LiteFold/PDB huggingface dataset:
PDB entry 7lta: Galectin-1 in complex with Trehalose
Classification: CARBOHYDRATE-BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2021-02-19
Authors: Grimm, C., Bechold, J., Seibel, J.
PDB entry 7ltb: Crystal Structure of Keratinicyclin B
Classification: ANTIBIOTIC
Source organism: Amycolatopsis keratiniphila
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2021-02-19
Authors: Davis, K.M., Jeffrey, P.D., Seyedsayamdost, M.R.
PDB entry 7ltc: Structure of the alpha-N-methyltransferase (SonM) and RiPP precursor (SonA) heteromeric complex (no cofactor)
Classification: TRANSFERASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-02-19
Authors: Miller, F.S., Crone, K.K., Jensen, M.R., Shaw, S., Harcombe, W.R., Elias, M., Freeman, M.F.
PDB entry 7ltd: X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 1
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9 Å
Deposited: 2021-02-19
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lte: Structure of the alpha-N-methyltransferase (SonM) and RiPP precursor (SonA) heteromeric complex (with SAH)
Classification: TRANSFERASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-02-19
Authors: Miller, F.S., Crone, K.K., Jensen, M.R., Shaw, S., Harcombe, W.R., Elias, M., Freeman, M.F.
PDB entry 7ltf: Structure of the alpha-N-methyltransferase (SonM mutant Y58F) and RiPP precursor (SonA) heteromeric complex (no cofactor)
Classification: TRANSFERASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-02-19
Authors: Miller, F.S., Crone, K.K., Jensen, M.R., Shaw, S., Harcombe, W.R., Elias, M., Freeman, M.F.
PDB entry 7ltg: STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH APICIDIN
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-19
Authors: Klein, D.J., Beshore, D.C.
PDB entry 7lth: Structure of the alpha-N-methyltransferase (SonM mutant Y93F) and RiPP precursor (SonA) heteromeric complex (no cofactor)
Classification: TRANSFERASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-19
Authors: Miller, F.S., Crone, K.K., Jensen, M.R., Shaw, S., Harcombe, W.R., Elias, M., Freeman, M.F.
PDB entry 7lti: X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 2
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 0.91 Å
Deposited: 2021-02-19
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7ltj: Room-temperature X-ray structure of SARS-CoV-2 main protease (3CL Mpro) in complex with a non-covalent inhibitor Mcule-5948770040
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-19
Authors: Kovalevsky, A., Kneller, D.W., Coates, L.
PDB entry 7ltk: STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN INHIBITOR THAT LACKS A ZINC BINDING GROUP (COMPOUND 12)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2021-02-19
Authors: Klein, D.J., Beshore, D.C.
PDB entry 7ltl: STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN INHIBITOR LACKING A ZINC BINDING GROUP (COMPOUND 19)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2021-02-19
Authors: Klein, D.J., Beshore, D.C.
PDB entry 7ltm: Hum8 capsid
Classification: VIRUS
Source organism: Adeno-associated virus - 8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2021-02-19
Authors: Mietzsch, M., Agbandje-McKenna, M.
PDB entry 7ltn: Crystal structure of Mpro in complex with inhibitor CDD-1713
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2021-02-19
Authors: Lu, S., Palzkill, T., Matzuk, M., Young, D., Melek, N., Chamakuri, S.
PDB entry 7lto: Nse5-6 complex
Classification: STRUCTURAL PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-02-19
Authors: Yu, Y., Li, S.B., Zheng, S., Tangy, S., Koyi, C., Wan, B.B., Kung, H.H., Andrej, S., Alex, K., Patel, D.J., Zhao, X.L.
PDB entry 7ltp: The internal aldimine form of the wild-type Salmonella typhimurium Tryptophan Synthase in complex with inhibitor N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the enzyme alpha-site, cesium ion at the metal coordination site and the product L-tryptophan at the enzyme beta-site at 1.47 Angstrom resolution
Classification: LYASE/LYASE INHIBITOR
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2021-02-19
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7ltq: Crystal Structure of a histidine kinase from Burkholderia ambifaria MC40-6
Classification: TRANSFERASE
Source organism: Burkholderia ambifaria (strain MC40-6)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-02-19
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7ltr: Structure of the heteromeric complex between the alpha-N-methyltransferase (SonM) and a truncated construct of the RiPP precursor (SonA) (with SAM)
Classification: TRANSFERASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-02-19
Authors: Miller, F.S., Crone, K.K., Jensen, M.R., Shaw, S., Harcombe, W.R., Elias, M., Freeman, M.F.
PDB entry 7lts: Structure of the alpha-N-methyltransferase (SonM mutant R67A) and RiPP precursor (SonA) heteromeric complex (with SAH)
Classification: TRANSFERASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2021-02-20
Authors: Miller, F.S., Crone, K.K., Jensen, M.R., Shaw, S., Harcombe, W.R., Elias, M., Freeman, M.F.
PDB entry 7ltt: SAMHD1(113-626) H206R D207N R366C
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-02-20
Authors: Temple, J.T., Bowen, N.E.
PDB entry 7ltu: AALALL SEGMENT FROM THE NUCLEOPROTEIN OF SARS-COV-2, RESIDUES 217-222, CRYSTAL FORM 1
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.122 Å
Deposited: 2021-02-20
Authors: Zee, C.-T., Sawaya, M.R., Rodriguez, J.A., Eisenberg, D.S.
PDB entry 7ltv: X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 3
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2021-02-20
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7ltw: Crystal structure of the mouse Kirrel2 D1 homodimer
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-20
Authors: Roman, C.A., Pak, J.S., Wang, J., Ozkan, E.
PDB entry 7ltx: EGFR (T790M/V948R) in complex with quinazolinone allosteric inhibitor
Classification: TRANSFERASE/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-20
Authors: Beyett, T.S., Eck, M.J.
PDB entry 7lty: Bruton's tyrosine kinase in complex with compound 23
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2021-02-20
Authors: Metrick, C.M., Marcotte, D.J.
PDB entry 7ltz: Bruton's tyrosine kinase in complex with compound 51
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2021-02-20
Authors: Metrick, C.M., Marcotte, D.J.
PDB entry 7lu0: X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 4
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2021-02-20
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lu1: X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 5
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2021-02-20
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lu2: X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 6
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2021-02-20
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lu3: X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 7
Classification: HYDROLASE
Source organism: Parengyodontium album
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2021-02-20
Authors: Yabukarski, F., Doukov, T., Herschlag, D.
PDB entry 7lu4: Crystal structure of bacterial glycyl tRNA synthetase in complex with glycine
Classification: LIGASE
Source organism: Thermanaerothrix daxensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-20
Authors: Torres-Larios, A.
PDB entry 7lu5: SAMHD1(113-626) H206R D207N R366H
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.57 Å
Deposited: 2021-02-20
Authors: Temple, J.T., Bowen, N.E.
PDB entry 7lu6: Crystal structure of the mouse Kirrel3 D1 homodimer
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-21
Authors: Roman, C.A., Pak, J.S., Wang, J., Ozkan, E.
PDB entry 7lu7: Human TDO (hTDO) in complex with NLG919 analog
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-21
Authors: Yeh, S.-R.
PDB entry 7lu8: Structure of the cryptic HMA domain of the human copper transporter ATP7A
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-02-21
Authors: Lee, W., Uhlemann, E.E., Tonelli, M., Dmitriev, O.Y.
PDB entry 7lu9: Cryo-EM structure of DH851.3 bound to HIV-1 CH505 Env
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.6 Å
Deposited: 2021-02-21
Authors: Manne, K., Edwards, R.J., Acharya, P.
PDB entry 7lua: Cryo-EM structure of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1; Simian-Human immunodeficiency virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2021-02-21
Authors: Manne, K., Edwards, R.J., Acharya, P.
PDB entry 7lub: Crystal structure of recombinant human fumarase in complex with D-2-amino-3-phosphono-propionic acid
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-02-21
Authors: Cardoso, I.A., Nonato, M.C.
PDB entry 7luc: Cryo-EM structure of RSV preF bound by Fabs 32.4K and 01.4B
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Respiratory syncytial virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2021-02-22
Authors: Wrapp, D., McLellan, J.S.
PDB entry 7lud: Crystal structure of Fab ADI-14442
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-02-22
Authors: Rush, S.A., McLellan, J.S.
PDB entry 7lue: Prefusion RSV F glycoprotein bound by neutralizing site V-directed antibody ADI-14442
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Respiratory syncytial virus A2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-02-22
Authors: Gilman, M.S.A., McLellan, J.S.
PDB entry 7luf: HSV1 polymerase ternary complex with dsDNA and PNU-183792
Classification: Transferase/DNA
Source organism: Human herpesvirus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2021-02-22
Authors: Hayes, R.P., Klein, D.
PDB entry 7lug: Crystal structure of the pnRFP B30Y mutant
Classification: FLUORESCENT PROTEIN
Source organism: Discosoma sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-22
Authors: Huang, M., Ng, H.L., Pang, Y., Zhang, S., Fan, Y., Yeh, H., Xiong, Y., Li, X., Ai, H.
PDB entry 7luh: Burkholderia pseudomallei Disulfide bond forming protein A (DsbA) liganded with fragment bromophenoxy propanamide
Classification: OXIDOREDUCTASE
Source organism: Burkholderia pseudomallei (strain K96243)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2021-02-22
Authors: Petit, G.A., Martin, J.L., McMahon, R.M.
PDB entry 7lui: Crystal structure of Vibrio cholerae DsbA in complex with bile salt taurocholate
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-02-22
Authors: Wang, G., Heras, B.
PDB entry 7luj: Burkholderia pseudomallei Disulfide bond forming protein A (DsbA) liganded with fragment 4-methoxy-N-phenylbenzenesulfonamide
Classification: OXIDOREDUCTASE
Source organism: Burkholderia pseudomallei (strain K96243)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2021-02-22
Authors: Petit, G.A., Martin, J.L., McMahon, R.M.
PDB entry 7luk: CRYSTAL STRUCTURE OF RAR-RELATED ORPHAN RECEPTOR C (NHIS-RORGT(244-487)-L6-SRC1(678-692) IN COMPLEX WITH AN AZATRICYCLIC RORGT INVERSE AGONIST
Classification: TRANSFERASE
Experimental method: X-RAY DIFFRACTION
Resolution: 2.087 Å
Deposited: 2021-02-22
Authors: Sack, J.S.
PDB entry 7lul: Structure of the MM2 Erbin PDZ variant in complex with a high-affinity peptide
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-02-22
Authors: Singer, A.U., Teyra, J., McLaughlin, M., Ernst, A., Sicheri, F., Sidhu, S.S.
PDB entry 7lum: Human TRiC in ATP/AlFx closed state
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2021-02-22
Authors: Knowlton, J.J., Gestaut, D., Ma, B., Taylor, G., Seven, A.B., Leitner, A., Wilson, G.J., Shanker, S., Yates, N.A., Prasad, B.V.V., Aebersold, R., Chiu, W., Frydman, J., Dermody, T.S.
PDB entry 7lun: Human PARP14 (ARTD8), catalytic fragment in complex with RBN011980
Classification: TRANSFERASE/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2021-02-22
Authors: Dorsey, B.W., Swinger, K.K., Schenkel, L.B., Church, W.D., Perl, N.R., Vasbinder, M.M., Wigle, T.J., Kuntz, K.W.
PDB entry 7luo: N-terminus of Skp2 bound to Cyclin A
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.17 Å
Deposited: 2021-02-22
Authors: Kelso, S., Ceccarelli, D.F., Sicheri, F.
PDB entry 7lup: Human TRiC/CCT complex with reovirus outer capsid protein sigma-3
Classification: CHAPERONE
Source organism: Homo sapiens; Reovirus type 3 (strain Dearing)
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2021-02-22
Authors: Knowlton, J.J., Gestaut, D., Ma, B., Taylor, G., Seven, A.B., Leitner, A., Wilson, G.J., Shanker, S., Yates, N.A., Prasad, B.V.V., Aebersold, R., Chiu, W., Frydman, J., Dermody, T.S.
PDB entry 7lur: Stable Effector Functionless 2 (SEFL2) IgG1 Fc Scaffold Bound to a Minimized Version of the B-domain (Mini-Z) from Protein A Called Z34C
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-23
Authors: Sudom, A., Garces, F., Wang, Z.
PDB entry 7lus: IgG2 Fc Charge Pair Mutation version 1 (CPMv1)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-02-23
Authors: Sudom, A., Whittington, D., Garces, F., Wang, Z.
PDB entry 7lut: The internal aldimine form of the wild-type Salmonella typhimurium Tryptophan Synthase in complex with cesium ion at the metal coordination site and the product L-tryptophan at the enzyme beta-site at 1.60 Angstrom resolution
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-02-23
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7luu: Kinetic and Structural Characterization of the First B3 Metallo-beta-Lactamase with an Active Site Glutamic Acid
Classification: HYDROLASE
Source organism: Sphingobium indicum (strain DSM 16412 / CCM 7286 / MTCC 6364 / B90A)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2021-02-23
Authors: Wilson, L., Knaven, E., Morris, M.T., Schenk, G.
PDB entry 7luv: Cryo-EM structure of the yeast THO-Sub2 complex
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces bayanus; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-02-23
Authors: Xie, Y., Ren, Y.
PDB entry 7luw: Structural studies about ScnTx neurotoxin using Solution NMR 2D and 3D
Classification: NEUROPEPTIDE
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2021-02-23
Authors: del Rio-Portilla, F., Lopez-Giraldo, A.E.
PDB entry 7lux: AALALL segment from the Nucleoprotein of SARS-CoV-2, residues 217-222, crystal form 2
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.303 Å
Deposited: 2021-02-23
Authors: Lu, J., Zee, C.-T., Sawaya, M.R., Rodriguez, J.A., Eisenberg, D.S.
PDB entry 7luy: Crystal Structure of guanylate kinase from Bartonella henselae str. Houston-1
Classification: TRANSFERASE
Source organism: Bartonella henselae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-23
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7luz: GQTVTK segment from the Nucleoprotein of SARS-CoV-2, residues 243-248
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.101 Å
Deposited: 2021-02-23
Authors: Balbirnie, M., Sawaya, M.R., Eisenberg, D.S., Cascio, D.
PDB entry 7lv0: Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-02-23
Authors: Demo, G., Loveland, A.B., Svidritskiy, E., Gamper, H.B., Hou, Y.M., Korostelev, A.A.
PDB entry 7lv1: Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Cu(II)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2021-02-23
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lv2: GSQASS segment from the Nucleoprotein of SARS-CoV-2, residues 179-184
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.301 Å
Deposited: 2021-02-23
Authors: Hou, K., Sawaya, M.R., Eisenberg, D.S., Cascio, D.
PDB entry 7lv3: Crystal structure of human protein kinase G (PKG) R-C complex in inhibited state
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2021-02-23
Authors: Sharma, R., Lying, Q., Casteel, D., Kim, C.
PDB entry 7lv4: Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H97A, crystallized in the presence of Cu(II)
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-02-23
Authors: Choi, T.S., Tezcan, F.A.
PDB entry 7lv5: The internal aldimine form of the wild-type Salmonella typhimurium Tryptophan Synthase in complex with inhibitor N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the enzyme alpha-site, cesium ion at the metal coordination site and L-Histidine at the enzyme beta-site at 1.55 Angstrom resolution
Classification: LYASE/LYASE INHIBITOR
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-02-23
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7lv6: The structure of MalL mutant enzyme S536R from Bacillus subtilis
Classification: HYDROLASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2021-02-24
Authors: Hamill, C.J., Prentice, E.J., Bahl, C.D., Truebridge, I.S., Arcus, V.L.
PDB entry 7lv7: Crystal Structure of Branched-chain amino acid aminotransferase from Giardia lamblia ATCC 50803
Classification: TRANSFERASE
Source organism: Giardia intestinalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7lv8: Structure of the Marseillevirus nucleosome
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Marseillevirus marseillevirus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-02-24
Authors: Valencia-Sanchez, M.I., Abini-Agbomson, S., Armache, K.-J.
PDB entry 7lv9: Marseillevirus heterotrimeric (hexameric) nucleosome
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Marseillevirus marseillevirus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2021-02-24
Authors: Valencia-Sanchez, M.I., Abini-Agbomson, S., Armache, K.-J.
PDB entry 7lva: Solution structure of the HIV-1 PBS-segment
Classification: RNA
Experimental method: SOLUTION NMR, SOLUTION SCATTERING
Deposited: 2021-02-24
Authors: Heng, X., Song, Z.
PDB entry 7lvb: CHOLERA TOXIN B SUBUNIT WITH ATTACHED SIV EPITOPE
Classification: TOXIN
Source organism: Simian immunodeficiency virus; Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2021-02-24
Authors: Patskovsky, Y., Cardozo, T.J.
PDB entry 7lvc: E. coli DHFR by Native Mn,P,S-SAD at Room Temperature
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-02-24
Authors: Greisman, J.B., Dalton, K.M., Hekstra, D.R.
PDB entry 7lve: Jug r 2 Leader Sequence Residues 117-161
Classification: ALLERGEN
Source organism: Juglans regia
Experimental method: SOLUTION NMR
Deposited: 2021-02-25
Authors: Mueller, G.A., Foo, A.C.Y., DeRose, E.F.
PDB entry 7lvf: Jug R 2 Leader Sequence Residues 1-57
Classification: ALLERGEN
Source organism: Juglans regia
Experimental method: SOLUTION NMR
Deposited: 2021-02-25
Authors: Mueller, G.A., Foo, A.C.Y., DeRose, E.F.
PDB entry 7lvg: Jug r 2 Leader Sequence Residues 69-111
Classification: ALLERGEN
Source organism: Juglans regia
Experimental method: SOLUTION NMR
Deposited: 2021-02-25
Authors: Mueller, G.A., Foo, A.C.Y., DeRose, E.F.
PDB entry 7lvh: CRYSTAL STRUCTURE OF AP2 ASSOCIATED KINASE 1 ISOFORM 1 COMPLEXED WITH LIGAND N-[3-METHOXY-4-(1,3-OXAZOL-5-YL)PHENYL]-3-(PROPAN-2-YL)PIPERIDINE-2-CARBOXAMIDE
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2021-02-25
Authors: Muckelbauer, J.K.
PDB entry 7lvi: CRYSTAL STRUCTURE OF AP2 ASSOCIATED KINASE 1 ISOFORM 1 COMPLEXED WITH LIGAND (2R)-2-AMINO-N-[3-METHOXY-4- (1,3-OXAZOL-5-YL)PHENYL]-4-METHYLPENTANAMIDE
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-02-25
Authors: Muckelbauer, J.K.
PDB entry 7lvj: CASP8 isoform G DED domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-02-25
Authors: Weichert, K., Lu, F., Kodandapani, L., Sauder, J.M.
PDB entry 7lvk: Cfr-modified 50S subunit from Escherichia coli
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2021-02-25
Authors: Stojkovic, V., Myasnikov, A.G., Frost, A., Fujimori, D.G.
PDB entry 7lvl: Dihydrodipicolinate synthase bound with allosteric inhibitor (S)-lysine from Candidatus Liberibacter solanacearum
Classification: LYASE
Source organism: Candidatus Liberibacter solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2021-02-25
Authors: Gilkes, J.M., Frampton, R.A., Board, A.J., Sheen, C.R., Smith, G.R., Dobson, R.C.J.D.
PDB entry 7lvm: CASP8 isoform B DED domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2021-02-25
Authors: Weichert, K., Lu, F., Kodandapani, L., Sauder, J.M.
PDB entry 7lvn: Solution structure of tarantula toxin omega-Avsp1a
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2021-02-26
Authors: Chin, Y.K.Y., Herzig, V., King, G.F.
PDB entry 7lvo: Cryptococcus neoformans GAR synthetase
Classification: BIOSYNTHETIC PROTEIN, LIGASE
Source organism: Cryptococcus neoformans var. grubii serotype A
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-02-26
Authors: Chua, S.M.H., Luo, Z., Lim, B.Y.J., Kobe, B., Fraser, J.A.
PDB entry 7lvp: Cryptococcus neoformans AIR synthetase
Classification: BIOSYNTHETIC PROTEIN, LIGASE
Source organism: Cryptococcus neoformans var. grubii serotype A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2021-02-26
Authors: Chua, S.M.H., Luo, Z., Lim, B.Y.J., Kobe, B., Fraser, J.A.
PDB entry 7lvq: KIF14[391-743] - AMP-PNP closed state class in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-02-26
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 7lvr: KIF14[391-743] - ADP-AlFx closed state class in complex with a microtubule
Classification: MOTOR PROTEIN
Source organism: Mus musculus; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-02-26
Authors: Benoit, M.P.M.H., Asenjo, A.B., Paydar, M., Dhakal, S., Kwok, B., Sosa, H.
PDB entry 7lvs: The CBP TAZ1 Domain in Complex with a CITED2-HIF-1-Alpha Fusion Peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2021-02-26
Authors: Appling, F.D., Berlow, R.B., Stanfield, R.L., Dyson, H.J., Wright, P.E.
PDB entry 7lvt: Structure of full-length GluK1 with L-Glu
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2021-02-26
Authors: Meyerson, J.R., Selvakumar, P.
PDB entry 7lvu: Structure of RSV F-directed VHH Cl184
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2021-02-26
Authors: Hsieh, C.-L., McLellan, J.S.
PDB entry 7lvv: cryoEM structure DrdV-DNA complex
Classification: HYDROLASE/DNA
Source organism: Deinococcus wulumuqiensis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2021-02-26
Authors: Shen, B.W., Stoddard, B.L.
PDB entry 7lvw: Structure of RSV F in Complex with VHH Cl184
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Lama glama; Respiratory syncytial virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-26
Authors: Hsieh, C.-L., McLellan, J.S.
PDB entry 7lvx: The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the enzyme alpha-site and cesium ion at the metal coordination site at 1.55 Angstrom resolution
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-02-26
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7lvy: Crystal Structure of Tetur04g02350
Classification: TRANSFERASE
Source organism: Tetranychus urticae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-02-26
Authors: Danehsian, L., Kluza, A., Dermauw, W., Wybouw, N., Van Leeuwen, T., Chruszcz, M.
PDB entry 7lvz: Crystal structure of ADO
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2021-02-26
Authors: Bingman, C.A., Fernandez, R.L., Smith, R.W., Fox, B.G., Brunold, T.C.
PDB entry 7lw0: Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging
Classification: VIRAL PROTEIN
Source organism: Escherichia phage lambda
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2021-02-26
Authors: Ortega, M.E.
PDB entry 7lw1: Human phosphofructokinase-1 liver type bound to activator NA-11
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-02-27
Authors: Lynch, E.M., Kollman, J.M., Webb, B.
PDB entry 7lw2: Crystal structure of EV-D68 2A protease N84T mutant
Classification: HYDROLASE
Source organism: Human enterovirus D68
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2021-02-27
Authors: Liu, C., Lee, M.-Y., Liu, W., Wang, J.
PDB entry 7lw3: Structure of SARS-CoV-2 nsp16/nsp10 complex in presence of Cap-1 analog (m7GpppAmU) and SAH
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-27
Authors: Gupta, Y.K., Viswanathan, T., Misra, A., Qi, S.
PDB entry 7lw4: Structure of SARS-CoV-2 nsp16/nsp10 complex in presence of S-adenosyl-L-homocysteine (SAH)
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-27
Authors: Gupta, Y.K., Viswanathan, T., Misra, A., Qi, S.
PDB entry 7lw6: The crystal structure of the 2009/H1N1/California PA endonuclease I38T mutant in complex with Raltegravir
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Influenza A virus (A/Luxembourg/43/2009(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2021-02-27
Authors: Cuypers, M.G., Slavish, P.J., White, S.W., Rankovik, Z.
PDB entry 7lw7: Human Exonuclease 5 crystal structure
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-27
Authors: Tsai, C.L., Tainer, J.A.
PDB entry 7lw8: Human Exonuclease 5 crystal structure in complex with a ssDNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2021-02-28
Authors: Tsai, C.L., Tainer, J.A.
PDB entry 7lw9: Human Exonuclease 5 crystal structure in complex with ssDNA, Sm, and Na
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2021-02-28
Authors: Tsai, C.L., Tainer, J.A.
PDB entry 7lwa: Human Exonuclease 5 crystal structure (T88E) in complex with ssDNA and Mg
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-02-28
Authors: Tsai, C.L., Tainer, J.A.
PDB entry 7lwb: Crystal Structure of phospho-Rab8a with the RH2 domain (117-165) of RILPL2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-02-28
Authors: Waschbusch, D., Khan, A.R.
PDB entry 7lwc: Goat beta-lactoglobulin mutant Q59A
Classification: LIPID TRANSPORT
Source organism: Capra hircus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-02-28
Authors: Munoz, D.A., Dobson, R.C.J.
PDB entry 7lwd: Cryo-EM structure of the wild-type human serotonin transporter complexed with vilazodone, imipramine and 15B8 Fab
Classification: TRANSPORT PROTEIN/Immune System
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2021-03-01
Authors: Yang, D., Kalenderoglou, I.E., Gouaux, E., Coleman, J.A., Loland, C.J.
PDB entry 7lwe: Crystal structure of the BCL6 BTB domain in complex with OICR-7629
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2021-03-01
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7lwf: Crystal structure of the BCL6 BTB domain in complex with OICR-9320
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2021-03-01
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7lwg: Crystal structure of the BCL6 BTB domain in complex with OICR-12694
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-03-01
Authors: Kuntz, D.A., Prive, G.G.
PDB entry 7lwh: Human neurofibromin 2/merlin residues 1-339 in complex with LATS1
Classification: CELL ADHESION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.606 Å
Deposited: 2021-03-01
Authors: Primi, M.C., Rangarajan, E.S., Izard, T.
PDB entry 7lwi: Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 3-RBD down conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwj: Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 3-RBD down conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwk: Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 3-RBD down conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwl: Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 3-RBD down conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwm: Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 1-RBD up conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwn: Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 1-RBD up conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwo: Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 1-RBD up conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwp: Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 2-RBD up conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwq: Mink Cluster 5-associated SARS-CoV-2 spike protein(S-GSAS-D614G-delFV) missing the S1 subunit and SD2 subdomain of one protomer
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwr: Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage P21
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-03-01
Authors: Ortega, M.E.
PDB entry 7lws: UK (B.1.1.7) SARS-CoV-2 S-GSAS-D614G variant spike protein in the 3-RBD-down conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwt: UK (B.1.1.7) SARS-CoV-2 spike protein variant (S-GSAS-B.1.1.7) in the 1-RBD-up conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwu: UK (B.1.1.7) SARS-CoV-2 spike protein variant (S-GSAS-B.1.1.7) in the 1-RBD-up conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwv: UK (B.1.1.7) SARS-CoV-2 spike protein variant (S-GSAS-B.1.1.7) in the 1-RBD-up conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lww: Triple mutant (K417N-E484K-N501Y) SARS-CoV-2 spike protein in the 1-RBD-up conformation (S-GSAS-D614G-K417N-E484K-N501Y)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-03-01
Authors: Gobeil, S., Acharya, P.
PDB entry 7lwy: TVV viral capsid protein
Classification: VIRAL PROTEIN
Source organism: Trichomonas vaginalis virus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-03-02
Authors: Zhou, Z.H., Stevens, A.W., Cui, Y.X., Johnson, P.J., Muratore, K.A.
PDB entry 7lwz: Apo Structure of Vibrio cholerae dGTPase protein VC1979
Classification: HYDROLASE
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2021-03-02
Authors: Sikkema, A.P., Horng, J., Klemm, B.P., Schaaper, R.M., Hall, T.M.T.
PDB entry 7lx0: Quantitative assessment of chlorophyll types in cryo-EM maps of photosystem I acclimated to far-red light
Classification: PHOTOSYNTHESIS
Source organism: Fischerella thermalis PCC 7521
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2021-03-02
Authors: Gisriel, C.J., Wang, J.
PDB entry 7lx1: The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with cesium ion at the metal coordination site at 1.61 Angstrom resolution
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2021-03-02
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7lx2: Cryo-EM structure of ConSOSL.UFO.664 (ConS) in complex with bNAb PGT122
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2021-03-03
Authors: Martin, G.M., Ward, A.B., Sattentau, Q.J.
PDB entry 7lx3: Cryo-EM structure of EDC-crosslinked ConSOSL.UFO.664 (ConS-EDC) in complex with bNAb PGT122
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2021-03-03
Authors: Martin, G.M., Ward, A.B., Sattentau, Q.J.
PDB entry 7lx4: Structure of Hact-SCRiP1
Classification: UNKNOWN FUNCTION
Source organism: Heliofungia actiniformis
Experimental method: SOLUTION NMR
Deposited: 2021-03-03
Authors: Schmidt, C.A., Daly, N.L.
PDB entry 7lx5: The SARS-CoV-2 spike protein receptor binding domain bound to neutralizing nanobodies WNb 2 and WNb 10
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2021-03-03
Authors: Pymm, P., Glukhova, A., Tham, W.-H.
PDB entry 7lx6: T4 lysozyme mutant L99A
Classification: PROTEIN BINDING,HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2021-03-03
Authors: Kamenik, A.S., Singh, I., Lak, P., Balius, T.E., Liedl, K.R., Shoichet, B.K.
PDB entry 7lx7: T4 lysozyme mutant L99A
Classification: PROTEIN BINDING,HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2021-03-03
Authors: Kamenik, A.S., Singh, I., Lak, P., Balius, T.E., Liedl, K.R., Shoichet, B.K.
PDB entry 7lx8: T4 lysozyme mutant L99A
Classification: PROTEIN BINDING
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2021-03-03
Authors: Kamenik, A.S., Singh, I., Lak, P., Balius, T.E., Liedl, K.R., Shoichet, B.K.
PDB entry 7lx9: T4 lysozyme mutant L99A
Classification: PROTEIN BINDING,HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2021-03-03
Authors: Kamenik, A.S., Singh, I., Lak, P., Balius, T.E., Liedl, K.R., Shoichet, B.K.
PDB entry 7lxa: T4 lysozyme mutant L99A
Classification: PROTEIN BINDING,HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2021-03-03
Authors: Kamenik, A.S., Singh, I., Lak, P., Balius, T.E., Liedl, K.R., Shoichet, B.K.
PDB entry 7lxb: HeLa-tubulin in complex with cryptophycin 52
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2021-03-03
Authors: Eren, E.
PDB entry 7lxc: Structure and Interactions of DED1 of human cFLIP
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-03-03
Authors: Panaitiu, A.E., Basiashvili, T., Mierke, D.F., Pellegrini, M.
PDB entry 7lxd: Structure of yeast DNA Polymerase Zeta (apo)
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.11 Å
Deposited: 2021-03-03
Authors: Truong, C.D., Craig, T.A., Cui, G., Botuyan, M.V., Serkasevich, R.A., Chan, K.-Y., Mer, G., Chiu, P.-L., Kumar, R.
PDB entry 7lxe: ENAH EVH1 domain bound to peptide from ABI1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2021-03-03
Authors: Keating, A.E., Grant, R.A., Hwang, T.H.
PDB entry 7lxf: ENAH EVH1 domain bound to peptide from protein PCARE
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2021-03-03
Authors: Hwang, T., Grant, R.A., Keating, A.E.
PDB entry 7lxg: Homocitrullinated beta-lactamase OXA-48
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-03-03
Authors: Serrano-Negron, J.E., King, D.T., Vocadlo, D.J.
PDB entry 7lxh: Bacillus cereus DNA glycosylase AlkD bound to a CC1065-adenine nucleobase adduct and DNA containing an abasic site
Classification: HYDROLASE/DNA/ANTIBIOTIC
Source organism: Bacillus cereus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.667 Å
Deposited: 2021-03-03
Authors: Mullins, E.A., Eichman, B.F.
PDB entry 7lxi: Crystal structure of S-adenosylmethionine-dependent methyltransferase UmaA from Mycobacterium tuberculosis in complex with SAH
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-03-03
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7lxj: Bacillus cereus DNA glycosylase AlkD bound to a duocarmycin SA-adenine nucleobase adduct and DNA containing an abasic site
Classification: HYDROLASE/DNA/ANTIBIOTIC
Source organism: Bacillus cereus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2021-03-03
Authors: Mullins, E.A., Eichman, B.F.
PDB entry 7lxk: Ara h 1 leader sequence, Ara h 1.0101 (25-83) A25G
Classification: ALLERGEN
Source organism: Arachis hypogaea
Experimental method: SOLUTION NMR
Deposited: 2021-03-03
Authors: Mueller, G., London, R.
PDB entry 7lxl: Crystal structure of human CYP3A4 bound to the testosterone dimer
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2021-03-04
Authors: Sevrioukova, I.F.
PDB entry 7lxm: Cryo-EM structure of ConM SOSIP.v7 (ConM) in complex with bNAb PGT122
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2021-03-04
Authors: Martin, G.M., Ward, A.B., Sattentau, Q.J.
PDB entry 7lxn: Cryo-EM structure of EDC-crosslinked ConM SOSIP.v7 (ConM-EDC) in complex with bNAb PGT122
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2021-03-04
Authors: Martin, G.M., Ward, A.B., Sattentau, Q.J.
PDB entry 7lxp: Collagen Mimetic Peptide with an Xaa-position Aza-proline
Classification: BIOSYNTHETIC PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-03-04
Authors: Melton, S.D., Harris, T., Chenoweth, D.M.
PDB entry 7lxq: Collagen Mimetic Peptide with a Yaa-position Aza-proline
Classification: BIOSYNTHETIC PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2021-03-04
Authors: Melton, S.D., Harris, T., Chenoweth, D.M.
PDB entry 7lxr: Kinesin-like protein at 61F (Klp61f) bound to AMPPNP
Classification: CELL CYCLE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.744 Å
Deposited: 2021-03-04
Authors: Worthylake, D.K., Wojcik, E.J.
PDB entry 7lxs: Structural and Biochemical Insight into Assembly of Molecular Motors Involved in Viral DNA Packaging
Classification: VIRAL PROTEIN
Source organism: Bacteriophage sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2021-03-04
Authors: Ortega, M.E.
PDB entry 7lxt: Structure of Plasmodium falciparum 20S proteasome with bound bortezomib
Classification: HYDROLASE
Source organism: Plasmodium falciparum; Plasmodium falciparum (isolate 3D7)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-03-05
Authors: Morton, C.J., Metcalfe, R.D., Liu, B., Xie, S.C., Hanssen, E., Leis, A.P., Tilley, L., Griffin, M.D.W.
PDB entry 7lxu: Structure of Plasmodium falciparum 20S proteasome with bound MPI-5
Classification: HYDROLASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-03-05
Authors: Metcalfe, R.D., Morton, C.J., Xie, S.C., Liu, B., Hanssen, E., Leis, A.P., Tilley, L., Griffin, M.D.W.