LiteFold/PDB huggingface dataset:
PDB entry 4w84: Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in the native form
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2014-08-22
Authors: Santos, C.R., Cordeiro, R.L., Wong, D.W.S., Murakami, M.T.
PDB entry 4w85: Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with glucose
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2014-08-22
Authors: Santos, C.R., Cordeiro, R.L., Wong, D.W.S., Murakami, M.T.
PDB entry 4w86: Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with glucose and TRIS
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2014-08-22
Authors: Santos, C.R., Cordeiro, R.L., Wong, D.W.S., Murakami, M.T.
PDB entry 4w87: Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from metagenomic library, in complex with a xyloglucan oligosaccharide
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2014-08-22
Authors: Santos, C.R., Cordeiro, R.L., Wong, D.W.S., Murakami, M.T.
PDB entry 4w88: Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in complex with a xyloglucan oligosaccharide and TRIS
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2014-08-22
Authors: Santos, C.R., Cordeiro, R.L., Wong, D.W.S., Murakami, M.T.
PDB entry 4w89: Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from metagenomic library, in complex with cellotriose
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-08-22
Authors: Santos, C.R., Cordeiro, R.L., Wong, D.W.S., Murakami, M.T.
PDB entry 4w8a: Crystal structure of XEG5B, a GH5 xyloglucan-specific beta-1,4-glucanase from ruminal metagenomic library, in the native form
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2014-08-22
Authors: Santos, C.R., Cordeiro, R.L., Wong, D.W.S., Murakami, M.T.
PDB entry 4w8b: Crystal structure of XEG5B, a GH5 xyloglucan-specific beta-1,4-glucanase from ruminal metagenomic library, in complex with XXLG
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2014-08-22
Authors: Santos, C.R., Cordeiro, R.L., Wong, D.W.S., Murakami, M.T.
PDB entry 4w8c: Crystal structure of the helical domain deleted form MsrA from Clostridium oremlandii
Classification: OXIDOREDUCTASE
Source organism: Alkaliphilus oremlandii OhILAs
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7568 Å
Deposited: 2014-08-23
Authors: Lee, E.H., Hwang, K.Y., Kim, H.-Y.
PDB entry 4w8d: Crystal structure of MST3 with a pyrrolopyrimidine inhibitor (PF-06454589).
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2014-08-24
Authors: Jasti, J., Song, X., Griffor, M., Kurumbail, R.G.
PDB entry 4w8e: Structure of MST3 with a pyrrolopyrimidine inhibitor (PF-06645342)
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2014-08-24
Authors: Jasti, J., Song, X., Griffor, M., Kurumbail, R.G.
PDB entry 4w8f: Crystal structure of the dynein motor domain in the AMPPNP-bound state
Classification: MOTOR PROTEIN
Source organism: Enterobacteria phage T4; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.541 Å
Deposited: 2014-08-24
Authors: Cheng, H.-C., Bhabha, G., Zhang, N., Vale, R.D.
PDB entry 4w8g: Crystal structure of the TIR domain of the Toll-related Receptor TRR-2 from the lower metazoan Hydra magnipapillata (crystal form I)
Classification: SIGNALING PROTEIN
Source organism: Hydra vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-08-24
Authors: Weisse, R.H.-J., Scheidig, A.J.
PDB entry 4w8h: Crystal structure of the TIR domain of the Toll-related Receptor TRR-2 from the lower metazoan Hydra magnipapillata (crystal form II)
Classification: SIGNALING PROTEIN
Source organism: Hydra vulgaris; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2014-08-24
Authors: Weisse, R.H.-J., Scheidig, A.J.
PDB entry 4w8i: Crystal structure of LpSPL/Lpp2128, Legionella pneumophila sphingosine-1 phosphate lyase
Classification: LYASE
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2014-08-24
Authors: Stogios, P.J., Daniels, C., Skarina, T., Cuff, M., Di Leo, R., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4w8j: Structure of the full-length insecticidal protein Cry1Ac reveals intriguing details of toxin packaging into in vivo formed crystals
Classification: TOXIN
Source organism: Bacillus thuringiensis serovar kurstaki str. HD73
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2014-08-25
Authors: Evdokimov, A.G., Moshiri, F., Sturman, E.J., Rydel, T.J., Zheng, M., Seale, J.W., Franklin, S.
PDB entry 4w8k: Crystal structure of a putative Cas1 enzyme from Vibrio phage ICP1
Classification: VIRAL PROTEIN
Source organism: Vibrio phage ICP1_2005_A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2014-08-25
Authors: Stogios, P.J., Wawrzak, Z., Onopriyeno, O., Yim, V., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4w8l: Structure of GH10 from Paenibacillus barcinonensis
Classification: HYDROLASE
Source organism: Paenibacillus barcinonensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2014-08-25
Authors: Sainz-Polo, M.A., Sanz-Aparicio, J.
PDB entry 4w8n: The crystal structure of hemagglutinin from a swine influenza virus (A/swine/Missouri/2124514/2006)
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2014-08-25
Authors: Yang, H., Carney, P.J., Tumpey, T.M., Stevens, J.
PDB entry 4w8o: Structure of the luciferase-like enzyme from the nonluminescent Zophobas morio mealworm
Classification: OXIDOREDUCTASE
Source organism: Zophobas atratus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-08-25
Authors: Santos, C.R., Prado, R.A., Viviani, V., Murakami, M.T.
PDB entry 4w8p: Crystal structure of RIAM TBS1 in complex with talin R7R8 domains
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-08-25
Authors: Chang, Y.C.E., Zhang, H., Wu, J.
PDB entry 4w8q: Crystal structure of truncated hemolysin A from P. mirabilis at 1.4 Angstroms resolution
Classification: TOXIN
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.428 Å
Deposited: 2014-08-26
Authors: Novak, W.R.P., Glasgow, E., Thompson, J.R., Weaver, T.M.
PDB entry 4w8r: Crystal structure of hemolysin A Y134F from P. mirabilis at 1.5 Angstroms resolution
Classification: TOXIN
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.519 Å
Deposited: 2014-08-26
Authors: Novak, W.R.P., Glasgow, E., Thompson, J.R., Weaver, T.M.
PDB entry 4w8s: Crystal structure of truncated hemolysin A Q125S/Y134S from P. mirabilis at 1.5 Angstroms resolution
Classification: TOXIN
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.511 Å
Deposited: 2014-08-26
Authors: Novak, W.R.P., Glasgow, E., Thompson, J.R., Weaver, T.M.
PDB entry 4w8t: Crystal structure of truncated hemolysin A Q125S from P. mirabilis at 1.5 Angstroms resolution
Classification: TOXIN
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.539 Å
Deposited: 2014-08-26
Authors: Novak, W.R.P., Glasgow, E., Thompson, J.R., Weaver, T.M.
PDB entry 4w8v: Crystal structure of Cmr6 from Pyrococcus furiosus
Classification: RNA BINDING PROTEIN
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2014-08-26
Authors: Benda, C., Ebert, J., Baumgaertner, M., Conti, E.
PDB entry 4w8w: Crystal structure of oligomeric Cmr4 from Pyrococcus furiosus
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.803 Å
Deposited: 2014-08-26
Authors: Benda, C., Ebert, J., Baumgaertner, M., Conti, E.
PDB entry 4w8x: Crystal Structure of Cmr1 from Pyrococcus furiosus bound to a nucleotide
Classification: RNA BINDING PROTEIN
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2014-08-26
Authors: Benda, C., Ebert, J., Baumgaertner, M., Conti, E.
PDB entry 4w8y: Structure of full length Cmr2 from Pyrococcus furiosus (Manganese bound form)
Classification: RNA BINDING PROTEIN
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2014-08-26
Authors: Benda, C., Ebert, J., Baumgaertner, M., Conti, E.
PDB entry 4w8z: Crystal structure of Cmr1 from Pyrococcus furiosus (apo form)
Classification: RNA BINDING PROTEIN
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-08-26
Authors: Benda, C., Ebert, J., Baumgaertner, M., Conti, E.
PDB entry 4w90: Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO
Classification: rna binding protein/rna
Source organism: BACILLUS SUBTILIS; Homo Sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.118 Å
Deposited: 2014-08-26
Authors: Jones, C.P., Ferre-D'Amare, A.R.
PDB entry 4w91: Crystal structure of a cysteine desulfurase SufS from Brucella suis bound to PLP
Classification: TRANSFERASE
Source organism: Brucella suis bv. 4 str. 40
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2014-08-26
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4w92: Crystal structure of Bacillus subtilis cyclic-di-AMP riboswitch ydaO
Classification: rna binding protein/rna
Source organism: Bacillus subtilis; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.209 Å
Deposited: 2014-08-26
Authors: Jones, C.P., Ferre-D'Amare, A.R.
PDB entry 4w93: Human pancreatic alpha-amylase in complex with montbretin A
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.352 Å
Deposited: 2014-08-27
Authors: Williams, L.K., Caner, S., Brayer, G.D.
PDB entry 4w94: Crystal structure of cross-linked tetragonal hen egg white lysozyme soaked with 5mM [Ru(CO)3Cl2]2
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2014-08-27
Authors: Tabe, H., Fujita, K., Abe, S., Tsujimoto, M., Kuchimaru, T., Kizaka-Kondo, S., Takano, M., Kitagawa, S., Ueno, T.
PDB entry 4w96: Crystal structure of cross-linked tetragonal hen egg white lysozyme soaked with 5mM [Ru(CO)3Cl2]2 followed by the reaction in deoxy-myoglobin solution
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-08-27
Authors: Tabe, H., Fujita, K., Abe, S., Tsujimoto, M., Kuchimaru, T., Kizaka-Kondo, S., Takano, M., Kitagawa, S., Ueno, T.
PDB entry 4w97: Structure of ketosteroid transcriptional regulator KstR2 of Mycobacterium tuberculosis
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-08-27
Authors: Stogios, P.J., Evdokimova, E., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4w98: Acinetobacter baumannii SDF NDK
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii SDF
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2014-08-27
Authors: Hu, Y., Feng, F., Liang, H., Liu, Y.
PDB entry 4w99: Apo-structure of the Y79F,W322E-double mutant of Etr1p
Classification: OXIDOREDUCTASE
Source organism: Candida tropicalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-08-27
Authors: Quade, N., Voegeli, B., Rosenthal, R., Erb, T.J.
PDB entry 4w9a: Crystal structure of Gamma-B Crystallin expressed in E. coli based on mRNA variant 2
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2014-08-27
Authors: Kudlinzki, D., Buhr, F., Linhard, V.L., Jha, S., Komar, A.A., Schwalbe, H.
PDB entry 4w9b: Crystal structure of Gamma-B Crystallin expressed in E. coli based on mRNA variant 1
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.279 Å
Deposited: 2014-08-27
Authors: Kudlinzki, D., Buhr, F., Linhard, V.L., Jha, S., Komar, A.A., Schwalbe, H.
PDB entry 4w9c: pVHL:EloB:EloC in complex with (2S,4R)-1-(3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(oxazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 2)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-27
Authors: Gadd, M.S., Hewitt, S., Galdeano, C., van Molle, I., Ciulli, A.
PDB entry 4w9d: pVHL:EloB:EloC in complex with (2S,4R)-1-(3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methyloxazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 3)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-27
Authors: Gadd, M.S., Hewitt, S., Galdeano, C., van Molle, I., Ciulli, A.
PDB entry 4w9e: pVHL:EloB:EloC in complex with (2S,4R)-1-(3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(thiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 4)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-08-27
Authors: Gadd, M.S., Soares, P., Galdeano, C., van Molle, I., Ciulli, A.
PDB entry 4w9f: pVHL:EloB:EloC in complex with (2S,4R)-1-(3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 5)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-08-27
Authors: van Molle, I., Hewitt, S., Galdeano, C., Gadd, M.S., Ciulli, A.
PDB entry 4w9g: pVHL:EloB:EloC in complex with (2S,4R)-1-(3,3-dimethylbutanoyl)-4-hydroxy-N-(3-methyl-4-(thiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 6)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-08-27
Authors: Gadd, M.S., Soares, P., Galdeano, C., van Molle, I., Ciulli, A.
PDB entry 4w9h: pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-acetamido-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 7)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-08-27
Authors: Gadd, M.S., Soares, P., Galdeano, C., van Molle, I., Ciulli, A.
PDB entry 4w9i: pVHL:EloB:EloC in complex with (2S,4R)-1-((2S,4R)-1-acetyl-4-hydroxypyrrolidine-2-carbonyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 10)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-08-27
Authors: Gadd, M.S., Soares, P., Galdeano, C., van Molle, I., Ciulli, A.
PDB entry 4w9j: pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-((S)-2-acetamido-4-methylpentanamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 13)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-27
Authors: Gadd, M.S., Galdeano, C., van Molle, I., Ciulli, A.
PDB entry 4w9k: pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-((S)-2-acetamido-3-phenylpropanamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 14)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-08-27
Authors: Gadd, M.S., Galdeano, C., van Molle, I., Ciulli, A.
PDB entry 4w9l: pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-((S)-2-acetamido-3,3-dimethylbutanamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 15)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-27
Authors: Gadd, M.S., Galdeano, C., van Molle, I., Ciulli, A.
PDB entry 4w9m: AMPPNP bound Rad50 in complex with dsDNA
Classification: HYDROLASE
Source organism: Thermotoga maritima MSB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-08-27
Authors: Rojowska, A., Lammens, K.
PDB entry 4w9n: Enoyl-acyl carrier protein-reductase domain from human fatty acid synthase complexed with triclosan
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2014-08-27
Authors: Sippel, K.H., Vyas, N.K., Sankaran, B., Quiocho, F.A.
PDB entry 4w9o: The Fk1 domain of FKBP51 in complex with (1S,5S,6R)-10-[(3,5-dichlorophenyl)sulfonyl]-5-[(1R)-1,2-dihydroxyethyl]-3-[2-(3,4-dimethoxyphenoxy)ethyl]-3,10-diazabicyclo[4.3.1]decan-2-one
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2014-08-27
Authors: Pomplun, S., Wang, Y., Kirschner, K., Kozany, C., Bracher, A., Hausch, F.
PDB entry 4w9p: The Fk1 domain of FKBP51 in complex with (1S,5S,6R)-10-[(3,5-dichlorophenyl)sulfonyl]-5-[(1S)-1,2-dihydroxyethyl]-3-[2-(3,4-dimethoxyphenoxy)ethyl]-3,10-diazabicyclo[4.3.1]decan-2-one
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-08-27
Authors: Pomplun, S., Wang, Y., Kirschner, K., Kozany, C., Bracher, A., Hausch, F.
PDB entry 4w9q: The Fk1 domain of FKBP51 in complex with (1S,5S,6R)-10-[(3,5-dichlorophenyl)sulfonyl]-3-[2-(3,4-dimethoxyphenoxy)ethyl]-5-ethyl-3,10-diazabicyclo[4.3.1]decan-2-one
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2014-08-27
Authors: Pomplun, S., Wang, Y., Kirschner, K., Kozany, C., Bracher, A., Hausch, F.
PDB entry 4w9r: Crystal structure of uncharacterised protein Coch_1243 from Capnocytophaga ochracea DSM 7271
Classification: Structural Genomics, Unknown Function
Source organism: Capnocytophaga ochracea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.703 Å
Deposited: 2014-08-27
Authors: Chang, C., Wu, R., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4w9s: 2-(4-(1H-tetrazol-5-yl)phenyl)-5-hydroxypyrimidin-4(3H)-one bound to influenza 2009 H1N1 endonuclease
Classification: transcription/transcription inhibitor
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-27
Authors: Bauman, J.D., Patel, D., Das, K., Arnold, E.
PDB entry 4w9t: Crystal structure of HisAP from Streptomyces sp. Mg1
Classification: ISOMERASE
Source organism: Streptomyces sp. Mg1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2014-08-27
Authors: MICHALSKA, K., VERDUZCO-CASTRO, E.A., ENDRES, M., BARONA-GOMEZ, F., JOACHIMIAK, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4w9u: Crystal Structure of an Acyl-CoA dehydrogenase from Brucella melitensis
Classification: OXIDOREDUCTASE
Source organism: Brucella abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-08-27
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4w9w: Crystal Structure of BMP-2-inducible kinase in complex with small molecule AZD-7762
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2014-08-28
Authors: Sorrell, F.J., Elkins, J.M., Krojer, T., Savitsky, P., Williams, E., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 4w9x: Crystal Structure of BMP-2-inducible kinase in complex with baricitinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2014-08-28
Authors: Sorrell, F.J., Elkins, J.M., Krojer, T., Williams, E., Savitsky, P., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 4w9y: X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a glutamyl sulfamide inhibitor CJC47
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2014-08-28
Authors: Pavlicek, J., Barinka, C.
PDB entry 4w9z: Crystal structure of the periplasmic domain of subunit II of cytochrome oxidase (CoxB) of Bradyrhizobium japonicum
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium diazoefficiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2014-08-28
Authors: Quade, N., Abicht, H.K., Hennecke, H., Glockshuber, R.
PDB entry 4wa0: The structure of a possible adhesin C-terminal domain from Caldicellulosiruptor kronotskyensis
Classification: CELL ADHESION
Source organism: Caldicellulosiruptor kronotskyensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-08-28
Authors: Alahuhta, P.M., Lunin, V.V.
PDB entry 4wa1: The crystal structure of hemagglutinin from a H3N8 influenza virus isolated from New England harbor seals
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/harbor seal/Massachusetts/1/2011(H3N8))
Experimental method: X-RAY DIFFRACTION
Resolution: 1.898 Å
Deposited: 2014-08-28
Authors: Yang, H., Villanueva, J.M., Gubareva, L.V., Stevens, J.
PDB entry 4wa2: The crystal structure of hemagglutinin from a H3N8 influenza virus isolated from New England harbor seals in complex with 3'SLN
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/harbor seal/Massachusetts/1/2011(H3N8))
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-08-28
Authors: Yang, H., Villanueva, J.M., Gubareva, L.V., Stevens, J.
PDB entry 4wa3: The crystal structure of neuraminidase from a H3N8 influenza virus isolated from New England harbor seals
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/harbor seal/Massachusetts/1/2011(H3N8))
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2014-08-28
Authors: Yang, H., Villanueva, J.M., Gubareva, L.V., Stevens, J.
PDB entry 4wa4: The crystal structure of neuraminidase from a H3N8 influenza virus isolated from New England harbor seals in complex with oseltamivir carboxylate
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Influenza A virus (A/harbor seal/Massachusetts/1/2011(H3N8))
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-08-28
Authors: Yang, H., Villanueva, J.M., Gubareva, L.V., Stevens, J.
PDB entry 4wa5: The crystal structure of neuraminidase from a H3N8 influenza virus isolated from New England harbor seals in complex with zanamivir
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Influenza A virus (A/harbor seal/Massachusetts/1/2011(H3N8))
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-08-28
Authors: Yang, H., Villanueva, J.M., Gubareva, L.V., Stevens, J.
PDB entry 4wa6: Structure of yeast SAGA DUBm with Sgf73 N59D mutant at 2.36 angstroms resolution
Classification: hydrolase/transcription
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2014-08-28
Authors: Wolberger, C., Yan, M.
PDB entry 4wa7: Crystal Structure of a GDP-bound Q61L Oncogenic Mutant of Human GT- Pase KRas
Classification: signaling protein, hydrolase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.986 Å
Deposited: 2014-08-28
Authors: Hunter, J.C., Manandhar, A., Gurbani, D., Chen, Z., Westover, K.D.
PDB entry 4wa8: Methanopyrus Kandleri FEN-1 nuclease
Classification: HYDROLASE
Source organism: Methanopyrus kandleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-28
Authors: Shah, S., Dunten, P., Horton, N.C.
PDB entry 4wa9: The crystal structure of human abl1 wild type kinase domain in complex with axitinib
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-28
Authors: Johnson, E., McTigue, M., Cronin, C.N.
PDB entry 4waa: Crystal structure of Nix LIR-fused human LC3B_2-119
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2014-08-29
Authors: Suzuki, H., Ravichandran, A.C., Dobson, R.C.J., Novak, I., Wakatsuki, S.
PDB entry 4wab: Crystal structure of mPGES1 solved by native-SAD phasing
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.704 Å
Deposited: 2014-08-29
Authors: Weinert, T., Li, D., Howe, N., Caffrey, M., Wang, M.
PDB entry 4wac: Crystal Structure of TarM
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-08-29
Authors: Koc, C., Stehle, T., Xia, G., Peschel, A.
PDB entry 4wad: Crystal Structure of TarM with UDP-GlcNAc
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-08-29
Authors: Koc, C., Stehle, T., Xia, G., Peschel, A.
PDB entry 4wae: Phosphatidylinositol 4-kinase III beta crystallized with ATP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.318 Å
Deposited: 2014-08-29
Authors: Chalupska, D., Boura, E.
PDB entry 4waf: Crystal Structure of a novel tetrahydropyrazolo[1,5-a]pyrazine in an engineered PI3K alpha
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2014-08-29
Authors: Knapp, M.S., Elling, R.A.
PDB entry 4wag: Phosphatidylinositol 4-kinase III beta crystallized with MI103 inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.407 Å
Deposited: 2014-08-29
Authors: Chalupska, D., Boura, E.
PDB entry 4wai: Structural characterization of the late competence protein ComFB from Bacillus subtilis.
Classification: METAL BINDING PROTEIN
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.427 Å
Deposited: 2014-08-29
Authors: Sysoeva, T.A., Bane, L.B., Xiao, D., Gaudet, R., Burton, B.M.
PDB entry 4waj: H. influenzae beta-carbonic anhydase variant P48S/A49P
Classification: LYASE
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-08-29
Authors: Rowlett, R.S., Hoffmann, K.M.
PDB entry 4wak: H. influenzae beta-carbonic anhydrase variant W39V/G41A
Classification: LYASE
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2014-08-29
Authors: Hoffmann, K.M., Rowlett, R.S.
PDB entry 4wal: Crystal structure of selenomethionine Msl5 protein in complex with RNA at 2.2 A
Classification: PROTEIN BINDING/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-29
Authors: Jacewicz, A., Smith, P., Chico, L., Schwer, B., Shuman, S.
PDB entry 4wam: H. influenzae beta-carbonic anhydrase variant W39V/G41A/P48S/A49P
Classification: LYASE
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-08-29
Authors: Rowlett, R.S., Hoffman, K.M.
PDB entry 4wan: Crystal structure of Msl5 protein in complex with RNA at 1.8 A
Classification: PROTEIN BINDING/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-08-29
Authors: Jacewicz, A., Smith, P., Chico, L., Schwer, B., Shuman, S.
PDB entry 4was: STRUCTURE OF THE ETR1P/NADP/CROTONYL-COA COMPLEX
Classification: OXIDOREDUCTASE
Source organism: Candida tropicalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-08-31
Authors: Quade, N., Voegeli, B., Rosenthal, R., Capitani, G., Erb, T.J.
PDB entry 4wat: Crystal structure of PfRh5, an essential P. falciparum ligand for invasion of human erythrocytes
Classification: CELL INVASION
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2014-09-01
Authors: Chen, L.
PDB entry 4wau: Crystal structure of CENP-M solved by native-SAD phasing
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-09-01
Authors: Weinert, T., Basilico, F., Cecatiello, V., Pasqualato, S., Wang, M.
PDB entry 4wav: Crystal Structure of Haloquadratum walsbyi bacteriorhodopsin mutant D93N
Classification: TRANSPORT PROTEIN
Source organism: Haloquadratum walsbyi C23
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-09-02
Authors: Wang, A.H.J., Hsu, M.F., Yang, C.S., Fu, H.Y.
PDB entry 4wb0: Crystal structure of the broad specificity aminotransferase from Leishmania mexicana
Classification: TRANSFERASE
Source organism: Leishmania mexicana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2014-09-02
Authors: Wen, J., Nowicki, C., Blankenfeldt, W.
PDB entry 4wb2: Crystal structure of the mirror-image L-RNA/L-DNA aptamer NOX-D20 in complex with mouse C5a complement anaphylatoxin
Classification: DNA-RNA HYBRID
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-09-02
Authors: Yatime, L., Maasch, C., Hoehlig, K., Klussmann, S., Vater, A., Andersen, G.R.
PDB entry 4wb3: Crystal structure of the mirror-image L-RNA/L-DNA aptamer NOX-D20 in complex with mouse C5a-desArg complement anaphylatoxin
Classification: DNA-RNA HYBRID
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-09-02
Authors: Yatime, L., Maasch, C., Hoehlig, K., Klussmann, S., Vater, A., Andersen, G.R.
PDB entry 4wb4: wt SA11 NSP4_CCD
Classification: VIRAL PROTEIN
Source organism: Simian rotavirus A/SA11
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2014-09-02
Authors: Viskovska, M., Sastri, N.P., Hyser, J.M., Tanner, M.R., Horton, L.B., Sankaran, B., Prasad, B.V.V., Estes, M.K.
PDB entry 4wb5: Crystal structure of human cAMP-dependent protein kinase A (catalytic alpha subunit)
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.641 Å
Deposited: 2014-09-02
Authors: Cheung, J., Ginter, C., Cassidy, M., Franklin, M.C., Rudolph, M.J., Hendrickson, W.A.
PDB entry 4wb6: Crystal structure of a L205R mutant of human cAMP-dependent protein kinase A (catalytic alpha subunit)
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-09-02
Authors: Cheung, J., Ginter, C., Cassidy, M., Franklin, M.C., Rudolph, M.J., Hendrickson, W.A.
PDB entry 4wb7: Crystal structure of a chimeric fusion of human DnaJ (Hsp40) and cAMP-dependent protein kinase A (catalytic alpha subunit)
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-09-02
Authors: Cheung, J., Ginter, C., Cassidy, M., Franklin, M.C., Rudolph, M.J., Hendrickson, W.A.
PDB entry 4wb8: Crystal structure of human cAMP-dependent protein kinase A (catalytic alpha subunit), exon 1 deletion
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2014-09-02
Authors: Cheung, J., Ginter, C., Cassidy, M., Franklin, M.C., Rudolph, M.J., Hendrickson, W.A.
PDB entry 4wb9: Human ALDH1A1 complexed with NADH
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2014-09-02
Authors: Morgan, C.A., Hurley, T.D.
PDB entry 4wba: Q/E mutant SA11 NSP4_CCD
Classification: VIRAL PROTEIN
Source organism: Simian rotavirus A/SA11
Experimental method: X-RAY DIFFRACTION
Resolution: 1.799 Å
Deposited: 2014-09-02
Authors: Viskovska, M., Sastri, N.P., Hyser, J.M., Tanner, M.R., Horton, L.B., Sankaran, B., Prasad, B.V.V., Estes, M.K.
PDB entry 4wbb: Single Turnover Autophosphorylation Cycle of the PKA RIIb Holoenzyme
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-09-02
Authors: Zhang, P., Knape, M.J., Ahuja, L.G., Keshwani, M.M., King, C.C., Sastri, M., Herberg, F.W., Taylor, S.S.
PDB entry 4wbc: 2.13 A STRUCTURE OF A KUNITZ-TYPE WINGED BEAN CHYMOTRYPSIN INHIBITOR PROTEIN
Classification: SERINE PROTEASE INHIBITOR
Source organism: Psophocarpus tetragonolobus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.138 Å
Deposited: 1999-03-04
Authors: Ravichandran, S., Sen, U., Chakrabarti, C., Dattagupta, J.K.
PDB entry 4wbd: The crystal structure of BshC from Bacillus subtilis complexed with citrate and ADP
Classification: LIGASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2014-09-03
Authors: Cook, P.D., VanDuinen, A.J., Winchell, K.R.
PDB entry 4wbe: Crystal structure of the HR-1 domain of human caprin-1 in the C121 space group
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-09-03
Authors: Wu, Y., Zhu, J., Huang, X., Du, Z.
PDB entry 4wbf: Acinetobacter baumannii SDF NDK
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2014-09-03
Authors: Hu, Y., Liu, Y.
PDB entry 4wbg: Crystal structure of class C beta-lactamase Mox-1 covalently complexed with aztorenam
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-09-03
Authors: Oguri, T., Shimizu-ibuka, A., Ishii, Y.
PDB entry 4wbh: STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM I APO - 2.2A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-09-03
Authors: Zebisch, M., Jones, E.Y.
PDB entry 4wbi: Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutations H230Q and H309Q
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-09-03
Authors: Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 4wbj: Crystal structure of Bradyrhizobium japonicum ScoI in the oxidized state
Classification: CHAPERONE
Source organism: Bradyrhizobium diazoefficiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2014-09-03
Authors: Quade, N., Abicht, H.K., Hennecke, H., Glockshuber, R.
PDB entry 4wbk: The 1.37 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with stearic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2014-09-03
Authors: Sugiyama, S., Matsuoka, S., Mizohata, E., Matsuoka, D., Murakami, S., Inoue, T., Murata, M.
PDB entry 4wbl: Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation F235A
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2014-09-03
Authors: Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 4wbo: Bovine G Protein Coupled Receptor Kinase 1 in Complex with Amlexanox
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2014-09-03
Authors: Homan, K.T., Tesmer, J.J.G.
PDB entry 4wbp: Crystal structure of the HR-1 domain of human caprin-1 in the P3121 space group
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-09-03
Authors: Wu, Y., Zhu, J., Huang, X., Du, Z.
PDB entry 4wbq: Crystal structure of the exonuclease domain of QIP (QDE-2 interacting protein) solved by native-SAD phasing.
Classification: RNA BINDING PROTEIN
Source organism: Neurospora crassa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.693 Å
Deposited: 2014-09-03
Authors: Boland, A., Weinert, T., Weichenrieder, O., Wang, M.
PDB entry 4wbr: Structure of Bradyrhizobium japonicum ScoI with copper bound
Classification: CHAPERONE
Source organism: Bradyrhizobium diazoefficiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2014-09-03
Authors: Quade, N., Abicht, H.K., Hennecke, H., Glockshuber, R.
PDB entry 4wbs: Crystal structure of an ABC transporter related protein from Burkholderia phymatum
Classification: TRANSPORT PROTEIN
Source organism: Burkholderia phymatum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-09-03
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4wbt: Crystal structure of histidinol-phosphate aminotransferase from Sinorhizobium meliloti in complex with pyridoxal-5'-phosphate
Classification: TRANSFERASE
Source organism: Rhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-09-03
Authors: Shabalin, I.G., Bacal, P., Kowalska, A.K., Cooper, D.R., Stead, M., Hammonds, J., Ahmed, M., Hillerich, B.S., Bonanno, J., Seidel, R., Almo, S.C., Minor, W., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4wbu: prion peptide
Classification: de novo protein, membrane protein
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2014-09-03
Authors: Yu, L., Lee, S.-J., Yee, V.
PDB entry 4wbv: Crystal structure of a prion peptide
Classification: de novo protein, membrane protein
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2014-09-03
Authors: Yu, L., Lee, S.-J., Yee, V.
PDB entry 4wbx: Conserved hypothetical protein PF1771 from Pyrococcus furiosus solved by sulfur SAD using Swiss Light Source data
Classification: OXIDOREDUCTASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2014-09-04
Authors: Weinert, T., Waltersperger, S., Olieric, V., Panepucci, E., Chen, L., Rose, J.P., Wang, M., Wang, B.C., Southeast Collaboratory for Structural Genomics (SECSG)
PDB entry 4wby: tRNA-processing enzyme (apo form I)
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomita, K.
PDB entry 4wbz: tRNA-processing enzyme (apo form 2)
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomtia, K.
PDB entry 4wc0: tRNA-processing enzyme with ATP
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomita, K.
PDB entry 4wc1: Structure of tRNA-processing enzyme with CTP
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomita, K.
PDB entry 4wc2: Crystal structure of tRNA nucleotidyltransferase complexed with a primer tRNA and an incoming ATP analog
Classification: TRANSFERASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomita, K.
PDB entry 4wc3: Structure of tRNA-processing enzyme complex 1
Classification: TRANSFERASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomita, K.
PDB entry 4wc4: tRNA-processing enzyme complex 2
Classification: TRANSFERASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.501 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomita, K.
PDB entry 4wc5: Structure of tRNA-processing enzyme complex 3
Classification: TRANSFERASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomita, K.
PDB entry 4wc6: Structure of tRNA-processing enzyme complex 4
Classification: TRANSFERASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.41 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomita, K.
PDB entry 4wc7: Structure of tRNA-processing enzyme complex 5
Classification: TRANSFERASE/RNA
Source organism: Aquifex aeolicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.102 Å
Deposited: 2014-09-04
Authors: Yamashita, S., Tomita, K.
PDB entry 4wc8: Heterogeneous dodecamer formed from macrocycles containing a sequence from beta-2-microglobulin(63-69).
Classification: IMMUNE SYSTEM
Experimental method: X-RAY DIFFRACTION
Resolution: 1.908 Å
Deposited: 2014-09-04
Authors: Spencer, R.K., Nowick, J.S.
PDB entry 4wc9: Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation F235L
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-09-04
Authors: Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 4wca: Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation H230Q, complexed with citrate
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-09-04
Authors: Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 4wcb: Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation H309Q
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2014-09-04
Authors: Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 4wcc: Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation P225G
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2014-09-04
Authors: Myllykoski, M., Raasakka, A., Kursula, P.
PDB entry 4wcd: Trypanosoma brucei PTR1 in complex with inhibitor 10
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2014-09-04
Authors: Mangani, S., Di Pisa, F., Pozzi, C.
PDB entry 4wce: The crystal structure of the large ribosomal subunit of Staphylococcus aureus
Classification: RIBOSOME
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.526 Å
Deposited: 2014-09-04
Authors: Eyal, Z., Matzov, D., Krupkin, M., Wekselman, I., Zimmerman, E., Rozenberg, H., Bashan, A., Yonath, A.
PDB entry 4wcf: Trypanosoma brucei PTR1 in complex with inhibitor 9
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2014-09-04
Authors: Mangani, S., Di Pisa, F., Pozzi, C.
PDB entry 4wcg: The binding mode of Cyprinid Herpesvirus3 ORF112-Zalpha to Z-DNA
Classification: DNA BINDING PROTEIN
Source organism: Cyprinid herpesvirus 3; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-09-04
Authors: Kus, K., Athanasiadis, A.
PDB entry 4wch: Structure of Isolated D Chain of Gigant Hemoglobin from Glossoscolex paulistus
Classification: OXYGEN STORAGE
Source organism: Glossoscolex paulistus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-09-04
Authors: Bachega, J.F.R., Maluf, F.V., Pereira, H.M., Brandao-Neto, J., Tabak, M., Garratt, R.C., Horjales, E.
PDB entry 4wci: Crystal structure of the 1st SH3 domain from human CD2AP (CMS) in complex with a proline-rich peptide (aa 378-393) from human RIN3
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2014-09-04
Authors: Rouka, E., Simister, P.C., Janning, M., Kirsch, K.H., Krojer, T., Knapp, S., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Feller, S.M., Structural Genomics Consortium (SGC)
PDB entry 4wcj: Structure of IcaB from Ammonifex degensii
Classification: HYDROLASE
Source organism: Ammonifex degensii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-09-04
Authors: Little, D.J., Bamford, N.C., Pokrovskaya, V., Robinson, H., Nitz, M., Howell, P.L.
PDB entry 4wck: Crystal Structure of apo Cell Shape Determinant protein Csd4 from Helicobacter pylori
Classification: HYDROLASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2014-09-05
Authors: Chan, A.C., Murphy, M.E.
PDB entry 4wcl: Crystal Structure of product bound Cell Shape Determinant protein Csd4 from Helicobacter pylori
Classification: HYDROLASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-09-05
Authors: Chan, A.C., Murphy, M.E.
PDB entry 4wcm: Crystal Structure of Cell Shape Determinant protein Csd4 Gln46His variant from Helicobacter pylori
Classification: HYDROLASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-09-05
Authors: Chan, A.C., Murphy, M.E.
PDB entry 4wcn: Crystal Structure of Tripeptide bound Cell Shape Determinant Csd4 protein from Helicobacter pylori
Classification: HYDROLASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-09-05
Authors: Chan, A.C., Murphy, M.E.
PDB entry 4wco: Crystal structure of extracellular domain of human lectin-like transcript 1 (LLT1), the ligand for natural killer receptor-P1A
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2014-09-05
Authors: Kita, S., Matsubara, H., Kasai, Y., Tamaoki, T., Okabe, Y., Fukuhara, H., Kamishikiryo, J., Ose, T., Kuroki, K., Maenaka, K.
PDB entry 4wct: The crystal structure of Fructosyl amine: oxygen oxidoreductase (Amadoriase I) from Aspergillus fumigatus
Classification: OXIDOREDUCTASE
Source organism: Neosartorya fumigata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2014-09-05
Authors: Rigoldi, F., Gautieri, A., Dalle Vedove, A., Lucarelli, A.P., Vesentini, S., Parisini, E.
PDB entry 4wcu: PDE4 complexed with inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2014-09-05
Authors: Sorensen, M.D.
PDB entry 4wcv: Haloalkane dehalogenase DhaA mutant from Rhodococcus rhodochrous (T148L+G171Q+A172V+C176G)
Classification: HYDROLASE
Source organism: Rhodococcus rhodochrous
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2014-09-05
Authors: Holubeva, T., Prudnikova, T., Kuta-Smatanova, I., Rezacova, P.