LiteFold/PDB huggingface dataset:
PDB entry 5kee: Crystal structure of Staphylococcal nuclease variant Delta+PHS L25K/I92F at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-06-09
Authors: Skerritt, L.A., Caro, J.A., Heroux, A., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 5kef: Structure of hypothetical Staphylococcus protein SA0856 with zinc
Classification: METAL BINDING PROTEIN
Source organism: Staphylococcus aureus subsp. aureus CN1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2016-06-09
Authors: Battaile, K.P., Chirgadze, Y.N., Lam, R., Chan, T., Mihajlovic, V., Romanov, V., Pai, E., Mendez, V., Chirgadze, N.Y.
PDB entry 5keg: Crystal structure of APOBEC3A in complex with a single-stranded DNA
Classification: HYDROLASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-06-09
Authors: Kouno, T., Hilbert, B.J., Silvas, T., Royer, W.E., Matsuo, H., Schiffer, C.A.
PDB entry 5keh: Truncated hemolysin A from P. mirabilis at 2.0 Angstroms resolution crystallized in a high salt condition
Classification: TOXIN
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.551 Å
Deposited: 2016-06-09
Authors: Novak, W.R.P., Bhattacharyya, B., Weaver, T.M.
PDB entry 5kei: Mycobacterium smegmatis MbtA apo structure
Classification: LIGASE
Source organism: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.325 Å
Deposited: 2016-06-09
Authors: Favrot, L., Vergnolle, O., Blanchard, J.S.
PDB entry 5kej: Crystallographic structure of the Tau class glutathione S-transferase MiGSTU in complex with S-hexyl-glutathione
Classification: TRANSFERASE
Source organism: Mangifera indica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2016-06-09
Authors: Valenzuela-Chavira, I., Serrano-Posada, H., Lopez-Zavala, A., Hernandez-Paredes, J., Sotelo-Mundo, R.
PDB entry 5kek: Structure Determination of a Self-Assembling DNA Crystal
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.098 Å
Deposited: 2016-06-09
Authors: Simmons, C.R., Birktoft, J.J., Seeman, N.C., Yan, H.
PDB entry 5kel: EBOV GP in complex with variable Fab domains of IgGs c2G4 and c13C6
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Zaire ebolavirus; Zaire ebolavirus (strain Mayinga-76)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2016-06-09
Authors: Pallesen, J., Murin, C.D., de Val, N., Cottrell, C.A., Hastie, K.M., Turner, H.L., Fusco, M.L., Flyak, A.I., Zeitlin, L., Crowe Jr., J.E., Andersen, K.G., Saphire, E.O., Ward, A.B.
PDB entry 5kem: EBOV sGP in complex with variable Fab domains of IgGs c13C6 and BDBV91
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Zaire ebolavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.5 Å
Deposited: 2016-06-09
Authors: Pallesen, J., Murin, C.D., de Val, N., Cottrell, C.A., Hastie, K.M., Turner, H.L., Fusco, M.L., Flyak, A.I., Zeitlin, L., Crowe Jr., J.E., Andersen, K.G., Saphire, E.O., Ward, A.B.
PDB entry 5ken: EBOV GP in complex with variable Fab domains of IgGs c4G7 and c13C6
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Zaire ebolavirus; Zaire ebolavirus (strain Mayinga-76)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2016-06-09
Authors: Pallesen, J., Murin, C.D., de Val, N., Cottrell, C.A., Hastie, K.M., Turner, H.L., Fusco, M.L., Flyak, A.I., Zeitlin, L., Crowe Jr., J.E., Andersen, K.G., Saphire, E.O., Ward, A.B.
PDB entry 5keo: Structure Determination of a Self-Assembling DNA Crystal
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2016-06-09
Authors: Simmons, C.R., Birktoft, J.J., Seeman, N.C., Yan, H.
PDB entry 5kep: High resolution cryo-EM maps of Human Papillomavirus 16 reveal L2 location and heparin-induced conformational changes
Classification: VIRUS LIKE PARTICLE
Source organism: Human papillomavirus type 16
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2016-06-10
Authors: Guan, J., Bywaters, S.M., Brendle, S.A., Ashley, R.E., Makhov, A.M., Conway, J.F., Christensen, N.D., Hafenstein, S.
PDB entry 5keq: High resolution cryo-EM maps of Human papillomavirus 16 reveal L2 location and heparin-induced conformational changes
Classification: VIRUS LIKE PARTICLE
Source organism: Human papillomavirus type 16
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2016-06-10
Authors: Guan, J., Bywaters, S.M., Brendle, S.A., Ashley, R.E., Makhov, A.M., Conway, J.F., Christensen, N.D., Hafenstein, S.
PDB entry 5ker: Deer mouse recombinant hemoglobin from high altitude species
Classification: TRANSPORT PROTEIN
Source organism: Peromyscus maniculatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.202 Å
Deposited: 2016-06-10
Authors: Inoguchi, N., Natarajan, C., Storz, J.F., Moriyama, H.
PDB entry 5kes: Solution structure of the yeast Ddi1 HDD domain
Classification: UNKNOWN FUNCTION
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR
Deposited: 2016-06-10
Authors: Trempe, J.-F., Ratcliffe, C., Veverka, V., Saskova, K., Gehring, K.
PDB entry 5ket: Structure of the aldo-keto reductase from Coptotermes gestroi
Classification: OXIDOREDUCTASE
Source organism: Coptotermes gestroi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2016-06-10
Authors: Liberato, M.L., Campos, B.M., Tramontina, R., Squina, F.M.
PDB entry 5keu: Crystal Structure of a Taurine Dioxygenase from Burkholderia xenovorans
Classification: OXIDOREDUCTASE
Source organism: Burkholderia xenovorans (strain LB400)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-06-10
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5kev: Vibrio parahaemolyticus VtrA/VtrC complex
Classification: SIGNALING PROTEIN
Source organism: Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-06-10
Authors: Tomchick, D.R., Orth, K., Rivera-Cancel, G.
PDB entry 5kew: Vibrio parahaemolyticus VtrA/VtrC complex bound to the bile salt taurodeoxycholate
Classification: SIGNALING PROTEIN
Source organism: Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.103 Å
Deposited: 2016-06-10
Authors: Tomchick, D.R., Orth, K., Rivera-Cancel, G.
PDB entry 5kez: Selective and potent inhibition of the glycosidase human amylase by the short and extremely compact peptide piHA from mRNA display
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2016-06-10
Authors: Caner, S., Brayer, G.D.
PDB entry 5kf0: Crystal structure of an Aldedhyde dehydrogenase from Burkholderia vietnamiensis
Classification: OXIDOREDUCTASE
Source organism: Burkholderia vietnamiensis (strain G4 / LMG 22486)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-06-10
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5kf1: X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum, apo form, pH 5
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-06-11
Authors: Holden, H.M., Thoden, J.B., Dopkins, B.J., tipton, P.A.
PDB entry 5kf2: X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum, apo form, pH 8
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-06-11
Authors: Holden, H.M., Thoden, J.B., Dopkins, B.J., Tipton, P.A.
PDB entry 5kf3: Truncated hemolysin A from P. mirabilis Y134A at 2.2 Angstroms resolution
Classification: TOXIN
Source organism: Proteus mirabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-06-11
Authors: Novak, W.R.P., Bhattacharyya, B., Weaver, T.M.
PDB entry 5kf4: Crystal structure of FN3 domain (Residues P368-P466) of Human collagen XX
Classification: CONTRACTILE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-06-12
Authors: Xie, Y., Cheng, Z., Zhao, J.
PDB entry 5kf6: Structure of proline utilization A from Sinorhizobium meliloti complexed with L-tetrahydrofuroic acid and NAD+ in space group P21
Classification: OXIDOREDUCTASE
Source organism: Sinorhizobium meliloti (strain SM11)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-06-12
Authors: Tanner, J.J.
PDB entry 5kf7: Structure of proline utilization A from Sinorhizobium meliloti complexed with L-tetrahydrofuroic acid and NAD+ in space group P3121
Classification: OXIDOREDUCTASE
Source organism: Sinorhizobium meliloti (strain SM11)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-06-12
Authors: Tanner, J.J.
PDB entry 5kf8: X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum in complex with glucosamine
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-06-12
Authors: Holden, H.M., Thoden, J.B., Dopkins, B.J., Tipton, P.A.
PDB entry 5kf9: X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum in complex with N-acetylglucosamine
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2016-06-12
Authors: Dopkins, B.J., Thoden, J.B., Holden, H.M., Tipton, P.A.
PDB entry 5kfa: Human DNA polymerase eta-DNA ternary complex: ground state at pH7.0 (K+ MES) with 1 Ca2+ ion
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfb: Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 90s
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfc: Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 180s
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfd: Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 300s
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfe: Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 600s
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kff: Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 1800s
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfg: Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 30s
Classification: replication, transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfh: Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 90s
Classification: replication, transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfi: Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 120s
Classification: replication, transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfj: Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 180s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfk: Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 300s
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfl: Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 600s
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfm: Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: ground state at pH7.0 (K+ MES) with 1 Ca2+ ion
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfn: Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 1 mM Mg2+ for 1800s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfo: Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 1 mM Mn2+ for 1800s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfp: Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 20 mM Mg2+ for 600s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfq: Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 10 mM Mn2+ for 600s
Classification: replication, transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfr: Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 20 mM Mn2+ for 600s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfs: Human DNA polymerase eta R61A-DNA ternary complex: ground state at pH7.0 (K+ MES) with 1 Ca2+ ion
Classification: replication, transferase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kft: Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 40s
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfu: Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 80s
Classification: REPLICATION, TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfv: Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 140s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfw: Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 200s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfx: Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 300s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfy: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 4 degree
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kfz: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 14 degree
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kg0: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 22 degree
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kg1: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 30 degree
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kg2: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 37 degree
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kg3: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Mn2+ for 60s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kg4: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Mg2+ for 60s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kg5: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Cd2+ for 60s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kg6: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Ca2+ for 60s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kg7: Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Zn2+ for 60s
Classification: replication, transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2016-06-12
Authors: Gao, Y., Yang, W.
PDB entry 5kg8: Rigor myosin X co-complexed with an actin filament
Classification: MOTOR PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.1 Å
Deposited: 2016-06-12
Authors: Sindelar, C.V., Houdusse, A., Sweeney, L.
PDB entry 5kg9: Crystal structure of the gp120 v2 antibody RE505-22 Fab from IGH- and IGK-humanized mouse
Classification: IMMUNE SYSTEM
Source organism: Mus musculus, Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-06-13
Authors: Nicely, N.I.
PDB entry 5kga: X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum, mutant D287N, in complex with N-acetylglucosamine
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-06-13
Authors: Dopkins, B.J., Thoden, J.B., Tipton, P.A., Holden, H.M.
PDB entry 5kgd: Crystal structure of PIM1 with inhibitor: 2-pyridin-3-yl-1~{H}-benzimidazole
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2016-06-13
Authors: Ferguson, A.D.
PDB entry 5kge: Crystal structure of PIM1 with inhibitor: 5-(3,4-dichlorophenyl)-1~{H}-pyrazol-3-amine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2016-06-13
Authors: Ferguson, A.D.
PDB entry 5kgf: Structural model of 53BP1 bound to a ubiquitylated and methylated nucleosome, at 4.5 A resolution
Classification: STRUCTURAL PROTEIN/DNA
Source organism: Homo sapiens; synthetic construct; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.54 Å
Deposited: 2016-06-13
Authors: Wilson, M.D., Benlekbir, S., Sicheri, F., Rubinstein, J.L., Durocher, D.
PDB entry 5kgg: Crystal structure of PIM1 with inhibitor: 2-(5-chloranyl-1~{H}-indol-3-yl)ethanamine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-06-13
Authors: Ferguson, A.D.
PDB entry 5kgh: X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum, mutant Y297F
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-06-13
Authors: Dopkins, B.J., Thoden, J.B., Tipton, P.A., Holden, H.M.
PDB entry 5kgi: Crystal structure of PIM1 with inhibitor 2-[3,4-bis(chloranyl)phenoxy]ethanamine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2016-06-13
Authors: Ferguson, A.D.
PDB entry 5kgj: X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum in complex with galactosamine
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-06-13
Authors: Dopkins, B.J., Thoden, J.B., Tipton, P.A., Holden, H.M.
PDB entry 5kgk: Crystal structure of PIM1 with inhibitor: 3-(4-methoxyphenyl)-1~{H}-pyrazol-5-amine
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2016-06-13
Authors: Ferguson, A.D.
PDB entry 5kgl: 2.45A resolution structure of Apo independent phosphoglycerate mutase from C. elegans (orthorhombic form)
Classification: ISOMERASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2016-06-13
Authors: Lovell, S., Mehzabeen, N., Battaile, K.P., Yu, H., Dranchak, P., MacArthur, R., Li, Z., Carlow, T., Suga, H., Inglese, J.
PDB entry 5kgm: 2.95A resolution structure of Apo independent phosphoglycerate mutase from C. elegans (monoclinic form)
Classification: ISOMERASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2016-06-13
Authors: Lovell, S., Mehzabeen, N., Battaile, K.P., Yu, H., Dranchak, P., MacArthur, R., Li, Z., Carlow, T., Suga, H., Inglese, J.
PDB entry 5kgn: 1.95A resolution structure of independent phosphoglycerate mutase from C. elegans in complex with a macrocyclic peptide inhibitor (2d)
Classification: ISOMERASE
Source organism: Caenorhabditis elegans; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-06-13
Authors: Lovell, S., Mehzabeen, N., Battaile, K.P., Yu, H., Dranchak, P., MacArthur, R., Li, Z., Carlow, T., Suga, H., Inglese, J.
PDB entry 5kgo: Structure of K. pneumonia MrkH-c-di-GMP complex
Classification: DNA BINDING PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2016-06-13
Authors: Schumacher, M.
PDB entry 5kgp: X-ray structure of a glucosamine N-Acetyltransferase from Clostridium acetobutylicum in complex with chitosan
Classification: TRANSFERASE
Source organism: Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-06-13
Authors: Dopkins, B.J., Thoden, J.B., Tipton, P.A., Holden, H.M.
PDB entry 5kgq: NMR structure and dynamics of Q4DY78, a conserved kinetoplasid-specific protein from Trypanosoma cruzi
Classification: UNKNOWN FUNCTION
Source organism: Trypanosoma cruzi
Experimental method: SOLUTION NMR
Deposited: 2016-06-13
Authors: D'Andrea, E.D., Retel, J.S., Diehl, A., Schmieder, P., Oschkinat, H., Pires, J.R.
PDB entry 5kgr: Spin-Labeled T4 Lysozyme Construct I9V1/V131V1 (30 days)
Classification: HYDROLASE
Source organism: Enterobacteria phage T4 sensu lato
Experimental method: X-RAY DIFFRACTION
Resolution: 1.473 Å
Deposited: 2016-06-13
Authors: Balo, A.R., Feyrer, H., Ernst, O.P.
PDB entry 5kgs: Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with an inhibitor optimized from HTS lead: 5-[4-(1,3-benzodioxol-5-ylcarbonyl)piperazin-1-yl]-2,3-dihydroinden-1-one
Classification: Transferase/Transferase inhibitor
Source organism: Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-06-13
Authors: Maize, K.M., Aldrich, C.C., Finzel, B.C.
PDB entry 5kgt: Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with an inhibitor optimized from HTS lead: 1-[4-[4-(3-chlorophenyl)carbonylpiperidin-1-yl]phenyl]ethanone
Classification: Transferase/Transferase inhibitor
Source organism: Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2016-06-13
Authors: Maize, K.M., Divakaran, A., Aldrich, C.C., Finzel, B.C.
PDB entry 5kgu: Crystal structure of Staphylococcal nuclease variant Delta+PHS N118D at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-06-13
Authors: Skerritt, L.A., Robinson, A.C., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 5kgv: Structural impact of single ribonucleotides in DNA
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-06-13
Authors: Evich, M., Spring-Connell, A.M., Storici, F.
PDB entry 5kgw: HIV1 catalytic core domain in complex with inhibitor: (2~{S})-2-[3-(3,4-dihydro-2~{H}-chromen-6-yl)-1-methyl-indol-2-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2016-06-13
Authors: Feng, L., Kobe, M., Kvaratskhelia, M.
PDB entry 5kgx: HIV1 catalytic core domain in complex with an inhibitor (2~{S})-2-[3-(3,4-dihydro-2~{H}-chromen-6-yl)-1-methyl-indol-2-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2016-06-13
Authors: Feng, L., Kobe, M., Kvaratskhelia, M.
PDB entry 5kgy: Phenol-soluble modulin Alpha 3
Classification: STRUCTURE FROM CYANA 2.1
Experimental method: SOLUTION NMR
Deposited: 2016-06-13
Authors: Towle, K.M., Lohans, C.T., Acedo, J.Z., Van Belkum, M.J., Miskolzie, M., Vederas, J.C.
PDB entry 5kgz: Phenol-soluble modulin Beta2
Classification: Virulence Factor
Source organism: Staphylococcus aureus
Experimental method: SOLUTION NMR
Deposited: 2016-06-13
Authors: Towle, K.M., Lohans, C.T., Acedo, J.Z., Van Belkum, M.J., Miskolzie, M., Vederas, J.C.
PDB entry 5kh0: Crystal Structure of HydF from thermosipho melanesiensis in complex with a [4Fe-4S] cluster
Classification: OXIDOREDUCTASE
Source organism: Thermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-06-14
Authors: Caserta, G., Pecqueur, L., Fontecave, M.
PDB entry 5kh1: Shigella flexneri Effector IpaH1880
Classification: LIGASE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2016-06-14
Authors: Nishide, A., Mizushima, T.
PDB entry 5kh2: Crystal Structure of Steptococcus pneumoniae Undecaprenyl pyrophosphate Synthase (UPPS)
Classification: TRANSFERASE
Source organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-06-14
Authors: Concha, N.O.
PDB entry 5kh3: Crystal structure of fragment (3-(5-Chloro-1,3-benzothiazol-2-yl)propanoic acid) bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-06-14
Authors: Harding, R.J., Dong, A., Ravichandran, M., Ferreira de Freitas, R., Schapira, M., Bountra, C., Edwards, A.M., Santhakumar, V., Arrowsmith, C.M., Structural Genomics Consortium (SGC)
PDB entry 5kh4: Crystal Structure of Steptococcus pneumoniae Undecaprenyl pyrophosphate Synthase (UPPS) with FARNESYL DIPHOSPHATE
Classification: TRANSFERASE
Source organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2016-06-14
Authors: Concha, N.O.
PDB entry 5kh5: Crystal Structure of Steptococcus pneumoniae Undecaprenyl pyrophosphate Synthase (UPPS) IN COMPLEX WITH ~{N}-(3-azanyl-3-oxidanylidene-propyl)-5-(1-benzothiophen-5-yl)-1-(phenylmethyl)-~{N}-[(4-propan-2-yloxyphenyl)methyl]pyrazole-4-carboxamide
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2016-06-14
Authors: Concha, N.O.
PDB entry 5kh6: SETDB1 in complex with a fragment candidate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2016-06-14
Authors: Walker, J.R., Harding, R.J., Mader, P., Dobrovetsky, E., Dong, A., Collins, P., Pearce, N., Brandao-Neto, J., Douangamath, A., von Delft, F., Brown, P.J., Schapira, M., Arrowsmith, C.H., Edwards, A.M., Santhakumar, V., Structural Genomics Consortium (SGC)
PDB entry 5kh7: Crystal structure of fragment (3-[6-Oxo-3-(3-pyridinyl)-1(6H)-pyridazinyl]propanoic acid) bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-06-14
Authors: Harding, R.J., Walker, J., Ravichandran, M., Ferreira de Freitas, R., Schapira, M., Bountra, C., Edwards, A.M., Santhakumar, V., Arrowsmith, C.M., Structural Genomics Consortium (SGC)
PDB entry 5kh8: Solution structures of the apo state fluoride riboswitch
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2016-06-14
Authors: Zhang, Q., Zhao, B.
PDB entry 5kh9: Crystal structure of a low occupancy fragment candidate (5-[(4-Isopropylphenyl)amino]-6-methyl-1,2,4-triazin-3(2H)-one) bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2016-06-14
Authors: Harding, R.J., Tempel, W., Ravichandran, M., Collins, P., Pearce, N., Brandao-Neto, J., Douangamath, A., Schapira, M., Bountra, C., Edwards, A.M., von Delft, F., Santhakumar, V., Arrowsmith, C.M., Structural Genomics Consortium (SGC)
PDB entry 5kha: Structure of glutamine-dependent NAD+ synthetase from Acinetobacter baumannii in complex with adenosine diphosphate (ADP)
Classification: LIGASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-06-14
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5khb: Structure of Phenol-soluble modulin Alpha1
Classification: SIGNALING PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2016-06-14
Authors: Towle, K.M., Lohans, C.T., Acedo, J.Z., Miskolzie, M., van Belkum, M.J., Vederas, J.C.
PDB entry 5khc: Structure of rubella virus E1 glycoprotein ectodomain fitted into sub-tomogram averaged surface spike density of rubella virus
Classification: VIRAL PROTEIN
Source organism: Rubella virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 11.1 Å
Deposited: 2016-06-14
Authors: Mangala Prasad, V., Klose, T., Rossmann, M.G.
PDB entry 5khd: Structure of 1.75 A BldD C-domain-c-di-GMP complex
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7501 Å
Deposited: 2016-06-14
Authors: Schumacher, M.
PDB entry 5khe: Fitted structure of rubella virus capsid protein
Classification: VIRAL PROTEIN
Source organism: Rubella virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 35 Å
Deposited: 2016-06-14
Authors: Mangala Prasad, V., Klose, T., Rossmann, M.G.
PDB entry 5khf: Fitted structure of rubella virus capsid protein
Classification: VIRAL PROTEIN
Source organism: Rubella virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 35 Å
Deposited: 2016-06-14
Authors: Mangala Prasad, V., Klose, T., Rossmann, M.G.
PDB entry 5khg: HCN2 CNBD in complex with cytidine-3', 5'-cyclic monophosphate (cCMP)
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.241 Å
Deposited: 2016-06-14
Authors: Ng, L.C.T., Putrenko, I., Baronas, V., Van Petegem, F., Accili, E.A.
PDB entry 5khh: HCN2 CNBD in complex with inosine-3', 5'-cyclic monophosphate (cIMP)
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2016-06-14
Authors: Ng, L.C.T., Putrenko, I., Baronas, V., Van Petegem, F., Accili, E.A.
PDB entry 5khi: HCN2 CNBD in complex with purine riboside-3', 5'-cyclic monophosphate (cPuMP)
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-06-14
Authors: Ng, L.C.T., Putrenko, I., Baronas, V., Van Petegem, F., Accili, E.A.
PDB entry 5khj: HCN2 CNBD in complex with uridine-3', 5'-cyclic monophosphate (cUMP)
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2016-06-14
Authors: Ng, L.C.T., Putrenko, I., Baronas, V., Van Petegem, F., Accili, E.A.
PDB entry 5khk: HCN2 CNBD in complex with 2-aminopurine riboside-3', 5'-cyclic monophosphate (2-NH2-cPuMP)
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2016-06-14
Authors: Ng, L.C.T., Putrenko, I., Baronas, V., Van Petegem, F., Accili, E.A.
PDB entry 5khl: Crystal Structure of periplasmic Heme binding protein HutB of Vibrio cholerae
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.397 Å
Deposited: 2016-06-15
Authors: Agarwal, S., Dey, S., Ghosh, B., Dasgupta, J.
PDB entry 5khm: The first BET bromodomain of BRD4 bound to compound 13 in a bivalent manner
Classification: Transcription Factor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2016-06-15
Authors: Patel, J.
PDB entry 5khn: Crystal structures of the Burkholderia multivorans hopanoid transporter HpnN
Classification: MEMBRANE PROTEIN
Source organism: Burkholderia multivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.445 Å
Deposited: 2016-06-15
Authors: Su, C.-C., Yu, E.W.
PDB entry 5kho: Rasip1 RA domain in complex with Rap1B
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2016-06-15
Authors: Gingras, A.R.
PDB entry 5khp: Tightening the Recognition of Tetravalent Zr and Th Complexes by the Siderophore-Binding Mammalian Protein Siderocalin for Theranostic Applications
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2016-06-15
Authors: Rupert, P.B., Strong, R.K.
PDB entry 5khq: Rasip1 RA domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-06-15
Authors: Gingras, A.R.
PDB entry 5khr: Model of human Anaphase-promoting complex/Cyclosome complex (APC15 deletion mutant) in complex with the E2 UBE2C/UBCH10 poised for ubiquitin ligation to substrate (APC/C-CDC20-substrate-UBE2C)
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2016-06-15
Authors: VanderLinden, R., Yamaguchi, M., Dube, P., Haselbach, D., Stark, H., Schulman, B.A.
PDB entry 5khs: Crystal structures of the Burkholderia multivorans hopanoid transporter HpnN
Classification: MEMBRANE PROTEIN
Source organism: Burkholderia multivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.758 Å
Deposited: 2016-06-15
Authors: Su, C.-C., Yu, E.W.
PDB entry 5kht: Crystal structure of the N-terminal fragment of tropomyosin isoform Tpm1.1 at 1.5 A resolution
Classification: actin-binding protein
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4964 Å
Deposited: 2016-06-15
Authors: Kostyukova, A.S., Krieger, I., Yoon, Y.-H., Tolkatchev, D., Samatey, F.A.
PDB entry 5khu: Model of human Anaphase-promoting complex/Cyclosome (APC15 deletion mutant), in complex with the Mitotic checkpoint complex (APC/C-CDC20-MCC) based on cryo EM data at 4.8 Angstrom resolution
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.8 Å
Deposited: 2016-06-15
Authors: Yamaguchi, M., VanderLinden, R., Dube, P., Stark, H., Schulman, B.
PDB entry 5khw: Crystal structure of JAK1 in complex with ADP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2016-06-16
Authors: Han, S., Caspers, N.L.
PDB entry 5khx: Crystal structure of JAK1 in complex with PF-4950736
Classification: transferase/transferase INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-06-16
Authors: Han, S., Caspers, N.L.
PDB entry 5khy: Crystal structure of oxime-linked K6 diubiquitin
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.501 Å
Deposited: 2016-06-16
Authors: Stanley, M., Virdee, S.
PDB entry 5khz: PSEUDO T4 LYSOZYME
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2016-06-16
Authors: Scholfield, M.R.
PDB entry 5ki0: NMR structure of human antimicrobial peptide KAMP-19
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2016-06-16
Authors: Wang, G.
PDB entry 5ki1: PSEUDO T4 LYSOZYME MUTANT - Y18F
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2016-06-16
Authors: Scholfield, M.R.
PDB entry 5ki2: PSEUDO T4 LYSOZYME MUTANT - Y18PHE-METHYL
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-06-16
Authors: Ford, M.C., Scholfield, M.R.
PDB entry 5ki3: PSEUDO T4 LYSOZYME MUTANT - Y18PHE-BR
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-06-16
Authors: Butta, H.W., Scholfield, M.R.
PDB entry 5ki4: Structural impact of single ribonucleotides in DNA
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-06-16
Authors: Evich, M., Spring-Connell, A.M., Storici, F.
PDB entry 5ki5: Structural impact of single ribonucleotides in DNA
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-06-16
Authors: Evich, M., Spring-Connell, A.M., Storici, F., Germann, M.W.
PDB entry 5ki6: Human Argonaute-2 bound to a guide RNA with a nucleobase modification at position 1
Classification: HYDROLASE/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.153 Å
Deposited: 2016-06-16
Authors: Schirle, N.T., MacRae, I.J.
PDB entry 5ki7: Structural impact of single ribonucleotides in DNA
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-06-16
Authors: Evich, M., Spring-Connell, A.M., Storici, F., Germann, M.W.
PDB entry 5ki8: PSEUDO T4 LYSOZYME MUTANT - Y88PHE-BR
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2016-06-16
Authors: Scholfield, M.R.
PDB entry 5ki9: Crystal structure of human beta-defensin 4 (HBD4)
Classification: ANTIMICROBIAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-06-16
Authors: Jacek, L., Adam, P., Marzenam, P.
PDB entry 5kia: Crystal structure of L-threonine 3-dehydrogenase from Burkholderia thailandensis
Classification: OXIDOREDUCTASE
Source organism: Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-06-16
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5kib: Structural impact of single ribonucleotides in DNA
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-06-16
Authors: Evich, M., Spring-Connell, A.M., Storici, F., Germann, M.W.
PDB entry 5kic: Long-sought stabilization of berkelium(IV) in solution: An anomaly within the heavy actinide series
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-06-16
Authors: Rupert, P.B., Strong, R.K.
PDB entry 5kid: Tightening the Recognition of Tetravalent Zr and Th Complexes by the Siderophore-Binding Mammalian Protein Siderocalin for Theranostic Applications
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2016-06-16
Authors: Rupert, P.B., Strong, R.K.
PDB entry 5kie: Structural impact of single ribonucleotides in DNA
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-06-16
Authors: Evich, M., Spring-Connell, A.M., Storici, F., Germann, M.W.
PDB entry 5kif: Structural impact of single ribonucleotides in DNA
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-06-16
Authors: Evich, M., Spring-Connell, A.M., Storici, F., Germann, M.W.
PDB entry 5kig: PSEUDO T4 LYSOZYME MUTANT - Y88F
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-06-16
Authors: Scholfield, M.R.
PDB entry 5kih: Structural impact of single ribonucleotides in DNA
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-06-16
Authors: Evich, M., Spring-Connell, A.M., Storici, F., Germann, M.W.
PDB entry 5kii: PSEUDO T4 LYSOZYME MUTANT - Y88PHE-METHYL
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2016-06-16
Authors: Scholfield, M.R.
PDB entry 5kij: Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase and Man9GlcNAc2-PA complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.649 Å
Deposited: 2016-06-16
Authors: Karaveg, K., Xiang, Y., Moremen, K.W.
PDB entry 5kik: CmlA beta-hydroxylase in chemically reduced diferrous state
Classification: METAL BINDING PROTEIN
Source organism: Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2016-06-16
Authors: Knoot, C.J., Lipscomb, J.D.
PDB entry 5kil: CmlA beta-hydroxylase E377D mutant
Classification: OXIDOREDUCTASE
Source organism: Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2016-06-16
Authors: Knoot, C.J., Lipscomb, J.D.
PDB entry 5kim: PSEUDO T4 LYSOZYME MUTANT - Y88PHE-I
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2016-06-16
Authors: Scholfield, M.R.
PDB entry 5kin: Crystal structure of tryptophan synthase alpha beta complex from Streptococcus pneumoniae
Classification: LYASE
Source organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2016-06-16
Authors: Chang, C., Michalska, K., Bigelow, L., Jedrzejczak, R., ANDERSON, W.F., JOACHIMIAK, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5kio: PSEUDO T4 LYSOZYME MUTANT - Y18PHE-I
Classification: HYDROLASE
Source organism: Enterobacteria phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2016-06-16
Authors: Scholfield, M.R.
PDB entry 5kip: Asymmetric unit for the coat proteins of phage Qbeta
Classification: VIRUS
Source organism: Enterobacteria phage Qbeta
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2016-06-16
Authors: Gorzelnik, K.V., Cui, Z., Zhang, J.
PDB entry 5kiq: SrpA with sialyl LewisX
Classification: SUGAR BINDING PROTEIN
Source organism: Streptococcus sanguinis (strain SK36)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.638 Å
Deposited: 2016-06-16
Authors: Iverson, T.M.
PDB entry 5kir: The Structure of Vioxx Bound to Human COX-2
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.697 Å
Deposited: 2016-06-16
Authors: Orlando, B.J., Malkowski, M.G.
PDB entry 5kis: YenB/RHS2 complex
Classification: TOXIN
Source organism: Yersinia entomophaga
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-06-16
Authors: Busby, J.N., Hurst, M.R.H., Lott, J.S.
PDB entry 5kit: Crystal Structure of Nicotinamide Phosphoribosyltransferase (Nampt) in Complex with Inhibitors 37
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-06-17
Authors: Li, D., Wang, W.