LiteFold/PDB huggingface dataset:
PDB entry 2yy2: Crystal structure of the human Phosphodiesterase 9A catalytic domain complexed with IBMX
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2007-04-27
Authors: Handa, N., Shirouzu, M., Terada, T., Omori, K., Kotera, J., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yy3: Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii
Classification: TRANSLATION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-04-27
Authors: Ishii, T., Bessho, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yy5: Crystal Structure of tryptophanyl-tRNA synthetase from Mycoplasma pneumoniae
Classification: LIGASE
Source organism: Mycoplasma pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2007-04-27
Authors: Ishii, T., Bessho, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yy6: Crystal Structure of the phosphoglycolate phosphatase from Aquifex aeolicus VF5
Classification: HYDROLASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-04-27
Authors: Tanaka, T., Kumarevel, T.S., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yy7: Crystal structure of thermolabile L-threonine dehydrogenase from Flavobacterium frigidimaris KUC-1
Classification: OXIDOREDUCTASE
Source organism: Flavobacterium frigidimaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.061 Å
Deposited: 2007-04-27
Authors: Yoneda, K., Sakuraba, H., Oikawa, T., Muraoka, I., Ohshima, T.
PDB entry 2yy8: Crystal structure of archaeal tRNA-methylase for position 56 (aTrm56) from Pyrococcus horikoshii, complexed with S-adenosyl-L-methionine
Classification: TRANSFERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2007-04-27
Authors: Kuratani, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yy9: Crystal structure of BTB domain from mouse HKR3
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2007-04-27
Authors: Kishishita, S., Nishino, A., Murayama, K., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yya: Crystal structure of GAR synthetase from Aquifex aeolicus
Classification: LIGASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2007-04-27
Authors: Baba, S., Kanagawa, M., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yyb: Crystal structure of TTHA1606 from Thermus thermophilus HB8
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2007-04-28
Authors: Tomoike, F., Nakagwa, N., Ebihara, A., Yokoyama, S., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yye: Crystal structure of selenophosphate synthetase from Aquifex aeolicus complexed with AMPCPP
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-04-29
Authors: Itoh, Y., Sekine, S., Matsumoto, E., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yyf: Purification and structural characterization of a D-amino acid containing conopeptide, marmophine, from Conus marmoreus
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2007-04-29
Authors: Huang, F., Du, W., Han, Y., Wang, C.
PDB entry 2yyg: Crystal structure of the oxygenase component (HpaB) of 4-hydroxyphenylacetate 3-monooxygenase
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-04-30
Authors: Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
PDB entry 2yyh: Crystal structure of Nudix family protein from Aquifex aeolicus
Classification: HYDROLASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-04-30
Authors: Nakagawa, N., Kishishita, S., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yyi: Crystal structure of the oxygenase component (HpaB) of 4-hydroxyphenylacetate 3-monooxygenase complexed with FAD
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2007-04-30
Authors: Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
PDB entry 2yyj: Crystal structure of the oxygenase component (HpaB) of 4-hydroxyphenylacetate 3-monooxygenase complexed with FAD and 4-hydroxyphenylacetate
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2007-04-30
Authors: Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
PDB entry 2yyk: Crystal structure of the mutant of HpaB (T198I, A276G, and R466H)
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-04-30
Authors: Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
PDB entry 2yyl: Crystal structure of the mutant of HpaB (T198I, A276G, and R466H) complexed with FAD
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2007-04-30
Authors: Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
PDB entry 2yym: Crystal structure of the mutant of HpaB (T198I, A276G, and R466H) complexed with FAD and 4-hydroxyphenylacetate
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-04-30
Authors: Kim, S.-H., Hisano, T., Takeda, K., Iwasaki, W., Ebihara, A., Miki, K.
PDB entry 2yyn: Crystal structure of human bromodomain protein
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-04-30
Authors: Kishishita, S., Uchikubo-Kamo, T., Murayama, K., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yyo: Crystal structure of human SPRY domain
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-04-30
Authors: Kishishita, S., Uchikubo-Kamo, T., Murayama, K., Terada, T., Chen, L., Fu, Z.Q., Chrzas, J., Shirouzu, M., Wang, B.C., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yyr: Structural analysis of PHD domain of Pygopus complexed with trimethylated histone H3 peptide
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-05-01
Authors: Nakamura, Y., Padmanabhan, B., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yys: Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-05-01
Authors: Okai, M., Miyauchi, Y., Ebihara, A., Lee, W.C., Nagata, K., Tanokura, M.
PDB entry 2yyt: Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
Classification: LYASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-05-02
Authors: Kanagawa, M., Baba, S., Nakamura, Y., Bessho, Y., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yyu: Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
Classification: LYASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-05-02
Authors: Kanagawa, M., Baba, S., Nakamura, Y., Bessho, Y., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yyv: Crystal structure of uncharacterized conserved protein from Thermotoga maritima
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2007-05-02
Authors: Nakagawa, N., Nakamura, Y., Bessho, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yyw: The F20M mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Classification: ELECTRON TRANSPORT
Source organism: Desulfovibrio vulgaris str. 'Miyazaki F'
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2007-05-02
Authors: Higuchi, Y., Komori, H.
PDB entry 2yyx: The Y65A mutant of tetraheme cytochrome c3 from Desulfovibrio Vulgaris Miyazaki F
Classification: ELECTRON TRANSPORT
Source organism: Desulfovibrio vulgaris str. 'Miyazaki F'
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2007-05-02
Authors: Higuchi, Y., Komori, H.
PDB entry 2yyy: Crystal structure of Glyceraldehyde-3-phosphate dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-05-02
Authors: Malay, A.D., Bessho, Y., Padmanabhan, B., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yyz: Crystal structure of Sugar ABC transporter, ATP-binding protein
Classification: TRANSPORT PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2007-05-02
Authors: Ethayathullah, A.S., Bessho, Y., Padmanabhan, B., Singh, T.P., Kaur, P., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yz0: Solution Structure of RWD/GI domain of Saccharomyces cerevisiae GCN2
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR
Deposited: 2007-05-02
Authors: Ogura, K., Torikai, S., Kumeta, H., Inagaki, F.
PDB entry 2yz1: Crystal structure of the ligand-binding domain of murine SHPS-1/SIRP alpha
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2007-05-02
Authors: Nakaishi, A.
PDB entry 2yz2: Crystal structure of the ABC transporter in the cobalt transport system
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-05-02
Authors: Ethayathullah, A.S., Bessho, Y., Padmanabhan, B., Singh, T.P., Kaur, P., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yz3: Crystallographic Investigation of Inhibition Mode of the VIM-2 Metallo-beta-lactamase from Pseudomonas aeruginosa with Mercaptocarboxylate Inhibitor
Classification: HYDROLASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-05-02
Authors: Yamaguchi, Y., Yamagata, Y., Arakawa, Y., Kurosaki, H.
PDB entry 2yz4: The neutron structure of concanavalin A at 2.2 Angstroms
Classification: SUGAR BINDING PROTEIN
Source organism: Canavalia ensiformis
Experimental method: NEUTRON DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-05-02
Authors: Ahmed, H.U., Blakeley, M.P., Cianci, M., Hubbard, J.A., Helliwell, J.R.
PDB entry 2yz5: Histidinol Phosphate Phosphatase complexed with Phosphate
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-05-03
Authors: Omi, R.
PDB entry 2yz7: X-ray analyses of 3-hydroxybutyrate dehydrogenase from Alcaligenes faecalis
Classification: OXIDOREDUCTASE
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2007-05-04
Authors: Hoque, M.M., Juan, E.C.M., Shimizu, S., Hossain, M.T., Takenaka, A.
PDB entry 2yz8: Crystal structure of the 32th Ig-like domain of human obscurin (KIAA1556)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-05-04
Authors: Saijo, S., Ohsawa, N., Nishino, A., Kishishita, S., Chen, L., Fu, Z.Q., Chrzas, J., Wang, B.C., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yza: Crystal structure of kinase domain of Human 5'-AMP-activated protein kinase alpha-2 subunit mutant (T172D)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2007-05-04
Authors: Saijo, S., Takagi, T., Yoshikawa, S., Kishishita, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzb: Crystal structure of uricase from Arthrobacter globiformis in complex with uric acid (substrate)
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-05-05
Authors: Juan, E.C.M., Hossain, M.T., Hoque, M.M., Suzuki, K., Sekiguchi, T., Takenaka, A.
PDB entry 2yzc: Crystal structure of uricase from Arthrobacter globiformis in complex with allantoate
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2007-05-05
Authors: Juan, E.C.M., Hossain, M.T., Hoque, M.M., Suzuki, K., Sekiguchi, T., Takenaka, A.
PDB entry 2yzd: Crystal structure of uricase from Arthrobacter globiformis in complex with 8-azaxanthin (inhibitor)
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2007-05-05
Authors: Juan, E.C.M., Hossain, M.T., Hoque, M.M., Suzuki, K., Sekiguchi, T., Takenaka, A.
PDB entry 2yze: Crystal structure of uricase from Arthrobacter globiformis
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2007-05-05
Authors: Juan, E.C.M., Hossain, M.T., Hoque, M.M., Suzuki, K., Sekiguchi, T., Takenaka, A.
PDB entry 2yzg: Crystal structure of D-ALA:D-ALA Ligase from Thermus thermophilus HB8
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-05-05
Authors: Kitamura, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzh: Crystal structure of peroxiredoxin-like protein from Aquifex aeolicus
Classification: OXIDOREDUCTASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-05-05
Authors: Ebihara, A., Manzoku, M., Fujimoto, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzi: Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2007-05-06
Authors: Kanagawa, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzj: Crystal structure of dCTP deaminase from Sulfolobus tokodaii
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2007-05-06
Authors: Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzk: Crystal structure of orotate phosphoribosyltransferase from Aeropyrum pernix
Classification: TRANSFERASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-05-06
Authors: Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzl: Crystal structure of phosphoribosylaminoimidazole-succinocarboxamide synthase with ADP from Methanocaldococcus jannaschii
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-05-06
Authors: Kanagawa, M., Baba, S., Fukui, K., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzm: Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2007-05-06
Authors: Kitamura, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzn: Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8.
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2007-05-06
Authors: Kitamuta, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzo: Crystal structure of uncharacterized conserved protein from Thermotoga maritima
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-05-06
Authors: Nakagawa, N., Nakamura, Y., Bessho, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzq: Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2007-05-06
Authors: Kanagawa, M., Minami, Y., Watanabe, N., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzr: Crystal structure of pyridoxine biosynthesis protein from Methanocaldococcus jannaschii
Classification: LYASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-05-06
Authors: Manzoku, M., Ebihara, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzs: Crystal structure of uncharacterized conserved protein from Aquifex aeolicus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-05-06
Authors: Ebihara, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzt: Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-05-06
Authors: Ebihara, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzu: Crystal structure of oxidized thioredoxin from Thermus thermophilus HB8
Classification: ELECTRON TRANSPORT
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-05-06
Authors: Ebihara, A., Yanai, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzv: ADP-ribosylglycohydrolase-related protein complex
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-05-06
Authors: Ebihara, A., Manzoku, M., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzw: ADP-ribosylglycohydrolase-related protein complex
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-05-06
Authors: Ebihara, A., Manzoku, M., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2yzy: Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2007-05-06
Authors: Ebihara, A., Watanabe, N., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z00: Crystal structure of dihydroorotase from Thermus thermophilus
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2007-05-06
Authors: Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z01: Crystal structure of phosphoribosylaminoimidazole synthetase from Geobacillus kaustophilus
Classification: LIGASE
Source organism: Geobacillus kaustophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-05-06
Authors: Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z02: Crystal structure of phosphoribosylaminoimidazolesuccinocarboxamide synthase wit ATP from Methanocaldococcus jannaschii
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2007-05-06
Authors: Kanagawa, M., Baba, S., Kuramitsu, S., Yokoyama, S., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z04: Crystal structure of phosphoribosylaminoimidazole carboxylase ATPase subunit from Aquifex aeolicus
Classification: LYASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2007-05-06
Authors: Okada, K., Tamura, S., Baba, S., Kanagawa, M., Kawai, G., Sampei, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z06: Crystal structure of uncharacterized conserved protein from Thermus thermophilus
Classification: METAL BINDING PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-05-06
Authors: Kanagawa, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z07: Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-05-07
Authors: Iino, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z08: Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2007-05-07
Authors: Iino, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z09: Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2007-05-07
Authors: Iino, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0a: Crystal structure of RNA-binding domain of NS1 from influenza A virus A/crow/Kyoto/T1/2004(H5N1)
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-05-07
Authors: Saijo, S., Kishishita, S., Kamo-Uchikubo, T., Terada, T., Shirouzu, M., Ito, H., Ito, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0b: Crystal structure of CBM20 domain of human putative glycerophosphodiester phosphodiesterase 5 (KIAA1434)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-05-07
Authors: Saijo, S., Nishino, A., Kishishita, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0d: The crystal structure of human Atg4B- LC3(1-120) complex
Classification: HYDROLASE/STRUCTURAL PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-05-07
Authors: Satoo, K., Noda, N.N., Inagaki, F.
PDB entry 2z0e: The crystal structure of human Atg4B- LC3(1-124) complex
Classification: HYDROLASE/STRUCTURAL PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-05-07
Authors: Satoo, K., Noda, N.N., Inagaki, F.
PDB entry 2z0f: Crystal structure of putative phosphoglucomutase from Thermus thermophilus HB8
Classification: ISOMERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2007-05-07
Authors: Kanagawa, M., Handa, N., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0g: The crystal structure of PII protein
Classification: SIGNALING PROTEIN
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-05-07
Authors: Sakai, H., Shinkai, A., Kitamura, Y., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0i: Crystal Structure of 5-aminolevulinic acid dehydratase (ALAD) from Mus musculus
Classification: LYASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2007-05-07
Authors: Wang, H., Xie, Y., Kawazoe, M., Kishishita, S., Murayama, K., Takemoto, C., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0j: Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2007-05-07
Authors: Nakagawa, N., Kukimoto-Niino, M., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0k: Crystal structure of ProX-AlaSA complex from T. thermophilus
Classification: TRANSLATION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0l: Crystal structure of EBV-DNA polymerase accessory protein BMRF1
Classification: REPLICATION
Source organism: Human herpesvirus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0m: Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii
Classification: RNA BINDING PROTEIN
Source organism: Sulfolobus tokodaii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-05-07
Authors: Nakagawa, N., Kusano, S., Shirouzu, M., Chen, L., Fu, Z.-Q., Chrzas, J., Wang, B.-C., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0n: Crystal structure of APPL1-BAR domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Sakamoto, A., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0o: Crystal structure of APPL1-BAR-PH domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0p: Crystal structure of PH domain of Bruton's tyrosine kinase
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Mishima, C., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0q: Crystal structure of DH-PH domain of RhoGEF3(Xpln)
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0r: Crystal structure of hypothetical protein TTHA0547
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0s: Crystal structure of putative exosome complex RNA-binding protein
Classification: RNA BINDING PROTEIN
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Takemoto, C., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0t: Crystal structure of hypothetical protein PH0355
Classification: RNA BINDING PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-05-07
Authors: Murayama, K., Takemoto, C., Kato-Murayama, M., Kawazoe, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0u: Crystal structure of C2 domain of KIBRA protein
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0v: Crystal structure of BAR domain of Endophilin-III
Classification: ENDOCYTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0w: Crystal structure of the 2nd CAP-Gly domain in human Restin-like protein 2 reveals a swapped-dimer
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-05-07
Authors: Saito, K., Yoshikawa, S., Nishino, A., Murayama, K., Terada, T., Shirouzu, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0x: Crystal structure of ProX-CysSA complex from T. thermophilus
Classification: TRANSLATION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0y: Crystal structure of TTHA0657-SAM complex
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2007-05-07
Authors: Murayama, K., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z0z: Crystal structure of putative acetyltransferase
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z10: Crystal structure of putative acetyltransferase
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z11: Crystal structure of putative acetyltransferase
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2007-05-07
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z12: Structure of the transformed monoclinic lysozyme by controlled dehydration
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2007-05-07
Authors: Harata, K., Akiba, T.
PDB entry 2z13: Crystal structure of the N-terminal DUF1126 in human EF-hand domain
Classification: Structural genomics, unknown function
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2007-05-07
Authors: Saito, K., Kishishita, S., Nishino, A., Murayama, K., Terada, T., Shirouzu, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z14: Crystal structure of the N-terminal DUF1126 in human ef-hand domain containing 2 protein
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2007-05-08
Authors: Saito, K., Olsen, S., Kishishita, S., Nishino, A., Murayama, K., Terada, T., Shirouzu, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z15: Crystal structure of human Tob1 protein
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-05-08
Authors: Saito, K., Kishishita, S., Nishino, A., Murayama, K., Terada, T., Shirouzu, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z16: Crystal structure of Matrix protein 1 from influenza A virus A/crow/Kyoto/T1/2004(H5N1)
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2007-05-08
Authors: Saijo, S., Kishishita, S., Uchikubo-Kamo, T., Terada, T., Shirouzu, M., Ito, H., Ito, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z17: Crystal structure of PDZ domain from human Pleckstrin homology, Sec7
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2007-05-08
Authors: Kishishita, S., Nishino, A., Murayama, K., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z18: Phase transition of monoclinic lysozyme crystal soaked in a 10% NaCl solution
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2007-05-08
Authors: Harata, K., Akiba, T.
PDB entry 2z19: Phase transition of monoclinic lysozyme crystal soaked in a saturated NaCl solution
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2007-05-08
Authors: Harata, K., Akiba, T.
PDB entry 2z1a: Crystal structure of 5'-nucleotidase precursor from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2007-05-08
Authors: Nakagawa, N., Kishishita, S., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z1b: Crystal Structure of 5-aminolevulinic acid dehydratase (ALAD) from Mus musculs
Classification: LYASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2007-05-08
Authors: Xie, Y., Wang, H., Kawazoe, M., Kishishita, S., Murayama, K., Takemoto, C., Terada, T., Shirozu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z1c: Crystal structure of HypC from Thermococcus kodakaraensis KOD1
Classification: CHAPERONE, METAL BINDING PROTEIN
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-05-08
Authors: Watanabe, S., Matsumi, R., Arai, T., Atomi, H., Imanaka, T., Miki, K.
PDB entry 2z1d: Crystal structure of [NiFe] hydrogenase maturation protein, HypD from Thermococcus kodakaraensis
Classification: METAL BINDING PROTEIN
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2007-05-08
Authors: Watanabe, S., Matsumi, R., Arai, T., Atomi, H., Imanaka, T., Miki, K.
PDB entry 2z1e: Crystal structure of HypE from Thermococcus kodakaraensis (outward form)
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2007-05-08
Authors: Watanabe, S., Matsumi, R., Arai, T., Atomi, H., Imanaka, T., Miki, K.
PDB entry 2z1f: Crystal structure of HypE from Thermococcus kodakaraensis (inward form)
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2007-05-08
Authors: Watanabe, S., Matsumi, R., Arai, T., Atomi, H., Imanaka, T., Miki, K.
PDB entry 2z1g: Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2007-05-08
Authors: You, D.J., Fukuchi, S., Nishikawa, K., Koga, Y., Takano, K., Kanaya, S.
PDB entry 2z1h: Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T92K/Q105K/Q113R/Q115K/N143K/T145K)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2007-05-08
Authors: You, D.J., Fukuchi, S., Nishikawa, K., Koga, Y., Takano, K., Kanaya, S.
PDB entry 2z1i: Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-05-08
Authors: You, D.J., Fukuchi, S., Nishikawa, K., Koga, Y., Takano, K., Kanaya, S.
PDB entry 2z1j: Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K/N143K/T145K)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2007-05-08
Authors: You, D.J., Fukuchi, S., Nishikawa, K., Koga, Y., Takano, K., Kanaya, S.
PDB entry 2z1k: Crystal Structure of Ttha1563 from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-05-08
Authors: Niwa, H., Shimada, A., Matsunaga, E., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z1m: Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
Classification: LYASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-05-09
Authors: Niwa, H., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z1n: Crystal structure of APE0912 from Aeropyrum pernix K1
Classification: OXIDOREDUCTASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-05-10
Authors: Ichimura, T., Yamamura, A., Mimoto, F., Ohtsuka, J., Miyazono, K., Okai, M., Kamo, M., Lee, W.-C., Nagata, K., Tanokura, M.
PDB entry 2z1o: Crystal structure of a photoswitchable GFP-like protein Dronpa in the bright-state
Classification: FLUORESCENT PROTEIN
Source organism: Echinophyllia sp. SC22
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2007-05-10
Authors: Kikuchi, A., Jeyakanthan, J., Taka, J., Shiro, Y., Mizuno, H., Miyawaki, A.
PDB entry 2z1p: The Enterococcus faecalis MSCRAMM ACE binds its ligands by the collagen Hug Model
Classification: CELL ADHESION
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2007-05-11
Authors: Ponnuraj, K.
PDB entry 2z1q: Crystal structure of acyl CoA dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2007-05-11
Authors: Hikima, T., Kawano, Y., Nodake, Y., Kamiya, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2z1s: Beta-glucosidase B from paenibacillus polymyxa complexed with cellotetraose
Classification: HYDROLASE
Source organism: Paenibacillus polymyxa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2007-05-12
Authors: Isorna, P., Sanz-Aparicio, J.
PDB entry 2z1t: Crystal Structure of Hydrogenase Maturation Protein HypE
Classification: LYASE
Source organism: Desulfovibrio vulgaris subsp. vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2007-05-15
Authors: Shomura, Y., Higuchi, Y.
PDB entry 2z1u: Crystal Structure of Hydrogenase Maturation Protein HypE in complex with ATP
Classification: LYASE
Source organism: Desulfovibrio vulgaris subsp. vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-05-15
Authors: Shomura, Y., Higuchi, Y.
PDB entry 2z1v: tRNA guanine transglycosylase E235Q mutant apo structure, pH 8.5
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2007-05-15
Authors: Tidten, N., Stengl, B., Heine, A., Garcia, G.A., Klebe, G., Reuter, K.
PDB entry 2z1w: tRNA guanine transglycosylase TGT E235Q mutant in complex with BDI (2-BUTYL-5,6-DIHYDRO-1H-IMIDAZO[4,5-D]PYRIDAZINE-4,7-DIONE)
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2007-05-16
Authors: Tidten, N., Stengl, B., Heine, A., Garcia, G.A., Klebe, G., Reuter, K.
PDB entry 2z1x: tRNA guanine transglycosylase E235Q mutant in complex with preQ1
Classification: TRANSFERASE
Source organism: Zymomonas mobilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2007-05-16
Authors: Tidten, N., Stengl, B., Heine, A., Garcia, G.A., Klebe, G., Reuter, K.
PDB entry 2z1y: Crystal structure of LysN, alpha-aminoadipate aminotransferase (complexed with N-(5'-phosphopyridoxyl)-L-leucine), from Thermus thermophilus HB27
Classification: TRANSFERASE
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2007-05-16
Authors: Tomita, T., Miyazaki, T., Miyagawa, T., Fushinobu, S., Kuzuyama, T., Nishiyama, M.
PDB entry 2z1z: Crystal structure of LL-Diaminopimelate Aminotransferase from Arabidopsis thaliana complexed with L-malate ion
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2007-05-16
Authors: Watanabe, N., Cherney, M.M., van Belkum, M.J., Marcus, S.L., Flegel, M.D., Clay, M.D., Deyholos, M.K., Vederas, J.C., James, M.N.G.
PDB entry 2z20: Crystal structure of LL-Diaminopimelate Aminotransferase from Arabidopsis thaliana
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2007-05-17
Authors: Watanabe, N., Cherney, M.M., van Belkum, M.J., Marcus, S.L., Flegel, M.D., Clay, M.D., Deyholos, M.K., Vederas, J.C., James, M.N.G.
PDB entry 2z21: Crystal Structure of a five site mutated Cyanovirin-N
Classification: SUGAR BINDING PROTEIN
Source organism: Nostoc ellipsosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2007-05-17
Authors: Fromme, R., Katilene, Z., Fromme, P., Ghirlanda, G.
PDB entry 2z22: Crystal structure of phosphate preplasmic binding protein psts from yersinia pestis
Classification: TRANSPORT PROTEIN,IMMUNE SYSTEM
Source organism: Yersinia pestis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-05-17
Authors: Tanabe, M., Byrne, B., Brown, K.A., Mirza, O., Bertland, T.
PDB entry 2z23: Crystal structure of Y.pestis oligo peptide binding protein OppA with tri-lysine ligand
Classification: PEPTIDE BINDING PROTEIN
Source organism: Yersinia pestis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2007-05-17
Authors: Tanabe, M., Bertland, T., Mirza, O., Byrne, B., Brown, K.A.
PDB entry 2z24: Thr110Ser dihydroorotase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-05-17
Authors: Lee, M., Maher, M.J., Guss, J.M.
PDB entry 2z25: Thr110Val dihydroorotase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2007-05-17
Authors: Lee, M., Maher, M.J., Guss, J.M.
PDB entry 2z26: Thr110Ala dihydroorotase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2007-05-17
Authors: Lee, M., Maher, M.J., Guss, J.M.
PDB entry 2z27: Thr109Ser dihydroorotase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2007-05-17
Authors: Lee, M., Maher, M.J., Guss, J.M.
PDB entry 2z28: Thr109Val dihydroorotase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2007-05-17
Authors: Lee, M., Maher, M.J., Guss, J.M.
PDB entry 2z29: Thr109Ala dihydroorotase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2007-05-17
Authors: Lee, M., Maher, M.J., Guss, J.M.
PDB entry 2z2a: Thr109Gly dihydroorotase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2007-05-17
Authors: Lee, M., Maher, M.J., Guss, J.M.
PDB entry 2z2b: Deletion 107-116 mutant of dihydroorotase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2007-05-17
Authors: Lee, M., Maher, M.J., Guss, J.M.
PDB entry 2z2c: MURA inhibited by unag-cnicin adduct
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2007-05-17
Authors: Steinbach, A., Skarzynski, T., Scheidig, A.J., Klein, C.D.
PDB entry 2z2d: Solution structure of human macrophage elastase (MMP-12) catalytic domain complexed with a gamma-keto butanoic acid inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2007-05-18
Authors: Zheng, X., Ou, L.
PDB entry 2z2e: Crystal Structure of Canine Milk Lysozyme Stabilized against Non-enzymatic Deamidation
Classification: HYDROLASE
Source organism: Canis lupus familiaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2007-05-21
Authors: Nonaka, Y., Akieda, D., Watanabe, N., Tanaka, I., Kamiya, M., Aizawa, T., Nitta, K., Demura, M., Kawano, K.
PDB entry 2z2f: X-ray Crystal Structure of Bovine Stomach Lysozyme
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2007-05-21
Authors: Akieda, D., Nonaka, Y., Watanabe, N., Tanaka, I., Kamiya, M., Aizawa, T., Nitta, K., Demura, M., Kawano, K.
PDB entry 2z2g: NMR Structure of the IQ-modified Dodecamer CTC[IQ]GGCGCCATC
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2007-05-22
Authors: Wang, F., Elmquist, C.E., Stover, J.S., Rizzo, C.J., Stone, M.P.