LiteFold/PDB huggingface dataset:
PDB entry 7e1w: Cryo-EM structure of hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV in the presence of Q203
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium smegmatis MC2 51; Mycobacterium tuberculosis H37Rv; Mycolicibacterium smegmatis MC2 51
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2021-02-03
Authors: Zhou, S., Wang, W., Gao, Y., Gong, H., Rao, Z.
PDB entry 7e1x: Cryo-EM structure of hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV in presence of TB47
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium smegmatis MC2 51; Mycobacterium tuberculosis H37Rv; Mycolicibacterium smegmatis MC2 51
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2021-02-03
Authors: Zhou, S., Wang, W., Gao, Y., Gong, H., Rao, Z.
PDB entry 7e1y: Staphylothermus marinus amylopullulanase -SmApu
Classification: HYDROLASE
Source organism: Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-02-04
Authors: Li, D., Li, X., Woo, E.-J.
PDB entry 7e1z: Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2021-02-04
Authors: Guo, Y.Y., Zhang, Y.Y., Yan, R.H., Huang, B.D., Ye, F.F., Wu, L.S., Chi, X.M., Zhou, Q.
PDB entry 7e20: Cryo EM structure of a K+-bound Na+,K+-ATPase in the E2 state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2021-02-04
Authors: Guo, Y.Y., Zhang, Y.Y., Yan, R.H., Huang, B.D., Ye, F.F., Wu, L.S., Chi, X.M., Zhou, Q.
PDB entry 7e21: Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state with ATP-gamma-S
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-02-04
Authors: Guo, Y.Y., Zhang, Y.Y., Yan, R.H., Huang, B.D., Ye, F.F., Wu, L.S., Chi, X.M., Zhou, Q.
PDB entry 7e22: Crystal structure of two pericyclases catalyzing [4+2] cycloaddition
Classification: BIOSYNTHETIC PROTEIN
Source organism: Fusarium sp. (strain FN080326)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2021-02-04
Authors: Chi, C.B., Wang, Z.D.
PDB entry 7e23: SARS-CoV-2 spike in complex with the CA521 neutralizing antibody Fab (focused refinement on Fab-RBD)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2021-02-04
Authors: Liu, C., Song, D., Dou, C.
PDB entry 7e24: Crystal structure of SDR family NAD(P)-dependent oxidoreductase from Exiguobacterium
Classification: OXIDOREDUCTASE
Source organism: Exiguobacterium acetylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7203 Å
Deposited: 2021-02-04
Authors: Chen, L., Tang, J., Yuan, S.
PDB entry 7e25: Crystal structure of human FABP7 complexed with palmitic acid
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-02-04
Authors: Nam, K.H.
PDB entry 7e26: Structure of PfFNT in apo state
Classification: TRANSPORT PROTEIN
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2021-02-04
Authors: Yan, C.Y., Jiang, X., Deng, D., Peng, X., Wang, N., Zhu, A., Xu, H., Li, J.
PDB entry 7e27: Structure of PfFNT in complex with MMV007839
Classification: TRANSPORT PROTEIN
Source organism: Plasmodium falciparum 3D7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2021-02-04
Authors: Yan, C.Y., Jiang, X., Deng, D., Peng, X., Wang, N., Zhu, A., Xu, H., Li, J.
PDB entry 7e28: Crystal structure of SDR family NAD(P)-dependent oxidoreductase from Exiguobacterium
Classification: OXIDOREDUCTASE
Source organism: Exiguobacterium acetylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2021-02-05
Authors: Chen, L., Tang, J., Yuan, S.
PDB entry 7e29: Crystal Structure of Saccharomyces cerevisiae Ioc4 PWWP domain fused with MBP
Classification: GENE REGULATION
Source organism: Escherichia coli (strain K12); Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.303 Å
Deposited: 2021-02-05
Authors: Li, J., Smolle, M., Liang, H., Liu, Y.
PDB entry 7e2a: GDPD mutant from Pyrococcus furiosus DSM 3638
Classification: HYDROLASE
Source organism: Pyrococcus furiosus DSM 3638
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2021-02-05
Authors: Wang, Y.H., Wang, J., Wang, F.H.
PDB entry 7e2b: GDPD mutant complex from Pyrococcus furiosus DSM 3638
Classification: HYDROLASE
Source organism: Pyrococcus furiosus DSM 3638
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2021-02-05
Authors: Wang, Y.H., Wang, J., Wang, F.H.
PDB entry 7e2c: Monomer of TRAPPII (open)
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.18 Å
Deposited: 2021-02-05
Authors: Sui, S.F., Sun, S., Mi, C.C.
PDB entry 7e2d: Monomer of TRAPPII (Closed)
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2021-02-05
Authors: Sui, S.F., Sun, S., Mi, C.C.
PDB entry 7e2e: Crystal structure of the Estrogen-Related Receptor alpha (ERRalpha) ligand-binding domain (LBD) in complex with an agonist DS45500853 and a PGC-1alpha peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-02-05
Authors: Ito, S., Shinozuka, T., Kimura, T., Izumi, M., Wakabayashi, K.
PDB entry 7e2g: Cryo-EM structure of hDisp1NNN-3C
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2021-02-05
Authors: Li, W., Wang, L., Gong, X.
PDB entry 7e2h: Cryo-EM structure of hDisp1NNN-3C-Cleavage
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2021-02-05
Authors: Li, W., Wang, L., Gong, X.
PDB entry 7e2i: Cryo-EM structure of hDisp1NNN-ShhN
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2021-02-05
Authors: Li, W., Wang, L., Gong, X.
PDB entry 7e2k: Crystal structure of the RWD domain of human GCN2 - 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.041 Å
Deposited: 2021-02-05
Authors: Hei, Z., Zhou, J., Liu, Z., Wang, J., Fang, P.
PDB entry 7e2m: Crystal structure of the RWD domain of human GCN2 - 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-02-05
Authors: Hei, Z., Zhou, J., Liu, Z., Wang, J., Fang, P.
PDB entry 7e2o: X-ray Crystal structure of PPARgamma R288H mutant.
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-02-06
Authors: Egawa, D., Itoh, T.
PDB entry 7e2p: The Crystal Structure of Mycoplasma bovis enolase
Classification: LYASE
Source organism: Mycoplasma bovis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-02-07
Authors: Chen, R., Zhang, S., Gan, R., Wang, W., Ran, T., Shao, G., Xiong, Q., Feng, Z.
PDB entry 7e2q: Crystal structure of Mycoplasma pneumoniae Enolase
Classification: LYASE
Source organism: Mycoplasma pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-07
Authors: Chen, R., Zhang, S., Gan, R., Wang, W., Ran, T., Xiong, Q., Shao, G., Feng, Z.
PDB entry 7e2r: The ligand-free structure of Arabidopsis thaliana GUN4
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-07
Authors: Liu, L., Hu, J.
PDB entry 7e2s: Synechocystis GUN4 in complex with biliverdin IXa
Classification: SIGNALING PROTEIN
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2021-02-07
Authors: Liu, L., Hu, J.
PDB entry 7e2t: Synechocystis GUN4 in complex with phycocyanobilin
Classification: SIGNALING PROTEIN
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2021-02-07
Authors: Liu, L., Hu, J.
PDB entry 7e2u: Synechocystis GUN4 in complex with phytochrome
Classification: SIGNALING PROTEIN
Source organism: Synechocystis sp. (strain PCC 6803 / Kazusa)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2021-02-07
Authors: Liu, L., Hu, J.
PDB entry 7e2v: Crystal structure of MaDA-3
Classification: PLANT PROTEIN
Source organism: Morus alba
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2021-02-07
Authors: Gao, L., Du, X., Fan, J., Lei, X.
PDB entry 7e2w: Crystal structure of isocitrate dehydrogenase from Ostreococcus tauri in complex with isocitrate and magnesium(II)
Classification: OXIDOREDUCTASE
Source organism: Ostreococcus tauri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-07
Authors: Zhu, G.P., Tang, W.G., Wang, P.
PDB entry 7e2x: Apo serotonin 1A (5-HT1A) receptor-Gi protein complex
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-02-07
Authors: Xu, P., Huang, S., Zhang, H., Mao, C., Zhou, X.E., Shen, D.D., Jiang, Y., Zhang, Y., Xu, H.E.
PDB entry 7e2y: Serotonin-bound Serotonin 1A (5-HT1A) receptor-Gi protein complex
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-02-07
Authors: Xu, P., Huang, S., Zhang, H., Mao, C., Zhou, X.E., Shen, D.D., Jiang, Y., Zhang, Y., Xu, H.E.
PDB entry 7e2z: Aripiprazole-bound serotonin 1A (5-HT1A) receptor-Gi protein complex
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2021-02-07
Authors: Xu, P., Huang, S., Zhang, H., Mao, C., Zhou, X.E., Shen, D.D., Jiang, Y., Zhang, Y., Xu, H.E.
PDB entry 7e30: Crystal structure of a novel alpha/beta hydrolase in apo form in complex with citrate
Classification: HYDROLASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2021-02-07
Authors: Gao, J., Han, X., Zheng, Y.Y., Liu, W.D.
PDB entry 7e31: Crystal structure of a novel alpha/beta hydrolase mutant in apo form
Classification: HYDROLASE
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2021-02-07
Authors: Gao, J., Han, X., Zheng, Y.Y., Liu, W.D.
PDB entry 7e32: Serotonin 1D (5-HT1D) receptor-Gi protein complex
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-02-07
Authors: Xu, P., Huang, S., Zhang, H., Mao, C., Zhou, X.E., Shen, D.D., Jiang, Y., Zhang, Y., Xu, H.E.
PDB entry 7e33: Serotonin 1E (5-HT1E) receptor-Gi protein complex
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2021-02-07
Authors: Xu, P., Huang, S., Zhang, H., Mao, C., Zhou, X.E., Shen, D.D., Jiang, Y., Zhang, Y., Xu, H.E.
PDB entry 7e34: Crystal structure of SUN1-Speedy A-CDK2
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2021-02-08
Authors: Chen, Y., Huang, C., Wu, J., Lei, M.
PDB entry 7e35: Crystal structure of the SARS-CoV-2 papain-like protease (PLPro) C112S mutant bound to compound S43
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-02-08
Authors: Liu, J., Wang, Y., Xu, X., Pan, L.
PDB entry 7e36: A [6+4]-cycloaddition adduct is the biosynthetic intermediate in streptoseomycin biosynthesis
Classification: OXIDOREDUCTASE
Source organism: Nocardia tenerifensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-02-08
Authors: Zhang, B., Ge, H.M.
PDB entry 7e37: Crystal structure of deoxypodophyllotoxin synthase from Sinopodophyllum hexandrum in complex with 2-oxoglutarate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Sinopodophyllum hexandrum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2021-02-08
Authors: Wu, M.-H., Lin, H.-Y., Chang, W.-c., Chien, T.-C., Chan, N.-L.
PDB entry 7e38: Crystal structure of deoxypodophyllotoxin synthase from Sinopodophyllum hexandrum in complex with yatein and succinate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Sinopodophyllum hexandrum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-02-08
Authors: Wu, M.-H., Chang, W.-c., Chien, T.-C., Chan, N.-L.
PDB entry 7e39: SARS-CoV-2 spike in complex with the Ab4 neutralizing antibody (State 3)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2021-02-08
Authors: Liu, C.
PDB entry 7e3b: SARS-Cov-2 spike in complex with the Ab5 neutralizing antibody (focused refinement on Fab-RBD)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2021-02-08
Authors: Liu, C.
PDB entry 7e3c: SARS-CoV-2 spike in complex with the Ab1 neutralizing antibody (focused refinement on Fab-RBD)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2021-02-08
Authors: Liu, C.
PDB entry 7e3d: Crystal structure of human acetylcholinesterase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-08
Authors: Dileep, K.V., Ihara, K., Mishima-Tsumagari, C., Kukimoto-Niino, M., Yonemochi, M., Hanada, K., Shirouzu, M., Zhang, K.Y.J.
PDB entry 7e3e: Crystal structure of Trypanosoma brucei cathepsin B R91C/T223C mutant
Classification: HYDROLASE
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-08
Authors: Abe, S., Pham, T.T., Negishi, H., Yamashita, K., Hirata, K., Ueno, T.
PDB entry 7e3f: Crystal structure of Trypanosoma brucei cathepsin B Y217C/S275C mutant
Classification: HYDROLASE
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2021-02-08
Authors: Abe, S., Pham, T.T., Negishi, H., Yamashita, K., Hirata, K., Ueno, T.
PDB entry 7e3g: Crystal structure of Trypanosoma brucei cathepsin B R91C/T223C mutant in the living cell
Classification: HYDROLASE
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.86 Å
Deposited: 2021-02-08
Authors: Abe, S., Pham, T.T., Negishi, H., Yamashita, K., Hirata, K., Ueno, T.
PDB entry 7e3h: Crystal structure of human acetylcholinesterase in complex with donepezil
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2021-02-08
Authors: Dileep, K.V., Ihara, K., Mishima-Tsumagari, C., Kukimoto-Niino, M., Yonemochi, M., Hanada, K., Shirouzu, M., Zhang, K.Y.J.
PDB entry 7e3j: Crystal structure of SARS-CoV-2 RBD binding to dog ACE2
Classification: VIRAL PROTEIN
Source organism: Canis lupus familiaris; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2021-02-08
Authors: Zhang, Z., Zhang, Y.
PDB entry 7e3k: Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2021-02-09
Authors: Guo, H., Li, T., Liu, F., Gao, Y., Ji, X., Yang, H.
PDB entry 7e3l: Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-02-09
Authors: Guo, H., Li, T., Liu, F., Gao, Y., Ji, X., Yang, H.
PDB entry 7e3m: RORgamma LBD complexed with Panaxatriol and SRC2.2
Classification: IMMUNE SYSTEM/INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-02-09
Authors: Liu, Z.H., Huang, J., Lu, W.Q., Tang, Y., Wu, Z.R.
PDB entry 7e3n: Crystal structure of Isocitrate dehydrogenase D252N mutant from Trypanosoma brucei in complexed with NADP+, alpha-ketoglutarate, and ca2+
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-02-09
Authors: Arai, N., Shiba, T., Inaoka, D.K., Kita, K., Wang, X., Otani, M., Matsushiro, S., Kojima, C.
PDB entry 7e3o: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody nCoV617
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2021-02-09
Authors: Chen, S.D., Yang, M.
PDB entry 7e3q: Crystal structure of SAH bound TrmL from Vibrio vulnificus
Classification: TRANSFERASE
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-02-09
Authors: Kim, J., Son, J.
PDB entry 7e3r: Crystal structure of TrmL from Vibrio vulnificus
Classification: TRANSFERASE
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2021-02-09
Authors: Kim, J., Son, J.
PDB entry 7e3s: Crystal structure of TrmL from Shewanella oneidensis
Classification: TRANSFERASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-09
Authors: Kim, J., Son, J.
PDB entry 7e3t: Crystal structure of TrmL from Mycoplasma capricolum
Classification: TRANSFERASE
Source organism: Mycoplasma capricolum subsp. capricolum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-09
Authors: Kim, J., Son, J.
PDB entry 7e3u: Crystal structure of the Pseudomonas aeruginosa dihydropyrimidinase complexed with 5-AU
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.159 Å
Deposited: 2021-02-09
Authors: Yang, Y.C., Luo, R.H., Huang, Y.H., Huang, C.Y., Lin, E.S.
PDB entry 7e3v: Metallo beta-lactamase fold protein (cAMP free)
Classification: METAL BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2021-02-09
Authors: Lee, K.-Y., Kim, D.-G., Lee, B.-J.
PDB entry 7e3w: Metallo beta-lactamase fold protein (cAMP bound)
Classification: METAL BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2021-02-09
Authors: Lee, K.-Y., Kim, D.-G., Lee, B.-J.
PDB entry 7e3x: Crystal structure of SDR family NAD(P)-dependent oxidoreductase from exiguobacterium
Classification: OXIDOREDUCTASE
Source organism: Exiguobacterium sp. KKBO11
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2021-02-09
Authors: Chen, L., Tang, J., Yuan, S., Zhang, F., Chen, S.
PDB entry 7e3y: Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with cysteine
Classification: TRANSFERASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-02-09
Authors: Momitani, K., Shiba, T., Sawa, T., Ono, K., Hurukawa, S.
PDB entry 7e3z: Non-Ribosomal Peptide Synthetases, Thioesterase
Classification: HYDROLASE
Source organism: Streptomyces sp. SNM55
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2021-02-09
Authors: Jung, Y.E., Cha, S.S.
PDB entry 7e40: Mechanism of Phosphate Sensing and Signaling Revealed by Rice SPX1-PHR2 Complex Structure
Classification: PROTEIN BINDING
Source organism: Enterobacteria phage T4; Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-02-09
Authors: Zhou, J., Hu, Q., Yao, D., Xing, W.
PDB entry 7e42: Solution strucutre of holo acyl carrier protein from Acinetobacter baumannii
Classification: BIOSYNTHETIC PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: SOLUTION NMR
Deposited: 2021-02-10
Authors: Choi, S., Park, J., Kim, Y.
PDB entry 7e43: Structural insights into a bifunctional peptide methionine sulfoxide reductase MsrA/B fusion protein from Helicobacter pylori
Classification: OXIDOREDUCTASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-02-10
Authors: Kim, S., Lee, K., Hwang, K.Y.
PDB entry 7e44: Crystal structure of NudC complexed with dpCoA
Classification: HYDROLASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2021-02-10
Authors: Zhou, W., Guan, Z.Y., Yin, P., Zhang, D.L.
PDB entry 7e45: Crystal structure of compound 7 bound to MIF
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.433 Å
Deposited: 2021-02-10
Authors: Fan, C.P., Yang, L.
PDB entry 7e46: Structure of the CYP102A1 Haem Domain with N-Carboxybenzyl-L-Prolyl-L-Phenylalanine in complex with (S)-(-)-1-Phenylethylamine
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2021-02-10
Authors: Stanfield, J.K., Sugimoto, H., Shoji, O.
PDB entry 7e47: Crystal structure of compound 6 bound to MIF
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2021-02-10
Authors: Fan, C.P., Yang, L., Guo, D.Y.
PDB entry 7e48: Crystal structure of InhA in complex with 3-nitropropanoic acid inhibitor
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-10
Authors: Songsiriritthigul, C., Hanwarinroj, C., Suttipanta, N., Kamsri, P., Kittakoop, P., Pungpo, P.
PDB entry 7e49: Crystal structure of MIF bound to compound10
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.574 Å
Deposited: 2021-02-11
Authors: Fan, C.P., Guo, D.Y., Yang, L.
PDB entry 7e4a: Crystal structure of MIF bound to compound 13
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.475 Å
Deposited: 2021-02-11
Authors: Fa, C.P., Guo, D.Y., Yang, L.
PDB entry 7e4b: Crystal structure of MIF bound to compound 5
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.772 Å
Deposited: 2021-02-11
Authors: Fan, C.P., Guo, D.Y., Yang, L.
PDB entry 7e4c: Crystal structure of MIF bound to compound11
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.644 Å
Deposited: 2021-02-11
Authors: Fan, C.P., Guo, D.Y., Yang, L.
PDB entry 7e4d: Crystal structure of PlDBR
Classification: OXIDOREDUCTASE
Source organism: Parvibaculum lavamentivorans DS-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-02-11
Authors: Sugimoto, K., Senda, M., Senda, T.
PDB entry 7e4e: NMR solution structures of DNA minidumbbell containing a N1-methyladenine
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2021-02-11
Authors: Wan, L., Guo, P., Lam, S.L.
PDB entry 7e4f: Mycobacterium tuberculosis enolase mutant - E204A complex with phosphoenolpyruvate
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2021-02-11
Authors: Ahmad, M., Pal, R.K., Biswal, B.K.
PDB entry 7e4g: Crystal structure of schizorhodopsin 4
Classification: MEMBRANE PROTEIN
Source organism: Asgard group archaeon
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-12
Authors: Shihoya, W., Nureki, O.
PDB entry 7e4h: Cryo-EM structure of the yeast mitochondrial SAM-Tom40 complex at 3.0 angstrom
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae S288c
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2021-02-13
Authors: Wang, Q., Guan, Z.Y., Qi, L.B., Yan, C.Y., Yin, P.
PDB entry 7e4i: Cryo-EM structure of the yeast mitochondrial SAM-Tom40/Tom5/Tom6 complex at 3.0 angstrom
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae S288c
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2021-02-13
Authors: Wang, Q., Guan, Z.Y., Qi, L.B., Yan, C.Y., Yin, P.
PDB entry 7e4j: X-ray crystal structure of VapB12 antitoxin from mycobacterium tuberculosis in space group P41.
Classification: ANTITOXIN
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2021-02-13
Authors: Pratap, S., Megta, A.K., Talwar, S., Chandresh, S., Pandey, A.K., Krishnan, V.
PDB entry 7e4k: WNV envelope protein
Classification: VIRAL PROTEIN
Source organism: West Nile virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2021-02-13
Authors: Xiao, H., Qi, J., Huang, C., Song, J., Cheng, H.
PDB entry 7e4l: Conversion of pyrophosphate-dependent myo-inositol-1 kinase into myo-inositol-3 kinase by N78L/S89L mutation
Classification: TRANSFERASE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-02-14
Authors: Tashiro, R., Miki, K., Fujihashi, M.
PDB entry 7e4m: Class I Pimarane-Type Diterpene Synthases Stt4548
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2021-02-14
Authors: Yu, J.H., Xing, B.Y., Ma, M.
PDB entry 7e4n: Crystal structure of Sat1646
Classification: BIOSYNTHETIC PROTEIN
Source organism: Salinispora
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2021-02-14
Authors: Yu, J.H., Xing, B.Y., Ma, M.
PDB entry 7e4o: Class I Pimarane-Type Diterpene Synthases from Actinomycetes
Classification: BIOSYNTHETIC PROTEIN
Source organism: Salinispora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-14
Authors: Yu, J.H., Xing, B.Y., Ma, M.
PDB entry 7e4p: Crystal structure of tubulin in complex with Ansamitocin P3
Classification: STRUCTURAL PROTEIN/INHIBITOR
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-02-14
Authors: Wang, Y., Li, W.
PDB entry 7e4q: Crystal structure of tubulin in complex with L-DM1-SMe
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2021-02-14
Authors: Wang, Y., Li, W.
PDB entry 7e4r: Crystal structure of tubulin in complex with D-DM1-SMe
Classification: STRUCTURAL PROTEIN/INHIBITOR
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.597 Å
Deposited: 2021-02-15
Authors: Wang, Y., Li, W.
PDB entry 7e4s: Crystal structure of Lactobacillus rhamnosus 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI complexed with HEPES
Classification: ISOMERASE
Source organism: Lactobacillus rhamnosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2021-02-15
Authors: Yamamoto, Y., Takase, R., Mikami, B., Hashimoto, W.
PDB entry 7e4t: Human TRPC5 apo state structure at 3 angstrom
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2021-02-15
Authors: Chen, L., Song, K., Wei, M., Guo, W.
PDB entry 7e4u: Crystal structure of Peroxiredoxin-1
Classification: OXIDOREDUCTASE
Source organism: Sparus aurata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-02-15
Authors: Ahmed, S., Mok, Y.K., Jobichen, C.
PDB entry 7e4v: Crystal structure of mosquito Staufen dsRNA binding domain 4
Classification: RNA BINDING PROTEIN
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2021-02-15
Authors: Gayathiri, S.K., Jobichen, C., Mok, Y.K.
PDB entry 7e4w: Human Transcriptional Co-activator PC4 (C-terminal Domain) in space group P1211
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-02-15
Authors: Dev, A., Pandey, B., Basu, G.
PDB entry 7e4x: Structure of Enolase from Mycobacterium tuberculosis
Classification: METAL BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2021-02-15
Authors: Bose, S., Vinothkumar, K.R.
PDB entry 7e4y: Crystal structure of tubulin in complex with L-DM4-SMe
Classification: STRUCTURAL PROTEIN/INHIBITOR
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.708 Å
Deposited: 2021-02-16
Authors: Wang, Y., Li, W.
PDB entry 7e4z: Crystal structure of tubulin in complex with Maytansinol
Classification: STRUCTURAL PROTEIN/INHIBITOR
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2021-02-16
Authors: Wang, Y., Li, W.
PDB entry 7e50: Crystal structure of human microplasmin in complex with kazal-type inhibitor AaTI
Classification: HYDROLASE
Source organism: Aedes aegypti; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-16
Authors: Varsha, A.W., Jobichen, C., Mok, Y.K.
PDB entry 7e51: Structure of PEP bound Enolase from Mycobacterium tuberculosis
Classification: METAL BINDING PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2021-02-16
Authors: Bose, S., Vinothkumar, K.R.
PDB entry 7e52: Acinetobacter baumannii Thioredoxin reductase
Classification: STRUCTURAL PROTEIN
Source organism: Acinetobacter baumannii 940793
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-02-16
Authors: Park, H.H., Chun, H.L.
PDB entry 7e53: Crystal structure of sfGFP complexed with the nanobody nb2 at 2.2 Angstron resolution
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria; Camelus bactrianus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2021-02-16
Authors: Ding, Y., Zhong, P.Y.
PDB entry 7e55: Cryo-EM structure of alpha 7 homo-tetradecamer
Classification: LYASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.9 Å
Deposited: 2021-02-17
Authors: Song, C., Murata, K.
PDB entry 7e56: The mutant crystal structure of endo-polygalacturonase (T316C/G344C) from Talaromyces leycettanus JCM 12802
Classification: HYDROLASE
Source organism: [Talaromyces] leycettanus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2021-02-17
Authors: Tu, T., Luo, H., Yao, B.
PDB entry 7e57: Crystal structure of murine GITR-GITRL complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.302 Å
Deposited: 2021-02-18
Authors: Zhao, M., Tan, S., Fu, L., Chai, Y., Qi, J., Gao, G.F.
PDB entry 7e58: interferon-inducible anti-viral protein 2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2021-02-18
Authors: Cui, W., Wang, W., Chen, C., Slater, B., Xiong, Y., Ji, X.Y., Yang, H.T.
PDB entry 7e59: interferon-inducible anti-viral protein truncated
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2021-02-18
Authors: Cui, W., Wang, W., Chen, C., Slater, B., Xiong, Y., Ji, X.Y., Yang, H.T.
PDB entry 7e5a: interferon-inducible anti-viral protein R356A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-18
Authors: Cui, W., Wang, W., Chen, C., Slater, B., Xiong, Y., Ji, X.Y., Yang, H.T.
PDB entry 7e5b: Crystal structure of ASC PYD Domain and Rb-B7
Classification: PROTEIN BINDING
Source organism: Cyclostomata; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2021-02-18
Authors: Cho, H.S., Cha, J.S.
PDB entry 7e5c: Bacterial prolidase mutant D45W/L225Y/H226L/H343I
Classification: HYDROLASE
Source organism: Pseudoalteromonas lipolytica SCSIO 04301
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2021-02-18
Authors: Yang, J.
PDB entry 7e5e: Crystal structure of GDP-bound GNAS in complex with the cyclic peptide inhibitor GD20
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2021-02-18
Authors: Hu, Q., Dai, S., Shokat, K.M.
PDB entry 7e5f: HUMAN PPAR ALPHA LIGAND BINDING DOMAIN IN COMPLEX WITH TIPP703 OBTAINED BY SOAKING
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2021-02-18
Authors: Oyama, T., Kamata, S., Ishii, I., Miyachi, H.
PDB entry 7e5g: HUMAN PPAR ALPHA LIGAND BINDING DOMAIN IN COMPLEX WITH YN4pai OBTAINED BY SOAKING
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2021-02-18
Authors: Oyama, T., Kamata, S., Ishii, I., Miyachi, H.
PDB entry 7e5h: HUMAN PPAR ALPHA LIGAND BINDING DOMAIN IN COMPLEX WITH APHM6 OBTAINED BY COCRYSTALLIZATION
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2021-02-18
Authors: Oyama, T., Kamata, S., Ishii, I., Miyachi, H.
PDB entry 7e5i: HUMAN PPAR ALPHA LIGAND BINDING DOMAIN IN COMPLEX WITH APHM6 OBTAINED BY SOAKING
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2021-02-18
Authors: Oyama, T., Kamata, S., Ishii, I., Miyachi, H.
PDB entry 7e5j: Crystal structure of beta-glucosidase from Thermoanaerobacterium saccharolyticum
Classification: HYDROLASE
Source organism: Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2021-02-18
Authors: Nam, K.H.
PDB entry 7e5m: crystal structure of trans assembled human TROP-2
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-02-19
Authors: Sun, M., Zhang, H., Chai, Y., Qi, J., Gao, G.F., Tan, S.
PDB entry 7e5n: crystal structure of cis assembled TROP-2
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2021-02-19
Authors: Sun, M., Zhang, H., Chai, Y., Qi, J., Gao, G.F., Tan, S.
PDB entry 7e5o: Crystal structure of SARS-CoV-2 RBD in complex with antibody NT-193
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2021-02-19
Authors: Kita, S., Onodera, T., Adachi, Y., Moriayma, S., Nomura, T., Tadokoro, T., Anraku, Y., Yumoto, K., Tian, C., Fukuhara, H., Suzuki, T., Tonouchi, K., Sasaki, J., Sun, L., Hashiguchi, T., Takahashi, Y., Maenaka, K.
PDB entry 7e5p: Aptamer enhancing peroxidase activity of myoglobin
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2021-02-19
Authors: Tsukakoshi, K., Matsugami, A., Khunathai, K., Kanazashi, M., Yamagishi, Y., Nakama, K., Oshikawa, D., Hayashi, F., Kuno, H., Ikebukuro, K.
PDB entry 7e5q: Crystal Structure of Dye Decolorizing peroxidase from Bacillus subtilis at acidic pH
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-02-19
Authors: Dhankhar, P., Dalal, V., Kumar, P.
PDB entry 7e5r: SARS-CoV-2 S trimer with three-antibody cocktail complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-02-20
Authors: Sun, Y., Wang, L., Wang, N., Feng, R., Wang, X.
PDB entry 7e5s: SARS-CoV-2 S trimer with four-antibody cocktail complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-02-20
Authors: Sun, Y., Wang, L., Wang, N., Feng, R., Wang, X.
PDB entry 7e5t: Crystal structure of Fsa2
Classification: BIOSYNTHETIC PROTEIN
Source organism: Fusarium sp. (strain FN080326)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16978 Å
Deposited: 2021-02-20
Authors: Fujiyama, K., Kato, N., Kinugasa, K., Hino, T., Takahashi, S., Nagano, S.
PDB entry 7e5u: Crystal structure of Phm7
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pyrenochaetopsis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2021-02-20
Authors: Fujiyama, K., Kato, N., Kinugasa, K., Hino, T., Takahashi, S., Nagano, S.
PDB entry 7e5v: Crystal structure of Phm7 in complex with inhibitor
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pyrenochaetopsis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2021-02-20
Authors: Fujiyama, K., Kato, N., Kinugasa, K., Hino, T., Takahashi, S., Nagano, S.
PDB entry 7e5w: The structure of CcpA from Staphylococcus aureus
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus (strain N315)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2021-02-20
Authors: Yu, G., Wei, X.
PDB entry 7e5x: THE CRYSTAL STRUCTURE OF COVID-19 MAIN PROTEASE apo form at 2.2 angstrom
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2021-02-21
Authors: Liu, X., Zhao, Y., Yang, H., Rao, Z.
PDB entry 7e5y: Molecular basis for neutralizing antibody 2B11 targeting SARS-CoV-2 RBD
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.59 Å
Deposited: 2021-02-21
Authors: Wu, H., Yu, F., Wang, Q.S., Zhou, H., Wang, W.W., Zhao, T., Pan, Y.B., Yang, X.M.
PDB entry 7e5z: Dehydrogenase holoenzyme
Classification: OXIDOREDUCTASE
Source organism: Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2021-02-21
Authors: Roh, S.H., Park, J.S., Heo, Y.Y.
PDB entry 7e60: The crystal structure of peptidoglycan peptidase in complex with inhibitor 1
Classification: HYDROLASE/INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2021-02-21
Authors: Min, K., Yoon, H.J., Choi, Y., Lee, H.H.
PDB entry 7e61: The crystal structure of peptidoglycan peptidase in complex with inhibitor 2
Classification: HYDROLASE/INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2021-02-21
Authors: Min, K.J., Yoon, H.J., Choi, Y., Lee, H.H.
PDB entry 7e62: Mouse TAB2 NZF in complex with Lys6-linked diubiquitin
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2021-02-21
Authors: Sato, Y., Li, Y., Okatsu, K., Fukai, S.
PDB entry 7e63: The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-1
Classification: HYDROLASE/INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2021-02-21
Authors: Choi, Y., Min, K.J., Yoon, H.J., Lee, H.H.
PDB entry 7e64: The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-2
Classification: HYDROLASE/INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2021-02-21
Authors: Choi, Y., Min, K.J., Yoon, H.J., Lee, H.H.
PDB entry 7e65: The crystal structure of peptidoglycan peptidase in complex with inhibitor 3
Classification: HYDROLASE/INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2021-02-21
Authors: Choi, Y., Min, K.J., Yoon, H.J., Lee, H.H.
PDB entry 7e66: The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-1
Classification: HYDROLASE/INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2021-02-21
Authors: Choi, Y., Min, K.J., Yoon, H.J., Lee, H.H.
PDB entry 7e67: The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-2
Classification: HYDROLASE/INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2021-02-21
Authors: Choi, Y., Min, K.J., Yoon, H.J., Lee, H.H.
PDB entry 7e69: The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-3
Classification: HYDROLASE/INHIBITOR
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2021-02-21
Authors: Choi, Y., Min, K.J., Yoon, H.J., Lee, H.H.
PDB entry 7e6a: Crystal structure of cysteine desulfurase SufS C361A from Bacillus subtilis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2021-02-22
Authors: Nakamura, R., Takahashi, Y., Fujishiro, T.
PDB entry 7e6b: Crystal structure of PMP-bound form of cysteine desulfurase SufS C361A from Bacillus subtilis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2021-02-22
Authors: Nakamura, R., Takahashi, Y., Fujishiro, T.
PDB entry 7e6c: Crystal structure of L-cycloserine-bound form of cysteine desulfurase SufS C361A from Bacillus subtilis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2021-02-22
Authors: Nakamura, R., Takahashi, Y., Fujishiro, T.
PDB entry 7e6d: Crystal structure of cysteine desulfurase SufS R376A from Bacillus subtilis
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2021-02-22
Authors: Nakamura, R., Takahashi, Y., Fujishiro, T.
PDB entry 7e6e: Crystal structure of PMP-bound form of cysteine desulfurase SufS R376A from Bacillus subtilis in D-cycloserine-inhibition
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2021-02-22
Authors: Nakamura, R., Takahashi, Y., Fujishiro, T.
PDB entry 7e6f: Crystal structure of PMP-bound form of cysteine desulfurase SufS R376A from Bacillus subtilis in L-cycloserine-inhibition
Classification: BIOSYNTHETIC PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2021-02-22
Authors: Nakamura, R., Takahashi, Y., Fujishiro, T.
PDB entry 7e6g: Crystal structure of diguanylate cyclase SiaD in complex with its activator SiaC from Pseudomonas aeruginosa
Classification: DE NOVO PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2021-02-22
Authors: Zhou, J.S., Zhang, L., Zhang, L.
PDB entry 7e6h: glucose-6-phosphate dehydrogenase from Kluyveromyces lactis
Classification: OXIDOREDUCTASE
Source organism: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2021-02-22
Authors: Ha, V.H., Chang, J.H.
PDB entry 7e6i: Glucose-6-phosphate dehydrogenase in complex with its substrate glucose-6-phosphate
Classification: OXIDOREDUCTASE
Source organism: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2021-02-22
Authors: Vu, H.H., Chang, J.H.
PDB entry 7e6j: Aspartyl/Asparaginyl beta-hydroxylase (AspH) H725A in complex with Factor X peptide fragment (39mer-4Ser)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-02-22
Authors: Nakashima, Y., Brasnett, A., Brewitz, L., Schofield, C.J.
PDB entry 7e6k: Viral protease
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2021-02-22
Authors: Zhao, Y., Zhang, Q., Yang, H.T., Rao, Z.H.
PDB entry 7e6l: Crystal structure of HCoV-NL63 3C-like protease,pH5.0
Classification: VIRAL PROTEIN
Source organism: Human coronavirus NL63
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78037 Å
Deposited: 2021-02-22
Authors: Gao, H.X., Zhang, Y.T., Zhou, X.L., Zhong, F.L., Li, J., Zhang, J.
PDB entry 7e6m: Crystal structure of Human coronavirus NL63 3C-like protease
Classification: VIRAL PROTEIN
Source organism: Human coronavirus NL63
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83445 Å
Deposited: 2021-02-22
Authors: Gao, H.X., Zhang, Y.T., Zhong, F.L., Zhou, X.L., Li, J., Zhang, J.
PDB entry 7e6n: Crystal structure of HCoV-NL63 3C-like protease,pH5.2
Classification: VIRAL PROTEIN
Source organism: Human coronavirus NL63
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8413 Å
Deposited: 2021-02-22
Authors: Gao, H.X., Zhang, Y.T., Zhou, X.L., Zhong, F.L., Li, J., Zhang, J.
PDB entry 7e6o: Crystal structure of polyol dehydrogenase from Paracoccus denitrificans
Classification: OXIDOREDUCTASE
Source organism: Paracoccus denitrificans (strain Pd 1222)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2021-02-22
Authors: Sha, F., Zheng, Y.C.
PDB entry 7e6p: Fab-amyloid beta fragment complex
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2021-02-23
Authors: Kita, A., Irie, K., Irie, Y., Miki, K.
PDB entry 7e6q: Crystal structure of influenza A virus neuraminidase N5 complexed with 4'-phenyl-1,2,3-triazolylated oseltamivir carboxylate
Classification: HYDROLASE
Source organism: Influenza A virus (strain A/Duck/Alberta/60/1976 H12N5)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2021-02-23
Authors: Wang, P.F., Babayemi, O.O., Li, C.N., Fu, L.F., Zhang, S.S., Qi, J.X., Lv, X., Li, X.B.
PDB entry 7e6r: Crystal structure of HCoV-NL63 3C-like protease,pH5.6
Classification: VIRAL PROTEIN
Source organism: Human coronavirus NL63
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2021-02-23
Authors: Gao, H.X., Zhang, Y.T., Zhong, F.L., Zhou, X.L., Li, J., Zhang, J.