LiteFold/PDB huggingface dataset:
PDB entry 3cxn: Structure of the Urease Accessory Protein UreF from Helicobacter pylori
Classification: CHAPERONE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-04-24
Authors: Lam, R., Johns, K., Romanov, V., Dong, A., Wu-Brown, J., Guthrie, J., Dharamsi, A., Thambipillai, D., Mansoury, K., Edwards, A.M., Pai, E.F., Chirgadze, N.Y.
PDB entry 3cxo: Crystal structure of L-rhamnonate dehydratase from Salmonella typhimurium complexed with Mg and 3-deoxy-L-rhamnonate
Classification: LYASE
Source organism: Salmonella typhimurium LT2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-24
Authors: Fedorov, A.A., Fedorov, E.V., Rakus, J.F., Hubbard, B.K., Gerlt, J.A., Almo, S.C.
PDB entry 3cxp: Crystal structure of human glucosamine 6-phosphate N-acetyltransferase 1 mutant E156A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2008-04-25
Authors: Wang, J., Liu, X., Li, L.-F., Su, X.-D.
PDB entry 3cxq: Crystal structure of human glucosamine 6-phosphate N-acetyltransferase 1 bound to GlcN6P
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-04-25
Authors: Wang, J., Liu, X., Li, L.-F., Su, X.-D.
PDB entry 3cxr: Crystal structure of gluconate 5-dehydrogase from streptococcus suis type 2
Classification: OXIDOREDUCTASE
Source organism: Streptococcus suis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-25
Authors: Peng, H., Gao, F., Zhang, Q., Liu, Y., Gao, G.F.
PDB entry 3cxs: Crystal structure of human GNA1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-04-25
Authors: Wang, J., Liu, X., Li, L.-F., Su, X.-D.
PDB entry 3cxu: Structure of a Y149F mutant of epoxide hydrolase from Solanum tuberosum
Classification: HYDROLASE
Source organism: Solanum tuberosum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-25
Authors: Naworyta, A., Mowbray, S.L., Widersten, M., Thomaeus, A.
PDB entry 3cxv: Crystal structure of the Cytochrome P450 CYP121 A233G mutant from Mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-04-25
Authors: Leys, D.
PDB entry 3cxw: Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a beta carboline ligand I
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-04-25
Authors: Filippakopoulos, P., Bullock, A., Fedorov, O., Huber, K., Bracher, F., Pike, A.C.W., Roos, A., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3cxx: Crystal structure of cytochrome P450 CYP121 F338H from M. tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-04-25
Authors: Leys, D.
PDB entry 3cxy: Crystal structure of the cytochrome P450 CYP121 P346L mutant from M. tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-04-25
Authors: Leys, D.
PDB entry 3cxz: Crystal structure of cytochrome P450 CYP121 R386L mutant from M. tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2008-04-25
Authors: Leys, D.
PDB entry 3cy0: Crystal structure of cytochrome P450 CYP121 S237A mutant from Mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-04-25
Authors: Leys, D.
PDB entry 3cy1: Crystal structure of the cytochrome P450 CYP121 S279A mutant from M. tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-04-25
Authors: Leys, D.
PDB entry 3cy2: Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a beta carboline ligand II
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2008-04-25
Authors: Filippakopoulos, P., Bullock, A., Fedorov, O., Huber, K., Bracher, F., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3cy3: Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and the JNK inhibitor V
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-04-25
Authors: Filippakopoulos, P., Bullock, A., Fedorov, O., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 3cy4: Crystal Structure cation-dependent mannose 6-phosphate receptor at pH 7.4
Classification: PROTEIN TRANSPORT, SUGAR BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2008-04-25
Authors: Olson, L.J., Hindsgaul, O., Dahms, N.M., Kim, J.-J.P.
PDB entry 3cy5: Crystal structure determination of buffalo (Bubalus bubalis) hemoglobin at 2 angstrom resolution
Classification: Oxygen storage, Oxygen transport
Source organism: Bubalus bubalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-25
Authors: Balasubramanian, M., Sathya Moorthy, P., Neelagandan, K., Ponnuswamy, M.N.
PDB entry 3cy6: Crystal Structure of E18Q DJ-1
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2008-04-25
Authors: Witt, A.C., Lakshminarasimhan, M., Remington, B.C., Hasim, S., Pozharski, E., Wilson, M.A.
PDB entry 3cye: Cyrstal structure of the native 1918 H1N1 neuraminidase from a crystal with lattice-translocation defects
Classification: HYDROLASE
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-04-25
Authors: Zhu, X., Xu, X., Wilson, I.A.
PDB entry 3cyf: Crystal Structure of E18N DJ-1
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-04-25
Authors: Witt, A.C., Lakshminarasimhan, M., Remington, B.C., Hasim, S., Pozharski, E., Wilson, M.A.
PDB entry 3cyg: Crystal structure of an uncharacterized protein from Fervidobacterium nodosum Rt17-B1
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Fervidobacterium nodosum Rt17-B1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2008-04-25
Authors: Damodharan, L., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3cyh: CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE SER-PRO
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1996-02-27
Authors: Zhao, Y., Ke, H.
PDB entry 3cyi: Crystal Structure of Human Sulfiredoxin (Srx) in Complex with ATP:Mg2+
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-04-25
Authors: Jonsson, T.J., Murray, M.S., Johnson, L.C., Lowther, W.T.
PDB entry 3cyj: Crystal structure of a mandelate racemase/muconate lactonizing enzyme-like protein from Rubrobacter xylanophilus
Classification: ISOMERASE
Source organism: Rubrobacter xylanophilus DSM 9941
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-04-25
Authors: Bonanno, J.B., Freeman, J., Bain, K.T., Zhang, F., Bravo, J., Smith, D., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3cyl: Crystal structure of Piratoxin I (a myotoxic Lys49-PLA2) complexed with alpha-tocopherol
Classification: TOXIN
Source organism: Bothrops pirajai
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2008-04-25
Authors: dos Santos, J.I., Fontes, M.R.M.
PDB entry 3cym: Crystal structure of protein BAD_0989 from Bifidobacterium adolescentis
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bifidobacterium adolescentis ATCC 15703
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-04-25
Authors: Patskovsky, Y., Ozyurt, S., Freeman, J., Chang, S., Bain, K., Wasserman, S.R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3cyn: The structure of human GPX8
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-25
Authors: Kavanagh, K.L., Johansson, C., Yue, W.W., Kochan, G., Pike, A.C.W., Murray, J., Roos, A.K., Filippakopoulos, P., von Delft, F., Arrowsmith, C.H., Wikstrom, M., Edwards, A.M., Bountra, C., Oppermann, U., Structural Genomics Consortium (SGC)
PDB entry 3cyo: Structure of a longer thermalstable core domain of HIV-1 GP41 containing the enfuvirtide resistance mutation N43D and complementary mutation E137K
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-04-25
Authors: Wang, Z.M., Dwyer, J.J.
PDB entry 3cyp: The crystal structure of the C-terminal domain of Helicobacter pylori MotB (residues 125-256).
Classification: MEMBRANE PROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-04-26
Authors: Roujeinikova, A.
PDB entry 3cyq: The crystal structure of the complex of the C-terminal domain of Helicobacter pylori MotB (residues 125-256) with N-acetylmuramic acid
Classification: MEMBRANE PROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-04-26
Authors: Roujeinikova, A.
PDB entry 3cyr: CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774P
Classification: ELECTRON TRANSPORT
Source organism: Desulfovibrio desulfuricans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 1997-07-24
Authors: Simoes, P., Matias, P.M., Morais, J., Wilson, K., Dauter, Z., Carrondo, M.A.
PDB entry 3cys: DETERMINATION OF THE NMR SOLUTION STRUCTURE OF THE CYCLOPHILIN A-CYCLOSPORIN A COMPLEX
Classification: ISOMERASE/IMMUNOSUPPRESSANT
Source organism: HOMO SAPIENS; TOLYPOCLADIUM INFLATUM
Experimental method: SOLUTION NMR
Deposited: 1994-02-28
Authors: Spitzfaden, C., Braun, W., Wider, G., Widmer, H., Wuthrich, K.
PDB entry 3cyt: REDOX CONFORMATION CHANGES IN REFINED TUNA CYTOCHROME C
Classification: ELECTRON TRANSPORT (HEME PROTEIN)
Source organism: Thunnus alalunga
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1980-07-01
Authors: Takano, T.
PDB entry 3cyu: Human Carbonic Anhydrase II complexed with Cryptophane biosensor and xenon
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-04-26
Authors: Aaron, J.A., Jude, K.M., Di Costanzo, L., Christianson, D.W.
PDB entry 3cyv: Crystal structure of uroporphyrinogen decarboxylase from Shigella flexineri: new insights into its catalytic mechanism
Classification: LYASE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-04-26
Authors: Liu, H., Zhou, H., Bi, R.
PDB entry 3cyw: Effect of Flap Mutations on Structure of HIV-1 Protease and Inhibition by Saquinavir and Darunavir
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-04-27
Authors: Liu, F., Weber, I.T.
PDB entry 3cyx: Crystal structure of HIV-1 mutant I50V and inhibitor saquinavira
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-04-27
Authors: Liu, F., Weber, I.T.
PDB entry 3cyy: The crystal structure of ZO-1 PDZ2 in complex with the Cx43 peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-04-27
Authors: Pan, L., Zhang, M.
PDB entry 3cyz: Dimeric crystal structure of a pheromone binding protein from Apis mellifera in complex with 9-keto-2(E)-decenoic acid at pH 7.0
Classification: Pheromone Binding Protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-04-27
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3cz0: Dimeric crystal structure of a pheromone binding protein from Apis mellifera in complex with the n-butyl benzene sulfonamide at pH 7.0
Classification: Pheromone Binding Protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-04-27
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3cz1: Dimeric crystal structure of a pheromone binding protein from Apis mellifera in complex with the n-butyl benzene sulfonamide at pH 7.0
Classification: Pheromone Binding Protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-04-27
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3cz2: Dimeric crystal structure of a pheromone binding protein from Apis mellifera at pH 7.0
Classification: Pheromone Binding Protein
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-04-27
Authors: Pesenti, M.E., Spinelli, S., Bezirard, V., Briand, L., Pernollet, J.C., Tegoni, M., Cambillau, C.
PDB entry 3cz3: Crystal structure of Tomato Aspermy Virus 2b in complex with siRNA
Classification: VIRAL PROTEIN/RNA
Source organism: Tomato aspermy virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.23 Å
Deposited: 2008-04-27
Authors: Ma, J.B., Li, F., Ding, S.W., Patel, D.J.
PDB entry 3cz4: Native AphA class B acid phosphatase/phosphotransferase from E. coli
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-04-28
Authors: Leone, R., Cappelletti, E., Benvenuti, M., Lentini, G., Thaller, M.C., Mangani, S.
PDB entry 3cz5: Crystal structure of two-component response regulator, LuxR family, from Aurantimonas sp. SI85-9A1
Classification: TRANSCRIPTION REGULATOR
Source organism: Aurantimonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-04-28
Authors: Malashkevich, V.N., Toro, R., Wasserman, S.R., Meyer, A., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3cz6: Crystal Structure of the Rap1 C-terminus
Classification: PROTEIN BINDING
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-04-28
Authors: Feeser, E.A., Wolberger, C.
PDB entry 3cz7: Molecular Basis for the Autoregulation of the Protein Acetyl Transferase Rtt109
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-28
Authors: Hoelz, A., Stavropoulos, P.
PDB entry 3cz8: Crystal structure of putative sporulation-specific glycosylase ydhD from Bacillus subtilis
Classification: HYDROLASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-04-28
Authors: Patskovsky, Y., Romero, R., Rutter, M., Chang, S., Maletic, M., Smith, D., Wasserman, S.R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3cz9: Crystal Structure of E18L DJ-1
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2008-04-28
Authors: Witt, A.C., Lakshminarasimhan, M., Remington, B.C., Hasim, S., Pozharski, E., Wilson, M.A.
PDB entry 3cza: Crystal Structure of E18D DJ-1
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-04-28
Authors: Witt, A.C., Lakshminarasimhan, M., Remington, B.C., Hashim, S., Pozharski, E., Wilson, M.A.
PDB entry 3czb: Crystal structure of putative transglycosylase from Caulobacter crescentus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Caulobacter crescentus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-04-28
Authors: Ramagopal, U.A., Chattopadhyay, K., Toro, R., Wasserman, S., Freeman, J., Logan, C., Bain, K., Gheyi, T., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3czc: The Crystal Structure of a putative PTS IIB(PtxB) from Streptococcus mutans
Classification: TRANSFERASE
Source organism: Streptococcus mutans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2008-04-29
Authors: Lei, J., Su, X.D.
PDB entry 3czd: Crystal structure of human glutaminase in complex with L-glutamate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-04-29
Authors: Karlberg, T., Welin, M., Andersson, J., Arrowsmith, C.H., Berglund, H., Busam, R.D., Collins, R., Dahlgren, L.G., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Kallas, A., Kotenyova, T., Lehtio, L., Moche, M., Nilsson, M.E., Nordlund, P., Nyman, T., Persson, C., Sagemark, J., Svensson, L., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Wikstrom, M., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3cze: Crystal Structure Analysis of Sucrose hydrolase (SUH)- Tris complex
Classification: HYDROLASE
Source organism: Xanthomonas axonopodis pv. glycines
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-04-29
Authors: Kim, M.I., Rhee, S.
PDB entry 3czf: Crystal structure of HLA-B*2709 complexed with the glucagon receptor (GR) peptide (residues 412-420)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-04-29
Authors: Loll, B., Fiorillo, M.T., Rueckert, C., Saenger, W., Sorrentino, R., Ziegler, A., Uchanska-Ziegler, B.
PDB entry 3czg: Crystal Structure Analysis of Sucrose hydrolase (SUH)-glucose complex
Classification: HYDROLASE
Source organism: Xanthomonas axonopodis pv. glycines
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-04-29
Authors: Kim, M.I., Rhee, S.
PDB entry 3czh: Crystal structure of CYP2R1 in complex with vitamin D2
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-04-29
Authors: Strushkevich, N.V., Tempel, W., Gilep, A.A., Loppnau, P., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Wilkstrom, M., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3czj: E. COLI (lacZ) BETA-GALACTOSIDASE (N460T) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-04-29
Authors: Huber, R.E., Dugdale, M.L., Fraser, M.E., Tammam, S.D.
PDB entry 3czk: Crystal Structure Analysis of Sucrose hydrolase(SUH) E322Q-sucrose complex
Classification: HYDROLASE
Source organism: Xanthomonas axonopodis pv. glycines
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-04-29
Authors: Kim, M.I., Rhee, S.
PDB entry 3czl: Crystal Structure Analysis of Sucrose hydrolase(SUH) E322Q-glucose complex
Classification: HYDROLASE
Source organism: Xanthomonas axonopodis pv. glycines
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-29
Authors: Kim, M.I., Rhee, S.
PDB entry 3czm: T. Gondii bradyzoite-specific LDH (LDH2) in complex with NAD and OXQ
Classification: OXIDOREDUCTASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-04-29
Authors: Wilson, D.K., Susko, M.S.
PDB entry 3czn: Golgi alpha-mannosidase II (D204A nucleophile mutant) in complex with GnMan5Gn
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-04-29
Authors: Shah, N., Rose, D.R.
PDB entry 3czo: Crystal Structure of Double Mutant Phenylalanine Ammonia-Lyase From Anabaena Variabilis
Classification: LYASE
Source organism: Anabaena variabilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-04-29
Authors: Stevens, R.C., Wang, L.
PDB entry 3czp: Crystal structure of putative polyphosphate kinase 2 from Pseudomonas aeruginosa PA01
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-29
Authors: Nocek, B., Evdokimova, E., Osipiuk, J., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3czq: Crystal structure of putative polyphosphate kinase 2 from Sinorhizobium meliloti
Classification: TRANSFERASE
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2008-04-29
Authors: Osipiuk, J., Evdokimova, E., Nocek, B., Kudritska, M., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3czr: Crystal Structure of Human 11-beta-Hydroxysteroid Dehydrogenase (HSD1) in Complex with Arylsulfonylpiperazine Inhibitor
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-04-29
Authors: Wang, Z., Sudom, A., Walker, N.P.
PDB entry 3czs: Golgi alpha-mannosidase II (D204A nucleophile mutant)
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-04-29
Authors: Shah, N., Rose, D.R.
PDB entry 3czt: Crystal Structure of S100B in the Calcium and Zinc Loaded State at pH 9
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-04-30
Authors: Ostendorp, T., Diez, J., Heizmann, C.W., Fritz, G.
PDB entry 3czu: Crystal structure of the human ephrin A2- ephrin A1 complex
Classification: TRANSFERASE/SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-04-30
Authors: Walker, J.R., Yermekbayeva, L., Seitova, A., Butler-Cole, C., Bountra, C., Wikstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 3czv: Crystal structure of the human carbonic anhydrase XIII in complex with acetazolamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-30
Authors: Di Fiore, A., De Simone, G.
PDB entry 3czw: X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-04-30
Authors: Rypniewski, W., Adamiak, D.A., Milecki, J., Adamiak, R.W.
PDB entry 3czx: The crystal structure of the putative N-acetylmuramoyl-L-alanine amidase from Neisseria meningitidis
Classification: HYDROLASE
Source organism: Neisseria meningitidis MC58
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-04-30
Authors: Zhang, R., Zhou, M., Bargassa, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3czy: Crystal Structure of Human Heme Oxygenase-1 in Complex with 1-(Adamantan-1-yl)-2-(1H-imidazol-1-yl)ethanone
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2008-04-30
Authors: Jia, Z., Rahman, M.N.
PDB entry 3czz: Crystal structure of Cyanovirin-N domain B mutant
Classification: ANTIVIRAL PROTEIN
Source organism: Nostoc ellipsosporum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2008-04-30
Authors: Matei, E., Furey, W., Gronenborn, A.M.
PDB entry 3d00: Crystal structure of a tungsten formylmethanofuran dehydrogenase subunit e (fmde)-like protein (syn_00638) from syntrophus aciditrophicus at 1.90 A resolution
Classification: METAL BINDING PROTEIN
Source organism: Syntrophus aciditrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-04-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3d01: Crystal structure of the protein Atu1372 with unknown function from Agrobacterium tumefaciens
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Agrobacterium tumefaciens str.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-04-30
Authors: Zhang, R., Xu, X., Gu, J., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d02: Crystal structure of periplasmic sugar-binding protein (YP_001338366.1) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.30 A resolution
Classification: SUGAR BINDING PROTEIN
Source organism: Klebsiella pneumoniae subsp. pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-04-30
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3d03: 1.9A structure of Glycerophoshphodiesterase (GpdQ) from Enterobacter aerogenes
Classification: HYDROLASE
Source organism: Enterobacter aerogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-04-30
Authors: Hadler, K.S., Tanifum, E., Yip, S.H.-C., Miti, N., Guddat, L.W., Jackson, C.J., Gahan, L.R., Carr, P.D., Nguyen, K., Ollis, D.L., Hengge, A.C., Larrabee, J.A., Schenk, G.
PDB entry 3d04: Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with sakuranetin
Classification: LYASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-05-01
Authors: Zhang, L., Kong, Y., Wu, D., Shen, X., Jiang, H.
PDB entry 3d05: Human p53 core domain with hot spot mutation R249S (II)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-01
Authors: Suad, O., Rozenberg, H., Shimon, L.J.W., Frolow, F., Shakked, Z.
PDB entry 3d06: Human p53 core domain with hot spot mutation R249S (I)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-05-01
Authors: Rozenberg, H., Suad, O., Shimon, L.J.W., Frolow, F., Shakked, Z.
PDB entry 3d07: Human p53 core domain with hot spot mutation R249S (III)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-01
Authors: Suad, O., Rozenberg, H., Shakked, Z.
PDB entry 3d08: Human p53 core domain with hot spot mutation R249S and second-site suppressor mutation H168R
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-05-01
Authors: Suad, O., Rozenberg, H., Shimon, L.J.W., Frolow, F., Shakked, Z.
PDB entry 3d09: Human p53 core domain with hot spot mutation R249S and second-site suppressor mutations H168R and T123A
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-01
Authors: Rozenberg, H., Suad, O., Shakked, Z.
PDB entry 3d0a: Human p53 core domain with hot spot mutation R249S and second site suppressor mutation H168R in sequence-specific complex with DNA
Classification: TRANSCRIPTION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-01
Authors: Suad, O., Rozenberg, H., Shakked, Z.
PDB entry 3d0b: Crystal Structure of Benzamide Tetrahydro-4H-carbazol-4-one bound to Hsp90
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2008-05-01
Authors: Barta, T.E., Veal, J.M., Huang, K.H., Hall, S.H.
PDB entry 3d0c: Crystal structure of dihydrodipicolinate synthase from Oceanobacillus iheyensis at 1.9 A resolution
Classification: LYASE
Source organism: Oceanobacillus iheyensis HTE831
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-01
Authors: Satyanarayana, L., Eswaramoorthy, S., Sauder, J.M., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3d0e: Crystal structure of human Akt2 in complex with GSK690693
Classification: TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-01
Authors: Concha, N.O., Smallwood, A.
PDB entry 3d0f: Structure of the BIG_1156.2 domain of putative penicillin-binding protein MrcA from Nitrosomonas europaea ATCC 19718
Classification: TRANSFERASE
Source organism: Nitrosomonas europaea ATCC 19718
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2008-05-01
Authors: Cuff, M.E., Mulligan, R., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d0g: Crystal structure of spike protein receptor-binding domain from the 2002-2003 SARS coronavirus human strain complexed with human-civet chimeric receptor ACE2
Classification: HYDROLASE
Source organism: Homo sapiens; Human SARS coronavirus; Paguma larvata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-05-01
Authors: Li, F.
PDB entry 3d0h: Crystal structure of spike protein receptor-binding domain from the 2002-2003 SARS coronavirus civet strain complexed with human-civet chimeric receptor ACE2
Classification: HYDROLASE
Source organism: Homo sapiens; Human SARS coronavirus; Paguma larvata
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-05-01
Authors: Li, F.
PDB entry 3d0i: Crystal structure of spike protein receptor-binding domain from the 2005-2006 SARS coronavirus civet strain complexed with human-civet chimeric receptor ACE2
Classification: HYDROLASE
Source organism: Homo sapiens; Human SARS coronavirus; Paguma larvata
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-05-01
Authors: Li, F.
PDB entry 3d0j: Crystal structure of conserved protein of unknown function CA_C3497 from Clostridium acetobutylicum ATCC 824
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Clostridium acetobutylicum ATCC 824
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2008-05-01
Authors: Kim, Y., Bigelow, L., Clancy, S., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d0k: Crystal structure of the LpqC, poly(3-hydroxybutyrate) depolymerase from Bordetella parapertussis
Classification: HYDROLASE
Source organism: Bordetella parapertussis 12822
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2008-05-01
Authors: Kim, Y., Tesar, C., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d0l: Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 FP-MPER Hyb3K construct 514GIGALFLGFLGAAGS528KK-Ahx-655KNEQELLELDKWASLWN671
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-05-01
Authors: Bryson, S., Julien, J.P., Pai, E.F.
PDB entry 3d0m: X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-02
Authors: Rypniewski, W., Adamiak, D.A., Milecki, J., Adamiak, R.W.
PDB entry 3d0n: Crystal structure of human carbonic anhydrase XIII
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-05-02
Authors: Di Fiore, A., De Simone, G.
PDB entry 3d0o: Crystal structure of Lactate Dehydrogenase from Staphylococcus Aureus
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-02
Authors: Ho, M., Gutierrez, J.A., Almo, S.C., Schramm, V.L.
PDB entry 3d0p: Insights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complex
Classification: hydrolase/DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-02
Authors: Pallan, P.S., Egli, M.
PDB entry 3d0q: Crystal structure of calG3 from Micromonospora echinospora determined in space group I222
Classification: TRANSFERASE
Source organism: Micromonospora echinospora
Experimental method: X-RAY DIFFRACTION
Resolution: 2.79 Å
Deposited: 2008-05-02
Authors: Bitto, E., Singh, S., Bingman, C.A., Wesenberg, G.E., Phillips Jr., G.N.
PDB entry 3d0r: Crystal structure of calG3 from Micromonospora echinospora determined in space group P2(1)
Classification: TRANSFERASE
Source organism: Micromonospora echinospora
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-02
Authors: Bitto, E., Bingman, C.A., Wesenberg, G.E., Phillips Jr., G.N.
PDB entry 3d0s: cAMP receptor protein from m.tuberculosis, cAMP-free form
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-02
Authors: Gallagher, D.T., Robinson, H., Reddy, P.T.
PDB entry 3d0t: Structure of the BNB domain of the Hsp70 cochaperone Bag2
Classification: CHAPERONE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-05-02
Authors: Xu, Z., Nix, J.C., Devlin, K., Misra, S.
PDB entry 3d0u: Crystal Structure of Lysine Riboswitch Bound to Lysine
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-05-02
Authors: Garst, A.D., Heroux, A., Rambo, R.P., Batey, R.T.
PDB entry 3d0v: Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide LLELDKWASLW
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2008-05-02
Authors: Bryson, S., Julien, J.P., Pai, E.F.
PDB entry 3d0w: Crystal structure of YflH protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR326
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-02
Authors: Seetharaman, J., Kuzin, A.P., Neely, H., Forouhar, F., Min, S., Zhao, L., Fang, Y., Owens, L., Ma, L.-C., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3d0x: Crystal Structure of the unbound lysine riboswitch
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2008-05-02
Authors: Batey, R.T., Garst, A.D., Heroux, A., Rambo, R.P.
PDB entry 3d0y: Crystal Structure of S100B in the Calcium and Zinc Loaded State at pH 6.5
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-05-02
Authors: Ostendorp, T., Diez, J., Heizmann, C.W., Fritz, G.
PDB entry 3d0z: Structural charcaterization of an engineered allosteric protein
Classification: TRANSFERASE
Source organism: Schistosoma japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-05-02
Authors: Sagermann, M.
PDB entry 3d10: Crystal Structure of S100B in the Calcium and Zinc Loaded State at pH 10.0
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-05-02
Authors: Ostendorp, T., Diez, J., Heizmann, C.W., Fritz, G.
PDB entry 3d11: Crystal Structures of the Nipah G Attachment Glycoprotein
Classification: HYDROLASE
Source organism: Nipah virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.306 Å
Deposited: 2008-05-02
Authors: Xu, K., Rajashankar, K.R., Chan, Y.P., Himanen, P., Broder, C.C., Nikolov, D.B.
PDB entry 3d12: Crystal Structures of Nipah Virus G Attachment Glycoprotein in Complex with its Receptor Ephrin-B3
Classification: HYDROLASE/MEMBRANE PROTEIN
Source organism: Mus musculus; Nipah virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.005 Å
Deposited: 2008-05-02
Authors: Xu, K., Rajashankar, K.R., Chan, Y.P., Himanen, P., Broder, C.C., Nikolov, D.B.
PDB entry 3d14: Crystal structure of mouse Aurora A (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with 1-{5-[2-(thieno[3,2-d]pyrimidin-4-ylamino)-ethyl]- thiazol-2-yl}-3-(3-trifluoromethyl-phenyl)-urea
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-04
Authors: Elling, R.A., Baskaran, S., Allen, D.A., Oslob, J.D., Romanowski, M.J.
PDB entry 3d15: Crystal structure of mouse Aurora A (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with 1-(3-chloro-phenyl)-3-{5-[2-(thieno[3,2-d]pyrimidin-4-ylamino)- ethyl]-thiazol-2-yl}-urea [SNS-314]
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-04
Authors: Elling, R.A., Bui, M., Allen, D.A., Oslob, J.D., Romanowski, M.J.
PDB entry 3d17: A triply ligated crystal structure of relaxed state human hemoglobin
Classification: OXYGEN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-05-05
Authors: Safo, M.K., Musayev, F.N., Jenkins, J., Abraham, D.J.
PDB entry 3d18: Crystal structure of HLA-B*2709 complexed with a variant of the latent membrane protein 2 peptide (LMP2(L)) of epstein-barr virus
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2008-05-05
Authors: Beltrami, A., Gabdulkhakov, A., Rossmann, M., Ziegler, A., Uchanska-Ziegler, B., Saenger, W.
PDB entry 3d19: Crystal structure of a conserved metalloprotein from Bacillus cereus
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-05
Authors: Bonanno, J.B., Patskovsky, Y., Freeman, J., Bain, K.T., Chang, S., Ozyurt, S., Smith, D., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3d1a: Crystal Structure Determination of Goat Hemoglobin at 2.61 Angstrom Resolution
Classification: Oxygen storage, Oxygen transport
Source organism: Capra hircus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2008-05-05
Authors: Sathya Moorthy, P., Neelagandan, K., Balasubramanian, M., Ponnuswamy, M.N.
PDB entry 3d1b: Tetragonal crystal structure of Tas3 C-terminal alpha motif
Classification: NUCLEAR PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-05
Authors: Li, H., Patel, D.J.
PDB entry 3d1c: Crystal structure of Flavin-containing Putative Monooxygenase (NP_373108.1) from STAPHYLOCOCCUS AUREUS MU50 at 2.40 A resolution
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-05-05
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3d1d: Hexagonal crystal structure of Tas3 C-terminal alpha motif
Classification: NUCLEAR PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-05-05
Authors: Li, H., Patel, D.J.
PDB entry 3d1e: Crystal structure of E. coli sliding clamp (beta) bound to a polymerase II peptide
Classification: TRANSFERASE, TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-05-05
Authors: Georgescu, R.E., Yurieva, O., Seung-Sup, K., Kuriyan, J., Kong, X.-P., O'Donnell, M.
PDB entry 3d1f: Crystal structure of E. coli sliding clamp (beta) bound to a polymerase III peptide
Classification: TRANSFERASE, TRANSCRIPTION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-05
Authors: Georgescu, R.E., Yurieva, O., Seung-Sup, K., Kuriyan, J., Kong, X.-P., O'Donnell, M.
PDB entry 3d1g: Structure of a small molecule inhibitor bound to a DNA sliding clamp
Classification: TRANSFERASE, TRANSCRIPTION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2008-05-05
Authors: Georgescu, R.E., Yurieva, O., Seung-Sup, K., Kuriyan, J., Kong, X.-P., O'Donnell, M.
PDB entry 3d1h: Structure of the PTP-Like Phytase Expressed by Selenomonas Ruminantium at an Ionic Strength of 500 mM
Classification: HYDROLASE
Source organism: Selenomonas ruminantium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-05
Authors: Gruninger, R.J., Selinger, L.B., Mosimann, S.C.
PDB entry 3d1i: Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with nitrite
Classification: OXIDOREDUCTASE
Source organism: Thioalkalivibrio nitratireducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-06
Authors: Polyakov, K.M., Boyko, K.M., Slutsky, A., Tikhonova, T.V., Antipov, A.N., Zvyagilskaya, R.A., Popov, A.N., Lamzin, V.S., Bourenkov, G.P., Popov, V.O.
PDB entry 3d1j: Crystal Structure of E.coli GS mutant dmGS(C7S;C408S)
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-05-06
Authors: Sheng, F., Geiger, J.H.
PDB entry 3d1k: R/T intermediate quaternary structure of an antarctic fish hemoglobin in an alpha(CO)-beta(pentacoordinate) state
Classification: OXYGEN BINDING
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2008-05-06
Authors: Vitagliano, L., Vergara, A., Bonomi, G., Merlino, A., Mazzarella, L.
PDB entry 3d1l: Crystal structure of putative NADP oxidoreductase BF3122 from Bacteroides fragilis
Classification: OXIDOREDUCTASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2008-05-06
Authors: Chang, C., Hendricks, R., Abdullah, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d1m: Crystal Structure of Sonic Hedgehog Bound to the third FNIII domain of CDO
Classification: signaling protein / cell adhesion
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-06
Authors: McLellan, J.S., Leahy, D.J.
PDB entry 3d1n: Structure of human Brn-5 transcription factor in complex with corticotrophin-releasing hormone gene promoter
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2008-05-06
Authors: Pereira, J.H., Ha, S.C., Kim, S.-H.
PDB entry 3d1o: Structure of the PTP-Like Phytase Expressed by Selenomonas Ruminantium at an Ionic Strength of 300 mM
Classification: HYDROLASE
Source organism: Selenomonas ruminantium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-06
Authors: Gruninger, R.J., Selinger, L.B., Mosimann, S.C.
PDB entry 3d1p: Atomic resolution structure of uncharacterized protein from Saccharomyces cerevisiae
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 0.98 Å
Deposited: 2008-05-06
Authors: Nocek, B., Evdokimova, E., Kudritska, M., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d1q: Structure of the PTP-Like Phytase Expressed by Selenomonas Ruminantium at an Ionic Strength of 400 mM
Classification: HYDROLASE
Source organism: Selenomonas ruminantium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-06
Authors: Gruninger, R.J., Selinger, L.B., Mosimann, S.C.
PDB entry 3d1r: Structure of E. coli GlpX with its substrate fructose 1,6-bisphosphate
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-05-06
Authors: Singer, A., Skarina, T., Dong, A., Brown, G., Joachimiak, A., Edwards, A.M., Yakunin, A.F., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3d1v: Crystal structure of human PNP complexed with 2-mercapto(3H) quinazolinone
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-05-06
Authors: De Azevedo Jr., W.F., Basso, L.A., Santos, D.S.
PDB entry 3d1x: Crystal structure of HIV-1 mutant I54M and inhibitor saquinavir
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2008-05-06
Authors: Liu, F., Weber, I.T.
PDB entry 3d1y: Crystal structure of HIV-1 mutant I54V and inhibitor SAQUINA
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2008-05-06
Authors: Liu, F., Weber, I.T.
PDB entry 3d1z: Crystal structure of HIV-1 mutant I54M and inhibitor DARUNAVIR
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-05-07
Authors: Liu, F., Kovalesky, A.Y., Tie, Y., Ghosh, A.K., Harrison, R.W., Weber, I.T.
PDB entry 3d20: Crystal structure of HIV-1 mutant I54V and inhibitor DARUNAVIA
Classification: HYDROLASE
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2008-05-07
Authors: Liu, F., Kovalesky, A.Y., Tie, Y., Ghosh, A.K., Harrison, R.W., Weber, I.T.
PDB entry 3d21: Crystal structure of a poplar wild-type thioredoxin h, PtTrxh4
Classification: OXIDOREDUCTASE
Source organism: Populus trichocarpa x Populus deltoides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-05-07
Authors: Koh, C.S., Didierjean, C., Corbier, C., Rouhier, N., Jacquot, J.P., Gelhaye, E.
PDB entry 3d22: Crystal structure of a poplar thioredoxin h mutant, PtTrxh4C61S
Classification: OXIDOREDUCTASE
Source organism: Populus trichocarpa x Populus deltoides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-07
Authors: Koh, C.S., Didierjean, C., Corbier, C., Rouhier, N., Jacquot, J.P., Gelhaye, E.
PDB entry 3d23: Main protease of HCoV-HKU1
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human coronavirus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-05-07
Authors: Zhao, Q., Chen, C., Li, S., Zou, Y.
PDB entry 3d24: Crystal structure of ligand-binding domain of estrogen-related receptor alpha (ERRalpha) in complex with the peroxisome proliferators-activated receptor coactivator-1alpha box3 peptide (PGC-1alpha)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2008-05-07
Authors: Moras, D., Greschik, H., Flaig, R., Sato, Y., Rochel, N., Structural Proteomics in Europe (SPINE)
PDB entry 3d25: Crystal structure of HA-1 minor histocompatibility antigen bound to human class I MHC HLA-A2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-05-07
Authors: Nicholls, S., Piper, K.P., Mohammed, F., Dafforn, T.R., Tenzer, S., Salim, M., Mahendra, P., Craddock, C., van Endert, P., Schild, H., Cobbold, M., Engelhard, V.H., Moss, P.A.H., Willcox, B.E.