LiteFold/PDB huggingface dataset:
PDB entry 8ty6: Disulfide-stabilized HIV-1 CA hexamer in complex with PQBP1 Nt
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-08-24
Authors: Piacentini, J., Pornillos, O., Ganser-Pornillos, B.K.
PDB entry 8ty7: Crystal structure of 05.GC.w2.3C10 Fab in complex with H1 HA from A/California/04/2009(H1N1)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (strain swl A/California/04/2009 H1N1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2023-08-24
Authors: Lin, T.H., Moore, N., Wilson, I.A.
PDB entry 8ty8: KRAS 1-169 G12C Mutant at 310k
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-08-24
Authors: Deck, S.L., Xu, M., Milano, S.K., Aplin, C.
PDB entry 8ty9: KRAS 1-169 G12C Mutant at 313k
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2023-08-24
Authors: Deck, S.L., Xu, M., Milano, S.K., Aplin, C.
PDB entry 8tyc: Lassa GPC (strain Josiah) bound to rabbit polyclonal base-targeting antibody Base-1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Lassa virus; Oryctolagus cuniculus; Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-08-24
Authors: Perrett, H.R., Brouwer, P.J.M., Ward, A.B.
PDB entry 8tye: Lassa GPC (strain Josiah) bound to rabbit polyclonal fusion-peptide-targeting antibody FP-1
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Lassa virus (strain Mouse/Sierra Leone/Josiah/1976); Oryctolagus cuniculus; Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-08-25
Authors: Perrett, H.R., Brouwer, P.J.M., Ward, A.B.
PDB entry 8tyf: Plasmodium vivax PMV-WM06 inhibitor complex
Classification: HYDROLASE/Inhibitor
Source organism: Plasmodium vivax Sal-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2023-08-25
Authors: Hodder, A.N., Scally, S.W., Czabotar, P.E., Cowman, A.F.
PDB entry 8tyg: Plasmodium vivax PMV-WM08 inhibitor complex
Classification: HYDROLASE
Source organism: Plasmodium vivax Sal-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2023-08-25
Authors: Hodder, A.N., Scally, S.W., Cowman, A.F.
PDB entry 8tyh: Plasmodium vivax PMX
Classification: HYDROLASE/Inhibitor
Source organism: Plasmodium vivax Sal-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-08-25
Authors: Hodder, A.N., Scally, S.W., Cowman, A.F.
PDB entry 8tyi: NMR structure of L5pG ([p23W, G24W]kalata B1)
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2023-08-25
Authors: Tian, S., Craik, D.J., Conan, K.W.
PDB entry 8tyj: Crystal structure of SARS-CoV-2 nsp10/nsp16 complex with bound SAH
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-08-25
Authors: Patel, K.P., Bruner, S.D.
PDB entry 8tyk: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) T21I Mutant
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-08-25
Authors: Kohaal, N., Lewandowski, E.M., Wang, J., Chen, Y.
PDB entry 8tyl: Structural and biochemical rationale for Beta variant protein booster vaccine broad cross-neutralization of SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2023-08-25
Authors: Bruch, E.M., Rak, A.
PDB entry 8tym: Cryo-EM of the GDP-bound human dynamin (full-length) polymer assembled on the membrane in the super constricted state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2023-08-25
Authors: Jimah, J.R., Canagarajah, B.J., Hinshaw, J.E.
PDB entry 8tyn: Cryo-EM of the GDP-bound human dynamin polymer assembled on the membrane in the super constricted state (tetramer model)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2023-08-25
Authors: Jimah, J.R., Canagarajah, B.J., Hinshaw, J.E.
PDB entry 8tyo: Structural and biochemical rationale for Beta variant protein booster vaccine broad cross-neutralization of SARS-CoV-2
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2023-08-25
Authors: Bruch, E.M., Rak, A.
PDB entry 8typ: Complement Protease C1s Inhibited by 6-(4-phenylpiperazin-1-yl)pyridine-3-carboximidamide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-08-25
Authors: Geisbrecht, B.V.
PDB entry 8tyq: Structure of the C-terminal half of LRRK2 bound to GZD-824 (G2019S mutant)
Classification: PROTEIN BINDING
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-08-25
Authors: Villagran-Suarez, A., Sanz-Murillo, M., Alegrio-Louro, J., Leschziner, A.
PDB entry 8tys: Adaptive mechanism of collagen IV scaffold assembly in Drosophila: crystal structure of tissue-extracted NC1 hexamer
Classification: STRUCTURAL PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-08-25
Authors: Boudko, S.P.
PDB entry 8tyu: High-resolution crystal structure of the SPX domain of XPR1 at 1.4 angstroms
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-08-25
Authors: Wang, H., Shears, S.B.
PDB entry 8tyv: Crystal structure of the SPX domain of XPR1 in complex with IP8
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-08-25
Authors: Wang, H., Shears, S.B.
PDB entry 8tyw: cryo-EM structure of GPR6-Gs-Nb35 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2023-08-26
Authors: Barekatain, M., Johansson, L.C., Lam, J.H., Sadybekov, A.V., Han, G.W., Popov, P., Russo, J., Bliesath, J., Brice, N., Beresford, M., Carlson, L., Saikatendu, K.S., Sun, H., Murphy, S., Monenschein, H., Schiffer, H.H., Lutomski, C., Robinson, C.V., Liu, J., Hua, T., Katritch, V., Cherezov, V.
PDB entry 8tyx: Structure of a bacterial Ubl-deubiquitinase complex (form 1)
Classification: ANTIVIRAL PROTEIN
Source organism: Ensifer aridi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2023-08-26
Authors: Ye, Q., Gong, M., Corbett, K.D.
PDB entry 8tyy: Structure of a bacterial Ubl-deubiquitinase complex (form 2)
Classification: ANTIVIRAL PROTEIN
Source organism: Ensifer aridi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2023-08-26
Authors: Ye, Q., Gong, M., Corbett, K.D.
PDB entry 8tyz: Structure of a bacterial E1-E2-Ubl complex (form 2)
Classification: ANTIVIRAL PROTEIN
Source organism: Ensifer aridi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2023-08-26
Authors: Ye, Q., Chambers, L.R., Corbett, K.D.
PDB entry 8tz0: Structure of a bacterial E1-E2-Ubl complex (form 1)
Classification: ANTIVIRAL PROTEIN
Source organism: Ensifer aridi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2023-08-26
Authors: Ye, Q., Chambers, L.R., Corbett, K.D.
PDB entry 8tz1: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Ribavirin
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.54 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tz2: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in MSP2N2 nanodiscs, apo state
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tz3: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with GS-441524, consensus reconstruction
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tz4: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with GS-441524, subset reconstruction
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tz5: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with N-hydroxycytidine
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tz6: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with PSI-6206
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tz7: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, INT1-INT1-INT1 conformation
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tz8: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, INT1-INT1-INT3 conformation
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tz9: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 2, INT2-INT2-INT2 conformation
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.67 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tza: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 2, INT2-INT1-INT1 conformation
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tzb: Structure of the C-terminal half of LRRK2 bound to GZD-824 (I2020T mutant)
Classification: PROTEIN BINDING
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-08-26
Authors: Villagran-Suarez, A., Sanz-Murillo, M., Alegrio-Louro, J., Leschziner, A.
PDB entry 8tzc: Structure of C-terminal LRRK2 bound to MLi-2 (G2019S mutant)
Classification: PROTEIN BINDING
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-08-26
Authors: Sanz-Murillo, M., Villagran-Suarez, A., Alegrio-Louro, J., Leschziner, A.
PDB entry 8tzd: Cryo-EM structure of bovine concentrative nucleoside transporter 3 in complex with Molnupiravir, condition 1, INT1-INT1-OFS conformation (3DVA analysis)
Classification: TRANSPORT PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.-Y.
PDB entry 8tze: Structure of C-terminal half of LRRK2 bound to GZD-824
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-08-26
Authors: Villagran-Suarez, A., Sanz-Murillo, M., Alegrio-Louro, J., Leschziner, A.
PDB entry 8tzf: Structure of full length LRRK2 bound to GZD-824 (I2020T mutant)
Classification: PROTEIN BINDING
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-08-26
Authors: Villagran-Suarez, A., Sanz-Murillo, M., Alegrio-Louro, J., Leschziner, A.
PDB entry 8tzg: Structure of C-terminal LRRK2 bound to MLi-2 (I2020T mutant)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-08-26
Authors: Sanz-Murillo, M., Villagran-Suarez, A., Alegrio Louro, J., Leschziner, A.
PDB entry 8tzh: Structure of full-length LRRK2 bound to MLi-2 (I2020T mutant)
Classification: PROTEIN BINDING
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-08-26
Authors: Sanz-Murillo, M., Villagran-Suarez, A., Alegrio Louro, J., Leschziner, A.
PDB entry 8tzi: Human equilibrative nucleoside transporter-1, JH-ENT-01 bound
Classification: TRANSPORT PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-08-26
Authors: Wright, N.J., Lee, S.Y.
PDB entry 8tzj: Cryo-EM structure of Vibrio cholerae FtsE/FtsX complex
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2023-08-27
Authors: Hao, A., Lee, S.-Y.
PDB entry 8tzk: Cryo-EM structure of Vibrio cholerae FtsE/FtsX/EnvC complex, shortened
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2023-08-27
Authors: Hao, A., Lee, S.-Y.
PDB entry 8tzl: Cryo-EM structure of Vibrio cholerae FtsE/FtsX/EnvC complex, full-length
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2023-08-27
Authors: Hao, A., Lee, S.-Y.
PDB entry 8tzm: Solution structure for a putative Type I site-specific deoxyribonuclease from Neisseria gonorrhoeae (NCCP11945). Seattle Structural Genomics Center for Infectious Disease target NegoA.19201.a
Classification: STRUCTURAL GENOMICS
Source organism: Neisseria gonorrhoeae
Experimental method: SOLUTION NMR
Deposited: 2023-08-27
Authors: Buchko, G.W., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8tzn: Crystal structure of 10E8-GT10.2 HIV-1 MPER scaffold in complex with a non-human primate W3-01 Fab
Classification: IMMUNE SYSTEM
Source organism: unidentified monkey
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2023-08-27
Authors: Lee, C.C.D., Wilson, I.A.
PDB entry 8tzo: Structure of human Wnt7a bound to WLS and CALR
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-08-27
Authors: Qi, X., Hu, Q., Li, X.
PDB entry 8tzp: Structure of human Wnt7a bound to WLS and RECK
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2023-08-27
Authors: Qi, X., Hu, Q., Li, X.
PDB entry 8tzq: CryoEM structure of D2 dopamine receptor in complex with GoA KE Mutant, scFv16, and dopamine
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-08-27
Authors: Krumm, B.E., Kapolka, N.J., Fay, J.F., Roth, B.L.
PDB entry 8tzr: Structure of human Wnt3a bound to WLS and CALR
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-08-27
Authors: Qi, X., Hu, Q., Li, X.
PDB entry 8tzs: Structure of human WLS
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2023-08-27
Authors: Qi, X., Hu, Q., Li, X.
PDB entry 8tzu: OC43 S1b domain in complex with WNb 293 and WNb 317
Classification: VIRAL PROTEIN
Source organism: Human coronavirus OC43; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-08-27
Authors: Pymm, P., Feng, J., Tham, W.H.
PDB entry 8tzv: Apo form of human ATE1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-08-28
Authors: Huang, W., Zhang, Y., Taylor, D.J.
PDB entry 8tzw: Crystal structure of 10E8-GT4 scaffold in complex with a human 10E8 inferred germline (10E8-iGL1)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2023-08-28
Authors: Irimia, A., Wilson, I.A.
PDB entry 8tzx: Ternary complex structure of Cereblon-DDB1 bound to WIZ(ZF7) and the molecular glue dWIZ-1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2023-08-28
Authors: Clifton, M.C., Ma, X., Ornelas, E.
PDB entry 8tzy: CryoEM structure of non-neutralizing bivalent antibody CBH-4B in complex with Hepatitis C virus envelope glycoprotein E2
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Hepatitis C virus (isolate 1); Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-08-28
Authors: Shahid, S., Liqun, J., Liu, Y., Hasan, S.S., Mariuzza, R.A.
PDB entry 8tzz: SpG Cas9 with NGC PAM DNA target
Classification: IMMUNE SYSTEM/RNA/DNA
Source organism: Streptococcus pyogenes; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2023-08-28
Authors: Bravo, J.P.K., Hibshman, G.N., Taylor, D.W.
PDB entry 8u00: Crystal structure of metallo-beta-lactamase superfamily protein from Caulobacter vibrioides
Classification: HYDROLASE
Source organism: Caulobacter vibrioides CB15
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-08-28
Authors: Kim, Y., Maltseva, N., Endres, M., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8u01: Crystal Structure of the Glycoside Hydrolase Family 2 TIM Barrel-domain Containing Protein from Phocaeicola plebeius
Classification: HYDROLASE
Source organism: Phocaeicola plebeius
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-08-28
Authors: Kim, Y., Joachimiak, G., Endres, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 8u02: CryoEM structure of D2 dopamine receptor in complex with GoA KE mutant and dopamine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2023-08-28
Authors: Krumm, B.E., Kapolka, N.J., Fay, J.F., Roth, B.L.
PDB entry 8u03: Crystal structure of non-glycosylated 10E8-GT10.1 scaffold in complex with a human 10E8 NGS precursor (10E8-NGS-03)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2023-08-28
Authors: Irimia, A., Wilson, I.A.
PDB entry 8u04: Reductasporine biosynthetic pathway imine reductase RedE, apo
Classification: BIOSYNTHETIC PROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2023-08-28
Authors: Daniel-Ivad, P., Ryan, K.S.
PDB entry 8u05: Reductasporine biosynthetic pathway imine reductase RedE bound with NADP+
Classification: BIOSYNTHETIC PROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2023-08-28
Authors: Daniel-Ivad, P., Ryan, K.S.
PDB entry 8u06: Imine reductase RedE bound with NADP+ and arcyriaflavin A (primary site)
Classification: BIOSYNTHETIC PROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-08-28
Authors: Daniel-Ivad, P., Ryan, K.S.
PDB entry 8u07: Imine reductase RedE bound with NADP+ and arcyriaflavin A (secondary site)
Classification: BIOSYNTHETIC PROTEIN
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-08-28
Authors: Daniel-Ivad, P., Ryan, K.S.
PDB entry 8u08: Crystal structure of 10E8-GT11 scaffold in complex with a human 10E8 inferred germline (10E8-iGL1)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-08-28
Authors: Irimia, A., Wilson, I.A.
PDB entry 8u09: Crystal structure of substrate-free SyoA
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis thermoflava N1165
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-08-28
Authors: Harlington, A.C., Shearwin, K.E., Bell, S.G., Whelan, F.
PDB entry 8u0a: Crystal structure of Lyssavirus rabies (Ni-CE strain) nucleoprotein in complex with phosphoprotein chaperone
Classification: VIRAL PROTEIN
Source organism: Rabies virus (strain Nishigahara RCEH)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-08-28
Authors: Donnelly, C.M., Stewart, M., Forwood, J.K.
PDB entry 8u0b: Crystal structure of Lyssavirus rabies (Nishigahara strain) nucleoprotein in complex with phosphomimetic phosphoprotein S48E
Classification: VIRAL PROTEIN
Source organism: Lyssavirus rabies
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-08-28
Authors: Donnelly, C.M., Stewart, M., Forwood, J.K.
PDB entry 8u0f: Bacterial fluorescent protein
Classification: LUMINESCENT PROTEIN
Source organism: Ceramium secundatum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2023-08-29
Authors: Gully, B.S., Rossjohn, J.
PDB entry 8u0g: Full-length dimer of DNA-Damage Response Protein C from Deinococcus radiodurans - Crystal form xMJ7124
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
Experimental method: X-RAY DIFFRACTION
Resolution: 4.28 Å
Deposited: 2023-08-29
Authors: Szabla, R., Li, M.C., Junop, M.S.
PDB entry 8u0h: Crystal structure of PTPN2 with a PROTAC
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-08-29
Authors: Jain, R., Longenecker, K., Qiu, W.
PDB entry 8u0i: Crystal structure of PA0012 complexed with cyclic-di-GMP from Pseudomonas aeruginosa
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas aeruginosa PA14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.541 Å
Deposited: 2023-08-29
Authors: Hammons, N.A., Schnicker, N.J., Fuentes, E.J.
PDB entry 8u0j: DdmE in complex with guide and target DNA
Classification: IMMUNE SYSTEM/DNA
Source organism: Vibrio cholerae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-08-29
Authors: Bravo, J.P.K.
PDB entry 8u0k: Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to DMAP and ADP
Classification: TRANSFERASE
Source organism: Thermococcus paralvinellae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-08-29
Authors: Singh, S., Thomas, L.M., Johnson, B.P., Brown, S.
PDB entry 8u0l: Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to (E)-But-2-en-1-yl monophosphate and ADP
Classification: TRANSFERASE
Source organism: Thermococcus paralvinellae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-08-29
Authors: Singh, S., Thomas, L.M., Johnson, B.P., Brown, S.
PDB entry 8u0m: Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to (E)-2-methylbut-2-en-1-yl monophosphate and ATP
Classification: TRANSFERASE
Source organism: Thermococcus paralvinellae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2023-08-29
Authors: Singh, S., Thomas, L.M., Johnson, B.P., Brown, S.
PDB entry 8u0n: Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to 2-cyclopentylideneethyl monophosphate and ADP
Classification: TRANSFERASE
Source organism: Thermococcus paralvinellae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-08-29
Authors: Singh, S., Thomas, L.M., Johnson, B.P., Brown, S.
PDB entry 8u0o: Synaptic complex of human DNA polymerase Lambda DL variant engaged on a DNA double-strand break containing an unpaired 3' primer terminus
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-08-29
Authors: Kaminski, A.M., Pedersen, L.C., Bebenek, K., Kunkel, T.A., Chiruvella, K.K., Ramsden, D.A.
PDB entry 8u0p: Synaptic complex of human DNA polymerase Lambda DL variant engaged on a noncomplementary DNA double-strand break
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-08-29
Authors: Kaminski, A.M., Pedersen, L.C., Bebenek, K., Kunkel, T.A., Chiruvella, K.K., Ramsden, D.A.
PDB entry 8u0q: Co-crystal structure of optimized analog TDI-13537 provided new insights into the potency determinants of the sulfonamide inhibitor series
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-08-29
Authors: Dementiev, A.A., Michino, M., Vendome, J., Ginn, J., Bryk, R., Olland, A.
PDB entry 8u0r: The crystal structure of protein A21, a component of the conserved poxvirus entry-fusion complex
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-08-29
Authors: Diesterbeck, U., Gittis, A.G., Garboczi, D.N., Moss, B.
PDB entry 8u0t: PRD-0038 RBD bound to Rhinolophus alcyone ACE2 (local refinement)
Classification: VIRAL PROTEIN
Source organism: Rhinolophus alcyone; Sarbecovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-08-29
Authors: Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u0u: DdmD dimer in complex with ssDNA
Classification: IMMUNE SYSTEM/DNA
Source organism: Vibrio cholerae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2023-08-29
Authors: Bravo, J.P.K.
PDB entry 8u0v: S. cerevisiae Pex1/Pex6 with 1 mM ATP
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2023-08-29
Authors: Gardner, B.M.
PDB entry 8u0w: DdmD monomer in complex with ssDNA
Classification: IMMUNE SYSTEM/DNA
Source organism: Vibrio cholerae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2023-08-29
Authors: Bravo, J.P.K.
PDB entry 8u0x: Yeast Pex6 N1(1-184) Domain
Classification: MOTOR PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2023-08-29
Authors: Gardner, B.M., Ali, B.A.
PDB entry 8u0y: Bacterial protein cpx
Classification: LUMINESCENT PROTEIN
Source organism: Ceramium secundatum; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-08-29
Authors: Gully, B.S., Rossjohn, J.
PDB entry 8u0z: CRYSTAL STRUCTURE OF THE OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE DOMAIN OF Coffea arabica UMP SYNTHASE
Classification: LYASE
Source organism: Coffea arabica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.399 Å
Deposited: 2023-08-29
Authors: Hinojosa-Cruz, A., Diaz-Vilchis, A., Gonzalez-Segura, L.
PDB entry 8u10: In situ cryo-EM structure of bacteriophage P22 gp1:gp4:gp5:gp10:gp9 N-term complex in conformation 1 at 3.2A resolution
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-08-30
Authors: Iglesias, S., Feng-Hou, C., Cingolani, G.
PDB entry 8u11: In situ cryo-EM structure of bacteriophage P22 gp1:gp5:gp4: gp10: gp9 N-term complex in conformation 2 at 3.1A resolution
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-08-30
Authors: Iglesias, S., Feng-Hou, C., Cingolani, G.
PDB entry 8u12: Crystal Structure of Antitoxin Protein Rv0298 of Type II Toxin-antitoxin Systems from Mycobacterium tuberculosis
Classification: ANTITOXIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-08-30
Authors: Kim, Y., Tesar, C., Endres, M., Joachimiak, A., Center for Structural Biology of Infectious Diseases (CSBID)
PDB entry 8u13: Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A lysine 15 in complex with RNF168-UbcH5c (class 1)
Classification: STRUCTURAL PROTEIN/DNA/TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-08-30
Authors: Hu, Q., Botuyan, M.V., Zhao, D., Cui, G., Mer, G.
PDB entry 8u14: Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A lysine 15 in complex with RNF168-UbcH5c (class 2)
Classification: STRUCTURAL PROTEIN/DNA/TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-08-30
Authors: Hu, Q., Botuyan, M.V., Zhao, D., Cui, G., Mer, G.
PDB entry 8u15: The ternary complex structure of DDB1-CRBN-SALL4(ZF1,2)-short bound to CC-220
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2023-08-30
Authors: Clifton, M.C., Ma, X., Ornelas, E.
PDB entry 8u16: The ternary complex structure of DDB1-CRBN-SALL4(ZF1,2)-short bound to Pomalidomide
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-08-30
Authors: Clifton, M.C., Ma, X., Ornelas, E.
PDB entry 8u17: The ternary complex structure of DDB1-CRBN-SALL4(ZF1,2)-long bound to Pomalidomide
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2023-08-30
Authors: Clifton, M.C., Ma, X., Ornelas, E.
PDB entry 8u18: Cryo-EM structure of murine Thrombopoietin receptor ectodomain in complex with Tpo
Classification: CYTOKINE/RECEPTOR
Source organism: Mus musculus; Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-08-30
Authors: Sarson-Lawrence, K.S., Hardy, J.M., Leis, A., Babon, J.J., Kershaw, N.J.
PDB entry 8u19: Crystal structure of SyoA bound to syringol
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis thermoflava N1165
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2023-08-31
Authors: Harlington, A.C., Shearwin, K.E., Bell, S.G., Whelan, F.
PDB entry 8u1a: De novo Design of Near Infrared Fluorescent Proteins
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2023-08-31
Authors: Liu, Y., Xu, C., Bera, A.K., Kang, A., Baker, D.
PDB entry 8u1b: C-terminal LRRK2 bound to E11 DARPin
Classification: PROTEIN BINDING
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-08-31
Authors: Sanz-Murillo, M., Mathea, S., Dederer, V., Knapp, S., Leschziner, A.
PDB entry 8u1c: A mechanistic understanding of protective influenza B neuraminidase mAbs at the airway interface
Classification: HYDROLASE
Source organism: Homo sapiens; Influenza B virus (B/Iowa/06/2017)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2023-08-31
Authors: Ferguson, J.A., Oeverdieck, S., Ward, A.B.
PDB entry 8u1d: Cryo-EM structure of vaccine-elicited CD4 binding site antibody DH1285 bound to HIV-1 CH505TFchim.6R.SOSIP.664v4.1 Env Local Refinement
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.25 Å
Deposited: 2023-08-31
Authors: Thakur, B., Stalls, V.D., Acharya, P.
PDB entry 8u1e: Apo protein tyrosine phosphatase 1B (PTP1B) at high resolution (1.43 A) in space group P43212 with two distinctly ordered chains
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2023-08-31
Authors: Sharma, S., Mehlman, S.T., Keedy, D.A.
PDB entry 8u1f: FGFR2 Kinase Domain Bound to Irreversible Inhibitor Cmpd 10
Classification: Transferase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.33 Å
Deposited: 2023-08-31
Authors: Valverde, R., Foster, L.
PDB entry 8u1g: Prefusion-stabilized SARS-CoV-2 S2 subunit
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2023-08-31
Authors: Hsieh, C.-L., McLellan, J.S.
PDB entry 8u1h: Axle-less Bacillus sp. PS3 F1 ATPase mutant
Classification: HYDROLASE
Source organism: Bacillus sp. PS3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-09-01
Authors: Furlong, E.J., Zeng, Y.C., Brown, S.H.J., Sobti, M., Stewart, A.G.
PDB entry 8u1i: Crystal structure of SyoA bound to 4-methylsyringol
Classification: OXIDOREDUCTASE
Source organism: Amycolatopsis thermoflava N1165
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2023-09-01
Authors: Harlington, A.C., Shearwin, K.E., Bell, S.G., Whelan, F.
PDB entry 8u1j: N-Terminal domain of DNA-Damage Response Protein C (DdrC) from Deinococcus radiodurans - Crystal form xMJ7102
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-09-01
Authors: Szabla, R., Song, Y., Junop, M.S.
PDB entry 8u1k: Cryo-EM of Caulobacter crescentus Tad pilus
Classification: CELL ADHESION
Source organism: Caulobacter vibrioides
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-09-01
Authors: Sonani, R.R., Sanchez, J.C., Baumgardt, J.K., Wright, E.R., Egelman, E.H.
PDB entry 8u1l: Cryo-EM structure of the RAF1-HSP90-CDC37 complex in the closed state
Classification: SIGNALING PROTEIN/CHAPERONE
Source organism: Homo sapiens; Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-09-01
Authors: Finci, L.I., Simanshu, D.K.
PDB entry 8u1m: Cryo-EM structure of the HSP90 dimer (NTD-MD) in the semi-open state
Classification: CHAPERONE
Source organism: Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-09-01
Authors: Finci, L.I., Simanshu, D.K.
PDB entry 8u1n: Cryo-EM structure of the cross-linked HSP90 dimer (NTD-MD) in the semi-open state
Classification: CHAPERONE
Source organism: Trichoplusia ni
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-09-01
Authors: Finci, L.I., Simanshu, D.K.
PDB entry 8u1o: In situ cryo-EM structure of bacteriophage P22 tailspike protein complex at 3.4A resolution
Classification: VIRAL PROTEIN
Source organism: Salmonella phage P22
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-09-01
Authors: Iglesias, S.M., Feng-Hou, C., Cingolani, G.
PDB entry 8u1p: Local refinement of Plasmodium falciparum gametocyte surface protein Pfs48/45 Domains 1 and 2 in complex with neutralizing antibodies
Classification: CELL INVASION/Immune System
Source organism: Homo sapiens; Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-09-01
Authors: Kucharska, I., Hailemariam, S., Ivanochko, D., Rubinstein, J., Julien, J.P.
PDB entry 8u1q: A mechanistic understanding of protective influenza B neuraminidase mAbs at the airway interface
Classification: HYDROLASE
Source organism: Homo sapiens; Influenza B virus (B/Iowa/06/2017)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-09-01
Authors: Ferguson, J.A., Oeverdieck, S., Ward, A.B.
PDB entry 8u1r: Prefusion-stabilized Langya virus F protein, variant G99C/I109C
Classification: VIRUS
Source organism: Langya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-09-01
Authors: Byrne, P.O., McLellan, J.S.
PDB entry 8u1s: A mechanistic understanding of protective influenza B neuraminidase mAbs at the airway interface
Classification: HYDROLASE
Source organism: Homo sapiens; Influenza B virus (B/Iowa/06/2017)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.21 Å
Deposited: 2023-09-02
Authors: Ferguson, J.A., Raghavan, S.S.R., Ward, A.B.
PDB entry 8u1t: SARS-CoV-2 Envelope Protein Transmembrane Domain: Dimeric Structure Determined by Solid-State NMR
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: SOLID-STATE NMR
Deposited: 2023-09-02
Authors: Zhang, R., Qin, H., Prasad, R., Fu, R., Zhou, H.X., Cross, T.
PDB entry 8u1u: Structure of a class A GPCR/agonist complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Human adenovirus C serotype 2; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-09-02
Authors: Sun, D., Johnson, M., Masureel, M.
PDB entry 8u1v: Structure of Norovirus (Hu/GII.4/Sydney/NSW0514/2012/AU) protease in the ligand-free state
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2023-09-03
Authors: Eruera, A.R., Campbell, A.C., Krause, K.L.
PDB entry 8u1w: Structure of Norovirus (Hu/GII.4/Sydney/NSW0514/2012/AU) protease bound to inhibitor NV-004
Classification: VIRAL PROTEIN/INHIBITOR
Source organism: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2023-09-03
Authors: Eruera, A.R., Campbell, A.C., Krause, K.L.
PDB entry 8u1x: The structure of the PP2A-B56Delta holoenzyme mutant - E197K
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-09-04
Authors: Wu, C.G., Xing, Y.
PDB entry 8u1y: E.coli DsbA in complex with N-(4-(thiophen-3-yl)benzyl)cyclohexanamine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2023-09-04
Authors: Wang, G., Heras, B.
PDB entry 8u1z: Crystal structure of the Fis1 cytosolic domain bound to a peptide inhibitor
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-09-04
Authors: Nolden, K.A., Peterson, F.C., Hill, R.B.
PDB entry 8u20: A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 5
Classification: FLUORESCENT PROTEIN
Source organism: Corynactis californica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-09-05
Authors: Hung, L.-W., Terwilliger, T.C., Waldo, G., Nguyen, H.B.
PDB entry 8u21: A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP E6
Classification: FLUORESCENT PROTEIN
Source organism: Corynactis californica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-09-05
Authors: Hung, L.-W., Terwilliger, T.C., Waldo, G., Nguyen, H.B.
PDB entry 8u22: A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 7
Classification: FLUORESCENT PROTEIN
Source organism: Corynactis californica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-09-05
Authors: Hung, L.-W., Terwilliger, T.C., Waldo, G., Nguyen, H.B.
PDB entry 8u23: A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 8
Classification: FLUORESCENT PROTEIN
Source organism: Corynactis californica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2023-09-05
Authors: Hung, L.-W., Terwilliger, T.C., Waldo, G., Nguyen, H.B.
PDB entry 8u24: A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 9
Classification: FLUORESCENT PROTEIN
Source organism: Corynactis californica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-09-05
Authors: Hung, L.-W., Terwilliger, T.C., Waldo, G., Nguyen, H.B.
PDB entry 8u25: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) L50F/E166A/L167F Triple Mutant
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2023-09-05
Authors: Kohaal, N., Lewandowski, E.M., Wang, J., Chen, Y.
PDB entry 8u26: Gaussian Mixture Models based single particle refinement - GPCR (Substance P bound to active human neurokinin 1 receptor in complex with miniGs399 from EMPIAR-10786)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-09-05
Authors: Chen, M., Pintilie, G.
PDB entry 8u27: Bcl-2-xL complexed with compound 35
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-09-05
Authors: Rizo, J., Pan, Y.-Z.
PDB entry 8u28: Gaussian mixture model based single particle refinement - SARS (SARS-CoV-2 Spike Proteins on intact virions from EMPIAR-10492)
Classification: VIRUS
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-09-05
Authors: Chen, M., Pintilie, G.
PDB entry 8u29: Prefusion structure of the PRD-0038 spike glycoprotein ectodomain trimer
Classification: VIRAL PROTEIN
Source organism: Sarbecovirus sp.
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-09-05
Authors: Lee, J., Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2a: Crystal structure of NanI in complex with Neu5,9Ac
Classification: HYDROLASE
Source organism: Clostridium perfringens ATCC 13124
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-09-05
Authors: Medley, B.J., Boraston, A.B.
PDB entry 8u2b: Cryo-EM structure of C.crescentus bNY30a pilus complex
Classification: PROTEIN FIBRIL
Source organism: Caulobacter vibrioides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-09-05
Authors: Wang, Y., Zhang, J.
PDB entry 8u2c: Gaussian mixture model based single particle refinement - ABC transporter (inhibitor-bound ABCG2 from EMPIAR-10374)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-09-05
Authors: Chen, M., Pintilie, G.
PDB entry 8u2d: Bruton's tyrosine kinase in complex with N-[(2R)-1-[(3R)-3-(methylcarbamoyl)-1H,2H,3H,4H,9H-pyrido[3,4-b]indol-2-yl]-3-(3-methylphenyl)-1-oxopropan-2-yl]-1H-indazole-5-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-09-05
Authors: Gajewski, S., Clifton, M.C.
PDB entry 8u2e: Bruton's tyrosine kinase in complex with N-[(2R)-1-[(3R)-3-(methylcarbamoyl)-1H,2H,3H,4H,9H-pyrido[3,4-b]indol-2-yl]-3-(3-methylphenyl)-1-oxopropan-2-yl]-1H-indazole-5-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-09-05
Authors: Gajewski, S., Clifton, M.C.
PDB entry 8u2f: Vibrio parahaemolyticus ToxS periplasmic domain
Classification: MEMBRANE PROTEIN
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-09-06
Authors: Kim, M., Kull, F.J., Midgett, C.R.
PDB entry 8u2l: Crystal structure of KAI2 S95C L48I mutant
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2023-09-06
Authors: Davies, S.F., Waters, M.T., Bond, C.S.
PDB entry 8u2m: Structure of P450Blt from Micromonospora sp. MW-13 in Complex with Biarylitide
Classification: OXIDOREDUCTASE
Source organism: Micromonospora sp. MW-13; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2023-09-06
Authors: Hansen, M.H., Cryle, M.J.
PDB entry 8u2o: Crystal Structure of Cdk-related protein kinase 6 (PK6) from Plasmodium falciparum in complex with inhibitor TCMDC-123995
Classification: TRANSFERASE
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2p: Crystal Structure of Glycine--tRNA ligase from Mycobacterium tuberculosis (G5A bound)
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2q: Crystal Structure of Glycine--tRNA ligase active site chimera from Mycobacterium thermoresistibile/tuberculosis (G5A bound)
Classification: TRANSFERASE
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2r: Crystal Structure of Acetyl-coenzyme A synthetase from Leishmania infantum (Ethyl AMP bound)
Classification: LIGASE
Source organism: Leishmania infantum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2s: Crystal Structure of Acetyl-coenzyme A synthetase from Leishmania infantum (Ethyl AMP bound, P21 form)
Classification: LIGASE
Source organism: Leishmania infantum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2t: Crystal Structure of Acetyl-coenzyme A synthetase from Leishmania infantum (CoA and AMP bound)
Classification: LIGASE
Source organism: Leishmania infantum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2u: Crystal Structure of Acetyl-coenzyme A synthetase from Leishmania infantum (CoA, AMP and potassium bound)
Classification: LIGASE
Source organism: Leishmania infantum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2v: Crystal Structure of methylglyoxal synthase from Borrelia burgdorferi
Classification: LYASE
Source organism: Borreliella burgdorferi B31
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2w: Glucose-6-phosphate 1-dehydrogenase (G6PDH) from Crithidia fasciculata (NADP bound)
Classification: OXIDOREDUCTASE
Source organism: Crithidia fasciculata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8u2x: Crystal Structure of NendoU (Uridylate-specific endoribonuclease, nsp15) from Betacoronavirus SARS-CoV-2 (H235A mutant)
Classification: LIGASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-09-06
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)