LiteFold/PDB huggingface dataset:
PDB entry 7joc: Carbonic Anhydrase IX Mimic Complexed with N-(5-sulfamoyl-1,3,4-thiadiazol-2-yl)adamantanecarboxamide
Classification: LYASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.385 Å
Deposited: 2020-08-06
Authors: Andring, J.T., McKenna, R.
PDB entry 7jod: Crystal structure of BbKI complexed with Human Kallikrein 4
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bauhinia bauhinioides; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2020-08-06
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7joe: Crystal structure of BbKI complexed with Human Kallikrein 4
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bauhinia bauhinioides; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-08-06
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7jof: Calcium-bound C2A Domain from Human Dysferlin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-08-06
Authors: Tadayon, R., Wang, Y., Santamaria, L., Mercier, P., Forristal, C., Shaw, G.S.
PDB entry 7jog: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J33 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.101 Å
Deposited: 2020-08-06
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7joh: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J31 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.195 Å
Deposited: 2020-08-06
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7joi: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J30 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.148 Å
Deposited: 2020-08-06
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7joj: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J28 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.108 Å
Deposited: 2020-08-06
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jok: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J26 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2020-08-06
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jol: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J24 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.114 Å
Deposited: 2020-08-06
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jom: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with TO-317
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-08-06
Authors: Watson, P.R., Christianson, D.W.
PDB entry 7jon: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J23 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.107 Å
Deposited: 2020-08-06
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7joo: Crystal structure of ICOS in complex with antibody STIM003 and anti-kappa VHH domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-08-06
Authors: Rujas, E., Sicard, T., Julien, J.P.
PDB entry 7joq: Structure of NV1 small terminase
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage NV1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.95 Å
Deposited: 2020-08-07
Authors: Cingolani, G., Lokareddy, R.
PDB entry 7jor: Neutron structure of ferric Dehaloperoxidase B
Classification: OXIDOREDUCTASE
Source organism: Amphitrite ornata
Experimental method: NEUTRON DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-08-07
Authors: Carey, L.M., Ghiladi, R.A., Meilleur, F., Myles, D.A.A.
PDB entry 7jos: Crystal structure of BbKI complexed with Human Kallikrein 4
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bauhinia bauhinioides; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-08-07
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7jot: Adeno-associated virus strain AAV7 capsid icosahedral structure
Classification: VIRUS
Source organism: Adeno-associated virus - 7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-08-07
Authors: Firlar, E., Yost, S.A., Mercer, A.C., Kaelber, J.T.
PDB entry 7jou: CRYSTAL STRUCTURE OF RHO-ASSOCIATED PROTEIN KINASE 1 (ROCK1) IN COMPLEX WITH A PHENYLPYRAZOLE AMIDE INHIBITOR
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.318 Å
Deposited: 2020-08-07
Authors: Muckelbauer, J.K.
PDB entry 7jov: CRYSTAL STRUCTURE OF RHO-ASSOCIATED PROTEIN KINASE 2 (ROCK2) IN COMPLEX WITH A PHENYLPYRAZOLE AMIDE INHIBITOR
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.586 Å
Deposited: 2020-08-07
Authors: Muckelbauer, J.K.
PDB entry 7jow: Crystal structure of BbKI complexed with Human Kallikrein 4
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bauhinia bauhinioides; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2020-08-07
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7joy: Product structure of SARS-CoV-2 Mpro C145A mutant in complex with its C-terminal autoprocessing sequence.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-08-07
Authors: Lee, J., Worrall, L.J., Paetzel, M., Strynadka, N.C.J.
PDB entry 7joz: Crystal structure of dopamine D1 receptor in complex with G protein and a non-catechol agonist
Classification: MEMBRANE PROTEIN
Source organism: Enterobacteria phage T4; Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2020-08-07
Authors: Sun, B., Feng, D., Chu, M.L., Fish, I., Kelm, S., Lebon, F., Lovera, S., Valade, A., Wood, M., Ceska, T., Kobilka, T.S., Sands, Z., Kobilka, B.K.
PDB entry 7jp0: Crystal structure of Mpro with inhibitor r1
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-08-07
Authors: Yang, K., Liu, W.
PDB entry 7jp1: Structure of wild-type substrate free SARS-CoV-2 Mpro.
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-08-07
Authors: Lee, J., Worrall, L.J., Paetzel, M., Strynadka, N.C.J.
PDB entry 7jp2: Crystal structure of TP0037 from Treponema pallidum, a D-lactate dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Treponema pallidum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2020-08-07
Authors: Brautigam, C.A., Deka, R.K., Norgard, M.V.
PDB entry 7jp3: Des-B29,B30-insulin
Classification: HORMONE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2020-08-07
Authors: Yoder, J., Weiss, M.A., DiMarchi, R., Zaykov, A.
PDB entry 7jp4: Crystal structure of a refolded head domain hemagglutinin HA from Influenza A virus A/Fort Monmouth/1/1947
Classification: VIRAL PROTEIN
Source organism: Influenza A virus (A/Fort Monmouth/1/1947(H1N1))
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-08-07
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7jp5: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J22 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.094 Å
Deposited: 2020-08-07
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jp6: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J20 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.087 Å
Deposited: 2020-08-07
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jp7: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J16 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.207 Å
Deposited: 2020-08-07
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jp8: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J10 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.103 Å
Deposited: 2020-08-07
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jp9: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J8 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.157 Å
Deposited: 2020-08-07
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jpa: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J5 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.164 Å
Deposited: 2020-08-07
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jpb: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J2 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.158 Å
Deposited: 2020-08-07
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jpc: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J7 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2020-08-07
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jpd: Crystal structure of the trimeric full length mature hemagglutinin from influenza A virus A/Fort Monmouth/1/1947
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2020-08-07
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7jpe: Room Temperature Structure of SARS-CoV-2 Nsp10/Nsp16 Methyltransferase in a Complex with m7GpppA Cap-0 and SAM Determined by Fixed-Target Serial Crystallography
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2020-08-07
Authors: Wilamowski, M., Sherrell, D.A., Minasov, G., Kim, Y., Shuvalova, L., Lavens, A., Chard, R., Rosas-Lemus, M., Maltseva, N., Jedrzejczak, R., Michalska, K., Satchell, K.J.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7jph: Crystal structure of EBOV glycoprotein with modified HR1c and HR2 stalk at 3.2 A resolution
Classification: VIRAL PROTEIN
Source organism: Ebola virus - Mayinga, Zaire, 1976
Experimental method: X-RAY DIFFRACTION
Resolution: 3.195 Å
Deposited: 2020-08-08
Authors: Chaudhary, A., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 7jpi: Crystal structure of EBOV glycoprotein with modified HR2 stalk at 2.3A resolution
Classification: VIRAL PROTEIN
Source organism: Ebola virus - Mayinga, Zaire, 1976
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2020-08-08
Authors: Chaudhary, A., Stanfield, R.L., Wilson, I.A., Zhu, J.
PDB entry 7jpj: Crystal Structure of the essential dimeric LYSA from Phaeodactylum tricornutum
Classification: LYASE
Source organism: Phaeodactylum tricornutum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.78 Å
Deposited: 2020-08-08
Authors: Fedorov, E., Belinski, V.A., Brunson, J.K., Almo, S.C., Dupont, C.L., Ghosh, A.
PDB entry 7jpk: Rabbit Cav1.1 in the presence of 100 micromolar (S)-(-)-Bay K8644 in nanodiscs at 3.0 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2020-08-09
Authors: Yan, N., Gao, S.
PDB entry 7jpl: Rabbit Cav1.1 in the presence of 10 micromolar (S)-(-)-Bay K8644 in nanodiscs at 3.4 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-08-09
Authors: Yan, N., Gao, S.
PDB entry 7jpm: The solution structure of omega-theraphotoxin-Pm1b isolated from King Baboon spider
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2020-08-09
Authors: Chin, Y.K.-Y., Ziegman, R., Alewood, P.F.
PDB entry 7jpn: Cryo-EM structure of Arpin-bound Arp2/3 complex
Classification: CONTRACTILE PROTEIN
Source organism: Bos taurus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2020-08-09
Authors: van Eeuwen, T., Fregoso, F.E., Dominguez, R., Zimmet, A., Boczkowska, M., Rebowski, G.
PDB entry 7jpo: ORC-O1AAA: Human Origin Recognition Complex (ORC) with dynamic/unresolved ORC2 WH
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-08-09
Authors: Jaremko, M.J., Joshua-Tor, L.
PDB entry 7jpp: ORC-O2WH: Human Origin Recognition Complex (ORC) with dynamic/unresolved ORC1 AAA+ domain
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-08-09
Authors: Jaremko, M.J., Joshua-Tor, L.
PDB entry 7jpq: ORC-O2-5: Human Origin Recognition Complex (ORC) with subunits 2,3,4,5
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-08-09
Authors: Jaremko, M.J., Joshua-Tor, L.
PDB entry 7jpr: ORC-OPEN: Human Origin Recognition Complex (ORC) in an open conformation
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-08-09
Authors: Jaremko, M.J., Joshua-Tor, L.
PDB entry 7jps: ORC-DNA: Human Origin Recognition Complex (ORC) with DNA bound in the core
Classification: replication/DNA
Source organism: Homo sapiens; Spodoptera frugiperda
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2020-08-09
Authors: Jaremko, M.J., Joshua-Tor, L.
PDB entry 7jpt: Structure of an endocytic receptor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-08-09
Authors: Gully, B.S., Rossjohn, J., Berry, R.
PDB entry 7jpu: Structure of an endocytic receptor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2020-08-09
Authors: Gully, B.S., Rossjohn, J., Berry, R.
PDB entry 7jpv: Rabbit Cav1.1 in the presence of 1 micromolar (S)-(-)-Bay K8644 in nanodiscs at 3.4 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2020-08-10
Authors: Yan, N., Gao, S.
PDB entry 7jpw: Rabbit Cav1.1 in the presence of 100 micromolar (R)-(+)-Bay K8644 in nanodiscs at 3.2 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-08-10
Authors: Yan, N., Gao, S.
PDB entry 7jpx: Rabbit Cav1.1 in the presence of 100 micromolar amlodipine in nanodiscs at 2.9 Angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-08-10
Authors: Yan, N., Gao, S.
PDB entry 7jpy: Crystal structure of the SARS-CoV-2 main protease in its apo-form
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-08-10
Authors: Yang, K., Liu, W.
PDB entry 7jpz: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI1
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-08-10
Authors: Yang, K., Liu, W.
PDB entry 7jq0: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI3
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-08-10
Authors: Yang, K., Liu, W.
PDB entry 7jq1: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI4
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-08-10
Authors: Yang, K., Liu, W.
PDB entry 7jq2: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI5
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2020-08-10
Authors: Yang, K., Liu, W.
PDB entry 7jq3: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI6
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-08-10
Authors: Yang, K., Liu, W.
PDB entry 7jq4: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI7
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-08-10
Authors: Yang, K., Liu, W.
PDB entry 7jq5: Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI8
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-08-10
Authors: Yang, K., Liu, W.
PDB entry 7jq6: The Phi-28 gp11 DNA packaging Motor
Classification: VIRAL PROTEIN
Source organism: Lactococcus phage asccphi28
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-08-10
Authors: Morais, M.C., White, M.A., Dill, E.
PDB entry 7jq7: The Phi-28 gp11 DNA packaging Motor
Classification: VIRAL PROTEIN
Source organism: Lactococcus phage asccphi28
Experimental method: X-RAY DIFFRACTION
Resolution: 2.895 Å
Deposited: 2020-08-10
Authors: Morais, M.C., White, M.A., Dill, E.
PDB entry 7jq8: Solution NMR structure of human Brd3 ET domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Moloney murine leukemia virus (isolate Shinnick)
Experimental method: SOLUTION NMR
Deposited: 2020-08-10
Authors: Aiyer, S., Swapna, G.V.T., Roth, J.M., Montelione, G.T.
PDB entry 7jq9: Cryo-EM structure of human HUWE1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2020-08-10
Authors: Hunkeler, M., Fischer, E.S.
PDB entry 7jqa: EQADH-NADH-4-BROMOBENZYL ALCOHOL, P21
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2020-08-10
Authors: Plapp, B.V., Ramaswamy, S.
PDB entry 7jqb: SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex
Classification: RIBOSOME/VIRAL PROTEIN
Source organism: Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2020-08-10
Authors: Yuan, S., Xiong, Y.
PDB entry 7jqc: SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex
Classification: RIBOSOME/VIRAL PROTEIN
Source organism: Cricket paralysis virus; Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-08-10
Authors: Yuan, S., Xiong, Y.
PDB entry 7jqd: Crystal Structure of PAC1r in complex with peptide antagonist
Classification: SIGNALING PROTEIN/ANTAGONIST
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-08-10
Authors: Piper, D.E., Hu, E., Fang-Tsao, H.
PDB entry 7jqe: Structure of an extracellular fragment of EsaA from Streptococcus gallolyticus
Classification: PROTEIN TRANSPORT
Source organism: Streptococcus gallolyticus (strain ATCC 43143 / F-1867)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-08-10
Authors: Klein, T.A., Grebenc, D.W., Kim, Y., Whitney, J.C.
PDB entry 7jqg: Crystal structure of human PPARgamma ligand binding domain Y473E mutant in complex with GW1929
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-08-10
Authors: Shang, J., Kojetin, D.J.
PDB entry 7jqh: Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with phosphate and NADP+
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-08-11
Authors: Vuksanovic, N., Silvaggi, N.R.
PDB entry 7jqi: Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with alpha-ketoglutarate and NADP+
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-08-11
Authors: Vuksanovic, N., Silvaggi, N.R.
PDB entry 7jqj: Structure of W45F Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with NADP+
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-08-11
Authors: Vuksanovic, N., Silvaggi, N.R.
PDB entry 7jqk: Crystal structure of the R64A mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Human Kallikrein 4
Classification: STRUCTURAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Bauhinia bauhinioides; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2020-08-11
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7jql: Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2020-08-11
Authors: Mardirossian, M., Sola, R., Beckert, B., Valencic, E., Collis, D.W.P., Borisek, J., Armas, F., Di Stasi, A., Buchmann, J., Syroegin, E.A., Polikanov, Y.S., Magistrato, A., Hilpert, K., Wilson, D.N., Scocchi, M.
PDB entry 7jqm: Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2020-08-11
Authors: Mardirossian, M., Sola, R., Beckert, B., Valencic, E., Collis, D.W.P., Borisek, J., Armas, F., Di Stasi, A., Buchmann, J., Syroegin, E.A., Polikanov, Y.S., Magistrato, A., Hilpert, K., Wilson, D.N., Scocchi, M.
PDB entry 7jqn: Crystal structure of the R64M mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Human Kallikrein 4
Classification: STRUCTURAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Bauhinia bauhinioides; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-08-11
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7jqo: Crystal structure of the R64D mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Human Kallikrein 4
Classification: STRUCTURAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Bauhinia bauhinioides; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-08-11
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7jqp: The Phi-28 gp11 DNA packaging Motor
Classification: VIRAL PROTEIN
Source organism: Lactococcus phage asccphi28
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2020-08-11
Authors: Morais, M.C., White, M.A., Dill, E.
PDB entry 7jqq: The bacteriophage Phi-29 viral genome packaging motor assembly
Classification: MOTOR PROTEIN
Source organism: Bacillus phage phi29; Bacillus virus phi29
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2020-08-11
Authors: White, M.A., Woodson, M., Morais, M.C.
PDB entry 7jqr: Abeta 16-36 beta-hairpin mimic with E22G Arctic mutation
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2020-08-11
Authors: Kreutzer, A.G., McKnelly, K.J., Nowick, J.S.
PDB entry 7jqs: Abeta 16-36 beta-hairpin mimic with E22delta Osaka mutation
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.127 Å
Deposited: 2020-08-11
Authors: Kreutzer, A.G., McKnelly, K.J., Nowick, J.S.
PDB entry 7jqt: Abeta 16-36 beta-hairpin mimic with E22K Italian mutation
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2020-08-11
Authors: Kreutzer, A.G., McKnelly, K.J., Nowick, J.S.
PDB entry 7jqu: Abeta 16-36 beta-hairpin mimic with E22G Arctic mutation
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.611 Å
Deposited: 2020-08-11
Authors: Kreutzer, A.G., McKnelly, K.J., Nowick, J.S.
PDB entry 7jqv: Crystal structure of the R64F mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Human Kallikrein 4
Classification: HYDROLASE/INHIBITOR
Source organism: Bauhinia bauhinioides; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-08-11
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7jqw: The external aldimine crystal structure of Salmonella typhimurium Tryptophan Synthase mutant beta-S377A in complex with cesium ion at the metal coordination site. The single beta-Q114 rotamer conformation allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring
Classification: LYASE/LYASE INHIBITOR
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-08-11
Authors: Hilario, E., Dunn, M.F., Mueller, L.J.
PDB entry 7jqx: Crystal structure of Cfl1 wild-type from Burkholderia cenocepacia
Classification: HYDROLASE
Source organism: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-08-11
Authors: Taher, N.M., Madden, D.R.
PDB entry 7jqy: Crystal structure of Cfl1-D123S from Burkholderia cenocepacia
Classification: HYDROLASE
Source organism: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2020-08-11
Authors: Taher, N.M., Madden, D.R.
PDB entry 7jqz: Crystal structure of Cfl2 wild-type from Burkholderia cenocepacia
Classification: HYDROLASE
Source organism: Burkholderia cenocepacia (strain MC0-3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-08-11
Authors: Taher, N.M., Madden, D.R.
PDB entry 7jr1: Crystal structure of the R64F mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Bovine Trypsin
Classification: HYDROLASE/INHIBITOR
Source organism: Bauhinia bauhinioides; Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-08-11
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7jr2: Crystal structure of the R64M mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Bovine Trypsin
Classification: HYDROLASE/INHIBITOR
Source organism: Bauhinia bauhinioides; Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.851 Å
Deposited: 2020-08-11
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7jr3: SARS-CoV-2 3CL protease crystallized under reducing conditions
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-08-11
Authors: de Oliveira, R.R., Nascimento, A.F.Z., Zeri, A.C.M., Trivella, D.B.B.
PDB entry 7jr4: SARS-CoV-2 3CL protease with alternative conformation of the active site promoted by methylene-bridged cysteine and lysine residues
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-08-11
Authors: Nascimento, A.F.Z., de Oliveira, R.R., Zeri, A.C.M., Trivella, D.B.B.
PDB entry 7jr5: Real Time Reaction Intermediates in Stigmatella Bacteriophytochrome P2
Classification: SIGNALING PROTEIN
Source organism: Stigmatella aurantiaca (strain DW4/3-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-08-11
Authors: Schmidt, M.
PDB entry 7jr6: H-PDGS complexed with a 2-phenylimidazo[1,2-a]pyridine-6-carboxamide inhibitors
Classification: Isomerase, Transferase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2020-08-11
Authors: Nolte, R.T., Somers, D.O., Gampe, R.T.
PDB entry 7jr7: Cryo-EM structure of ABCG5/G8 in complex with Fab 2E10 and 11F4
Classification: TRANSLOCASE/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-08-11
Authors: Huang, C.S., Yu, X., Min, X., Wang, Z., Zhang, H.
PDB entry 7jr8: H-PDGS complexed with a 2-phenylimidazo[1,2-a]pyridine-6-carboxamide inhibitors
Classification: Isomerase, Transferase/Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2020-08-11
Authors: Nolte, R.T., Somers, D.O., Gampe, R.T.
PDB entry 7jr9: Chlamydomonas reinhardtii radial spoke minimal head complex
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2020-08-11
Authors: Grossman-Haham, I., Coudray, N., Yu, Z., Wang, F., Bhabha, G., Vale, R.D.
PDB entry 7jra: HUMAN TNF-ALPHA IN COMPLEX WITH 2-[5-(3-chloro-4-{[(1R)-1-(2-fluorophenyl)ethyl]amino}quinolin-6-yl)pyrimidin-2-yl]propan-2-ol
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-08-11
Authors: Sheriff, S.
PDB entry 7jrb: Phospholipase D engineered mutant
Classification: HYDROLASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.493 Å
Deposited: 2020-08-12
Authors: Vrielink, A., Samantha, A.
PDB entry 7jrc: Phospholipase D engineered mutant in complex with phosphate
Classification: HYDROLASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2020-08-12
Authors: Vrielink, A., Samantha, A.
PDB entry 7jrd: The crystal structure of lactoferrin binding protein B (LbpB) from Neisseria meningitidis in complex with human lactoferrin
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Neisseria meningitidis serogroup B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2020-08-12
Authors: Yadav, R., Noinaj, N.
PDB entry 7jre: Crystal structure of EV-D68 2A protease C107A mutant
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Human enterovirus D68
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-08-12
Authors: Liu, C., Lee, M.-Y., Liu, W., Wang, J.
PDB entry 7jrf: CO-CO-BOUND NITROGENASE MOFE-PROTEIN FROM A. VINELANDII
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2020-08-12
Authors: Spatzal, T., Perez, K.A., Buscagan, T.M., Maggiolo, A.O., Rees, D.C.
PDB entry 7jrg: Plant Mitochondrial complex III2 from Vigna radiata
Classification: ELECTRON TRANSPORT
Source organism: Vigna radiata; Vigna radiata var. radiata
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-08-12
Authors: Maldonado, M., Letts, J.A.
PDB entry 7jrh: X-ray crystal structure of a cyclic peptide containing medin(19-25) and medin(31-37)
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2020-08-12
Authors: Wierzbicki, M., Howitz, W.J., Nowick, J.S.
PDB entry 7jri: High-resolution Crystal Structures of Transient Intermediates in the Phytochrome Photocycle, 33 ms structure
Classification: SIGNALING PROTEIN
Source organism: Stigmatella aurantiaca
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-08-12
Authors: Schmidt, M., Stojkovic, E.
PDB entry 7jrj: Chlamydomonas reinhardtii radial spoke head and neck (recombinant)
Classification: STRUCTURAL PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2020-08-12
Authors: Grossman-Haham, I., Coudray, N., Yu, Z., Wang, F., Zhang, N., Bhabha, G., Vale, R.D.
PDB entry 7jrk: The Structure of BamE from Pseudomonas aeruginosa
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2020-08-12
Authors: Bi, M., Noinaj, N.
PDB entry 7jrl: The structure of CBM51-2 in complex with GlcNAc and INT domains from Clostridium perfringens ZmpB
Classification: SUGAR BINDING PROTEIN
Source organism: Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-08-12
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 7jrm: The structure of CBM51-2 and INT domains from Clostridium perfringens ZmpB
Classification: SUGAR BINDING PROTEIN
Source organism: Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-08-12
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 7jrn: Crystal structure of the wild type SARS-CoV-2 papain-like protease (PLPro) with inhibitor GRL0617
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2020-08-12
Authors: Sacco, M., Ma, C., Wang, J., Chen, Y.
PDB entry 7jro: Plant Mitochondrial complex IV from Vigna radiata
Classification: OXIDOREDUCTASE
Source organism: Vigna radiata; Vigna radiata var. radiata
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-08-12
Authors: Maldonado, M., Letts, J.A.
PDB entry 7jrp: Plant Mitochondrial complex SC III2+IV from Vigna radiata
Classification: OXIDOREDUCTASE
Source organism: Vigna radiata; Vigna radiata var. radiata
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-08-12
Authors: Maldonado, M., Letts, J.A.
PDB entry 7jrq: Crystallographically Characterized De Novo Designed Mn-Diphenylporphyrin Binding Protein
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2020-08-12
Authors: Mann, S.I., DeGrado, W.F.
PDB entry 7jrr: Crystal structures of artificially designed homomeric RNA nanoarchitectures
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2020-08-12
Authors: Liu, D., Shao, Y., Piccirilli, J.A., Weizmann, Y.
PDB entry 7jrs: Crystal structures of artificially designed homomeric RNA nanoarchitectures
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2020-08-12
Authors: Liu, D., Shao, Y., Piccirilli, J.A., Weizmann, Y.
PDB entry 7jrt: Crystal structures of artificially designed homomeric RNA nanoarchitectures
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.07 Å
Deposited: 2020-08-12
Authors: Liu, D., Shao, Y., Piccirilli, J.A., Weizmann, Y.
PDB entry 7jru: Phospholipase D engineered mutant bound to phosphatidic acid (8 hour soak)
Classification: HYDROLASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2020-08-13
Authors: Vrielink, A., Samantha, A.
PDB entry 7jrv: Phospholipase D engineered mutant bound to phosphatidic acid (30 minute soak)
Classification: HYDROLASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2020-08-13
Authors: Vrielink, A., Samantha, A.
PDB entry 7jrw: Phospholipase D engineered mutant bound to phosphatidic acid (5 day soak)
Classification: HYDROLASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2020-08-13
Authors: Vrielink, A., Samantha, A.
PDB entry 7jrx: Crystal structure of the R64F mutant of Bauhinia Bauhinioides complexed with Bovine Chymotrypsin
Classification: HYDROLASE/INHIBITOR
Source organism: Bauhinia bauhinioides; Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-08-13
Authors: Li, M., Wlodawer, A., Gustchina, A.
PDB entry 7jry: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J4 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.158 Å
Deposited: 2020-08-13
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jrz: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J5 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.096 Å
Deposited: 2020-08-13
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7js0: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J31 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.19 Å
Deposited: 2020-08-13
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7js1: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J33 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.152 Å
Deposited: 2020-08-13
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7js2: Self-assembly of a 3D DNA crystal lattice (4x6 duplex version) containing the J36 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.058 Å
Deposited: 2020-08-13
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7js3: Structure of the Class II Fructose-1,6-Bisphophatase from Francisella tularensis
Classification: HYDROLASE
Source organism: Francisella tularensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-08-13
Authors: Abad-Zapatero, C., Wolf, N.M., Movahedzadeh, F., Gutka, H., Selezneva, A.
PDB entry 7js4: The structure of the M60 catalytic domain with the CBM51-1 and CBM51-2 domains from Clostridium perfringens ZmpB
Classification: HYDROLASE
Source organism: Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.6 Å
Deposited: 2020-08-13
Authors: Pluvinage, B., Boraston, A.B.
PDB entry 7js5: Phospholipase D engineered mutant (TNYR) inactive enzyme (H168A) bound to 1-inositol phosphate
Classification: LIPID BINDING PROTEIN
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-08-13
Authors: Vrielink, A., Samantha, A.
PDB entry 7js6: Solution NMR structure of des-citrulassin F
Classification: UNKNOWN FUNCTION
Source organism: Streptomyces avermitilis
Experimental method: SOLUTION NMR
Deposited: 2020-08-13
Authors: Harris, L.A., Mitchell, D.A.
PDB entry 7js7: Phospholipase D engineered mutant (TNYR) H442 covalent adduct with 1-inositol phosphate
Classification: HYDROLASE
Source organism: Streptomyces antibioticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2020-08-13
Authors: Vrielink, A., Samantha, A.
PDB entry 7js8: STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN ETHYL KETONE INHIBITOR CONTAINING A SPIRO-BICYCLIC GROUP (COMPOUND 22)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.634 Å
Deposited: 2020-08-14
Authors: Klein, D.J., Yu, W.
PDB entry 7jsa: Crystal structure of the DNA binding domain of human transcription factor ERF in the reduced form, in complex with double-stranded DNA ACCGGAAGTG
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2020-08-14
Authors: Hou, C., Tsodikov, O.V.
PDB entry 7jsb: Self-assembly of a 3D DNA crystal lattice (4x6 scramble duplex version) containing the J30 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.103 Å
Deposited: 2020-08-14
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jsc: Self-assembly of a 3D DNA crystal lattice (4x6 scramble duplex version) containing the J31 immobile Holliday junction with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2020-08-14
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 7jsd: Hydroxylase homolog of BesD with Fe(II), alpha-ketoglutarate, and lysine
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces roseifaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-08-14
Authors: Kissman, E.N., Neugebauer, M.E., Chang, M.C.Y.
PDB entry 7jse: Adeno-Associated Virus Origin Binding Domain in complex with ssDNA
Classification: VIRAL PROTEIN/DNA
Source organism: Adeno-associated virus - 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2020-08-14
Authors: Escalante, C.R.
PDB entry 7jsf: Adeno-Associated Virus Helicase domain Heptamer with ssDNA
Classification: VIRAL PROTEIN
Source organism: Adeno-associated virus - 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.7 Å
Deposited: 2020-08-14
Authors: Escalante, C.R.
PDB entry 7jsg: Adeno-Associated Virus 2 Rep68 HD-Heptamer-ssDNA with ATPgS
Classification: VIRAL PROTEIN/DNA
Source organism: Adeno-associated virus - 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2020-08-14
Authors: Escalante, C.R.
PDB entry 7jsh: Adeno-Associated Virus 2 Rep68 HD Heptamer-ssAAVS1 with ATPgS
Classification: VIRAL PROTEIN/DNA
Source organism: Adeno-associated virus - 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2020-08-14
Authors: Escalante, C.R.
PDB entry 7jsi: Adeno-Associated Virus 2 Rep68 HD Hexamer-ssDNA with ATPgS
Classification: VIRAL PROTEIN
Source organism: Adeno-associated virus - 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.01 Å
Deposited: 2020-08-14
Authors: Escalante, C.R.
PDB entry 7jsj: Structure of the NaCT-PF2 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2020-08-14
Authors: Sauer, D.B., Wang, B., Song, J., Rice, W.J., Wang, D.N.
PDB entry 7jsk: Structure of the NaCT-Citrate complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2020-08-14
Authors: Sauer, D.B., Wang, B., Song, J., Rice, W.J., Wang, D.N.
PDB entry 7jsl: Crystal structure of the DNA binding domain of human transcription factor ERF in the oxidized form, in complex with double-stranded DNA ACCGGAAGTG
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 4.51 Å
Deposited: 2020-08-14
Authors: Hou, C., Tsodikov, O.V.
PDB entry 7jsm: CRYSTAL STRUCTURE OF NATIVE BOVINE ARRESTIN 1
Classification: PROTEIN BINDING
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-08-14
Authors: Sander, C.L., Palczewski, K., Kiser, P.D.
PDB entry 7jsn: Structure of the Visual Signaling Complex between Transducin and Phosphodiesterase 6
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-08-15
Authors: Gao, Y., Eskici, G., Ramachandran, S., Skiniotis, G., Cerione, R.A.
PDB entry 7jso: P. syringae AldA Indole-3-Acetaldehyde Dehydrogenase C302A mutant in complex with NAD+ and IAA
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.848 Å
Deposited: 2020-08-15
Authors: Jez, J.M.
PDB entry 7jsp: Crystal structure of the second bromodomain (BD2) of human TAF1 bound to ATR kinase inhibitor AZD6738
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-08-15
Authors: Karim, M.R., Schonbrunn, E.
PDB entry 7jsq: Refined structure of the C-terminal domain of DNAJB6b
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2020-08-15
Authors: Karamanos, T.K., Clore, G.M.
PDB entry 7jsr: Crystal structure of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 6.27 Å
Deposited: 2020-08-15
Authors: Lazaro, M., Melero, R., Huet, C., Lopez-Alonso, J.P., Delgado, S., Dodu, A., Bruch, E.M., Abriata, L.A., Alzari, P.M., Valle, M., Lisa, M.N.
PDB entry 7jss: ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
Classification: Ribosome/TRANSLATION
Source organism: Escherichia coli; Escherichia coli (strain K12); Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-08-15
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7jst: Crystal structure of SARS-CoV-2 3CL in apo form
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-08-16
Authors: Iketani, S., Forouhar, F., Liu, H., Hong, S.J., Lin, F.-Y., Nair, M.S., Zask, A., Huang, Y., Xing, L., Stockwell, B.R., Chavez, A., Ho, D.D.
PDB entry 7jsu: Crystal structure of SARS-CoV-2 3CL protease in complex with GC376
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2020-08-16
Authors: Iketani, S., Forouhar, F., Liu, H., Hong, S.J., Lin, F.-Y., Nair, M.S., Zask, A., Xing, L., Stockwell, B.R., Chavez, A., Ho, D.D.
PDB entry 7jsv: Cryo-EM structure of conjugative pili from carbapenem-resistant Klebsiella pneumoniae
Classification: PROTEIN FIBRIL
Source organism: Klebsiella pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-08-16
Authors: Zheng, W., Pena, A., Frankel, G., Egelman, E.H.
PDB entry 7jsw: ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
Classification: RIBOSOME/TRANSLATION
Source organism: Escherichia coli; Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-08-16
Authors: Carbone, C.E., Korostelev, A.A.
PDB entry 7jsx: EPYC1(106-135) peptide-bound Rubisco
Classification: PLANT PROTEIN, Lyase
Source organism: Chlamydomonas reinhardtii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.06 Å
Deposited: 2020-08-16
Authors: Matthies, D., He, S., Jonikas, M.C.