Metcalfe, R.D., Xie, S.C., Morton, C.J., Tilley, L., Griffin, M.D.W.
PDB entry 7rou: Structure of human tyrosyl tRNA synthetase in complex with ML901-Tyr
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-08-02
Authors: Metcalfe, R.D., Xie, S.C., Morton, C.J., Tilley, L., Griffin, M.D.W.
PDB entry 7rov: KRAS G12D Mutant in complex with GMPPCP and cyclic peptide MP-9903
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2021-08-02
Authors: Orth, P.
PDB entry 7rox: BthTX-I complexed with inhibitor MMV
Classification: TOXIN
Source organism: Bothrops jararacussu
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-08-02
Authors: Borges, R.J., De Marino, I., Uson, I., Fontes, M.R.M.
PDB entry 7roy: The structure of the Fem1B:FNIP1 complex
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-08-02
Authors: Gee, C.L., Mena, E.L., Manford, A.G., Rape, M.
PDB entry 7roz: Structure of RNA-dependent RNA polymerase 2 (RDR2) from Arabidopsis thaliana
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-02
Authors: Fukudome, A., Pikaard, C.S., Takagi, Y.
PDB entry 7rp0: Structural Snapshots of Intermediates in the Gating of a K+ Channel
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus; Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2021-08-02
Authors: Reddi, R., Matulef, K., Riederer, E.A., Valiyaveetil, F.I.
PDB entry 7rp2: Crystal structure of Kas G12C in complex with 2H11 CLAMP
Classification: Hydrolase/Immune System
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-08-03
Authors: Oh, A., Tam, C., Wang, W.
PDB entry 7rp3: Crystal structure of GNE-1952 alkylated KRAS G12C in complex with 2H11 CLAMP
Classification: Hydrolase/Immune System
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-08-03
Authors: Oh, A., Tam, C., Wang, W.
PDB entry 7rp4: Crystal structure of KRAS G12C in complex with GNE-1952
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-08-03
Authors: Oh, A., Tam, C., Wang, W.
PDB entry 7rp5: CLC-ec1 at pH 4.5 100mM Cl Turn
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2021-08-03
Authors: Fortea, E., Boudker, O., Accardi, A.
PDB entry 7rp6: CLC-ec1 at pH 4.5 100 mM NaGluconate Swap
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.78 Å
Deposited: 2021-08-03
Authors: Fortea, E., Boudker, O., Accardi, A.
PDB entry 7rp8: X-ray crystal structure of OXA-24/40 K84D in complex with imipenem
Classification: HYDROLASE/Inhibitor
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2021-08-03
Authors: Powers, R.A., Mitchell, J.M., June, C.M.
PDB entry 7rp9: X-ray crystal structure of OXA-24/40 V130D in complex with imipenem
Classification: HYDROLASE/Inhibitor
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2021-08-03
Authors: Powers, R.A., Mitchell, J.M., June, C.M.
PDB entry 7rpa: X-ray crystal structure of OXA-24/40 K84D in complex with meropenem
Classification: Hydrolase/Inhibitor
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2021-08-03
Authors: Powers, R.A., Mitchell, J.M., June, C.M.
PDB entry 7rpb: X-ray crystal structure of OXA-24/40 V130D in complex with meropenem
Classification: HYDROLASE/Inhibitor
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2021-08-03
Authors: Powers, R.A., Mitchell, J.M., June, C.M.
PDB entry 7rpc: X-ray crystal structure of OXA-24/40 K84D in complex with ertapenem
Classification: HYDROLASE/Inhibitor
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2021-08-03
Authors: Powers, R.A., Mitchell, J.M., June, C.M.
PDB entry 7rpd: X-ray crystal structure of OXA-24/40 V130D in complex with ertapenem
Classification: HYDROLASE/Inhibitor
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-08-03
Authors: Powers, R.A., Mitchell, J.M., June, C.M.
PDB entry 7rpe: X-ray crystal structure of OXA-24/40 in complex with ertapenem
Classification: HYDROLASE/Inhibitor
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2021-08-03
Authors: Powers, R.A., Mitchell, J.M., June, C.M.
PDB entry 7rpf: X-ray crystal structure of OXA-24/40 in complex with doripenem
Classification: HYDROLASE/Inhibitor
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-03
Authors: Powers, R.A., Mitchell, J.M., June, C.M.
PDB entry 7rpg: X-ray crystal structure of OXA-24/40 K84D in complex with cefotaxime
Classification: HYDROLASE/Inhibitor
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2021-08-03
Authors: Powers, R.A., Mitchell, J.M., June, C.M.
PDB entry 7rph: Cryo-EM structure of murine Dispatched 'R' conformation
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-08-03
Authors: Asarnow, D., Wang, Q., Ding, K., Cheng, Y., Beachy, P.A.
PDB entry 7rpi: Cryo-EM structure of murine Dispatched 'T' conformation
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-08-03
Authors: Asarnow, D., Wang, Q., Ding, K., Cheng, Y., Beachy, P.A.
PDB entry 7rpj: Cryo-EM structure of murine Dispatched NNN mutant
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-08-03
Authors: Asarnow, D., Wang, Q., Ding, K., Cheng, Y., Beachy, P.A.
PDB entry 7rpk: Cryo-EM structure of murine Dispatched in complex with Sonic hedgehog
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-08-03
Authors: Asarnow, D., Wang, Q., Ding, K., Cheng, Y., Beachy, P.A.
PDB entry 7rpm: Structures of the Intracellular Domain and Transmembrane Domain of the Human alpha7 Nicotinic Acetylcholine Receptors
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-08-03
Authors: Bondarenko, V., Chen, Q., Tang, P.
PDB entry 7rpn: Crystal structure of triosephosphate isomerase from Bacteroides thetaiotaomicron
Classification: ISOMERASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2021-08-03
Authors: Vickers, C.J., Fraga, D., Patrick, W.M.
PDB entry 7rpo: Archaeal DNA ligase and heterotrimeric PCNA in complex with non-ligatable DNA
Classification: LIGASE/DNA
Source organism: Saccharolobus solfataricus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.16 Å
Deposited: 2021-08-03
Authors: Sverzhinsky, A., Pascal, J.M.
PDB entry 7rpp: Crystal structure of human CEACAM1 with GFCC' and ABED face
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-08-04
Authors: Gandhi, A.K., Kim, W.M., Sun, Z.-Y., Huang, Y.H., Petsko, G.A., Blumberg, R.S.
PDB entry 7rpq: Crystal Structure of carboxyl-terminal processing protease A, CtpA, of Pseudomonas aeruginosa
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2021-08-04
Authors: Hsu, H.C., Li, H.
PDB entry 7rpr: Borrelia miyamotoi FbpA complement inhibitory domain
Classification: IMMUNE SYSTEM
Source organism: Borrelia miyamotoi FR64b
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-08-04
Authors: Booth, C.E., Garcia, B.L.
PDB entry 7rps: B. miyamotoi FbpB complement inhibitory domain
Classification: IMMUNE SYSTEM
Source organism: Borrelia miyamotoi FR64b
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2021-08-04
Authors: Booth, C.E., Garcia, B.L.
PDB entry 7rpt: Crystal Structure of Protective Human Antibody 3A6 Fab Against Ebola Virus
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-04
Authors: Salie, Z.L., Saphire, E.O., Davis, C.W., Ahmed, R.
PDB entry 7rpu: Crystal Structure of Protective Human Antibody 3A6 Fab Against Ebola Virus with GP Stalk/MPER Epitope Peptide
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2021-08-04
Authors: Salie, Z.L., Saphire, E.O., Davis, C.W., Ahmed, R.
PDB entry 7rpv: Crystal structure of affinity-enhancing and catalytically inactive ACE2 in complex with SARS-CoV-2 RBD
Classification: Hydrolase/Viral protein
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.54 Å
Deposited: 2021-08-04
Authors: Chen, Y., Tolbert, D.W., Pazgier, M.
PDB entry 7rpw: Archaeal DNA ligase and heterotrimeric PCNA in complex with adenylated DNA
Classification: LIGASE/DNA
Source organism: Saccharolobus solfataricus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.38 Å
Deposited: 2021-08-04
Authors: Sverzhinsky, A., Pascal, J.M.
PDB entry 7rpx: Archaeal DNA ligase and heterotrimeric PCNA in complex with end-joined DNA
Classification: LIGASE/DNA
Source organism: Saccharolobus solfataricus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2021-08-04
Authors: Sverzhinsky, A., Pascal, J.M.
PDB entry 7rpy: X25-2 domain of Sca5 from Ruminococcus bromii
Classification: SUGAR BINDING PROTEIN
Source organism: Ruminococcus bromii L2-63
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2021-08-04
Authors: Cerqueira, F., Koropatkin, N.
PDB entry 7rpz: KRAS G12D in complex with MRTX-1133
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-08-05
Authors: Gunn, R.J., Thomas, N.C., Xiaolun, W., Lawson, J.D., Marx, M.A.
PDB entry 7rq0: HIV Integrase CORE domain in complex with 2-{2-[2-(3-{[4-(2-{[(3-{2-[3-(carboxymethyl)-5-methyl-1-benzofuran-2-yl]ethynyl}phenyl)methyl]amino}ethyl)piperazin-1-yl]methyl}phenyl)ethynyl]-5-methyl-1-benzofuran-3-yl}acetic acid
Classification: TRANSFERASE/INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-08-05
Authors: Gorman, M.A., Parker, M.W.
PDB entry 7rq5: Hairpin near 3'-Splice Site of Influenza A Segment 7 Bound to 5-nt Oligonucleotide
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2021-08-05
Authors: Kauffmann, A.D., Kennedy, S.D., Turner, D.H.
PDB entry 7rq6: Cryo-EM structure of SARS-CoV-2 spike in complex with non-neutralizing NTD-directed CV3-13 Fab isolated from convalescent individual
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.18 Å
Deposited: 2021-08-05
Authors: Chen, Y., Pozharski, E., Tolbert, W.D., Pazgier, M.
PDB entry 7rq7: CLC-ec1 at pH 4.5 100mM Cl TWIST2
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2021-08-05
Authors: Fortea, E., Boudker, O., Accardi, A.
PDB entry 7rq8: Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution
Classification: RIBOSOME/RNA
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-06
Authors: Mitcheltree, M.J., Pisipati, A., Syroegin, E.A., Silvestre, K.J., Klepacki, D., Mason, J.D., Terwilliger, D.W., Testolin, G., Pote, A.R., Wu, K.J.Y., Ladley, R.P., Chatman, K., Mankin, A.S., Polikanov, Y.S., Myers, A.G.
PDB entry 7rq9: Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution
Classification: Ribosome/RNA
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-08-06
Authors: Mitcheltree, M.J., Pisipati, A., Syroegin, E.A., Silvestre, K.J., Klepacki, D., Mason, J.D., Terwilliger, D.W., Testolin, G., Pote, A.R., Wu, K.J.Y., Ladley, R.P., Chatman, K., Mankin, A.S., Polikanov, Y.S., Myers, A.G.
PDB entry 7rqa: Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MTI-tripeptidyl-tRNA analog ACCA-ITM at 2.40A resolution
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-08-06
Authors: Syroegin, E.A., Flemmich, L., Klepacki, D., Vazquez-Laslop, N., Micura, R., Polikanov, Y.S.
PDB entry 7rqb: Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-08-06
Authors: Syroegin, E.A., Flemmich, L., Klepacki, D., Vazquez-Laslop, N., Micura, R., Polikanov, Y.S.
PDB entry 7rqc: Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-06
Authors: Syroegin, E.A., Flemmich, L., Klepacki, D., Vazquez-Laslop, N., Micura, R., Polikanov, Y.S.
PDB entry 7rqd: Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-08-06
Authors: Syroegin, E.A., Flemmich, L., Klepacki, D., Vazquez-Laslop, N., Micura, R., Polikanov, Y.S.
PDB entry 7rqe: Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolution
Classification: RIBOSOME
Source organism: Escherichia coli K-12; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-08-06
Authors: Syroegin, E.A., Flemmich, L., Klepacki, D., Vazquez-Laslop, N., Micura, R., Polikanov, Y.S.
PDB entry 7rqf: Crystal Structure of LbcA (lipoprotein binding partner of CtpA) of Pseudomonas aeruginosa
Classification: PROTEIN BINDING
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2021-08-06
Authors: Hsu, H.C., Li, H.
PDB entry 7rqg: Crystal structure of the Nsp3 Y3 domain from SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2021-08-06
Authors: Stogios, P.J., Skarina, T., Chang, C., Di Leo, R., Savchenko, A., Joachimiak, A., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7rqh: Crystal Structure of carboxyl-terminal processing protease A mutant S302A, CtpA_S302A, of Pseudomonas aeruginosa
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-08-06
Authors: Hsu, H.C., Li, H.
PDB entry 7rqp: Structure of PfCSP NPNV binding antibody L9
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2021-08-06
Authors: Hurlburt, N.K., Pancera, M.
PDB entry 7rqq: Structure of chimeric antibody F10heavy_L9light with PfCSP peptide NANPNVDP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2021-08-06
Authors: Hurlburt, N.K., Pancera, M.
PDB entry 7rqr: Structure of chimeric antibody L9heavy_F10light with PfCSP peptide NANPNVDP
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2021-08-06
Authors: Hurlburt, N.K., Pancera, M.
PDB entry 7rqs: Arabidopsis RNA-dependent RNA polymerase 2
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2021-08-07
Authors: Fukudome, A., Pikaard, C.S., Takagi, Y.
PDB entry 7rqt: THE B-DNA DODECAMER With HIGH RESOLUTION
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2021-08-08
Authors: Chen, C., Huang, Z.
PDB entry 7rqu: Cryo-EM structure of the full-length TRPV1 with RTx at 4 degrees Celsius, in a closed state, class I
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2021-08-08
Authors: Kwon, D.H., Suo, Y., Lee, S.-Y.
PDB entry 7rqv: Cryo-EM structure of the full-length TRPV1 with RTx at 4 degrees Celsius, in an intermediate-closed state, class II
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2021-08-08
Authors: Kwon, D.H., Suo, Y., Lee, S.-Y.
PDB entry 7rqw: Cryo-EM structure of the full-length TRPV1 with RTx at 4 degrees Celsius, in an open state, class III
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2021-08-08
Authors: Kwon, D.H., Suo, Y., Lee, S.-Y.
PDB entry 7rqx: Cryo-EM structure of the full-length TRPV1 with RTx at 25 degrees Celsius, in an intermediate-open state, class A
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2021-08-08
Authors: Kwon, D.H., Suo, Y., Lee, S.-Y.
PDB entry 7rqy: Cryo-EM structure of the full-length TRPV1 with RTx at 25 degrees Celsius, in an open state, class B
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2021-08-08
Authors: Kwon, D.H., Suo, Y., Lee, S.-Y.
PDB entry 7rqz: Cryo-EM structure of the full-length TRPV1 with RTx at 48 degrees Celsius, in an open state, class alpha
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2021-08-08
Authors: Kwon, D.H., Suo, Y., Lee, S.-Y.
PDB entry 7rr0: SARS-CoV-2 receptor binding domain bound to Fab PDI 222
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2021-08-08
Authors: Pymm, P., Glukhova, A., Black, K.A., Tham, W.H.
PDB entry 7rr3: Structure of Deep-Sea Phage NrS-1 Primase-Polymerase N300 in complex with calcium and ddCTP
Classification: REPLICATION
Source organism: Nitratiruptor phage NrS-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2021-08-09
Authors: Wang, L., Yu, C., Sliz, P.
PDB entry 7rr4: Structure of Deep-Sea Phage NrS-1 Primase-Polymerase N300 in complex with magnesium and pyrophosphate
Classification: REPLICATION
Source organism: Nitratiruptor phage NrS-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2021-08-09
Authors: Wang, L., Yu, C., Sliz, P.
PDB entry 7rr5: Structure of ribosomal complex bound with Rbg1/Tma46
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2021-08-09
Authors: Zeng, F., Li, X., Pires-Alves, M., Chen, X., Hawk, C.W., Jin, H.
PDB entry 7rr6: Multidrug efflux pump subunit AcrB
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-08-09
Authors: Trinh, T.K.H., Cabezas, A., Catalano, C., Qiu, W., des Georges, A., Guo, Y.
PDB entry 7rr7: Multidrug efflux pump subunit AcrB
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2021-08-09
Authors: Trinh, T.K.H., Cabezas, A., Catalano, C., Qiu, W., des Georges, A., Guo, Y.
PDB entry 7rr8: Multidrug efflux pump subunit AcrB
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2021-08-09
Authors: Trinh, T.K.H., Cabezas, A., Catalano, C., Qiu, W., des Georges, A., Guo, Y.
PDB entry 7rr9: Cryo-EM Structure of Nanodisc reconstituted ABCD1 in nucleotide bound outward open conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-08-09
Authors: Alam, A., Le, L.T.M., Thompson, J.R.
PDB entry 7rra: Cryo-EM Structure of Nanodisc reconstituted ABCD1 in inward open conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2021-08-09
Authors: Alam, A., Le, L.T.M., Thompson, J.R.
PDB entry 7rrb: IDO1 IN COMPLEX WITH COMPOUND 9
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2021-08-09
Authors: Lesburg, C.A.
PDB entry 7rrc: IDO1 IN COMPLEX WITH COMPOUND 14
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2021-08-09
Authors: Lesburg, C.A.
PDB entry 7rrd: IDO1 IN COMPLEX WITH COMPOUND S-1
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2021-08-09
Authors: Lesburg, C.A.
PDB entry 7rre: Carbonic Anhydrase II in complex with Beta-Galactose-2C
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2021-08-09
Authors: McKenna, R., Combs, J.E.
PDB entry 7rrf: Carbonic Anhydrase IX-mimic in complex with Beta-Galactose_2C
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-08-09
Authors: Combs, J.E., McKenna, R.
PDB entry 7rrg: Crystal structure of human 0606T1-2 TCR bound to HLA-A*03:01 in complex with a mutant PIK3CA peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2021-08-09
Authors: Ma, J., Baker, B.M.
PDB entry 7rrh: Crystal structure of fast switching R66M/M159T mutant of fluorescent protein Dronpa (Dronpa2)
Classification: FLUORESCENT PROTEIN
Source organism: Echinophyllia sp. SC22
Experimental method: X-RAY DIFFRACTION
Resolution: 1.747 Å
Deposited: 2021-08-09
Authors: Lin, C.-Y., Romei, M.G., Mathews, I.I., Boxer, S.G.
PDB entry 7rri: Crystal structure of fast switching S142A/M159T mutant of fluorescent protein Dronpa (Dronpa2)
Classification: FLUORESCENT PROTEIN
Source organism: Echinophyllia sp. SC22
Experimental method: X-RAY DIFFRACTION
Resolution: 2.643 Å
Deposited: 2021-08-09
Authors: Lin, C.-Y., Romei, M.G., Mathews, I.I., Boxer, S.G.
PDB entry 7rrj: Crystal structure of fast switching M159Q mutant of fluorescent protein Dronpa (Dronpa2)
Classification: FLUORESCENT PROTEIN
Source organism: Echinophyllia sp. SC22
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-08-09
Authors: Lin, C.-Y., Romei, M.G., Mathews, I.I., Boxer, S.G.
PDB entry 7rrk: Crystal structure of fast switching M159E mutant of fluorescent protein Dronpa (Dronpa2)
Classification: FLUORESCENT PROTEIN
Source organism: Echinophyllia sp. SC22
Experimental method: X-RAY DIFFRACTION
Resolution: 1.929 Å
Deposited: 2021-08-09
Authors: Lin, C.-Y., Romei, M.G., Mathews, I.I., Boxer, S.G.
PDB entry 7rrl: Alternate Crystal Form of Human Malate Dehydrogenase I
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-08-09
Authors: McCue, W., Finzel, B.C.
PDB entry 7rrm: Structure of the human TMED1 (p24gamma1) Golgi dynamics Domain
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2021-08-10
Authors: Mota, D.C.A.M., Cardoso, I.A., Mori, R.M., Mendes, L.F.S., Nonato, M.C., Filho, A.J.C.
PDB entry 7rrn: E. coli cysteine desulfurase SufS R56A
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-08-10
Authors: Dunkle, J.A., Gogar, R., Frantom, P.A.
PDB entry 7rro: Structure of the 48-nm repeat doublet microtubule from bovine tracheal cilia
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-08-10
Authors: Gui, M., Anderson, J.R., Botsch, J.J., Meleppattu, S., Singh, S.K., Zhang, Q., Brown, A.
PDB entry 7rrp: Apoferritin structure at 1.27 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with Falcon4 detector
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.27 Å
Deposited: 2021-08-10
Authors: Pintilie, G., Zhang, K., Chiu, W.
PDB entry 7rrw: Monomeric CRM197 expressed in E. coli
Classification: TOXIN
Source organism: Corynebacterium diphtheriae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-08-10
Authors: Gallagher, D.T., Lees, A.
PDB entry 7rrx: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-19
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2021-08-10
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rry: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-20
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2021-08-10
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rrz: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-30
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2021-08-10
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rs0: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-18
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2021-08-10
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rs1: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-21
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2021-08-10
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.
PDB entry 7rs2: Crystal Structure of the ER-alpha Ligand-binding Domain (L372S, L536S) in complex with DMERI-23
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2021-08-10
Authors: Min, J., Nwachukwu, J.C., Min, C.K., Njeri, J.W., Srinivasan, S., Rangarajan, E.S., Nettles, C.C., Yan, S., Houtman, R., Griffin, P.R., Izard, T., Katzenellenbogen, B.S., Katzenellenbogen, J.A., Nettles, K.W.