LiteFold/PDB huggingface dataset:
PDB entry 9ug9: The cryo-EM structure of 26S proteasome-Midnolin complex MB state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-04-11
Authors: Wang, H.Y., Xu, W.Q.
PDB entry 9uga: SARM1 senses DNA to promote NAD degradation
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2025-04-11
Authors: Wang, L.N., Yang, Q.K.
PDB entry 9ugb: Cryo-EM structure of the Pma1 with ordered N-terminal extension in the activated state
Classification: PROTON TRANSPORT
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2025-04-11
Authors: You, Z.L., Bai, L.
PDB entry 9ugc: Cryo-EM structure of the Pma1 with ordered N-terminal extension in the autoinhibited state
Classification: PROTON TRANSPORT
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2025-04-11
Authors: You, Z.L., Bai, L.
PDB entry 9uge: Crystal structure of the complex of camel peptidoglycan recognition protein, PGRP-S with malic acid and oxalic acid at 2.3 A resolution
Classification: IMMUNE SYSTEM
Source organism: Camelus dromedarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.305 Å
Deposited: 2025-04-11
Authors: Barik, D., Ahmad, N., Maurya, A., Yamini, S., Sharma, P., Yadav, S.P., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 9ugf: CDK2 small molecule F05
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2025-04-11
Authors: Ge, S.
PDB entry 9ugg: PsdAB dimer (peptidisc sample)
Classification: TRANSPORT PROTEIN
Source organism: Bacillus sp. TSA-4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-04-11
Authors: He, Y.T., Fan, W.J., Shao, K., Luo, M.
PDB entry 9ugh: crystal structure of ferritin from pig spleen
Classification: METAL BINDING PROTEIN
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2025-04-12
Authors: Tuo, Z., Meng, C.
PDB entry 9ugi: Room temperature structure of lysozyme by serial synchrotron crystallography
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-12
Authors: Nam, K.H.
PDB entry 9ugj: Structure of SARM1 bound to SIR3-ADPR
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2025-04-12
Authors: Zhang, J., Zheng, S., Wang, X.
PDB entry 9ugk: Crystal Structure of Rv0866 from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-04-12
Authors: Cho, H.J., Kang, B.S.
PDB entry 9ugl: Cryo-EM structure of 5-HT2CR.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2025-04-12
Authors: Parajulee, A., Kim, K.
PDB entry 9ugm: Crystal structure of FAD containing choline oxidase mutant from Arthrobacter chlorophenolicus
Classification: FLAVOPROTEIN
Source organism: Pseudarthrobacter chlorophenolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2025-04-12
Authors: Han, P.C., Ma, B.D., Kong, X.D.
PDB entry 9ugo: Cryo-EM structure of the HBsAg dimer and Complex with Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: hepatitis B virus genotype A; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2025-04-13
Authors: Liu, Y., Liao, M., Liu, Z., Ju, B., Zhang, Z.
PDB entry 9ugp: Crystal structure of MCL-1 in complex with HRK BH3
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2025-04-13
Authors: Wei, H., Wang, J.
PDB entry 9ugq: Cryo-EM structure of ClassIII Salivaricin modification enzyme SalKC in the presence of SalA
Classification: ANTIMICROBIAL PROTEIN
Source organism: Streptococcus salivarius
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2025-04-13
Authors: Li, Y., Luo, M., Shao, K., Li, Y.
PDB entry 9ugr: Crystal structure of Syn-F4-Link, a covalent dimer of Syn-F4 (K4T)
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-04-13
Authors: Nagahara, M., Kurihara, K., Liao, G., Tao, S., Umezawa, K., Hecht, M.H., Arai, R.
PDB entry 9ugs: Butanol Dehydrogenase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Fusobacterium nucleatum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-13
Authors: Bai, X., Meng, D., Xu, Y.B., Nam, K.H.
PDB entry 9ugt: Structure of Butanol Dehydrogenase in Complex with ADP and Co
Classification: BIOSYNTHETIC PROTEIN
Source organism: Fusobacterium nucleatum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2025-04-13
Authors: Bai, X., Meng, D., Nam, K.H., Xu, Y.B.
PDB entry 9ugu: Cryo-EM Structure of Apo-G6PT1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2025-04-13
Authors: Shuai, G., Xia, Y., Qian, W.
PDB entry 9ugx: Cryo-EM Structure of G6PT1-apo monomer in pi buffer
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2025-04-13
Authors: Shuai, G., Xia, Y., Qian, W.
PDB entry 9ugy: Cryo-EM Structure of G6PT1 bound with GlcN6P
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-04-14
Authors: Shuai, G., Xia, Y., Qian, W.
PDB entry 9uh1: BCCP-BC Conformation of apo-hPCC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2025-04-14
Authors: Ni, F.Y., Yan, H.F., Wang, Q.H., Ma, J.P.
PDB entry 9uh2: BCCP-CT Conformation of apo-hPCC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2025-04-14
Authors: Ni, F.Y., Yan, H.F., Wang, Q.H., Ma, J.P.
PDB entry 9uh3: PSI-9 FCPI supercomplex from haptophyte Chrysotila roscoffensis
Classification: PHOTOSYNTHESIS
Source organism: Chrysotila roscoffensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.74 Å
Deposited: 2025-04-14
Authors: La Rocca, R., Tsai, P.-C., Kato, K., Nakajima, Y., Akita, F., Shen, J.-R.
PDB entry 9uh4: PSI-4 FCPI supercomplex from haptophyte Chrysotila roscoffensis
Classification: PHOTOSYNTHESIS
Source organism: Chrysotila roscoffensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.12 Å
Deposited: 2025-04-14
Authors: La Rocca, R., Tsai, P.-C., Kato, K., Nakajima, Y., Akita, F., Shen, J.-R.
PDB entry 9uh5: BCCP-BC Conformation of ADP-bound hPCC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2025-04-14
Authors: Ni, F.Y., Yan, H.F., Wang, Q.H., Ma, J.P.
PDB entry 9uh6: BCCP-CT Conformation of ADP-bound hPCC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-14
Authors: Ni, F.Y., Yan, H.F., Wang, Q.H., Ma, J.P.
PDB entry 9uh7: large lobe of human Ribonuclease MRP
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2025-04-14
Authors: Zhou, B., Lan, P., Wu, J., Lei, M.
PDB entry 9uh8: BCCP-BC Conformation of AMPPNP-bound hPCC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2025-04-14
Authors: Ni, F.Y., Yan, H.F., Wang, Q.H., Ma, J.P.
PDB entry 9uh9: human Ribonuclease MRP state 1
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2025-04-14
Authors: Zhou, B., Lan, P., Wu, J., Lei, M.
PDB entry 9uha: human Ribonuclease MRP state 2
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2025-04-14
Authors: Zhou, B., Lan, P., Wu, J., Lei, M.
PDB entry 9uhb: BCCP-CT Conformation of AMPPNP-bound hPCC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2025-04-14
Authors: Ni, F.Y., Yan, H.F., Wang, Q.H., Ma, J.P.
PDB entry 9uhc: FGFR1 kinase domain with a covalent inhibitor 9p
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2025-04-14
Authors: Chen, X.J., Chen, Y.H.
PDB entry 9uhd: Structure of FAM92A BAR domain
Classification: LIPID BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2025-04-14
Authors: Xu, X., Ren, J., Li, J.
PDB entry 9uhi: FGFR1 kinase domain with a covalent inhibitor 9o
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2025-04-14
Authors: Chen, X.J., Chen, Y.H.
PDB entry 9uhr: BCCP-BC Conformation of ATP-bound hPCC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2025-04-14
Authors: Ni, F.Y., Yan, H.F., Wang, Q.H., Ma, J.P.
PDB entry 9uhs: Complete a6b6 of ATP-bound hPCC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2025-04-14
Authors: Ni, F.Y., Yan, H.F., Wang, Q.H., Ma, J.P.
PDB entry 9uht: Optimised density for SARS-CoV-2 E-RTC in complex with RNA-nsp9 and GMPPNP
Classification: VIRAL PROTEIN/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2025-04-14
Authors: Huang, Y.C., Liu, Y.X., Lou, Z.Y., Rao, Z.H., Yan, L.M.
PDB entry 9uhy: BCCP-CT Conformation of ATP-bound hPCC
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2025-04-15
Authors: Ni, F.Y., Yan, H.F., Wang, Q.H., Ma, J.P.
PDB entry 9ui1: transporter
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2025-04-15
Authors: Jiang, D.H., Yan, R.
PDB entry 9ui2: Crystal structure of Thermus thermophilus HB8 transaldolase
Classification: TRANSFERASE
Source organism: Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-04-15
Authors: Kamitori, S.
PDB entry 9ui4: Rad51 presynaptic complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2025-04-15
Authors: Luo, S.C., Ho, M.C.
PDB entry 9ui5: Rad51 postsynaptic complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2025-04-15
Authors: Luo, S.C., Ho, M.C.
PDB entry 9ui6: transporter
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2025-04-15
Authors: Jiang, D.H., Yan, R.
PDB entry 9ui7: structure of a 4 base pair Rad51 D-loop complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.91 Å
Deposited: 2025-04-15
Authors: Luo, S.C., Ho, M.C.
PDB entry 9ui8: structure of an 8 base pair Rad51 D-loop complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-15
Authors: Luo, S.C., Ho, M.C.
PDB entry 9ui9: structure of a 12 base pair Rad51 D-loop complex
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2025-04-15
Authors: Luo, S.C., Ho, M.C.
PDB entry 9uib: Crystal Structure of Oryza sativa SGT1-TPR domain
Classification: PLANT PROTEIN
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2025-04-15
Authors: Xin, Z.
PDB entry 9uie: Electronic microscopy structure of human schlafen14-E211A dimer in complex with dsRNA
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2025-04-15
Authors: Mengyun, L., Dapeng, S., Wei, H., Yumei, W., Sheng, C.
PDB entry 9uif: transporter complex
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2025-04-15
Authors: Jiang, D.H., Yan, R.
PDB entry 9uih: CryoEM structure of Western equine encephalitis virus California VLP
Classification: VIRAL PROTEIN
Source organism: Western equine encephalitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2025-04-15
Authors: Liang, S.J., Lou, Z.Y.
PDB entry 9uin: Human thioredoxin reductase 1 (SeCys 498 Cys) with Cu(I)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2025-04-15
Authors: wang, J.
PDB entry 9uio: CryoEM structure of Western equine encephalitis virus California VLP in complex with VLDLR-LA1-3
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Western equine encephalitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2025-04-15
Authors: Liang, S.J., Lou, Z.Y.
PDB entry 9uiq: Structure of CTF18-PCNA with ATP
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-16
Authors: Briola, G.R., Tehseen, M., Al-Amodi, A., Nguyen, P.Q., Savva, C.G., Hamdan, S.M., De Biasio, A.
PDB entry 9uit: transporter
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2025-04-16
Authors: Jiang, D.H., Yan, R.
PDB entry 9uiu: Crystal structure of alpha-parvin CH1 dimer
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.355 Å
Deposited: 2025-04-16
Authors: Wei, Z., Zhao, C., Yu, C.
PDB entry 9uj0: Structure of Aegerolysin-L pore
Classification: TOXIN
Source organism: Alternaria alternata
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.81 Å
Deposited: 2025-04-16
Authors: Gao, P., Zhao, C.Q.
PDB entry 9uj1: Crystal Structure of AKR1C3 in Complex with an Osthole-Derived Inhibitor
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-04-16
Authors: Liu, H., Zheng, X., Sun, M.
PDB entry 9uj2: 14-3-3 zeta chimera with the S202R peptide of SARS-CoV-2 N (residues 200-213)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-16
Authors: Boyko, K.M., Matyuta, I.O., Minyaev, M.E., Perfilova, K.V., Sluchanko, N.N.
PDB entry 9uj3: Improved thermostability of a GH10 xylanase based on its X-ray crystal structure
Classification: HYDROLASE
Source organism: Massilia sp. RBM26
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2025-04-16
Authors: Dong, P.P., Dong, P.P.
PDB entry 9uj4: Structure of human KCNQ1-CaM complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2025-04-16
Authors: Hou, P.P., Zhang, J., Cheng, X.Y., Wan, S.Y., Zhong, L., Hu, B.
PDB entry 9uj5: Crystal structure of SME-1 E166A in complex with cefprozil
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-04-17
Authors: Dhankhar, K., Hazra, S.
PDB entry 9uj6: Crystal structure of SME-1 E166A in complex with cefsulodin
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-04-17
Authors: Dhankhar, K., Hazra, S.
PDB entry 9uj7: Crystal Structure of SME-1 E166A in complex with cefoperazone
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-04-17
Authors: Dhankhar, K., Hazra, S.
PDB entry 9uj8: Crystal structure of SME-1 E166A with cefovecin
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-17
Authors: Dhankhar, K., Hazra, S.
PDB entry 9uj9: Crystal structure of SME-1 E166A in complex with cefotaxime
Classification: HORMONE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-04-17
Authors: Dhankhar, K., Hazra, S.
PDB entry 9uja: Crystal structure of SME-1 E166A with cefotetan
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-04-17
Authors: Dhankhar, K., Hazra, S.
PDB entry 9ujb: Crystal Structure of SME-1 E166A in complex with Ceftobiprole
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-17
Authors: Dhankhar, K., Hazra, S.
PDB entry 9ujc: Crystal Structure of SME-1 E166A with cefpirome
Classification: HYDROLASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-04-17
Authors: Dhankhar, K., Hazra, S.
PDB entry 9ujd: Crystal structure of a Transaminase PaTA from Pseudonocardia ammonioxydans in complex with PLP and LLP
Classification: TRANSFERASE
Source organism: Pseudonocardia ammonioxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-04-17
Authors: Zhang, Z.B., Liang, X., Wei, H.L., Liu, W.D., You, S.
PDB entry 9uje: Cryo-EM structure of SARS-CoV2 KP.3.1.1 spike protein
Classification: MEMBRANE PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-17
Authors: He, M.Z.
PDB entry 9ujf: Complex of GTP cyclohydrolase with GTP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces mobaraensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.01 Å
Deposited: 2025-04-17
Authors: Wang, Y.L., Hsu, N.S., Li, T.L.
PDB entry 9ujg: Crystal structure of the BTB domain mouse Keap1
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-04-17
Authors: Iso, T., Suzuki, T., Takagi, K., Mizushima, T., Yamamoto, M.
PDB entry 9uji: Crystal structure of the BTB domain mouse Keap1 in complex with CDDO-Im
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.435 Å
Deposited: 2025-04-17
Authors: Iso, T., Suzuki, T., Takagi, K., Mizushima, T., Yamamoto, M.
PDB entry 9ujj: Crystal structure of the BTB domain mouse Keap1 in complex with CDDO-Me
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.43 Å
Deposited: 2025-04-17
Authors: Iso, T., Suzuki, T., Takagi, K., Mizushima, T., Yamamoto, M.
PDB entry 9ujk: CryoEM structure of the T.thermophilus transcription initiation complex in the presence of ATP
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2025-04-17
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9ujl: CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Ap4A
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2025-04-17
Authors: Duan, W., Serganov, A.
PDB entry 9ujm: Structure of a membrane protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2025-04-17
Authors: Parajulee, A., Kim, K.
PDB entry 9ujn: CryoEM structure of the T.thermophilus transcription initiation complex bound to ATP-C, -1 dC in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-04-17
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9ujo: Solution structure of MeV Vc 221-299
Classification: VIRUS
Source organism: Measles morbillivirus
Experimental method: SOLUTION NMR
Deposited: 2025-04-17
Authors: Kumeta, H., Ose, T.
PDB entry 9ujp: CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Up4A
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2025-04-17
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9ujq: Cryo-EM structure of HQY1027-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-04-17
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9ujr: Crystal structure of WDR5 in complex with peptide Ac-MRT-NH2
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-04-17
Authors: Min, J.-R., Zhang, M., Chen, M.-X.
PDB entry 9ujs: RNA polymerase II elongation complex stalled at SHL(-4) of the H3-H4 octasome
Classification: TRANSCRIPTION/RNA/DNA
Source organism: Homo sapiens; Komagataella phaffii GS115; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2025-04-17
Authors: Ho, C.-H., Nozawa, K., Nishimura, M., Oi, M., Kujirai, T., Ogasawara, M., Ehara, H., Sekine, S., Takizawa, Y., Kurumizaka, H.
PDB entry 9ujt: RNA polymerase II elongation complex stalled at SHL(-0.5) of the H3-H4 octasome (tetrasome)
Classification: TRANSCRIPTION/RNA/DNA
Source organism: Homo sapiens; Komagataella phaffii GS115; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.54 Å
Deposited: 2025-04-17
Authors: Ho, C.-H., Nozawa, K., Nishimura, M., Oi, M., Kujirai, T., Ogasawara, M., Ehara, H., Sekine, S., Takizawa, Y., Kurumizaka, H.
PDB entry 9uju: The structure of Egalitarian in complex with the K10 mRNA localization signal reveals a modular binding surface required for function
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2025-04-17
Authors: Hong, Z., Muehle, J., Bono, F.
PDB entry 9ujy: The structure of Egalitarian in complex with the K10 mRNA localization signal reveals a modular binding surface required for function
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2025-04-17
Authors: Hong, Z., Muehle, J., Bono, F.
PDB entry 9ujz: Crystal structure of WDR5 in complex with peptide Ac-MRTEPRP-NH2
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2025-04-17
Authors: Min, J.-R., Zhang, M., Chen, M.-X.
PDB entry 9uk1: Crystal structure of WDR5 in complex with EMBOW
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2025-04-17
Authors: Min, J.-R., Zhang, M., Chen, M.-X.
PDB entry 9uk2: Human OXGR1-miniGq complex (conformation 1)
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-04-17
Authors: Wang, C., Liu, H.
PDB entry 9uk3: Crystal structure of WDR5 in complex with peptide Ac-MRTEPRPPAP-NH2
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2025-04-17
Authors: Min, J.-R., Zhang, M., Chen, M.-X.
PDB entry 9uk4: Crystal structure of WDR5 in complex with peptide Ac-ARA-NH2
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2025-04-17
Authors: Min, J.-R., Zhang, M., Chen, M.-X.
PDB entry 9uk5: crystal structure of the complex of interleukin-31 and its antibody
Classification: CYTOKINE/IMMUNE SYSTEM
Source organism: Canis lupus familiaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-17
Authors: Guo, T., Gao, F., Xiao, H.
PDB entry 9uk6: Dimeric parallel G-quadruplex formed by d(G4C2)4
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2025-04-17
Authors: Geng, Y., Cai, Q.
PDB entry 9uk7: Crystal structure of WDR5 in complex with peptide Ac-MRTEP-NH2
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-04-17
Authors: Min, J.-R., Zhang, M., Chen, M.-X.
PDB entry 9uk8: Monomeric antiparallel G-quadruplex formed by d(G4C2)4
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-04-17
Authors: Geng, Y., Cai, Q.
PDB entry 9ukm: Cryo-EM structure of bacteriophage P1 head
Classification: VIRAL PROTEIN
Source organism: Escherichia phage P1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-04-18
Authors: Yang, F., Liu, H.R.
PDB entry 9ukn: CryoEM structure of the T.thermophilus transcription initiation complex
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2025-04-18
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9uko: CryoEM structure of the T.thermophilus transcription initiation complex bound to Ap4A-C, -1 dA in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2025-04-18
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9ukp: CryoEM structure of the T.thermophilus transcription initiation complex bound to Ap4A-C, -1 dC in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2025-04-18
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9ukq: Crystal structure of glycogen phosphorylase from Escherichia coli
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2025-04-18
Authors: Takai, M., Shobu, K., Fukuda, Y., Inoue, T.
PDB entry 9ukr: Crystal structure of glycogen phosphorylase from E. coli in complex with AMP
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2025-04-18
Authors: Takai, M., Shobu, K., Fukuda, Y., Inoue, T.
PDB entry 9uks: CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Gp4A, -1 dA in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.33 Å
Deposited: 2025-04-18
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9ukt: CryoEM structure of the T.thermophilus transcription initiation complex bound to Gp4A-C-U and CTP, -1 dC in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2025-04-18
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9uku: CryoEM structure of the T.thermophilus transcription initiation complex bound to Gp4A-C, -1 dC in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2025-04-18
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9ukv: JM Complex - E. coli MurJ, Levivirus M lysis protein LysM (SglM)
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage M; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2025-04-18
Authors: Kohga, H., Lertpreedakorn, N., Tsukazaki, T.
PDB entry 9ukw: A designed protein-A339
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2025-04-18
Authors: Yurui, Z., Yajun, J., Peng, Z.
PDB entry 9uky: Crystal structure of dmCIAO1-CIAO2B-hCDKAL1 pentapeptide complex
Classification: METAL BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-18
Authors: Ren, W.J., Yang, W., Wang, H.
PDB entry 9ukz: dihydrolipoyl acetyl transferase (E2) inner core of the pyruvate dehydrogenase complex
Classification: STRUCTURAL PROTEIN
Source organism: Geobacillus stearothermophilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2025-04-18
Authors: Kim, H., Jeong, M.S., An, M.Y., Jung, H.S.
PDB entry 9ul0: Wild-type Bacillus megaterium Penicillin G Acylase with Covalently Bound Phenylacetic Acid
Classification: STRUCTURAL PROTEIN
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2025-04-18
Authors: Kaewsasan, C., Rojviriya, C., Yuvaniyama, J.
PDB entry 9ul1: Crystal structure of Tibetan wild boar SLA-1*Z0301 for 2.32 angstrom
Classification: ANTIVIRAL PROTEIN
Source organism: Sus scrofa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.323 Å
Deposited: 2025-04-18
Authors: Fan, S., Wang, Y.
PDB entry 9ul6: Crystal structure of Lamin A/C Ig-like domain mutant - R435C
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-19
Authors: Lee, J., Ha, N.C.
PDB entry 9ul7: Improved thermostability of a GH3 glycosidase based on its X-ray crystal structure
Classification: HYDROLASE
Source organism: Clavibacter michiganensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-04-19
Authors: Dong, P.P., Dong, P.P.
PDB entry 9ul8: Cryogenic temperature crystal structure of Nmar_1308 protein at 2.46 angstrom resolution
Classification: STRUCTURAL PROTEIN
Source organism: Nitrosopumilus maritimus SCM1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2025-04-19
Authors: Destan, E., DeMirci, H.
PDB entry 9ul9: Cryogenic temperature crystal structure of Nmar_1308 protein at 2.71 angstrom resolution
Classification: STRUCTURAL PROTEIN
Source organism: Nitrosopumilus maritimus SCM1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2025-04-19
Authors: Destan, E., DeMirci, H.
PDB entry 9ula: Cryogenic temperature crystal structure of Nmar_1308 protein at 2.96 angstrom resolution
Classification: STRUCTURAL PROTEIN
Source organism: Nitrosopumilus maritimus SCM1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.96 Å
Deposited: 2025-04-19
Authors: Destan, E., DeMirci, H.
PDB entry 9ulb: Cryogenic temperature crystal structure of Nmar_1308 protein at 3.29 angstrom resolution
Classification: STRUCTURAL PROTEIN
Source organism: Nitrosopumilus maritimus SCM1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2025-04-19
Authors: Destan, E., DeMirci, H.
PDB entry 9ulc: Ambient temperature crystal structure of Nmar_1308 protein at 3.33 angstrom resolution
Classification: STRUCTURAL PROTEIN
Source organism: Nitrosopumilus maritimus SCM1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.33 Å
Deposited: 2025-04-19
Authors: Destan, E., DeMirci, H.
PDB entry 9uld: Ambient temperature crystal structure of Nmar_1308 protein at 3.40 angstrom resolution
Classification: STRUCTURAL PROTEIN
Source organism: Nitrosopumilus maritimus SCM1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2025-04-19
Authors: Destan, E., DeMirci, H.
PDB entry 9ule: Crystal structure of CYP105A1 R84A complexed with diclofenac (DIF) at room temperature
Classification: OXIDOREDUCTASE
Source organism: Streptomyces griseolus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2025-04-19
Authors: Mikami, B., Takita, T., Yoneda, S., Yasuda, K., Sakaki, T., Yasukawa, K.
PDB entry 9ulf: Drosophila melanogaster Nicotinamidase in Complex with Inhibitor CN6
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.949 Å
Deposited: 2025-04-19
Authors: Li, G.-B., Chen, Y.-T.
PDB entry 9ulg: Drosophila melanogaster Nicotinamidase in Complex with Inhibitor CN3
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-04-19
Authors: Li, G.-B., Chen, Y.-T.
PDB entry 9ulh: Drosophila melanogaster Nicotinamidase in Complex with Inhibitor AAM
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.561 Å
Deposited: 2025-04-19
Authors: Li, G.-B., Chen, Y.-T.
PDB entry 9uli: Drosophila melanogaster Nicotinamidase in Complex with Inhibitor CN5
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.659 Å
Deposited: 2025-04-19
Authors: Li, G.-B., Chen, Y.-T.
PDB entry 9ulj: Phenylquinoline derivatives as soluble epoxide hydrolase inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-04-20
Authors: Wang, H., Feng, Y., Ge, Z.H.
PDB entry 9ull: Mogamulizumab in complex with CCR4 N-terminus peptide (S14-S24)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION, SOLUTION SCATTERING
Resolution: 1.63 Å
Deposited: 2025-04-20
Authors: Heo, Y.-S.
PDB entry 9ulm: Mogamulizumab in complex with CCR4 N-terminus peptide (N2-C29)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2025-04-20
Authors: Heo, Y.-S.
PDB entry 9uln: Mogamulizumab Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2025-04-20
Authors: Heo, Y.-S.
PDB entry 9ulo: Cryo-EM structure of Human Mre11-Nbs1 complex
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.91 Å
Deposited: 2025-04-20
Authors: Sun, Y., Ying, S.
PDB entry 9ulp: Crystal structure of FtsB from Streptococcus pyogenes in complex with Nb1 nanobody
Classification: IMMUNE SYSTEM
Source organism: Streptococcus pyogenes; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2025-04-20
Authors: Fernandez-Perez, J., Caaveiro, J.M.M., Tsumoto, K.
PDB entry 9ulq: Recombinant Human Serum Albumin protein 3
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2025-04-21
Authors: Xiang, W., Yue, Z.L., Su, J.Y.
PDB entry 9ulr: Recombinant Human Serum Albumin protein 1
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2025-04-21
Authors: Xiang, W., Yue, Z.L., Su, J.Y.
PDB entry 9uls: CryoEM structure of the T.thermophilus transcription initiation complex bound to Up4A-C and Up4A, -1 dA in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-04-21
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9ult: CryoEM structure of the T.thermophilus transcription initiation complex bound to Up4A-C and UTP, -1 dA in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2025-04-21
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9ulu: Recombinant Human Serum Albumin protein 2
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2025-04-21
Authors: Xiang, W., Yue, Z.L., Su, J.Y.
PDB entry 9ulw: Crystal Structure of Cytochrome P450 GpeC
Classification: BIOSYNTHETIC PROTEIN
Source organism: Gallaecimonas pentaromativorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2025-04-21
Authors: Zhou, J.H., Pang, C.P.
PDB entry 9ulx: crystal structure of apo AbGHMP
Classification: TRANSFERASE
Source organism: Acidobacteriota
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2025-04-21
Authors: He, C., Li, F.
PDB entry 9uly: crystal structure of AbGHMP in complex with L-Ara and AMPPNP
Classification: TRANSFERASE
Source organism: Acidobacteriota
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-04-21
Authors: He, C., Li, F.
PDB entry 9ulz: Cryo-EM structure of hIAPP fibrils extracted from a donor with T2D and pancreatic cancer
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-04-21
Authors: Cao, Q., Liu, W., Han, J.
PDB entry 9um2: Pterocarpan Reductase GuPTR1 from Glycyrrhiza uralensis
Classification: OXIDOREDUCTASE
Source organism: Glycyrrhiza uralensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-21
Authors: Li, H.Y., Zou, J.L., Zhang, M., Ye, M.
PDB entry 9um3: CaPETaseM9 SEC loop of 6CLb variant
Classification: HYDROLASE
Source organism: Cryptosporangium aurantiacum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2025-04-21
Authors: Kim, K., Ki, D., Park, J.
PDB entry 9um4: CaPETaseM9 SEC loop of 9CL variant
Classification: HYDROLASE
Source organism: Cryptosporangium aurantiacum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2025-04-21
Authors: Kim, K., Ki, D., Park, J.
PDB entry 9um5: CaPETaseM9 SEC loop of 10CL variant
Classification: HYDROLASE
Source organism: Cryptosporangium aurantiacum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2025-04-21
Authors: Kim, K., Ki, D., Park, J.
PDB entry 9um6: CaPETaseM9 SEC loop of 10CL+E289P variant
Classification: HYDROLASE
Source organism: Cryptosporangium aurantiacum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2025-04-21
Authors: Kim, K., Ki, D., Park, J.
PDB entry 9um7: CaPETaseM9 SEC loop of 12CL variant
Classification: HYDROLASE
Source organism: Cryptosporangium aurantiacum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2025-04-21
Authors: Kim, K., Ki, D., Park, J.
PDB entry 9um8: CaPETaseM9 + P289E variant
Classification: HYDROLASE
Source organism: Cryptosporangium aurantiacum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2025-04-21
Authors: Kim, K., Ki, D., Park, J.
PDB entry 9uma: CryoEM structure of T.thermophilus transcription initiation complex bound to Gp4A-C, -1 dA in the template DNA strand
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2025-04-21
Authors: Duan, W., Kaushik, A., Serganov, A.
PDB entry 9umb: Structure of Modified adeno-associated viral vector, AAV5-BCD
Classification: VIRUS
Source organism: adeno-associated virus 5
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2025-04-21
Authors: Zhang, H., Burtseva, A.D., Strelkova, A.N., Perepelkina, M.P., Iurlova, E.V., Gershovich, P.M., Prokof'ev, A.V., Kolesnichenko, A.S., Gulnova, A.R., Nurtdinov, R.F., Vasilev, A.A., Yakovlev, P.A., Popov, V.O., Boyko, K.M.
PDB entry 9umc: Human poly ADP-ribose polymerase(PARP-1 )zinc finger 1 bound to 13bp DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-04-21
Authors: Yan, M., Zhang, H.
PDB entry 9umd: autoinhibited kpNLRL
Classification: IMMUNE SYSTEM
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 4.14 Å
Deposited: 2025-04-21
Authors: Wang, L., Wang, H., Li, J.
PDB entry 9umf: Human poly ADP-ribose polymerase(PARP-1 )zinc finger 1 bound to 17bp DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2025-04-21
Authors: Yan, M., Zhang, H.
PDB entry 9umg: Cryo-EM structure of VTC complex(Vtc5/Vtc4/Vtc3/Vtc1)
Classification: TRANSPORT PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2025-04-21
Authors: Zhang, J., Du, Z., Liu, Z.
PDB entry 9umh: V-type (V2-type) amyloid fibril (40) of Tottori (D7N) mutant
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-22
Authors: Burton-Smith, R.N., Murata, K.
PDB entry 9umj: Structure of EP54 bound mouse C3aR in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2025-04-22
Authors: Banerjee, R., Yadav, M.K., Yadav, R., Ganguly, M., Mishra, S., Dalal, A., Gati, C., Shukla, A.K.
PDB entry 9umk: crystal structure of apo MbUSP
Classification: TRANSFERASE
Source organism: Myxococcales
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2025-04-22
Authors: He, C., Li, F.
PDB entry 9uml: crystal structure of MbUSP in complex with UDP-Gal
Classification: TRANSFERASE
Source organism: Myxococcales
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-04-22
Authors: He, C., Li, F.
PDB entry 9umm: Giraffe KIF5A motor domain crystallized in the presence of 10 mM ADP
Classification: MOTOR PROTEIN
Source organism: Giraffa camelopardalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-04-22
Authors: Imasaki, T., Sakai, N., Nitta, R.
PDB entry 9umn: Giraffe KIF5A motor domain crystallized in the presence of 1 mM AMPPNP
Classification: MOTOR PROTEIN
Source organism: Giraffa camelopardalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2025-04-22
Authors: Imasaki, T., Sakai, N., Nitta, R.
PDB entry 9umr: Structure of C5a-pep bound human C5aR1 in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2025-04-22
Authors: Banerjee, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Shukla, A.K.
PDB entry 9ums: Cryo-EM structure of bacteriophage P1 connector
Classification: VIRAL PROTEIN
Source organism: Escherichia phage P1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-04-22
Authors: Yang, F., Liu, H.R.
PDB entry 9umt: TRiC_HDAC1_close_state
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2025-04-23
Authors: Li, Z.L., Cong, Y.C.
PDB entry 9umu: Giraffe KIF5A motor domain in nucleotide free state bound to microtubule
Classification: MOTOR PROTEIN
Source organism: Giraffa camelopardalis; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2025-04-23
Authors: Imasaki, T., Yamagishi, Y., Shigematsu, H., Nitta, R.
PDB entry 9umx: Structure of EP54 bound human C5aR1 in complex with Go
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-23
Authors: Banerjee, R., Yadav, M.K., Ganguly, M., Mishra, S., Dalal, A., Shukla, A.K.
PDB entry 9umz: Cryo-EM structure of the SFTSV NP-RNA complex
Classification: NUCLEAR PROTEIN/RNA
Source organism: Escherichia coli; SFTS virus HB29
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Deposited: 2025-04-23
Authors: Wang, Y., Wu, H., Deng, Z.
PDB entry 9un2: native NMDAR receptor-GluN1/N2B in the inactive state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2025-04-23
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9un3: native NMDA receptor-GluN1/N2B in the open state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2025-04-23
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9un4: Crystal structure of juvenile hormone acid methyltransferase castaneum JHAMT3 from Tribolium castaneum
Classification: HORMONE
Source organism: Tribolium castaneum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-23
Authors: Guo, P.C., Yang, Y.Y.
PDB entry 9unj: native NMDA receptor-GluN1/N2A-S1 in closed state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2025-04-23
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9unk: native NMDA receptor-GluN1/N2B in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2025-04-23
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9unl: Cryo-EM structure of the human prohibitin complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-04-23
Authors: Hong, S.X., Guan, Z.Y., Wang, Q., Yin, P.
PDB entry 9unm: native NMDA receptor-GluN1/N2A-S2 in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.37 Å
Deposited: 2025-04-23
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9unn: native NMDA receptor-GluN1/N2A-S3 in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2025-04-24
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9uno: native NMDA receptor-GluN1/N2A in the inactive state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2025-04-24
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9unp: native NMDA receptor-GluN1/N2A/N2B-S2 in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2025-04-24
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9unq: native NMDA receptor-GluN1/N2A/2B in inactive state
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-24
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9unr: native NMDA receptor-GluN1/N2A/N2B-S1 in the closed state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2025-04-24
Authors: Yu, J., Xu, R.S., Ge, J.P.
PDB entry 9uns: Apg mutant enzyme D448N of acarbose hydrolase from human gut flora K. grimontii TD1,complex with acarbose
Classification: HYDROLASE
Source organism: Klebsiella grimontii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2025-04-24
Authors: Zhou, J.H., Huang, J.Y.