LiteFold/PDB huggingface dataset:
PDB entry 1y58: The structure of a lactoferricinB derivative bound to micelles
Classification: TRANSPORT PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2004-12-02
Authors: Nguyen, L.T., Schibli, D.J., Vogel, H.J.
PDB entry 1y59: Dianhydrosugar-based benzamidine, factor Xa specific inhibitor in complex with bovine trypsin mutant
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2004-12-02
Authors: Di Fenza, A., Heine, A., Klebe, G.
PDB entry 1y5a: Dianhydrosugar-based benzamidine, factor Xa specific inhibitor in complex with bovine trypsin mutant
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2004-12-02
Authors: Di Fenza, A., Heine, A., Klebe, G.
PDB entry 1y5b: Dianhydrosugar-based benzamidine, factor Xa specific inhibitor in complex with bovine trypsin mutant
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2004-12-02
Authors: Di Fenza, A., Heine, A., Klebe, G.
PDB entry 1y5c: The structure of a lactoferricinB derivative bound to micelles (LfcinB4-14)
Classification: TRANSPORT PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2004-12-02
Authors: Nguyen, L.T., Schibli, D.J., Vogel, H.J.
PDB entry 1y5e: Crystal structure of Molybdenum cofactor biosynthesis protein B
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-02
Authors: Chang, C., Zhou, M., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y5f: T-To-T(High) quaternary transitions in human hemoglobin: betaL96A deoxy low-salt (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2004-12-02
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y5h: Crystal structure of truncated Se-Met Hypoxic Response Protein I (HRPI)
Classification: UNKNOWN FUNCTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2004-12-02
Authors: Sharpe, M.L., Baker, E.N., Lott, J.S.
PDB entry 1y5i: The crystal structure of the NarGHI mutant NarI-K86A
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-02
Authors: Bertero, M.G., Rothery, R.A., Boroumand, N., Palak, M., Blasco, F., Ginet, N., Weiner, J.H., Strynadka, N.C.J.
PDB entry 1y5j: T-To-T(High) quaternary transitions in human hemoglobin: betaH97A deoxy low-salt (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2004-12-02
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y5k: T-To-T(High) quaternary transitions in human hemoglobin: betaD99A deoxy low-salt (10 test sets)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-12-02
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y5l: The crystal structure of the NarGHI mutant NarI-H66Y
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-02
Authors: Bertero, M.G., Rothery, R.A., Boroumand, N., Palak, M., Blasco, F., Ginet, N., Weiner, J.H., Strynadka, N.C.J.
PDB entry 1y5m: The crystal structure of murine 11b-hydroxysteroid dehydrogenase: an important therapeutic target for diabetes
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-02
Authors: Zhang, J., Osslund, T.D., Plant, M.H., Clogston, C.L., Nybo, R.E., Xiong, F., Delaney, J.M., Jordan, S.R.
PDB entry 1y5n: The crystal structure of the NarGHI mutant NarI-K86A in complex with pentachlorophenol
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-02
Authors: Bertero, M.G., Rothery, R.A., Boroumand, N., Palak, M., Blasco, F., Ginet, N., Weiner, J.H., Strynadka, N.C.J.
PDB entry 1y5o: NMR structure of the amino-terminal domain from the Tfb1 subunit of yeast TFIIH
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR
Deposited: 2004-12-02
Authors: Di Lello, P., Nguyen, B.D., Jones, T.N., Potempa, K., Kobor, M.S., Legault, P., Omichinski, J.G.
PDB entry 1y5r: The crystal structure of murine 11b-hydroxysteroid dehydrogenase complexed with corticosterone
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2004-12-02
Authors: Zhang, J., Osslund, T.D., Plant, M.H., Clogston, C.L., Nybo, R.E., Xiong, F., Delaney, J.M., Jordan, S.
PDB entry 1y5u: Dianhydrosugar-based benzamidine, factor Xa specific inhibitor in complex with bovine trypsin mutant
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-03
Authors: Di Fenza, A., Heine, A., Klebe, G.
PDB entry 1y5v: tRNA-Guanine Transglycosylase (TGT) in complex with 6-Amino-4-(2-phenylethyl)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2004-12-03
Authors: Stengl, B., Meyer, E.A., Heine, A., Brenk, R., Diederich, F., Klebe, G.
PDB entry 1y5w: tRNA-guanine Transglycosylase (TGT) in complex with 6-Amino-4-[2-(4-methylphenyl)ethyl]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2004-12-03
Authors: Stengl, B., Meyer, E.A., Heine, A., Brenk, R., Diederich, F., Klebe, G.
PDB entry 1y5x: tRNA-guanine Transglycosylase (TGT) in complex with 6-Amino-4-[2-(4-methoxyphenyl)ethyl]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-12-03
Authors: Stengl, B., Meyer, E.A., Heine, A., Brenk, R., Diederich, F., Klebe, G.
PDB entry 1y5y: Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1
Classification: LYASE
Source organism: Methylobacterium extorquens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-12-03
Authors: Acharya, P., Goenrich, M., Hagemeier, C.H., Demmer, U., Vorholt, J.A., Thauer, R.K., Ermler, U.
PDB entry 1y60: Structure of the tetrahydromethanopterin dependent formaldehyde-activating enzyme (Fae) from Methylobacterium extorquens AM1 with bound 5,10-methylene tetrahydromethanopterin
Classification: LYASE
Source organism: Methylobacterium extorquens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-03
Authors: Acharya, P., Goenrich, M., Hagemeier, C.H., Demmer, U., Vorholt, J.A., Thauer, R.K., Ermler, U.
PDB entry 1y62: A 2.4 crystal structure of conkunitzin-S1, a novel Kunitz-fold cone snail neurotoxin.
Classification: TOXIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2004-12-03
Authors: Dy, C.Y., Buczek, P., Horvath, M.P.
PDB entry 1y63: Initial crystal structural analysis of a probable kinase from Leishmania major Friedlin
Classification: Structural Genomics, Unknown Function
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-12-03
Authors: Robien, M.A., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
PDB entry 1y64: Bni1p Formin Homology 2 Domain complexed with ATP-actin
Classification: STRUCTURAL PROTEIN
Source organism: Oryctolagus cuniculus; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2004-12-03
Authors: Otomo, T., Tomchick, D.R., Otomo, C., Panchal, S.C., Machius, M., Rosen, M.K.
PDB entry 1y65: Crystal structure of beta-hexosaminidase from Vibrio cholerae in complex with N-acetyl-D-glucosamine to a resolution of 1.85
Classification: HYDROLASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2004-12-03
Authors: Gorman, J., Shapiro, L., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1y66: Dioxane contributes to the altered conformation and oligomerization state of a designed engrailed homeodomain variant
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2004-12-03
Authors: Hom, G.K., Lassila, J.K., Thomas, L.M., Mayo, S.L.
PDB entry 1y67: Crystal Structure of Manganese Superoxide Dismutase from Deinococcus radiodurans
Classification: OXIDOREDUCTASE
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.853 Å
Deposited: 2004-12-03
Authors: Chan, S., Tanaka, S., Sawaya, M.R., Perry, L.J.
PDB entry 1y69: RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans
Classification: RIBOSOME
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422); Deinococcus radiodurans R1; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.33 Å
Deposited: 2004-12-04
Authors: Wilson, D.N., Schluenzen, F., Harms, J.M., Yoshida, T., Ohkubo, T., Albrecht, R., Buerger, J., Kobayashi, Y., Fucini, P.
PDB entry 1y6a: Crystal structure of VEGFR2 in complex with a 2-anilino-5-aryl-oxazole inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-12-05
Authors: Harris, P.A., Cheung, M., Hunter, R.N., Brown, M.L., Veal, J.M., Nolte, R.T., Wang, L., Liu, W., Crosby, R.M., Johnson, J.H., Epperly, A.H., Kumar, R., Luttrell, D.K., Stafford, J.A.
PDB entry 1y6b: Crystal structure of VEGFR2 in complex with a 2-anilino-5-aryl-oxazole inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-12-05
Authors: Harris, P.A., Cheung, M., Hunter, R.N., Brown, M.L., Veal, J.M., Nolte, R.T., Wang, L., Liu, W., Crosby, R.M., Johnson, J.H., Epperly, A.H., Kumar, R., Luttrell, D.K., Stafford, J.A.
PDB entry 1y6d: Solution structure and dynamics of LuxU from Vibrio harveyi, a phosphotransferase protein involved in bacterial quorum sensing
Classification: TRANSFERASE
Source organism: Vibrio harveyi
Experimental method: SOLUTION NMR
Deposited: 2004-12-06
Authors: Ulrich, D.L., Kojetin, D., Bassler, B.L., Cavanagh, J., Loria, J.P.
PDB entry 1y6e: Orthorhombic glutathione S-transferase of Schistosoma japonicum
Classification: TRANSFERASE
Source organism: Schistosoma japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2004-12-06
Authors: Rufer, A.C., Thiebach, L., Baer, K., Klein, H.W., Hennig, M.
PDB entry 1y6f: alpha-glucosyltransferase in complex with UDP-glucose and DNA containing an abasic site
Classification: TRANSFERASE/DNA
Source organism: Enterobacteria phage T4; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-06
Authors: Lariviere, L., Sommer, N., Morera, S.
PDB entry 1y6g: alpha-glucosyltransferase in complex with UDP and a 13_mer DNA containing a HMU base at 2.8 A resolution
Classification: TRANSFERASE/DNA
Source organism: Enterobacteria phage T4; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-12-06
Authors: Lariviere, L., Sommer, N., Morera, S.
PDB entry 1y6h: Crystal structure of LIPDF
Classification: HYDROLASE
Source organism: Leptospira interrogans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-12-06
Authors: Zhou, Z., Song, X., Li, Y., Gong, W.
PDB entry 1y6i: Synechocystis GUN4
Classification: LIGAND BINDING PROTEIN
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2004-12-06
Authors: Verdecia, M.A., Larkin, R.M., Ferrer, J.L., Riek, R., Chory, J., Noel, J.P.
PDB entry 1y6j: L-Lactate Dehydrogenase from Clostridium Thermocellum Cth-1135
Classification: OXIDOREDUCTASE
Source organism: Clostridium thermocellum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2004-12-06
Authors: Chen, L., Yang, H., Kataeva, I., Chen, L.R., Tempel, W., Lee, D., Habel, J., Zhou, W., Lin, D., Ljungdahl, L., Liu, Z.-J., Rose, J., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1y6k: Crystal structure of human IL-10 complexed with the soluble IL-10R1 chain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2004-12-06
Authors: Yoon, S.I., Jones, B.C., Josepson, K., Logsdon, N.J., Walter, M.R.
PDB entry 1y6l: Human ubiquitin conjugating enzyme E2E2
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2004-12-06
Authors: Walker, J.R., Avvakumov, G.V., Newman, E.M., Mackenzie, F., Kozieradzki, I., Bochkarev, A., Sundstrom, M., Arrowsmith, C., Edwards, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 1y6m: Crystal structure of Epstein-Barr virus IL-10 complexed with the soluble IL-10R1 chain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human herpesvirus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-12-06
Authors: Yoon, S.I., Jones, B.C., Logsdon, N.J., Walter, M.R.
PDB entry 1y6n: Crystal structure of Epstein-Barr virus IL-10 mutant (A87I) complexed with the soluble IL-10R1 chain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human herpesvirus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2004-12-06
Authors: Yoon, S.I., Jones, B.C., Logsdon, N.J., Walter, M.R.
PDB entry 1y6o: Crystal structure of disulfide engineered porcine pancreatic phospholipase A2 to group-X isozyme in complex with inhibitor MJ33 and phosphate ions
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-12-06
Authors: Yu, B.Z., Pan, Y.H., Jassen, M.J.W., Bahnson, B.J., Jain, M.K.
PDB entry 1y6p: Crystal structure of disulfide engineered porcine pancratic phospholipase a2 to group-x isozyme
Classification: HYDROLASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2004-12-06
Authors: Yu, B.Z., Pan, Y.H., Jassen, M.J.W., Bahnson, B.J., Jain, M.K.
PDB entry 1y6q: Cyrstal structure of MTA/AdoHcy nucleosidase complexed with MT-DADMe-ImmA
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-12-06
Authors: Lee, J.E., Singh, V., Evans, G.B., Tyler, P.C., Furneaux, R.H., Cornell, K.A., Riscoe, M.K., Schramm, V.L., Howell, P.L.
PDB entry 1y6r: Crystal structure of MTA/AdoHcy nucleosidase complexed with MT-ImmA.
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-12-06
Authors: Lee, J.E., Singh, V., Evans, G.B., Tyler, P.C., Furneaux, R.H., Cornell, K.A., Riscoe, M.K., Schramm, V.L., Howell, P.L.
PDB entry 1y6s: HIV-1 DIS(Mal) duplex Ba-soaked
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-12-07
Authors: Ennifar, E., Walter, P., Dumas, P.
PDB entry 1y6t: HIV-1 Dis(Mal) Duplex Co Hexamine-Soaked
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-12-07
Authors: Ennifar, E., Walter, P., Dumas, P.
PDB entry 1y6u: The Structure of the Excisionase (Xis) Protein from Conjugative Transposon Tn916 Provides Insights into the Regulation of Heterobivalent Tyrosine Recombinases
Classification: DNA BINDING PROTEIN
Source organism: Enterococcus faecalis
Experimental method: SOLUTION NMR
Deposited: 2004-12-07
Authors: Abbani, M., Iwahara, M., Clubb, R.T.
PDB entry 1y6v: Structure of E. coli Alkaline Phosphatase in presence of cobalt at 1.60 A resolution
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-07
Authors: Wang, J., Stieglitz, K., Kantrowitz, E.R.
PDB entry 1y6w: Trapped intermediate of calmodulin
Classification: Calcium-Binding Protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-07
Authors: Grabarek, Z.
PDB entry 1y6x: The 1.25 A resolution structure of phosphoribosyl-ATP pyrophosphohydrolase from Mycobacterium tuberculosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2004-12-07
Authors: Javid-Majd, F., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 1y6z: Middle domain of Plasmodium falciparum putative heat shock protein PF14_0417
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2004-12-07
Authors: Lunin, V.V., Botchkareva, E., Loppnau, P., Amani, M., Bray, J., Vedadi, M., Edwards, A., Arrowsmith, C., Sundstrom, M., Bochkarev, A., Hui, R., Plotnikova, O., Structural Genomics Consortium (SGC)
PDB entry 1y71: X-ray crystal structure of kinase-associated protein B from Bacillus cereus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2004-12-07
Authors: Osipiuk, J., Zhou, M., Moy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y73: HIV-1 Dis(Mal) Duplex Pt-Soaked
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-12-08
Authors: Ennifar, E., Walter, P., Dumas, P.
PDB entry 1y74: Solution Structure of mLin-2/mLin-7 L27 Domain Complex
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2004-12-08
Authors: Feng, W., Long, J.-F., Zhang, M.
PDB entry 1y75: A new form of catalytically inactive phospholipase A2 with an unusual disulphide bridge Cys 32- Cys 49 reveals recognition for N-acetylglucosmine
Classification: HYDROLASE
Source organism: Naja sagittifera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-08
Authors: Jabeen, T., Singh, N., Jasti, J., Singh, R.K., Sharma, S., Perbandt, M., Betzel, C., Kaur, P., Srinivasan, A., Singh, T.P.
PDB entry 1y76: Solution Structure of Patj/Pals1 L27 Domain Complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: SOLUTION NMR
Deposited: 2004-12-08
Authors: Feng, W., Long, J.-F., Zhang, M.
PDB entry 1y77: Complete RNA Polymerase II elongation complex with substrate analogue GMPCPP
Classification: TRANSCRIPTION,TRANSFERASE/DNA-RNA HYBRID
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.5 Å
Deposited: 2004-12-08
Authors: Kettenberger, H., Armache, K.-J., Cramer, P.
PDB entry 1y79: Crystal Structure of the E.coli Dipeptidyl Carboxypeptidase Dcp in Complex with a Peptidic Inhibitor
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-12-08
Authors: Comellas-Bigler, M., Lang, R., Bode, W., Maskos, K.
PDB entry 1y7a: Structure of D153H/K328W E. coli alkaline phosphatase in presence of cobalt at 1.77 A resolution
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2004-12-08
Authors: Wang, J., Stieglitz, K., Kantrowitz, E.R.
PDB entry 1y7b: BETA-D-XYLOSIDASE, A FAMILY 43 GLYCOSIDE HYDROLASE
Classification: HYDROLASE
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-08
Authors: Teplyakov, A., Fedorov, E., Gilliland, G.L., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1y7c: T-To-T(High) quaternary transitions in human hemoglobin: betaP100A deoxy low-salt (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-12-08
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y7d: T-To-T(High) quaternary transitions in human hemoglobin: betaP100G deoxy low-salt (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-08
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y7e: The Crystal Structure of Aminopeptidase I from Borrelia burgdorferi B31
Classification: HYDROLASE
Source organism: Borrelia burgdorferi
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2004-12-08
Authors: Min, T., Gorman, J., Shapiro, L., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1y7f: Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-[hydroxy(methyleneamino)oxy]ethyl] Thymidine (T*)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-08
Authors: Egli, M., Minasov, G., Tereshko, V., Pallan, P.S., Teplova, M., Inamati, G.B., Lesnik, E.A., Owens, S.R., Ross, B.S., Prakash, T.P., Manoharan, M.
PDB entry 1y7g: T-To-T(high) quaternary transitions in human hemoglobin: betaN102A deoxy low-salt (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-12-08
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y7h: Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Nicotiana tabacum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2004-12-08
Authors: Forouhar, F., Yang, Y., Kumar, D., Chen, Y., Fridman, E., Park, S.W., Chiang, Y., Acton, T.B., Montelione, G.T., Pichersky, E., Klessig, D.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 1y7i: Structural and biochemical studies identify tobacco SABP2 as a methylsalicylate esterase and further implicate it in plant innate immunity, Northeast Structural Genomics Target AR2241
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Nicotiana tabacum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2004-12-08
Authors: Forouhar, F., Yang, Y., Kumar, D., Chen, Y., Fridman, E., Park, S.W., Chiang, Y., Acton, T.B., Montelione, G.T., Pichersky, E., Klessig, D.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 1y7j: NMR structure family of Human Agouti Signalling Protein (80-132: Q115Y, S124Y)
Classification: SIGNALING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2004-12-08
Authors: McNulty, J.C., Jackson, P.J., Thompson, D.A., Chai, B., Gantz, I., Barsh, G.S., Dawson, P.E., Millhauser, G.L.
PDB entry 1y7k: NMR structure family of Human Agouti Signalling Protein (80-132: Q115Y, S124Y)
Classification: SIGNALING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2004-12-08
Authors: McNulty, J.C., Jackson, P.J., Thompson, D.A., Chai, B., Gantz, I., Barsh, G.S., Dawson, P.E., Millhauser, G.L.
PDB entry 1y7l: O-Acetylserine Sulfhydrylase Complex
Classification: TRANSFERASE
Source organism: Haemophilus influenzae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2004-12-09
Authors: Huang, B., Vetting, M.W., Roderick, S.L.
PDB entry 1y7m: Crystal Structure of the B. subtilis YkuD protein at 2 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2004-12-09
Authors: Bielnicki, J.A., Devedjiev, Y., Derewenda, U., Dauter, Z., Joachimiak, A., Derewenda, Z.S., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y7n: Solution structure of the second PDZ domain of the human neuronal adaptor X11alpha
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-12-09
Authors: Duquesne, A.E., de Ruijter, M., Brouwer, J., Drijfhout, J.W., Nabuurs, S.B., Spronk, C.A.E.M., Vuister, G.W., Ubbink, M., Canters, G.W.
PDB entry 1y7o: The structure of Streptococcus pneumoniae A153P ClpP
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2004-12-09
Authors: Kimber, M.S., Gribun, A., Ching, R., Sprangers, R., Fiebig, K.M., Houry, W.A.
PDB entry 1y7p: 1.9 A Crystal Structure of a Protein of Unknown Function AF1403 from Archaeoglobus fulgidus, Probable Metabolic Regulator
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-09
Authors: Zhang, R., Skarina, T., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y7q: Mammalian SCAN domain dimer is a domain-swapped homologue of the HIV capsid C-terminal domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-12-09
Authors: Ivanov, D., Stone, J.R., Maki, J.L., Collins, T., Wagner, G.
PDB entry 1y7r: 1.7 A Crystal Structure of Protein of Unknown Function SA2161 from Meticillin-Resistant Staphylococcus aureus, Probable Acetyltransferase
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-12-09
Authors: Qiu, Y., Zhang, R., Collart, F., Holzle, D., Joachimiak, A., Kossiakoff, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y7t: Crystal structure of NAD(H)-depenent malate dehydrogenase complexed with NADPH
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2004-12-10
Authors: Tomita, T., Fushinobu, S., Kuzuyama, T., Nishiyama, M.
PDB entry 1y7u: Crystal Structure of Acyl-Coa hydrolase from Bacillus cereus
Classification: HYDROLASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-12-10
Authors: Kim, Y., Li, H., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y7v: X-ray structure of human acid-beta-glucosidase covalently bound to conduritol B epoxide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-10
Authors: Premkumar, L., Sawkar, A.R., Boldin-Adamsky, S., Toker, L., Silman, I., Kelly, J.W., Futerman, A.H., Sussman, J.L., Israel Structural Proteomics Center (ISPC)
PDB entry 1y7w: Crystal structure of a halotolerant carbonic anhydrase from Dunaliella salina
Classification: LYASE
Source organism: Dunaliella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2004-12-10
Authors: Premkumar, L., Greenblatt, H.M., Bageshwar, U.K., Savchenko, T., Gokhman, I., Sussman, J.L., Zamir, A., Israel Structural Proteomics Center (ISPC)
PDB entry 1y7x: Solution structure of a two-repeat fragment of major vault protein
Classification: STRUCTURAL PROTEIN, PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2004-12-10
Authors: Kozlov, G., Vavelyuk, O., Minailiuc, O., Banville, D., Gehring, K., Ekiel, I.
PDB entry 1y7y: High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila
Classification: Transcription regulator
Source organism: Aeromonas hydrophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2004-12-10
Authors: McGeehan, J.E., Streeter, S.D., Papapanagiotou, I., Fox, G.C., Kneale, G.G.
PDB entry 1y7z: T-To-T(High) quaternary transitions in human hemoglobin: betaN108A deoxy low-salt (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2004-12-10
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y80: Structure of a corrinoid (factor IIIm)-binding protein from Moorella thermoacetica
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Moorella thermoacetica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-12-10
Authors: Liu, Z.-J., Fu, Z.-Q., Tempel, W., Das, A., Habel, J., Zhou, W., Chang, J., Chen, L., Lee, D., Nguyen, D., Chang, S.-H., Ljungdahl, L., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1y81: Conserved hypothetical protein Pfu-723267-001 from Pyrococcus furiosus
Classification: structural genomics, unknown function
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2004-12-10
Authors: Zhao, M., Chang, J., Habel, J., Xu, H., Chen, L., Lee, D., Nguyen, D., Chang, S.-H., Horanyi, P., Florence, Q., Tempel, W., Zhou, W., Lin, D., Zhang, H., Praissman, J., Jenney Jr., F.E., Adams, M.W.W., Liu, Z.-J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1y82: Conserved hypothetical protein Pfu-367848-001 from Pyrococcus furiosus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-10
Authors: Horanyi, P., Tempel, W., Habel, J., Chen, L., Lee, D., Nguyen, D., Chang, S.-H., Florence, Q., Zhou, W., Lin, D., Zhang, H., Praissman, J., Jenney Jr., F.E., Adams, M.W.W., Liu, Z.-J., Rose, J.P., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 1y83: T-To-T(High) quaternary transitions in human hemoglobin: betaY145G deoxy low-salt (1 test set)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-10
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y84: Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(imidazolyl)ethyl] Thymidine (T*)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-10
Authors: Egli, M., Minasov, G., Tereshko, V., Pallan, P.S., Teplova, M., Inamati, G.B., Lesnik, E.A., Owens, S.R., Ross, B.S., Prakash, T.P., Manoharan, M.
PDB entry 1y85: T-To-T(High) quaternary transitions in human hemoglobin: desHIS146beta deoxy low-salt
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2004-12-10
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y86: Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(fluoro)ethyl] Thymidine (T*)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2004-12-10
Authors: Egli, M., Minasov, G., Tereshko, V., Pallan, P.S., Teplova, M., Inamati, G.B., Lesnik, E.A., Owens, S.R., Ross, B.S., Prakash, T.P., Manoharan, M.
PDB entry 1y88: Crystal Structure of Protein of Unknown Function AF1548
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2004-12-10
Authors: Lunin, V.V., Evdokimova, E., Kudritskaya, M., Cuff, M.E., Joachimiak, A., Edwards, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y89: Crystal Structure of devB protein
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Vibrio cholerae O1 biovar eltor str. N16961
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-12-10
Authors: Lazarski, K., Cymborowski, M., Chruszcz, M., Zheng, H., Zhang, R., Lezondra, L., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y8a: Structure of gene product AF1437 from Archaeoglobus fulgidus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2004-12-10
Authors: Cuff, M.E., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y8b: Solution NMR-Derived Global Fold of Malate Synthase G from E.coli
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 2004-12-10
Authors: Tugarinov, V., Choy, W.-Y., Orekhov, V.Y., Kay, L.E.
PDB entry 1y8c: Crystal structure of a S-adenosylmethionine-dependent methyltransferase from Clostridium acetobutylicum ATCC 824
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-11
Authors: Rajashankar, K.R., Kniewel, R., Lee, K., Lima, C.D., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1y8d: Dimeric parallel-stranded tetraplex with 3+1 5' G-tetrad interface, single-residue chain reversal loops and GAG triad in the context of A(GGGG) pentad
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2004-12-11
Authors: Phan, A.T., Kuryavyi, V.V., Ma, J.-B., Faure, A., Andreola, M.-L., Patel, D.J.
PDB entry 1y8f: Solution structure of the munc13-1 C1-domain
Classification: ENDOCYTOSIS/EXOCYTOSIS,SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: SOLUTION NMR
Deposited: 2004-12-12
Authors: Shen, N., Guryev, O., Rizo, J.
PDB entry 1y8g: Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Inactive double mutant with selenomethionine
Classification: SIGNALING PROTEIN,TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2004-12-12
Authors: Panneerselvam, S., Marx, A., Mandelkow, E.-M., Mandelkow, E.
PDB entry 1y8h: HORSE METHEMOGLOBIN LOW SALT, PH 7.0
Classification: OXYGEN STORAGE/TRANSPORT
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2004-12-13
Authors: Sankaranarayanan, R., Biswal, B.K., Vijayan, M.
PDB entry 1y8i: Horse methemoglobin low salt, PH 7.0 (98% relative humidity)
Classification: OXYGEN STORAGE/TRANSPORT
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-12-13
Authors: Sankaranarayanan, R., Biswal, B.K., Vijayan, M.
PDB entry 1y8j: Crystal Structure of human NEP complexed with an imidazo[4,5-c]pyridine inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2004-12-13
Authors: Sahli, S., Frank, B., Schweizer, W.B., Diederich, F., Blum-Kaelin, D., Aebi, J.D., Bohm, H.J., Oefner, C., Dale, G.E.
PDB entry 1y8k: Horse methemoglobin low salt, PH 7.0 (88% relative humidity)
Classification: OXYGEN STORAGE/TRANSPORT
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2004-12-13
Authors: Sankaranarayanan, R., Biswal, B.K., Vijayan, M.
PDB entry 1y8l: Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(trifluoro)ethyl] Thymidine (T*)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2004-12-13
Authors: Egli, M., Minasov, G., Tereshko, V., Pallan, P.S., Teplova, M., Inamati, G.B., Lesnik, E.A., Owens, S.R., Ross, B.S., Prakash, T.P., Manoharan, M.
PDB entry 1y8m: Solution Structure of Yeast Mitochondria Fission Protein Fis1
Classification: UNKNOWN FUNCTION
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR
Deposited: 2004-12-13
Authors: Suzuki, M., Youle, R.J., Tjandra, N.
PDB entry 1y8n: Crystal structure of the PDK3-L2 complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2004-12-13
Authors: Kato, M., Chuang, J.L., Wynn, R.M., Chuang, D.T.
PDB entry 1y8o: Crystal structure of the PDK3-L2 complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2004-12-13
Authors: Kato, M., Chuang, J.L., Wynn, R.M., Chuang, D.T.
PDB entry 1y8p: Crystal structure of the PDK3-L2 complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2004-12-13
Authors: Kato, M., Chuang, J.L., Wynn, R.M., Chuang, D.T.
PDB entry 1y8q: SUMO E1 ACTIVATING ENZYME SAE1-SAE2-MG-ATP COMPLEX
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2004-12-13
Authors: Lois, L.M., Lima, C.D.
PDB entry 1y8r: SUMO E1 ACTIVATING ENZYME SAE1-SAE2-SUMO1-MG-ATP COMPLEX
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2004-12-13
Authors: Lois, L.M., Lima, C.D.
PDB entry 1y8t: Crystal Structure of RV0983 from Mycobacterium tuberculosis- Proteolytically active form
Classification: UNKNOWN FUNCTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2004-12-13
Authors: Palaninathan, S.K., MohamedMohaideen, N.N., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 1y8v: Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propyl Thymidine (T*)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2004-12-13
Authors: Egli, M., Minasov, G., Tereshko, V., Pallan, P.S., Teplova, M., Inamati, G.B., Lesnik, E.A., Owens, S.R., Ross, B.S., Prakash, T.P., Manoharan, M.
PDB entry 1y8w: T-To-T(High) quaternary transitions in human hemoglobin: alphaR92A oxy (2mM IHP, 20% PEG) (10 test sets)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2004-12-13
Authors: Kavanaugh, J.S., Rogers, P.H., Arnone, A.
PDB entry 1y8x: Structural basis for recruitment of Ubc12 by an E2-binding domain in NEDD8's E1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-13
Authors: Huang, D.T., Paydar, A., Zhuang, M., Waddell, M.B., Holton, J.M., Schulman, B.A.
PDB entry 1y8y: Crystal structure of human CDK2 complexed with a pyrazolo[1,5-a]pyrimidine inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.996 Å
Deposited: 2004-12-14
Authors: Williamson, D.S., Parratt, M.J., Torrance, C.J., Bower, J.F., Moore, J.D., Richardson, C.M., Dokurno, P., Cansfield, A.D., Francis, G.L., Hebdon, R.J., Howes, R., Jackson, P.S., Lockie, A.M., Murray, J.B., Nunns, C.L., Powles, J., Robertson, A., Surgenor, A.E.
PDB entry 1y8z: alpha-glucosyltransferase in complex with UDP and a 13-mer DNA containing a HMU base at 1.9 A resolution
Classification: Transferase/DNA
Source organism: Enterobacteria phage T4; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-14
Authors: Lariviere, L., Sommer, N., Morera, S.
PDB entry 1y90: HIV-1 Dis(Mal) Duplex Mn-Soaked
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2004-12-14
Authors: Ennifar, E., Walter, P., Dumas, P.
PDB entry 1y91: Crystal structure of human CDK2 complexed with a pyrazolo[1,5-a]pyrimidine inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2004-12-14
Authors: Williamson, D.S., Parratt, M.J., Torrance, C.J., Bower, J.F., Moore, J.D., Richardson, C.M., Dokurno, P., Cansfield, A.D., Francis, G.L., Hebdon, R.J., Howes, R., Jackson, P.S., Lockie, A.M., Murray, J.B., Nunns, C.L., Powles, J., Robertson, A., Surgenor, A.E.
PDB entry 1y92: Crystal structure of the P19A/N67D Variant Of Bovine seminal Ribonuclease
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-12-14
Authors: Picone, D., Di Fiore, A., Ercole, C., Franzese, M., Sica, F., Tomaselli, S., Mazzarella, L.
PDB entry 1y93: Crystal structure of the catalytic domain of human MMP12 complexed with acetohydroxamic acid at atomic resolution
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2004-12-14
Authors: Bertini, I., Calderone, V., Cosenza, M., Fragai, M., Lee, Y.-M., Luchinat, C., Mangani, S., Terni, B., Turano, P.
PDB entry 1y94: Crystal structure of the G16S/N17T/P19A/S20A/N67D Variant Of Bovine seminal Ribonuclease
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-12-14
Authors: Picone, D., Di Fiore, A., Ercole, C., Franzese, M., Sica, F., Tomaselli, S., Mazzarella, L.
PDB entry 1y95: HIV-1 Dis(Mal) Duplex Pb-Soaked
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-12-14
Authors: Ennifar, E., Walter, P., Dumas, P.
PDB entry 1y96: crystal structure of the Gemin6/Gemin7 heterodimer from the human SMN complex
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2004-12-14
Authors: Ma, Y., Dostie, J., Dreyfuss, G., Van Duyne, G.D.
PDB entry 1y97: The human TREX2 3' exonuclease structure suggests a mechanism for efficient non-processive DNA catalysis
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-14
Authors: Perrino, F.W., Harvey, S., McMillin, S., Hollis, T.
PDB entry 1y98: Structure of the BRCT repeats of BRCA1 bound to a CtIP phosphopeptide.
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2004-12-14
Authors: Varma, A.K., Brown, R.S., Birrane, G., Ladias, J.A.A.
PDB entry 1y99: HIV-1 subtype A DIS RNA duplex
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2004-12-15
Authors: Ennifar, E., Yusupov, M., Walter, P., Marquet, R., Ehresmann, B., Ehresmann, C., Dumas, P.
PDB entry 1y9a: Alcohol Dehydrogenase from Entamoeba histolotica in complex with cacodylate
Classification: OXIDOREDUCTASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2004-12-15
Authors: Shimon, L.J., Peretz, M., Goihberg, E., Burstein, Y., Frolow, F.
PDB entry 1y9b: Structure of Conserved Putative Transcriptional Factor from Vibrio cholerae O1 biovar eltor str. N16961
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Vibrio cholerae O1 biovar eltor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-12-15
Authors: Binkowski, T.A., Hatzos, C., Quartey, P., Moy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y9d: Pyruvate Oxidase variant V265A from Lactobacillus plantarum
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus plantarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2004-12-15
Authors: Wille, G., Ritter, M., Weiss, M.S., Konig, S., Mantele, W., Hubner, G.
PDB entry 1y9e: Crystal structure of Bacillus subtilis protein yhfP with NAD bound
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2004-12-15
Authors: Min, T., Gorman, J., Shapiro, L., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1y9f: Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-allyl Thymidine (T*)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2004-12-15
Authors: Egli, M., Minasov, G., Tereshko, V., Pallan, P.S., Teplova, M., Inamati, G.B., Lesnik, E.A., Owens, S.R., Ross, B.S., Prakash, T.P., Manoharan, M.
PDB entry 1y9g: Crystal structure of exo-inulinase from Aspergillus awamori complexed with fructose
Classification: HYDROLASE
Source organism: Aspergillus awamori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2004-12-15
Authors: Nagem, R.A.P., Rojas, A.L., Golubev, A.M., Korneeva, O.S., Eneyskaya, E.V., Kulminskaya, A.A., Neustroev, K.N., Polikarpov, I.
PDB entry 1y9h: Methylation of cytosine at C5 in a CpG sequence context causes a conformational switch of a benzo[a]pyrene diol epoxide-N2-guanine adduct in DNA from a minor groove alignment to intercalation with base displacement
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2004-12-15
Authors: Zhang, N., Lin, C., Huang, X., Kolbanovskiy, A., Hingerty, B.E., Amin, S., Broyde, S., Geacintov, N.E., Patel, D.J.
PDB entry 1y9i: Crystal structure of low temperature requirement C protein from Listeria monocytogenes
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2004-12-15
Authors: Kumaran, D., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1y9j: Solution structure of the rat Sly1 N-terminal domain
Classification: PROTEIN TRANSPORT
Source organism: Rattus norvegicus
Experimental method: SOLUTION NMR
Deposited: 2004-12-15
Authors: Arac, D., Dulubova, I., Pei, J., Huryeva, I., Grishin, N.V., Rizo, J.
PDB entry 1y9k: IAA acetyltransferase from Bacillus cereus ATCC 14579
Classification: TRANSFERASE
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2004-12-15
Authors: Nocek, B.P., Osipiuk, J., Li, H., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 1y9l: The X-ray structure of an secretion system protein
Classification: LIPID BINDING PROTEIN
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2004-12-15
Authors: Lario, P.I., Pfuetzer, R.A., Frey, E.A., Creagh, L., Haynes, C., Maurelli, A.T., Strynadka, N.C.
PDB entry 1y9m: Crystal structure of exo-inulinase from Aspergillus awamori in spacegroup P212121
Classification: HYDROLASE
Source organism: Aspergillus awamori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2004-12-16
Authors: Nagem, R.A.P., Rojas, A.L., Golubev, A.M., Korneeva, O.S., Eneyskaya, E.V., Kulminskaya, A.A., Neustroev, K.N., Polikarpov, I.
PDB entry 1y9o: 1H NMR Structure of Acylphosphatase from the hyperthermophile Sulfolobus Solfataricus
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: SOLUTION NMR
Deposited: 2004-12-16
Authors: Corazza, A., Rosano, C., Pagano, K., Alverdi, V., Esposito, G., Capanni, C., Bemporad, F., Plakoutsi, G., Stefani, M., Chiti, F., Zuccotti, S., Bolognesi, M., Viglino, P.
PDB entry 1y9q: Crystal Structure of HTH_3 family Transcriptional Regulator from Vibrio cholerae
Classification: TRANSCRIPTION REGULATOR
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2004-12-16
Authors: Kumaran, D., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 1y9r: Crystal structure of the human mineralocorticoid receptor ligand-binding domain bound to deoxycorticosterone and harboring the S810L mutation responsible for a severe form of hypertension
Classification: TRANSCRIPTION, LIGAND BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2004-12-16
Authors: Fagart, J., Huyet, J., Pinon, G.M., Rochel, M., Mayer, C., Rafestin-Oblin, M.E.
PDB entry 1y9s: Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-propargyl Thymidine (T*)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2004-12-16
Authors: Egli, M., Minasov, G., Tereshko, V., Pallan, P.S., Teplova, M., Inamati, G.B., Lesnik, E.A., Owens, S.R., Ross, B.S., Prakash, T.P., Manoharan, M.