LiteFold/PDB huggingface dataset:
PDB entry 6t7n: Trypanosoma cruzi farnesyl diphosphate synthase in complex with IPP and Mn
Classification: TRANSFERASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2019-10-22
Authors: Magari, F., Heine, A., Klebe, G.
PDB entry 6t7o: X-ray structure of the C-terminal domain of S. aureus Hibernating Promoting Factor (CTD-SaHPF)
Classification: RIBOSOMAL PROTEIN
Source organism: Staphylococcus aureus (strain NCTC 8325)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.60004 Å
Deposited: 2019-10-22
Authors: Fatkhullin, B.F., Khusainov, I.S., Ayupov, R.K., Gabdulkhakov, A.G., Tishchenko, S.V., Validov, S.Z., Yusupov, M.M.
PDB entry 6t7p: human plasmakallikrein protease domain in complex with active site directed inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.416 Å
Deposited: 2019-10-22
Authors: Renatus, M.
PDB entry 6t7q: Human Aldose Reductase Mutant L301A in Complex with a Ligand with an IDD Structure (3-({[2-(carboxymethoxy)-4-fluorobenzoyl]amino}methyl)benzoic acid)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2019-10-23
Authors: Hubert, L.-S., Ley, M., Heine, A., Klebe, G.
PDB entry 6t7s: MexB structure solved by cryo-EM in nanodisc in absence of its protein partners
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2019-10-23
Authors: Glavier, M., Schoehn, G., Taveau, J.C., Phan, G., Daury, L., Lambert, O., Broutin, I.
PDB entry 6t7t: Structure of yeast 80S ribosome stalled on poly(A) tract.
Classification: TRANSLATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-10-23
Authors: Tesina, P., Buschauer, R., Cheng, J., Berninghausen, O., Becker, R., Beckmann, R.
PDB entry 6t7u: Carborane inhibitor of Carbonic Anhydrase IX
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2019-10-23
Authors: Brynda, J., Rezacova, P., Kugler, M., Gruner, B.
PDB entry 6t7v: KEAP1 IN COMPLEX WITH PEPTIDE 8
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2019-10-23
Authors: Colarusso, S.
PDB entry 6t7x: Crystal structure of PCNA from P. abyssi
Classification: REPLICATION
Source organism: Pyrococcus abyssi (strain GE5 / Orsay)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-10-23
Authors: Madru, C., Raia, P., Hugonneau Beaufet, I., Delarue, M., Carroni, M., Sauguet, L.
PDB entry 6t7y: Structure of PCNA bound to cPIP motif of DP2 from P. abyssi
Classification: REPLICATION
Source organism: Pyrococcus abyssi; Pyrococcus abyssi (strain GE5 / Orsay)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-10-23
Authors: Madru, C., Raia, P., Hugonneau Beaufet, I., Delarue, M., Carroni, M., Sauguet, L.
PDB entry 6t7z: KEAP1 IN COMPLEX WITH COMPOUND 44
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-10-23
Authors: Colarusso, S.
PDB entry 6t80: Human 14-3-3 sigma fused to the AANAT peptide including phosphoserine-205
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2019-10-23
Authors: Sluchanko, N.N., Tugaeva, K.V., Titterington, J., Antson, A.A.
PDB entry 6t81: Human Carbonic anhydrase II bound by 2-Naphthalenesulfonamide.
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 0.98 Å
Deposited: 2019-10-23
Authors: Smirnov, A., Manakova, E., Grazulis, S.
PDB entry 6t82: 3C-like protease from Southampton virus complexed with FMOPL000542a.
Classification: HYDROLASE
Source organism: Southampton virus (serotype 3); Southampton virus (strain GI/Human/United Kingdom/Southampton/1991)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2019-10-23
Authors: Guo, J., Cooper, J.B.
PDB entry 6t83: Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
Classification: TRANSLATION
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2019-10-24
Authors: Tesina, P., Buschauer, R., Cheng, J., Berninghausen, O., Becker, R., Beckmann, R.
PDB entry 6t84: crystal structure of the mycobacterial trehalose monomycolate transport factor A, TtfA
Classification: LIPID TRANSPORT
Source organism: Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2019-10-24
Authors: Blaise, M.
PDB entry 6t85: Urocanate reductase in complex with ADP
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2019-10-24
Authors: Venskutonyte, R., Lindkvist-Petersson, K.
PDB entry 6t86: Urocanate reductase in complex with FAD
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2019-10-24
Authors: Venskutonyte, R., Lindkvist-Petersson, K.
PDB entry 6t87: Urocanate reductase in complex with urocanate
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2019-10-24
Authors: Venskutonyte, R., Lindkvist-Petersson, K.
PDB entry 6t88: Urocanate reductase in complex with imidazole propionate
Classification: OXIDOREDUCTASE
Source organism: Shewanella oneidensis (strain MR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2019-10-24
Authors: Venskutonyte, R., Lindkvist-Petersson, K.
PDB entry 6t89: Thrombin in complex with (S)-N-(tert-butyl)-4-(3-(3-carbamimidoylphenyl)-2-((2',4'-dimethoxy-[1,1'-biphenyl])-3-sulfonamido)propanoyl)piperazine-1-carboxamide (MI-498)
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-10-24
Authors: Ngaha, S.A., Sandner, A., Huber, S., Heine, A., Steinmetzer, T., Pilgram, O.
PDB entry 6t8a: Thrombin in complex with diphenyl ((4-carbamimidoylphenyl)((S)-1-((R)-3-cyclohexyl 2-((phenylmethyl)sulfonamido)propanoyl)pyrrolidine-2-carboxamido)methyl)phosphonate (MI-492)
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2019-10-24
Authors: Ngaha, S.A., Sandner, A., Huber, S., Heine, A., Steinmetzer, T., Pilgram, O.
PDB entry 6t8b: FtsK motor domain with dsDNA, translocating state
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2019-10-24
Authors: Jean, N.L., Lowe, J.
PDB entry 6t8c: Crystal structure of formate dehydrogenase FDH2 enzyme from Granulicella mallensis MP5ACTX8 in the apo form.
Classification: OXIDOREDUCTASE
Source organism: Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2019-10-24
Authors: Robescu, M.S., Rubini, R., Filippini, F., Bergantino, B., Cendron, L.
PDB entry 6t8d: The cytotoxin MakB from Vibrio cholerae
Classification: TOXIN
Source organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2019-10-24
Authors: Persson, K., Nagampalli, R.
PDB entry 6t8e: Crystal structure of native xylose isomerase from Piromyces E2 grown in yeast, in complex with xylose
Classification: ISOMERASE
Source organism: Piromyces sp. (strain E2)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2019-10-24
Authors: Rozeboom, H.J., Janssen, D.B.
PDB entry 6t8f: Crystal structure of mutant xylose isomerase (V270A/A273G) from Piromyces E2 grown in yeast, in complex with xylose
Classification: ISOMERASE
Source organism: Piromyces sp. (strain E2)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-10-24
Authors: Rozeboom, H.J., Janssen, D.B.
PDB entry 6t8g: Stalled FtsK motor domain bound to dsDNA
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.34 Å
Deposited: 2019-10-24
Authors: Jean, N.L., Lowe, J.
PDB entry 6t8h: Cryo-EM structure of the DNA-bound PolD-PCNA processive complex from P. abyssi
Classification: REPLICATION
Source organism: Pyrococcus abyssi; Pyrococcus abyssi (strain GE5 / Orsay); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2019-10-24
Authors: Madru, C., Raia, P., Hugonneau Beaufet, I., Pehau-Arnaudet, G., England, P., Lindhal, E., Delarue, M., Carroni, M., Sauguet, L.
PDB entry 6t8i: Crystal structure of wild type EndoBT-3987 from Bacteroides thetaiotamicron VPI-5482
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2019-10-24
Authors: Trastoy, B., Du, J.J., Klontz, E.H., Cifuente, J.O., Sundberg, E.J., Guerin, M.E.
PDB entry 6t8k: Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 in complex with Man9GlcNAc product in P1
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-10-24
Authors: Trastoy, B., Du, J.J., Klontz, E.H., Cifuente, J.O., Sundberg, E.J., Guerin, M.E.
PDB entry 6t8l: Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 with Man9GlcNAc product in P212121
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-10-24
Authors: Trastoy, B., Du, J.J., Klontz, E.H., Cifuente, J.O., Sundberg, E.J., Guerin, M.E.
PDB entry 6t8m: Prolyl Hydroxylase (PHD) involved in hypoxia sensing by Dictyostelium discoideum
Classification: OXIDOREDUCTASE
Source organism: Dictyostelium discoideum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2019-10-24
Authors: Chowdhury, R., McDonough, M.A., Liu, T., Clifton, I.J., Schofield, C.J.
PDB entry 6t8n: Crystal structure of the ACVR1 (ALK2) kinase in complex with the compound M4K3007
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2019-10-24
Authors: Adamson, R.J., Williams, E.P., Bonomo, S., Rankin, S., Bacos, D., Rae, A., Cramp, S., Burgess-Brown, N., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bullock, A.N.
PDB entry 6t8o: Stalled FtsK motor domain bound to dsDNA end
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.99 Å
Deposited: 2019-10-24
Authors: Jean, N.L., Lowe, J.
PDB entry 6t8p: HKATII IN COMPLEX WITH LIGAND (2R)-N-benzyl-1-[6-methyl-5-(oxan-4-yl)-7-oxo-6H,7H-[1,3]thiazolo[5,4-d]pyrimidin-2-yl]pyrrolidine-2-carboxamide
Classification: TRANSFERASE
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2019-10-24
Authors: Blaesse, M., Venalainen, J.
PDB entry 6t8q: HKATII IN COMPLEX WITH LIGAND (2R)-N-benzyl-1-[6-methyl-5-(oxan-4-yl)-7-oxo-6H,7H-[1,3]thiazolo[5,4-d]pyrimidin-2-yl]pyrrolidine-2-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2019-10-24
Authors: Blaesse, M., Venalainen, J.
PDB entry 6t8r: 3C-like protease from Southampton virus complexed with FMOPL000605a.
Classification: HYDROLASE
Source organism: Southampton virus (serotype 3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2019-10-24
Authors: Guo, J., Cooper, J.B.
PDB entry 6t8s: Structure of the major Type IV pilin PilA1 from Clostridium difficile
Classification: PROTEIN FIBRIL
Source organism: Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-10-24
Authors: Crawshaw, A.D., Basle, A., Salgado, P.S.
PDB entry 6t8t: 3C-like protease from Southampton virus complexed with FMOPL000603a.
Classification: HYDROLASE
Source organism: Southampton virus (serotype 3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2019-10-24
Authors: Guo, J., Cooper, J.B.
PDB entry 6t8u: Complement factor B in complex with 5-Bromo-3-chloro-N-(4,5-dihydro-1H-imidazol-2-yl)-7-methyl-1H-indol-4-amine
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2019-10-25
Authors: Mainolfi, N., Ehara, T., Karki, R.G., Anderson, K., Mac Sweeney, A., Wiesmann, C., Adams, C., Liao, S.-M., Argikar, U.A., Jendza, K., Zhang, C., Powers, J., Klosowski, D.W., Crowley, M., Kawanami, T., Ding, J., April, M., Forster, C., Serrano-Wu, M., Capparelli, M., Ramqaj, R., Solovay, C., Cumin, F., Smith, T.M., Ferrara, L., Lee, W., Long, D., Prentiss, M., De Erkenez, A., Yang, L., Fang, L., Sellner, H., Sirockin, F., Valeur, E., Erbel, P., Ramage, P., Gerhartz, B., Schubart, A., Flohr, S., Gradoux, N., Feifel, R., Vogg, B., Maibaum, J., Eder, J., Sedrani, R., Harrison, R.A., Mogi, M., Jaffee, B.D., Adams, C.M.
PDB entry 6t8v: Complement factor B in complex with (S)-5,7-Dimethyl-4-((2-phenylpiperidin-1-yl)methyl)-1H-indole
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2019-10-25
Authors: Mainolfi, N., Ehara, T., Karki, R.G., Anderson, K., Mac Sweeney, A., Wiesmann, C., Adams, C., Mainolfi, N., Liao, S.-M., Argikar, U.A., Jendza, K., Zhang, C., Powers, J., Klosowski, D.W., Crowley, M., Kawanami, T., Ding, J., April, M., Forster, C., Serrano-Wu, M., Capparelli, M., Ramqaj, R., Solovay, C., Cumin, F., Smith, T.M., Ferrara, L., Lee, W., Long, D., Prentiss, M., De Erkenez, A., Yang, L., Fang, L., Sellner, H., Sirockin, F., Valeur, E., Erbel, P., Ramage, P., Gerhartz, B., Schubart, A., Flohr, S., Gradoux, N., Feifel, R., Vogg, B., Wiesmann, C., Maibaum, J., Eder, J., Sedrani, R., Harrison, R.A., Mogi, M., Jaffee, B.D., Adams, C.M.
PDB entry 6t8w: Complement factor B in complex with (-)-4-(1-((5,7-Dimethyl-1H-indol-4-yl)methyl)piperidin-2-yl)benzoic acid
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-10-25
Authors: Mainolfi, N., Ehara, T., Karki, R.G., Anderson, K., Sweeney, A.M., Wiesmann, C., Adams, C., Mainolfi, N., Liao, S.M., Argikar, U.A., Jendza, K., Zhang, C., Powers, J., Klosowski, D.W., Crowley, M., Kawanami, T., Ding, J., April, M., Forster, C., Wu, M.S., Capparelli, M., Ramqaj, R., Solovay, C., Cumin, F., Smith, T.M., Ferrara, L., Lee, W., Long, D., Prentiss, M., Erkenez, A.D., Yang, L., Fang, L., Sellner, H., Sirockin, F., Valeur, E., Erbel, P., Ramage, P., Gerhartz, B., Schubart, A., Flohr, S., Gradoux, N., Feifel, R., Vogg, B., Wiesmann, C., Maibaum, J., Eder, J., Sedrani, R., Harrison, R.A., Mogi, M., Jaffee, B.D., Adams, C.M.
PDB entry 6t8x: Crystal structure of MAPKAPK2 (MK2) complexed with PF-3644022 and 5-(4-bromophenyl)-N-[4-(1-piperazinyl)phenyl]-N-(2-pyridinylmethyl)-2-furancarboxamide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2019-10-25
Authors: Beaumont, E.J., Barker, J.
PDB entry 6t8y: NAD+-dependent fungal formate dehydrogenase from Chaetomium thermophilum: A complex with the reduced form of the cofactor NADH and the substrate formate at a secondary site.
Classification: CYTOSOLIC PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2019-10-25
Authors: Isupov, M.N., Yelmazer, B., De Rose, S.A., Littlechild, J.A.
PDB entry 6t8z: NAD+-dependent fungal formate dehydrogenase from Chaetomium thermophilum: A ternary complex with the oxidised form of the cofactor NAD+ and the substrate formate both at a primary and secondary sites.
Classification: CYTOSOLIC PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2019-10-25
Authors: Isupov, M.N., Yelmazer, B., De Rose, S.A., Littlechild, J.A.
PDB entry 6t90: OCT4-SOX2-bound nucleosome - SHL-6
Classification: TRANSCRIPTION
Source organism: Aequorea victoria; Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2019-10-25
Authors: Michael, A.K., Kempf, G., Cavadini, S., Bunker, R.D., Thoma, N.H.
PDB entry 6t92: NAD+-dependent fungal formate dehydrogenase from Chaetomium thermophilum: A complex of N120C mutant protein with the reduced form of the cofactor NADH and the substrate formate at a secondary site.
Classification: CYTOSOLIC PROTEIN
Source organism: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2019-10-25
Authors: Isupov, M.N., Yelmazer, B., De Rose, S.A., Littlechild, J.A.
PDB entry 6t93: Nucleosome with OCT4-SOX2 motif at SHL-6
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2019-10-25
Authors: Michael, A.K., Kempf, G., Cavadini, S., Bunker, R.D., Thoma, N.H.
PDB entry 6t94: NAD+-dependent fungal formate dehydrogenase from Chaetomium thermophilum: A complex of N120C mutant protein with the reduced form of the cofactor NADH.
Classification: CYTOSOLIC PROTEIN
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2019-10-25
Authors: Isupov, M.N., Yelmazer, B., De Rose, S.A., Littlechild, J.A.
PDB entry 6t95: Trypanothione Reductase from Leismania infantum in complex with 4a
Classification: FLAVOPROTEIN
Source organism: Leishmania infantum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2019-10-25
Authors: Carriles, A.A., Hermoso, J.A.
PDB entry 6t96: Photorhabdus laumondii subsp. laumondii lectin PLL3
Classification: SUGAR BINDING PROTEIN
Source organism: Photorhabdus laumondii subsp. laumondii TTO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2019-10-26
Authors: Melicher, F., Houser, J., Fujdiarova, E., Faltinek, L., Wimmerova, M.
PDB entry 6t97: Trypanothione Reductase from Leismania infantum in complex with TRL190
Classification: FLAVOPROTEIN
Source organism: Leishmania infantum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2019-10-26
Authors: Carriles, A., Hermoso, J.A.
PDB entry 6t98: Trypanothione Reductase from Leishmania infantum in complex with 9a
Classification: FLAVOPROTEIN
Source organism: Leishmania infantum
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2019-10-26
Authors: Carriles, A.A., Hermoso, J.A.
PDB entry 6t99: Crystal structrue of RSL W31YW76Y lectin mutant in complex with alpha-methylfucoside
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-10-26
Authors: Houser, J., Kozmon, S., Wimmerova, M.
PDB entry 6t9a: Crystal structrue of RSL W31FW76F lectin mutant in complex with L-fucose
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-10-26
Authors: Houser, J., Kozmon, S., Wimmerova, M.
PDB entry 6t9b: Crystal structrue of RSL W31A lectin mutant in complex with alpha-methylfucoside
Classification: SUGAR BINDING PROTEIN
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2019-10-26
Authors: Houser, J., Komarek, J., Kozmon, S., Wimmerova, M.
PDB entry 6t9c: Crystal structure of the complex between PPARgamma LBD and the ligand NV1346 (3a)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-10-27
Authors: Pochetti, G., Montanari, R., Capelli, D.
PDB entry 6t9d: Crystal structure of a bispecific DutaFab in complex with human VEGF121
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.905 Å
Deposited: 2019-10-28
Authors: Kimbung, R., Logan, D.T., Beckmann, R., Jensen, K., Speck, J., Fenn, S., Kettenberger, H.
PDB entry 6t9e: Crystal structure of a bispecific DutaFab in complex with human PDGF
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.989 Å
Deposited: 2019-10-28
Authors: Kimbung, R., Logan, D.T., Beckmann, R., Jensen, K., Speck, J., Fenn, S., Kettenberger, H.
PDB entry 6t9f: CRYSTAL STRUCTURE OF EN ENDOGLUCANASE S308P FROM PENICILLIUM VERRUCULOSUM
Classification: HYDROLASE
Source organism: Talaromyces verruculosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24847 Å
Deposited: 2019-10-28
Authors: Nemashkalov, V., Kravchenko, O., Gabdulkhakov, A., Tischenko, S., Rozhkova, A., Sinitsyn, A.
PDB entry 6t9g: CRYSTAL STRUCTURE OF AN ENDOGLUCANASE D213A FROM PENICILLIUM VERRUCULOSUM
Classification: HYDROLASE
Source organism: Talaromyces verruculosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29621 Å
Deposited: 2019-10-28
Authors: Nemashkalov, V., Kravchenko, O., Gabdulkhakov, A., Tischenko, S., Rozhkova, A., Sinitsyn, A.
PDB entry 6t9h: C171S mutant of Linalool Dehydratase Isomerase
Classification: LYASE
Source organism: Castellaniella defragrans 65Phen
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2019-10-28
Authors: Cuetos, A., Zukic, E., Danesh-Azari, H.R., Grogan, G.
PDB entry 6t9i: cryo-EM structure of transcription coactivator SAGA
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-10-28
Authors: Wang, H., Cheung, A., Cramer, P.
PDB entry 6t9j: SAGA Tra1 module
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2019-10-28
Authors: Wang, H., Cheung, A., Cramer, P.
PDB entry 6t9k: SAGA Core module
Classification: GENE REGULATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2019-10-28
Authors: Wang, H., Cheung, A., Cramer, P.
PDB entry 6t9l: SAGA DUB module bound to a ubiqitinated nucleosome
Classification: GENE REGULATION
Source organism: Homo sapiens; Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2019-10-28
Authors: Wang, H., Cramer, P.
PDB entry 6t9m: Crystal structure of the Chitinase Domain of the Spore Coat Protein CotE from Clostridium difficile
Classification: STRUCTURAL PROTEIN
Source organism: Peptoclostridium difficile (strain 630); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2019-10-28
Authors: Whittingham, J.L., Dodson, E.J., Wilkinson, A.J.
PDB entry 6t9n: CryoEM structure of human polycystin-2/PKD2 in UDM supplemented with PI(4,5)P2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2019-10-28
Authors: Wang, Q., Pike, A.C.W., Grieben, M., Baronina, A., Nasrallah, C., Shintre, C., Edwards, A.M., Arrowsmith, C.H., Bountra, C., Carpenter, E.P., Structural Genomics Consortium (SGC)
PDB entry 6t9o: CryoEM structure of human polycystin-2/PKD2 in UDM supplemented with PI(3,5)P2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2019-10-28
Authors: Wang, Q., Pike, A.C.W., Grieben, M., Baronina, A., Nasrallah, C., Shintre, C., Edwards, A.M., Arrowsmith, C.H., Bountra, C., Carpenter, E.P., Structural Genomics Consortium (SGC)
PDB entry 6t9p: Human Butyrylcholinesterase in complex with 2-(N-hydroxyimino)-N-[(1R)-3-{4-[(2-methyl-1H-imidazol-1-yl)methyl]-1H-1,2,3-triazol-1-yl}-1- phenylpropyl]acetamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-10-28
Authors: Brazzolotto, X., Sinko, G., Marakovic, N., Knezevic, A.
PDB entry 6t9q: Crystal structure of the second, C-terminal repeat of the DNA-binding domain of human TImeless
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2019-10-28
Authors: Pellegrini, L., Holzer, S.
PDB entry 6t9r: Aplysia californica AChBP in complex with a cytisine derivative
Classification: HYDROLASE
Source organism: Aplysia californica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2019-10-28
Authors: Davis, S., Hunter, W.N.
PDB entry 6t9s: Human Butyrylcholinesterase in complex with 2-(N-hydroxyimino)-N-[(1S)-3-{4-[(2-methyl-1H-imidazol-1-yl)methyl]-1H-1,2,3-triazol-1-yl}-1- phenylpropyl]acetamide
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2019-10-28
Authors: Brazzolotto, X., Sinko, G., Marakovic, N., Knezevic, A.
PDB entry 6t9t: Matriptase in complex with the synthetic inhibitor (S)-3-(3-(4-(3-(tert-butyl)ureido)piperidin-1-yl)-2-((3'-fluoro-4'-(hydroxymethyl)-[1,1'-biphenyl])-3-sulfonamido)-3-oxopropyl)benzimidamide (MI-1904)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2019-10-28
Authors: Mueller, J.M., Merkl, S., Keils, A., Pilgram, O., Steinmetzer, T.
PDB entry 6t9u: Bovine Trypsine in complex with the synthetic inhibitor (S)-3'-(N-(1-(4-(3-(tert-butyl)ureido)piperidin-1-yl)-3-(3-carbamimidoylphenyl)-1-oxopropan-2-yl)sulfamoyl)-[1,1'-biphenyl]-3-carboximidamide (MI-490)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06751 Å
Deposited: 2019-10-28
Authors: Mueller, J.M., Merkl, S., Keils, A., Pilgram, O., Steinmetzer, T.
PDB entry 6t9v: Bovine Trypsin in complex with the synthetic inhibitor (S)-3-(3-(4-(3-(tert-butyl)ureido)piperidin-1-yl)-2-((3'-fluoro-4'-(hydroxymethyl)-[1,1'-biphenyl])-3-sulfonamido)-3-oxopropyl)benzimidamide (MI-1904)
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12643 Å
Deposited: 2019-10-28
Authors: Merkl, S., Keils, A., Mueller, J.M., Pilgram, O., Steinmetzer, T.
PDB entry 6t9w: Crystal structure of formate dehydrogenase FDH2 D222A/Q223R enzyme from Granulicella mallensis MP5ACTX8 in complex with NADP and azide.
Classification: OXIDOREDUCTASE
Source organism: Granulicella mallensis MP5ACTX8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2019-10-29
Authors: Robescu, M.S., Rubini, R., Filippini, F., Bergantino, B., Cendron, L.
PDB entry 6t9x: Crystal structure of formate dehydrogenase FDH2 D222Q/Q223R mutant enzyme from Granulicella mallensis MP5ACTX8 in complex with NADP and Azide.
Classification: OXIDOREDUCTASE
Source organism: Granulicella mallensis MP5ACTX8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2019-10-29
Authors: Robescu, M.S., Rubini, R., Filippini, F., Bergantino, B., Cendron, L.
PDB entry 6t9y: CARBOXYPEPTIDASE T WITH N-SULFAMOYL-L-LYSIN
Classification: HYDROLASE
Source organism: Thermoactinomyces vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2019-10-29
Authors: Timofeev, V.I., Akparov, V.K., Kuranova, I.P.
PDB entry 6t9z: Nidocarborane inhibitor of Carbonic Anhydrase IX
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2019-10-29
Authors: Brynda, J., Rezacova, P., Kugler, M., Gruner, B.
PDB entry 6ta0: Human NAMPT in complex with nicotinic acid and phosphoribosyl pyrophosphate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2019-10-29
Authors: Houry, D., Raasakka, A., Kursula, P., Ziegler, M.
PDB entry 6ta1: Fatty acid synthase of S. cerevisiae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2019-10-29
Authors: Vonck, J., D'Imprima, E., Joppe, M., Grininger, M.
PDB entry 6ta2: Human NAMPT in complex with nicotinic acid mononucleotide and phosphate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2019-10-29
Authors: Houry, D., Raasakka, A., Kursula, P., Ziegler, M.
PDB entry 6ta3: Human kinesin-5 motor domain in the GSK-1 state bound to microtubules (Conformation 1)
Classification: CELL CYCLE
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-10-29
Authors: Pena, A., Sweeney, A., Cook, A.D., Moores, C.A., Topf, M.
PDB entry 6ta4: Human kinesin-5 motor domain in the AMPPNP state bound to microtubules
Classification: CELL CYCLE
Source organism: Homo sapiens; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2019-10-29
Authors: Pena, A.P., Sweeney, A., Cook, A.D., Moores, C.A., Topf, M.
PDB entry 6ta5: OprM-MexA complex from the MexAB-OprM Pseudomonas aeruginosa whole assembly reconstituted in nanodiscs
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-10-29
Authors: Glavier, M., Schoehn, G., Taveau, J.C., Phan, G., Daury, L., Lambert, O., Broutin, I.
PDB entry 6ta6: MexAB assembly of the Pseudomonas MexAB-OprM efflux pump reconstituted in nanodiscs
Classification: ANTIMICROBIAL PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-10-29
Authors: Glavier, M., Schoehn, G., Taveau, J.C., Phan, G., Daury, L., Lambert, O., Broutin, I.
PDB entry 6ta7: CRYSTAL STRUCTURE OF HUMAN G3BP1-NTF2 IN COMPLEX WITH HUMAN CAPRIN1-DERIVED SOLOMON MOTIF
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2019-10-29
Authors: Schulte, T., Achour, A., Panas, M.D., McInerney, G.M.
PDB entry 6ta8: Crystal structure of the epimerization domain from the third module of tyrocidine synthetase B, TycB3(E)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Brevibacillus parabrevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2019-10-29
Authors: Fage, C.D., Marahiel, M.A.
PDB entry 6ta9: Bd0314 DslA wild-type form 1
Classification: HYDROLASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.361 Å
Deposited: 2019-10-29
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6taa: STRUCTURE AND MOLECULAR MODEL REFINEMENT OF ASPERGILLUS ORYZAE (TAKA) ALPHA-AMYLASE: AN APPLICATION OF THE SIMULATED-ANNEALING METHOD
Classification: HYDROLASE(O-GLYCOSYL)
Source organism: Aspergillus oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 1992-08-21
Authors: Swift, H.J., Brady, L., Derewenda, Z.S., Dodson, E.J., Turkenburg, J.P., Wilkinson, A.J.
PDB entry 6tab: Bd0314 DslA wild-type form 2
Classification: HYDROLASE
Source organism: Bdellovibrio bacteriovorus HD100
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2019-10-29
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6tac: Human NAMPT deletion mutant in complex with nicotinamide mononucleotide, pyrophosphate, and Mg2+
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-10-29
Authors: Houry, D., Raasakka, A., Kursula, P., Ziegler, M.
PDB entry 6tad: Bd0314 DslA E143Q mutant
Classification: HYDROLASE
Source organism: Bdellovibrio bacteriovorus HD100
Experimental method: X-RAY DIFFRACTION
Resolution: 1.822 Å
Deposited: 2019-10-29
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6tae: Neutron structure of ferric ascorbate peroxidase
Classification: OXIDOREDUCTASE
Source organism: Glycine max
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2019-10-29
Authors: Kwon, H., Basran, J., Devos, J.M., Schrader, T.E., Ostermann, A., Blakeley, M.P., Raven, E.L., Moody, P.C.E.
PDB entry 6taf: Bd0314 DslA E154Q mutant
Classification: HYDROLASE
Source organism: Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.336 Å
Deposited: 2019-10-29
Authors: Lovering, A.L., Harding, C.J.
PDB entry 6tah: Crystal structure of a Nu-class Glutathione-S-Transferase from Pseudomonas aeruginosa PACS2 bound to glutathione
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2019-10-29
Authors: Feiler, C.G., Blankenfeldt, W.
PDB entry 6tai: Crystal structure of Escherichia coli Orotate Phosphoribosyltransferase with an empty active site at 1.55 Angstrom resolution
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.551 Å
Deposited: 2019-10-29
Authors: Navas-Yuste, S., Lopez-Estepa, M., Gomez, S., Fernandez, F.J., Vega, M.C.
PDB entry 6taj: Crystal structure of Escherichia coli Orotate Phosphoribosyltransferase in complex with Orotic acid 1.60 Angstrom resolution
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-10-29
Authors: Navas-Yuste, S., Lopez-Estepa, M., Gomez, S., Fernandez, F.J., Vega, M.C.
PDB entry 6tak: Crystal structure of Escherichia coli Orotate Phosphoribosyltransferase in complex with Orotic acid and Sulfate at 1.25 Angstrom resolution
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2019-10-29
Authors: Navas-Yuste, S., Lopez-Estepa, M., Gomez, S., Fernandez, F.J., Vega, M.C.
PDB entry 6tal: 3C-like protease from Southampton virus complexed with FMOPL000227a.
Classification: HYDROLASE
Source organism: Southampton virus (serotype 3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2019-10-29
Authors: Guo, J., Cooper, J.B.
PDB entry 6tam: X-RAY STRUCTURE OF HUMAN K-RAS G12C IN COMPLEX WITH COVALENT ISOQUINOLINONE INHIBITOR (COMPOUND 3)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2019-10-30
Authors: Friberg, A., Nguyen, D.
PDB entry 6tan: X-RAY STRUCTURE OF HUMAN K-RAS G12C IN COMPLEX WITH COVALENT ISOQUINOLINONE INHIBITOR (COMPOUND 17)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2019-10-30
Authors: Hillig, R.C., Eis, K., Badock, V.
PDB entry 6tao: The cytotoxin MakE from Vibrio cholerae
Classification: TOXIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2019-10-30
Authors: Persson, K., Nagampalli, R., Heidler, T., Wai, S.N.
PDB entry 6tap: Structure of the dArc1 capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2019-10-30
Authors: Erlendsson, S., Morado, D.R., Shepherd, J.D., Briggs, J.A.G.
PDB entry 6taq: Structure of the dArc2 capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2019-10-30
Authors: Erlendsson, S., Morado, D.R., Shepherd, J.D., Briggs, J.A.G.
PDB entry 6tar: Structure of the five-fold capsomer of the dArc1 capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2019-10-30
Authors: Erlendsson, S., Morado, D.R., Shepherd, J.D., Briggs, J.A.G.
PDB entry 6tas: Structure of the two-fold capsomer of the dArc1 capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2019-10-30
Authors: Erlendsson, S., Morado, D.R., Shepherd, J.D., Briggs, J.A.G.
PDB entry 6tat: Structure of the five-fold capsomer of the dArc2 capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-10-30
Authors: Erlendsson, S., Morado, D.R., Shepherd, J.D., Briggs, J.A.G.
PDB entry 6tau: Structure of the two-fold capsomer of the dArc2 capsid
Classification: VIRUS LIKE PARTICLE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2019-10-30
Authors: Erlendsson, S., Morado, D.R., Shepherd, J.D., Briggs, J.A.G.
PDB entry 6tav: Crystal structure of endopeptidase-induced alpha2-macroglobulin
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.2 Å
Deposited: 2019-10-30
Authors: Gomis-Ruth, F.X., Duquerroy, S., Trapani, S., Marrero, A., Goulas, T., Guevara, T., Andersen, G.A., Sottrup-Jensen, L., Navaza, J.
PDB entry 6taw: 3C-like protease from Southampton virus complexed with FMOPL000411a.
Classification: HYDROLASE
Source organism: Southampton virus (serotype 3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2019-10-30
Authors: Guo, J., Cooper, J.B.
PDB entry 6tax: Mouse RNF213 wild type protein
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-10-31
Authors: Ahel, J., Meinhart, A., Haselbach, D., Clausen, T.
PDB entry 6tay: Mouse RNF213 mutant R4753K modeling the Moyamoya-disease-related Human variant R4810K
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2019-10-31
Authors: Ahel, J., Meinhart, A., Haselbach, D., Clausen, T.
PDB entry 6taz: Timeless couples G quadruplex detection with processing by DDX11 during DNA replication
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2019-10-31
Authors: Lerner Koch, L., Holzer, S., Kilkenny, M.L., Murat, P., Svikovic, S., Schiavone, D., Bittleston, A., Maman, J.D., Branzei, D., Stott, K., Pellegrini, L., Sale, E.J.
PDB entry 6tb0: Crystal structure of thermostable omega transaminase 4-fold mutant from Pseudomonas jessenii
Classification: TRANSFERASE
Source organism: Pseudomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2019-10-31
Authors: Capra, N., Rozeboom, H.J., Thunnissen, A.M.W.H., Janssen, D.B.
PDB entry 6tb1: Crystal structure of thermostable omega transaminase 6-fold mutant from Pseudomonas jessenii
Classification: TRANSFERASE
Source organism: Pseudomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2019-10-31
Authors: Capra, N., Rozeboom, H.J., Thunnissen, A.M.W.H., Janssen, D.B.
PDB entry 6tb2: Structure of human haptoglobin-hemoglobin bound to S. aureus IsdH
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2019-10-31
Authors: Mikkelsen, J.H., Andersen, C.B.F.
PDB entry 6tb3: yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex
Classification: TRANSLATION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2019-10-31
Authors: Buschauer, R., Cheng, J., Berninghausen, O., Tesina, P., Becker, T., Beckmann, R.
PDB entry 6tb4: Structure of SAGA bound to TBP
Classification: TRANSCRIPTION
Source organism: Komagataella phaffii (strain GS115 / ATCC 20864); Komagataella phaffii GS115
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2019-10-31
Authors: Papai, G., Frechard, A., Kolesnikova, O., Crucifix, C., Schultz, P., Ben-Shem, A.
PDB entry 6tb5: The crystal structure of the DPS2 from DEINOCOCCUS RADIODURANS to 1.83A resolution (sequentially soaked in CaCl2 [5mM] for 20 min, then in Ammonium iron(II) sulfate [10mM] for 2h).
Classification: DNA BINDING PROTEIN
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2019-10-31
Authors: Cuypers, M.G., McSweeney, S., Romao, C.V., Mitchell, E.P.
PDB entry 6tb6: Crystal structure of formate dehydrogenase FDH2 D222S/Q223R enzyme from Granulicella mallensis MP5ACTX8 in complex with NADP and azide.
Classification: OXIDOREDUCTASE
Source organism: Granulicella mallensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2019-11-01
Authors: Robescu, M.S., Rubini, R., Filippini, F., Bergantino, B., Cendron, L.
PDB entry 6tb7: Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Adenosine monophosphate (AMP)
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2019-11-01
Authors: Huang, L., Lilley, D.M.J.
PDB entry 6tb8: Dye Type Peroxidase Aa from Streptomyces lividans: spectroscopically-validated ferric state
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans 1326
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2019-11-01
Authors: Lucic, M., Moreno-Chicano, T.M., Hough, M.A., Dworkowski, F.S.N., Worrall, J.A.R.
PDB entry 6tb9: Capsid of native GTA particle computed with C5 symmetry
Classification: VIRUS
Source organism: Rhodobacter capsulatus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2019-11-01
Authors: Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
PDB entry 6tba: Virion of native gene transfer agent (GTA) particle
Classification: VIRUS
Source organism: Rhodobacter capsulatus SB 1003
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.54 Å
Deposited: 2019-11-01
Authors: Bardy, P., Fuzik, T., Hrebik, D., Pantucek, R., Beatty, J.T., Plevka, P.
PDB entry 6tbb: Crystal structure of S. aureus FabI in complex with NADPH and kalimantacin A (batumin)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2019-11-01
Authors: Fage, C.D., Masschelein, J.
PDB entry 6tbc: Crystal structure of S. aureus FabI in complex with NADPH and kalimantacin B
Classification: BIOSYNTHETIC PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2019-11-01
Authors: Fage, C.D., Masschelein, J.
PDB entry 6tbd: Crystal structure of the SVS_A2 protein from ancestral sequence reconstruction at 2.30 A resolution
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces sp. CWA1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2019-11-01
Authors: Rudraraju, R., Schnell, R., Schneider, G.
PDB entry 6tbe: LC3A in complex with (3R,4S,5R,6R)-5-hydroxy-6-((4-hydroxy-3-(4-hydroxy-3-isopentylbenzamido)-8-methyl-2-oxo-2H-chromen-7-yl)oxy)-3-methoxy-2,2-dimethyltetrahydro-2H-pyran-4-yl carbamate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67008 Å
Deposited: 2019-11-01
Authors: Kramer, J.S., Pogoryelov, D., Hartmann, M., Chaikuad, A., Proschak, E.
PDB entry 6tbf: Structure of a beta galactosidase with inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus Ueda107
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-11-01
Authors: Offen, W., Davies, G.
PDB entry 6tbg: Structure of a beta galactosidase with inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus Ueda107
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-11-01
Authors: Offen, W., Davies, G.
PDB entry 6tbh: Structure of a beta galactosidase with inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus Ueda107
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-11-01
Authors: Offen, W., Davies, G.
PDB entry 6tbi: Structure of a beta galactosidase with inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2019-11-01
Authors: Offen, W., Davies, G.
PDB entry 6tbj: Structure of a beta galactosidase with inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus Ueda107
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2019-11-01
Authors: Offen, W., Davies, G.
PDB entry 6tbk: Structure of a beta galactosidase with inhibitor
Classification: HYDROLASE
Source organism: Cellvibrio japonicus Ueda107
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2019-11-01
Authors: Offen, W., Davies, G.
PDB entry 6tbl: Crystal structure of MMS19(CTD)-CIAO1-CIAO2B CIA targeting complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Drosophila melanogaster; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2019-11-01
Authors: Kassube, S.A., Thoma, N.H.
PDB entry 6tbm: Structure of SAGA bound to TBP, including Spt8 and DUB
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii (strain GS115 / ATCC 20864); Komagataella phaffii GS115
Experimental method: ELECTRON MICROSCOPY
Resolution: 20 Å
Deposited: 2019-11-01
Authors: Papai, G., Frechard, A., Kolesnikova, O., Crucifix, C., Schultz, P., Ben-Shem, A.
PDB entry 6tbn: Crystal structure of CIAO1-CIAO2B CIA core complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2019-11-01
Authors: Kassube, S.A., Thoma, N.H.
PDB entry 6tbo: 3C-like protease from Southampton virus complexed with FMOPL000363a.
Classification: HYDROLASE
Source organism: Southampton virus (serotype 3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2019-11-02
Authors: Guo, J., Cooper, J.B.
PDB entry 6tbp: 3C-like protease from Southampton virus complexed with FMOPL000490a.
Classification: HYDROLASE
Source organism: Southampton virus (serotype 3)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2019-11-03
Authors: Guo, J., Cooper, J.B.
PDB entry 6tbq: AA13 Lytic polysaccharide monooxygenase from Aspergillus oryzae partially in Cu(II) state
Classification: OXIDOREDUCTASE
Source organism: Aspergillus oryzae RIB40
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2019-11-04
Authors: Muderspach, S.J., Lo Leggio, L., Tandrup, T., Frandsen, K.E.H., Poulsen, J.C.N.
PDB entry 6tbr: Glycosylated AA13 Lytic polysaccharide monooxygenase from Aspergillus oryzae in P1 space group
Classification: OXIDOREDUCTASE
Source organism: Aspergillus oryzae RIB40
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2019-11-04
Authors: Frandsen, K.E.H., Muderspach, S.J., Tandrup, T., Poulsen, J.C.N., Lo Leggio, L.
PDB entry 6tbt: Crystal structure of the BCL6 BTB domain in complex with an Apt48 peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2019-11-04
Authors: Zacharchenko, T., Wright, S.C.
PDB entry 6tbu: Structure of Drosophila melanogaster Dispatched
Classification: MEMBRANE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2019-11-04
Authors: Korkhov, V.M., Cannac, F.
PDB entry 6tbv: Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)
Classification: RIBOSOME
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2019-11-04
Authors: Herrero del Valle, A., Innis, C.A.