LiteFold/PDB huggingface dataset:
PDB entry 4duf: cytochrome P450 BM3h-2G9 MRI sensor bound to serotonin
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-21
Authors: Brustad, E.M., Lelyveld, V.S., Snow, C.D., Crook, N., Martinez, F.M., Scholl, T.J., Jasanoff, A., Arnold, F.H.
PDB entry 4dug: Crystal Structure of Circadian Clock Protein KaiC E318A Mutant
Classification: CIRCADIAN CLOCK PROTEIN, TRANSFERASE
Source organism: Synechococcus elongatus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.292 Å
Deposited: 2012-02-21
Authors: Egli, M., Mori, T., Pattanayek, R., Xu, Y., Qin, X., Johnson, C.H.
PDB entry 4duh: Crystal structure of 24 kDa domain of E. coli DNA gyrase B in complex with small molecule inhibitor
Classification: ISOMERASE/ISOMERASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-02-22
Authors: Brvar, M., Renko, M., Perdih, A., Solmajer, T., Turk, D.
PDB entry 4dui: DARPIN D1 binding to tubulin beta chain (not in complex)
Classification: DE NOVO PROTEIN
Source organism: ARTIFICIAL GENE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2012-02-22
Authors: Pecqueur, L., Duellberg, C., Dreier, B., Wang, Q., Jiang, C., Pluckthun, A., Surrey, T., Gigant, B., Knossow, M.
PDB entry 4duk: Carboxypeptidase T with L-BENZYLSUCCINIC ACID
Classification: HYDROLASE
Source organism: Thermoactinomyces vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2012-02-22
Authors: Kuznetsov, S.A., Timofeev, V.I., Akparov, V.K., Kuranova, I.P.
PDB entry 4dul: ANAC019 NAC domain crystal form IV
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-02-22
Authors: Lo Leggio, L., Helgstrand, C., Welner, D., Olsen, A.N., Skriver, K.
PDB entry 4dum: Co-crystal structure of eIF4E with inhibitor
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2012-02-22
Authors: Min, X., Johnstone, S., Walker, N., Wang, Z.
PDB entry 4dun: 1.76A X-ray Crystal Structure of a Putative Phenazine Biosynthesis PhzC/PhzF Protein from Clostridium difficile (strain 630)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Clostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2012-02-22
Authors: Brunzelle, J.S., Wawrzak, W., Kudritska, M., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4duo: Room-temperature X-ray structure of D-Xylose Isomerase in complex with 2Mg2+ ions and xylitol at pH 7.7
Classification: isomerase/isomerase inhibitor
Source organism: Streptomyces rubiginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-22
Authors: Kovalevsky, A.Y., Hanson, L., Langan, P.
PDB entry 4dup: Crystal Structure of a quinone oxidoreductase from Rhizobium etli CFN 42
Classification: OXIDOREDUCTASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2012-02-22
Authors: Kumaran, D., Rice, S., Evans, B., Foti, R., Gizzi, A., Hillerich, B., Kar, A., Lafleur, J., Seidel, R., Villigas, G., Zencheck, W., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4duq: The Structure of Ca2+-loaded S100A2 at 1.3A resolution
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2012-02-22
Authors: Koch, M., Fritz, G.
PDB entry 4dur: The X-ray Crystal Structure of Full-Length type II Human Plasminogen
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2012-02-22
Authors: Law, R.H.P., Caradoc-Davies, T., Whisstock, J.C.
PDB entry 4dus: Structure of Bace-1 (Beta-Secretase) in complex with N-((2S,3R)-1-(4-fluorophenyl)-3-hydroxy-4-((6'-neopentyl-3',4'-dihydrospiro[cyclobutane-1,2'-pyrano[2,3-b]pyridin]-4'-yl)amino)butan-2-yl)acetamide
Classification: HYDROLASE/Hydrolase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-02-22
Authors: Sickmier, E.A.
PDB entry 4dut: The structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis
Classification: TRANSFERASE
Source organism: Burkholderia thailandensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-02-22
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4duu: The X-ray Crystal Structure of Full-Length type I Human Plasminogen
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 5.2 Å
Deposited: 2012-02-22
Authors: Law, R.H.P., Caradoc-Davies, T., Whisstock, J.C.
PDB entry 4duv: E. coli (lacZ) beta-galactosidase (G974A) 2-deoxy-galactosyl-enzyme and bis-Tris complex
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-02-22
Authors: Wheatley, R.W., Lo, S., Janzcewicz, L.J., Dugdale, M.L., Huber, R.E.
PDB entry 4duw: E. coli (lacZ) beta-galactosidase (G974A) in complex with allolactose
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-02-22
Authors: Wheatley, R.W., Lo, S., Janzcewicz, L.J., Dugdale, M.L., Huber, R.E.
PDB entry 4dux: E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-02-22
Authors: Wheatley, R.W., Lo, S., Janzcewicz, L.J., Dugdale, M.L., Huber, R.E.
PDB entry 4duy: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U13C
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.386 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4duz: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U13C, bound with streptomycin
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.651 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4dv0: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.853 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4dv1: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G, bound with streptomycin
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.849 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4dv2: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.646 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4dv3: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A, bound with streptomycin
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.547 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4dv4: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A914G
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.651 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4dv5: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A914G, bound with streptomycin
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.683 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4dv6: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.297 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4dv7: Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G, bound with streptomycin
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.294 Å
Deposited: 2012-02-22
Authors: Demirci, H., Murphy IV, F., Murphy, E., Gregory, S.T., Dahlberg, A.E., Jogl, G.
PDB entry 4dv8: Anthrax Lethal Factor metalloproteinase in complex with the Hydroxamic acid based small molecule PT8421
Classification: HYDROLASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.632 Å
Deposited: 2012-02-22
Authors: Margosiak, S.A., Sankaran, B.
PDB entry 4dv9: Crystal structure of BACE1 with its inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.076 Å
Deposited: 2012-02-23
Authors: Xu, Y.C., Chen, W.Y., Li, L., Chen, T.T.
PDB entry 4dva: The crystal structure of human urokinase-type plasminogen activator catalytic domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2012-02-23
Authors: Jiang, L., Botkjaer, K.A., Andersen, L.M., Yuan, C., Andreasen, P.A., Huang, M.
PDB entry 4dvb: The crystal structure of the Fab fragment of pro-uPA antibody mAb-112
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2012-02-23
Authors: Jiang, L., Botkjaer, K.A., Andersen, L.M., Yuan, C., Andreasen, P.A., Huang, M.
PDB entry 4dvc: Structural and functional studies of TcpG, the Vibrio cholerae DsbA disulfide-forming protein required for pilus and cholera toxin production
Classification: OXIDOREDUCTASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2012-02-23
Authors: Walden, P.M., Martin, J.L.
PDB entry 4dvd: Crystal structure of the disulphide linked knotted homodimer of Psu
Classification: TRANSCRIPTION REGULATOR
Source organism: Enterobacteria phage P4
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-02-23
Authors: Banerjee, R., Nath, S., Sen, U.
PDB entry 4dve: Crystal structure at 2.1 A of the S-component for biotin from an ECF-type ABC transporter
Classification: TRANSPORT PROTEIN
Source organism: Lactococcus lactis subsp. cremoris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2012-02-23
Authors: Berntsson, R.P.-A., ter Beek, J., Majsnerowska, M., Duurkens, R., Puri, P., Poolman, B., Slotboom, D.J.
PDB entry 4dvf: Crystal structure of BACE1 with its inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.803 Å
Deposited: 2012-02-23
Authors: Xu, Y.C., Chen, W.Y., Li, L., Chen, T.T.
PDB entry 4dvg: Crystal structure of E. histolytica Formin1 bound to EhRho1-GTPgammaS
Classification: GTP binding/Actin binding Proteins
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.604 Å
Deposited: 2012-02-23
Authors: Bosch, D.E., Siderovski, D.P.
PDB entry 4dvh: Crystal structure of Trypanosoma cruzi mitochondrial iron superoxide dismutase
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2012-02-23
Authors: Larrieux, N., Buschiazzo, A.
PDB entry 4dvi: Crystal structure of Tankyrase 1 with IWR2
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-02-23
Authors: Huang, X.
PDB entry 4dvj: Crystal structure of a putative zinc-dependent alcohol dehydrogenase protein from Rhizobium etli CFN 42
Classification: OXIDOREDUCTASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2012-02-23
Authors: Agarwal, R., Chamala, S., Evans, B., Foti, R., Gizzi, A., Hellerich, B., Kar, A., Lafleur, J., Siedel, R., Villigas, G., Zencheck, W., Almo, S.C., Swaminathan, S., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4dvk: Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 strain NCP-7
Classification: VIRAL PROTEIN
Source organism: Bovine viral diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2012-02-23
Authors: Krey, T., Bontems, F., Vonrhein, C., Vaney, M.-C., Bricogne, G., Ruemenapf, T., Rey, F.A.
PDB entry 4dvl: Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with 2'-3'-cyclo-UMP
Classification: VIRAL PROTEIN
Source organism: Bovine viral diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2012-02-23
Authors: Krey, T., Bontems, F., Vonrhein, C., Vaney, M.-C., Bricogne, G., Ruemenapf, T., Rey, F.A.
PDB entry 4dvn: Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with 2'-UMP
Classification: VIRAL PROTEIN
Source organism: Bovine viral diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2012-02-23
Authors: Krey, T., Bontems, F., Vonrhein, C., Vaney, M.-C., Bricogne, G., Ruemenapf, T., Rey, F.A.
PDB entry 4dvo: Room-temperature joint X-ray/neutron structure of D-xylose isomerase in complex with 2Ni2+ and per-deuterated D-sorbitol at pH 5.9
Classification: ISOMERASE
Source organism: Streptomyces rubiginosus
Experimental method: NEUTRON DIFFRACTION, X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-23
Authors: Kovalevsky, A.Y., Hanson, L., Langan, P.
PDB entry 4dvq: Structure of human aldosterone synthase, CYP11B2, in complex with deoxycorticosterone
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2012-02-23
Authors: Strushkevich, N., Shen, L., Tempel, W., Arrowsmith, C., Edwards, A., Usanov, S.A., Park, H.-W.
PDB entry 4dvr: Crystal structure of YU2 gp120 core in complex with Fab 48d and NBD-557
Classification: IMMUNE SYSTEM/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens; Human immunodeficiency virus type 1 group M subtype B (isolate YU-2)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-02-23
Authors: Kwon, Y.D., Kwong, P.D.
PDB entry 4dvs: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-557
Classification: viral protein/transcription inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-02-23
Authors: Kwon, Y.D., Kwong, P.D.
PDB entry 4dvt: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AS-II-37
Classification: viral protein/transcription inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-02-23
Authors: Kwon, Y.D., Kwong, P.D.
PDB entry 4dvv: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AS-I-261
Classification: viral protein/transcription inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2012-02-23
Authors: Kwon, Y.D., Kwong, P.D.
PDB entry 4dvw: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with MAE-II-167
Classification: viral protein/transcription inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-02-23
Authors: Kwon, Y.D., Kwong, P.D.
PDB entry 4dvx: Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with MAE-II-188
Classification: viral protein/transcription inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-02-23
Authors: Kwon, Y.D., Kwong, P.D.
PDB entry 4dvy: Crystal structure of the Helicobacter pylori CagA oncoprotein
Classification: ONCOPROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2012-02-23
Authors: Hayashi, T., Senda, M., Morohashi, H., Higashi, H., Horio, M., Kashiba, Y., Nagase, L., Sasaya, D., Shimizu, T., Venugopalan, N., Kumeta, H., Noda, N., Inagaki, F., Senda, T., Hatakeyama, M.
PDB entry 4dvz: Crystal structure of the Helicobacter pylori CagA oncoprotein
Classification: ONCOPROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2012-02-23
Authors: Hayashi, T., Senda, M., Morohashi, H., Higashi, H., Horio, M., Kashiba, Y., Nagase, L., Sasaya, D., Shimizu, T., Venugopalan, N., Kumeta, H., Noda, N., Inagaki, F., Senda, T., Hatakeyama, M.
PDB entry 4dw0: Crystal structure of the ATP-gated P2X4 ion channel in the closed, apo state at 2.9 Angstroms
Classification: TRANSPORT PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2012-02-24
Authors: Hattori, M., Gouaux, E.
PDB entry 4dw1: Crystal structure of the ATP-gated P2X4 ion channel in the ATP-bound, open state at 2.8 Angstroms
Classification: TRANSPORT PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-02-24
Authors: Hattori, M., Gouaux, E.
PDB entry 4dw2: The crystal structure of uPA in complex with the Fab fragment of mAb-112
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.97 Å
Deposited: 2012-02-24
Authors: Jiang, L., Botkjaer, K.A., Andersen, L.M., Yuan, C., Andreasen, P.A., Huang, M.
PDB entry 4dw3: Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with 5'-CMP
Classification: VIRAL PROTEIN
Source organism: Bovine viral diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-02-24
Authors: Krey, T., Bontems, F., Vonrhein, C., Vaney, M.-C., Bricogne, G., Ruemenapf, T., Rey, F.A.
PDB entry 4dw4: Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with 5'-UMP
Classification: VIRAL PROTEIN
Source organism: Bovine viral diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2012-02-24
Authors: Krey, T., Bontems, F., Vonrhein, C., Vaney, M.-C., Bricogne, G., Ruemenapf, T., Rey, F.A.
PDB entry 4dw5: Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with a non-cleavable CpU dinucleotide
Classification: VIRAL PROTEIN
Source organism: Bovine viral diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2012-02-24
Authors: Krey, T., Bontems, F., Vonrhein, C., Vaney, M.-C., Bricogne, G., Ruemenapf, T., Rey, F.A.
PDB entry 4dw6: Novel N-phenyl-phenoxyacetamide derivatives as potential EthR inhibitors and ethionamide boosters. Discovery and optimization using High-Throughput Synthesis.
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-24
Authors: Flipo, M., Willand, N., Lecat-Guillet, N., Hounsou, C., Desroses, M., Leroux, F., Lens, Z., Villeret, V., Wohlkonig, A., Wintjens, R., Christophe, T., Jeon, H.K., Locht, C., Brodin, P., Baulard, A.R., Deprez, B.
PDB entry 4dw7: Crystal structure of an active-site mutant of the glycoprotein Erns from the pestivirus BVDV-1 in complex with a CpU dinucleotide
Classification: VIRAL PROTEIN/RNA
Source organism: Bovine viral diarrhea virus 1-CP7; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2012-02-24
Authors: Krey, T., Bontems, F., Vonrhein, C., Vaney, M.-C., Bricogne, G., Ruemenapf, T., Rey, F.A.
PDB entry 4dw8: Crystal structure of a haloacid dehalogenase-like hydrolase (Target EFI-900331) from Bacteroides thetaiotaomicron with bound Na crystal form I
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.502 Å
Deposited: 2012-02-24
Authors: Vetting, M.W., Wasserman, S.R., Morisco, L.L., Sojitra, S., Allen, K.N., Dunaway-Mariano, D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4dwa: Crystal structure of an active-site mutant of the glycoprotein Erns from the pestivirus BVDV-1 in complex with a CpUpC trinucleotide
Classification: VIRAL PROTEIN/RNA
Source organism: Bovine viral diarrhea virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2012-02-24
Authors: Krey, T., Bontems, F., Vonrhein, C., Vaney, M.-C., Bricogne, G., Ruemenapf, T., Rey, F.A.
PDB entry 4dwb: Crystal structure of Trypanosoma cruzi farnesyl diphosphate synthase in complex with [2-(n-pentylamino)ethane-1,1-diyl]bisphosphonic acid and Mg2+
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2012-02-24
Authors: Aripirala, S., Amzel, L.M., Gabelli, S.B.
PDB entry 4dwc: Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with Zn ions
Classification: VIRAL PROTEIN
Source organism: Bovine viral diarrhea virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2012-02-24
Authors: Krey, T., Bontems, F., Vonrhein, C., Vaney, M.-C., Bricogne, G., Ruemenapf, T., Rey, F.A.
PDB entry 4dwd: Crystal structure of mandelate racemase/muconate lactonizing protein from Paracoccus denitrificans PD1222 complexed with magnesium
Classification: METAL BINDING PROTEIN
Source organism: Paracoccus denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-02-24
Authors: Malashkevich, V.N., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4dwe: Crystal structure of a putative polysaccharide deacetylase (BACOVA_03992) from Bacteroides ovatus ATCC 8483 at 2.01 A resolution
Classification: Structural Genomics, Unknown Function
Source organism: Bacteroides ovatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2012-02-24
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4dwf: Crystal structure of a HLA-B associated transcript 3 (BAT3) from Homo sapiens at 1.80 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-24
Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
PDB entry 4dwg: Crystal structure of Trypanosome cruzi farnesyl diphosphate synthase in complex with [2-(n-heptylamino)ethane-1,1-diyl]bisphosphonic acid and Mg2+
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2012-02-24
Authors: Aripirala, S., Amzel, L.M., Gabelli, S.B.
PDB entry 4dwh: Structure of the major type 1 pilus subunit FIMA bound to the FIMC (2.5 A resolution)
Classification: STRUCTURAL PROTEIN/CHAPERONE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-02-24
Authors: Scharer, M.A., Puorger, C., Crespo, M., Glockshuber, R., Capitani, G.
PDB entry 4dwi: Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with self complementary DNA, Se-dGTP and Calcium
Classification: TRANSFERASE/DNA
Source organism: Geobacillus stearothermophilus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-02-24
Authors: Gan, J.H., Abdur, R., Liu, H.H., Sheng, J., Caton-Willians, J., Soares, A.S., Huang, Z.
PDB entry 4dwj: Crystal structure of Thymidylate Kinase from Staphylococcus aureus in complex with Thymidine Monophosphate
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2012-02-24
Authors: Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Jedrzejczak, R., Babnigg, G., Rubin, E., Sacchettini, J., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
PDB entry 4dwk: Structure of cystein free insulin degrading enzyme with compound bdm41671 ((s)-2-{2-[carboxymethyl-(3-phenyl-propyl)-amino]-acetylamino}-3-(1h-imidazol-4-yl)-propionic acid methyl ester)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2012-02-24
Authors: Guo, Q., Deprez-Poulain, R., Deprez, B., Tang, W.J.
PDB entry 4dwl: Avd molecule from Bordetella bacteriophage DGR
Classification: nucleic acid binding protein
Source organism: Bordetella phage BPP-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2012-02-24
Authors: Ghosh, P., Al-Ayyoubi, M.
PDB entry 4dwm: Crystal structure of the complex of type I Ribosome inactivating protein with N-acetylglucosamine at 1.62 A resolution
Classification: HYDROLASE
Source organism: Momordica balsamina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2012-02-25
Authors: Yamini, S., Pandey, S., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4dwn: Crystal Structure of Human BinCARD CARD
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.581 Å
Deposited: 2012-02-26
Authors: Chen, K.-E., Kobe, B., Martin, J.L.
PDB entry 4dwo: Crystal structure of a haloacid dehalogenase-like hydrolase (Target EFI-900331) from Bacteroides thetaiotaomicron with bound Mg crystal form II
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-02-26
Authors: Vetting, M.W., Wasserman, S.R., Morisco, L.L., Sojitra, S., Allen, K.N., Dunaway-Mariano, D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4dwp: SeMet protelomerase tela covalently complexed with substrate DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Agrobacterium tumefaciens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-02-26
Authors: Shi, K., Aihara, H.
PDB entry 4dwq: RNA ligase RtcB-GMP/Mn(2+) complex
Classification: LIGASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-02-26
Authors: Okada, C., Xia, S., Englert, M., Yao, M., Soll, D., Wang, J.
PDB entry 4dwr: RNA ligase RtcB/Mn2+ complex
Classification: LIGASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2012-02-26
Authors: Xia, S., Englert, M., Soll, D., Wang, J.
PDB entry 4dws: Crystal Structure of a chitinase from the Yersinia entomophaga toxin complex
Classification: SUGAR BINDING PROTEIN
Source organism: Yersinia entomophaga
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-26
Authors: Busby, J.N., Hurst, M.R.H., Lott, J.S.
PDB entry 4dwt: Carbonmonoxy dehaloperoxidase-hemoglobin A structure at 2.05 Angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2012-02-26
Authors: de Serrano, V.S., Zhao, J., Franzen, S.
PDB entry 4dwu: Carbonmonoxy dehaloperoxidase-hemoglobin A structure at 1.44 Angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2012-02-26
Authors: de Serrano, V.S., Zhao, J., Franzen, S.
PDB entry 4dwv: Horse alcohol dehydrogenase complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2012-02-26
Authors: Plapp, B.V., Ramaswamy, S.
PDB entry 4dww: Crystal Structure of Nattokinase from Bacillus subtilis natto
Classification: HYDROLASE
Source organism: Bacillus subtilis subsp. natto
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2012-02-27
Authors: Chatake, T., Yanagisawa, Y.
PDB entry 4dwx: Crystal Structure of a Family GH-19 Chitinase from rye seeds
Classification: HYDROLASE
Source organism: Secale cereale
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-27
Authors: Numata, T., Umemoto, N., Ohnuma, T., Fukamizo, T.
PDB entry 4dwy: Interactions of Mn2+ with a non-self-complementary Z-type DNA duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2012-02-27
Authors: Mandal, P.K., Venkadesh, S., Gautham, N.
PDB entry 4dwz: Crystal Structure of Ton_0340
Classification: METAL BINDING PROTEIN
Source organism: Thermococcus onnurineus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2012-02-27
Authors: Lee, S.G., Lee, K.H., Cha, S.S., Oh, B.H.
PDB entry 4dx0: Structure of the 14-3-3/PMA2 complex stabilized by a pyrazole derivative
Classification: PROTEIN BINDING/Hydrolase
Source organism: Nicotiana plumbaginifolia; Nicotiana tabacum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2012-02-27
Authors: Richter, A., Rose, R., Hedberg, C., Waldmann, H., Ottmann, C.
PDB entry 4dx1: Crystal structure of the human TRPV4 ankyrin repeat domain
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2012-02-27
Authors: Inada, H., Gaudet, R.
PDB entry 4dx2: Crystal structure of the human TRPV4 ankyrin repeat domain
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2012-02-27
Authors: Inada, H., Gaudet, R.
PDB entry 4dx3: Crystal structure of an enolase (mandelate racemase subgroup, target EFI-502086) from Agrobacterium tumefaciens, with a succinimide residue
Classification: ISOMERASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2012-02-27
Authors: Vetting, M.W., Bouvier, J.T., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4dx5: Transport of drugs by the multidrug transporter AcrB involves an access and a deep binding pocket that are separated by a switch-loop
Classification: MEMBRANE PROTEIN, TRANSPORT PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-02-27
Authors: Eicher, T., Cha, H., Seeger, M.A., Brandstaetter, L., El-Delik, J., Bohnert, J.A., Kern, W.V., Verrey, F., Gruetter, M.G., Diederichs, K., Pos, K.M.
PDB entry 4dx6: Transport of drugs by the multidrug transporter AcrB involves an access and a deep binding pocket that are separated by a switch-loop
Classification: MEMBRANE PROTEIN, TRANSPORT PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2012-02-27
Authors: Eicher, T., Cha, H., Seeger, M.A., Brandstaetter, L., El-Delik, J., Bohnert, J.A., Kern, W.V., Verrey, F., Gruetter, M.G., Diederichs, K., Pos, K.M.
PDB entry 4dx7: Transport of drugs by the multidrug transporter AcrB involves an access and a deep binding pocket that are separated by a switch-loop
Classification: MEMBRANE PROTEIN, TRANSPORT PROTEIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.253 Å
Deposited: 2012-02-27
Authors: Eicher, T., Cha, H., Seeger, M.A., Brandstaetter, L., El-Delik, J., Bohnert, J.A., Kern, W.V., Verrey, F., Gruetter, M.G., Diederichs, K., Pos, K.M.
PDB entry 4dx8: ICAP1 in complex with KRIT1 N-terminus
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2012-02-27
Authors: Liu, W., Draheim, K., Zhang, R., Calderwood, D.A., Boggon, T.J.
PDB entry 4dx9: ICAP1 in complex with integrin beta 1 cytoplasmic tail
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2012-02-27
Authors: Liu, W., Draheim, K., Zhang, R., Calderwood, D.A., Boggon, T.J.
PDB entry 4dxa: Co-crystal structure of Rap1 in complex with KRIT1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-02-27
Authors: Li, X., Zhang, R., Boggon, T.J.
PDB entry 4dxb: 2.29A structure of the engineered MBP TEM-1 fusion protein RG13 in complex with zinc, P1 space group
Classification: SUGAR BINDING PROTEIN, HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2012-02-27
Authors: van den Akker, F., Ke, W.
PDB entry 4dxc: Crystal structure of the engineered MBP TEM-1 fusion protein RG13, C2 space group
Classification: SUGAR BINDING PROTEIN, HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-02-27
Authors: van den Akker, F., Ke, W.
PDB entry 4dxd: Staphylococcal Aureus FtsZ in complex with 723
Classification: CELL CYCLE/INHIBITOR
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2012-02-27
Authors: Lu, J., Soisson, S.M.
PDB entry 4dxe: 2.52 Angstrom resolution crystal structure of the acyl-carrier-protein synthase (AcpS)-acyl carrier protein (ACP) protein-protein complex from Staphylococcus aureus subsp. aureus COL
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2012-02-27
Authors: Halavaty, A.S., Minasov, G., Filippova, E.V., Dubrovska, I., Winsor, J., Shuvalova, L., Peterson, S.N., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4dxf: Crystal structure of Staphylococcal Superantigen-Like protein 4
Classification: SUGAR BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-02-27
Authors: Hermans, S.J., Baker, H.M., Langley, R.J., Baker, E.N., Fraser, J.F.
PDB entry 4dxg: Crystal structure of Staphylococcal Superantigen-Like protein 4 complexed with sialyl Lewis X
Classification: SUGAR BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-02-27
Authors: Hermans, S.J., Baker, H.M., Langley, R.J., Baker, E.N., Fraser, J.F.
PDB entry 4dxh: Horse liver alcohol dehydrogenase complexed with NAD+ and 2,2,2-trifluoroethanol
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2012-02-27
Authors: Plapp, B.V., Ramaswamy, S.
PDB entry 4dxi: Crystal Structure of an Ancestor of All Faviina Proteins
Classification: LUMINESCENT PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-02-27
Authors: Kim, H., Wachter, R.M.
PDB entry 4dxj: Crystal structure of Trypanosome cruzi farnesyl diphosphate synthase in complex with [2-(n-propylamino)ethane-1,1-diyl]bisphosphonic acid and Mg2+
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-02-27
Authors: Aripirala, S., Amzel, L.M., Gabelli, S.B.
PDB entry 4dxk: Crystal structure of an enolase (mandelate racemase subgroup, target EFI-502086) from Agrobacterium tumefaciens, with a succinimide residue, na and phosphate
Classification: ISOMERASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2012-02-27
Authors: Vetting, M.W., Bouvier, J.T., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4dxl: Crystal structure of IspE (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase) from Mycobacterium abscessus, bound to CMP and ATP
Classification: TRANSFERASE
Source organism: Mycobacterium abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-27
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4dxm: Crystal Structure of an ancestral GFP-like protein
Classification: LUMINESCENT PROTEIN
Source organism: Synthetic Construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2012-02-27
Authors: Kim, H., Fromme, R., Wachter, R.M.
PDB entry 4dxn: Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, Least Evolved Ancestor (LEA)
Classification: LUMINESCENT PROTEIN
Source organism: Synthetic Construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-02-27
Authors: Kim, H., Fromme, R., Wachter, R.M.
PDB entry 4dxo: Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA X(6)
Classification: LUMINESCENT PROTEIN
Source organism: Synthetic Construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-02-27
Authors: Kim, H., Fromme, R., Wachter, R.M.
PDB entry 4dxp: Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA X121
Classification: LUMINESCENT PROTEIN
Source organism: Synthetic Construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-02-27
Authors: Kim, H., Fromme, R., Wachter, R.M.
PDB entry 4dxq: Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA Q38A
Classification: LUMINESCENT PROTEIN
Source organism: Synthetic Construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-02-27
Authors: Kim, H., Wachter, R.M.
PDB entry 4dxr: Human SUN2-KASH1 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2012-02-28
Authors: Sosa, B., Schwartz, T.U.
PDB entry 4dxs: Human SUN2-KASH2 complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2012-02-28
Authors: Sosa, B., Schwartz, T.U.
PDB entry 4dxt: Human SUN2 (AA 522-717)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2012-02-28
Authors: Sosa, B., Schwartz, T.U.
PDB entry 4dxu: Crystal Structure of C-lobe of Bovine lactoferrin Complexed with aminocaproic acid at 1.46 A Resolution
Classification: METAL BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2012-02-28
Authors: Shukla, P.K., Gautam, L., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4dxv: Crystal structure of Dihydrodipicolinate synthase from Acinetobacter baumannii complexed with Mg and Cl ions at 1.80 A resolution
Classification: LYASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-28
Authors: Kumar, M., Kaushik, S., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4dxw: Crystal structure of NavRh, a voltage-gated sodium channel
Classification: TRANSPORT PROTEIN
Source organism: alpha proteobacterium HIMB114
Experimental method: X-RAY DIFFRACTION
Resolution: 3.052 Å
Deposited: 2012-02-28
Authors: Zhang, X., Ren, W.L., Yan, C.Y., Wang, J.W., Yan, N.
PDB entry 4dxx: TGT K52M mutant crystallized at pH 8.5
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2012-02-28
Authors: Jakobi, S., Ritschel, T., Heine, A., Klebe, G.
PDB entry 4dxy: Crystal structures of CYP101D2 Y96A mutant
Classification: OXIDOREDUCTASE
Source organism: Novosphingobium aromaticivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-28
Authors: Zhou, W., Bell, S.G., Yang, W., Dale, A., Wong, L.-L.
PDB entry 4dxz: crystal structure of a PliG-Ec mutant, a periplasmic lysozyme inhibitor of g-type lysozyme from Escherichia coli
Classification: HYDROLASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2012-02-28
Authors: Leysen, S., Vanheuverzwijn, S., Van Asten, K., Vanderkelen, L., Michiels, C.W., Strelkov, S.V.
PDB entry 4dy0: Crystal structure of native protease nexin-1 with heparin
Classification: HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2012-02-28
Authors: Huntington, J.A., Li, W.
PDB entry 4dy1: tRNA-guanine transglycosylase F92C C158S C281S mutant
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.045 Å
Deposited: 2012-02-28
Authors: Jakobi, S., Heine, A., Klebe, G.
PDB entry 4dy3: crystal structure of Escherichia coli PliG, a periplasmic lysozyme inhibitor of g-type lysozyme
Classification: HORMONE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-28
Authors: Leysen, S., Vanheuverzwijn, S., Van Asten, K., Vanderkelen, L., Michiels, C.W., Strelkov, S.V.
PDB entry 4dy4: High resolution structure of E.coli WrbA with FMN
Classification: TRANSCRIPTION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2012-02-28
Authors: Kishko, I., Brynda, J., Kuta Smatanova, I., Ettrich, R., Carey, J.
PDB entry 4dy5: Crystal structure of Salmonella Typhimurium PliG, a periplasmic lysozyme inhibitor of g-type lysozyme
Classification: HYDROLASE INHIBITOR
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2012-02-28
Authors: Leysen, S., Theuwis, V., Vanderkelen, L., Michiels, C.W., Strelkov, S.V.
PDB entry 4dy6: Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with 2'-phosphate bis(adenosine)-5'-diphosphate
Classification: TRANSFERASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-02-28
Authors: Poncet-Montange, G., Assairi, L., Arold, S., Pochet, S., Labesse, G.
PDB entry 4dy7: Crystal structures of protease nexin-1 in complex with S195A thrombin
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-02-28
Authors: Huntington, J.A., Li, W.
PDB entry 4dy8: Interactions of Mn2+ with a non-self-complementary Z-type DNA duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2012-02-28
Authors: Mandal, P.K., Venkadesh, S., Gautham, N.
PDB entry 4dy9: Leishmania major Peroxidase is a Cytochrome c Peroxidase
Classification: ELECTRON TRANSPORT
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 2.082 Å
Deposited: 2012-02-28
Authors: Jasion, V.S., Poulos, T.L.
PDB entry 4dya: Crystal Structure of WSN/A Influenza Nucleoprotein with BMS-885986 Ligand Bound
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2012-02-28
Authors: Lewis, H.A., Baldwin, E.T., Steinbacher, S., Maskos, K., Mortl, M., Kiefersauer, R., Edavettal, S., McDonnell, P.A., Pearce, B.C., Langley, D.R.
PDB entry 4dyb: Crystal Structure of WSN/A Influenza Nucleoprotein with BMS-883559 Ligand Bound
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-02-28
Authors: Lewis, H.A., Baldwin, E.T., Steinbacher, S., Maskos, K., Mortl, M., Kiefersauer, R., Edavettal, S., McDonnell, P.A., Pearce, B.C., Langley, D.R.
PDB entry 4dyc: Crystal Structure of the terminase small subunit gp1 with D19R mutation of the bacterial virus sf6
Classification: VIRAL PROTEIN
Source organism: Salmonella phage HK620
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-02-28
Authors: Zhao, H., Tang, L.
PDB entry 4dyd: Substrate-directed dual catalysis of dicarbonyl compounds by diketoreductase
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baylyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2012-02-28
Authors: Lu, M., White, M.A., Huang, Y., Wu, X., Liu, N., Cheng, X., Chen, Y.
PDB entry 4dye: Crystal structure of an enolase (putative sugar isomerase, target efi-502095) from streptomyces coelicolor, no mg, ordered loop
Classification: ISOMERASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2012-02-28
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4dyg: Crystal Structure of a Family GH-19 Chitinase from rye seeds in complex with (GlcNAc)4
Classification: HYDROLASE
Source organism: Secale cereale
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-02-29
Authors: Numata, T., Umemoto, N., Ohnuma, T., Fukamizo, T.
PDB entry 4dyh: Crystal structure of glycosylated Lipase from Humicola lanuginosa at 2 Angstrom resolution
Classification: HYDROLASE
Source organism: Thermomyces lanuginosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-29
Authors: Singh, A., Mukherjee, J., Gupta, M.N., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 4dyj: Crystal structure of a broad specificity amino acid racemase (Bar) within internal aldimine linkage
Classification: ISOMERASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2012-02-29
Authors: Wang, W.C., Wu, H.M.
PDB entry 4dyk: Crystal structure of an adenosine deaminase from pseudomonas aeruginosa pao1 (target nysgrc-200449) with bound zn
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-02-29
Authors: Vetting, M.W., Toro, R., Bhosle, R., Wasserman, S.R., Morisco, L.L., Sojitra, S., Chamala, S., Kar, A., Lafleur, J., Villigas, G., Evans, B., Hammonds, J., Gizzi, A., Zencheck, W.D., Hillerich, B., Love, J., Seidel, R.D., Bonanno, J.B., Raushel, F.M., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4dyl: F-BAR domain of human FES tyrosine kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2012-02-29
Authors: Ugochukwu, E., Salah, E., Elkins, J., Barr, A., Krojer, T., Filippakopoulos, P., Weigelt, J., Arrowsmith, C.H., Edwards, A., Bountra, C., von Delft, F., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 4dym: Crystal structure of the ACVR1 kinase domain in complex with the imidazo[1,2-b]pyridazine inhibitor K00135
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2012-02-29
Authors: Chaikuad, A., Sanvitale, C., Cooper, C., Canning, P., Mahajan, P., Daga, N., Petrie, K., Alfano, I., Gileadi, O., Fedorov, O., Krojer, T., Filippakopoulos, P., Muniz, J.R.C., von Delft, F., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bullock, A., Structural Genomics Consortium (SGC)