LiteFold/PDB huggingface dataset:
PDB entry 9i1e: Iron loaded human H-chain ferritin D131N mutant 20 minute oxygen soak
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2025-01-16
Authors: Bugg, Z., Hemmings, A.M., Bradley, J.M.
PDB entry 9i1f: Iron loaded human mitochondrial ferritin D131N mutant 20 minute oxygen soak
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2025-01-16
Authors: Bugg, Z., Hemmings, A.M., Bradley, J.M.
PDB entry 9i1g: Crystal structure of zebrafish S100I2 in Mg2+-bound form
Classification: SIGNALING PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-01-16
Authors: Demou, M., Yatime, L.
PDB entry 9i1h: Crystal structure of human CD73 (ecto-5'-nucleotidase) in complex with the AMPCP analog PSB-17230 in the closed state (crystal form IV)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-01-16
Authors: Strater, N., Moschuetz, S., Idris, R.M., Al-Hroub, H., Schmies, C.C., Muller, C.E.
PDB entry 9i1i: Cryo-EM structure of mouse RNF213 (WB3/WB4 + ATP)
Classification: LIGASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2025-01-16
Authors: Grabarczyk, D.B., Ahel, J., Clausen, T.
PDB entry 9i1j: Cryo-EM structure of mouse RNF213:UBE2L3 transthiolation intermediate, chemically stabilized, and ATPgS
Classification: LIGASE
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-01-16
Authors: Grabarczyk, D.B., Ahel, J., Clausen, T.
PDB entry 9i1l: Crystal structure of Kalirin/Rac1 in complex with RS-009
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2025-01-16
Authors: Gray, J.L., Seupel, R., Callens, M.C., Brennan, P.E., von Delft, F.
PDB entry 9i1m: Structure of AauA, a sugar-binding protein with its substrate
Classification: SUGAR BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2025-01-16
Authors: Josts, I., Cottam, C., Connolly, J.P.R.
PDB entry 9i1n: The MK-RSL - sulfato-terphen[3]arene complex, P63 form, citrate pH 4.0
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-01-16
Authors: Ifeagwu, M.C., Mockler, N.M., Crowley, P.B.
PDB entry 9i1o: The MK-RSL - sulfato-terphen[3]arene complex, C121 form
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2025-01-16
Authors: Ifeagwu, M.C., Mockler, N.M., Crowley, P.B.
PDB entry 9i1p: Structure of RecQL- Myc G-quadruplex - ADP complex from Bos taurus
Classification: HYDROLASE
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2025-01-16
Authors: Song, Z.Y., Liu, N.N., Ai, X., Rety, S., Xi, X.G.
PDB entry 9i1q: HER3 receptor in complex with the Fab fragment of TK-hu A3 monoclonal antibody
Classification: ANTITUMOR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-01-16
Authors: Bulfaro, G., Savino, C., Costanzo, A., Fata, F., Vallone, B., Montemiglio, L.C.
PDB entry 9i1r: Structure of the bicylindrical allophycocyanin core expressed during far-red light photoacclimation (FaRLiP)
Classification: PHOTOSYNTHESIS
Source organism: Chroococcidiopsis thermalis PCC 7203
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2025-01-16
Authors: Consoli, G., Leong, H.F., Davis, G.A., Richardson, T., McInnes, A., Murray, J.W., Fantuzzi, A., Rutherford, A.W.
PDB entry 9i1s: Crystal structure of the SARS-CoV-2 helicase NSP13 in complex with myricetin
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2025-01-16
Authors: Kloskowski, P., Neumann, P., Ficner, R.
PDB entry 9i1t: CARM1 in complex with arg-MMA analog
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2025-01-16
Authors: Cura, V., Dursun, E., Troffer, N., Cavarelli, J.
PDB entry 9i1u: Lytic polysaccharide monooxygenase from Cellvibrio japonicus - CjAA10B
Classification: OXIDOREDUCTASE
Source organism: Cellvibrio japonicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-01-17
Authors: Branch, J., Hemsworth, G.R.
PDB entry 9i1w: High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum
Classification: RIBOSOME
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.38 Å
Deposited: 2025-01-17
Authors: Wild, K., Klein, M.A., Sinning, I.
PDB entry 9i1x: Crystal structure of the E. coli TetR family regulator CecR
Classification: TRANSCRIPTION
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2025-01-17
Authors: Pietrzyk-Brzezinska, A.J., Koczurowska, A., Nielipinski, M., Nielipinska, D., Sekula, B.
PDB entry 9i1y: WxLIP from Enterococcus faecium
Classification: CELL ADHESION
Source organism: Enterococcus faecium DO
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-01-17
Authors: Williamson, M.P., Hassan, M.U.
PDB entry 9i20: Cryo-EM structure of human SLC35B1 with ADP
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2025-01-17
Authors: Gulati, A., Ahn, D., Suades, A., Drew, D.
PDB entry 9i22: Structure of Human helicase RecQ1- Myc G-quadruplex - ADP complex
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2025-01-17
Authors: Song, Z.Y., Liu, N.N., Ai, X., Rety, S., Xi, X.G.
PDB entry 9i23: Structure of Human helicase RecQ1- 795-2T G-quadruplex - ADP complex
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.69 Å
Deposited: 2025-01-17
Authors: Song, Z.Y., Liu, N.N., Ai, X., Rety, S., Xi, X.G.
PDB entry 9i24: Coagulation factor Xa complex with a2-loop peptide
Classification: BLOOD CLOTTING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2025-01-17
Authors: Huntington, J.A., Ustok, F.I.
PDB entry 9i25: WxLIP from Enterococcus faecium locus A bound to long WxL
Classification: CELL ADHESION
Source organism: Enterococcus faecium DO
Experimental method: X-RAY DIFFRACTION
Resolution: 1.911 Å
Deposited: 2025-01-17
Authors: Williamson, M.P., Hassan, M.U.
PDB entry 9i26: inactive Form II Rubisco from Rhodospirillum rubrum
Classification: LYASE
Source organism: Rhodospirillum rubrum ATCC 11170
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-01-20
Authors: Kueffner, A.M., Zarzycki, J., Erb, T.J.
PDB entry 9i27: activated Form II Rubisco from Rhodospirillum rubrum with bound Magnesium and CABP
Classification: LYASE
Source organism: Rhodospirillum rubrum ATCC 11170
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-01-20
Authors: Kueffner, A.M., Zarzycki, J., Erb, T.J.
PDB entry 9i28: Form II Rubisco inside EPYC1-formed liquid-liquid phase separated condensates with bound Magnesium and CABP
Classification: LYASE
Source organism: Rhodospirillum rubrum ATCC 11170
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2025-01-20
Authors: Kueffner, A.M., Zarzycki, J., Prinz, S., Erb, T.J.
PDB entry 9i29: Human Carbonic Anhydrase II in complex with N-(2-(benzylamino)-2-oxo-1-(4-sulfamoylphenyl)ethyl)-N-(3-chloro-4-methoxyphenyl)propiolamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2025-01-20
Authors: Angeli, A., Ferraroni, M.
PDB entry 9i2a: FdC of Rhodobacter capsulatus
Classification: ELECTRON TRANSPORT
Source organism: Rhodobacter capsulatus SB 1003
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-01-20
Authors: Pfister, P., Addison, H.G., Erb, T.J., Rebelein, J.G.
PDB entry 9i2b: SPIN90-Arp2/3 nucleated bidirectional actin filaments
Classification: CYTOSOLIC PROTEIN
Source organism: Amanita phalloides; Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-20
Authors: Liu, T., Moores, C.A.
PDB entry 9i2c: Cryo-EM structure of KBTBD4 WT-HDAC2-CoREST1 2:1:1 complex mediated by molecular glue UM171
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-01-20
Authors: Chen, Z., Chi, G., Pike, A.C.W., Montes, B., Bullock, A.N.
PDB entry 9i2d: NMT1-NAC bound human RNC with 10 amino acid ARF1-linker
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.19 Å
Deposited: 2025-01-20
Authors: Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 9i2e: NMT1-NAC bound human ribosome (combined translational states)
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2025-01-20
Authors: Denk, T., Berninghausen, O., Beckmann, R.
PDB entry 9i2f: Cryo-EM structure of retron Eco2 (Ec67)
Classification: ANTIVIRAL PROTEIN
Source organism: Escherichia coli NCTC 86
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-01-20
Authors: Jasnauskaite, M., Miksys, A., Skorupskaite, A., Malinauskaite, L., Pausch, P.
PDB entry 9i2g: Cryo-EM structure of retron Eco2 (Ec67) in presence of Mg ions
Classification: ANTIVIRAL PROTEIN
Source organism: Escherichia coli NCTC 86
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-20
Authors: Skorupskaite, A., Jasnauskaite, M., Malinauskaite, L., Pausch, P.
PDB entry 9i2h: A 3.3 angstrom cryo-EM structure of an engineered high-affinity human prothrombinase complex
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2025-01-20
Authors: Huntington, J.A., Faille, A., Ustok, F.I.
PDB entry 9i2i: X-ray structure of the B1 domain of streptococcal protein G triple mutant T2Q, N8D, and N37D (GB1-QDD).
Classification: IMMUNE SYSTEM
Source organism: Streptococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2025-01-20
Authors: Engilberge, S., Becker, L.M., Kapitonova, A., Schanda, P.
PDB entry 9i2l: BtuJ2 - DUF4465 domain containing protein
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2025-01-21
Authors: Clarke, C., Banasik, M., Pickersgill, R.
PDB entry 9i2m: Crystal structure of the lipocalin cat allergen Fel d 4
Classification: ALLERGEN
Source organism: Felis catus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2025-01-21
Authors: Todorovic, N., Grininger, C., Pavkov-Keller, T., Keller, W.
PDB entry 9i2n: Crystal structure of zebrafish S100I1 protein in apo form
Classification: SIGNALING PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-01-21
Authors: Paris, T., Yatime, L.
PDB entry 9i2o: PB2 cap-binding domain of human pathogenic influenza A virus H5N1 in complex with m7GTP
Classification: RNA BINDING PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2025-01-21
Authors: Falke, S., Lewe, P., Witt, S., Wrenger, C., Meents, A.
PDB entry 9i2p: Crystal structure of Listeria monocytogenes ChiA
Classification: HYDROLASE
Source organism: Listeria monocytogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-01-21
Authors: Rehman, S., Garnett, J.A.
PDB entry 9i2q: Wzc-K540M-3YE MgADP C1
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-01-22
Authors: Liu, J.W., Yang, Y., Naismith, J.H.
PDB entry 9i2r: Wzc-K540M-3YE MgADP C8
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2025-01-22
Authors: Liu, J.W., Yang, Y., Naismith, J.H.
PDB entry 9i2s: Velvet domain of the transcriptional regulator VeA
Classification: CELL CYCLE
Source organism: Aspergillus nidulans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-01-22
Authors: Neumann, P., Ficner, R.
PDB entry 9i2t: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i2u: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with ibuprofenoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i2v: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with fenoprofenoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i2w: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with flurbiprofenoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i2x: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with naproxenoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i2y: Human DHODH in Complex with QC6352
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-01-22
Authors: Kraemer, A., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 9i2z: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with 2-methyldecanoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i30: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with ketoprofenoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i31: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with acetyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i32: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with isobutanoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i33: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with butanoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i34: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with hexanoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i35: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with octanoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i36: Alpha-Methylacyl-CoA racemase from Mycobacterium tuberculosis in complex with decanoyl-CoA
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2025-01-22
Authors: Mojanaga, O.O., Acharya, K.R., Lloyd, M.D.
PDB entry 9i37: Csu pilus rod purified from Acinetobacter baumannii
Classification: CELL ADHESION
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2025-01-22
Authors: Malmi, H., Zavialov, A.V., Pakharukova, N.
PDB entry 9i38: Solution structure of the de novo designed monoheme protein m4D2 with bound iron(III) 2,4-dimethyldeuteroporphyrin IX
Classification: DE NOVO PROTEIN
Source organism: test organism
Experimental method: SOLUTION NMR
Deposited: 2025-01-22
Authors: Williams, C., Hutchins, G.H., Molinaro, P.M., Berrones-Reyes, J.C., Lichtenstein, B.R., Koder, R.L., Anderson, J.L.R.
PDB entry 9i3e: CP of RHDV mutant - 29N
Classification: VIRUS LIKE PARTICLE
Source organism: Rabbit hemorrhagic disease virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-22
Authors: Novoa, G., Martinez-Romero, J.M., Perez-Mata, C., Barcena, J.
PDB entry 9i3f: Crystal structure of the AGR2 and IRE1beta_loop complex
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-01-22
Authors: Yan, Y., Ron, D.
PDB entry 9i3g: X-ray structure of the drug binding domain of AlbA in complex with the KMR-04-154 compound of the pyrrolobenzodiazepines class
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella oxytoca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.383 Å
Deposited: 2025-01-22
Authors: Di Palma, M., Steiner, R.A.
PDB entry 9i3h: CP of RHDV mutant - N15
Classification: VIRUS LIKE PARTICLE
Source organism: Oryctolagus cuniculus; Rabbit hemorrhagic disease virus-AST89
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-01-23
Authors: Novoa, G., Martinez-Romero, J.M., Perez-Mata, C., Barcena, J., Caston, J.R.
PDB entry 9i3i: Cryo-EM structure of the MCM-ORC (MO) complex featuring an ORC2 regulatory domain involved in cell cycle regulation of MCM-DH loading for DNA replication.
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae S288C; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2025-01-23
Authors: Miller, T.C.R., Lim, C.T., Diffley, J.F.X., Costa, A.
PDB entry 9i3k: Asymmetric cryo-EM reconstruction of the full-length E. coli transmembrane formate transporter FocA
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2025-01-23
Authors: Tueting, C., Janson, K., Kyrilis, F.L., Hamdi, F., Kastritis, P.L.
PDB entry 9i3l: Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA
Classification: RIBOSOME
Source organism: Dictyostelium discoideum; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-01-23
Authors: Mitropoulou, A., Wlodarski, T., Plessa, E., Cabrita, L.D., Christodoulou, J.
PDB entry 9i3m: Csu pilus rod antiparallel pair
Classification: CELL ADHESION
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.91 Å
Deposited: 2025-01-23
Authors: Malmi, H., Pakharukova, N., Zavialov, A.V.
PDB entry 9i3n: Csu pilus rod type 1 stack
Classification: CELL ADHESION
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.58 Å
Deposited: 2025-01-23
Authors: Malmi, H., Pakharukova, N., Zavialov, A.V.
PDB entry 9i3o: Csu pilus rod type 2 stack
Classification: CELL ADHESION
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2025-01-23
Authors: Malmi, H., Pakharukova, N., Zavialov, A.V.
PDB entry 9i3p: CryoEM structure of the Themis:Grb2 complex with bound ProMacrobody 256
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-01-23
Authors: Clancy, D.M., Felix, J., Bloch, Y., Savvides, S.N.
PDB entry 9i3q: Crystal structure of DNPH1 bound by compound 2.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.597 Å
Deposited: 2025-01-23
Authors: Collie, G.W.
PDB entry 9i3r: Human TRPM4 ion channel in MAASTY copolymer lipid nanodisc in a calcium-bound state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2025-01-23
Authors: Pugh, C.F., Feilen, L.P., Zivkovic, D., Praestegaard, K.F., Sideris, C., Borthwick, N.J., De Lichtenberg, C., Bolla, J.R., Autzen, A.A.A., Autzen, H.E.
PDB entry 9i3s: Photosynthetic A10B10 glyceraldehyde-3-phospahte dehydrogenase from Spinacia oleracea.
Classification: OXIDOREDUCTASE
Source organism: Spinacia oleracea
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.2 Å
Deposited: 2025-01-24
Authors: Marotta, R., Fermani, S., Sparla, F., Del Giudice, A.
PDB entry 9i3u: Cryo-EM structure of the AGR2 dimer in complex with the monomeric IRE1beta luminal domain
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-01-24
Authors: Yan, Y., Hardwick, S., Tung, J., Ron, D.
PDB entry 9i3v: Cryo-EM structure of the human LRP2 ectodomain
Classification: ENDOCYTOSIS
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2025-01-24
Authors: Ramanadane, K., Coscia, F.
PDB entry 9i3w: Structure of anti-EV71 human monoclonal antibody 16-2-8C Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i3x: Structure of anti-EV71 human monoclonal antibody 16-2-11B Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i3y: CRYSTAL STRUCTURE OF HUMAN MONOACYLGLYCEROL LIPASE WITH COMPOUND 17
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-01-24
Authors: Walter, A., Atz, K., Stenzhorn, Y., Nippa, D., Grether, U., Kuhn, B., Martin, R., Benz, J.
PDB entry 9i3z: Structure of anti-EV71 human monoclonal antibody 16-2-12D Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i40: Structure of anti-EV71 human monoclonal antibody 16-3-4D Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i41: Structure of anti-EV71 human monoclonal antibody 16-3-3C Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i42: Structure of anti-EV71 human monoclonal antibody 16-2-2D Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i43: Structure of anti-EV71 human monoclonal antibody 16-2-9D Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i44: Exonuclease domain of Machupo virus complexed with magnesium
Classification: VIRAL PROTEIN
Source organism: Mammarenavirus machupoense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.309 Å
Deposited: 2025-01-24
Authors: Degardin, M., Alvarez, K., Ferron, F.
PDB entry 9i45: Structure of anti-EV71 human monoclonal antibody 16-3-10B Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i4b: Structure of anti-EV71 human monoclonal antibody 17-2-12A Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i4c: Structure of anti-EV71 human monoclonal antibody 17-1-12A Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i4d: Structure of anti-EV71 human monoclonal antibody 17-2-2B Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i4e: Structure of anti-EV71 human monoclonal antibody 34-1-6D Fab
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2025-01-24
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 9i4f: Blood Type B-converting alpha-1,3-galactosidase PpaGal from Pedobacter panaciterrae in its apo form
Classification: HYDROLASE
Source organism: Pedobacter panaciterrae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2025-01-24
Authors: Schmoeker, O., Moeller, C., Terholsen, H., Girbardt, B., Palm, G.J., Hoppen, J., Lammers, M., Bornscheuer, U.T.
PDB entry 9i4g: Blood Type B-converting alpha-1,3-galactosidase PpaGal from Pedobacter panaciterrae in complex with D-galactose
Classification: HYDROLASE
Source organism: Pedobacter panaciterrae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2025-01-24
Authors: Schmoeker, O., Moeller, C., Terholsen, H., Girbardt, B., Palm, G.J., Hoppen, J., Lammers, M., Bornscheuer, U.T.
PDB entry 9i4h: Factor Inhibiting HIF (FIH) in complex with manganese and 3-Hydroxy-5-(3-(4-(hydroxymethyl)-3-nitrophenyl)isoxazol-5-yl)picolinoyl)glycine
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-01-24
Authors: Kaur, S., Zhang, X.J., Schofield, C.J.
PDB entry 9i4i: High resolution Cryo-EM structure of human complex I in mitochondria
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2025-01-24
Authors: Nguyen, M.D., Singh, V., Rorbach, J.
PDB entry 9i4j: X-ray structure of the drug binding domain of AlbA in complex with the KMR-04-161 compound of the pyrrolobenzodiazepines class
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella oxytoca
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2025-01-24
Authors: Di Palma, M., Steiner, R.A.
PDB entry 9i4n: Galectin-3 in Complex with Methyl 6-fluoro-N-acetyllactosaminide
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.069 Å
Deposited: 2025-01-25
Authors: Pachl, P.
PDB entry 9i4q: SSX structure of dye-type peroxidase DtpB from Streptomyces lividans
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2025-01-25
Authors: Smyth, P., Williams, L.J., Hough, M.A., Worrall, J.A.R., Owen, R.L.
PDB entry 9i4r: N-terminal Oic streptag II in Sav E44V-S45T-V47R-D67A-K121R variant
Classification: PROTEIN BINDING
Source organism: Streptomyces avidinii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2025-01-26
Authors: Wang, W., Lau, K., Pojer, F., Larabi, A.
PDB entry 9i4s: DtpB in complex with photocaged nitric oxide, 1.24 s, 64.4 microjoule, SSX
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-01-26
Authors: Smyth, P., Williams, L.J., Hough, M.A., Worrall, J.A.R., Owen, R.L.
PDB entry 9i4t: Photosystem II from Arabidopsis thaliana
Classification: PHOTOSYNTHESIS
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.44 Å
Deposited: 2025-01-26
Authors: Forsman, J.A., Graca, A.T., Hussein, R., Hall, M., Messinger, J., Schroder, W.P., Aydin, A.O.
PDB entry 9i4u: DtpB in complex with photocaged nitric oxide, 1.24 s, 32.2 microjoule, SSX
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-01-26
Authors: Smyth, P., Williams, L.J., Hough, M.A., Worrall, J.A.R., Owen, R.L.
PDB entry 9i4v: Crystal structure of the SARS-CoV-2 helicase NSP13
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2025-01-27
Authors: Kloskowski, P., Neumann, P., Ficner, R.
PDB entry 9i4w: Structure of carbamoylated recombinant human butyrylcholinesterase by the biscarbamte 5-(1-hydroxy-2-(piperidin-1-yl)ethyl)-1,3-phenylene bis(piperidine-1-carboxylate)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2025-01-27
Authors: Brazzolotto, X., Bosak, A., Nachon, F.
PDB entry 9i4x: Toxoplasma gondii cytochrome bc1 complex from the respiratory supercomplex III2-IV inhibited by atovaquone and ELQ-300
Classification: ELECTRON TRANSPORT
Source organism: Toxoplasma gondii GT1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2025-01-27
Authors: Maclean, A., Muhleip, A.
PDB entry 9i4z: Crystal structure of Thomasclavelia ramosa IgA peptidase (IgAse) active site mutant (E330-N876)
Classification: HYDROLASE
Source organism: Thomasclavelia ramosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-01-27
Authors: Ramirez-Larrota, J.S., Eckhard, U., Gomis-Ruth, F.X.
PDB entry 9i50: Crystal structure of feruloyl esterase from Fusarium oxysporum G122S variant
Classification: HYDROLASE
Source organism: Fusarium oxysporum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-01-27
Authors: Karampa, P., Dimarogona, M., Topakas, E., Makryniotis, K., Nikolaivits, E.
PDB entry 9i51: Crystal structure of the SARS-CoV-2 helicase NSP13 in complex with ADP
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2025-01-27
Authors: Kloskowski, P., Neumann, P., Ficner, R.
PDB entry 9i52: Dopamine 1 receptor:GaS complex bound to 19B
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-01-27
Authors: Clairfeuille, T., Rodriguez Sarmiento, R.M.
PDB entry 9i53: Crystal structure of the SARS-CoV-2 helicase NSP13 in complex with ATP
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2025-01-27
Authors: Kloskowski, P., Neumann, P., Ficner, R.
PDB entry 9i54: Dopamine 1 receptor:GaS complex bound to 24
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2025-01-27
Authors: Clairfeuille, T., Rodriguez Sarmiento, R.M.
PDB entry 9i55: Mouse phosphomannomutase 2 in complex with the activator glucose-1,6-bisphosphate
Classification: ISOMERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2025-01-27
Authors: Del Cano-Ochoa, F., Vilar, M., Vilas, A., Company, R., Perez, B., Ramon-Maiques, S.
PDB entry 9i56: CRYSTAL STRUCTURE OF HUMAN MONOACYLGLYCEROL LIPASE WITH COMPOUND 23
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2025-01-27
Authors: Walter, A., Atz, K., Stenzhorn, Y., Nippa, D., Grether, U., Kuhn, B., Martin, R., Benz, J.
PDB entry 9i57: Crystal structure of DNPH1 bound by compound 39.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.217 Å
Deposited: 2025-01-27
Authors: Collie, G.W.
PDB entry 9i58: Crystal structure of DNPH1 bound by compound 31.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.213 Å
Deposited: 2025-01-27
Authors: Collie, G.W.
PDB entry 9i59: RVFV GnH complexed with RVFV-379 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Rift Valley fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2025-01-27
Authors: Paesen, G.C., Bowden, T.A.
PDB entry 9i5a: Crystal structure of wild type perlecan region 3 construct I876-V1272 construct including one laminin IV-like and four laminin EGF-like domains.
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.045 Å
Deposited: 2025-01-27
Authors: Sohail, A.A., Koski, M.K., Ruddock, L.R.
PDB entry 9i5b: Crystal structure of perlecan region 3 mutant (P1019L) construct I876-V1272 including one laminin IV-like and four laminin EGF-like domains.
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2025-01-27
Authors: Sohail, A.A., Koski, M.K., Ruddock, L.R.
PDB entry 9i5c: Inner layer protein P1 chains in transcribing particles of bacteriophage phi6
Classification: VIRAL PROTEIN
Source organism: Cystovirus phi6
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2025-01-28
Authors: Kumpula, E.-P., Ilca, S.L., Huiskonen, J.T.
PDB entry 9i5e: A Coiled Coil Module Strategy for High-Resolution Cryo-EM Structures of Small Proteins for Drug Discovery
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2025-01-28
Authors: Samson, C., Dossou, I., Steinmetz, A., Kumar, A., Mathieu, M., Rak, A.
PDB entry 9i5f: Glyceraldehyde 3-phosphate dehydrogenase A (GAPDHA) NAD holoenzyme, from Helicobacter pylori
Classification: OXIDOREDUCTASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 1.162 Å
Deposited: 2025-01-28
Authors: Foster, S.P., Moody, P.C.E.
PDB entry 9i5h: Structure of the bacterial archaellum from L. aerophila
Classification: PROTEIN FIBRIL
Source organism: Litorilinea aerophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-01-28
Authors: Sivabalasarma, S., Taib, N., Mollat, C.L., Joest, M., Steimle, S., Gribaldo, S., Albers, S.-V.
PDB entry 9i5i: PR1 phage heterodimeric DNA ligase in complex with 21-mer nicked DNA (random sequence)
Classification: DNA BINDING PROTEIN
Source organism: Providencia phage vB_PreS_PR1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2025-01-28
Authors: Richardson, J.M., MacNeill, S.A.
PDB entry 9i5j: CRYSTAL STRUCTURE OF HUMAN MONOACYLGLYCEROL LIPASE WITH COMPOUND 27
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2025-01-28
Authors: Walter, A., Atz, K., Stenzhorn, Y., Nippa, D., Grether, U., Kuhn, B., Martin, R., Benz, J.
PDB entry 9i5k: Structure of the Chaetomium thermophilum Pmt4 homodimer (C2 symmetry)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-01-28
Authors: McDowell, M.A., Wild, K., Sinning, I.
PDB entry 9i5l: Structure of the Chaetomium thermophilum Pmt4 homodimer (C1 symmetry)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-01-28
Authors: McDowell, M.A., Wild, K., Sinning, I.
PDB entry 9i5m: Structure of cyclodipeptide synthase from Nocardia brasiliensis (Nbra-CDPS)
Classification: RNA BINDING PROTEIN
Source organism: Nocardia brasiliensis ATCC 700358
Experimental method: X-RAY DIFFRACTION
Resolution: 1.734 Å
Deposited: 2025-01-28
Authors: Marouf, F.Z., Charbonnier, J.B., Fernandez Varela, P.
PDB entry 9i5n: Single particle cryo electron microscopy of a Fab fragment bound to recombinant human CD40 ligand
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-01-28
Authors: Kristoffersen, E.L., Schinkel, T., Andersen, E.S.
PDB entry 9i5o: Recombinant human butyrylcholinesterase in complex with 1-(cyclohexylmethyl)-5-(2,4-difluorobenzyl)-N-(2-(dimethylamino)ethyl)-1H-indazole-6-carboxamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2025-01-28
Authors: Brazzolotto, X., Ferjancic Benetik, S., Knez, D., Proj, M., Gobec, S., Nachon, F.
PDB entry 9i5p: Recombinant human butyrylcholinesterase in complex with 1-(isobutylmethyl)-5-(2,4-difluorobenzyl)-N-(2-(dimethylamino)ethyl)-1H-indazole-6-carboxamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2025-01-28
Authors: Brazzolotto, X., Ferjancic Benetik, S., Knez, D., Proj, M., Gobec, S., Nachon, F.
PDB entry 9i5q: Recombinant human butyrylcholinesterase in complex with 2-(cyclohexylmethyl)-5-(2,4-difluorophenoxy)-N-(2-(3-(methoxymethyl)piperidin-1-yl)ethyl)-2H-indazole-6-carboxamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2025-01-28
Authors: Brazzolotto, X., Ferjancic Benetik, S., Knez, D., Proj, M., Gobec, S., Nachon, F.
PDB entry 9i5r: Interactions between Pex3 and Pex19 peptide in yeast
Classification: PROTEIN TRANSPORT
Source organism: Ogataea angusta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2025-01-28
Authors: de Lange, E., Chojnowski, G., Burgi, J., Vlijm, R., Wilmanns, M., van der Klei, I.
PDB entry 9i5s: Solution structure of an intramolecular anti-parallel G-quadruplex with a 5'-end overhang.
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2025-01-28
Authors: Avendano Avila, C., Heddi, B.
PDB entry 9i5t: 50S subunit of P. gingivalis ribosome with Lefamulin
Classification: RIBOSOME
Source organism: Porphyromonas gingivalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-01-28
Authors: Hiregange, D.G., Bashan, A., Yonath, A.
PDB entry 9i5v: 70S P. gingivalis ribosome erm-delta-porN strain
Classification: RIBOSOME
Source organism: Porphyromonas gingivalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-01-28
Authors: Hiregange, D.G., Bashan, A., Yonath, A.
PDB entry 9i5w: Structure of mature Activin A from DMSO solvent optimisation of XChem fragment screen
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.774 Å
Deposited: 2025-01-28
Authors: Quambusch, L., Hyvonen, M.
PDB entry 9i5x: Porphyromonas gingivalis 70S ribosome (W83 Strain)
Classification: RIBOSOME
Source organism: Porphyromonas gingivalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-01-28
Authors: Hiregange, D.G., Bashan, A., Yonath, A.
PDB entry 9i5y: Crystal structure of ADP-bound BiP ATPase domain in complex with CDNF C-terminal domain
Classification: CHAPERONE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-01-29
Authors: Fudo, S., Shpironok, O., Saarma, M., Kajander, T.
PDB entry 9i5z: Upregulated state of BetP in potassium
Classification: TRANSPORT PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2025-01-29
Authors: Urbansky, K., Fu, L., Madej, M.G., Horn, G., Ziegler, C.
PDB entry 9i60: Transient activated state of BetP
Classification: TRANSPORT PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2025-01-29
Authors: Urbansky, K., Fu, L., Madej, M.G., Ziegler, C.
PDB entry 9i61: Transient activated state of BetP in complex with betaine
Classification: TRANSPORT PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2025-01-29
Authors: Urbansky, K., Fu, L., Madej, M.G., Ziegler, C.
PDB entry 9i62: CryoEM structure of a RAD51 D-loop
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2025-01-29
Authors: Pellegrini, L., Joudeh, L., Appleby, R.E.
PDB entry 9i63: Synthetic Human Saposin D glycoprotein
Classification: LIPID BINDING PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-01-29
Authors: Weyand, M., Unverzagt, C.
PDB entry 9i64: Crystal structure of Casdatifan bound to HIF2a-B*:ARNT-B* complex
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.558 Å
Deposited: 2025-01-29
Authors: Walker, N.P., Lawson, K.V.
PDB entry 9i65: Recombinant F-ENA-2 fibers
Classification: PROTEIN FIBRIL
Source organism: Cohnella sp. OV330
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2025-01-29
Authors: Sleutel, M., Remaut, H.
PDB entry 9i66: Downregulated state of the betaine transporter BetP
Classification: TRANSPORT PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2025-01-29
Authors: Heinz, V., Urbansky, K., Fu, L., Madej, M.G., Ziegler, C.
PDB entry 9i67: StmPr1, Stenotrophomonas maltophilia Protease 1, 36 kDa alkine serine protease in complex with Chymostatin
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2025-01-29
Authors: Sommer, M., Outzen, L., Negm, A., Windhorst, S., Weber, W., Betzel, C.
PDB entry 9i68: Crystal structure of human Cdc20 bound to synthetic D-box peptide D21
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.505 Å
Deposited: 2025-01-29
Authors: Eapen, R., Okoye, C., Stubbs, C., Schimpl, M., Tischer, T., Fisher, E.J., Zacharopoulou, M., Ferrer, F., Barford, D., Spring, D., Lindon, C., Phillips, C., Itzhaki, L.S.
PDB entry 9i69: Crystal structure of human Cdc20 bound to synthetic D-box peptide D20
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.463 Å
Deposited: 2025-01-29
Authors: Eapen, R., Okoye, C., Stubbs, C., Schimpl, M., Tischer, T., Fisher, E.J., Zacharopoulou, M., Ferrer, F., Barford, D., Spring, D., Lindon, C., Phillips, C., Itzhaki, L.S.
PDB entry 9i6a: Crystal structure of human Cdc20 bound to synthetic D-box peptide D7
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.915 Å
Deposited: 2025-01-29
Authors: Eapen, R., Okoye, C., Stubbs, C., Schimpl, M., Tischer, T., Fisher, E.J., Zacharopoulou, M., Ferrer, F., Barford, D., Spring, D., Lindon, C., Phillips, C., Itzhaki, L.S.
PDB entry 9i6b: CryoEM structure of the Chaetomium thermophilum TOM core complex at 2.7 angstrom resolution (pALDH treated)
Classification: MEMBRANE PROTEIN
Source organism: Thermochaetoides thermophila DSM 1495
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-01-29
Authors: Agip, A.N.A., Ornelas, P., Yang, T.J., Ermanno, U., Haeder, S., McDowell, M.A., Kuehlbrandt, W.
PDB entry 9i6c: StmPr1, Stenotrophomonas maltophilia Protease 1, 36 kDa alkine serine protease in complex with Leupeptin
Classification: HYDROLASE
Source organism: Stenotrophomonas maltophilia; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2025-01-29
Authors: Sommer, M., Outzen, L., Negm, A., Windhorst, S., Weber, W., Betzel, C.
PDB entry 9i6d: Glutamate transporter homologue GltPh mutant P206R in Complex with L-Aspartate and Sodium Ions in Salipro
Classification: MEMBRANE PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2025-01-29
Authors: Horn, G., Overa, C., Fu, L., Urbansky, K., Madej, M.G., Ziegler, C.
PDB entry 9i6e: Crystal structure of DNPH1 bound by compound 5.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.489 Å
Deposited: 2025-01-29
Authors: Collie, G.W.
PDB entry 9i6f: Cryo-EM structure of HIGD2A bound complex IV
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2025-01-30
Authors: Nguyen, M.D., Rorbach, J., Singh, V.
PDB entry 9i6g: DtpB in complex with photocaged nitric oxide, 1.24 s, 16.1 microjoule, SSX
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-01-30
Authors: Smyth, P., Williams, L.J., Hough, M.A., Worrall, J.A.R., Owen, R.L.
PDB entry 9i6h: Room temperature structure of KR2 rhodopsin in pentameric form at 95% relative humidity
Classification: MEMBRANE PROTEIN
Source organism: Dokdonia eikasta
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-01-30
Authors: Zabelskii, D., Round, E., Han, H., von Stetten, D., Melo, D., de Wijn, R., Bean, R., Round, A.
PDB entry 9i6i: Room-temperature structure of KR2 rhodopsin in pentameric form at 85% relative humidity
Classification: MEMBRANE PROTEIN
Source organism: Dokdonia eikasta
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-01-30
Authors: Zabelskii, D., Round, E., Han, H., von Stetten, D., Melo, D., de Wijn, R., Bean, R., Round, A.
PDB entry 9i6j: Hen egg-white lysozyme structure embedded in LCP medium at 95% relative humidity
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-01-30
Authors: Zabelskii, D., Round, E., Han, H., von Stetten, D., Melo, D., de Wijn, R., Round, A.
PDB entry 9i6k: Hen egg-white lysozyme structure at 85% relative humidity
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-01-30
Authors: Zabelskii, D., Round, E., Han, H., von Stetten, D., Melo, D., de Wijn, R., Round, A.
PDB entry 9i6l: Hen egg-white lysozyme structure at 75% relative humidity
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-01-30
Authors: Zabelskii, D., Round, E., Han, H., von Stetten, D., Melo, D., de Wijn, R., Round, A.
PDB entry 9i6m: Hen egg-white lysozyme structure at 65% relative humidity
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-01-30
Authors: Zabelskii, D., Round, E., Han, H., von Stetten, D., Melo, D., de Wijn, R., Bean, R., Round, A.