LiteFold/PDB huggingface dataset:
PDB entry 3i46: Crystal structure of beta toxin from Staphylococcus aureus F277A, P278A mutant with bound calcium ions
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-01
Authors: Huseby, M., Shi, K., Kruse, A.C., Ohlendorf, D.H.
PDB entry 3i47: CRYSTAL STRUCTURE OF putative enoyl CoA hydratase/isomerase (crotonase) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Classification: LYASE
Source organism: Legionella pneumophila subsp. pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2009-07-01
Authors: Malashkevich, V.N., Toro, R., Morano, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i48: Crystal structure of beta toxin from Staphylococcus aureus F277A, P278A mutant with bound magnesium ions
Classification: TOXIN
Source organism: Staphylococcus aureus RN4220
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-01
Authors: Huseby, M., Shi, K., Kruse, A.C., Ohlendorf, D.H.
PDB entry 3i49: Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate and methylated trinucleotide T-meC-T
Classification: OXIDOREDUCTASE/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-07-01
Authors: Yu, B., Hunt, J.F.
PDB entry 3i4a: Crystal structure of dimethylarginine dimethylaminohydrolase-1 (DDAH-1) in complex with N5-(1-iminopropyl)-L-ornithine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.898 Å
Deposited: 2009-07-01
Authors: Monzingo, A.F., Wang, Y., Hu, S., Schaller, T.H., Fast, W., Robertus, J.D.
PDB entry 3i4b: Crystal structure of GSK3b in complex with a pyrimidylpyrrole inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-01
Authors: Ter Haar, E.
PDB entry 3i4c: Crystal structure of Sulfolobus Solfataricus ADH(SsADH) double mutant (W95L,N249Y)
Classification: OXIDOREDUCTASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-01
Authors: Esposito, L., Pennacchio, A., Zagari, A., Rossi, M., Raia, C.A.
PDB entry 3i4d: Photosynthetic reaction center from rhodobacter sphaeroides 2.4.1
Classification: MEMBRANE PROTEIN
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2009-07-01
Authors: Fujii, R., Adachi, S., Roszak, A.W., Gardiner, A.T., Cogdell, R.J., Isaacs, N.W., Koshihara, S., Hashimoto, H.
PDB entry 3i4e: Crystal structure of Isocitrate Lyase from Burkholderia pseudomallei
Classification: LYASE
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2009-07-01
Authors: Staker, B.L., Arakaki, T., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3i4f: Structure of putative 3-oxoacyl-reductase from bacillus thuringiensis
Classification: OXIDOREDUCTASE
Source organism: Bacillus thuringiensis serovar kurstaki
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2009-07-01
Authors: Ramagopal, U.A., Kim, J., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i4g: CRYSTAL STRUCTURE OF A SUSD-LIKE CARBOHYDRATE BINDING PROTEIN (BF0978) FROM BACTEROIDES FRAGILIS NCTC 9343 AT 1.35 A RESOLUTION
Classification: CARBOHYDRATE-BINDING PROTEIN
Source organism: Bacteroides fragilis NCTC 9343
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2009-07-01
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3i4h: Crystal structure of Cas6 in Pyrococcus furiosus
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-07-01
Authors: Carte, J., Wang, R., Li, H., Terns, R.M., Terns, M.P.
PDB entry 3i4i: Crystal structure of a prokaryotic beta-1,3-1,4-glucanase (lichenase) derived from a mouse hindgut metagenome
Classification: HYDROLASE
Source organism: uncultured murine large bowel bacterium BAC 14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2009-07-01
Authors: Nakatani, Y., Nalder, T.D., Tannock, G.W., Cutfield, J.F., Jack, R.W., Carne, A.
PDB entry 3i4j: Crystal structure of Aminotransferase, class III from Deinococcus radiodurans
Classification: TRANSFERASE
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-01
Authors: Fedorov, A.A., Fedorov, E.V., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i4k: Crystal structure of Muconate lactonizing enzyme from Corynebacterium glutamicum
Classification: ISOMERASE
Source organism: Corynebacterium glutamicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-01
Authors: Fedorov, A.A., Fedorov, E.V., Sauder, J.M., Burley, S.K., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i4l: Structural characterization for the nucleotide binding ability of subunit A with AMP-PNP of the A1AO ATP synthase
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-01
Authors: Manimekalai, S.M.S., Kumar, A., Balakrishna, A.M., Jeyakanthan, J., Gruber, G.
PDB entry 3i4m: 8-oxoguanine containing RNA polymerase II elongation complex D
Classification: TRANSCRIPTION,TRANSFERASE/DNA-RNA HYBRID
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.7 Å
Deposited: 2009-07-02
Authors: Damsma, G.E., Cramer, P.
PDB entry 3i4n: 8-oxoguanine containing RNA polymerase II elongation complex E
Classification: TRANSCRIPTION,TRANSFERASE/DNA-RNA HYBRID
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2009-07-02
Authors: Damsma, G.E., Cramer, P.
PDB entry 3i4o: Crystal Structure of Translation Initiation Factor 1 from Mycobacterium tuberculosis
Classification: TRANSLATION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2009-07-02
Authors: Hatzopoulos, G.N., Mueller-Dieckmann, J.
PDB entry 3i4p: Crystal structure of AsnC family transcriptional regulator from Agrobacterium tumefaciens
Classification: transcription regulator
Source organism: Agrobacterium tumefaciens str. C58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-02
Authors: Cymborowski, M., Chruszcz, M., Luo, H., Xu, X., Savchenko, A., Edwards, A., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3i4q: Structure of a putative inorganic pyrophosphatase from the oil-degrading bacterium Oleispira antarctica
Classification: HYDROLASE
Source organism: Oleispira antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2009-07-02
Authors: Singer, A.U., Evdokimova, E., Kagan, O., Edwards, A.M., Joachimiak, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3i4r: Nup107(aa658-925)/Nup133(aa517-1156) complex, H.sapiens
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.53 Å
Deposited: 2009-07-02
Authors: Whittle, J.R.R., Schwartz, T.U.
PDB entry 3i4s: CRYSTAL STRUCTURE OF HISTIDINE TRIAD PROTEIN blr8122 FROM Bradyrhizobium japonicum
Classification: HYDROLASE
Source organism: Bradyrhizobium japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-07-02
Authors: Patskovsky, Y., Ramagopal, U., Toro, R., Freeman, J., Do, J., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i4t: Crystal structure of putative diphthine synthase from Entamoeba histolytica
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2009-07-02
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3i4u: Crystal Structure Analysis of a helicase associated domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-02
Authors: Kudlinzki, D., Ficner, R.
PDB entry 3i4v: Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1CP in complex with 3-chlorocatechol
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-03
Authors: Matera, I., Ferraroni, M., Briganti, F., Scozzafava, A.
PDB entry 3i4w: Crystal Structure of the third PDZ domain of PSD-95
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2009-07-03
Authors: Camara-Artigas, A., Gavira, J.A.
PDB entry 3i4x: Crystal structure of the dimethylallyl tryptophan synthase FgaPT2 from Aspergillus fumigatus in complex with Trp and DMSPP
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-03
Authors: Schall, C., Zocher, G., Stehle, T.
PDB entry 3i4y: Crystal structure determination of Catechol 1,2-Dioxygenase from Rhodococcus opacus 1CP in complex with 3,5-dichlorocatechol
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-07-03
Authors: Matera, I., Ferraroni, M., Kolomytseva, M., Briganti, F., Scozzafava, A.
PDB entry 3i4z: Crystal structure of the dimethylallyl tryptophan synthase FgaPT2 from Aspergillus fumigatus
Classification: TRANSFERASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2009-07-03
Authors: Schall, C., Zocher, G., Stehle, T.
PDB entry 3i50: Crystal structure of the West Nile Virus envelope glycoprotein in complex with the E53 antibody Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; West Nile virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-07-03
Authors: Nybakken, G.E., Warren, J.T., Chen, B.R., Nelson, C.A., Fremont, D.H.
PDB entry 3i51: Crystal structure determination of Catechol 1,2-Dioxygenase from Rhodococcus opacus 1CP in complex with 4,5-dichlorocatechol
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus opacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-03
Authors: Matera, I., Ferraroni, M., Kolomytseva, M., Briganti, F., Scozzafava, A.
PDB entry 3i52: Ternary complex structure of leucoanthocyanidin reductase from vitis vinifera
Classification: OXIDOREDUCTASE
Source organism: Vitis vinifera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2009-07-03
Authors: Mauge, C., Gargouri, M., d'Estaintot, B.L., Granier, T., Gallois, B.
PDB entry 3i53: Crystal structure of an O-methyltransferase (NcsB1) from neocarzinostatin biosynthesis in complex with S-adenosyl-L-homocysteine (SAH)
Classification: TRANSFERASE
Source organism: Streptomyces carzinostaticus subsp. neocarzinostaticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2009-07-03
Authors: Cooke, H.A., Bruner, S.D.
PDB entry 3i54: Crystal structure of MtbCRP in complex with cAMP
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-03
Authors: Reddy, M.C., Palaninathan, S.K., Bruning, J.B., Thurman, C., Smith, D., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 3i55: Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Haloarcula marismortui; Haloarcula marismortui ATCC 43049; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2009-07-03
Authors: Gurel, G., Blaha, G., Steitz, T.A., Moore, P.B.
PDB entry 3i56: Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Haloarcula marismortui; Haloarcula marismortui ATCC 43049
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-07-03
Authors: Gurel, G., Blaha, G., Steitz, T.A., Moore, P.B.
PDB entry 3i57: Type 2 repeat of the mucus binding protein MUB from Lactobacillus reuteri
Classification: PROTEIN BINDING
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-03
Authors: Hemmings, A.M., MacKenzie, D.A., Tailford, L.E., Juge, N.
PDB entry 3i58: Crystal structure of an O-methyltransferase (NcsB1) from neocarzinostatin biosynthesis in complex with S-adenosyl-L-homocysteine (SAH) and 2-hydroxy-7-methoxy-5-methyl naphthoic acid (NA)
Classification: TRANSFERASE
Source organism: Streptomyces carzinostaticus subsp. neocarzinostaticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2009-07-03
Authors: Cooke, H.A., Bruner, S.D.
PDB entry 3i59: Crystal structure of MtbCRP in complex with N6-cAMP
Classification: DNA BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2009-07-03
Authors: Reddy, M.C., Palaninathan, S.K., Bruning, J.B., Thurman, C., Smith, D., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 3i5a: Crystal structure of full-length WpsR from Pseudomonas syringae
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas syringae pv. tomato
Experimental method: X-RAY DIFFRACTION
Resolution: 2.796 Å
Deposited: 2009-07-03
Authors: Navarro, M.V.A.S., De, N., Sondermann, H.
PDB entry 3i5b: Crystal structure of the isolated GGDEF domain of WpsR from Pseudomonas aeruginosa
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.043 Å
Deposited: 2009-07-03
Authors: Navarro, M.V.A.S., De, N., Sondermann, H.
PDB entry 3i5c: Crystal structure of a fusion protein containing the leucine zipper of GCN4 and the GGDEF domain of WspR from Pseudomonas aeruginosa
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2009-07-03
Authors: Navarro, M.V.A.S., De, N., Sondermann, H.
PDB entry 3i5d: Crystal structure of the ATP-gated P2X4 ion channel in the closed, apo state at 3.5 Angstroms (R3)
Classification: TRANSPORT PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 3.46 Å
Deposited: 2009-07-05
Authors: Kawate, T., Michel, J.C., Gouaux, E.
PDB entry 3i5e: Allosteric Modulation of DNA by Small Molecules
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 0.98 Å
Deposited: 2009-07-05
Authors: Chenoweth, D.M., Dervan, P.B.
PDB entry 3i5f: Crystal structure of squid MG.ADP myosin S1
Classification: CONTRACTILE PROTEIN
Source organism: Loligo pealei; Todarodes pacificus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-07-05
Authors: Yang, Y., Gourinath, S., Kovacs, M., Nyitray, L., Reutzel, R., Himmel, D.M., O'Neall-Hennessey, E., Reshetnikova, L., Szent-Gyorgyi, A.G., Brown, J.H., Cohen, C.
PDB entry 3i5g: Crystal structure of rigor-like squid myosin S1
Classification: CONTRACTILE PROTEIN
Source organism: Loligo pealei; Todarodes pacificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-05
Authors: Yang, Y., Gourinath, S., Kovacs, M., Nyitray, L., Reutzel, R., Himmel, D.M., O'Neall-Hennessey, E., Reshetnikova, L., Szent-Gyorgyi, A.G., Brown, J.H., Cohen, C.
PDB entry 3i5h: The crystal structure of rigor like squid myosin S1 in the absence of nucleotide
Classification: CONTRACTILE PROTEIN
Source organism: Loligo pealei; Todarodes pacificus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2009-07-05
Authors: Yang, Y., Gourinath, S., Kovacs, M., Nyitray, L., Reutzel, R., Himmel, D.M., O'Neall-Hennessey, E., Reshetnikova, L., Szent-Gyorgyi, A.G., Brown, J.H., Cohen, C.
PDB entry 3i5i: The crystal structure of squid myosin S1 in the presence of SO4 2-
Classification: CONTRACTILE PROTEIN
Source organism: Loligo pealei; Todarodes pacificus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2009-07-05
Authors: Yang, Y., Gourinath, S., Kovacs, M., Nyitray, L., Reutzel, R., Himmel, D.M., O'Neall-Hennessey, E., Reshetnikova, L., Szent-Gyorgyi, A.G., Brown, J.H., Cohen, C.
PDB entry 3i5j: Diferric Resting State Toluene 4-Monooxygenase HD complex
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas mendocina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-05
Authors: Bailey, L.J., Fox, B.G.
PDB entry 3i5k: Crystal structure of the NS5B polymerase from Hepatitis C Virus (HCV) strain JFH1
Classification: TRANSFERASE
Source organism: Hepatitis C virus JFH-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-05
Authors: Simister, P.C., Schmitt, M., Lohmann, V., Bressanelli, S.
PDB entry 3i5l: Allosteric Modulation of DNA by Small Molecules
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2009-07-05
Authors: Chenoweth, D.M., Dervan, P.B.
PDB entry 3i5m: Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera
Classification: OXIDOREDUCTASE
Source organism: Vitis vinifera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2009-07-06
Authors: Mauge, C., Gargouri, M., d'Estaintot, B.L., Granier, T., Gallois, B.
PDB entry 3i5n: Crystal structure of c-Met with triazolopyridazine inhibitor 13
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-06
Authors: Bellon, S.F., Whittington, D.A., Long, A.M., Boezio, A.A.
PDB entry 3i5o: The X-ray crystal structure of a thermophilic cellobiose binding protein bound with cellopentaose
Classification: SUGAR BINDING PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-07-06
Authors: Cuneo, M.J., Hellinga, H.W.
PDB entry 3i5p: Nup170(aa979-1502), S.cerevisiae
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-07-06
Authors: Whittle, J.R.R., Schwartz, T.U.
PDB entry 3i5q: Nup170(aa1253-1502) at 2.2 A, S.cerevisiae
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.204 Å
Deposited: 2009-07-06
Authors: Whittle, J.R.R., Schwartz, T.U.
PDB entry 3i5r: PI3K SH3 domain in complex with a peptide ligand
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-06
Authors: Batra-Safferling, R., Granzin, J., Modder, S., Hoffmann, S., Willbold, D.
PDB entry 3i5s: Crystal structure of PI3K SH3
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-07-06
Authors: Batra-Safferling, R., Granzin, J., Modder, S., Hoffmann, S., Willbold, D.
PDB entry 3i5t: CRYSTAL STRUCTURE OF AMINOTRANSFERASE PRK07036 FROM Rhodobacter sphaeroides KD131
Classification: TRANSFERASE
Source organism: Rhodobacter sphaeroides 2.4.1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-06
Authors: Patskovsky, Y., Toro, R., Freeman, J., Do, J., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i5u: Crystal structure of an O-methyltransferase (NcsB1) from neocarzinostatin biosynthesis in complex with S-adenosylmethionine (SAM) and 2-hydroxy-5-methyl naphthoic acid (MNA)
Classification: TRANSFERASE
Source organism: Streptomyces carzinostaticus subsp. neocarzinostaticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-06
Authors: Cooke, H.A., Bruner, S.D.
PDB entry 3i5v: Crystal structure of beta toxin 275-280 from Staphylococcus aureus
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-06
Authors: Huseby, M., Shi, K., Kruse, A.C., Ohlendorf, D.H.
PDB entry 3i5w: Crystal structure of human alpha-defensin 5 (mutant R13H)
Classification: ANTIMICROBIAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2009-07-06
Authors: Pazgier, M., Lu, W.
PDB entry 3i5x: Structure of Mss116p bound to ssRNA and AMP-PNP
Classification: Hydrolase/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-06
Authors: Del Campo, M., Lambowitz, A.M.
PDB entry 3i5y: Structure of Mss116p bound to ssRNA containing a single 5-BrU and AMP-PNP
Classification: Hydrolase/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2009-07-06
Authors: Del Campo, M., Lambowitz, A.M.
PDB entry 3i5z: Crystal structure of ERK2 bound to (S)-N-(2-hydroxy-1-phenylethyl)-4-(5-methyl-2-(phenylamino)pyrimidin-4-yl)-1H-pyrrole-2-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-06
Authors: Jacobs, M.D., Xie, X.
PDB entry 3i60: Crystal structure of ERK2 bound to (S)-4-(2-(2-chlorophenylamino)-5-methylpyrimidin-4-yl)-N-(2-hydroxy-1-phenylethyl)-1H-pyrrole-2-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-06
Authors: Jacobs, M.D., Xie, X.
PDB entry 3i61: Structure of Mss116p bound to ssRNA and ADP-Beryllium Fluoride
Classification: Hydrolase/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-06
Authors: Del Campo, M., Lambowitz, A.M.
PDB entry 3i62: Structure of Mss116p bound to ssRNA and ADP-Aluminum Fluoride
Classification: Hydrolase/RNA
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-07-06
Authors: Del Campo, M., Lambowitz, A.M.
PDB entry 3i63: Peroxide Bound Toluene 4-Monooxygenase
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas mendocina
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2009-07-06
Authors: Bailey, L.J., Fox, B.G.
PDB entry 3i64: Crystal structure of an O-methyltransferase (NcsB1) from neocarzinostatin biosynthesis in complex with S-adenosyl-L-homocysteine (SAH) and 1,4-dihydroxy-2-naphthoic acid (DHN)
Classification: TRANSFERASE
Source organism: Streptomyces carzinostaticus subsp. neocarzinostaticus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-07-06
Authors: Cooke, H.A., Bruner, S.D.
PDB entry 3i65: Plasmodium falciparum dihydroorotate dehydrogenase bound with triazolopyrimidine-based inhibitor DSM1
Classification: OXIDOREDUCTASE
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-06
Authors: Deng, X., Phillips, M.A.
PDB entry 3i67: Ribonuclease A by LB nanotemplate method after high X-Ray dose on ESRF ID14-2 beamline
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-07-06
Authors: Pechkova, E., Tripathi, S.K., Ravelli, R., McSweeney, S., Nicolini, C.
PDB entry 3i68: Plasmodium falciparum dihydroorotate dehydrogenase bound with triazolopyrimidine-based inhibitor DSM2
Classification: OXIDOREDUCTASE
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-06
Authors: Deng, X., Phillips, M.A.
PDB entry 3i69: Apo Glutathione Transferase A1-1 GIMF-helix mutant
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2009-07-06
Authors: Balogh, L.M., Le Trong, I., Stenkamp, R.E., Atkins, W.M.
PDB entry 3i6a: Human GST A1-1 GIMF mutant with Glutathione
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2009-07-06
Authors: Balogh, L.M., Le Trong, I., Stenkamp, R.E., Atkins, W.M.
PDB entry 3i6b: Crystal structure of YrbI lacking the last 8 residues, in complex with Kdo and inorganic phosphate
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2009-07-06
Authors: Biswas, T., Tsodikov, O.V.
PDB entry 3i6c: Structure-Based Design of Novel PIN1 Inhibitors (II)
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-07-06
Authors: Greasley, S.E., Ferre, R.A.
PDB entry 3i6d: Crystal structure of PPO from bacillus subtilis with AF
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-07-06
Authors: Shen, Y.
PDB entry 3i6e: CRYSTAL STRUCTURE OF MUCONATE LACTONIZING ENZYME FROM Ruegeria pomeroyi.
Classification: ISOMERASE
Source organism: Ruegeria pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-07
Authors: Fedorov, A.A., Fedorov, E.V., Sauder, J.M., Burley, S.K., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i6f: Ribonuclease A by Classical hanging drop method before high X-Ray dose on ESRF ID14-2 beamline
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-07-07
Authors: Pechkova, E., Tripathi, S.K., Ravelli, R., McSweeney, S., Nicolini, C.
PDB entry 3i6g: Newly identified epitope Mn2 from SARS-CoV M protein complexed withHLA-A*0201
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.201 Å
Deposited: 2009-07-07
Authors: Liu, J.
PDB entry 3i6h: Ribonuclease A by LB nanotemplate method before high X-Ray dose on ESRF ID14-2 beamline
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-07-07
Authors: Pechkova, E., Tripathi, S.K., Ravelli, R., McSweeney, S., Nicolini, C.
PDB entry 3i6i: Structure of the binary complex leucoanthocyanidin reductase - NADPH from vitis vinifera
Classification: OXIDOREDUCTASE
Source organism: Vitis vinifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-07-07
Authors: Mauge, C., Gargouri, M., d'Estaintot, B.L., Granier, T., Gallois, B.
PDB entry 3i6j: Ribonuclease A by Classical hanging drop method after high X-Ray dose on ESRF ID14-2 beamline
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-07-07
Authors: Pechkova, E., Tripathi, S.K., Ravelli, R., McSweeney, S., Nicolini, C.
PDB entry 3i6k: Newly identified epitope from SARS-CoV membrane protein complexed with HLA-A*0201
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-07
Authors: Liu, J., Sun, Y., Qi, J., Chu, F., Wu, H., Gao, F., Li, T., Yan, J., Gao, G.F.
PDB entry 3i6l: Newly identified epitope N1 derived from SARS-CoV N protein complexed with HLA-A*2402
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-07
Authors: Liu, J.W.
PDB entry 3i6m: 3D Structure of Torpedo californica acetylcholinesterase complexed with N-piperidinopropyl-galanthamine
Classification: HYDROLASE
Source organism: Torpedo californica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2009-07-07
Authors: Lamba, D., Bartolucci, C.
PDB entry 3i6n: Mode of Binding of the Tuberculosis Prodrug Isoniazid to Peroxidases: Crystal Structure of Bovine Lactoperoxidase with Isoniazid at 2.7 Resolution
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-07-07
Authors: Singh, A.K., Kumar, R.P., Pandey, N., Singh, N., Sinha, M., Bhushan, A., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 3i6o: Crystal structure of wild type HIV-1 protease with macrocyclic inhibitor GRL-0216A
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1 (BRU ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2009-07-07
Authors: Chumanevich, A.A., Wang, Y.-F., Kovalevsky, A.Y., Weber, I.T.
PDB entry 3i6p: Ethanolamine Utilization Microcompartment Shell Subunit, EutM
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-07
Authors: Tanaka, S., Sawaya, M.R., Yeates, T.O.
PDB entry 3i6q: Structure of the binary complex leucoanthocyanidin reductase-NADPH from vitis vinifera
Classification: OXIDOREDUCTASE
Source organism: Vitis vinifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2009-07-07
Authors: Mauge, C., Gargouri, M., d'Estaintot, B.L., Granier, T., Gallois, B.
PDB entry 3i6r: Plasmodium falciparum dihydroorotate dehydrogenase bound with triazolopyrimidine-based inhibitor DSM74
Classification: OXIDOREDUCTASE
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-07
Authors: Deng, X., Phillips, M.A.
PDB entry 3i6s: Crystal Structure of the plant subtilisin-like protease SBT3
Classification: HYDROLASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-07
Authors: Rose, R., Ottmann, C.
PDB entry 3i6t: Crystal structure of muconate cycloisomerase from Jannaschia sp.
Classification: ISOMERASE
Source organism: Jannaschia sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-07
Authors: Bonanno, J.B., Freeman, J., Bain, K.T., Do, J., Romero, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i6u: Structure and Activation Mechanism of the CHK2 DNA-Damage Checkpoint Kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-07-07
Authors: Pavletich, N.P.
PDB entry 3i6v: Crystal structure of a periplasmic His/Glu/Gln/Arg/opine family-binding protein from Silicibacter pomeroyi in complex with lysine
Classification: TRANSPORT PROTEIN
Source organism: Silicibacter pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-07
Authors: Bonanno, J.B., Rutter, M., Bain, K.T., Miller, S., Romero, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i6w: Structure and Activation Mechanism of the CHK2 DNA-Damage Checkpoint Kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2009-07-07
Authors: Pavletich, N.P.
PDB entry 3i6x: Crystal structure of the calponin homology domain of IQGAP1
Classification: CALMODULIN-BINDING, MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-07
Authors: Kurella, V.B.
PDB entry 3i6y: Structure of an esterase from the oil-degrading bacterium Oleispira antarctica
Classification: HYDROLASE
Source organism: Oleispira antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-07-07
Authors: Singer, A.U., Evdokimova, E., Kagan, O., Edwards, A.M., Joachimiak, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3i6z: 3D Structure of Torpedo californica acetylcholinesterase complexed with N-saccharinohexyl-galanthamine
Classification: HYDROLASE
Source organism: Torpedo californica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2009-07-07
Authors: Lamba, D., Bartolucci, C.
PDB entry 3i70: Long-wavelength structure of NtA
Classification: laminin binding protein
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-07
Authors: Stetefeld, J.
PDB entry 3i71: Ethanolamine Utilization Microcompartment Shell Subunit, EutK C-terminal domain
Classification: UNKNOWN FUNCTION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-07
Authors: Tanaka, S., Sawaya, M.R., Yeates, T.O.
PDB entry 3i72: Structural characterization for the nucleotide binding ability of subunit A with SO4 of the A1AO ATP synthase
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2009-07-07
Authors: Manimekalai, S.M.S., Kumar, A., Balakrishna, A.M., Gruber, G.
PDB entry 3i73: Structural characterization for the nucleotide binding ability of subunit A with ADP of the A1AO ATP synthase
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-08
Authors: Manimekalai, S.M.S., Kumar, A., Balakrishna, A.M., Gruber, G.
PDB entry 3i74: Crystal Structure of the plant subtilisin-like protease SBT3 in complex with a chloromethylketone inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Solanum lycopersicum; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-08
Authors: Rose, R., Ottmann, C.
PDB entry 3i75: Antibody Structure
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-07-08
Authors: Isaacs, N.W., Riboldi-Tunnicliffe, A.
PDB entry 3i76: The crystal structure of the orthorhombic form of the putative HAD-hydrolase YfnB from Bacillus subtilis bound to magnesium reveals interdomain movement
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-08
Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Tang, B.K., Romero, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i77: 35/99/170-loops of FXa in SGT
Classification: HYDROLASE
Source organism: Streptomyces griseus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-08
Authors: Page, M.J., Di Cera, E.
PDB entry 3i78: 35/99/170/186/220-loops of FXa in SGT
Classification: HYDROLASE
Source organism: Streptomyces griseus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-07-08
Authors: Page, M.J., Di Cera, E.
PDB entry 3i79: Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1)
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2009-07-08
Authors: Larson, E.T., Merritt, E.A., Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
PDB entry 3i7a: Crystal structure of Putative metal-dependent phosphohydrolase (YP_926882.1) from Shewanella amazonensis SB2B at 2.06 A resolution
Classification: HYDROLASE
Source organism: Shewanella amazonensis SB2B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2009-07-08
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3i7b: Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with bumped kinase inhibitor NM-PP1
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.988 Å
Deposited: 2009-07-08
Authors: Larson, E.T., Merritt, E.A., Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
PDB entry 3i7c: Calcium-Dependent Protein Kinase 1 from Toxoplasma gondii (TgCDPK1) in complex with bumped kinase inhibitor NA-PP2
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2009-07-08
Authors: Larson, E.T., Merritt, E.A., Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
PDB entry 3i7d: Crystal structure of sugar phosphate isomerase from a cupin superfamily SPO2919 from Silicibacter pomeroyi (YP_168127.1) from SILICIBACTER POMEROYI DSS-3 at 2.30 A resolution
Classification: ISOMERASE
Source organism: Ruegeria pomeroyi DSS-3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-08
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3i7e: Co-crystal structure of HIV-1 protease bound to a mutant resistant inhibitor UIC-98038
Classification: HYDROLASE
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-07-08
Authors: Hong, L., Tang, J., Ghosh, A.
PDB entry 3i7f: Aspartyl tRNA synthetase from Entamoeba histolytica
Classification: LIGASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-08
Authors: Arakaki, T., Merritt, E.A., Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
PDB entry 3i7g: MMP-13 in complex with a non zinc-chelating inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-07-08
Authors: Farrow, N.A.
PDB entry 3i7h: Crystal Structure of DDB1 in Complex with the H-Box Motif of HBX
Classification: PROTEIN BINDING/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-07-08
Authors: Li, T., Robert, E.I., Breugel, P.C.V., Strubin, M., Zheng, N.
PDB entry 3i7i: MMP-13 in complex with a non zinc-chelating inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.208 Å
Deposited: 2009-07-08
Authors: Farrow, N.A., Margarit, S.M.
PDB entry 3i7j: Crystal Structure of a beta-lactamase (Mb2281c) from Mycobacterium bovis, Northeast Structural Genomics Consortium Target MbR246
Classification: HYDROLASE
Source organism: Mycobacterium bovis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-07-08
Authors: Forouhar, F., Lew, S., Seetharaman, J., Sahdev, S., Xiao, R., Ciccosanti, C., Wang, H., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3i7k: Crystal Structure of DDB1 in Complex with the H-Box Motif of WHX
Classification: PROTEIN BINDING/VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-08
Authors: Li, T., Robert, E.I., Breugel, P.C.V., Strubin, M., Zheng, N.
PDB entry 3i7l: Crystal Structure of DDB1 in Complex with the H-Box Motif of DDB2
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-08
Authors: Li, T., Robert, E.I., Breugel, P.C.V., Strubin, M., Zheng, N.
PDB entry 3i7m: N-terminal domain of Xaa-Pro dipeptidase from Lactobacillus brevis.
Classification: HYDROLASE
Source organism: Lactobacillus brevis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2009-07-08
Authors: Osipiuk, J., Xu, X., Cui, H., Ng, J., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3i7n: Crystal Structure of DDB1 in Complex with the H-Box Motif of WDTC1
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-08
Authors: Li, T., Robert, E.I., Breugel, P.C.V., Strubin, M., Zheng, N.
PDB entry 3i7o: Crystal Structure of DDB1 in Complex with the H-Box Motif of IQWD1
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-08
Authors: Li, T., Robert, E.I., Breugel, P.C.V., Strubin, M., Zheng, N.
PDB entry 3i7p: Crystal Structure of DDB1 in Complex with the H-Box Motif of WDR40A
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-07-08
Authors: Li, T., Robert, E.I., Breugel, P.C.V., Strubin, M., Zheng, N.
PDB entry 3i7q: Dihydrodipicolinate synthase mutant - K161A
Classification: LYASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-08
Authors: Dobson, R.C.J., Jameson, G.B., Gerrard, J.A., Soares da Costa, T.P.
PDB entry 3i7r: Dihydrodipicolinate synthase - K161R
Classification: LYASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-07-08
Authors: Dobson, R.C.J., Jameson, G.B., Gerrard, J.A., Soares da Costa, T.P.
PDB entry 3i7s: Dihydrodipicolinate synthase mutant - K161A - with the substrate pyruvate bound in the active site.
Classification: LYASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-08
Authors: Dobson, R.C.J., Jameson, G.B., Gerrard, J.A., Soares da Costa, T.P.
PDB entry 3i7t: Crystal structure of Rv2704, a member of highly conserved YjgF/YER057c/UK114 family, from Mycobacterium tuberculosis
Classification: UNKNOWN FUNCTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2009-07-09
Authors: Thakur, K.G., Gopal, B.
PDB entry 3i7u: Crystal structure of AP4A hydrolase (aq_158) from Aquifex aeolicus VF5
Classification: HYDROLASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-07-09
Authors: Jeyakanthan, J., Kanaujia, S.P., Nakagawa, N., Sekar, K., Kuramitsu, S., Shinkai, A., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 3i7v: Crystal structure of AP4A hydrolase complexed with AP4A (ATP) (aq_158) from Aquifex aeolicus Vf5
Classification: HYDROLASE
Source organism: Aquifex aeolicus Vf5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-07-09
Authors: Jeyakanthan, J., Kanaujia, S.P., Nakagawa, N., Sekar, K., Kuramitsu, S., Shinkai, A., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 3i7w: High pressure structure of wild-type RNase A (0.67 GPa)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2009-07-09
Authors: Lewinski, K., Kurpiewska, K., Dziubek, K., Katrusiak, A., Font, J., Ribo, M., Vilanova, M.
PDB entry 3i7x: High pressure structure of I106A RNase A variant (0.35 GPa)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-07-09
Authors: Lewinski, K., Kurpiewska, K., Dziubek, K., Katrusiak, A., Font, J., Ribo, M., Vilanova, M.
PDB entry 3i7y: High pressure structure of I106A variant of RNase A (0.48 GPa)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-09
Authors: Lewinski, K., Kurpiewska, K., Dziubek, K., Katrusiak, A., Font, J., Ribo, M., Vilanova, M.
PDB entry 3i7z: Protein Tyrosine Phosphatase 1B - Transition state analog for the first catalytic step
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-09
Authors: Brandao, T.A.S., Johnson, S.J., Hengge, A.C.
PDB entry 3i80: Protein Tyrosine Phosphatase 1B - Transition state analog for the second catalytic step
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-07-09
Authors: Brandao, T.A.S., Johnson, S.J., Hengge, A.C.
PDB entry 3i81: Crystal structure of insulin-like growth factor 1 receptor (IGF-1R-WT) complex with BMS-754807 [1-(4-((5-cyclopropyl-1H-pyrazol-3-yl)amino)pyrrolo[2,1-f][1,2,4]triazin-2-yl)-N-(6-fluoro-3-pyridinyl)-2-methyl-L-prolinamide]
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2009-07-09
Authors: Sack, J.S.
PDB entry 3i82: Ethanolamine Utilization Microcompartment Shell Subunit, EutL Closed Form
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2009-07-09
Authors: Tanaka, S., Sawaya, M.R., Yeates, T.O.
PDB entry 3i83: Crystal structure of 2-dehydropantoate 2-reductase from Methylococcus capsulatus
Classification: OXIDOREDUCTASE
Source organism: Methylococcus capsulatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-07-09
Authors: Bonanno, J.B., Gilmore, M., Bain, K.T., Chang, S., Sampathkumar, P., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i84: The Crystal Structure of Human EMMPRIN N-terminal Domain 1 in P6(1)22 space group
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-09
Authors: Luo, J., Gilliland, G.L.
PDB entry 3i85: The Crystal Structure of Human EMMPRIN N-terminal Domain 1
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-07-09
Authors: Luo, J., Gilliland, G.L.
PDB entry 3i86: Crystal structure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204
Classification: HYDROLASE
Source organism: Mycobacterium avium subsp. paratuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-07-09
Authors: Ramyar, K.X., Lingle, C.K., McWhorter, W.J., Bouyain, S., Bannantine, J.P., Geisbrecht, B.V.
PDB entry 3i87: Ethanolamine Utilization Microcompartment Shell Subunit, EutL Open Form
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-07-09
Authors: Tanaka, S., Sawaya, M.R., Yeates, T.O.
PDB entry 3i89: Crystal Structure of DDB1 in Complex with the H-Box Motif of WDR22
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-07-09
Authors: Li, T., Robert, E.I., Breugel, P.C.V., Strubin, M., Zheng, N.
PDB entry 3i8a: Staphylococcus aureus H30N, F98Y Dihydrofolate Reductase complexed with NADPH and 2,4-diamino-5-(3-(2,5-dimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120B)
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2009-07-09
Authors: Frey, K.M., Lombardo, M.N., Anderson, A.C.
PDB entry 3i8b: The crystal structure of xylulose kinase from Bifidobacterium adolescentis
Classification: TRANSFERASE
Source organism: Bifidobacterium adolescentis ATCC 15703
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-07-09
Authors: Zhang, Z., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3i8c: Crystal Structure of DDB1 in Complex with the H-Box Motif of WDR21A
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-07-09
Authors: Li, T., Robert, E.I., Breugel, P.C.V., Strubin, M., Zheng, N.
PDB entry 3i8d: The Pairing Geometry of the Hydrophobic Thymine Analog 2,4-Difluorotoluene in Duplex DNA as Analyzed by X-ray Crystallography
Classification: HYDROLASE/DNA
Source organism: Bacillus halodurans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2009-07-09
Authors: Egli, M., Pallan, P.S.