LiteFold/PDB huggingface dataset:
PDB entry 3vek: Both Zn Fingers of GATA1 Bound to Palindromic DNA Recognition Site, P1 Crystal Form
Classification: TRANSCRIPTION/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2012-01-09
Authors: Jacques, D.A., Ripin, N., Wilkinson-White, L.E., Guss, J.M., Matthews, J.M.
PDB entry 3vem: Structural basis of transcriptional gene silencing mediated by Arabidopsis MOM1
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2012-01-09
Authors: Nishikura, T., Petty, T.J., Halazonetis, T., Paszkowski, J., Thore, S.
PDB entry 3ven: Crystal structure of the O-carbamoyltransferase TobZ
Classification: TRANSFERASE
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3veo: Crystal structure of the O-carbamoyltransferase TobZ in complex with carbamoyl phosphate
Classification: TRANSFERASE
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.187 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3vep: Crystal structure of SigD4 in complex with its negative regulator RsdA
Classification: MEMBRANE PROTEIN/TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2012-01-09
Authors: Jaiswal, R.K., Gopal, B.
PDB entry 3veq: A binary complex betwwen bovine pancreatic trypsin and a engineered mutant trypsin inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bos taurus; Psophocarpus tetragonolobus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-01-09
Authors: Sen, U., Majumder, S., Khamrui, S., Dasgupta, J.
PDB entry 3ver: Crystal structure of the O-carbamoyltransferase TobZ in complex with carbamoyl adenylate intermediate
Classification: TRANSFERASE
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3ves: Crystal structure of the O-carbamoyltransferase TobZ in complex with AMPCPP and carbamoyl phosphate
Classification: TRANSFERASE
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3vet: Crystal structure of the O-carbamoyltransferase TobZ in complex with Tobramycin, carbamoyl phosphate and ADP
Classification: TRANSFERASE/ANTIBIOTIC
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3veu: Crystal Structure of Human Beta Secretase in Complex with NVP-AVI326
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2012-01-09
Authors: Rondeau, J.M., Bourgier, E.
PDB entry 3vev: Glucokinase in complex with an activator and glucose
Classification: TRANSFERASE/TRANSFERASE ACTIVATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2012-01-09
Authors: Liu, S.
PDB entry 3vew: Crystal structure of the O-carbamoyltransferase TobZ in complex with ADP
Classification: TRANSFERASE
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.352 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3vex: Crystal structure of the O-carbamoyltransferase TobZ H14N variant in complex with carbamoyl adenylate intermediate
Classification: TRANSFERASE
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3vey: glucokinase in complex with glucose and ATPgS
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2012-01-09
Authors: Liu, S.
PDB entry 3vez: Crystal structure of the O-carbamoyltransferase TobZ K443A variant in complex with ATP, ADP and carbamoyl phosphate
Classification: TRANSFERASE
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3vf0: Raver1 in complex with metavinculin L954 deletion mutant
Classification: CELL ADHESION/PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2012-01-09
Authors: Lee, J.H., Vonrhein, C., Bricogne, G., Izard, T.
PDB entry 3vf1: Structure of a calcium-dependent 11R-lipoxygenase suggests a mechanism for Ca-regulation
Classification: OXIDOREDUCTASE
Source organism: Gersemia fruticosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.473 Å
Deposited: 2012-01-09
Authors: Eek, P., Jarving, R., Jarving, I., Gilbert, N.C., Newcomer, M.E., Samel, N.
PDB entry 3vf2: Crystal structure of the O-carbamoyltransferase TobZ M473I variant in complex with carbamoyl phosphate and ADP
Classification: TRANSFERASE
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3vf3: Crystal Structure of Human Beta Secretase in Complex with NVP-BQQ711
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2012-01-09
Authors: Rondeau, J.M., Bourgier, E.
PDB entry 3vf4: Crystal structure of the O-carbamoyltransferase TobZ S530A variant in complex with carbamoyl phosphate and ADP
Classification: TRANSFERASE
Source organism: Streptoalloteichus tenebrarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2012-01-09
Authors: Parthier, C., Stubbs, M.T., Goerlich, S., Jaenecke, F.
PDB entry 3vf5: Crystal Structure of HIV-1 Protease Mutant I47V with novel P1'-Ligands GRL-02031
Classification: hydrolase/hydrolase inhibitor
Source organism: Human immunodeficiency virus type 1 (BRU ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2012-01-09
Authors: Yu, X.X., Wang, Y.F., Chang, Y.C.E., Weber, I.T.
PDB entry 3vf6: Glucokinase in complex with glucose and activator
Classification: TRANSFERASE/TRANSFERASE ACTIVATOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2012-01-09
Authors: Liu, S.
PDB entry 3vf7: Crystal Structure of HIV-1 Protease Mutant L76V with novel P1'-Ligands GRL-02031
Classification: hydrolase/hydrolase inhibitor
Source organism: Human immunodeficiency virus type 1 (BRU ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2012-01-09
Authors: Yu, X.X., Wang, Y.F., Chang, Y.C.E., Weber, I.T.
PDB entry 3vf8: Crystal Structure of Spleen Tyrosine Kinase Syk Catalytic Domain with Pyrazolylbenzimidazole Inhibitor 416
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2012-01-09
Authors: McLean, L.R., Zhang, Y.
PDB entry 3vf9: Crystal Structure of Spleen Tyrosine Kinase Syk Catalytic Domain with Thienopyrazolylindole Inhibitor 027
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-09
Authors: McLean, L.R., Zhang, Y.
PDB entry 3vfa: Crystal Structure of HIV-1 Protease Mutant V82A with novel P1'-Ligands GRL-02031
Classification: hydrolase/hydrolase inhibitor
Source organism: Human immunodeficiency virus type 1 lw12.3 isolate
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2012-01-09
Authors: Yu, X.X., Wang, Y.F., Chang, Y.C.E., Weber, I.T.
PDB entry 3vfb: Crystal Structure of HIV-1 Protease Mutant N88D with novel P1'-Ligands GRL-02031
Classification: hydrolase/hydrolase inhibitor
Source organism: Human immunodeficiency virus type 1 (BRU ISOLATE)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2012-01-09
Authors: Yu, X.X., Wang, Y.F., Chang, Y.C.E., Weber, I.T.
PDB entry 3vfc: Crystal structure of enolase MSMEG_6132 (TARGET EFI-502282) from Mycobacterium smegmatis str. MC2 155 complexed with tartrate
Classification: LYASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2012-01-09
Authors: Patskovsky, Y., Toro, R., Bhosle, R., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Zencheck, W.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 3vfd: Human spastin AAA domain
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.301 Å
Deposited: 2012-01-09
Authors: Taylor, J.L., White, S.R., Lauring, B., Kull, F.J.
PDB entry 3vfe: Virtual Screening and X-Ray Crystallography for Human Kallikrein 6 Inhibitors with an Amidinothiophene P1 Group
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2012-01-09
Authors: Chen, X., Zhang, Y., Xia, T., Wang, R.
PDB entry 3vff: BlaC E166A CDC-OMe Acyl-Intermediate Complex
Classification: Hydrolase/hydrolase inhibitor
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.777 Å
Deposited: 2012-01-09
Authors: Mire, J.A., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 3vfg: Crystal structure of monoclonal antibody 3F8 Fab fragment that binds to GD2 ganglioside
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2012-01-09
Authors: Ahmed, M., Goldgur, Y., Cheung, N.-K.
PDB entry 3vfh: BlaC E166A CDC-1 Acyl-Intermediate
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2012-01-09
Authors: Mire, J.A., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)
PDB entry 3vfi: Crystal Structure of a Metagenomic Thioredoxin
Classification: ELECTRON TRANSPORT
Source organism: Silicibacter phage DSS3phi2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2012-01-09
Authors: Craig, T.K., Gardberg, A., Lorimer, D.D., Burgin Jr., A.B., Segall, A., Rohwer, F.
PDB entry 3vfj: The structure of monodechloro-teicoplanin in complex with its ligand, using MBP as a ligand carrier
Classification: SUGAR BINDING PROTEIN/ANTIBIOTIC
Source organism: Actinoplanes teichomyceticus; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2012-01-09
Authors: Economou, N.J., Weeks, S.D., Grasty, K.C., Loll, P.J.
PDB entry 3vfk: The structure of monodechloro-teicoplanin in complex with its ligand, using ubiquitin as a ligand carrier
Classification: SUGAR BINDING PROTEIN/ANTIBIOTIC
Source organism: Actinoplanes teichomyceticus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-01-09
Authors: Economou, N.J., Weeks, S.D., Grasty, K.C., Loll, P.J.
PDB entry 3vfl: Structure, Function, Stability and Knockout Phenotype of Dihydrodipicolinate Synthase from Streptococcus pneumoniae
Classification: LYASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2012-01-10
Authors: Gorman, M.A.
PDB entry 3vfm: crystal structure of HLA B*3508 LPEP155A, HLA mutant Ala155
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2012-01-10
Authors: Liu, Y.C., Rossjohn, J., Gras, S.
PDB entry 3vfn: crystal structure of HLA B*3508LPEP151A, HLA mutant Ala151
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2012-01-10
Authors: Liu, Y., Rossjohn, J., Gras, S.
PDB entry 3vfo: crystal structure of HLA B*3508 LPEP157A, HLA mutant Ala157
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2012-01-10
Authors: Liu, Y.C., Rossjohn, J., Gras, S.
PDB entry 3vfp: crystal structure of HLA B*3508 LPEP158G, HLA mutant Gly158
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-01-10
Authors: Liu, Y.C., Rossjohn, J., Gras, S.
PDB entry 3vfq: Human PARP14 (ARTD8, BAL2) - macro domains 1 and 2 in complex with adenosine-5-diphosphoribose
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2012-01-10
Authors: Karlberg, T., Thorsell, A.G., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Ekblad, T., Weigelt, J., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3vfr: crystal structure of HLA B*3508LPEP-P4Ala, peptide mutant P4-ala
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-01-10
Authors: Liu, Y.C., Rossjohn, J., Gras, S.
PDB entry 3vfs: crystal structure of HLA B*3508LPEP-P5Ala , peptide mutant P5-ala
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2012-01-10
Authors: Liu, Y.C., Rossjohn, J., Gras, S.
PDB entry 3vft: crystal structure of HLA B*3508LPEP-P6Ala, peptide mutant P6-ala
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.947 Å
Deposited: 2012-01-10
Authors: Liu, Y.C., Rossjohn, J., Gras, S.
PDB entry 3vfu: crystal structure of HLA B*3508 LPEP-P7Ala, peptide mutant P7-ala
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2012-01-10
Authors: Liu, Y.C., Rossjohn, J., Gras, S.
PDB entry 3vfv: crystal structure of HLA B*3508 LPEP-P9Ala, peptide mutant P9-ala
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2012-01-10
Authors: Liu, Y.C., Rossjohn, J., Gras, S.
PDB entry 3vfw: crystal structure of HLA B*3508 LPEP-P10Ala, peptide mutant P10-ala
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2012-01-10
Authors: Liu, Y.C., Rossjohn, J., Gras, S.
PDB entry 3vfz: Crystal structure of -35 promoter binding domain of SigD of Mycobacterium tuberculosis
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2012-01-10
Authors: Jaiswal, R.K., Thakur, K.G., Gopal, B.
PDB entry 3vg0: Antibody Fab fragment
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2012-01-10
Authors: Carpenter, B., Hemsworth, G.R., Ross, R.J., Artymiuk, P.J.
PDB entry 3vg1: Crystal Structure of Human Beta Secretase in Complex with NVP-BUR436, derived from a soaking experiment
Classification: Hydrolase/Hydrolase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2012-01-10
Authors: Rondeau, J.M., Bourgier, E.
PDB entry 3vg2: Iodide derivative of human LFABP
Classification: LIPID BINDING PROTEIN
Source organism: Homo Sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2011-08-03
Authors: Sharma, A., Yogavel, M., Sharma, A.
PDB entry 3vg3: Cadmium derivative of human LFABP
Classification: LIPID BINDING PROTEIN
Source organism: Homo Sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2011-08-03
Authors: Sharma, A., Yogavel, M., Sharma, A.
PDB entry 3vg4: Cadmium derivative of human LFABP
Classification: LIPID BINDING PROTEIN
Source organism: Homo Sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-08-03
Authors: Sharma, A., Yogavel, M., Sharma, A.
PDB entry 3vg5: Barium derivative of human LFABP
Classification: LIPID BINDING PROTEIN
Source organism: Homo Sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-03
Authors: Sharma, A., Yogavel, M., Sharma, A.
PDB entry 3vg6: Barium derivative of human LFABP
Classification: LIPID BINDING PROTEIN
Source organism: Homo Sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2011-08-03
Authors: Sharma, A., Yogavel, M., Sharma, A.
PDB entry 3vg7: Structure of human LFABP at high resolution from S-SAD
Classification: LIPID BINDING PROTEIN
Source organism: Homo Sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2011-08-03
Authors: Sharma, A., Yogavel, M., Sharma, A.
PDB entry 3vg8: Crystal structure of hypothetical protein TTHB210 from Thermus thermophilus HB8
Classification: UNKNOWN FUNCTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-08-03
Authors: Agari, Y., Sakamoto, K., Agari, K., Kuramitsu, S., Shinkai, A.
PDB entry 3vg9: Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 2.7 A resolution
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-08-04
Authors: Hino, T., Arakawa, T., Iwanari, H., Yurugi-Kobayashi, T., Ikeda-Suno, C., Nakada-Nakura, Y., Kusano-Arai, O., Weyand, S., Shimamura, T., Nomura, N., Cameron, A.D., Kobayashi, T., Hamakubo, T., Iwata, S., Murata, T.
PDB entry 3vga: Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 3.1 A resolution
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2011-08-04
Authors: Hino, T., Arakawa, T., Iwanari, H., Yurugi-Kobayashi, T., Ikeda-Suno, C., Nakada-Nakura, Y., Kusano-Arai, O., Weyand, S., Shimamura, T., Nomura, N., Cameron, A.D., Kobayashi, T., Hamakubo, T., Iwata, S., Murata, T.
PDB entry 3vgb: Crystal structure of glycosyltrehalose trehalohydrolase (GTHase) from Sulfolobus solfataricus KM1
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2011-08-09
Authors: Okazaki, N., Tamada, T., Feese, M.D., Kato, M., Miura, Y., Komeda, T., Kobayashi, K., Kondo, K., Kuroki, R.
PDB entry 3vgc: GAMMA-CHYMOTRYPSIN L-NAPHTHYL-1-ACETAMIDO BORONIC ACID ACID INHIBITOR COMPLEX
Classification: SERINE PROTEASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 1997-05-01
Authors: Stoll, V.S., Eger, B.T., Hynes, R.C., Martichonok, V., Jones, J.B., Pai, E.F.
PDB entry 3vgd: Ctystal structure of glycosyltrehalose trehalohydrolase (D252E)
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2011-08-09
Authors: Okazaki, N., Tamada, T., Feese, M.D., Kato, M., Miura, Y., Komeda, T., Kobayashi, K., Kondo, K., Kuroki, R.
PDB entry 3vge: Crystal structure of glycosyltrehalose trehalohydrolase (D252S)
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-08-09
Authors: Okazaki, N., Tamada, T., Feese, M.D., Kato, M., Miura, Y., Komeda, T., Kobayashi, K., Kondo, K., Kuroki, R.
PDB entry 3vgf: Crystal structure of glycosyltrehalose trehalohydrolase (D252S) complexed with maltotriosyltrehalose
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-09
Authors: Okazaki, N., Tamada, T., Feese, M.D., Kato, M., Miura, Y., Komeda, T., Kobayashi, K., Kondo, K., Kuroki, R.
PDB entry 3vgg: Crystal structure of glycosyltrehalose trehalohydrolase (E283Q) complexed with maltoheptaose
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2011-08-09
Authors: Okazaki, N., Tamada, T., Feese, M.D., Kato, M., Miura, Y., Komeda, T., Kobayashi, K., Kondo, K., Kuroki, R.
PDB entry 3vgh: Crystal structure of glycosyltrehalose trehalohydrolase (E283Q) complexed with maltotriosyltrehalose
Classification: HYDROLASE
Source organism: Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-08-09
Authors: Okazaki, N., Tamada, T., Feese, M.D., Kato, M., Miura, Y., Komeda, T., Kobayashi, K., Kondo, K., Kuroki, R.
PDB entry 3vgi: The crystal structure of hyperthermophilic family 12 endocellulase from Pyrococcus furiosus
Classification: HYDROLASE
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2011-08-11
Authors: Kataoka, M., Kim, H.-W., Ishikawa, K.
PDB entry 3vgj: Crystal of Plasmodium falciparum tyrosyl-tRNA synthetase (PfTyrRS)in complex with adenylate analog
Classification: LIGASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.212 Å
Deposited: 2011-08-14
Authors: Banday, M.M., Yogavel, M., Bhatt, T.K., Khan, S., Sharma, A., Sharma, A.
PDB entry 3vgk: Crystal structure of a ROK family glucokinase from Streptomyces griseus
Classification: TRANSFERASE
Source organism: Streptomyces griseus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2011-08-15
Authors: Miyazono, K., Tabei, N., Morita, S., Ohnishi, Y., Horinouchi, S., Tanokura, M.
PDB entry 3vgl: Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose and AMPPNP
Classification: TRANSFERASE
Source organism: Streptomyces griseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2011-08-15
Authors: Miyazono, K., Tabei, N., Morita, S., Ohnishi, Y., Horinouchi, S., Tanokura, M.
PDB entry 3vgm: Crystal structure of a ROK family glucokinase from Streptomyces griseus in complex with glucose
Classification: TRANSFERASE
Source organism: Streptomyces griseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2011-08-15
Authors: Miyazono, K., Tabei, N., Morita, S., Ohnishi, Y., Horinouchi, S., Tanokura, M.
PDB entry 3vgn: Crystal Structure of Ketosteroid Isomerase D40N from Pseudomonas putida (pKSI) with bound 3-fluoro-4-nitrophenol
Classification: ISOMERASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2011-08-16
Authors: Caaveiro, J.M.M., Pybus, B., Ringe, D., Petsko, G.A., Sigala, P.A.
PDB entry 3vgo: Crystal structure of the N-terminal fragment of Cbl-b
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2011-08-18
Authors: Kobashigawa, Y., Noda, N.N., Inagaki, F.
PDB entry 3vgp: Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (AF_0329) from Archaeoglobus fulgidus
Classification: TRANSFERASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2011-08-18
Authors: Matsumoto, S., Igura, M., Nyirenda, J., Yuzawa, S., Noda, N.N., Inagaki, F., Kohda, D.
PDB entry 3vgs: Wild-type nucleoside diphosphate kinase derived from Halomonas sp. 593
Classification: TRANSFERASE
Source organism: Halomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-20
Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
PDB entry 3vgt: Wild-type nucleoside diphosphate kinase derived from Halomonas sp. 593
Classification: TRANSFERASE
Source organism: Halomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-08-21
Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
PDB entry 3vgu: E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593
Classification: TRANSFERASE
Source organism: Halomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-08-21
Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
PDB entry 3vgv: E134A mutant nucleoside diphosphate kinase derived from Halomonas sp. 593
Classification: TRANSFERASE
Source organism: Halomonas
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-08-21
Authors: Okazaki, N., Yonezawa, Y., Arai, S., Matsumoto, F., Tamada, T., Tokunaga, H., Ishibashi, M., Tokunaga, M., Kuroki, R.
PDB entry 3vgw: Crystal structure of monoAc-biotin-avidin complex
Classification: BIOTIN-BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2011-08-21
Authors: Terai, T., Maki, E., Sugiyama, S., Takahashi, Y., Matsumura, H., Mori, Y., Nagano, T.
PDB entry 3vgx: Structure of gp41 T21/Cp621-652
Classification: MEMBRANE PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2011-08-22
Authors: Yao, X., Waltersperger, S., Wang, M., Cui, S.
PDB entry 3vgy: Structure of HIV-1 gp41 NHR/fusion inhibitor complex P321
Classification: MEMBRANE PROTEIN/INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 2.034 Å
Deposited: 2011-08-22
Authors: Yao, X., Waltersperger, S., Wang, M.T., Cui, S.
PDB entry 3vgz: Crystal structure of E. coli YncE
Classification: PROTEIN BINDING
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-08-23
Authors: Kagawa, W., Sagawa, T., Niki, H., Kurumizaka, H.
PDB entry 3vh0: Crystal structure of E. coli YncE complexed with DNA
Classification: PROTEIN BINDING/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2011-08-23
Authors: Kagawa, W., Sagawa, T., Niki, H., Kurumizaka, H.
PDB entry 3vh1: Crystal structure of Saccharomyces cerevisiae Atg7 (1-595)
Classification: METAL BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2011-08-23
Authors: Noda, N.N., Satoo, K., Inagaki, F.
PDB entry 3vh2: Crystal structure of Saccharomyces cerevisiae Atg7 (1-613)
Classification: METAL BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2011-08-23
Authors: Noda, N.N., Satoo, K., Inagaki, F.
PDB entry 3vh3: Crystal structure of Atg7CTD-Atg8 complex
Classification: METAL BINDING PROTEIN/PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-23
Authors: Noda, N.N., Satoo, K., Inagaki, F.
PDB entry 3vh4: Crystal structure of Atg7CTD-Atg8-MgATP complex
Classification: METAL BINDING PROTEIN/PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2011-08-23
Authors: Noda, N.N., Satoo, K., Inagaki, F.
PDB entry 3vh5: Crystal structure of the chicken CENP-T histone fold/CENP-W/CENP-S/CENP-X heterotetrameric complex, crystal form I
Classification: DNA BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2011-08-23
Authors: Nishino, T., Takeuchi, K., Gascoigne, K.E., Suzuki, A., Hori, T., Oyama, T., Morikawa, K., Cheeseman, I.M., Fukagawa, T.
PDB entry 3vh6: Crystal structure of the chicken CENP-T histone fold/CENP-W/CENP-S/CENP-X heterotetrameric complex, crystal form II
Classification: DNA BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.351 Å
Deposited: 2011-08-23
Authors: Nishino, T., Takeuchi, K., Gascoigne, K.E., Suzuki, A., Hori, T., Oyama, T., Morikawa, K., Cheeseman, I.M., Fukagawa, T.
PDB entry 3vh7: Structure of HIV-1 gp41 NHR/fusion inhibitor complex P21
Classification: MEMBRANE PROTEIN/INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 2.019 Å
Deposited: 2011-08-23
Authors: Yao, X., Waltersperger, S., Wang, M.T., Cui, S.
PDB entry 3vh8: KIR3DL1 in complex with HLA-B*5701
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-08-24
Authors: Vivian, J.P., Rossjohn, J.
PDB entry 3vh9: Crystal structure of Aeromonas proteolytica aminopeptidase complexed with 8-quinolinol
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Vibrio proteolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2011-08-24
Authors: Saijo, S., Hanaya, K., Suetsugu, M., Kobayashi, K., Yamato, I., Aoki, S.
PDB entry 3vha: Hsp90 alpha N-terminal domain in complex with a macrocyclic inhibitor
Classification: CHAPERONE/CHAPERONE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2011-08-24
Authors: Fukami, T.A., Ono, N.
PDB entry 3vhb: IMIDAZOLE ADDUCT OF THE BACTERIAL HEMOGLOBIN FROM VITREOSCILLA SP.
Classification: OXYGEN STORAGE/TRANSPORT
Source organism: Vitreoscilla stercoraria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 1999-03-17
Authors: Bolognesi, M., Boffi, A., Coletta, M., Mozzarelli, A., Pesce, A., Tarricone, C., Ascenzi, P.
PDB entry 3vhc: Hsp90 alpha N-terminal domain in complex with a macrocyclic inhibitor
Classification: CHAPERONE/CHAPERONE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2011-08-24
Authors: Fukami, T.A., Ono, N.
PDB entry 3vhd: Hsp90 alpha N-terminal domain in complex with a macrocyclic inhibitor, CH5164840
Classification: CHAPERONE/CHAPERONE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2011-08-24
Authors: Fukami, T.A., Ono, N.
PDB entry 3vhe: Crystal structure of human VEGFR2 kinase domain with a novel pyrrolopyrimidine inhibitor.
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2011-08-24
Authors: Oguro, Y., Miyamoto, N., Okada, K., Takagi, T., Iwata, H., Awazu, Y., Miki, H., Hori, A., Kamiyama, K., Imanura, S.
PDB entry 3vhf: plant thaumatin I at pH 8.0
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2011-08-24
Authors: Masuda, T., Mikami, B., Kitabatake, N., Tani, F.
PDB entry 3vhg: Recombinant thaumatin I at PH 8.0
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2011-08-24
Authors: Masuda, T., Mikami, B., Kitabatake, N., Tani, F.
PDB entry 3vhh: Crystal structure of DiMe-biotin-avidin complex
Classification: BIOTIN-BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2011-08-25
Authors: Terai, T., Maki, E., Sugiyama, S., Takahashi, Y., Matsumura, H., Mori, Y., Nagano, T.
PDB entry 3vhi: Crystal structure of monoZ-biotin-avidin complex
Classification: BIOTIN-BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2011-08-25
Authors: Terai, T., Maki, E., Sugiyama, S., Takahashi, Y., Matsumura, H., Mori, Y., Nagano, T.
PDB entry 3vhj: Crystal structure of the cytoplasmic domain of BfpC
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-08-25
Authors: Yamagata, A., Tainer, J.A., Donnenberg, M.S.
PDB entry 3vhk: Crystal structure of the VEGFR2 kinase domain in complex with a back pocket binder
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2011-08-25
Authors: Iwata, H., Oki, H., Okada, K., Takagi, T., Tawada, M., Miyazaki, Y., Imamura, S., Hori, A., Hixon, M.S., Kimura, H., Miki, H.
PDB entry 3vhl: Crystal structure of the DHR-2 domain of DOCK8 in complex with Cdc42 (T17N mutant)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.085 Å
Deposited: 2011-08-26
Authors: Hanawa-Suetsugu, K., Kukimoto-Niino, M., Nishizak, T., Terada, T., Shirouzu, M., Fukui, Y., Yokoyama, S.
PDB entry 3vhm: Crystal structure of NPC-biotin-avidin complex
Classification: BIOTIN-BINDING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-08-29
Authors: Terai, T., Maki, E., Sugiyama, S., Takahashi, Y., Matsumura, H., Mori, Y., Nagano, T.
PDB entry 3vhn: Y61G mutant of Cellulase 12A from thermotoga maritima
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-08-30
Authors: Cheng, Y.-S., Ko, T.-P., Guo, R.-T., Liu, J.-R.
PDB entry 3vho: Y61-gg insertion mutant of Tm-Cellulase 12A
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2011-08-30
Authors: Cheng, Y.-S., Ko, T.-P., Guo, R.-T., Liu, J.-R.
PDB entry 3vhp: The insertion mutant Y61GG of Tm Cel12A
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2011-08-30
Authors: Cheng, Y.-S., Ko, T.-P., Guo, R.-T., Liu, J.-R.
PDB entry 3vhq: Crystal structure of the Ca6 site mutant of Pro-SA-subtilisin
Classification: HYDROLASE
Source organism: Thermococcus kodakarensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2011-09-01
Authors: Uehara, R., Takeuchi, Y., Tanaka, S., Matsumura, H., Koga, Y., Takano, K., Kanaya, S.
PDB entry 3vhr: Crystal Structure of capsular polysaccharide assembling protein CapF from Staphylococcus aureus in space group C2221
Classification: OXIDOREDUCTASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-09-01
Authors: Miyafusa, T., Yoshikazu, T., Caaveiro, J.M.M., Tsumoto, K.
PDB entry 3vhs: Crystal structure of UBZ of human WRNIP1
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-09-06
Authors: Suzuki, N., Wakatsuki, S., Kawasaki, M.
PDB entry 3vht: Crystal structure of GFP-Wrnip1 UBZ domain fusion protein in complex with ubiquitin
Classification: FLUORESCENT PROTEIN/PROTEIN BINDING
Source organism: Aequorea victoria; Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2011-09-06
Authors: Suzuki, N., Wakatsuki, S., Kawasaki, M.
PDB entry 3vhu: Mineralocorticoid receptor ligand-binding domain with spironolactone
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2011-09-07
Authors: Sogabe, S., Habuka, N.
PDB entry 3vhv: Mineralocorticoid receptor ligand-binding domain with non-steroidal antagonist
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2011-09-07
Authors: Sogabe, S., Habuka, N.
PDB entry 3vhw: Crystal structure of the human vitamin D receptor ligand binding domain complexed with 4-MP
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2011-09-08
Authors: Kakuda, S., Takimoto-Kamimura, M.
PDB entry 3vhx: The crystal structure of Arf6-MKLP1 (Mitotic kinesin-like protein 1) complex
Classification: CELL CYCLE/SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2011-09-12
Authors: Makyio, H., Takei, T., Ohgi, H., Takahashi, S., Takatsu, H., Ueda, T., Kanaho, Y., Xie, Y., Shin, H.W., Kamikubo, H., Kataoka, M., Kawasaki, M., Kato, R., Wakatsuki, S., Nakayama, K.
PDB entry 3vhz: Crystal structure of the trans isomer of the L93A mutant of bacteriorhodopsin
Classification: PROTON TRANSPORT
Source organism: Halobacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-09-13
Authors: Kouyama, T., Zhang, J.
PDB entry 3vi0: Crystal structure of the O intermediate of the L93A mutant of bacteriorhodopsin
Classification: PROTON TRANSPORT
Source organism: Halobacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-09-13
Authors: Kouyama, T., Zhang, J.
PDB entry 3vi1: Crystal structure of Pseudomonas aerginosa alkaline protease complexed with Substance P(1-6)
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-09-13
Authors: Matoba, K., Harada, S.
PDB entry 3vi2: Crystal Structure Analysis of Plasmodium falciparum OMP Decarboxylase in complex with inhibitor HMOA
Classification: LYASE/LYASE INHIBITOR
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-09-16
Authors: Takashima, Y., Mizohata, E., Krungkrai, S.R., Matsumura, H., Krungkrai, J., Horii, T., Inoue, T.
PDB entry 3vi3: Crystal structure of alpha5beta1 integrin headpiece (ligand-free form)
Classification: CELL ADHESION/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2011-09-21
Authors: Nagae, M., Nogi, T., Takagi, J.
PDB entry 3vi4: Crystal structure of alpha5beta1 integrin headpiece in complex with RGD peptide
Classification: CELL ADHESION/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2011-09-21
Authors: Nagae, M., Nogi, T., Takagi, J.
PDB entry 3vi5: Human hematopoietic prostaglandin D synthase inhibitor complex structures
Classification: Isomerase/Isomerase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-09-21
Authors: Kado, Y., Inoue, T.
PDB entry 3vi6: Crystal Structure of human ribosomal protein L30e
Classification: RIBOSOMAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2011-09-21
Authors: Kawaguchi, A., Ose, T., Yao, M., Tanaka, I.
PDB entry 3vi7: Human hematopoietic prostaglandin D synthase inhibitor complex structures
Classification: Isomerase/Isomerase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-09-21
Authors: Kado, Y., Inoue, T.
PDB entry 3vi8: Human PPAR alpha ligand binding domain in complex with a synthetic agonist APHM13
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2011-09-25
Authors: Oyama, T., Miyachi, H., Morikawa, K.
PDB entry 3via: Crystal structure of the PH domain of Evectin-2 from human
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2011-09-26
Authors: Okazaki, S., Kato, R., Wakatsuki, S.
PDB entry 3vib: Structural basis for multidrug recognition and antimicrobial resistance by MTRR, an efflux pump regulator from Neisseria Gonorrhoeae
Classification: DNA BINDING PROTEIN
Source organism: Neisseria gonorrhoeae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2011-09-27
Authors: Kumaraswami, M., Shafer, W.M., Brennan, R.G.
PDB entry 3vic: Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5
Classification: FLUORESCENT PROTEIN
Source organism: Montipora efflorescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-09-28
Authors: Battad, J.M., Traore, D.A.K., Byres, E., Wilce, M., Devenish, R.J., Rossjohn, J., Prescott, M.
PDB entry 3vid: Crystal structure of human VEGFR2 kinase domain with Compound A.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-09-29
Authors: Iwata, H., Oki, H., Okada, K., Takagi, T., Tawada, M., Miyazaki, Y., Imamura, S., Hori, A., Hixon, M.S., Kimura, H., Miki, H.
PDB entry 3vie: HIV-gp41 fusion inhibitor Sifuvirtide
Classification: VIRAL PROTEIN/ANTIVIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-09-29
Authors: Yao, X., Waltersperger, S., Wang, M.T., Cui, S.
PDB entry 3vif: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with gluconolactone
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vig: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vih: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with glycerol
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vii: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Bis-Tris
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vij: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with glucose
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vik: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with cellobiose
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vil: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with salicin
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vim: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vin: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vio: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3vip: Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
Classification: HYDROLASE
Source organism: Neotermes koshunensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2011-10-03
Authors: Jeng, W.Y., Liu, C.I., Wang, A.H.J.
PDB entry 3viq: Crystal structure of Swi5-Sfr1 complex from fission yeast
Classification: RECOMBINATION ACTIVATOR
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-10-06
Authors: Kuwabara, N., Murayama, Y., Hashimoto, H., Kokabu, Y., Ikeguchi, M., Sato, M., Mayanagi, K., Tsutsui, Y., Iwasaki, H., Shimizu, T.
PDB entry 3vir: Crystal strcture of Swi5 from fission yeast
Classification: RECOMBINATION ACTIVATOR
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-10-06
Authors: Kuwabara, N., Yamada, N., Hashimoto, H., Sato, M., Iwasaki, H., Shimizu, T.
PDB entry 3vis: Crystal structure of cutinase Est119 from Thermobifida alba AHK119
Classification: HYDROLASE
Source organism: Thermobifida alba
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2011-10-11
Authors: Kitadokoro, K., Thumarat, U., Nakamura, R., Nishimura, K., Karatani, H., Suzuki, H., Kawai, F.
PDB entry 3viu: Crystal structure of PurL from thermus thermophilus
Classification: LIGASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2011-10-12
Authors: Suzuki, S., Yanai, H., Kanagawa, M., Tamura, S., Watanabe, Y., Fuse, K., Baba, S., Sampei, G., Kawai, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 3viv: 1510-N membrane-bound stomatin-specific protease K138A mutant in complex with a substrate peptide
Classification: HYDROLASE/PROTEIN BINDING
Source organism: Pyrococcus horikoshii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2011-10-12
Authors: Yokoyama, H., Matsui, I., Fujii, S.
PDB entry 3vj6: Structure of the MHC class Ib molecule Qa-1b
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-10-12
Authors: Zeng, L., Clements, C.S., Rossjohn, J.
PDB entry 3vj7: Crystal structure of the carboxy-terminal ribonuclease domain of Colicin E5 R33Q mutant
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-10-13
Authors: Yajima, S., Inoue, S., Fushinobu, S., Ogawa, T., Hidaka, M., Masaki, H.
PDB entry 3vj8: Crystal structure of the human squalene synthase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2011-10-14
Authors: Liu, C.I., Jeng, W.Y., Chang, W.J., Wang, A.H.J.
PDB entry 3vj9: Crystal structure of the human squalene synthase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2011-10-14
Authors: Liu, C.I., Jeng, W.Y., Chang, W.J., Wang, A.H.J.
PDB entry 3vja: Crystal structure of the human squalene synthase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2011-10-14
Authors: Liu, C.I., Jeng, W.Y., Chang, W.J., Wang, A.H.J.
PDB entry 3vjb: Crystal structure of the human squalene synthase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2011-10-14
Authors: Liu, C.I., Jeng, W.Y., Chang, W.J., Wang, A.H.J.
PDB entry 3vjc: Crystal structure of the human squalene synthase in complex with zaragozic acid A
Classification: Transferase/Transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2011-10-14
Authors: Liu, C.I., Jeng, W.Y., Chang, W.J., Ko, T.P., Wang, A.H.J.
PDB entry 3vjd: Crystal structure of the Y248A mutant of C(30) carotenoid dehydrosqualene synthase from Staphylococcus aureus
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2011-10-14
Authors: Liu, C.I., Jeng, W.Y., Chang, W.J., Wang, A.H.J.