LiteFold/PDB huggingface dataset:
PDB entry 6v8x: VRC01 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2019-12-12
Authors: Henderson, R., Acharya, P.
PDB entry 6v8y: Structure of a Sodium Potassium ion Channel
Classification: MEMBRANE PROTEIN
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2019-12-12
Authors: Roy, R., Weiss, K.L., Coates, L.
PDB entry 6v8z: VRC03 and 10-1074 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-12-12
Authors: Henderson, R., Acharya, P.
PDB entry 6v90: Crystal structure of the p300 acetyltransferase domain with AcCoA competitive inhibitor 12
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2019-12-12
Authors: Gardberg, A.S.
PDB entry 6v91: Crystal structure of Stringent starvation protein A (BTH_I2974) from Burkholderia thailandensis
Classification: STRUCTURAL GENOMICS
Source organism: Burkholderia thailandensis E264
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-12-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6v92: RSC-NCP
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 20 Å
Deposited: 2019-12-13
Authors: Patel, A.B., Moore, C.M., Greber, B.J., Nogales, E.
PDB entry 6v93: Structure of DNA Polymerase Zeta/DNA/dNTP Ternary Complex
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-12-13
Authors: Malik, R., Kopylov, M., Jain, R., Ubarrextena-Belandia, I., Aggarwal, A.K.
PDB entry 6v94: Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-12-13
Authors: Phan, J., Fesik, S.W.
PDB entry 6v95: Peanut lectin complexed with divalent N-beta-D-galactopyranosyl-L-tartaramidoyl derivative (diNGT)
Classification: SUGAR BINDING PROTEIN
Source organism: Arachis hypogaea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2019-12-13
Authors: Otero, L.H., Primo, E.D., Cagnoni, A.J., Klinke, S., Goldbaum, F.A., Uhrig, M.L.
PDB entry 6v96: Agrobacterium tumefaciens ADP-Glucose pyrophosphorylase-S72E
Classification: TRANSFERASE
Source organism: Agrobacterium fabrum (strain C58 / ATCC 33970)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-12-13
Authors: Zheng, Y., Hussien, R., Alghamdi, M.A., Ballicora, M.A., Liu, D.
PDB entry 6v97: Kindlin-3 double deletion mutant short form
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.381 Å
Deposited: 2019-12-13
Authors: Xu, Z., Zhang, T.L., Xu, Z., Sun, J.J., Ding, J.P., Ma, Y.Q.
PDB entry 6v98: Crystal structure of Type VI secretion system effector, TseH (VCA0285)
Classification: HYDROLASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-12-13
Authors: Watanabe, N., Hersch, S.J., Dong, T.G., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6v99: Agrobacterium tumefaciens ADP-Glucose pyrophosphorylase- S72D in the presence of sulfate
Classification: TRANSFERASE
Source organism: Agrobacterium fabrum (strain C58 / ATCC 33970)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.287 Å
Deposited: 2019-12-13
Authors: Zheng, Y., Alghamdi, M.A., Ballicora, M.A., Liu, D.
PDB entry 6v9a: Agrobacterium tumefaciens ADP-Glucose pyrophosphorylase-S72D
Classification: TRANSFERASE
Source organism: Agrobacterium fabrum (strain C58 / ATCC 33970)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-12-13
Authors: Zheng, Y., Alghamdi, M.A., Ballicora, M.A., Liu, D.
PDB entry 6v9b: Co-crystal structure of the fluorogenic Mango-IV homodimer bound to TO1-Biotin
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-12-13
Authors: Trachman, R.J., Ferre-D'Amare, A.R.
PDB entry 6v9c: Crystal structure of FGFR4 kinase domain in complex with covalent inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-12-13
Authors: Liu, J., Liu, H.
PDB entry 6v9d: Co-crystal structure of the fluorogenic Mango-IV homodimer bound to TO1-Biotin
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-12-13
Authors: Trachman, R.J., Ferre-D'Amare, A.R.
PDB entry 6v9e: The crystal structure of the 2009 H1N1 PA endonuclease wild type in complex with SJ000988632
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Luxembourg/43/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-12-13
Authors: Cuypers, M.G., Slavish, P.J., Rankovic, Z., White, S.W.
PDB entry 6v9f: Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.849 Å
Deposited: 2019-12-13
Authors: Phan, J., Fesik, S.W.
PDB entry 6v9g: Kindlin-3 double deletion mutant long form
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-12-13
Authors: Xu, Z., Zhang, T.L., Xu, Z., Sun, J.J., Ding, J.P., Ma, Y.Q.
PDB entry 6v9h: Ankyrin repeat and SOCS-box protein 9 (ASB9), ElonginB (ELOB), and ElonginC (ELOC) bound to its substrate Brain-type Creatine Kinase (CKB)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2019-12-13
Authors: Komives, E.A., Lumpkin, R.J., Baker, R.W., Leschziner, A.E.
PDB entry 6v9i: cryo-EM structure of Cullin5 bound to RING-box protein 2 (Cul5-Rbx2)
Classification: LIGASE
Source organism: Homo sapiens; Mus musculus; Streptococcus sp. group G
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2019-12-13
Authors: Komives, E.A., Lumpkin, R.J., Baker, R.W., Leschziner, A.E.
PDB entry 6v9j: Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2019-12-13
Authors: Phan, J., Fesik, S.W.
PDB entry 6v9k: CRYSTAL STRUCTURE OF THE HYBRID C-TERMINAL DOMAIN OF ENZYME I OF THE BACTERIAL PHOSPHOTRANSFERASE SYSTEM FORMED BY HYBRIDIZING THE SCAFFOLD OF THE ESCHERICHIA COLI ENZYME WITH THE ACTIVE SITE LOOPS FROM THE THERMOANAEROBACTER TENGCONGENSIS ENZYME
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-12-13
Authors: Stewart Jr., C.E.
PDB entry 6v9l: Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2019-12-13
Authors: Phan, J., Fesik, S.W.
PDB entry 6v9m: Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.648 Å
Deposited: 2019-12-13
Authors: Phan, J., Fesik, S.W.
PDB entry 6v9n: Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.648 Å
Deposited: 2019-12-13
Authors: Phan, J., Fesik, S.W.
PDB entry 6v9o: Expanding the Chemical Landscape of SOS1 Activators Using Fragment Based Methods
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2019-12-13
Authors: Phan, J., Fesik, S.W.
PDB entry 6v9p: Crystal structure of the transposition protein TniQ
Classification: IMMUNE SYSTEM
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2019-12-14
Authors: Jia, N., Patel, D.J.
PDB entry 6v9q: Cryo-EM structure of Cascade-TniQ binary complex
Classification: IMMUNE SYSTEM
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2019-12-15
Authors: Jia, N., Patel, D.J.
PDB entry 6v9s: Structure-based development of subtype-selective orexin 1 receptor antagonists
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Pyrococcus abyssi (strain GE5 / Orsay)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2019-12-16
Authors: Hellmann, J., Drabek, M., Yin, J., Huebner, H., Kraus, F., Proell, T., Weikert, D., Kolb, P., Rosenbaum, D.M., Gmeiner, P.
PDB entry 6v9t: Tudor domain of TDRD3 in complex with a small molecule
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.154 Å
Deposited: 2019-12-16
Authors: Li, W., Tempel, W., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6v9u: Crystal structure of human TLR8 ectodomain bound to small molecule antagonist 14c
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2019-12-16
Authors: Critton, D.A.
PDB entry 6v9v: Structure of TRPA1 modified by Bodipy-iodoacetamide with bound calcium, LMNG
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2019-12-16
Authors: Zhao, J., Lin King, J.V., Paulsen, C.E., Cheng, Y., Julius, D.
PDB entry 6v9w: Structure of TRPA1 (ligand-free) with bound calcium, LMNG
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-12-16
Authors: Zhao, J., Lin King, J.V., Paulsen, C.E., Cheng, Y., Julius, D.
PDB entry 6v9x: Structure of TRPA1 modified by iodoacetamide, PMAL-C8
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-12-16
Authors: Zhao, J., Lin King, J.V., Paulsen, C.E., Cheng, Y., Julius, D.
PDB entry 6v9y: Structure of TRPA1 bound with A-967079, PMAL-C8
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2019-12-16
Authors: Zhao, J., Lin King, J.V., Paulsen, C.E., Cheng, Y., Julius, D.
PDB entry 6v9z: Cryo-EM structure of PCAT1 bound to its CtA peptide substrate
Classification: PROTEIN TRANSPORT
Source organism: Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2019-12-16
Authors: Kieuvongngam, V., Oldham, M.L., Chen, J.
PDB entry 6va0: Crystal structure of glucose-6-phosphate dehydrogenase W509A mutant in complex with catalytic NADP+
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2019-12-16
Authors: Horikoshi, N., Mochly-Rosen, D., Wakatsuki, S.
PDB entry 6va1: Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2019-12-16
Authors: Chen, J.L., Fountain, M.A., Disney, M.D.
PDB entry 6va2: Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MH5
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2019-12-16
Authors: Chen, J.L., Fountain, M.A., Disney, M.D.
PDB entry 6va3: Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MQC
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2019-12-16
Authors: Chen, J.L., Fountain, M.A., Disney, M.D.
PDB entry 6va4: Solution Structure of the Tau pre-mRNA Exon 10 Splicing Regulatory Element Bound to MIP
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2019-12-16
Authors: Chen, J.L., Fountain, M.A., Disney, M.D.
PDB entry 6va5: Tudor Domain of Tumor suppressor p53BP1 with MFP-4184
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2019-12-16
Authors: Zeng, H., Dong, A., Headey, S., Gunzburg, M., Doak, B., James, L.I., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Brown, P.J., Structural Genomics Consortium (SGC)
PDB entry 6va7: Crystal structure of glucose-6-phosphate dehydrogenase P396L mutant in complex with catalytic NADP+
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2019-12-17
Authors: Horikoshi, N., Mochly-Rosen, D., Wakatsuki, S.
PDB entry 6va8: Crystal structure of glucose-6-phosphate dehydrogenase F381L mutant in complex with catalytic NADP+
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.95 Å
Deposited: 2019-12-17
Authors: Horikoshi, N., Mochly-Rosen, D., Wakatsuki, S.
PDB entry 6va9: Crystal structure of glucose-6-phosphate dehydrogenase R393H mutant in complex with catalytic NADP+
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.95 Å
Deposited: 2019-12-17
Authors: Horikoshi, N., Mochly-Rosen, D., Wakatsuki, S.
PDB entry 6vaa: Structure of the Fanconi Anemia ID complex bound to ICL DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-12-17
Authors: Pavletich, N.P.
PDB entry 6vab: Mouse retromer sub-structure: VPS35/VPS35 flat dimer
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2019-12-17
Authors: Kendall, A.K., Jackson, L.P.
PDB entry 6vac: Mouse retromer (VPS26/VPS35/VPS29) heterotrimer
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.7 Å
Deposited: 2019-12-17
Authors: Kendall, A.K., Jackson, L.P.
PDB entry 6vad: Fanconi Anemia ID complex
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-12-17
Authors: Pavletich, N.P.
PDB entry 6vae: Mono-ubiquitinated Fanconi Anemia ID complex bound to ICL DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2019-12-17
Authors: Pavletich, N.P.
PDB entry 6vaf: Structure of mono-ubiquitinated FANCD2 bound to non-ubiquitinated FANCI and to DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-12-17
Authors: Pavletich, N.P.
PDB entry 6vag: Crystal structure of the oligomerization domain of phosphoprotein from parainfluenza virus 5
Classification: VIRAL PROTEIN
Source organism: Parainfluenza virus 5 (strain W3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2019-12-17
Authors: Aggarwal, M., Abdella, R., He, Y., Lamb, R.A.
PDB entry 6vah: Crystal structure of human TEAD2 transcription factor in complex with Flufenamic acid derivative
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2019-12-17
Authors: Halabelian, L., Zeng, H., Dong, A., Li, Y., Melin, L., Gagnon, A., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Santhakumar, V., Structural Genomics Consortium (SGC)
PDB entry 6vai: Cryo-EM structure of a dimer of undecameric human CALHM2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2019-12-17
Authors: Syrjanen, J.L., Chou, T.H., Furukawa, H.
PDB entry 6vaj: Crystal Structure Analysis of human PIN1
Classification: ISOMERASE/ISOMERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2019-12-17
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 6vak: Cryo-EM structure of human CALHM2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2019-12-17
Authors: Syrjanen, J.L., Chou, T.H., Furukawa, H.
PDB entry 6val: Cryo-EM structure of an undecameric chicken CALHM1 and human CALHM2 chimera
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Gallus gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2019-12-17
Authors: Syrjanen, J.L., Chou, T.H., Furukawa, H.
PDB entry 6vam: Cryo-EM structure of octameric chicken CALHM1
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.63 Å
Deposited: 2019-12-17
Authors: Syrjanen, J.L., Chou, T.H., Furukawa, H.
PDB entry 6van: Crystal structure of caltubin from the great pond snail
Classification: METAL BINDING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2019-12-17
Authors: Dong, A., Li, A., Zhang, Q., Barszczyk, A., Chern, Y.H., Arrowsmith, C.H., Edwards, A.M., Zhong, Z.P., Tong, Y., Structural Genomics Consortium (SGC)
PDB entry 6vao: Human cofilin-1 decorated actin filament
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-12-17
Authors: Huehn, A.R., Bibeau, J.P., Schramm, A.C., Cao, W., De La Cruz, E.M., Sindelar, C.V.
PDB entry 6vap: Structure of the type II thioesterase BorB from the borrelidin biosynthetic cluster
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces sp. WAC02707
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2019-12-17
Authors: Pereira, J.H., Curran, S.C., Baluyot, M.-J., Lake, J., Putz, H., Rosenburg, D., Keasling, J., Adams, P.D.
PDB entry 6vaq: Crystal structure of glucose-6-phosphate dehydrogenase V394L mutant in complex with catalytic NADP+
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2019-12-17
Authors: Horikoshi, N., Mochly-Rosen, D., Wakatsuki, S.
PDB entry 6var: 61 nt human Hepatitis B virus epsilon pre-genomic RNA
Classification: RNA
Experimental method: SOLUTION NMR, SOLUTION SCATTERING
Deposited: 2019-12-17
Authors: LeBlanc, R.M., Kasprzak, W.K., Longhini, A.P., Abulwerdi, F., Ginocchio, S., Shields, B., Nyman, J., Svirydava, M., Del Vecchio, C., Ivanic, J., Schneekloth, J.S., Dayie, T.K., Shapiro, B.A., Le Grice, S.F.J.
PDB entry 6vas: Assembly of VIQKI I454(beta-L-homoisoleucine)with human parainfluenza virus type 3 (HPIV3) fusion glycoprotein N-terminal heptad repeat domain
Classification: VIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2019-12-17
Authors: Outlaw, V.K., Gellman, S.H.
PDB entry 6vat: Structure of the periplasmic domain of YejM from Salmonella typhimurium
Classification: Hydrolase, Transport protein
Source organism: Salmonella enterica subsp. enterica serovar
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-12-17
Authors: Gabale, U., Ressl, S.
PDB entry 6vau: Bare actin filament from a partially cofilin-decorated sample
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2019-12-17
Authors: Huehn, A.R., Bibeau, J.P., Schramm, A.C., Cao, W., De La Cruz, E.M., Sindelar, C.V.
PDB entry 6vav: Peanut lectin complexed with divalent N-beta-D-galactopyranosyl-L-succinamoyl derivative (diNGS)
Classification: SUGAR BINDING PROTEIN
Source organism: Arachis hypogaea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-12-18
Authors: Otero, L.H., Primo, E.D., Cagnoni, A.J., Klinke, S., Goldbaum, F.A., Uhrig, M.L.
PDB entry 6vaw: Peanut lectin complexed with N-beta-D-galactopyranosyl-L-succinamoyl derivative (NGS)
Classification: SUGAR BINDING PROTEIN
Source organism: Arachis hypogaea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-12-18
Authors: Otero, L.H., Primo, E.D., Cagnoni, A.J., Klinke, S., Goldbaum, F.A., Uhrig, M.L.
PDB entry 6vax: Crystal structure of human SDHA-SDHAF2 assembly intermediate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2019-12-18
Authors: Sharma, P., Maklashina, E., Cecchini, G., Iverson, T.M.
PDB entry 6vb0: HLA-B*15:02 complexed with a synthetic peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-12-18
Authors: Schutte, R.J., Li, D., Ostrov, D.A.
PDB entry 6vb1: HLA-B*15:02 complexed with a synthetic peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-12-18
Authors: Schutte, R.J., Li, D., Andring, J., McKenna, R., Ostrov, D.A.
PDB entry 6vb2: HLA-B*15:02 complexed with a synthetic peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2019-12-18
Authors: Schutte, R.J., Li, D., Ostrov, D.A.
PDB entry 6vb3: HLA-B*15:01 complexed with a synthetic peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-12-18
Authors: Schutte, R.J., Li, D., Ostrov, D.A.
PDB entry 6vb4: HLA-B*15:02 complexed with a synthetic peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.334 Å
Deposited: 2019-12-18
Authors: Schutte, R.J., Li, D., Andring, J., McKenna, R., Ostrov, D.A.
PDB entry 6vb5: HLA-B*15:02 complexed with a synthetic peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-12-18
Authors: Schutte, R.J., Li, D., Ostrov, D.A.
PDB entry 6vb6: HLA-B*15:02 complexed with a synthetic peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-12-18
Authors: Schutte, R.J., Li, D., Ostrov, D.A.
PDB entry 6vb7: HLA-B*15:02 complexed with a synthetic peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-12-18
Authors: Schutte, R.J., Li, D., Ostrov, D.A.
PDB entry 6vb8: Crystal structure of a lectin from Canavalia brasiliensis seed (ConBr) complexed with indole-3-acetic acid
Classification: SUGAR BINDING PROTEIN
Source organism: Canavalia brasiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-12-18
Authors: Bezerra, E.H.S., Queiroz, P.P., da Silva, F.M.S., Girao, M.S., Sales, M.V., Paiva, C.P.S., Freire, V.N., Rocha, B.A.M.
PDB entry 6vb9: Covalent adduct of cis-2,3-epoxysuccinic acid with Isocitrate Lyase-1 from Mycobacterium tuberculosis
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.881 Å
Deposited: 2019-12-18
Authors: Krieger, I.V., Pham, T.V., Meek, T.D., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 6vba: Structure of human Uracil DNA Glycosylase (UDG) bound to Aurintricarboxylic acid (ATA)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-12-18
Authors: Moiani, D., Arvai, A.S., Tainer, J.A.
PDB entry 6vbb: 2.60 Angstrom Resolution Crystal Structure of Peptidase S41 from Acinetobacter baumannii
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-12-18
Authors: Minasov, G., Wawrzak, Z., Shuvalova, L., Kiryukhina, O., Dubrovska, I., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6vbc: Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae cephalosporin-resistant strain H041
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2019-12-18
Authors: Singh, A., Davies, C.
PDB entry 6vbd: Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae cephalosporin-resistant strain H041 acylated by ceftriaxone
Classification: HYDROLASE/ANTIBIOTIC
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-12-18
Authors: Singh, A., Davies, C.
PDB entry 6vbe: Crystal structure of recombinant mutant H180R of human fumarase
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.899 Å
Deposited: 2019-12-18
Authors: Ajalla, M.A.A., Nonato, M.C.
PDB entry 6vbf: 1.85 Angstrom Resolution Crystal Structure of N-terminal Domain of Two-component System Response Regulator from Acinetobacter baumannii
Classification: TRANSCRIPTION
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-12-18
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Wiersum, G., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6vbg: Lactose permease complex with thiodigalactoside and nanobody 9043
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-12-18
Authors: Kumar, H., Stroud, R.M., Kaback, H.R., Finer-Moore, J., Smirnova, I., Kasho, V., Pardon, E., Steyart, J.
PDB entry 6vbh: Human XPG endonuclease catalytic domain
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.995 Å
Deposited: 2019-12-18
Authors: Tsutakawa, S.E., Arvai, A.S., Tainer, J.A.
PDB entry 6vbi: crystal structure of PDE5 in complex with a non-competitive inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.30001 Å
Deposited: 2019-12-18
Authors: Ke, H., Luo, H.B.
PDB entry 6vbj: CRYSTAL STRUCTURE OF THE HYBRID C-TERMINAL DOMAIN OF ENZYME I OF THE BACTERIAL PHOSPHOTRANSFERASE SYSTEM FORMED BY HYBRIDIZING THE SCAFFOLD OF THE THERMOANAEROBACTER TENGCONGENSIS ENZYME WITH THE ACTIVE SITE LOOPS FROM THE ESCHERICHIA COLI ENZYME
Classification: TRANSFERASE
Source organism: Caldanaerobacter subterraneus subsp. tengcongensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-12-19
Authors: Stewart Jr., C.E.
PDB entry 6vbk: Crystal structure of N-terminal domain of Mycobacterium tuberculosis complex Lon protease
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-12-19
Authors: Bi, F.K., Chen, C., Chen, X.Y., Guo, C.Y., Lin, D.H.
PDB entry 6vbl: Crystal structure of the transpeptidase domain of PBP2 from the Neisseria gonorrhoeae cephalosporin decreased susceptibility strain 35/02
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2019-12-19
Authors: Singh, A., Davies, C.
PDB entry 6vbm: Crystal structure of a S310A mutant of PBP2 from Neisseria gonorrhoeae
Classification: HYDROLASE
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2019-12-19
Authors: Singh, A., Davies, C.
PDB entry 6vbn: Crystal Structure of hTDO2 bound to inhibitor GNE1
Classification: OXIDOREDUCTASE/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å
Deposited: 2019-12-19
Authors: Harris, S.F., Oh, A.
PDB entry 6vbo: Crystal structure of anti-HIV-1 antibody DH813 bound to gp120 V2 peptide
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.683 Å
Deposited: 2019-12-19
Authors: Janus, B.M., Ofek, G.
PDB entry 6vbp: Crystal structure of anti-HIV-1 antibody DH815 bound to gp120 V2 peptide
Classification: IMMUNE SYSTEM/Viral Protein
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.298 Å
Deposited: 2019-12-19
Authors: Janus, B.M., Ofek, G.
PDB entry 6vbq: Crystal structure of anti-HIV-1 antibody DH822 bound to gp120 V2 peptide
Classification: IMMUNE SYSTEM/Viral Protein
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.116 Å
Deposited: 2019-12-19
Authors: Janus, B.M., Ofek, G.
PDB entry 6vbr: The crystal structure of the 2009 H1N1/California PA endonuclease wild type in complex with SJ000986248
Classification: VIRAL PROTEIN/Inhibitor
Source organism: Influenza A virus (A/Luxembourg/43/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2019-12-19
Authors: Cuypers, M.G., Slavish, P.J., Rankovic, Z., White, S.W.
PDB entry 6vbs: The C2 Crystal form of SodCI Superoxide Dismutase at 1.7 A resolution with 6 molecules in the asymmetric unit.
Classification: OXYGEN BINDING
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-12-19
Authors: Satyshur, K.A., Forest, K.T., Newhouse, P.W.
PDB entry 6vbt: The P212121 Crystal structure of SodCI Superoxide Dismutase with 2 molecules in the asymmetric unit at 1.7 A resolution
Classification: OXYGEN BINDING
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-12-19
Authors: Satyshur, K.A., Forest, K.T., Newhouse, P.W.
PDB entry 6vbu: Structure of the bovine BBSome complex
Classification: PROTEIN TRANSPORT
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-12-19
Authors: Singh, S.K., Gui, M., Koh, F., Yip, M.C.J., Brown, A.
PDB entry 6vbv: Structure of the bovine BBSome:ARL6:GTP complex
Classification: PROTEIN TRANSPORT
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2019-12-19
Authors: Singh, S.K., Gui, M., Koh, F., Yip, M.C.J., Brown, A.
PDB entry 6vbw: Cryo-EM structure of Cascade-TniQ-dsDNA ternary complex
Classification: IMMUNE SYSTEM
Source organism: Vibrio cholerae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-12-19
Authors: Jia, N., Patel, D.J.
PDB entry 6vbx: Crystal structure of Mcl-1 in complex with 138E12 peptide, Lys-covalent antagonist
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-12-19
Authors: Pellecchia, M., Perry, J.J., Kenjic, N., Assar, Z.
PDB entry 6vby: Cinnamate 4-hydroxylase (C4H1) from Sorghum bicolor
Classification: OXIDOREDUCTASE
Source organism: Sorghum bicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-12-19
Authors: Zhang, B., Kang, C., Lewis, K.M.
PDB entry 6vbz: Crystal structure of the rat MLKL pseudokinase domain
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.192 Å
Deposited: 2019-12-19
Authors: Davies, K.A., Czabotar, P.E.
PDB entry 6vc0: Crystal structure of the horse MLKL pseudokinase domain
Classification: TRANSFERASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.746 Å
Deposited: 2019-12-19
Authors: Davies, K.A., Czabotar, P.E.
PDB entry 6vc1: Octreotide oxalate
Classification: DE NOVO PROTEIN
Experimental method: POWDER DIFFRACTION
Deposited: 2019-12-20
Authors: Spiliopoulou, M., Karavassili, F., Triandafillidis, D., Valmas, A., Kosinas, C., Fili, S., Barlos, K., Barlos, K.K., Morin, M., Reinle-Schmitt, M., Gozzo, F., Margiolaki, I.
PDB entry 6vc2: LRH-1 bound to SS-RJW100 and a fragment of the Tif2 Coactivator
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.697 Å
Deposited: 2019-12-20
Authors: Mays, S.G., Ortlund, E.A.
PDB entry 6vc3: Peanut lectin complexed with S-beta-D-thiogalactopyranosyl 6-deoxy-6-S-propynyl-beta-D-glucopyranoside (STG)
Classification: SUGAR BINDING PROTEIN
Source organism: Arachis hypogaea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-12-20
Authors: Otero, L.H., Primo, E.D., Cagnoni, A.J., Cano, M.E., Klinke, S., Goldbaum, F.A., Uhrig, M.L.
PDB entry 6vc4: Peanut lectin complexed with S-beta-D-Thiogalactopyranosyl beta-D-glucopyranoside derivative (STGD)
Classification: SUGAR BINDING PROTEIN
Source organism: Arachis hypogaea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-12-20
Authors: Otero, L.H., Primo, E.D., Cagnoni, A.J., Cano, M.E., Klinke, S., Goldbaum, F.A., Uhrig, M.L.
PDB entry 6vc5: 1.6 Angstrom Resolution Crystal Structure of endoglucanase from Komagataeibacter sucrofermentans
Classification: HYDROLASE
Source organism: Komagataeibacter sucrofermentans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-12-20
Authors: Wu, R., Kim, Y., Jedrzrjczak, R., Joachimiak, A.
PDB entry 6vc6: 2.1 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Gut Microorganisms in Complex with NAD and Mn2+
Classification: HYDROLASE
Source organism: Merdibacter massiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.133 Å
Deposited: 2019-12-20
Authors: Wu, R., Kim, Y., Endres, M., Joachimiak, J.
PDB entry 6vc7: Structure of the F349A mutant of the periplasmic domain of YejM from Salmonella typhimurium
Classification: Hydrolase, Transport protein
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2019-12-20
Authors: Gabale, U., Ressl, S.
PDB entry 6vc8: Crystal structure of wild-type KRAS4b(1-169) in complex with GMPPNP and Mg ion
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-12-20
Authors: Tran, T.H., Davies, D.R., Edwards, T.E., Simanshu, D.K.
PDB entry 6vc9: TB19 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2019-12-20
Authors: Zhou, Y.F., Lord, D.M.
PDB entry 6vca: TB38 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.73 Å
Deposited: 2019-12-20
Authors: Zhou, Y.F., Lord, D.M.
PDB entry 6vcb: Cryo-EM structure of the Glucagon-like peptide-1 receptor in complex with G protein, GLP-1 peptide and a positive allosteric modulator
Classification: SIGNALING PROTEIN/MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-12-20
Authors: Sun, B., Feng, D., Bueno, A., Kobilka, B., Sloop, K.
PDB entry 6vcc: Cryo-EM structure of the Dvl2 DIX filament
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2019-12-20
Authors: Enos, M., Kan, W., Muennich, S., Chen, D.H., Skiniotis, G., Weis, W.I.
PDB entry 6vcd: Cryo-EM structure of IRP2-FBXL5-SKP1 complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2019-12-20
Authors: Wang, H., Shi, H., Zheng, N.
PDB entry 6vce: HIV-1 wild type protease with GRL-026-18A, a crown-like tetrahydropyranotetrahydrofuran with a bridged methylene group as a P2 ligand
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2019-12-20
Authors: Wang, Y.-F., Kneller, D.W., Weber, I.T.
PDB entry 6vcf: Crystal structure of Nitrosotalea devanaterra carotenoid cleavage dioxygenase, iron form
Classification: OXIDOREDUCTASE
Source organism: Candidatus Nitrosotalea devanaterra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.687 Å
Deposited: 2019-12-20
Authors: Daruwalla, A., Shi, W., Kiser, P.D.
PDB entry 6vcg: Crystal structure of Nitrosotalea devanaterra carotenoid cleavage dioxygenase, cobalt form
Classification: OXIDOREDUCTASE
Source organism: Candidatus Nitrosotalea devanaterra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-12-20
Authors: Daruwalla, A., Shi, W., Kiser, P.D.
PDB entry 6vch: Crystal structure of Nitrosotalea devanaterra carotenoid cleavage dioxygenase in complex with 3-hydroxy-beta-apo-14'-carotenal
Classification: OXIDOREDUCTASE
Source organism: Candidatus Nitrosotalea devanaterra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-12-20
Authors: Daruwalla, A., Shi, W., Kiser, P.D.
PDB entry 6vci: Lipophilic envelope-spanning tunnel protein (LetB), domains MCE2-MCE3
Classification: LIPID TRANSPORT
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-12-21
Authors: Isom, G.L., Coudray, N., MacRae, M.R., McManus, C.T., Ekiert, D.C., Bhabha, G.
PDB entry 6vcj: Crystal structure of hsDHFR in complex with NADP+, DAP, and R-naproxen
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2019-12-21
Authors: Pedersen, L.C., London, R.E., Gabel, S.A., Krahn, J.M., DeRose, E.F.
PDB entry 6vck: Crystal structure of E.coli RppH-DapF in complex with GDP, Mg2+ and F-
Classification: RNA BINDING PROTEIN/ISOMERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2019-12-21
Authors: Gao, A., Vasilyev, N., Kaushik, A., Duan, W., Serganov, A.
PDB entry 6vcl: Crystal structure of E.coli RppH-DapF in complex with pppGpp, Mg2+ and F-
Classification: RNA BINDING PROTEIN/ISOMERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2019-12-21
Authors: Gao, A., Vasilyev, N., Kaushik, A., Duan, W., Serganov, A.
PDB entry 6vcm: Crystal structure of E.coli RppH-DapF in complex with GTP, Mg2+ and F-
Classification: RNA BINDING PROTEIN/ISOMERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2019-12-21
Authors: Gao, A., Vasilyev, N., Kaushik, A., Duan, W., Serganov, A.
PDB entry 6vcn: Crystal structure of E.coli RppH in complex with ppcpG
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-12-21
Authors: Gao, A., Vasilyev, N., Kaushik, A., Duan, W., Serganov, A.
PDB entry 6vco: Crystal structure of E.coli RppH in complex with ppcpA
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-12-21
Authors: Gao, A., Vasilyev, N., Kaushik, A., Duan, W., Serganov, A.
PDB entry 6vcp: Crystal structure of E.coli RppH in complex with UTP
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli S88
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-12-21
Authors: Gao, A., Vasilyev, N., Kaushik, A., Duan, W., Serganov, A.
PDB entry 6vcq: Crystal structure of E.coli RppH in complex with GTP
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-12-21
Authors: Gao, A., Vasilyev, N., Kaushik, A., Duan, W., Serganov, A.
PDB entry 6vcr: Crystal structure of E.coli RppH in complex with CTP
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli S88
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-12-21
Authors: Gao, A., Vasilyev, N., Kaushik, A., Duan, W., Serganov, A.
PDB entry 6vcs: SRA domain of UHRF1 in complex with DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-12-22
Authors: Dong, C., Tempel, W., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6vct: Mucor circinelloides FKBP12 protein bound with APX879 in C2221 space group
Classification: ISOMERASE
Source organism: Mucor circinelloides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2019-12-23
Authors: Gobeil, S., Spicer, L.
PDB entry 6vcu: Homo sapiens FKBP12 protein bound with APX879 in P32 space group
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2019-12-23
Authors: Gobeil, S., Spicer, L.
PDB entry 6vcv: Aspergillus fumigatus FKBP12 protein bound with APX879 in P1 space group
Classification: ISOMERASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-12-23
Authors: Gobeil, S., Spicer, L.
PDB entry 6vcw: Crystal structure of Medicago truncatula S-adenosylmethionine Synthase 3A (MtMAT3A)
Classification: TRANSFERASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2019-12-23
Authors: Sekula, B., Ruszkowski, M., Dauter, Z.
PDB entry 6vcx: Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 1 (AtMAT1)
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2019-12-23
Authors: Sekula, B., Ruszkowski, M., Dauter, Z.
PDB entry 6vcy: Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 1 (AtMAT1) in complex with 5'-methylthioadenosine
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2019-12-23
Authors: Sekula, B., Ruszkowski, M., Dauter, Z.
PDB entry 6vcz: Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 2 (AtMAT2)
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2019-12-23
Authors: Sekula, B., Ruszkowski, M., Dauter, Z.
PDB entry 6vd0: Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 2 (AtMAT2) in complex with free Methionine and AMPCPP
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-12-23
Authors: Sekula, B., Ruszkowski, M., Dauter, Z.
PDB entry 6vd1: Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 2 (AtMAT2) in complex with S-adenosylmethionine and PPNP
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2019-12-23
Authors: Sekula, B., Ruszkowski, M., Dauter, Z.
PDB entry 6vd2: Crystal structure of Arabidopsis thaliana S-adenosylmethionine Synthase 2 (AtMAT2) in complex with S-adenosylmethionine
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2019-12-23
Authors: Sekula, B., Ruszkowski, M., Dauter, Z.
PDB entry 6vd3: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Mesoporphyrin IX and Substrate 4-bromophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2019-12-23
Authors: Ghiladi, R.A., de Serrano, V.S., Malewschik, T.
PDB entry 6vd4: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Mesoporphyrin IX and Substrate 4-bromo-ortho-cresol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.954 Å
Deposited: 2019-12-23
Authors: Ghiladi, R.A., de Serrano, V.S., Malewschik, T.
PDB entry 6vd5: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Mesoporphyrin IX and Substrate Trichlorophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2019-12-23
Authors: Ghiladi, R.A., de Serrano, V.S., Malewschik, T.
PDB entry 6vd6: Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Mesoporphyrin IX and Substrate 4-nitrophenol
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.563 Å
Deposited: 2019-12-23
Authors: Ghiladi, R.A., de Serrano, V.S., Malewschik, T.
PDB entry 6vd7: Cryo-EM structure of Xenopus tropicalis pannexin 1 channel
Classification: TRANSPORT PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2019-12-23
Authors: Syrjanen, J.L., Michalski, M., Furukawa, H., Kawate, T.
PDB entry 6vd8: Metal-bound C-terminal domain of CzcD transporter from Pseudomonas aeruginosa
Classification: TRANSPORT PROTEIN
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-12-23
Authors: Maher, M.J.
PDB entry 6vd9: Metal-bound C-terminal domain of the CzcD transporter from Cuprividus metallidurans
Classification: TRANSPORT PROTEIN
Source organism: Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2019-12-23
Authors: Maher, M.J.
PDB entry 6vda: Metal-bound C-terminal domain of CzcD transporter from Thermotoga maritima
Classification: TRANSPORT PROTEIN
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-12-23
Authors: Maher, M.J.
PDB entry 6vdb: SETD2 in complex with a H3-variant super-substrate peptide
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-12-24
Authors: Beldar, S., Tempel, W., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Jeltsch, A., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6vdc: POL domain of Pol1 from M. smegmatis
Classification: TRANSFERASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2019-12-24
Authors: Shuman, S., Goldgur, Y., Ghosh, S.
PDB entry 6vdd: POL domain of Pol1 from M. smegmatis complex with DNA primer-template and dNTP
Classification: TRANSFERASE/DNA
Source organism: Mycolicibacterium smegmatis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-12-24
Authors: Shuman, S., Goldgur, Y., Ghosh, S.
PDB entry 6vde: Full-length M. smegmatis Pol1
Classification: TRANSFERASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.713 Å
Deposited: 2019-12-24
Authors: Shuman, S., Goldgur, Y., Ghosh, S.
PDB entry 6vdf: Structure of the periplasmic domain of YejM from Salmonella typhimurium (twinned)
Classification: Hydrolase, Transport protein
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2019-12-25
Authors: Gabale, U., Ressl, S.
PDB entry 6vdg: Crystal Structure of the Y182A HisF Mutant from Thermotoga maritima
Classification: LYASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2019-12-27
Authors: Almeida, V.M., Matsuyama, B.Y., Farah, C.S., Marana, S.R.