LiteFold/PDB huggingface dataset:
PDB entry 7n55: The crystal structure of the mutant I38T PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988514
Classification: VIRAL PROTEIN, Hydrolase/Inhibitor
Source organism: Influenza A virus (strain swl A/California/04/2009 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2021-06-04
Authors: Cuypers, M.G., Slavish, J.P., Rankovic, Z., White, S.W.
PDB entry 7n56: Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E
Classification: HYDROLASE
Source organism: Rickettsia prowazekii (strain Madrid E)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-06-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7n57: Crystal structure of R20A human Galectin-7 mutant in presence of lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2021-06-04
Authors: Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7n58: Structure of AtAtm3 in the inward-facing conformation
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-06-05
Authors: Fan, C., Rees, D.C.
PDB entry 7n59: Structure of AtAtm3 in the inward-facing conformation with GSSG bound
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-06-05
Authors: Fan, C., Rees, D.C.
PDB entry 7n5a: Structure of AtAtm3 in the closed conformation
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2021-06-05
Authors: Fan, C., Rees, D.C.
PDB entry 7n5b: Structure of AtAtm3 in the outward-facing conformation
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-06-05
Authors: Fan, C., Rees, D.C.
PDB entry 7n5c: 6218 TCR in complex with H2Db PA with an engineered TCR-pMHC disulfide bond
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2021-06-05
Authors: Szeto, C., Gras, S.
PDB entry 7n5d: Composite Structure of Mechanosensitive Ion Channel Flycatcher1 in GDN
Classification: MEMBRANE PROTEIN
Source organism: Dionaea muscipula
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-06-05
Authors: Jojoa-Cruz, S., Saotome, K., Lee, W.H., Patapoutian, A., Ward, A.B.
PDB entry 7n5e: Structure of Mechanosensitive Ion Channel Flycatcher1 in GDN
Classification: MEMBRANE PROTEIN
Source organism: Dionaea muscipula
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-06-05
Authors: Jojoa-Cruz, S., Saotome, K., Lee, W.H., Patapoutian, A., Ward, A.B.
PDB entry 7n5f: Structure of Mechanosensitive Ion Channel Flycatcher1 Protomer in 'Down' conformation in GDN
Classification: MEMBRANE PROTEIN
Source organism: Dionaea muscipula
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-06-05
Authors: Jojoa-Cruz, S., Saotome, K., Lee, W.H., Patapoutian, A., Ward, A.B.
PDB entry 7n5g: Structure of Mechanosensitive Ion Channel Flycatcher1 Protomer in 'Up' conformation in GDN
Classification: MEMBRANE PROTEIN
Source organism: Dionaea muscipula
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2021-06-05
Authors: Jojoa-Cruz, S., Saotome, K., Lee, W.H., Patapoutian, A., Ward, A.B.
PDB entry 7n5h: Cryo-EM structure of broadly neutralizing antibody 2-36 in complex with prefusion SARS-CoV-2 spike glycoprotein
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2021-06-05
Authors: Casner, R.G., Cerutti, G., Shapiro, L.
PDB entry 7n5i: PCNA from Thermococcus gammatolerans: crystal I, collection 1, 1.95 A, 5.22 MGy
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-06-05
Authors: Marin-Tovar, Y., Rudino-Pinera, E.
PDB entry 7n5j: PCNA from Thermococcus gammatolerans: crystal I, collection 5, 2.82 A, 89.1 MGy
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2021-06-05
Authors: Marin-Tovar, Y., Rudino-Pinera, E.
PDB entry 7n5k: PCNA from Thermococcus gammatolerans: crystal II, collection 1, 1.98 A, 3.84 MGy
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-06-05
Authors: Marin-Tovar, Y., Rudino-Pinera, E.
PDB entry 7n5l: PCNA from Thermococcus gammatolerans: crystal II, collection 20, 3.07 A, 77.0 MGy
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2021-06-05
Authors: Marin-Tovar, Y., Rudino-Pinera, E.
PDB entry 7n5m: PCNA from Thermococcus gammatolerans: crystal III, collection 1, 2.00 A, 1.91 MGy
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-05
Authors: Marin-Tovar, Y., Rudino-Pinera, E.
PDB entry 7n5n: PCNA from Thermococcus gammatolerans: crystal III, collection 15, 2.20 A, 28.7 MGy
Classification: DNA BINDING PROTEIN
Source organism: Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-06-05
Authors: Marin-Tovar, Y., Rudino-Pinera, E.
PDB entry 7n5o: Fragment-Based Discovery of a Novel Bruton's Tyrosine Kinase Inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2021-06-06
Authors: Dougan, D.R., Lawson, J.D.
PDB entry 7n5p: 6218 TCR in complex with H2-Db PA224-233 with a cysteine mutant
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2021-06-06
Authors: Szeto, C., Gras, S.
PDB entry 7n5q: Peptide-MHC complex of mouse H2-Db presenting PA224 with E4C mutation
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2021-06-06
Authors: Szeto, C., Gras, S.
PDB entry 7n5r: Fragment-Based Discovery of a Novel Bruton's Tyrosine Kinase Inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-06-06
Authors: Dougan, D.R., Lawson, J.D.
PDB entry 7n5s: ZBTB7A Zinc Finger Domain Bound to -200 Site of Fetal Globin Promoter (Oligo 6)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2021-06-06
Authors: Horton, J.R., Ren, R., Cheng, X.
PDB entry 7n5t: ZBTB7A Zinc Finger Domain Bound to -200 Site of Fetal Globin Promoter (Oligo 5)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-06-06
Authors: Horton, J.R., Ren, R., Cheng, X.
PDB entry 7n5u: ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 21)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2021-06-06
Authors: Horton, J.R., Ren, R., Cheng, X.
PDB entry 7n5v: ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 20)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2021-06-06
Authors: Horton, J.R., Ren, R., Cheng, X.
PDB entry 7n5w: ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 23)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2021-06-06
Authors: Horton, J.R., Ren, R., Cheng, X.
PDB entry 7n5x: Fragment-Based Discovery of a Novel Bruton's Tyrosine Kinase Inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-06-07
Authors: Dougan, D.R., Lawson, J.D.
PDB entry 7n5y: Fragment-Based Drug Design of a Novel, Covalent Bruton's Tyrosine Kinase Inhibitor
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-06-07
Authors: Dougan, D.R., Lawson, J.D.
PDB entry 7n5z: SARS-CoV-2 Main protease C145S mutant
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2021-06-07
Authors: Noske, G.D., Nakamura, A.M., Gawriljuk, V.O., Lima, G.M.A., Zeri, A.C.M., Nascimento, A.F.Z., Oliva, G., Godoy, A.S.
PDB entry 7n60: The crystal structure of 4-methoxybenzoate-bound CYP199A S244D mutant
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris (strain HaA2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2021-06-07
Authors: Lau, I.C.K., Coleman, T., Bell, S.G., Bruning, J.B.
PDB entry 7n61: structure of C2 projections and MIPs
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-06-07
Authors: Han, L., Zhang, K.
PDB entry 7n62: SARS-CoV-2 Spike (2P) in complex with C12C9 Fab (NTD local reconstruction)
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2021-06-07
Authors: Windsor, I.W., Jenni, S., Bajic, G., Tong, P., Gautam, A.K., Wesemann, D.R., Harrison, S.C.
PDB entry 7n63: X-ray structure of HCAN_0200, an aminotransferase from Helicobacter canadensis in complex with its external aldimine
Classification: TRANSFERASE
Source organism: Helicobacter canadensis MIT 98-5491
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-06-07
Authors: Griffiths, W.A., Heisdorf, C.J., Thoden, J.B., Holden, H.M.
PDB entry 7n64: SARS-CoV-2 Spike (2P) in complex with G32R7 Fab (RBD and NTD local reconstruction)
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2021-06-07
Authors: Windsor, I.W., Jenni, S., Tong, P., Gautam, A.K., Wesemann, D.R., Harrison, S.C.
PDB entry 7n65: Complex structure of HIV superinfection Fab QA013.2 and BG505.SOSIP.664
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.15 Å
Deposited: 2021-06-07
Authors: Mangala Prasad, V., Shipley, M.M., Overbaugh, J.M., Lee, K.K.
PDB entry 7n66: BACE-1 in complex with ligand 12
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-06-07
Authors: Shaffer, P.L.
PDB entry 7n67: Crystal structure of HCAN_0198, a 3,4-ketoisomerase from Helicobacter canadensis
Classification: ISOMERASE
Source organism: Helicobacter canadensis MIT 98-5491
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-06-07
Authors: Heisdorf, C.J., Griffiths, W.A., Thoden, J.B., Holden, H.M.
PDB entry 7n68: The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988288
Classification: VIRAL PROTEIN/Inhibitor
Source organism: Influenza A virus (strain swl A/California/04/2009 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2021-06-07
Authors: Cuypers, M.G., Slavish, J.P., Rankovic, Z., White, S.W.
PDB entry 7n69: Pre-fusion state 2 of EEEV with localized reconstruction
Classification: VIRUS
Source organism: Eastern equine encephalitis virus (strain Florida 91-469)
Experimental method: ELECTRON MICROSCOPY
Resolution: 14.1 Å
Deposited: 2021-06-07
Authors: Chen, C.-L., Kuhn, R.J., Klose, T.
PDB entry 7n6a: Pre-fusion state 1 of EEEV with localized reconstruction
Classification: VIRUS
Source organism: Eastern equine encephalitis virus (strain Florida 91-469)
Experimental method: ELECTRON MICROSCOPY
Resolution: 14.3 Å
Deposited: 2021-06-07
Authors: Chen, C.-L., Kuhn, R.J., Klose, T.
PDB entry 7n6b: Structure of MmpL3 reconstituted into lipid nanodisc in the TMM bound state
Classification: TRANSLOCASE
Source organism: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2021-06-08
Authors: Su, C.C., Yu, E.
PDB entry 7n6c: Crystal structure of R22A human Galectin-7 mutant
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-06-08
Authors: Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7n6d: HLA peptide complex
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-06-08
Authors: Chaurasia, P., Petersen, J., Rossjohn, J.
PDB entry 7n6e: TCR peptide HLA-A2 complex
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-06-08
Authors: Chaurasia, P., Rossjohn, J., Petersen, J.
PDB entry 7n6f: Co-complex CYP46A1 with compound 3f
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-06-08
Authors: Lane, W., Gay, S.C.
PDB entry 7n6g: C1 of central pair
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-06-08
Authors: Han, L., Zhang, K.
PDB entry 7n6h: The crystal structure of the GH30 subfamily 10 enzyme, AcXbh30A from Acetivibrio clariflavus
Classification: HYDROLASE
Source organism: Acetivibrio clariflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2021-06-08
Authors: Tan, K., St John, F.J.
PDB entry 7n6i: ATP-bound TnsC-TniQ complex from ShCAST system
Classification: DNA BINDING PROTEIN/DNA
Source organism: Scytonema hofmannii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-06-08
Authors: Park, J., Tsai, A.W.L., Mehrotra, E., Kellogg, E.H.
PDB entry 7n6j: Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RKQSTIALALLPLLFTPRR
Classification: CHAPERONE/HYDROLASE
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-08
Authors: Jansen, R.M., Ozden, C., Gierasch, L.M., Garman, S.C.
PDB entry 7n6k: Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RALALLPLSR
Classification: CHAPERONE/HYDROLASE
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-06-08
Authors: Jansen, R.M., Ozden, C., Gierasch, L.M., Garman, S.C.
PDB entry 7n6l: Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide EANQQKPLLGLFADG
Classification: CHAPERONE/HYDROLASE
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-06-08
Authors: Jansen, R.M., Ozden, C., Gierasch, L.M., Garman, S.C.
PDB entry 7n6m: Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RQKPLLGLSR
Classification: CHAPERONE/HYDROLASE
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2021-06-08
Authors: Jansen, R.M., Ozden, C., Gierasch, L.M., Garman, S.C.
PDB entry 7n6n: SARS-CoV-2 Main protease C145S mutant in complex with N and C-terminal residues
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-06-08
Authors: Noske, G.D., Nakamura, A.M., Gawriljuk, V.O., Lima, G.M.A., Zeri, A.C.M., Nascimento, A.F.Z., Fernandes, R.S., Oliva, G., Godoy, A.S.
PDB entry 7n6o: The crystal structure of the GH30 subfamily 10 enzyme, AcXbh30A from Acetivibrio clariflavus in complex with xylobiose
Classification: HYDROLASE
Source organism: Acetivibrio clariflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2021-06-08
Authors: Tan, K., St John, J.F.
PDB entry 7n6p: Crystal structure of the anti-EBOV and SUDV monoclonal antibody 1C3 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2021-06-08
Authors: Milligan, J.C., Yu, X., Buck, T., Saphire, E.O.
PDB entry 7n6q: Structure of PPPA bound human ACAT2
Classification: Transferase/Inhibitor
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.87 Å
Deposited: 2021-06-08
Authors: Li, X., Long, T.
PDB entry 7n6r: Structure of nevanimibe bound human ACAT2
Classification: TRANSFERASE/Inhibitor
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2021-06-08
Authors: Li, X., Long, T.
PDB entry 7n6s: Crystal Structure of deoxyuridine 5'-triphosphate nucleotidohydrolase from Rickettsia prowazekii str. Madrid E in complex with 2'-deoxyuridine 5'-monophoephate (dUMP)
Classification: HYDROLASE
Source organism: Rickettsia prowazekii (strain Madrid E)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2021-06-09
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7n6t: Crystal structure of inhibitor-free HIV-1 PRS17 revertant mutant PRS17 V48G
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2021-06-09
Authors: Burnaman, S.H., Wang, Y.-F., Weber, I.T.
PDB entry 7n6u: Structure of uncleaved HIV-1 JR-FL Env glycoprotein trimer in state U1 bound to small Molecule HIV-1 Entry Inhibitor BMS-378806
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-06-09
Authors: Zhang, S., Wang, K., Mao, Y.
PDB entry 7n6v: Crystal structure of HIV-1 Protease multiple mutants PRS17 with Revertant mutation V48G bound to inhibitor Amprenavir
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2021-06-09
Authors: Burnaman, S.H., Wang, Y.-F., Weber, I.T.
PDB entry 7n6w: Structure of uncleaved HIV-1 JR-FL Env glycoprotein trimer in state U2 bound to small Molecule HIV-1 Entry Inhibitor BMS-378806
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2021-06-09
Authors: Zhang, S., Wang, K., Mao, Y.
PDB entry 7n6x: Crystal structure of HIV-1 Protease multiple mutants PRS17 bound to inhibitor Amprenavir
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2021-06-09
Authors: Burnaman, S.H., Wang, Y.-F., Weber, I.T.
PDB entry 7n6y: Mouse norovirus (MNV-1) capsid at pH 5.0
Classification: VIRUS
Source organism: Murine norovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-06-09
Authors: Smith, T.J.
PDB entry 7n6z: Crystal Structure of PI5P4KIIAlpha
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-06-09
Authors: Chen, S., Ha, Y.
PDB entry 7n70: Cryo-EM structure of ATP13A2 in the BeF-bound E2P-like state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-06-09
Authors: Sim, S.I., Park, E.
PDB entry 7n71: Crystal Structure of PI5P4KIIAlpha
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-06-09
Authors: Chen, S., Ha, Y.
PDB entry 7n72: Cryo-EM structure of ATP13A2 in the AlF-bound E2-Pi-like state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2021-06-09
Authors: Sim, S.I., Park, E.
PDB entry 7n73: Cryo-EM structure of ATP13A2 in the ADP-AlF-bound E1P-ADP-like state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-06-09
Authors: Sim, S.I., Park, E.
PDB entry 7n74: Cryo-EM structure of ATP13A2 D508N mutant in the E1-ATP-like state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2021-06-09
Authors: Sim, S.I., Park, E.
PDB entry 7n75: Cryo-EM structure of ATP13A2 D458N/D962N mutant in the E1-apo state, Conformation 1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-06-09
Authors: Sim, S.I., Park, E.
PDB entry 7n76: Cryo-EM structure of ATP13A2 D458N/D962N mutant in the E1-apo state, Conformation 2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-06-09
Authors: Sim, S.I., Park, E.
PDB entry 7n77: Cryo-EM structure of ATP13A2 D458N/D962N mutant in the AlF-bound E1P-like state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-06-09
Authors: Sim, S.I., Park, E.
PDB entry 7n78: Cryo-EM structure of ATP13A2 in the E2-Pi state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-06-09
Authors: Sim, S.I., Park, E.
PDB entry 7n79: O2-, PLP-dependent desaturase Plu4 holo-enzyme
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudoalteromonas luteoviolacea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-06-09
Authors: Hoffarth, E.R., Ryan, K.S.
PDB entry 7n7a: crystal structure of the dTDP-Qui3N N-formyltransferase from Helicobacter canadensis, apo form
Classification: TRANSFERASE
Source organism: Helicobacter canadensis MIT 98-5491
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-06-10
Authors: Heisdorf, C.J., Thoden, J.B., Holden, H.M.
PDB entry 7n7b: crystal structure of the N-formyltrasferase HCAN_0200 from Helicobacter canadensis on complex with folinic acid and dTDP-3-aminofucose
Classification: TRANSFERASE
Source organism: Helicobacter canadensis MIT 98-5491
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-10
Authors: Heisdorf, C.J., Thoden, J.B., Holden, H.M.
PDB entry 7n7c: crystal structure of the N-formyltransferase HCAN_0200 from helicobacter canadensis in complex with folinic acid and dTDP-3-aminoquinovose
Classification: TRANSFERASE
Source organism: Helicobacter canadensis MIT 98-5491
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-10
Authors: Heisdorf, C.J., Thoden, J.B., Holden, H.M.
PDB entry 7n7d: Solution structure of the MYC promoter G-quadruplex in complex with berberine: conformer A
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2021-06-10
Authors: Dickerhoff, J., Yang, D.
PDB entry 7n7e: Solution structure of the MYC promoter G-quadruplex in complex with berberine: conformer B
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2021-06-10
Authors: Dickerhoff, J., Yang, D.
PDB entry 7n7f: Mouse norovirus (MNV-1) capsid at pH 7.5
Classification: VIRUS
Source organism: Murine norovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-06-10
Authors: Smith, T.J.
PDB entry 7n7g: Crystal Structure of FosB from Enterococcus faecium with Fosfomycin
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Enterococcus faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-10
Authors: Shay, M.R., Simmons, Z., Thompson, M.K.
PDB entry 7n7h: X-ray crystal structure of Viperin-like enzyme from Nematostella vectensis
Classification: ANTIVIRAL PROTEIN
Source organism: Nematostella vectensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2021-06-10
Authors: Grove, T.L., Almo, S.C., Bonanno, J.B., Lachowicz, J.C., Gizzi, A.G.
PDB entry 7n7i: X-ray crystal structure of Viperin-like enzyme from Trichoderma virens
Classification: ANTIVIRAL PROTEIN
Source organism: Hypocrea virens (strain Gv29-8 / FGSC 10586)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2021-06-10
Authors: Grove, T.L., Almo, S.C., Bonanno, J.B., Lachowicz, J.C., Gizzi, A.G.
PDB entry 7n7j: Crystal Structure of PI5P4KIIAlpha complex with AMPPNP
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-06-10
Authors: Chen, S., Ha, Y.
PDB entry 7n7k: Crystal Structure of PI5P4KIIAlpha complex with AMPPNP
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-10
Authors: Chen, S., Ha, Y.
PDB entry 7n7l: Crystal Structure of PI5P4KIIAlpha complex with BI-D1870
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-06-10
Authors: Chen, S., Ha, Y.
PDB entry 7n7m: Crystal Structure of PI5P4KIIAlpha complex with BI-2536
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-06-10
Authors: Chen, S., Ha, Y.
PDB entry 7n7n: Crystal Structure of PI5P4KIIAlpha complex with Volasertib
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-06-10
Authors: Chen, S., Ha, Y.
PDB entry 7n7o: Crystal Structure of PI5P4KIIAlpha complex with Palbociclib
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-06-10
Authors: Chen, S., Ha, Y.
PDB entry 7n7p: Cryo-EM structure of human TMEM120A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2021-06-10
Authors: Xue, J., Han, Y., Jiang, Y.
PDB entry 7n7r: Crystal Structure of SARS-CoV-2 NendoU in complex with Z2472938267
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2021-06-11
Authors: Godoy, A.S., Douangamath, A., Nakamura, A.M., Dias, A., Krojer, T., Noske, G.D., Gawiljuk, V.O., Fernandes, R.S., Fairhead, M., Powell, A., Dunnet, L., Aimon, A., Fearon, D., Brandao-Neto, J., Skyner, R., von Delft, F., Oliva, G.
PDB entry 7n7s: Crystal Structure of Hydroxymethylglutaryl-CoA reductase from Elizabethkingia anophelis NUHP1
Classification: OXIDOREDUCTASE
Source organism: Elizabethkingia anophelis NUHP1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-06-11
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7n7u: Crystal Structure of SARS-CoV-2 NendoU in complex with LIZA-7
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2021-06-11
Authors: Godoy, A.S., Douangamath, A., Nakamura, A.M., Dias, A., Krojer, T., Noske, G.D., Gawiljuk, V.O., Fernandes, R.S., Fairhead, M., Powell, A., Dunnet, L., Aimon, A., Fearon, D., Brandao-Neto, J., Skyner, R., von Delft, F., Oliva, G.
PDB entry 7n7v: Crystal structure of TtnM, a Fe(II)-alpha-ketoglutarate-dependent hydroxylase from the tautomycetin biosynthesis pathway in Streptomyces griseochromogenes at 2 A.
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseochromogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-06-11
Authors: Han, L., Xu, W., Ma, M., Miller, M.D., Shen, B., Phillips Jr., G.N., Enzyme Discovery for Natural Product Biosynthesis (NatPro)
PDB entry 7n7w: Crystal Structure of SARS-CoV-2 NendoU in complex with CSC000178569
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2021-06-11
Authors: Godoy, A.S., Douangamath, A., Nakamura, A.M., Dias, A., Krojer, T., Noske, G.D., Gawiljuk, V.O., Fernandes, R.S., Fairhead, M., Powell, A., Dunnet, L., Aimon, A., Fearon, D., Brandao-Neto, J., Skyner, R., von Delft, F., Oliva, G.
PDB entry 7n7x: Crystal structure of BCX7353(ORLADEYO) in complex with human plasma kallikrein serine protease domain at 2.1 angstrom resolution
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.097 Å
Deposited: 2021-06-11
Authors: Krishnan, R., Yarlagadda, B.S., Kotian, P., Polach, K.J., Zhang, W.
PDB entry 7n7y: Crystal Structure of SARS-CoV-2 NendoU in complex with Z18197050
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2021-06-11
Authors: Godoy, A.S., Douangamath, A., Nakamura, A.M., Dias, A., Krojer, T., Noske, G.D., Gawiljuk, V.O., Fernandes, R.S., Fairhead, M., Powell, A., Dunnet, L., Aimon, A., Fearon, D., Brandao-Neto, J., Skyner, R., von Delft, F., Oliva, G.
PDB entry 7n7z: Structure of Acetyl-CoA acetyltransferase from Syntrophomonas wolfei
Classification: TRANSFERASE
Source organism: Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2021-06-11
Authors: Arbing, M.A., Gunsalus, R.P.
PDB entry 7n80: Crystal Structure of PI5P4KIIBeta
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-06-11
Authors: Chen, S., Ha, Y.
PDB entry 7n81: Crystal Structure of PI5P4KIIBeta complex with CC260
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-06-11
Authors: Chen, S., Ha, Y.
PDB entry 7n82: NMR Solution structure of Se0862
Classification: UNKNOWN FUNCTION
Source organism: Synechococcus elongatus
Experimental method: SOLUTION NMR
Deposited: 2021-06-11
Authors: Zhang, N., LiWang, A.L.
PDB entry 7n83: Crystal Structure of SARS-CoV-2 NendoU in complex with Z2443429438
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2021-06-12
Authors: Godoy, A.S., Douangamath, A., Nakamura, A.M., Dias, A., Krojer, T., Noske, G.D., Gawiljuk, V.O., Fernandes, R.S., Fairhead, M., Powell, A., Dunnet, L., Aimon, A., Fearon, D., Brandao-Neto, J., Skyner, R., von Delft, F., Oliva, G.
PDB entry 7n84: Double nuclear outer ring from the isolated yeast NPC
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.6 Å
Deposited: 2021-06-13
Authors: Akey, C.W., Rout, M.P., Ouch, C., Echeverria, I., Fernandez-Martinez, J., Nudelman, I.
PDB entry 7n85: Inner ring spoke from the isolated yeast NPC
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.6 Å
Deposited: 2021-06-13
Authors: Akey, C.W., Rout, M.P., Ouch, C., Echeverria, I., Fernandez-Martinez, J., Nudelman, I.
PDB entry 7n86: Crystal Structure of Human Protocadherin-24 EC1-2 Form II
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.175 Å
Deposited: 2021-06-13
Authors: Modak, D., Gray, M.E., Sotomayor, M.
PDB entry 7n87: Solution NMR structure of peptidase domain from Clostridium thermocellum PCAT1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372)
Experimental method: SOLUTION NMR
Deposited: 2021-06-13
Authors: Bhattacharya, S., Palillo, A.
PDB entry 7n88: The cryoEM structure of LbpB from N. gonorrhoeae in complex with lactoferrin
Classification: MEMBRANE PROTEIN/TRANSPORT PROTEIN
Source organism: Homo sapiens; Neisseria gonorrhoeae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-06-14
Authors: Yadav, R., Noinaj, N.
PDB entry 7n89: Room-temperature X-ray structure of SARS-CoV-2 main protease C145A mutant in complex with substrate Ac-SAVLQSGF-CONH2
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-14
Authors: Kovalevsky, A., Kneller, D.W., Coates, L.
PDB entry 7n8b: Cycloheximide bound vacant 80S structure isolated from cbf5-D95A
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2021-06-14
Authors: Rai, J., Zhao, Y., Li, H.
PDB entry 7n8c: Joint X-ray/neutron structure of SARS-CoV-2 main protease (Mpro) in complex with Mcule5948770040
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2021-06-14
Authors: Kovalevsky, A., Kneller, D.W., Coates, L.
PDB entry 7n8d: Crystal structure of R22A human Galectin-7 mutant in presence of Lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2021-06-14
Authors: Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7n8e: PptT PAP(CoA) 9056 complex
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-06-14
Authors: Mosior, J.W., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 7n8f: The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988288
Classification: VIRAL PROTEIN/Inhibitor
Source organism: Influenza A virus (strain swl A/California/04/2009 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-06-14
Authors: Cuypers, M.G., Slavish, J.P., Rankovic, Z., White, S.W.
PDB entry 7n8g: Crystal structure of R20A-R22A human Galectin-7 mutant
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-06-14
Authors: Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7n8h: SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2021-06-14
Authors: McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7n8i: SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 (Local Refinement of the NTD/S2L20)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-06-14
Authors: McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 7n8j: Human importin alpha 1 in complex with Bimax2 peptide
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-06-15
Authors: Donnelly, C.M., Cross, E.M., Tsimbalyuk, S., Forwood, J.K.
PDB entry 7n8k: LINE-1 endonuclease domain complex with Mg
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2021-06-15
Authors: Korolev, S., Miller, I.
PDB entry 7n8l: PptT PAP(CoA) 9016 complex
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2021-06-15
Authors: Mosior, J.W., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 7n8m: PptT PAP(CoA) 8978B complex
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2021-06-15
Authors: Mosior, J.W., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 7n8n: Melbournevirus nucleosome like particle
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; Melbournevirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2021-06-15
Authors: Liu, Y., Toner, C.M., Zhou, K., Bowerman, S., Luger, K.
PDB entry 7n8o: High-resolution structure of photosystem II from the mesophilic cyanobacterium, Synechocystis sp. PCC 6803
Classification: PHOTOSYNTHESIS
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.93 Å
Deposited: 2021-06-15
Authors: Gisriel, C.J., Brudvig, G.W.
PDB entry 7n8p: CLC-ec1 at pH 4.5 100mM Cl Swap
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2021-06-15
Authors: Fortea, E., Boudker, O., Accardi, A.
PDB entry 7n8q: Rhesusized RV305 DH677.3 Fab bound to Clade A/E 93TH057 HIV-1 gp120 core.
Classification: IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-06-15
Authors: Tolbert, W.D., Pazgier, M.
PDB entry 7n8r: FGTGFG segment from the Nucleoporin p54, residues 63-68
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2021-06-15
Authors: Hughes, M.P., Sawaya, M.R., Eisenberg, D.S.
PDB entry 7n8s: LINE-1 endonuclease domain complex with DNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2021-06-15
Authors: Korolev, S., Miller, I.
PDB entry 7n8t: Crystal Structure of AMP-bound Human JNK2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2021-06-15
Authors: Li, L., Gurbani, D., Westover, K.D.
PDB entry 7n8u: Crystal structure of Triosephosphate isomerase from Candidatus Prometheoarchaeum syntrophicum
Classification: ISOMERASE
Source organism: Candidatus Prometheoarchaeum syntrophicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2021-06-15
Authors: Vickers, C.J., Patrick, W.M., Fraga, D.
PDB entry 7n8v: Crystal structure of free ERI2 nuclease
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-06-15
Authors: Thapar, R., Arvai, A.S., Tainer, J.A.
PDB entry 7n8w: Crystal structure of ERI2 nuclease bound to rAMP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-06-15
Authors: Thapar, R., Arvai, A.S., Tainer, J.A.
PDB entry 7n8x: Partial C. difficile TcdB and CSPG4 fragment
Classification: TOXIN/Developmental Protein
Source organism: Clostridioides difficile; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2021-06-16
Authors: Jiang, M., Zhang, J.
PDB entry 7n8y: Oxidized PheRS G318W from Salmonella enterica serovar Typhimurium
Classification: RNA BINDING PROTEIN,LIGASE
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2021-06-16
Authors: Srinivas, P., Dunham, C.M.
PDB entry 7n91: P70 S6K1 IN COMPLEX WITH MSC2317067A-1
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-06-16
Authors: Mochalkin, I.
PDB entry 7n93: P70 S6K1 IN COMPLEX WITH MSC2363318A-1
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2021-06-16
Authors: Mochalkin, I.
PDB entry 7n94: LINE-1 endonuclease domain complex with DNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-06-16
Authors: Korolev, S., Miller, I.
PDB entry 7n95: state 1 of TcdB and FZD2 at pH5
Classification: TOXIN
Source organism: Clostridioides difficile; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2021-06-16
Authors: Jiang, M., Zhang, J.
PDB entry 7n96: Crystal structure of D103A human Galectin-7 mutant
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2021-06-16
Authors: Pham, N.T.H., Calmettes, C., Doucet, N.
PDB entry 7n97: State 2 of TcdB and FZD2 at pH5
Classification: TOXIN/Developmental Protein
Source organism: Clostridioides difficile; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.1 Å
Deposited: 2021-06-17
Authors: Jiang, M., Zhang, J.
PDB entry 7n98: Cryo-EM structure of MFSD2A
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-06-17
Authors: Zhang, J., Feng, L.
PDB entry 7n99: SDE2 SAP domain apo structure
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2021-06-17
Authors: Paung, Y., Weinheimer, A.S., Rageul, J., Khan, A., Ho, B., Tong, M., Alphonse, S., Seeliger, M.A., Kim, H.
PDB entry 7n9a: Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS RBD with NB21
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2021-06-17
Authors: Sun, D., Zhang, C., Shi, Y.
PDB entry 7n9b: Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB21
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2021-06-17
Authors: Sun, D., Zhang, C., Shi, Y.
PDB entry 7n9c: Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB95
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2021-06-17
Authors: Sun, D., Zhang, C., Shi, Y.
PDB entry 7n9d: I74A mutant of the isopentenyl phosphate kinase from Candidatus methanomethylophilus alvus
Classification: TRANSFERASE
Source organism: Candidatus Methanomethylophilus alvus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-06-17
Authors: Thomas, L.M., Singh, S., Johnson, B.P.
PDB entry 7n9e: Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB34
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2021-06-17
Authors: Sun, D., Zhang, C., Shi, Y.
PDB entry 7n9f: Structure of the in situ yeast NPC
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 37 Å
Deposited: 2021-06-17
Authors: Villa, E., Singh, D., Ludtke, S.J., Akey, C.W., Rout, M.P., Echeverria, I., Suslov, S.
PDB entry 7n9g: Crystal structure of the Abl 1b Kinase domain in complex with Dasatinib and Imatinib
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-06-17
Authors: Miller, D.J., Xie, T.
PDB entry 7n9h: Structure of the mammalian importin a1 bound to the TDP-43 NLS
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-06-17
Authors: Doll, S.G., Lokareddy, R.K., Cingolani, G.
PDB entry 7n9i: 1.4A Structure of Drosophila melanogaster Frataxin
Classification: METAL TRANSPORT, Oxidoreductase
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-06-17
Authors: Brunzelle, J.S., Stemmler, T.L.
PDB entry 7n9j: Crystal structure of H2DB in complex with HSF2 melanoma neoantigen
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2021-06-18
Authors: Patskovsky, Y., Finnigan, J., Patskovska, L., Newman, J., Bhardwaj, N., Krogsgaard, M.
PDB entry 7n9k: KirBac3.1 L124M mutant
Classification: MEMBRANE PROTEIN
Source organism: Magnetospirillum magnetotacticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2021-06-18
Authors: Black, T.A., Gulbis, J.M.
PDB entry 7n9l: KirBac3.1 C71S C262S
Classification: MEMBRANE PROTEIN
Source organism: Magnetospirillum magnetotacticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-06-18
Authors: Gulbis, J.M., Black, K.A.
PDB entry 7n9o: Estrogen Receptor Alpha Ligand Binding Domain in Complex with Aliphatic SERD S-C10(15)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-06-18
Authors: Diennet, M., El Ezzy, M., Thiombane, K., Cotnoir-White, D., Poupart, J., Gao, Z., Mendoza, S.R., Marinier, A., Gleason, J., Mader, S.C., Fanning, S.W.
PDB entry 7n9q: State 3 of TcdB and FZD2 at pH5
Classification: HYDROLASE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2021-06-18
Authors: Jiang, M., Zhang, J.
PDB entry 7n9r: state 4 of TcdB and FZD2 at pH5
Classification: HYDROLASE
Source organism: Clostridioides difficile
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.9 Å
Deposited: 2021-06-18
Authors: Jiang, M., Zhang, J.
PDB entry 7n9s: TcdB and frizzled-2 CRD complex
Classification: SIGNALING PROTEIN/Hydrolase
Source organism: Clostridioides difficile; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.1 Å
Deposited: 2021-06-18
Authors: Jiang, M., Zhang, J.
PDB entry 7n9t: CryoEM structure of SARS-CoV-2 Spike in complex with Nb17
Classification: ANTIVIRAL PROTEIN/VIRAL PROTEIN
Source organism: Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2021-06-18
Authors: Huang, W., Taylor, D.