LiteFold/PDB huggingface dataset:
PDB entry 9asz: Crystal structure of SARS-CoV-2 3CL protease in complex with a phenylethyl 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-02-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9at0: Crystal structure of SARS-CoV-2 3CL protease in complex with a methylcyclohexyl 2-pyrrolidone inhibitor (S-enantiomer)
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9at1: Crystal structure of SARS-CoV-2 3CL protease in complex with a methylcyclohexyl 2-pyrrolidone inhibitor (R-enantiomer)
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-02-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9at2: Crystal Structure of human Tryptophan 2,3-dioxygenase in complex with PAN3 inhibitor
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-02-26
Authors: Geeraerts, Z., Yeh, S.-R.
PDB entry 9at3: Crystal structure of SARS-CoV-2 3CL protease in complex with an ethylcyclohexyl 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-02-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9at4: Crystal structure of SARS-CoV-2 3CL protease in complex with a methylbicyclo[2.2.1]heptane 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-02-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9at5: Crystal structure of SARS-CoV-2 3CL protease in complex with a 1-methyl-4,4-difluorocyclohexyl 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-02-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9at6: Crystal structure of SARS-CoV-2 3CL protease in complex with a methylbicyclo[2.2.1]heptene 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-02-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9at7: Crystal structure of SARS-CoV-2 3CL protease in complex with a 2,2-difluoro-5-methylbenzo[1,3]dioxole 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-02-26
Authors: Lovell, S., Cooper, A., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9at8: Fab 77-stabilized MeV F ectodomain fragment
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Measles virus strain Ichinose-B95a
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-02-26
Authors: Zyla, D., Saphire, E.O.
PDB entry 9at9: Crystal structure of Klebsiella pneumoniae FimH lectin domain bound to D-mannose
Classification: CELL ADHESION
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2024-02-26
Authors: Lopatto, E., Tamadonfar, K.O., Hultgren, S.J.
PDB entry 9ata: Crystal structure of MERS 3CL protease in complex with a phenylethyl 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-02-26
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9atb: cryo-EM of Cupriavidus gilardii flagellum
Classification: PROTEIN FIBRIL
Source organism: Cupriavidus gilardii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-02-26
Authors: Fields, J.L., Zhang, H., Halder, S.K., Wu, H., Wang, F.
PDB entry 9atc: ATCASE Y165F MUTANT
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 1998-06-26
Authors: Ha, Y., Allewell, N.M.
PDB entry 9atd: Crystal structure of MERS 3CL protease in complex with a ethylcyclohexyl 2-pyrrolidone inhibitor (S-enantiomer) inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-02-26
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9ate: Crystal structure of MERS 3CL protease in complex with a methylbicyclo[2.2.1]heptane 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-26
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9atf: Crystal structure of MERS 3CL protease in complex with a 1-methyl-4,4-difluorocyclohexyl 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-02-26
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9atg: Crystal structure of MERS 3CL protease in complex with a 2,2-difluoro-5-methylbenzo[1,3]dioxole 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-02-26
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9ath: Crystal structure of MERS 3CL protease in complex with a methylbicyclo[2.2.1]heptene 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-02-26
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9ati: Crystal structure of MERS 3CL protease in complex with a racemic bicyclo[2.2.1]heptenyl-methyl 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-02-26
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9atj: Crystal structure of MERS 3CL protease in complex with a m-chlorobenzyl 2-pyrrolidone inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-02-26
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9atk: BIFUNCTIONAL INHIBITION OF NEUTROPHIL ELASTASE AND CATHEPSIN G by Eap4 of S. aureus
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-02-27
Authors: Mishra, N.B., Herdendorf, T.J., Geisbrecht, B.V.
PDB entry 9atl: Cryo-EM of Stenotrophomonas maltophilia flagellum
Classification: PROTEIN FIBRIL
Source organism: Stenotrophomonas maltophilia
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2024-02-27
Authors: Fields, J.L., Zhang, H., Halder, S.K., Wu, H., Wang, F.
PDB entry 9atm: SARS-CoV-2 EG.5 RBD bound to the VIR-7229 and the S2H97 Fab fragments
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-02-27
Authors: Rietz, T., Park, Y.J., Errico, J., Czudnochowski, N., Nix, J.C., Corti, D., Snell, G., Marco, A.D., Pinto, D., Cameroni, E., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
PDB entry 9atn: NMR structure of the MLL4 PHD2/3 fingers in complex with ASXL2
Classification: TRANSFERASE/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-02-27
Authors: Zhang, Y., Zandian, M., Kutateladze, T.
PDB entry 9ato: XBB.1.5 spike/Nanosota-3C complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-02-27
Authors: Ye, G., Bu, F., Liu, B., Li, F.
PDB entry 9atp: local refinement of XBB.1.5 spike/Nanosota-3C complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-02-27
Authors: Ye, G., Bu, F., Liu, B., Li, F.
PDB entry 9atq: XBB.1.5 spike/Nanosota-8 complex
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-02-27
Authors: Ye, G., Bu, F., Liu, B., Li, F.
PDB entry 9atr: local refinement of XBB.1.5 spike/Nanosota-8 complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-02-27
Authors: Ye, G., Bu, F., Liu, B., Li, F.
PDB entry 9ats: Crystal structure of MERS 3CL protease in complex with a methylcyclohexyl 2-pyrrolidone inhibitor (S-enantiomer)
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-02-27
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9att: Crystal structure of MERS 3CL protease in complex with a methylcyclohexyl 2-pyrrolidone inhibitor (R-enantiomer)
Classification: HYDROLASE/INHIBITOR
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-02-27
Authors: Liu, L., Lovell, S., Battaile, K.P., Dampalla, C.S., Groutas, W.C.
PDB entry 9atu: Bifunctional Inhibition of Neutrophil Elastase by Eap4 from S. aureus
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-27
Authors: Mishra, N.B., Herdendorf, T.J., Geisbrecht, B.V.
PDB entry 9atv: X-ray co-crystal structure of NCGC00685960 / NCATS-SM9335 in NNMT
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.413 Å
Deposited: 2024-02-27
Authors: Olland, A., White, A., Suto, R.
PDB entry 9atw: Structure of biofilm-forming functional amyloid PSMa1 from Staphylococcus aureus
Classification: STRUCTURAL PROTEIN
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-02-27
Authors: Hansen, K.H., Byeon, C.H., Liu, Q., Drace, T., Boesen, T., Conway, J.F., Andreasen, M., Akbey, U.
PDB entry 9atx: AcpB protein from Bacillus anthracis, N-terminal part
Classification: TRANSCRIPTION
Source organism: Bacillus anthracis str. Ames
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-02-27
Authors: Osipiuk, J., Koehler, T.M., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9atz: HIV 16055.v8.3 SOSIP Env in Complex with V2 Epitope and Anti-Immune Complex pAbs from Rabbit 2464
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-02-27
Authors: Brown, S., Antansijevic, A., Ward, A.B.
PDB entry 9au0: Cryo-EM structure of the BW245C-bound prostaglandin D2 receptor (DP1)-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-02-27
Authors: Davoudinasab, B., Cherezov, V., Han, G.W., Kim, D.
PDB entry 9au1: SARS-CoV-2 XBB.1.5 RBD bound to the VIR-7229 and the S309 Fab fragments
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2024-02-27
Authors: Rietz, T., Park, Y.J., Errico, J., Czudnochowski, N., Nix, J.C., Corti, D., Snell, G., Marco, A.D., Pinto, D., Cameroni, E., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D., Structural Genomics Consortium (SGC)
PDB entry 9au2: VIR-7229 Fab fragment bound the BA.2.86 spike trimer (global refinement)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-28
Authors: Tortorici, M.A., Park, Y.J., Veelser, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9au3: Crystal structure of GenB2 in complex with G418
Classification: ANTIBIOTIC
Source organism: Micromonospora echinospora
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-02-28
Authors: De Oliveira, G.S., Bury, P.S., Huang, F., Li, Y., Araujo, N.C., Zhou, J., Sun, Y., Leeper, F., Leadlay, P., Dias, M.V.B.
PDB entry 9au4: Cryo-EM structure of a photosystem I variant containing an unusual plastoquinone derivative in its electron transfer chain
Classification: PHOTOSYNTHESIS
Source organism: Synechocystis sp. PCC 6803
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.03 Å
Deposited: 2024-02-28
Authors: Gisriel, C.J., Vasily, K., Iwig, D.F., Russell, B.P., Vinyard, D.J., Golbeck, J.H., Brudvig, G.W., Lakshmi, K.V.
PDB entry 9au5: Ternary complex of human DNA polymerase theta polymerase domain with a cognate C:G base pair
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-02-28
Authors: Li, C., Gao, Y.
PDB entry 9au6: Cryo-EM of Geovibrio thiophilus flagellum
Classification: PROTEIN FIBRIL
Source organism: Geovibrio thiophilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-02-28
Authors: Petersen, H.A., Fields, J.L., Wang, F.
PDB entry 9au7: Human Retriever VPS35L/VPS29/VPS26C complex bound to SNX17 peptide (Composite Map)
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-02-28
Authors: Chen, B., Chen, Z., Han, Y., Boesch, D.J., Juneja, P., Burstein, E., Fung, H.Y.J.
PDB entry 9au8: Ternary complex of human DNA polymerase theta polymerase domain with a mismatched T:T base pair
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-02-28
Authors: Li, C., Gao, Y.
PDB entry 9au9: Ternary complex of human DNA polymerase theta polymerase domain with a mismatched T:G base pair
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2024-02-28
Authors: Li, C., Gao, Y.
PDB entry 9aua: PLP-dependent BesB holoenzyme
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces achromogenes subsp. achromogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2024-02-28
Authors: Hedges, J.B., Ryan, K.S.
PDB entry 9aub: PLP-dependent BesB-F231Y variant holoenzyme
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces achromogenes subsp. achromogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2024-02-28
Authors: Hedges, J.B., Ryan, K.S.
PDB entry 9auc: Human Amylin1 Receptor in Complex with Gs and human Calcitonin Gene-Related Peptide
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-02-28
Authors: Cao, J., Belousoff, M.J., Wootten, D.L., Sexton, P.M.
PDB entry 9aud: Immune receptor complex
Classification: IMMUNE SYSTEM
Source organism: Influenza A virus H3N2; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-02-29
Authors: Chaurasia, P., Littler, D.R., La Gruta, N., Rossjohn, J.
PDB entry 9aue: Crystal structure of the holo form of GenB2 in complex with PMP
Classification: ANTIBIOTIC
Source organism: Micromonospora echinospora
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2024-02-29
Authors: Oliveira, G.S., Bury, P.S., Huang, F., Li, Y., Araujo, N.C., Zhou, J., Sun, Y., Leeper, F., Leadlay, P., Dias, M.V.B.
PDB entry 9auf: Cas9d 20bp R-loop Complex
Classification: DNA BINDING PROTEIN, RNA BINDING PROTEIN/DNA/RNA
Source organism: Deltaproteobacteria
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2024-02-29
Authors: Fregoso Ocampo, R., Taylor, D.W., Bravo, J.P.K.
PDB entry 9aug: Cryo-EM structure of CH848.d949.10.17.GS-DH270.UCA3.G57R
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-02-29
Authors: Zhang, Q.E., Acharya, P.
PDB entry 9auh: Cryo-EM structure of CH848.d949.10.17.GS-DH270.UCA3
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-02-29
Authors: Zhang, Q.E., Acharya, P.
PDB entry 9aui: Cryo-EM structure of CH848.d949.10.17.GS-DH270.UCA4
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-02-29
Authors: Zhang, Q.E., Acharya, P.
PDB entry 9auj: Structure of SARS-CoV-2 Mpro mutant (S144A) in complex with Nirmatrelvir (PF-07321332)
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.486 Å
Deposited: 2024-02-29
Authors: Gajiwala, K.S., Greasley, S.E., Ferre, R.A., Liu, W., Stewart, A.E.
PDB entry 9auk: Structure of SARS-CoV-2 Mpro mutant (A173V) in complex with Nirmatrelvir (PF-07321332)
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2024-02-29
Authors: Gajiwala, K.S., Greasley, S.E., Ferre, R.A., Liu, W., Stewart, A.E.
PDB entry 9aul: Structure of SARS-CoV-2 Mpro mutant (A173V,T304I)) in complex with Nirmatrelvir (PF-07321332)
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.421 Å
Deposited: 2024-02-29
Authors: Gajiwala, K.S., Greasley, S.E., Ferre, R.A., Liu, W., Stewart, A.E.
PDB entry 9aum: Structure of SARS-CoV-2 Mpro mutant (T21I,S144A,T304I) in complex with Nirmatrelvir (PF-07321332)
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.539 Å
Deposited: 2024-02-29
Authors: Gajiwala, K.S., Greasley, S.E., Ferre, R.A., Liu, W., Stewart, A.E.
PDB entry 9aun: Structure of SARS-CoV-2 Mpro mutant (T21I,T304I)
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2024-02-29
Authors: Gajiwala, K.S., Greasley, S.E., Ferre, R.A., Liu, W., Stewart, A.E.
PDB entry 9auo: Structure of SARS-CoV-2 Mpro mutant (L50F,T304I)
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.423 Å
Deposited: 2024-02-29
Authors: Gajiwala, K.S., Greasley, S.E., Ferre, R.A., Liu, W., Stewart, A.E.
PDB entry 9auq: Crystal structure of 4-Fluoro-tryptophan labeled Oscillatoria Agardhii agglutinin
Classification: SUGAR BINDING PROTEIN
Source organism: Planktothrix agardhii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2024-02-29
Authors: Runge, B.R., Zadorozhnyi, R.R., Quinn, C.M., Russell, R.W., Lu, M., Antolinez, S., Struppe, J., Schwieters, C.D., Byeon, I.L., Hadden-Perilla, J., Gronenborn, A.M., Polenova, T.
PDB entry 9aur: Crystal structure of loop-closed A21 2'-OMe dumbbell RNA bridged by glycine
Classification: RNA
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2024-02-29
Authors: Radakovic, A., Lewicka, A., Todisco, M., Aitken, H.R.M., Weiss, Z., Kim, S., Bannan, A., Piccirilli, J.A., Szostak, J.W.
PDB entry 9aus: Crystal structure of loop-closed dumbbell RNA bridged by glycine
Classification: RNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2024-02-29
Authors: Radakovic, A., Lewicka, A., Todisco, M., Aitken, H.R.M., Weiss, Z., Kim, S., Bannan, A., Piccirilli, J.A., Szostak, J.W.
PDB entry 9auu: Hsp90 NTD in complex with compound 6
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-02-29
Authors: Weaver, J.M., Craven, G.B., Taunton, J.
PDB entry 9auv: Crystal structure of A. baumannii GuaB dCBS with inhibitor GNE9123
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-03-01
Authors: Harris, S.F., Wu, P.
PDB entry 9auw: Crystal structure of A. baumannii GuaB dCBS with inhibitor GNE9979
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-03-01
Authors: Harris, S.F., Wu, P.
PDB entry 9aux: Crystal structure of A. baumannii GuaB dCBS with inhibitor GNE2011
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2024-03-01
Authors: Harris, S.F., Wu, P.
PDB entry 9auy: Crystal structure of S. aureus GuaB dCBS with inhibitor GNE9123
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-03-01
Authors: Harris, S.F., Wu, P.
PDB entry 9auz: Crystal structure of S. aureus GuaB dCBS with inhibitor GNE9979
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-03-01
Authors: Harris, S.F., Wu, P.
PDB entry 9av0: Crystal structure of S. aureus GuaB dCBS with inhibitor GNE2011
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-03-01
Authors: Harris, S.F., Wu, P.
PDB entry 9av1: Crystal structure of E. coli GuaB dCBS with inhibitor GNE9123
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-03-01
Authors: Harris, S.F., Wu, P.
PDB entry 9av2: Crystal structure of E. coli GuaB dCBS with inhibitor GNE9979
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-03-01
Authors: Harris, S.F., Wu, P.
PDB entry 9av3: Crystal structure of E. coli GuaB dCBS with inhibitor GNE2011
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2024-03-01
Authors: Harris, S.F., Wu, P.
PDB entry 9av4: Design and application of synthetic 17B-HSD13 substrates to drug discovery, and to reveal preserved catalytic activity of protective human variants
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-03-01
Authors: Liu, S.
PDB entry 9av5: Design and application of synthetic 17B-HSD13 substrates to drug discovery, and to reveal preserved catalytic activity of protective human variants
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.363 Å
Deposited: 2024-03-01
Authors: Liu, S., Garnsey, M.
PDB entry 9av6: Crystal structure of CMGC family protein kinase from Trichomonas vaginalis (Apo)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-03-01
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9av7: Crystal structure of CMGC family protein kinase from Trichomonas vaginalis (AMP-PNP)
Classification: TRANSFERASE
Source organism: Trichomonas vaginalis G3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-03-01
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 9av8: Design and application of synthetic 17B-HSD13 substrates to drug discovery, and to reveal preserved catalytic activity of protective human variants
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.592 Å
Deposited: 2024-03-01
Authors: Liu, S., Garnsey, M.
PDB entry 9av9: R2-state HbG-Makassar hemoglobin
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-03-01
Authors: Feliciano, P.R., Lee, S.J.
PDB entry 9ava: Co-crystal structure of human TREX1 in complex with an inhibitor
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-03-01
Authors: Dehghani-Tafti, S., Dong, A., Li, Y., Xu, J., Ackloo, S., Arrowsmith, C.H., Edwards, A.M., Halabelian, L., Structural Genomics Consortium (SGC)
PDB entry 9avb: Fis1 Wild type
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-03-01
Authors: Mathews, I.I., Pokhrel, S., Wakatsuki, S.
PDB entry 9avc: Fis1 Structure Y38E mutation
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-03-01
Authors: Mathews, I.I., Pokhrel, S., Wakatsuki, S.
PDB entry 9avd: Mitochondrial fission 1 protein Fis1 structure T34D mutation
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2024-03-01
Authors: Mathews, I.I., Pokhrel, S., Wakatsuki, S.
PDB entry 9ave: Mitochondrial fission 1 protein Fis1 T34E mutation
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2024-03-01
Authors: Mathews, I.I., Pokhrel, S., Wakatsuki, S.
PDB entry 9avf: CCHFV GP38-GnH-DS heterodimer
Classification: VIRAL PROTEIN
Source organism: Crimean-Congo hemorrhagic fever virus strain IbAr10200
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-03-01
Authors: McFadden, E., Ramamohan, A.R., McLellan, J.S.
PDB entry 9avg: Structure of human calcium-sensing receptor in complex with chimeric Gs (miniGis) protein in nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-03-02
Authors: Zuo, H., Park, J., Frangaj, A., Ye, J., Lu, G., Manning, J.J., Asher, W.B., Lu, Z., Hu, G., Wang, L., Mendez, J., Eng, E., Zhang, Z., Lin, X., Grasucci, R., Hendrickson, W.A., Clarke, O.B., Javitch, J.A., Conigrave, A.D., Fan, Q.R.
PDB entry 9avh: Crystal structure of an aryl-alcohol-oxidase from Bjerkandera adusta.
Classification: OXIDOREDUCTASE
Source organism: Bjerkandera adusta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-03-03
Authors: Martinez-Julvez, M., Ferreira, P.
PDB entry 9avi: TolQ inner membrane protein from Acinetobacter baumannii
Classification: MEMBRANE PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-03-03
Authors: Quade, B., Otwinowski, Z., Borek, D., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 9avj: PS3 F1 ATPase Wild type
Classification: MEMBRANE PROTEIN
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2024-03-03
Authors: Sobti, M., Stewart, A.G.
PDB entry 9avk: Structure of long Rib domain from Limosilactobacillus reuteri
Classification: STRUCTURAL PROTEIN
Source organism: Limosilactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2024-03-04
Authors: Xue, Y., Kang, X.
PDB entry 9avl: Structure of human calcium-sensing receptor in complex with Gi3 protein in nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-03-04
Authors: Zuo, H., Park, J., Frangaj, A., Ye, J., Lu, G., Manning, J.J., Asher, W.B., Lu, Z., Hu, G., Wang, L., Mendez, J., Eng, E., Zhang, Z., Lin, X., Grasucci, R., Hendrickson, W.A., Clarke, O.B., Javitch, J.A., Conigrave, A.D., Fan, Q.R.
PDB entry 9avm: Crystal Structure of CARD9 coiled-coil K156-K214
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2024-03-04
Authors: Raymond, D.D., Lemke, C.T.
PDB entry 9avn: Crystal Structure of CARD9 coiled-coil K156-K214 bound to Compound 1
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.726 Å
Deposited: 2024-03-04
Authors: Raymond, D.D., Lemke, C.T.
PDB entry 9avo: The crystal structure of an engineered Protein GD with Human Kappa Fab
Classification: IMMUNE SYSTEM/Chaperone
Source organism: Homo sapiens; Streptococcus sp. 'group G'
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-03-04
Authors: Slezak, T., Kossiakoff, A.A.
PDB entry 9avq: Crystal structure of SARS-CoV-2 main protease A191T mutant in complex with an inhibitor Nirmatrelvir
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2024-03-04
Authors: Bulut, H., Hattori, S., Hayashi, H., Hasegawa, K., Li, M., Wlodawer, A., Tamamura, H., Mitsuya, H.
PDB entry 9avr: Human eIF4A-1 in complex with AMP-PNP, RNA, and the inhibitor silvestrol
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2024-03-04
Authors: Bhatt, G.B., Naineni, S.K., Cencic, R.C., Jiramongkolsiri, E.J., Huang, S.H., Pelletier, J.P., Nagar, B.N.
PDB entry 9avs: Human alpha-galactosidase A in complex with saposin B
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.53 Å
Deposited: 2024-03-04
Authors: Sawyer, T.K., Garman, S.C.
PDB entry 9avt: Structure of TAB2 NZF domain bound to K6 / Lys6-linked diubiquitin
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-03-04
Authors: Michel, M.A., Scutts, S., Komander, D.
PDB entry 9avu: Bovine fetal muscle nAChR bound to ACh
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-03-05
Authors: Li, H., Hibbs, R.E.
PDB entry 9avv: Bovine adult muscle nAChR resting state
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.09 Å
Deposited: 2024-03-05
Authors: Li, H., Hibbs, R.E.
PDB entry 9avw: Structure of TAB2 NZF domain bound to K6 / Lys6-linked diubiquitin
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.747 Å
Deposited: 2024-03-05
Authors: Michel, M.A., Scutts, S., Komander, D.
PDB entry 9avx: Crystal structure of trypsin at 100 Kelvin with benzamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.497 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9avy: Crystal structure of trypsin at 100 Kelvin with benzamidine (Duplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.497 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9avz: Crystal structure of trypsin at 100 Kelvin with benzamidine (triplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.499 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9aw0: Crystal structure of trypsin at 100 Kelvin with benzamidine (quadruplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.498 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9aw1: Crystal structure of trypsin at 125 Kelvin with benzamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9aw2: Crystal structure of trypsin at 125 Kelvin with benzamidine (duplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.498 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9aw3: Yeast 20S proteasome soaked with MA9 crude extract
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2024-03-05
Authors: Meneghello, R., Rustiguel, J.K., Fernandes, A.Z.N., Trivella, D.B.B.
PDB entry 9aw4: Crystal structure of trypsin at 125 Kelvin with benzamidine (triplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.499 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9aw5: Yeast 20S proteasome soaked with MA9 fraction E/F
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.44 Å
Deposited: 2024-03-05
Authors: Meneghello, R., Rustiguel, J.K., Fernandes, A.Z.N., Trivella, D.B.B.
PDB entry 9aw6: Yeast 20S proteasome soaked with MA9 fraction EF2
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.44 Å
Deposited: 2024-03-05
Authors: Meneghello, R., Rustiguel, J.K., Fernandes, A.Z.N., Trivella, D.B.B.
PDB entry 9aw7: Yeast 20S proteasome soaked with isolated TMC-95B
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2024-03-05
Authors: Meneghello, R., Rustiguel, J.K., Fernandes, A.Z.N., Trivella, D.B.B.
PDB entry 9aw8: Crystal structure of trypsin at 150 Kelvin with benzamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.496 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9aw9: Crystal structure of trypsin at 150 Kelvin with benzamidine (duplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.495 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awa: Crystal structure of trypsin at 150 Kelvin with benzamidine (triplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.497 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awb: Crystal structure of trypsin at 175 Kelvin with benzamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.495 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awc: Crystal structure of trypsin at 175 Kelvin with benzamidine (duplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.487 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awd: Crystal structure of trypsin at 175 Kelvin with benzamidine (triplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.491 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awe: The crystal structure of an engineered Protein GF with Human Kappa Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Streptococcus sp. 'group G'
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-03-05
Authors: Slezak, T., Kossiakoff, A.A.
PDB entry 9awf: Crystal structure of trypsin at 200 Kelvin with benzamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.498 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awg: Crystal structure of trypsin at 200 Kelvin with benzamidine (duplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.493 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awh: Crystal structure of trypsin at 200 Kelvin with benzamidine (triplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.497 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awi: Crystal structure of trypsin at 225 Kelvin with benzamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.479 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awj: Bovine adult muscle nAChR bound to ACh
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.45 Å
Deposited: 2024-03-05
Authors: Li, H., Hibbs, R.E.
PDB entry 9awk: Bovine fetal muscle nAChR resting state
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.14 Å
Deposited: 2024-03-05
Authors: Li, H., Hibbs, R.E.
PDB entry 9awl: Crystal structure of trypsin at 225 Kelvin with benzamidine (duplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awm: Crystal structure of trypsin at 225 Kelvin with benzamidine (Triplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.499 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awn: Crystal structure of trypsin at 250 Kelvin with benzamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.484 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awo: Crystal structure of trypsin at 250 Kelvin with benzamidine (duplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.497 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awp: Crystal structure of trypsin at 250 Kelvin with benzamidine (triplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.497 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awq: Crystal structure of trypsin at 275 Kelvin with benzamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.491 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awr: Crystal structure of trypsin at 275 Kelvin with benzamidine (duplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.491 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9aws: Crystal structure of trypsin at 275 Kelvin with benzamidine (triplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.497 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awt: Structure of the A type blood alpha-D-galactosamine galactosaminidase from Flavonifractor plautii in complex with GalN-pNP
Classification: SUGAR BINDING PROTEIN
Source organism: Flavonifractor plautii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-03-05
Authors: Worrall, L.J., Strynadka, N.C.J.
PDB entry 9awu: Crystal structure of trypsin at 300 Kelvin with benzamidine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.482 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awv: Crystal structure of trypsin at 300 Kelvin with benzamidine (duplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.484 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9awx: Structure of full-length amyloidogenic immunoglobulin light chain H9 in complex with 1-(1-(imidazo[1,5-a]pyrazin-8-yl)azetidin-3-yl)-3-(2-(6-methyl-4-(3-methyl-3-phenylpyrrolidin-1-yl)-2-oxopyridin-1(2H)-yl)ethyl)urea
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-03-05
Authors: Lederberg, O.L., Yan, N.L., Stanfield, R.L., Wilson, I.A., Kelly, J.W.
PDB entry 9awy: Structure of full-length amyloidogenic immunoglobulin light chain H9 in complex with 3-(2-(4-(3-ethyl-3-phenylpyrrolidin-1-yl)-6-methyl-2-oxopyridin-1(2H)-yl)ethyl)-8-(imidazo[1,5-a]pyrazin-8-yl)-1,3,8-triazaspiro[4.5]decan-2-one
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-03-05
Authors: Lederberg, O.L., Kelly, J.W., Yan, N.L., Wilson, I.A., Stanfield, R.L.
PDB entry 9awz: Crystal structure of trypsin at 300 Kelvin with benzamidine (triplicate)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.488 Å
Deposited: 2024-03-05
Authors: Lima, L.M.T.R., de Sa Ribeiro, F.
PDB entry 9ax1: Structure of full-length amyloidogenic immunoglobulin light chain H9 in complex with 2-(6-methyl-2-oxo-4-(2-phenylpropoxy)pyridin-1(2H)-yl)ethyl (3-(1H-imidazol-4-yl)benzyl)carbamate
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-03-05
Authors: Lederberg, O.L., Yan, N.L., Stanfield, R.L., Wilson, I.A., Kelly, J.W.
PDB entry 9ax2: Structure of full-length amyloidogenic immunoglobulin light chain H9 in complex with 2-(1-methyl-3-oxo-5-(2-phenylpropoxy)isoindolin-2-yl)ethyl (3-(1H-imidazol-4-yl)benzyl)carbamate
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-03-05
Authors: Lederberg, O.L., Yan, N.L., Stanfield, R.L., Wilson, I.A., Kelly, J.W.
PDB entry 9ax3: Structure of full-length amyloidogenic immunoglobulin light chain H9 in complex with 4-(3-ethyl-3-phenylpyrrolidin-1-yl)-1,6-dimethylpyridin-2(1H)-one
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-03-05
Authors: Lederberg, O.L., Yan, N.L., Stanfield, R.L., Wilson, I.A., Kelly, J.W.
PDB entry 9ax5: Cryo-EM structure of Phospholipase C epsilon PH-C terminus in complex with RhoA-GTP
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-03-05
Authors: Ohri, V., Lyon, A.M.
PDB entry 9ax6: Tricomplex of RMC-6236, KRAS G12D, and CypA
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-03-05
Authors: Tomlinson, A.C.A., Saldajeno-Concar, M., Knox, J.E., Yano, J.K.
PDB entry 9ax7: 70S initiation complex (tRNA-fMet M1 + CUG start codon)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2024-03-06
Authors: Mattingly, J.M., Nguyen, H.A., Dunham, C.M.
PDB entry 9ax8: 70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-03-06
Authors: Mattingly, J.M., Nguyen, H.A., Dunham, C.M.
PDB entry 9ax9: Crystal Structure of Enterovirus 68 3C Protease C147A Mutant with 3B3C peptide at 2.00 Angstroms
Classification: VIRAL PROTEIN,HYDROLASE
Source organism: Human enterovirus D68
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-03-06
Authors: Azzolino, V.N., Shaqra, A.M., Schiffer, C.A.
PDB entry 9axa: CryoEM structure of activated CRAF/MEK/14-3-3 complex with NST-628
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.36 Å
Deposited: 2024-03-06
Authors: Quade, B., Cohen, S.E., Huang, X.
PDB entry 9axb: Structure of Gp54 from Escherichia phage Bas11
Classification: VIRAL PROTEIN
Source organism: Escherichia phage JohannLBurckhardt
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-03-06
Authors: Zhang, T., Lim, D.C., Laub, M.T.
PDB entry 9axc: Activated CRAF/MEK heterotetramer from focused refinement of CRAF/MEK/14-3-3 complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.16 Å
Deposited: 2024-03-06
Authors: Quade, B., Cohen, S.E., Huang, X.
PDB entry 9axd: HIV BG505.v5.2 (N289/N241) SOSIP Env in Complex with gp120-Interface pAb from Rh.33203
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-03-06
Authors: Brown, S., Antansijevic, A., Ward, A.B.
PDB entry 9axe: Cryo-EM reconstruction of a Staphylococcus aureus oleate hydratase (OhyA) assembly of dimers bound to a liposome
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-03-06
Authors: Oldham, M.L., Qayyum, M.Z., Radka, C.D.
PDB entry 9axf: Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in detergent
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-03-06
Authors: Zuo, H., Park, J., Frangaj, A., Ye, J., Lu, G., Manning, J.J., Asher, W.B., Lu, Z., Hu, G., Wang, L., Mendez, J., Eng, E., Zhang, Z., Lin, X., Grasucci, R., Hendrickson, W.A., Clarke, O.B., Javitch, J.A., Conigrave, A.D., Fan, Q.R.
PDB entry 9axg: Human saposin B in the presence of globotriaosylceramide-NBD
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2024-03-06
Authors: Sawyer, T.K., Garman, S.C.
PDB entry 9axh: Crystal structure of KSR1/MEK1 complex heterotetramer with NST-628
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2024-03-06
Authors: Quade, B., Huang, X.