LiteFold/PDB huggingface dataset:
PDB entry 5e3v: Truncated X-ray crystal structure of Adenylosuccinate Lyase from Salmonella typhimurium
Classification: LYASE
Source organism: Salmonella typhimurium (strain 14028s / SGSC 2262)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2015-10-04
Authors: Banerjee, S., Agrawal, M.J., Murthy, M.R.N.
PDB entry 5e3x: Crystal structure of thermostable Carboxypeptidase (FisCP) from Fervidobacterium Islandicum AW-1
Classification: HYDROLASE
Source organism: Fervidobacterium islandicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.197 Å
Deposited: 2015-10-05
Authors: Dhanasingh, I., Lee, Y.-J., Lee, D.W., Lee, S.H.
PDB entry 5e40: 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis with D-tyrosine bound in the phenylalanine binding site
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-10-05
Authors: Reichau, S., Jiao, W., Parker, E.J.
PDB entry 5e41: Crystal structure of the large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with 5-(N-(10-hydroxydecanoyl)-aminopentenyl)-2'-deoxyuridine-triphosphate
Classification: TRANSFERASE
Source organism: Thermus aquaticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-10-05
Authors: Hottin, A., Betz, K., Marx, A.
PDB entry 5e43: Crystal Structure of Beta-lactamase Sros_5706 from Streptosporangium roseum
Classification: HYDROLASE
Source organism: Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7095 Å
Deposited: 2015-10-05
Authors: Kim, Y., Hatzos-Skintges, C., Endres, M., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 5e44: Crystal structure of holo-FNR of A. fischeri
Classification: TRANSCRIPTION
Source organism: Aliivibrio fischeri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-10-05
Authors: Volbeda, A., Fontecilla-Camps, J.C.
PDB entry 5e46: Hydroxynitrile lyase from the fern Davallia tyermanii
Classification: LYASE
Source organism: Davallia tyermannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.854 Å
Deposited: 2015-10-05
Authors: Pavkov-Keller, T., Diepold, M., Gruber, K.
PDB entry 5e4a: Human transthyretin (TTR) complexed with (2,7-Dichloro-fluoren-9-ylideneaminooxy)-acetic acid.
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2015-10-05
Authors: Ciccone, L., Nencetti, S., Rossello, A., Orlandini, E., Stura, E.A.
PDB entry 5e4b: Hydroxynitrile lyase from the fern Davallia tyermanii in complex with (R)-mandelonitrile / benzaldehyde
Classification: LYASE
Source organism: Davallia tyermannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-10-05
Authors: Pavkov-Keller, T., Diepold, M., Gruber, K.
PDB entry 5e4d: Hydroxynitrile lyase from the fern Davallia tyermanii in complex with benzoic acid
Classification: LYASE
Source organism: Davallia tyermannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-10-05
Authors: Pavkov-Keller, T., Diepold, M., Gruber, K.
PDB entry 5e4e: Engineered Interleukin-13 bound to receptor
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-10-05
Authors: Moraga, I., Thomas, C., Jude, K.M., Garcia, K.C.
PDB entry 5e4f: The spring alpha-helix coordinates multiple modes of HCV NS3 helicase action
Classification: HYDROLASE
Source organism: Hepatitis C virus genotype 1b (isolate Con1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-10-05
Authors: Gu, M., Rice, C.M.
PDB entry 5e4g: Crystal structure of human growth differentiation factor 11 (GDF-11)
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-10-06
Authors: Padyana, A.K., Vaidialingam, B., Hayes, D.B., Gupta, P., Franti, M., Farrow, N.A.
PDB entry 5e4h: Crystal Structure of Apoenzyme Alpha-kinase Domain of Myosin-II Heavy Chain Kinase A
Classification: TRANSFERASE
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-10-06
Authors: Ye, Q., Cote, G.P., Jia, Z.
PDB entry 5e4i: Crystal structure of mouse CNTN5 Ig1-Ig4 domains
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-10-06
Authors: Nikolaienko, R.M., Bouyain, S.
PDB entry 5e4j: Acetylcholinesterase Methylene Blue no PEG
Classification: HYDROLASE
Source organism: Torpedo californica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2015-10-06
Authors: Dym, O.
PDB entry 5e4k: Structure of ligand binding region of uPARAP at pH 7.4
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2015-10-06
Authors: Yuan, C., Huang, M.
PDB entry 5e4l: Structure of ligand binding region of uPARAP at pH 5.3
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2015-10-06
Authors: Yuan, C., Huang, M.
PDB entry 5e4m: Hydroxynitrile lyase from the fern Davallia tyermanii in complex with p-hydroxybenzaldehyde
Classification: LYASE
Source organism: Davallia tyermannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2015-10-06
Authors: Pavkov-Keller, T., Diepold, M., Gruber, K.
PDB entry 5e4n: 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis with D-tyrosine bound in the tyrosine and phenylalanine binding sites
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-10-06
Authors: Reichau, S., Jiao, W., Parker, E.J.
PDB entry 5e4o: Human transthyretin (TTR) complexed with (Z)-((3,4-Dichloro-phenyl)-methyleneaminooxy)-acetic acid
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-10-06
Authors: Ciccone, L., Savko, M., Nencetti, S., Rossello, A., Orlandini, E., Stura, E.A.
PDB entry 5e4p: X-ray Crystal Structure Analysis of Magnetically Oriented Microcrystals of Lysozyme at 1.8 angstrom Resolution
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.792 Å
Deposited: 2015-10-06
Authors: Tsukui, S., Kimura, F., Garman, E.F., Baba, S., Mizuno, N., Mikami, B., Kimura, T.
PDB entry 5e4q: Crystal structure of mouse CNTN3 FN1-FN3 domains
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.822 Å
Deposited: 2015-10-07
Authors: Nikolaienko, R.M., Bouyain, S.
PDB entry 5e4r: Crystal structure of domain-duplicated synthetic class II ketol-acid reductoisomerase 2Ia_KARI-DD
Classification: OXIDOREDUCTASE
Source organism: Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-10-07
Authors: Cahn, J.K.B., Brinkmann-Chen, S., Buller, A.R., Arnold, F.H.
PDB entry 5e4s: Crystal structure of mouse CNTN4 FN1-FN3 domains
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-10-07
Authors: Nikolaienko, R.M., Bouyain, S.
PDB entry 5e4t: Acetylcholinesterase Methylene Blue with PEG
Classification: HYDROLASE
Source organism: Torpedo californica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2015-10-07
Authors: Dym, O.
PDB entry 5e4v: Crystal structure of measles N0-P complex
Classification: VIRAL PROTEIN
Source organism: Measles virus (strain Edmonston B); Measles virus (strain Edmonston-Moraten vaccine)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2015-10-07
Authors: Guryanov, S.G., Liljeroos, L., Kasaragod, P., Kajander, T., Butcher, S.J.
PDB entry 5e4w: Crystal structure of cpSRP43 chromodomains 2 and 3 in complex with the Alb3 tail
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana; Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-10-07
Authors: Horn, A., Ahmed, Y.L., Wild, K., Sinning, I.
PDB entry 5e4x: Crystal structure of cpSRP43 chromodomain 3
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2015-10-07
Authors: Horn, A., Ahmed, Y.L., Wild, K., Sinning, I.
PDB entry 5e4y: Orthorhombic structure of the acetyl esterase MekB
Classification: HYDROLASE
Source organism: Pseudomonas veronii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-10-07
Authors: Niefind, K., Toelzer, C., Pal, S., Watzlawick, H., Altenbuchner, J.
PDB entry 5e4z: Crystal structure of methionine gamma-lyase from Citrobacter freundii with C115A substitution
Classification: LYASE
Source organism: Citrobacter freundii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2015-10-07
Authors: Revtovich, S.V., Nikulin, A.D., Anufrieva, N.V., Morozova, E.A., Demidkina, T.V.
PDB entry 5e50: APLF/XRCC4 complex
Classification: LYASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.376 Å
Deposited: 2015-10-07
Authors: Cherry, A.L., Smerdon, S.J.
PDB entry 5e51: Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 1 with Faropenem adduct
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-10-07
Authors: Kumar, P., Lamichhane, G., Ginell, S.L.
PDB entry 5e52: Crystal structure of human CNTN5 FN1-FN3 domains
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.685 Å
Deposited: 2015-10-07
Authors: Nikolaienko, R.M., Bouyain, S.
PDB entry 5e53: Crystal structure of chicken CNTN1 FN1-FN3 domains
Classification: CELL ADHESION
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.497 Å
Deposited: 2015-10-07
Authors: Nikolaienko, R.M., Bouyain, S.
PDB entry 5e54: Two apo structures of the adenine riboswitch aptamer domain determined using an X-ray free electron laser
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-10-07
Authors: Stagno, J.R., Wang, Y.-X., Liu, Y., Bhandari, Y.R., Conrad, C.E., Nelson, G., Li, C., Wendel, D.R., White, T.A., Barty, A., Tuckey, R.A., Zatsepin, N.A., Grant, T.D., Fromme, P., Tan, K., Ji, X., Spence, J.C.H.
PDB entry 5e55: Crystal structure of mouse CNTN6 FN1-FN3 domains
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.702 Å
Deposited: 2015-10-07
Authors: Nikolaienko, R.M., Bouyain, S.
PDB entry 5e56: Crystal structure of mouse CTLA-4
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.504 Å
Deposited: 2015-10-07
Authors: Fedorov, A.A., Fedorov, E.V., SAMANTA, D., Bonanno, J.B., Almo, S.C.
PDB entry 5e57: Crystal structure of Mycobacterium smegmatis AmtR
Classification: TRANSLATION
Source organism: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2015-10-07
Authors: Vickers, C.J., McKenzie, J.L., Arcus, V.L.
PDB entry 5e58: Crystal Structure Of Cytochrome P450 2B35 from Desert Woodrat Neotoma Lepida in complex with 4-(4-chlorophenyl)imidazole
Classification: OXIDOREDUCTASE
Source organism: Neotoma lepida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-10-08
Authors: Shah, M.B., Stout, C.D., Halpert, J.R.
PDB entry 5e59: Crystal structure of reduced state of a novel disulfide oxidoreductase from Deinococcus radiodurans
Classification: OXIDOREDUCTASE
Source organism: Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-10-08
Authors: Bihani, S.C., Panicker, L., Kumar, V.
PDB entry 5e5a: Crystal structure of the chromatin-tethering domain of Human cytomegalovirus IE1 protein bound to the nucleosome core particle
Classification: PROTEIN BINDING/VIRAL PROTEIN/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.809 Å
Deposited: 2015-10-08
Authors: Fang, Q., Chen, P., Wang, M., Fang, J., Yang, N., Li, G., Xu, R.M.
PDB entry 5e5b: Crystal structure of Human Spt16 N-terminal domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2015-10-08
Authors: Marciano, G., Huang, D.T.
PDB entry 5e5c: Crystal structure of dihydropyrimidinase from Pseudomonas aeruginosa PAO1
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-10-08
Authors: Huang, C.C., Huang, Y.H., Hsieh, Y.C., Tzeng, C.T., Chen, C.J., Huang, C.Y.
PDB entry 5e5d: Native structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv. oryzae
Classification: HYDROLASE
Source organism: Xanthomonas oryzae pv. oryzae KACC10331
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-10-08
Authors: Ngo, H.P.T., Kang, L.W.
PDB entry 5e5e: X-ray structure of the adduct formed in the reaction between RNase A and a neutral organometallic derivative [Pt(pbi)(Me)(DMSO)], pbi=2-(2'-pyridil)benzimidazole (compound 3)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2015-10-08
Authors: Merlino, A.
PDB entry 5e5f: X-ray structure of the complex between RNase A and compound 4-PF6 ([(PPh3)Au(mi-pbi)Pt(Me)(DMSO)][PF6]), the heterobimetallic derivative obtained in the reaction between the organometallic compound [Pt(pbi)(Me)(DMSO)], pbi=2-(2'-pyridil)benzimidazole (compound 3) and the gold(I) compound [Au(Ph3P)][PF6]
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2015-10-08
Authors: Merlino, A.
PDB entry 5e5g: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase with D-tryptophan bound in the tryptophan and phenylalanine binding sites
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-10-08
Authors: Reichau, S., Jiao, W., Parker, E.J.
PDB entry 5e5h: Succinyl-CoA:acetate CoA-transferase (AarCH6) bound to acetate and degradation products from the acetyl-CoA analogue dethiaacetyl-CoA
Classification: TRANSFERASE
Source organism: Acetobacter aceti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.052 Å
Deposited: 2015-10-08
Authors: Mullins, E.A., Kappock, T.J.
PDB entry 5e5i: Structure of the ornithine aminotransferase from Toxoplasma gondii in complex with inactivator
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-10-08
Authors: Filippova, E.V., Minasov, G., Flores, K., Le, H.V., Silverman, R.B., McLeod, R.L., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5e5j: Joint X-ray/neutron structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with darunavir at pH 6.0
Classification: hydrolase/hydrolase inhibitor
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2015-10-08
Authors: Kovalevsky, A.Y., Gerlits, O.O.
PDB entry 5e5k: Joint X-ray/neutron structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with darunavir at pH 4.3
Classification: Hydrolase/hydrolase inhibitor
Source organism: Human immunodeficiency virus type 1 group M subtype B
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2015-10-08
Authors: Kovalevsky, A.Y., Das, A.
PDB entry 5e5l: Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 1 at 1.89 Angstrom
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2015-10-08
Authors: Kumar, P., Lamichhane, G., Ginell, S.L.
PDB entry 5e5m: Crystal structure of mouse CTLA-4 in complex with nanobody
Classification: IMMUNE SYSTEM
Source organism: Camelidae; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.182 Å
Deposited: 2015-10-08
Authors: Fedorov, A.A., Fedorov, E.V., Samanta, D., Bonanno, J.B., Almo, S.C.
PDB entry 5e5n: Ketosynthase from module 6 of the bacillaene synthase from Bacillus subtilis 168 (C167S mutant, crystal form 1)
Classification: HYDROLASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-10-08
Authors: Wagner, D.T., Gay, D.C., Keatinge-Clay, A.T.
PDB entry 5e5o: I-SmaMI bound to uncleaved DNA target in the presence of Calcium ions
Classification: HYDROLASE/DNA
Source organism: Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2015-10-08
Authors: Shen, B.W.
PDB entry 5e5p: Wild type I-SmaMI in the space group of C121
Classification: HYDROLASE
Source organism: Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-10-09
Authors: Shen, B.W.
PDB entry 5e5q: Racemic snakin-1 in P21/c
Classification: ANTIMICROBIAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-10-09
Authors: Yeung, H., Squire, C.J., Yosaatmadja, Y., Panjikar, S., Baker, E.N., Harris, P.W.R., Brimble, M.A.
PDB entry 5e5r: Crystal structure of the complex between Carbonic anhydrase-like domain of PTPRG and Immunoglobulin domains 2-3 of CNTN3
Classification: Hydrolase/Cell Adhesion
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-10-09
Authors: Nikolaienko, R.M., Bouyain, S.
PDB entry 5e5s: I-SmaMI K103A mutant
Classification: Hydrolase/DNA
Source organism: Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2015-10-09
Authors: Shen, B.W.
PDB entry 5e5t: Quasi-racemic snakin-1 in P1 after radiation damage
Classification: ANTIMICROBIAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.572 Å
Deposited: 2015-10-09
Authors: Yeung, H., Squire, C.J., Yosaatmadja, Y., Panjikar, S., Baker, E.N., Harris, P.W.R., Brimble, M.A.
PDB entry 5e5u: Crystal structure of the complex between Carbonic anhydrase-like domain of PTPRG and Immunoglobulin domains 2-3 of CNTN6
Classification: Cell Adhesion/Hydrolase
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-10-09
Authors: Nikolaienko, R.M., Bouyain, S.
PDB entry 5e5v: Structure of amyloid forming peptide NFGAILS (residues 22-28) from Islet Amyloid Polypeptide
Classification: de novo protein, membrane protein
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2015-10-09
Authors: Soriaga, A.B., Macdonald, R., Sawaya, M.R., Sangwan, S., Eisenberg, D.
PDB entry 5e5w: Hemagglutinin-esterase-fusion mutant structure of influenza D virus
Classification: HYDROLASE
Source organism: Influenza D virus (D/swine/Oklahoma/1334/2011)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-10-09
Authors: Song, H., Qi, J., Shi, Y., Gao, G.F.
PDB entry 5e5x: Structure of the amyloid forming peptide ANFLVH (residues 13-18) from islet amyloid polypeptide
Classification: de novo protein, membrane protein
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2015-10-09
Authors: Soriaga, A.B., Eisenberg, D.
PDB entry 5e5y: Quasi-racemic snakin-1 in P1 before radiation damage
Classification: ANTIMICROBIAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.506 Å
Deposited: 2015-10-09
Authors: Yeung, H., Squire, C.J., Yosaatmadja, Y., Panjikar, S., Baker, E.N., Harris, P.W.R., Brimble, M.A.
PDB entry 5e5z: Structure of the amyloid forming peptide LVHSSN (residues
Classification: de novo protein, membrane protein
Experimental method: X-RAY DIFFRACTION
Resolution: 1.664 Å
Deposited: 2015-10-09
Authors: Soriaga, A.B., Eisenberg, D.
PDB entry 5e61: Structure of amyloid-forming peptide FGAILSS (residues 23-29) from islet amyloid polypeptide
Classification: de novo protein, membrane protein
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2015-10-09
Authors: Soriaga, A.B., Eisenberg, D.
PDB entry 5e62: HEF-mut with Tr323 complex
Classification: HYDROLASE
Source organism: Influenza D virus (D/swine/Oklahoma/1334/2011)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.203 Å
Deposited: 2015-10-09
Authors: Song, H., Qi, J., Shi, Y., Gao, G.F.
PDB entry 5e63: K262A mutant of I-SmaMI
Classification: Hydrolase/DNA
Source organism: Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-10-09
Authors: Shen, B., Stoddard, B.
PDB entry 5e64: Hemagglutinin-esterase-fusion protein structure of influenza D virus
Classification: HYDROLASE
Source organism: Influenza D virus (D/swine/Oklahoma/1334/2011)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-10-09
Authors: Song, H., Qi, J., Shi, Y., Gao, G.F.
PDB entry 5e65: The complex structure of Hemagglutinin-esterase-fusion mutant protein from the influenza D virus with receptor analog 9-O-Ac-3'SLN (Tr322)
Classification: HYDROLASE
Source organism: Influenza D virus (D/swine/Oklahoma/1334/2011)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-10-09
Authors: Song, H., Qi, J., Shi, Y., Gao, G.F.
PDB entry 5e66: The complex structure of Hemagglutinin-esterase-fusion mutant protein from the influenza D virus with receptor analog 9-N-Ac-Sia
Classification: HYDROLASE
Source organism: Influenza D virus (D/swine/Oklahoma/1334/2011)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2015-10-09
Authors: Song, H., Qi, J., Shi, Y., Gao, G.F.
PDB entry 5e67: K103A/K262A double mutant of I-SmaMI
Classification: Hydrolase/DNA
Source organism: Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-10-09
Authors: Shen, B.W., Stoddard, B.
PDB entry 5e68: High resolution crystal structure of LuxS - Quorum sensor molecular complex from Salmonella typhi at 1.58 Angstroms
Classification: LYASE
Source organism: Salmonella typhi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2015-10-09
Authors: Perumal, P., Raina, R., Arockiasamy, A., SundaraBaalaji, N.
PDB entry 5e69: Glucocorticoid receptor DNA binding domain - IL8 NF-kB response element complex
Classification: dna binding protein/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-10-09
Authors: Hudson, W.H., Rye, E.A., Herbst, A.G., Ortlund, E.A.
PDB entry 5e6a: Glucocorticoid receptor DNA binding domain - PLAU NF-kB response element complex
Classification: dna binding protein/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.197 Å
Deposited: 2015-10-09
Authors: Hudson, W.H., Rye, E.A., Herbst, A.G., Ortlund, E.A.
PDB entry 5e6b: Glucocorticoid receptor DNA binding domain - RELB NF-kB response element complex
Classification: dna binding protein/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-10-09
Authors: Hudson, W.H., Rye, E.A., Herbst, A.G., Ortlund, E.A.
PDB entry 5e6c: Glucocorticoid receptor DNA binding domain - CCL2 NF-kB response element complex
Classification: dna binding protein/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-10-09
Authors: Hudson, W.H., Rye, E.A., Herbst, A.G., Ortlund, E.A.
PDB entry 5e6d: Glucocorticoid receptor DNA binding domain - ICAM1 NF-kB response element complex
Classification: dna binding protein/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-10-09
Authors: Hudson, W.H., Rye, E.A., Herbst, A.G., Ortlund, E.A.
PDB entry 5e6e: Crystal Structure of Carbonmonoxy Sickle Hemoglobin in R-State Conformation
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2015-10-09
Authors: Safo, M.K., Ahmed, M.H.
PDB entry 5e6f: Canarypox virus resolvase
Classification: VIRAL PROTEIN
Source organism: Canarypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-10-09
Authors: Li, H., Hwang, Y., Perry, K., Bushman, F.D., Van Duyne, G.D.
PDB entry 5e6g: Crystal Structure of De Novo Designed Protein CA01
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2015-10-09
Authors: Jacobs, T.M., Williams, T., Kuhlman, B.
PDB entry 5e6h: A Linked Jumonji Domain of the KDM5A Lysine Demethylase
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.238 Å
Deposited: 2015-10-09
Authors: Horton, J.R., Cheng, X.
PDB entry 5e6i: Crystal structure of TCR PF8 in complex with flu MP(58-66) epitope presented by HLA-A2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2015-10-09
Authors: Gao, M., Mariuzza, R.
PDB entry 5e6j: Structure of SARS PLpro bound to a Lys48-linked di-ubiquitin activity based probe
Classification: HYDROLASE
Source organism: Human SARS coronavirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2015-10-09
Authors: Lima, C.D., Bekes, M.
PDB entry 5e6k: Ketosynthase from module 6 of the bacillaene synthase from Bacillus subtilis 168 (C167S mutant, crystal form 2)
Classification: HYDROLASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2015-10-10
Authors: Wagner, D.T., Gay, D.C., Keatinge-Clay, A.T.
PDB entry 5e6m: Crystal structure of human wild type GlyRS bound with tRNAGly
Classification: LIGASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.927 Å
Deposited: 2015-10-10
Authors: Xie, W., Qin, X., Deng, X., Chen, L., Liu, Y.
PDB entry 5e6n: Crystal structure of C. elegans LGG-2
Classification: PROTEIN BINDING
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2015-10-10
Authors: Qi, X., Ren, J.Q., Wu, F., Zhang, H., Feng, W.
PDB entry 5e6o: Crystal structure of C. elegans LGG-2 bound to an AIM/LIR motif
Classification: PROTEIN BINDING/PEPTIDE
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-10-10
Authors: Qi, X., Ren, J.Q., Wu, F., Zhang, H., Feng, W.
PDB entry 5e6p: PlexinB2 cytoplasmic region/PDZ-RhoGEF PDZ domain complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.215 Å
Deposited: 2015-10-10
Authors: Pascoe, H.G., Zhang, X.
PDB entry 5e6q: Importin alpha binding to XRCC1 NLS peptide
Classification: PROTEIN BINDING
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.305 Å
Deposited: 2015-10-10
Authors: Pedersen, L.C., Kirby, T.W., Gassman, N.R., Smith, C.E., Gabel, S.A., Sobhany, M., Wilson, S.H., London, R.E.
PDB entry 5e6r: Structures of leukocyte integrin aLb2: The aI domain, the headpiece, and the pocket for the internal ligand
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.901 Å
Deposited: 2015-10-10
Authors: Sen, M., Springer, T.A.
PDB entry 5e6s: Structures of leukocyte integrin aLB2: The aI domain, the headpiece, and the pocket for the internal ligand
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-10-10
Authors: Springer, T.A., Sen, M.
PDB entry 5e6t: Crystal structure of bovine norovirus P domain
Classification: VIRAL PROTEIN
Source organism: Norovirus Bo/GIII/B309/2003/BEL
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2015-10-10
Authors: Singh, B.K., Hansman, G.S.
PDB entry 5e6u: Structures of leukocyte integrin aLb2: The aI domain, the headpiece, and the pocket for the internal ligand
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-10-10
Authors: Sen, M., Springer, T.A.
PDB entry 5e6v: Re-refinement of the Crystal Structure of the Plexin-Semaphorin-Integrin Domain/Hybrid Domain/I-EGF1 Segment from the Human Integrin b2 Subunit
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-10-10
Authors: Sen, M., Springer, T.A.
PDB entry 5e6w: Re-refinement of the Crystal Structure of the Plexin-Semaphorin-Integrin Domain/Hybrid Domain/I-EGF1 Segment from the Human Integrin b2 Subunit
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-10-10
Authors: Springer, T.A., Sen, M.
PDB entry 5e6x: Re-refinement of the Crystal Structure of the Plexin-Semaphorin-Integrin Domain/Hybrid Domain/I-EGF1 Segment from the Human Integrin b2 Subunit
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2015-10-10
Authors: Springer, T.A., Sen, M.
PDB entry 5e6y: Crystal structure of E.Coli branching enzyme in complex with alpha cyclodextrin
Classification: TRANSFERASE
Source organism: Escherichia coli O139:H28 (strain E24377A / ETEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-10-11
Authors: Feng, L., Nosrati, M., Geiger, J.H.
PDB entry 5e6z: Crystal structure of Ecoli Branching Enzyme with beta cyclodextrin
Classification: TRANSFERASE
Source organism: Escherichia coli O139:H28 (strain E24377A / ETEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.878 Å
Deposited: 2015-10-11
Authors: Feng, L., Nosrati, M., Geiger, J.H.
PDB entry 5e70: Crystal structure of Ecoli Branching Enzyme with gamma cyclodextrin
Classification: TRANSFERASE
Source organism: Escherichia coli O139:H28 (strain E24377A / ETEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2015-10-11
Authors: Feng, L., Nosrati, M., Geiger, J.H.
PDB entry 5e71: Crystal structure of the archaeal tRNA m2G/m22G10 methyltransferase (aTrm11) from Thermococcus kodakarensis
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-10-11
Authors: Hirata, A.
PDB entry 5e72: Crystal structure of the archaeal tRNA m2G/m22G10 methyltransferase (aTrm11) in complex with S-adenosyl-L-methionine (SAM) from Thermococcus kodakarensis
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.739 Å
Deposited: 2015-10-11
Authors: Hirata, A.
PDB entry 5e73: Crystal Structure of BAZ2B bromodomain in complex with acetylindole compound UZH47
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2015-10-11
Authors: Lolli, G., Spiliotopoulos, D., Unzue, A., Nevado, C., Caflisch, A.
PDB entry 5e74: Crystal Structure of BAZ2B bromodomain in complex with acetylindole compound UZH50
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.783 Å
Deposited: 2015-10-11
Authors: Lolli, G., Spiliotopoulos, D., Dolbois, A., Nevado, C., Caflisch, A.
PDB entry 5e75: Crystal structure of Bacova_02651
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2015-10-11
Authors: Koropatkin, N.M.
PDB entry 5e76: Crystal structure of Bacova_02651 with xylogluco-oligosaccharide
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-10-11
Authors: Koropatkin, N.M.
PDB entry 5e78: Crystal structure of P450 BM3 heme domain variant complexed with Co(III)Sep
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-10-12
Authors: Panneerselvm, S., Shehzad, A., Bocola, M., Mueller-Dieckmann, J., Schwaneberg, U.
PDB entry 5e79: Macromolecular diffractive imaging using imperfect crystals
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2015-10-12
Authors: Ayyer, K., Yefanov, O., Oberthur, D., Roy-Chowdhury, S., Galli, L., Mariani, V., Basu, S., Coe, J., Conrad, C.E., Fromme, R., Schaffer, A., Dorner, K., James, D., Kupitz, C., Metz, M., Nelson, G., Xavier, P.L., Beyerlein, K.R., Schmidt, M., Sarrou, I., Spence, J.C.H., Weierstall, U., White, T.A., Yang, J.-H., Zhao, Y., Liang, M., Aquila, A., Hunter, M.S., Koglin, J.E., Boutet, S., Fromme, P., Barty, A., Chapman, H.N.
PDB entry 5e7b: Structure of a nanobody (vHH) from camel against phage Tuc2009 RBP (BppL, ORF53)
Classification: IMMUNE SYSTEM
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2015-10-12
Authors: Legrand, P., Collins, B., Blangy, S., Murphy, J., Spinelli, S., Gutierrez, C., Richet, N., Kellenberger, C., Desmyter, A., Mahony, J., van Sinderen, D., Cambillau, C.
PDB entry 5e7c: Macromolecular diffractive imaging using imperfect crystals - Bragg data
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus (strain BP-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.5 Å
Deposited: 2015-10-12
Authors: Ayyer, K., Yefanov, O., Oberthuer, D., Roy-Chowdhury, S., Galli, L., Mariani, V., Basu, S., Coe, J., Conrad, C.E., Fromme, R., Schaffner, A., Doerner, K., James, D., Kupitz, C., Metz, M., Nelson, G., Xavier, P.L., Beyerlein, K.R., Schmidt, M., Sarrou, I., Spence, J.C.H., Weierstall, U., White, T.A., Yang, J.-H., Zhao, Y., Liang, M., Aquila, A., Hunter, M.S., Robinson, J.S., Koglin, J.E., Boutet, S., Fromme, P., Barty, A., Chapman, H.N.
PDB entry 5e7d: Crystal Structure of the fifth bromodomain of human PB1 in complex with a hydroxyphenyl ligand
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2015-10-12
Authors: Filippakopoulos, P., Picaud, S., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Owen, D., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 5e7f: Complex between lactococcal phage Tuc2009 RBP head domain and a nanobody (L06)
Classification: VIRAL PROTEIN
Source organism: Camelus dromedarius; Lactococcus phage Tuc2009
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-10-12
Authors: Legrand, P., Collins, B., Blangy, S., Murphy, J., Spinelli, S., Gutierrez, C., Richet, N., Kellenberger, C., Desmyter, A., Mahony, J., van Sinderen, D., Cambillau, C.
PDB entry 5e7g: Crystal structure of Bacova_02650 with xylogluco-oligosaccharide
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2015-10-12
Authors: Koropatkin, N.M.
PDB entry 5e7h: Crystal structure of domains CD (residues 230-489) of Bacova_02650
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2015-10-12
Authors: Koropatkin, N.M.
PDB entry 5e7i: Crystal structure of the active catalytic core of the human DEAD-box protein DDX3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.223 Å
Deposited: 2015-10-12
Authors: Floor, S.N., Condon, K.J., Doudna, J.A.
PDB entry 5e7j: Crystal structure of the active catalytic core of the human DEAD-box protein DDX3 bound to AMP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2015-10-12
Authors: Floor, S.N., Condon, K.J., Doudna, J.A.
PDB entry 5e7k: Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2015-10-12
Authors: Rozov, A., Demeshkina, N., Khusainov, I., Yusupov, M., Yusupova, G.
PDB entry 5e7l: Crystal structure of mouse CNTN2 FN1-FN3 domains
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.002 Å
Deposited: 2015-10-12
Authors: Nikolaienko, R.M., Bouyain, S.
PDB entry 5e7m: Crystal structure of the active catalytic core of the human DEAD-box protein DDX3 bound to AMPPNP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.304 Å
Deposited: 2015-10-12
Authors: Floor, S.N., Condon, K.J., Doudna, J.A.
PDB entry 5e7n: Crystal Structure of RPA70N in complex with VU0085636
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2015-10-12
Authors: Gilston, B.A., Patrone, J.D., Pelz, N.F., Bates, B.S., Souza-Fagundes, E.M., Vangamudi, B., Camper, D., Kuznetsov, A., Browning, C.F., Feldkamp, M.D., Olejniczak, E.T., Rossanese, O.W., Waterson, A.G., Fesik, S.W., Chazin, W.J.
PDB entry 5e7o: Crystal structure of the perchlorate reductase PcrAB mutant W461E of PcrA from Azospira suillum PS
Classification: OXIDOREDUCTASE
Source organism: Dechlorosoma suillum (strain ATCC BAA-33 / DSM 13638 / PS)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-10-12
Authors: Tsai, C.-L., Tainer, J.A.
PDB entry 5e7p: Crystal Structure of MSMEG_0858 (Uniprot A0QQS4), a AAA ATPase.
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.507 Å
Deposited: 2015-10-12
Authors: Unciulac-Carp, M., Smith, P., Shuman, S.
PDB entry 5e7q: Acyl-CoA synthetase PtmA2 from Streptomyces platensis
Classification: TRANSFERASE
Source organism: Streptomyces platensis subsp. rosaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2015-10-12
Authors: Osipiuk, J., Cuff, M.E., Hatzos-Skintges, C., Endres, M., Babnigg, G., Rudolf, J., Ma, M., Chang, C.Y., Shen, B., Phillips Jr., G.N., Joachimiak, A., Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
PDB entry 5e7r: Crystal structure of TL10-81 bound to TAK1-TAB1
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2015-10-13
Authors: Gurbani, D., Hunter, J.C., Tan, L., Chen, Z., Westover, K.D.
PDB entry 5e7s: Hexameric structure of a LonA protease domain in active state
Classification: HYDROLASE
Source organism: Meiothermus taiwanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2015-10-13
Authors: Lin, C.-C., Su, S.-C., Chang, C.-I.
PDB entry 5e7t: Structure of the tripod (BppUct-A-L) from the baseplate of bacteriophage Tuc2009
Classification: VIRAL PROTEIN
Source organism: Lactococcus phage Tuc2009
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-10-13
Authors: Legrand, P., Collins, B., Blangy, S., Murphy, J., Spinelli, S., Gutierrez, C., Richet, N., Kellenberger, C., Desmyter, A., Mahony, J., van Sinderen, D., Cambillau, C.
PDB entry 5e7u: MBP-MamC loop structure, a magnetite biomineralizing protein from Magnetospirillium magneticum AMB-1
Classification: Magnetite binding protein
Source organism: Escherichia coli; Magnetospirillum magneticum AMB-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-10-13
Authors: Nudelman, H., Zarivach, R.
PDB entry 5e7v: Potent Vitamin D Receptor Agonist
Classification: TRANSCRIPTION
Source organism: Danio rerio; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-10-13
Authors: Otero, R., Seoane, S., Sigueiro, R., Belorusova, A.Y., Maestro, M.A., Perez-Fernandez, R., Rochel, N., Mourino, A.
PDB entry 5e7w: X-ray Structure of Human Recombinant 2Zn insulin at 0.92 Angstrom
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.9519 Å
Deposited: 2015-10-13
Authors: Lisgarten, D.R., Naylor, C.E., Palmer, R.A., Lobley, C.M.C.
PDB entry 5e7x: Ligand binding domain 1 of Penicillium marneffei MP1 protein in complex with palmitic acid
Classification: LIPID BINDING PROTEIN
Source organism: Talaromyces marneffei PM1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-10-13
Authors: Lam, W.H., Zhang, H., Hao, Q.
PDB entry 5e7y: Crystal structure of P450 BM3 heme domain M7 variant
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-10-13
Authors: Panneerselvm, S., Shehzad, A., Bocola, M., Mueller-Dieckmann, J., Schwaneberg, U.
PDB entry 5e7z: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis in complex with D/L-tryptophan and D-phenylalanine
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-10-13
Authors: Reichau, S., Jiao, W., Parker, E.J.
PDB entry 5e80: The crystal structure of PDEd in complex with inhibitor-2a
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-10-13
Authors: Ismail, S., Fansa, E.K., Murarka, S., Wittinghofer, A.
PDB entry 5e81: Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2015-10-13
Authors: Rozov, A., Demeshkina, N., Khusainov, I., Yusupov, M., Yusupova, G.
PDB entry 5e83: CRYSTAL STRUCTURE OF CARBONMONOXY HEMOGLOBIN S (LIGANDED SICKLE CELL HEMOGLOBIN) COMPLEXED WITH GBT440, CO-CRYSTALLIZATION EXPERIMENT
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-10-13
Authors: Patskovska, L., Patskovsky, Y., Bonanno, J.B., Almo, S.C.
PDB entry 5e84: ATP-bound state of BiP
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2015-10-13
Authors: Liu, Q., Yang, J., Nune, M., Zong, Y., Zhou, L.
PDB entry 5e85: isolated SBD of BiP
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2015-10-13
Authors: Liu, Q., Yang, J., Nune, M., Zong, Y., Zhou, L.
PDB entry 5e86: isolated SBD of BiP with loop34 modification
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.681 Å
Deposited: 2015-10-13
Authors: Liu, Q., Yang, J., Nune, M., Zong, Y., Zhou, L.
PDB entry 5e88: Crystal structure of Human galectin-3 CRD in complex with thienyl-1,2,3-triazolyl thiodigalactoside inhibitor
Classification: SUGAR BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-10-13
Authors: Collins, P.M., Blanchard, H.
PDB entry 5e89: Crystal structure of Human galectin-3 CRD in complex with 3-fluophenyl-1,2,3-triazolyl thiodigalactoside inhibitor
Classification: SUGAR BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-10-13
Authors: Collins, P.M., Blanchard, H.
PDB entry 5e8a: Crystal structure of Human galectin-3 CRD in complex with 4-fluophenyl-1,2,3-triazolyl thiodigalactoside inhibitor
Classification: SUGAR BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-10-13
Authors: Collins, P.M., Blanchard, H.
PDB entry 5e8b: Crystal structure of the S. cerevisiae Rtf1 histone modification domain mutant R126A
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2015-10-14
Authors: Wier, A.D., Heroux, A., VanDemark, A.P.
PDB entry 5e8c: pseudorabies virus nuclear egress complex, pUL31, pUL34
Classification: VIRAL PROTEIN
Source organism: Suid herpesvirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-10-14
Authors: Zeev-Ben-Mordehai, T., Cheleski, J., Whittle, C., El Omari, K., Harlos, K., Hagen, C., Klupp, B., Mettenleiter, T.C., Gruenewald, K.
PDB entry 5e8d: Crystal structure of human epiregulin in complex with the Fab fragment of murine monoclonal antibody 9E5
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-10-14
Authors: Kado, Y., Mizohata, E., Nagatoishi, S., Iijima, M., Shinoda, K., Miyafusa, T., Nakayama, T., Yoshizumi, T., Sugiyama, A., Kawamura, T., Lee, Y.H., Matsumura, H., Doi, H., Fujitani, H., Kodama, T., Shibasaki, Y., Tsumoto, K., Inoue, T.
PDB entry 5e8e: Crystal structure of thrombin bound to an exosite 1-specific IgA Fab
Classification: IMMUNE SYSTEM/HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-10-14
Authors: Baglin, T.P., Langdown, J., Frasson, R., Huntington, J.A.
PDB entry 5e8f: Structure of Fully modified geranylgeranylated PDE6C Peptide in complex with PDE6D
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-10-14
Authors: Fansa, E.K., O'Reilly, N.J., Ismail, S.A., Wittinghofer, A.
PDB entry 5e8g: Crystal structure of the DNA binding domain of human transcription factor FLI1
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-10-14
Authors: Hou, C., Tsodikov, O.V.
PDB entry 5e8h: Crystal structure of geranylfarnesyl pyrophosphate synthases 2 from Arabidopsis thaliana
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-10-14
Authors: Wang, C., Chen, Q., Wang, G., Zhang, P.
PDB entry 5e8i: Crystal structure of the DNA binding domain of human transcription factor FLI1 in complex with a 10-mer DNA ACCGGAAGTG
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2015-10-14
Authors: Hou, C., Tsodikov, O.V.
PDB entry 5e8j: Crystal structure of mRNA cap guanine-N7 methyltransferase in complex with RAM
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2015-10-14
Authors: Petit, P., Cowling, V.