LiteFold/PDB huggingface dataset:
PDB entry 7d6c: Crystal structure of CcmM N-terminal domain in complex with CcmN
Classification: STRUCTURAL PROTEIN
Source organism: Synechococcus elongatus (strain PCC 7942 / FACHB-805)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2020-09-30
Authors: Sun, H., Cui, N., Han, S.J., Chen, Z.P., Xia, L.Y., Chen, Y., Jiang, Y.L., Zhou, C.Z.
PDB entry 7d6d: Structural insights into membrane remodeling by SNX1
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 9 Å
Deposited: 2020-09-30
Authors: Zhang, Y., Pang, X., Sun, F.
PDB entry 7d6e: Structural insights into membrane remodeling by SNX1
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 10 Å
Deposited: 2020-09-30
Authors: Zhang, Y., Pang, X., Sun, F.
PDB entry 7d6f: The crystal structure of ARMS-PBM/MAGI2-PDZ4
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.001 Å
Deposited: 2020-09-30
Authors: Ye, J., Zhang, Y., Zhong, Z., Wang, C.
PDB entry 7d6g: Neutron crystal Structure of E.coli Dihydrofolate Reductase complexed with folate and NADP+ at pH4.5
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2020-09-30
Authors: Wan, Q., Dealwis, C.
PDB entry 7d6h: Crystal structure of the SARS-CoV-2 papain-like protease (PLPro) C112S mutant
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-09-30
Authors: Liu, J., Wang, Y., Pan, L.
PDB entry 7d6i: A neutralizing MAb targeting receptor-binding-domain of SARS-CoV-2
Classification: ANTIVIRAL PROTEIN,IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2020-09-30
Authors: Shi, R., Qi, J.X., Gao, G.F., Yan, J.H.
PDB entry 7d6j: Human serum albumin complexed with benzbromarone
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2020-09-30
Authors: Kawai, A., Yamasaki, K.
PDB entry 7d6l: Crystal structure of Trx2 from D. radiodurans R1
Classification: OXIDOREDUCTASE
Source organism: Deinococcus radiodurans R1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.947 Å
Deposited: 2020-09-30
Authors: Kim, M.-K., Zhang, J., Zhao, L.
PDB entry 7d6m: Crystal structure of tick-borne encephalitis virus methyltransferase
Classification: TRANSFERASE
Source organism: Tick-borne encephalitis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.894 Å
Deposited: 2020-10-01
Authors: Yang, J., Jing, X., Gong, P.
PDB entry 7d6n: Crystal structure of tick-borne encephalitis virus RNA-dependent RNA polymerase
Classification: TRANSFERASE
Source organism: Tick-borne encephalitis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.168 Å
Deposited: 2020-10-01
Authors: Yang, J., Jing, X., Gong, P.
PDB entry 7d6p: X-ray structure of the intermolecular complex of Clostridium perfringens sortase C with the C-terminal cell wall sorting signal motif.
Classification: TRANSFERASE
Source organism: Clostridium perfringens (strain SM101 / Type A)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2020-10-01
Authors: Kamitori, S., Tamai, E.
PDB entry 7d6q: Crystal structure of the Stx2a
Classification: TOXIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-10-01
Authors: Takahashi, M., Tamada, M., Hibino, M., Senda, M., Okuda, A., Miyazawa, A., Senda, T., Nishikawa, K.
PDB entry 7d6r: Crystal structure of the Stx2a complexed with MMA betaAla peptide
Classification: TOXIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-10-01
Authors: Takahashi, M., Tamada, M., Hibino, M., Senda, M., Okuda, A., Miyazawa, A., Senda, T., Nishikawa, K.
PDB entry 7d6t: X-ray structure of Clostridium perfringens sortase C with the C-terminal cell wall sorting motif.
Classification: TRANSFERASE
Source organism: Clostridium perfringens (strain SM101 / Type A)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2020-10-01
Authors: Kamitori, S., Tamai, E.
PDB entry 7d6v: Mycobacterium smegmatis Sdh1 in complex with UQ1
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2020-10-02
Authors: Zhou, X., Gao, Y., Wang, Q., Gong, H., Rao, Z.
PDB entry 7d6w: Crystal structure of Phycocyanin from Synechococcus sp. R42DM
Classification: PHOTOSYNTHESIS
Source organism: Synechococcus sp. R42DM
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-10-02
Authors: Patel, S.N., Sonani, R.R., Chaubey, M.G., Singh, N.K., Kumar, V., Madamwar, D.
PDB entry 7d6x: Mycobacterium smegmatis Sdh1 complex in the apo form
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2020-10-02
Authors: Zhou, X., Gao, Y., Wang, Q., Gong, H., Rao, Z.
PDB entry 7d6y: eIF4E in Complex with a Disulphide-Free Autonomous VH Domain
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.668 Å
Deposited: 2020-10-02
Authors: Brown, C.J., Frosi, Y., Jiang, S., Lin, Y.C.
PDB entry 7d6z: Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-10-02
Authors: Akbar, S., Bhakta, S., Sengupta, J.
PDB entry 7d72: Cryo-EM structures of human GMPPA/GMPPB complex bound to GDP-Mannose
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-10-02
Authors: Zheng, L., Liu, Z., Wang, Y., Yang, F., Wang, J., Qing, J., Cai, X., Mo, X., Gao, N., Jia, D.
PDB entry 7d73: Cryo-EM structure of GMPPA/GMPPB complex bound to GTP (State I)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-10-02
Authors: Zheng, L., Liu, Z., Wang, Y., Yang, F., Wang, J., Qing, J., Cai, X., Mo, X., Gao, N., Jia, D.
PDB entry 7d74: Cryo-EM structure of GMPPA/GMPPB complex bound to GTP (state II)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-10-02
Authors: Zheng, L., Liu, Z., Wang, Y., Yang, F., Wang, J., Qing, J., cai, X., Mo, X., Gao, N., Jia, D.
PDB entry 7d75: X-ray structure of a domain-swapped dimer of Monellin with YEDKG loop-1 mutant
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-10-03
Authors: Manjula, R., Ramaswamy, S., Gosavi, S.
PDB entry 7d76: Cryo-EM structure of the beclomethasone-bound adhesion receptor GPR97-Go complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-10-03
Authors: Ping, Y., Mao, C., Xiao, P., Zhao, R., Jiang, Y., Yang, Z., An, W., Shen, D., Yang, F., Zhang, H., Qu, C., Shen, Q., Tian, C., Li, Z., Li, S., Wang, G., Tao, X., Wen, X., Zhong, Y., Yang, J., Yi, F., Yu, X., Xu, E., Zhang, Y., Sun, J.
PDB entry 7d77: Cryo-EM structure of the cortisol-bound adhesion receptor GPR97-Go complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-10-03
Authors: Ping, Y., Mao, C., Xiao, P., Zhao, R., Jiang, Y., Yang, Z., An, W., Shen, D., Yang, F., Zhang, H., Qu, C., Shen, Q., Tian, C., Li, Z., Li, S., Wang, G., Tao, X., Wen, X., Zhong, Y., Yang, J., Yi, F., Yu, X., Xu, E., Zhang, Y., Sun, J.
PDB entry 7d78: The structure of thioesterase DcsB
Classification: HYDROLASE
Source organism: Beauveria bassiana (strain ARSEF 2860)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96543 Å
Deposited: 2020-10-03
Authors: Tang, Y., Zhou, J.H., Wang, G.Q.
PDB entry 7d79: The structure of DcsB complex with its substrate analogue
Classification: HYDROLASE
Source organism: Beauveria bassiana (strain ARSEF 2860)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.10411 Å
Deposited: 2020-10-03
Authors: Tang, Y., Zhou, J.H., Wang, G.Q.
PDB entry 7d7c: CryoEM structure of gp55-dependent RNA polymerase-promoter open complex
Classification: TRANSCRIPTION
Source organism: Escherichia coli; Escherichia coli 1-392-07_S4_C3; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-10-03
Authors: Shi, J., Wen, A., Jin, S., Feng, Y.
PDB entry 7d7d: CryoEM structure of gp45-dependent transcription activation complex
Classification: TRANSCRIPTION
Source organism: Enterobacteria phage T4; Escherichia coli; Escherichia coli 1-392-07_S4_C3; Escherichia virus T4; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2020-10-03
Authors: Shi, J., Wen, A., Jin, S., Feng, Y.
PDB entry 7d7e: Structure of PKD1L3-CTD/PKD2L1 in apo state
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-10-03
Authors: Su, Q., Chen, M., Li, B., Wang, Y., Jing, D., Zhan, X., Yu, Y., Shi, Y.
PDB entry 7d7f: Structure of PKD1L3-CTD/PKD2L1 in calcium-bound state
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-10-03
Authors: Su, Q., Shi, Y.G.
PDB entry 7d7k: The crystal structure of SARS-CoV-2 papain-like protease in apo form
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-10-04
Authors: Zhao, Y., Sun, L., Yang, H.T., Rao, Z.H.
PDB entry 7d7l: The crystal structure of SARS-CoV-2 papain-like protease in complex with YM155
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2020-10-04
Authors: Zhao, Y., Sun, L., Yang, H.T., Rao, Z.H.
PDB entry 7d7m: Cryo-EM Structure of the Prostaglandin E Receptor EP4 Coupled to G Protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-10-05
Authors: Nojima, S., Fujita, Y., Kimura, T.K., Nomura, N., Suno, R., Morimoto, K., Yamamoto, M., Noda, T., Iwata, S., Shigematsu, H., Kobayashi, T.
PDB entry 7d7n: Cryo-EM structure of human ABCB6 transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2020-10-05
Authors: Wang, C., Cao, C., Wang, N., Wang, X., Zhang, X.C.
PDB entry 7d7o: Crystal structure of cystathionine gamma-lyase from Bacillus cereus ATCC 14579
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2020-10-05
Authors: Sagong, H.-Y., Kim, B., Kim, K.-J.
PDB entry 7d7p: Crystal structure of the phosphodiesterase domain of Salpingoeca rosetta rhodopsin phosphodiesterase
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta (strain ATCC 50818 / BSB-021)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-10-05
Authors: Ikuta, T., Shihoya, W., Yamashita, K., Nureki, O.
PDB entry 7d7q: Crystal structure of the transmembrane domain and linker region of Salpingoeca rosetta rhodopsin phosphodiesterase
Classification: MEMBRANE PROTEIN
Source organism: Salpingoeca rosetta (strain ATCC 50818 / BSB-021)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2020-10-05
Authors: Ikuta, T., Shihoya, W., Yamashita, K., Nureki, O.
PDB entry 7d7r: Cryo-EM structure of the core domain of human ABCB6 transporter
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-10-05
Authors: Wang, C., Cao, C., Wang, N., Wang, X., Zhang, X.C.
PDB entry 7d7s: HIV-1 SF2 Nef in complex with the Fyn SH3 R96I mutant
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.32 Å
Deposited: 2020-10-05
Authors: Aldehaiman, A., Shahul Hamed, U.F., Arold, S.T.
PDB entry 7d7u: Crystal structure of Ago2 MID domain in complex with 8-Br-adenosin-5'-monophosphate
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-10-06
Authors: Suzuki, M., Takahashi, Y., Saito, J., Miyagi, H., Shinohara, F.
PDB entry 7d7v: Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+) and U1A protein
Classification: RNA
Source organism: Acidobacterium capsulatum ATCC 51196; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-10-06
Authors: Chen, H., Ren, A.M.
PDB entry 7d7w: Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.391 Å
Deposited: 2020-10-06
Authors: Chen, H., Ren, A.M.
PDB entry 7d7x: Crystal Structure of the Domain1 of NAD+ Riboswitch with adenosine diphosphate (ADP)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.631 Å
Deposited: 2020-10-06
Authors: Chen, H., Ren, A.M.
PDB entry 7d7y: Crystal Structure of the Domain1 of NAD+ Riboswitch with adenosine triphosphate (ATP)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-10-06
Authors: Chen, H., Ren, A.M.
PDB entry 7d7z: Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-10-06
Authors: Chen, H., Ren, A.M.
PDB entry 7d80: Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli (strain K12)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-10-06
Authors: Akbar, S., Bhakta, S., Sengupta, J.
PDB entry 7d81: Crystal Structure of the Domain2 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+)
Classification: RNA
Source organism: Acidobacteriaceae bacterium KBS 83
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-10-06
Authors: Chen, H., Ren, A.M.
PDB entry 7d82: Crystal Structure of the Domain2 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+
Classification: RNA
Source organism: Acidobacteriaceae bacterium KBS 83
Experimental method: X-RAY DIFFRACTION
Resolution: 2.489 Å
Deposited: 2020-10-06
Authors: Chen, H., Ren, A.M.
PDB entry 7d83: Crystal structure of HIV-1 integrase catalytic core domain in complex with 2-(tert-butoxy)-2-(2-(3-cyclohexylureido)-3,6-dimethyl-5-(5-methylchroman-6-yl)pyridin-4-yl)acetic acid
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate NY5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2020-10-07
Authors: Sugiyama, S., Sekiguchi, Y.
PDB entry 7d84: 34-fold symmetry Salmonella S ring formed by full-length FliF
Classification: MEMBRANE PROTEIN
Source organism: Salmonella enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-10-07
Authors: Kawamoto, A., Miyata, T., Makino, F., Kinoshita, M., Minamino, T., Imada, K., Kato, T., Namba, K.
PDB entry 7d85: Crystal structure of anti-ErbB3 Fab ISU104 in complex with human ErbB3 extracellular domain 3
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-10-07
Authors: Yoo, Y., Cho, H.S.
PDB entry 7d86: Crystal Structure of zebrafishPHF14-PZP
Classification: GENE REGULATION
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-10-07
Authors: Li, H., Zheng, S.
PDB entry 7d87: Crystal Structure of zebrafish PHF14-PZP in complex with H3(1-25)
Classification: GENE REGULATION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2020-10-07
Authors: Li, H., Zheng, S.
PDB entry 7d88: Crystal structure of a novel thermostable GH10 xylanase XynA
Classification: HYDROLASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34482 Å
Deposited: 2020-10-07
Authors: Xie, W., Yu, Q., Wang, C.
PDB entry 7d89: Crystal structure of an inactivated double mutant (E182AE280A) of a novel thermostable GH10 xylanase XynA
Classification: HYDROLASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89384 Å
Deposited: 2020-10-07
Authors: Xie, W., Yu, Q., Wang, C.
PDB entry 7d8a: Crystal Structure of H3(1-13)/PHF14-PZP fusion protein
Classification: GENE REGULATION
Source organism: Danio rerio; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-10-07
Authors: Li, H., Zheng, S.
PDB entry 7d8b: Engineering Disulphide-Free Autonomous Antibody VH Domains to modulate intracellular pathways
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2020-10-07
Authors: Frosi, Y., Lin, Y.C., Jiang, S., Brown, C.J.
PDB entry 7d8c: Crystal structure of the Cas12i1-crRNA binary complex
Classification: RNA BINDING PROTEIN
Source organism: Lachnospiraceae bacterium ND2006
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2020-10-07
Authors: Zhang, B., Luo, D.Y., Li, Y., OuYang, S.Y.
PDB entry 7d8d: The crystal structure of ScNTM1 in complex with SAH and Rps25a hexapeptide
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2020-10-08
Authors: Zhang, H.Y., Yue, J.
PDB entry 7d8e: Crystal Structure of double mutant Y115E Y117E human Secretory Glutaminyl Cyclase in complex with LSB-09
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-10-08
Authors: Dileep, K.V., Ihara, K., Sakai, N., Shirozu, M., Zhang, K.Y.J.
PDB entry 7d8f: The crystal structure of ScNTM1 in complex with SAH
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2020-10-08
Authors: Zhang, H.Y., Yue, J., Zhu, Z.L.
PDB entry 7d8g: The crystal structure of nucleotide phosphatase Sa1684 from Staphylococcus aureus
Classification: CYTOSOLIC PROTEIN
Source organism: Staphylococcus aureus subsp. aureus N315
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-10-08
Authors: Wang, Z., Li, X.
PDB entry 7d8h: CRTC1 pSer64 peptide in complex with 14-3-3 zeta
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2020-10-08
Authors: Chen, H., Zhang, H., Xiang, S.
PDB entry 7d8i: Crystal structure of nucleoside phosphatase Sa1684 complex with ATP analogue from staphylococus aureus
Classification: CYTOSOLIC PROTEIN
Source organism: Staphylococcus aureus subsp. aureus N315
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2020-10-08
Authors: Wang, Z., Li, X.
PDB entry 7d8j: S. aureus SsbB with 5-FU
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus (strain ED98)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2020-10-08
Authors: Lin, E.S., Huang, Y.H., Huang, C.Y.
PDB entry 7d8k: Solution structure of the methyl-CpG binding domain of MBD6 from Arabidopsis thaliana
Classification: DNA BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: SOLUTION NMR
Deposited: 2020-10-08
Authors: Mahana, Y., Ohki, I., Walinda, E., Morimoto, D., Sugase, K., Shirakawa, M.
PDB entry 7d8l: The structure of nucleoside phosphatase Sa1684 complex with GTP analogue from Staphylococcus aureus
Classification: CYTOSOLIC PROTEIN
Source organism: Staphylococcus aureus subsp. aureus N315
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-10-08
Authors: Wang, Z., Li, X.
PDB entry 7d8m: Crystal structure of DyP
Classification: OXIDOREDUCTASE
Source organism: Irpex lacteus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-10-08
Authors: He, C., Jia, R., Wang, T., Li, L.Q.
PDB entry 7d8n: Structure of the inactive form of wild-type peptidylarginine deiminase type III (PAD3) crystallized under the condition with high concentrations of Ca2+
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.753 Å
Deposited: 2020-10-08
Authors: Funabashi, K., Sawata, M., Unno, M.
PDB entry 7d8o: Crystal structure of E. coli ToxIN type III toxin-antitoxin complex
Classification: TOXIN/RNA
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.097 Å
Deposited: 2020-10-08
Authors: Manikandan, P., Rothweiler, U., Singh, M.
PDB entry 7d8p: CRTC1 pSer151 peptide in complex with 14-3-3 zeta
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-10-08
Authors: Chen, H., Zhang, H., Xiang, S.
PDB entry 7d8q: The structure of nucleotide phosphatase Sa1684 complex with GDP analogue from Staphylococcus aureus
Classification: CYTOSOLIC PROTEIN
Source organism: Staphylococcus aureus RF122
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-10-09
Authors: Wang, Z., Li, X.
PDB entry 7d8r: MITF HLHLZ structure
Classification: TRANSCRIPTION
Source organism: Aquifex aeolicus VF5; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-10-09
Authors: Guo, M., Fang, P., Wang, J.
PDB entry 7d8s: MITF bHLHLZ apo structure
Classification: TRANSCRIPTION
Source organism: Aquifex aeolicus VF5; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2020-10-09
Authors: Guo, M., Fang, P., Wang, J.
PDB entry 7d8t: MITF bHLHLZ complex with M-box DNA
Classification: TRANSCRIPTION/DNA
Source organism: Aquifex aeolicus VF5; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.201 Å
Deposited: 2020-10-09
Authors: Guo, M., Fang, P., Wang, J.
PDB entry 7d8u: Crystal structure of the C-terminal domain of pNP868R from African swine fever virus
Classification: TRANSFERASE
Source organism: African swine fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-10-10
Authors: Du, X., Geng, Z., Zhang, H.
PDB entry 7d8v: Crystal Structure of A Kinesin-3 KIF13B mutant-T192Y
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-10-10
Authors: Ren, J.Q., Feng, W.
PDB entry 7d8x: CryoEM structure of human gamma-secretase in complex with E2012 and L685458
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2020-10-11
Authors: Yang, G., Zhou, R., Guo, X., Lei, J., Yan, C., Shi, Y.
PDB entry 7d8z: human potassium-chloride co-transporter KCC2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-10-11
Authors: Xie, Y., Chang, S., Zhao, C., Ye, S., Guo, J.
PDB entry 7d90: human potassium-chloride co-transporter KCC3
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-10-12
Authors: Xie, Y., Chang, S., Zhao, C., Ye, S., Guo, J.
PDB entry 7d91: Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ (P4(3)2(1)2 symmetry)
Classification: TRANSPORT PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2020-10-12
Authors: Kanai, R., Cornelius, F., Ogawa, H., Motoyama, K., Vilsen, B., Toyoshima, C.
PDB entry 7d92: Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ and anthroylouabain (P4(3)2(1)2 symmetry)
Classification: TRANSPORT PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2020-10-12
Authors: Kanai, R., Cornelius, F., Ogawa, H., Motoyama, K., Vilsen, B., Toyoshima, C.
PDB entry 7d93: Crystal Structure of the Na+,K+-ATPase in the E2P state with bound Mg2+ and anthroylouabain (P2(1)2(1)2(1) symmetry)
Classification: TRANSPORT PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.65 Å
Deposited: 2020-10-12
Authors: Kanai, R., Cornelius, F., Ogawa, H., Motoyama, K., Vilsen, B., Toyoshima, C.
PDB entry 7d94: Crystal Structure of the Na+,K+-ATPase in the E2P state with bound one Mg2+ and one Rb+ in the presence of bufalin
Classification: TRANSPORT PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2020-10-12
Authors: Kanai, R., Cornelius, F., Ogawa, H., Motoyama, K., Vilsen, B., Toyoshima, C.
PDB entry 7d95: Crystal structure of acivicin-bound GATase subunit of Methanocaldococcus jannaschii GMP synthetase
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2020-10-12
Authors: Bellur, A., Dongre, A., Kumar, S., Balaram, H.
PDB entry 7d96: Crystal structure of D110G mutant of GATase subunit of Methanocaldococcus jannaschii GMP synthetase
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2020-10-12
Authors: Bellur, A., Dongre, A., Aggarwal, R., Balaram, H.
PDB entry 7d97: Crystal structure of N109P mutant of GATase subunit of Methanocaldococcus jannaschii GMP synthetase
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2020-10-12
Authors: Bellur, A., Dongre, A., Kavya, J., Balaram, H.
PDB entry 7d98: Crystal structure of full-length CbnR complexed with the target DNA complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Cupriavidus necator; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2020-10-12
Authors: Senda, M., Giannopoulou, E., Senda, T.
PDB entry 7d99: human potassium-chloride co-transporter KCC4
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-10-12
Authors: Xie, Y., Chang, S., Zhao, C., Ye, S., Guo, J.
PDB entry 7d9b: Crystal structure of alpha-glucosidase
Classification: HYDROLASE
Source organism: Weissella cibaria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-10-12
Authors: Krusong, K., Wangpaiboon, K., Kim, S., Mori, T., Hakoshima, T.
PDB entry 7d9c: Alpha-glucosidase from Weissella cibaria BBK-1 bound with maltose
Classification: HYDROLASE
Source organism: Weissella confusa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2020-10-13
Authors: Krusong, K., Wangpaiboon, K., Kim, S., Mori, T., Hakoshima, T.
PDB entry 7d9e: Gamma-glutamyltranspeptidase from Pseudomonas nitroreducens complexed with L-DON
Classification: TRANSFERASE
Source organism: Pseudomonas nitroreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-10-13
Authors: Hibi, T., Sano, C., Itoh, T., Wakayama, M.
PDB entry 7d9f: SpdH Spermidine dehydrogenase SeMet Structure
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-10-13
Authors: Che, S., Zhang, Q., Bartlam, M.
PDB entry 7d9g: SpdH Spermidine dehydrogenase native structure
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-10-13
Authors: Che, S., Zhang, Q., Bartlam, M.
PDB entry 7d9h: SpdH Spermidine dehydrogenase N33 truncation structure
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2020-10-13
Authors: Che, S., Zhang, Q., Bartlam, M.
PDB entry 7d9i: SpdH Spermidine dehydrogenase D282A mutant
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-10-13
Authors: Che, S., Zhang, Q., Bartlam, M.
PDB entry 7d9j: SpdH Spermidine dehydrogenase Y443A mutant
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2020-10-13
Authors: Che, S., Zhang, Q., Bartlam, M.
PDB entry 7d9k: DNA binding domain of human DNA Ligase IV - Wild type
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-10-13
Authors: Maddi, E.R., Raghavan, S.C., Natesh, R.
PDB entry 7d9l: Crystal structure of E. coli Grx2: Enzyme inhibited state in complex with Zinc and glutathione sulfinic acid
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2020-10-13
Authors: Sreekumar, S.N., Arockiasamy, A.
PDB entry 7d9m: grass carp interleukin-2
Classification: CYTOKINE
Source organism: Ctenopharyngodon idella
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2020-10-13
Authors: Junya, w., Jun, z.
PDB entry 7d9n: Crystal structure of a non-canonic progeria mutation S143F at lamin A/C and its structural implication to the premature aging
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2020-10-14
Authors: Ahn, J., Jung, S., Ha, N.
PDB entry 7d9o: Crystal Structure of Recombinant Human Acetylcholinesterase in Complex with Compound 2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2020-10-14
Authors: Liu, Q.F., Yin, W.C.
PDB entry 7d9p: Crystal Structure of Recombinant Human Acetylcholinesterase in Complex with Compound 12
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2020-10-14
Authors: Liu, Q.F., Yin, W.C.
PDB entry 7d9q: Crystal Structure of Recombinant Human Acetylcholinesterase in Complex with Compound 7
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2020-10-14
Authors: Liu, Q.F., Yin, W.C.
PDB entry 7d9r: Structure of huamn soluble guanylate cyclase in the riociguat and NO-bound state
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-10-14
Authors: Chen, L., Liu, R., Kang, Y.
PDB entry 7d9s: Structure of huamn soluble guanylate cyclase in the YC1 and NO-bound state
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-10-14
Authors: Chen, L., Liu, R., Kang, Y.
PDB entry 7d9t: Structure of human soluble guanylate cyclase in the cinciguat-bound inactive state
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-10-14
Authors: Chen, L., Liu, R., Kang, Y.
PDB entry 7d9u: Structure of human soluble guanylate cyclase in the cinciguat-bound activated state
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-10-14
Authors: Chen, L., Liu, R., Kang, Y.
PDB entry 7d9v: CRTC1 pSer245 peptide in complex with 14-3-3 zeta
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2020-10-14
Authors: Chen, H., Zhang, H., Xiang, S.
PDB entry 7d9w: Gamma-glutamyltranspeptidase from Pseudomonas nitroreducens complexed with L-DON
Classification: TRANSFERASE
Source organism: Pseudomonas nitroreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-10-14
Authors: Hibi, T., Sano, C., Putthapong, P., Hayashi, J., Itoh, T., Wakayama, M.
PDB entry 7d9x: Highly active mutant W525D of Gamma-glutamyltranspeptidase from Pseudomonas nitroreducens
Classification: TRANSFERASE
Source organism: Pseudomonas nitroreducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2020-10-14
Authors: Hibi, T., Sano, C., Itoh, T., Wakayama, M.
PDB entry 7d9y: DNA binding domain of human DNA Ligase IV mutant - A3V
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2020-10-14
Authors: Maddi, E.R., Raghavan, S.C., Natesh, R.
PDB entry 7d9z: Crystal structure of anti-basigin Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.123 Å
Deposited: 2020-10-14
Authors: Sakuragi, T., Kanai, R., Narita, H., Onishi, E., Miyazaki, T., Baba, T., Nakagawa, A., Toyoshima, C., Nagata, S.
PDB entry 7da0: High-resolution crystal structure of the chicken MHF complex
Classification: DNA BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2020-10-14
Authors: Ito, S., Nishino, T.
PDB entry 7da1: Crystal structure of the chicken MHF complex
Classification: DNA BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2020-10-14
Authors: Ito, S., Nishino, T.
PDB entry 7da2: The crystal structure of the chicken FANCM-MHF complex
Classification: DNA BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2020-10-14
Authors: Nishino, T., Ito, S.
PDB entry 7da4: Cryo-EM structure of amyloid fibril formed by human RIPK3
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.24 Å
Deposited: 2020-10-14
Authors: Zhao, K., Ma, Y.Y., Sun, Y.P., Li, D., Liu, C.
PDB entry 7da5: Cryo-EM structure of the human MCT1 D309N mutant in complex with Basigin-2 in the inward-open conformation.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-10-14
Authors: Wang, N., Jiang, X., Zhang, S., Zhu, A., Yuan, Y., Lei, J., Yan, C.
PDB entry 7da6: Enterovirus 71 2A Protease mutant- C110A in complex with peptide inhibitor
Classification: VIRAL PROTEIN
Source organism: Human enterovirus 71; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-10-15
Authors: Yang, W.Z., Yuan, H.S.
PDB entry 7da7: Mouse Toll-like receptor 3 ectodomain in complex with lncRNA Rmrp in elongated form
Classification: RNA BINDING PROTEIN/RNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2020-10-15
Authors: Li, B., Cao, X.
PDB entry 7da8: X-ray structure of a GB1:T2Q/D46K mutant
Classification: PROTEIN BINDING
Source organism: Streptococcus sp. group G
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-10-15
Authors: Manjula, R., Ramaswamy, S., Gosavi, S.
PDB entry 7da9: Structure of 6-hydroxy-3-succinoyl-pyridine 3-monooxygenase (HspB) from Pseudomonas putida S16
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida S16
Experimental method: X-RAY DIFFRACTION
Resolution: 2.108 Å
Deposited: 2020-10-15
Authors: Liu, G.Q., Liu, G.Q.
PDB entry 7daa: Crystal structure of basigin complexed with anti-basigin Fab fragment
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2020-10-16
Authors: Sakuragi, T., Kanai, R., Narita, H., Onishi, E., Miyazaki, T., Baba, T., Nakagawa, A., Toyoshima, C., Nagata, S.
PDB entry 7dab: plant peptide hormone
Classification: PLANT PROTEIN
Source organism: Zea mays
Experimental method: SOLUTION NMR
Deposited: 2020-10-16
Authors: Umetsu, Y., Ohki, S.
PDB entry 7dac: Human RIPK3 amyloid fibril revealed by solid-state NMR
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: SOLID-STATE NMR
Deposited: 2020-10-16
Authors: Wu, X.L., Zhang, J., Dong, X.Q., Liu, J., Li, B., Hu, H., Wang, J., Wang, H.Y., Lu, J.X.
PDB entry 7dad: EPD in complex with tubulin
Classification: CELL CYCLE
Source organism: Gallus gallus; Mus musculus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2020-10-16
Authors: Wang, Y., Wu, C.
PDB entry 7dae: EPB in complex with tubulin
Classification: CELL CYCLE
Source organism: Gallus gallus; Mus musculus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.394 Å
Deposited: 2020-10-16
Authors: Wu, C., Wang, Y.
PDB entry 7daf: IXA in complex with tubulin
Classification: CELL CYCLE
Source organism: Gallus gallus; Mus musculus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-10-16
Authors: Wu, C., Wang, Y.
PDB entry 7dag: Vibrio cholera aldehyde-alcohol dehrogenase
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.37 Å
Deposited: 2020-10-16
Authors: Cho, S., Cho, C., Song, J., Kim, G.
PDB entry 7dah: Adenosine triphosphate phosphoribosyltransferase from Vibrio cholerae in complex with ATP and PRPP
Classification: TRANSFERASE
Source organism: Vibrio cholerae serotype O1 (strain M66-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2020-10-16
Authors: Pal, R.K., Gourinath, S., Biswal, B.K.
PDB entry 7dai: The crystal structure of a serotonin N-acetyltransferase from Oryza Sativa
Classification: TRANSFERASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-10-16
Authors: Zhou, Y.Z., Liao, L.J., Tang, T., Guo, Y., Liu, X.K., Liu, B., Zhao, Y.C.
PDB entry 7daj: The crystal structure of serotonin N-acetyltransferase in complex with acetyl-CoA from Oryza Sativa
Classification: TRANSFERASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-10-16
Authors: Zhou, Y.Z., Liao, L.J., Tang, T., Guo, Y., Liu, X.K., Liu, B., Zhao, Y.C.
PDB entry 7dak: The crystal structure of a serotonin N-acetyltransferase in complex with 5-Methoxytryptamine and acetyl-CoA from Oryza Sativa
Classification: TRANSFERASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-10-16
Authors: Zhou, Y.Z., Liao, L.J., Tang, T., Guo, Y., Liu, X.K., Liu, B., Zhao, Y.C.
PDB entry 7dal: The crystal structure of a serotonin N-acetyltransferase in complex with serotonin and acetyl-CoA from Oryza Sativa
Classification: TRANSFERASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-10-16
Authors: Zhou, Y.Z., Liao, L.J., Tang, T., Guo, Y., Liu, X.K., Liu, B., Zhao, Y.C.
PDB entry 7dam: Adenosine triphosphate phosphoribosyltransferase from Vibrio cholerae
Classification: TRANSFERASE
Source organism: Vibrio cholerae serotype O1 (strain M66-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-10-16
Authors: Pal, R.K., Gourinath, S., Biswal, B.K.
PDB entry 7dan: Structure of the Ca2+-bound wild-type peptidylarginine deiminase type III (PAD3)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2020-10-16
Authors: Sawata, M., Unno, M.
PDB entry 7dao: Crystal structure of native yak lactoperoxidase at 2.28 A resolution
Classification: OXIDOREDUCTASE
Source organism: Bos mutus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2020-10-16
Authors: Singh, P.K., Ahmad, N., Rani, C., Sharma, P., Sharma, S., Singh, T.P.
PDB entry 7das: Mouse Toll-like receptor 3 ectodomain in complex with lncRNA Rmrp in lapped form
Classification: RNA BINDING PROTEIN/RNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2020-10-18
Authors: Li, B., Cao, X.
PDB entry 7dat: The crystal structure of COVID-19 main protease treated by AF
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2020-10-18
Authors: He, Z.S., He, B., Cao, P., Jiang, H.D., Gong, Y., Gao, X.Y.
PDB entry 7dau: The crystal structure of COVID-19 main protease treated by GA
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2020-10-18
Authors: He, Z.S., He, B., Cao, P., Jiang, H.D., Gong, Y., Gao, X.Y.
PDB entry 7dav: The native crystal structure of COVID-19 main protease
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-10-18
Authors: He, Z.S., He, B., Cao, P., Jiang, H.D., Gong, Y., Gao, X.Y.
PDB entry 7daw: Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase
Classification: LIGASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2020-10-18
Authors: Xu, M., Zhang, X., Xu, L., Chen, S.
PDB entry 7dax: Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP013-bound form
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.70001 Å
Deposited: 2020-10-18
Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.
PDB entry 7day: Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP013-, and GSH-bound form
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2020-10-18
Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.
PDB entry 7daz: Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP015- and GSH-bound form
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-10-18
Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.
PDB entry 7db0: Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in dimedone-bound form
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2020-10-18
Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.
PDB entry 7db1: Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in dimedone- and glutathione-bound form
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-10-18
Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.
PDB entry 7db2: Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in GS-dimedone-bound form
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-10-18
Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.
PDB entry 7db3: Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP011-bound form
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-10-18
Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.
PDB entry 7db4: Crystal structure of Drosophila melanogaster Noppera-bo, glutathione S-transferase epsilon 14 (DmGSTE14), in TDP012- and glutathione-bound form
Classification: TRANSFERASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2020-10-18
Authors: Koiwai, K., Inaba, K., Yumoto, F., Senda, T., Niwa, R.
PDB entry 7db5: Crystal structure of alpha-L-fucosidase from Vibrio sp. strain EJY3
Classification: HYDROLASE
Source organism: Vibrio sp. EJY3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-10-19
Authors: Hong, H., Kim, K.-J.
PDB entry 7db6: human melatonin receptor MT1 - Gi1 complex
Classification: SIGNALING PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus; Rattus rattus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-10-19
Authors: Okamoto, H.H., Kusakizako, T., Shihioya, W., Yamashita, K., Nishizawa, T., Nureki, O.
PDB entry 7db7: Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase in complex with compound GDI05-001
Classification: LIGASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2020-10-19
Authors: Xu, M., Zhang, X., Xu, L., Chen, S.
PDB entry 7db8: Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase in complex with compound PF-3845
Classification: LIGASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-10-19
Authors: Xu, M., Zhang, X., Xu, L., Chen, S.
PDB entry 7db9: IC1 in complex with tubulin
Classification: CELL CYCLE
Source organism: Gallus gallus; Mus musculus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.845 Å
Deposited: 2020-10-19
Authors: Wu, C.Y., Wang, Y.X.
PDB entry 7dba: RYX in complex with tubulin
Classification: CELL CYCLE
Source organism: Gallus gallus; Mus musculus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.461 Å
Deposited: 2020-10-19
Authors: Wu, C.Y., Wang, Y.X.
PDB entry 7dbb: SSE in complex with tubulin
Classification: CELL CYCLE
Source organism: Gallus gallus; Mus musculus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.805 Å
Deposited: 2020-10-19
Authors: Wu, C.Y., Wang, Y.X.
PDB entry 7dbc: PRA in complex with tubulin
Classification: CELL CYCLE
Source organism: Gallus gallus; Mus musculus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-10-19
Authors: Wu, C.Y., Wang, Y.X.
PDB entry 7dbd: 444 in complex with tubulin
Classification: CELL CYCLE
Source organism: Gallus gallus; Mus musculus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 3.094 Å
Deposited: 2020-10-19
Authors: Wu, C.Y., Wang, Y.X.
PDB entry 7dbe: Structure of a novel transaminase
Classification: TRANSFERASE
Source organism: Rhodobacter sp. 140A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-10-20
Authors: Li, F.L., Yu, H.M.