LiteFold/PDB huggingface dataset:
PDB entry 9u9q: Tubulin-RB3-TTL in complex with C38
Classification: CELL CYCLE
Source organism: Gallus gallus; Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.93 Å
Deposited: 2025-03-29
Authors: Yan, W., Yang, J.H.
PDB entry 9u9r: ARF1(Q71L) bound M4-CTD-undocked AP-4 core
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.6 Å
Deposited: 2025-03-29
Authors: Wang, Y.H., Li, W.
PDB entry 9u9s: ARF1(Q71L) bound M4-CTD-docked AP-4 core
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.8 Å
Deposited: 2025-03-29
Authors: Wang, Y.H., Li, W.
PDB entry 9u9t: Serine Beta-Lactamase OXA-48 in complex with Dual MBL/SBL inhibitor FB1-9
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.464 Å
Deposited: 2025-03-29
Authors: Li, G.-B., Liang, G.-Q.
PDB entry 9u9u: Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Lys181Lys/Trp185Tyr/His280Ala with (S)-2-fluoro-3-(4-(trifluoromethyl)phenyl)propanoic acid
Classification: TRANSFERASE
Source organism: Rhodopseudomonas palustris CGA009
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2025-03-29
Authors: Huang, H.S., Zhang, Z.M.
PDB entry 9u9v: beta2-adrenergic receptor in complex with methamphetamine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2025-03-29
Authors: Shan, W., Shan, W.
PDB entry 9u9x: 1H, 13C, and 15N resonance assignments and solution structure of the CID domain of SCAF8 (RBM16)
Classification: STRUCTURAL GENOMICS
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2025-03-30
Authors: Kuwasako, K., Dang, W., He, F., Takahashi, M., Tsuda, K., Nagata, T., Tanaka, A., Koayashi, N., Kigawa, T., Guentert, P., Shirouzu, M., Yokoyama, S., Muto, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 9u9y: Cryo-EM structure of retron Ec78 effector complex
Classification: ANTIVIRAL PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-03-30
Authors: Liu, Z., Zhang, H.
PDB entry 9u9z: Cryo-EM structure of cyanobacterial bicarbonate transporter CmpBCD
Classification: MEMBRANE PROTEIN
Source organism: Pseudanabaena sp. Chao 1811
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-03-30
Authors: Li, Q.Y., Li, B., Zhou, C.Z., Jiang, Y.L.
PDB entry 9ua0: Cryo-EM structure of cyanobacterial bicarbonate transporter CmpBCD in the presence of nitrate
Classification: MEMBRANE PROTEIN
Source organism: Pseudanabaena sp. Chao 1811
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2025-03-31
Authors: Li, Q.Y., Li, B., Zhou, C.Z., Jiang, Y.L.
PDB entry 9ua1: Cryo-EM structure of cyanobacterial bicarbonate transporter CmpBCD in complex with ATP
Classification: MEMBRANE PROTEIN
Source organism: Pseudanabaena sp. Chao 1811
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2025-03-31
Authors: Li, Q.Y., Li, B., Zhou, C.Z., Jiang, Y.L.
PDB entry 9ua2: Cryo-EM structure of PsCas9-sgRNA-dsDNA (30 nt) ternary complex
Classification: RNA BINDING PROTEIN
Source organism: Parasutterella secunda
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2025-03-31
Authors: Shen, P.P., Lu, X.Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9ua3: Cryo-EM structure of neddylated CUL2-RBX1-FEM1C-ELOB-ELOC
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2025-03-31
Authors: Zhou, H., Xu, C.
PDB entry 9ua5: RABV G binding with CTB011 Fab and CTB012 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Lyssavirus rabies; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2025-03-31
Authors: Cao, L., Zhang, C.
PDB entry 9ua8: structure of PTP-MEG2 and IFG1R-pY1165/pY1166 peptide complex
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.999 Å
Deposited: 2025-03-31
Authors: Hu, J., Liu, H., Zhang, M.
PDB entry 9ua9: Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 1D6
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Henipavirus nipahense; Macaca
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.99 Å
Deposited: 2025-03-31
Authors: Fan, P.F., Ren, Y., Yu, C.M., Chen, W.
PDB entry 9uaa: Nipah virus fusion glycoprotein in complex with a broadly neutralizing antibody 5C8
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Henipavirus nipahense; Macaca
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2025-03-31
Authors: Fan, P.F., Ren, Y., Yu, C.M., Chen, W.
PDB entry 9uab: Crystal structure of the OkaE-M64A mutant with coblat(II)
Classification: OXIDOREDUCTASE
Source organism: Penicillium simplicissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2025-03-31
Authors: Yu, J.J., Yan, W.P., Wang, X.Y.
PDB entry 9uac: Crystal structure of the OkaE-M64A mutant with a-ketoglutarate
Classification: OXIDOREDUCTASE
Source organism: Penicillium simplicissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2025-03-31
Authors: Yu, J.J., Yan, W.P., Wang, X.Y.
PDB entry 9uad: Crystal structure of the OkaE-M64A mutant with a-ketoglutarate and okaramine A
Classification: OXIDOREDUCTASE
Source organism: Penicillium simplicissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2025-03-31
Authors: Yu, J.J., Yan, W.P., Wang, X.Y.
PDB entry 9uae: Crystal structure of the OkaE-M71A mutant with coblat(II)
Classification: OXIDOREDUCTASE
Source organism: Penicillium simplicissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-03-31
Authors: Yu, J.J., Yan, W.P., Wang, X.Y.
PDB entry 9uaf: Crystal structure of the OkaE-M71A mutant with a-ketoglutarate
Classification: OXIDOREDUCTASE
Source organism: Penicillium simplicissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2025-03-31
Authors: Yu, J.J., Yan, W.P., Wang, X.Y.
PDB entry 9uag: Crystal structure of the OkaE-M71A mutant with a-ketoglutarate and okaramine A
Classification: OXIDOREDUCTASE
Source organism: Penicillium simplicissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2025-03-31
Authors: Yu, J.J., Yan, W.P., Wang, X.Y.
PDB entry 9uah: Crystal structure of the OkaE-W79A mutant with a-ketoglutarate and okaramine A
Classification: OXIDOREDUCTASE
Source organism: Penicillium simplicissimum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-03-31
Authors: Yu, J.J., Yan, W.P., Wang, X.Y.
PDB entry 9uai: Crystal structure of cyanobacterial CRD of CmpBCD in the presence of nitrate
Classification: TRANSPORT PROTEIN
Source organism: Pseudanabaena sp. Chao 1811
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-04-01
Authors: Li, Q.Y., Li, B., Zhou, C.Z., Jiang, Y.L.
PDB entry 9uaj: Ovorubin from the golden apple snail (Pomacea canaliculata)
Classification: LIPID BINDING PROTEIN
Source organism: Pomacea canaliculata
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.12 Å
Deposited: 2025-04-01
Authors: Wangkanont, K., Saw, W.-G., Tran, B.N., Wilasluck, P.
PDB entry 9uak: Crystal structure of C terminal regulatory domain of cyanobacterial bicarbonate transporter CmpABCD
Classification: TRANSPORT PROTEIN
Source organism: Pseudanabaena sp. Chao 1811
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-04-01
Authors: Li, Q.Y., Li, B., Zhou, C.Z., Jiang, Y.L.
PDB entry 9ual: Crystal structure of Trimucrin
Classification: BLOOD CLOTTING
Source organism: Protobothrops mucrosquamatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2025-04-01
Authors: Chang, Y.T., Chuang, W.J.
PDB entry 9uam: CysLTR2-LTC4-miniGq complex
Classification: BINDING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-04-01
Authors: Wang, C., Liu, H.
PDB entry 9uan: CysLTR2-LTD4-miniGq complex
Classification: LIPID BINDING PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-04-01
Authors: Wang, C., Liu, H.
PDB entry 9uap: cryo-EM structure of ligand-free active-state M1 muscarinic acetylcholine receptor with alpha5 helix of G11 protein complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2025-04-01
Authors: Zhang, X., Gao, K., Liu, X.
PDB entry 9uaq: CryoEM structure of GFP-like protein from Aequorea coerulescens with Trimbody
Classification: STRUCTURAL PROTEIN
Source organism: Aequorea coerulescens; synthetic construct; Thermotoga maritima MSB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.29 Å
Deposited: 2025-04-01
Authors: Song, J.Y., Wang, W.
PDB entry 9uar: CTP synthase DON-state
Classification: LIGASE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.99 Å
Deposited: 2025-04-01
Authors: Guo, C.J.
PDB entry 9uas: PSI-LHCE-LHCII from Euglena gracilis
Classification: PHOTOSYNTHESIS
Source organism: Euglena gracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2025-04-01
Authors: Feng, Y.
PDB entry 9uat: The structure of mCAT1 in complex with its substrate ornithine and the RBD of FrMLV.
Classification: MEMBRANE PROTEIN
Source organism: Friend murine leukemia virus (ISOLATE 57); Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Deposited: 2025-04-01
Authors: Xia, L.Y., Yang, Y., Chen, X.M.
PDB entry 9uau: CDK2_LL-DA-3
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2025-04-01
Authors: Ge, S.
PDB entry 9uav: Cryo-EM structure of HRD1-SEL1L-XTP3B (state D2) complex
Classification: ALLERGEN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-04-01
Authors: Qian, H.W., Liu, G.Y.
PDB entry 9uaw: LL-DA-4-cdk2 protein
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2025-04-01
Authors: Ge, S.
PDB entry 9uax: The structure of Myanmar_N2 and AS4C_Fab complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/California/VRDL364/2009(mixed))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2025-04-01
Authors: Sun, J.Q., Yang, H.
PDB entry 9uay: Crystal structure of CmnI
Classification: TRANSFERASE
Source organism: Saccharothrix mutabilis subsp. capreolus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2025-04-01
Authors: Hsiao, P.Y., Chang, C.Y., Peng, C.Y.
PDB entry 9uaz: Cryo-EM structure of the M1 muscarinic acetylcholine receptor bound to atropine and nanobody NbA12
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2025-04-02
Authors: Zhang, X., Gao, K., Liu, X.
PDB entry 9ub0: effector of a plant pathogen
Classification: TOXIN
Source organism: Colletotrichum higginsianum
Experimental method: SOLUTION NMR
Deposited: 2025-04-02
Authors: Ohki, S., Mori, M.
PDB entry 9ub1: The structure of Myanmar_N2 and M6B12_Fab complex
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus (A/California/VRDL364/2009(mixed))
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2025-04-02
Authors: Sun, J.Q., Yang, H.
PDB entry 9ub2: Crystal structure of human DHODH in complex with inhibitor 006
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-02
Authors: Jun, L., Zhaomin, X., Caiyue, C., Yuanyuan, Z., Jin, H.
PDB entry 9ub3: The structure of the apo-AglA from Streptomyces monomycini
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces monomycini
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2025-04-02
Authors: Sun, Y., Dou, C., Yan, W., Zhou, D., Zhu, X., Cheng, W.
PDB entry 9ub5: The structure of the AglA-Arg complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces monomycini
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2025-04-02
Authors: Sun, Y., Dou, C., Yan, W., Zhou, D., Zhu, X., Cheng, W.
PDB entry 9ub6: Crystal structure of SFTSV Gn head with nanobody VHH261
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; SFTS virus HB29
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2025-04-02
Authors: Wu, Y., Chang, Z., Wu, X.
PDB entry 9ub7: Structure of glycosylphosphatidylinositol transamidase,state 1
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2025-04-02
Authors: Hua, Z.K., Ding, X.Y., Zhang, M., Liu, X.T., Zhang, M.J., Yu, H.J.
PDB entry 9ub8: Structure of glycosylphosphatidylinositol transamidase,state 2
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.41 Å
Deposited: 2025-04-02
Authors: Hua, Z.K., Ding, X.Y., Zhang, M., Liu, X.T., Zhang, M.J., Yu, H.J.
PDB entry 9ub9: Wild-type Bacillus megaterium Penicillin G Acylase
Classification: STRUCTURAL PROTEIN
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2025-04-02
Authors: Kaewsasan, C., Rojviriya, C., Yuvaniyama, J.
PDB entry 9uba: The structure of the AglA_K196R-Arg complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces monomycini
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2025-04-02
Authors: Sun, Y., Dou, C., Yan, W., Zhou, D., Zhu, X., Cheng, W.
PDB entry 9ubb: The structure of the AglA_K225E-Arg complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces monomycini
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2025-04-02
Authors: Sun, Y., Dou, C., Yan, W., Zhou, D., Zhu, X., Cheng, W.
PDB entry 9ubc: Sub-particle structure of the iterative acetyltransferase from Actinomycetes in complex with AcCoA and monoacetylated lasso peptides
Classification: TRANSFERASE
Source organism: Actinosynnema mirum DSM 43827
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2025-04-02
Authors: Wu, S., Xiong, J., Lei, D., Dong, S.
PDB entry 9ubd: The Structural Basis of the Recognition of the Histone Variant H2A.Z by the SRCAP Catalytic Subunit
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2025-04-02
Authors: Tan, W.S., Jiang, J.S., Hong, J.J.
PDB entry 9ube: Metallo-Beta-Lactamase VIM-2 in Complex with MBL/SBL Inhibitor FB1-9
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-03
Authors: Li, G.-B., Wei, S.-Q.
PDB entry 9ubf: X-ray structure of Clostridioides difficile autolysin Acd33800 catalytic domain
Classification: ANTIMICROBIAL PROTEIN
Source organism: Clostridioides difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2025-04-03
Authors: Kamitori, S., Nonaka, Y., Sekiya, H., Tamai, E.
PDB entry 9ubg: Cryo-EM structure of Pyruvate carboxylase from Mycobacterium tuberculosis in complex with Acetyl-CoA and ADP
Classification: LIGASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-04-03
Authors: Singh, A., Sharma, D., Raza, M., Singh, S., Das, U.
PDB entry 9ubi: Crystal structure of FERONIA kinase and Ferovicin inhibitor
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-03
Authors: Sun, M.Z., Fan, J.P., Lei, X.G.
PDB entry 9ubl: The structure of type III CRISPR-associated deaminase in complex cA6 and ATP, state 3
Classification: HYDROLASE/RNA
Source organism: Thermoanaerobaculum aquaticum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2025-04-03
Authors: Wu, W.Q., Kong, J.P., Li, Z.X., Xiao, Y.B.
PDB entry 9ubm: The structure of type III CRISPR-associated deaminase in complex cA6 and ATP, state 4
Classification: HYDROLASE/RNA
Source organism: Thermoanaerobaculum aquaticum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2025-04-03
Authors: Kong, J.P., Wu, W.Q., Li, Z.X., Xiao, Y.B.
PDB entry 9ubo: The structure of type III CRISPR-associated deaminase in complex cA6 and ATP, state 5
Classification: HYDROLASE/RNA
Source organism: Thermoanaerobaculum aquaticum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2025-04-03
Authors: Kong, J.P., Wu, W.Q., Li, Z.X., Xiao, Y.B.
PDB entry 9ubq: HBsAg in complex with H020 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Hepatitis B virus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2025-04-03
Authors: Chen, L., Tao, W., He, X.
PDB entry 9ubr: CryoEM structure of human Galectin-10 with iTrimbody
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; synthetic construct; Thermotoga maritima MSB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2025-04-03
Authors: Song, J.Y., Wang, W.
PDB entry 9ubs: The structure of the AglA_T220R-Arg complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces monomycini
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2025-04-03
Authors: Sun, Y., Dou, C., Yan, W., Zhou, D., Zhu, X., Cheng, W.
PDB entry 9ubt: The structure of the AglA-Ampn-Arg complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces monomycini
Experimental method: X-RAY DIFFRACTION
Resolution: 1.596 Å
Deposited: 2025-04-03
Authors: Sun, Y., Dou, C., Yan, W., Zhou, D., Zhu, X., Cheng, W.
PDB entry 9ubw: The atomic coordinates of the mouse CatSper dimer
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2025-04-03
Authors: Xu, Q., Lin, S., Zhao, Q., Yan, Z., Wu, J.
PDB entry 9ubx: The atomic coordinates of the mouse CatSper trimer
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.8 Å
Deposited: 2025-04-03
Authors: Xu, Q., Lin, S., Zhao, Q., Yan, Z., Wu, J.
PDB entry 9uc1: Crystal structure of voltage-gated sodium channel NavAb N49K/S178T mutant
Classification: MEMBRANE PROTEIN
Source organism: Aliarcobacter butzleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-03
Authors: Irie, K., Maeda, Y., Kojima, K.
PDB entry 9uc2: Crystal structure of voltage-gated sodium channel NavAb N49K/S178A mutant
Classification: MEMBRANE PROTEIN
Source organism: Aliarcobacter butzleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-04-03
Authors: Irie, K., Maeda, Y., Kojima, K.
PDB entry 9uc3: Crystal structure of voltage-gated sodium channel NavAb N49K/S178G mutant
Classification: MEMBRANE PROTEIN
Source organism: Aliarcobacter butzleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2025-04-03
Authors: Irie, K., Maeda, Y., Kojima, K.
PDB entry 9uc4: Crystal structure of voltage-gated sodium channel NavAb N49K/S178T/T206A mutant
Classification: MEMBRANE PROTEIN
Source organism: Aliarcobacter butzleri
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2025-04-03
Authors: Irie, K., Maeda, Y., Kojima, K.
PDB entry 9uc5: Mini-protein binder of N-terminal domain of nucleocapsid protein of SARS-CoV2
Classification: DE NOVO PROTEIN
Source organism: unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-03
Authors: Khakerwala, Z., Kumar, A., Makde, R.D.
PDB entry 9uc6: Cryo-EM structure of the Lhcp trimer from Ostreococcus tauri at 1.94 angstrom resolution
Classification: PHOTOSYNTHESIS
Source organism: Ostreococcus tauri
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.94 Å
Deposited: 2025-04-03
Authors: Seki, S., Kubota, M., Ishii, A., Kim, E., Tanaka, H., Miyata, T., Namba, K., Kurisu, G., Minagawa, J., Fujii, R.
PDB entry 9uc8: structure of human KCNQ1-KCNE1-CaM complex with PIP2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2025-04-03
Authors: Hou, P.P., Zhang, J., Wan, S.Y., Cheng, X.Y., Zhong, L., Hu, B.
PDB entry 9uce: Crystal structure of glycosyltransferase UGT73K1 in complex with UDP
Classification: TRANSFERASE
Source organism: Medicago truncatula
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-04-04
Authors: Zhu, J.S., Zhang, Y.
PDB entry 9ucg: A Fab structure with a covalent bond
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2025-04-04
Authors: Makabe, K., Nakanishi, T.
PDB entry 9uch: Crystal Structure of adenine-sulfotransferase from Bos Taurus
Classification: TRANSFERASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.39 Å
Deposited: 2025-04-04
Authors: Gu, S.M.
PDB entry 9uci: Crystal structure of adenine-sulfotransferase from Bos Taurus
Classification: TRANSFERASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2025-04-04
Authors: Gu, S.M.
PDB entry 9ucl: CryoEM structure of IgV domain of human Nectin-4 with Trimbody
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; synthetic construct; Thermotoga maritima MSB8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2025-04-04
Authors: Song, J.Y., Wang, W.
PDB entry 9ucm: Cryo-EM structure of the human G6P transporter SLC37A2 in the apo state with a symmetric ER luminal-open conformation.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-04
Authors: Sun, L., Liu, X., Lai, Q.
PDB entry 9ucn: Monomer of SARS-CoV-2 nsp4CTD
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2025-04-04
Authors: Meng, L., Pei, K., Tang, C.
PDB entry 9uco: Cryo-EM structure of ADGRE1-beta arrestin1-scFv30 complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2025-04-04
Authors: Zhong, Y.N.
PDB entry 9ucp: cryo-EM structure of M1 muscarinic acetylcholine receptor-alpha5 helix of G11 protein complex bound to iperoxo and nanobody Nb1B4
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2025-04-05
Authors: Zhang, X., Gao, K., Liu, X.
PDB entry 9uct: beta-glucosidase GH1-family
Classification: HYDROLASE
Source organism: Caldicellulosiruptor bescii DSM 6725
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-05
Authors: choi, J.
PDB entry 9ucw: anthranilate Phosphoribosyl transferase
Classification: TRANSFERASE
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2025-04-06
Authors: Choi, J.
PDB entry 9ud2: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrC-T225Y mutant from Vibrio cholerae reduced by NADH
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2025-04-06
Authors: Ishikawa-Fukuda, M., Kishikawa, J.
PDB entry 9ud3: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-T236Y mutant from Vibrio cholerae
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-04-06
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9ud4: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-T236Y mutant from Vibrio cholerae reduced by NADH
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2025-04-06
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9ud5: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, with bound korormicin A
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-04-06
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9ud6: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, upper state
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2025-04-06
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9ud7: Crystal structure of human glutaminyl cyclase in complex with Inhibitor CL7
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2025-04-06
Authors: Li, G.-B., Ning, X.-L., Meng, F.-B., Chen, Y.-T.
PDB entry 9ud8: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, middle state
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2025-04-06
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9ud9: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, in the absence of Na+, down state
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2025-04-07
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9uda: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-G141A mutant from Vibrio cholerae reduced by NADH, with bound korormicin A, stable state
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2025-04-06
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9udb: Crystal structure of MonCI in complex with farnesyl acetate
Classification: FLAVOPROTEIN
Source organism: Streptomyces virginiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-04-06
Authors: Deng, Y.M., Chen, X.
PDB entry 9udc: Cryo-EM Structure of SLC15A2 with NAD+ (Pose 1)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2025-04-06
Authors: Ning, Y., Ge, J.
PDB entry 9udd: Crystal structure of MonCI in complex with monoepoxidized farnesyl acetate
Classification: FLAVOPROTEIN
Source organism: Streptomyces virginiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-04-06
Authors: Xiao, H.L., Guan, Y.Z., Chen, X.
PDB entry 9ude: Crystal structure of MonCI in complex with diepoxidized farnesyl acetate
Classification: FLAVOPROTEIN
Source organism: Streptomyces virginiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2025-04-06
Authors: Xiao, H.L., Guan, Y.Z., Chen, X.
PDB entry 9udf: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase NqrB-G141A mutant from Vibrio cholerae reduced by NADH, with bound korormicin A, shifted state
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2025-04-06
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9udg: Cryo-EM structure of Na+-translocating NADH-ubiquinone oxidoreductase from Vibrio cholerae reduced by NADH, with bound aurachin D-42
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae O395
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2025-04-06
Authors: Ishikawa-Fukuda, M., Kishikawa, J., Kato, T., Murai, M.
PDB entry 9udh: bacteriophage lytic transglycosidase
Classification: TRANSFERASE
Source organism: Klebsiella variicola
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2025-04-06
Authors: choi, J.
PDB entry 9udi: Cryo-EM structure of the RdCas12n-sgRNA-DNA ternary complex, Conformation 2
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Rothia dentocariosa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2025-04-06
Authors: Fu, W., Ji, Q.
PDB entry 9udj: Crystal structure of PSD95 in complex with 4-dimethylaminophenol
Classification: STRUCTURAL PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2025-04-07
Authors: Li, H., Ouyang, Q., Zhu, J.
PDB entry 9udl: Cocrystal structure of human cytosolic phenylalanyl-tRNA synthetase and an inhibitor
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2025-04-07
Authors: Qiao, H., Hei, Z., Fang, P.
PDB entry 9udm: Cocrystal structure of human cytosolic phenylalanyl-tRNA synthetase and an inhibitor in the presence of ATP
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.33 Å
Deposited: 2025-04-07
Authors: Qiao, H., Hei, Z., Fang, P.
PDB entry 9udn: Single-chain Fv antibody of F8
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2025-04-07
Authors: Yoshida, M., Hanazono, Y., Numoto, N., Ito, N., Oda, M.
PDB entry 9udo: Single-chain Fv antibody of F8 complex with NNP-Cap
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2025-04-07
Authors: Yoshida, M., Hanazono, Y., Numoto, N., Ito, N., Oda, M.
PDB entry 9udp: Single-chain Fv antibody of B2
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2025-04-07
Authors: Yoshida, M., Hanazono, Y., Numoto, N., Ito, N., Oda, M.
PDB entry 9udq: Crystal structure of MPXV A35R in complex with a neutralizing antibody MA42
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.82 Å
Deposited: 2025-04-07
Authors: Sun, D., Zhang, N., Guo, Y.
PDB entry 9udr: Single-chain Fv antibody of B2 complex with NP-glycine
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.34 Å
Deposited: 2025-04-07
Authors: Yoshida, M., Hanazono, Y., Numoto, N., Ito, N., Oda, M.
PDB entry 9uds: Single-chain Fv antibody of C6
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2025-04-07
Authors: Yoshida, M., Hanazono, Y., Numoto, N., Ito, N., Oda, M.
PDB entry 9udt: Single-chain Fv antibody of C6 complex with NNP-Cap
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2025-04-07
Authors: Yoshida, M., Hanazono, Y., Numoto, N., Ito, N., Oda, M.
PDB entry 9udu: Single-chain Fv antibody of E11 complex with NNP-Cap
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2025-04-07
Authors: Yoshida, M., Hanazono, Y., Numoto, N., Ito, N., Oda, M.
PDB entry 9udv: Cryo-EM structure of the human G6P transporter SLC37A2 in the presence of G6P with an asymmetric conformation.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-04-07
Authors: Sun, L., Liu, X., Lai, Q.
PDB entry 9udw: Cryo-EM structure of the human G6P transporter SLC37A2 in the G6P bound state with a symmetric cytosolic-open conformation.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-04-07
Authors: Sun, L., Liu, X., Lai, Q.
PDB entry 9udx: Cryo-EM structure of the human G6P transporter SLC37A2 in the presence of G6P with a symmetric ER luminal-open conformation.
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-04-07
Authors: Sun, L., Liu, X., Lai, Q.
PDB entry 9udy: Crystal structure of recombinant mushroom Agaricus bisporus mannose-binding protein with a longer C-terminal region
Classification: SUGAR BINDING PROTEIN
Source organism: Agaricus bisporus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2025-04-07
Authors: Yoshida, H., Ismaya, W.T.
PDB entry 9udz: Crystal structure of recombinant mushroom Agaricus bisporus mannose-binding protein with a longer C-terminal region
Classification: SUGAR BINDING PROTEIN
Source organism: Agaricus bisporus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2025-04-07
Authors: Yoshida, H., Ismaya, W.T.
PDB entry 9ue0: Crystal structure of MPXV A35R in complex with a neutralizing antibody MA49
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-04-07
Authors: Sun, D., Zhang, N., Guo, Y.
PDB entry 9ue2: Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Lys181Ser/Trp185Gly/His280Ala with (S)-2-fluoro-3-(4-(trifluoromethyl)phenyl)propanoic acid
Classification: TRANSFERASE
Source organism: Rhodopseudomonas palustris CGA009
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3786 Å
Deposited: 2025-04-07
Authors: Huang, H.S., Zhang, Z.M.
PDB entry 9ue3: The structure of FIPV spike glycoprotein
Classification: PROTEIN BINDING
Source organism: Enterobacteria phage T6; Feline infectious peritonitis virus (strain 79-1146)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2025-04-08
Authors: Sun, J.Q., Niu, S.
PDB entry 9ue4: Serine Beta-Lactamase OXA-48 in Complex with MBL/SBL Inhibitor FB3-2
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.184 Å
Deposited: 2025-04-08
Authors: Li, G.-B., Wei, S.-Q.
PDB entry 9ue6: Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-04-08
Authors: Jin, X.H., Sun, L.
PDB entry 9ue7: Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.27 Å
Deposited: 2025-04-08
Authors: Jin, X.H., Sun, L.
PDB entry 9ue8: Crystal structure of MPXV A35R in complex with a neutralizing antibody BA345
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2025-04-08
Authors: Sun, D., Zhang, N., Guo, Y.
PDB entry 9ue9: Heptameric pore structure of Vibrio cholerae Cytolysin (VCC) embedded in lipid bilayer
Classification: TOXIN
Source organism: Vibrio cholerae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2025-04-08
Authors: Dutta, S., Chatterjee, A.
PDB entry 9uea: Prefusion structure of GX2012 spike glycoprotein
Classification: VIRAL PROTEIN
Source organism: BtTp-BetaCoV/GX2012
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2025-04-08
Authors: Wang, X., Lin, Z.
PDB entry 9ueb: Prefusion structure of 2014-422 spike glycoprotein
Classification: VIRAL PROTEIN
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2025-04-08
Authors: Wang, X., Lin, Z.
PDB entry 9ued: Cryo-EM structure of human TRPV3 in complex with sevoflurane determined in MSP2N2 nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2025-04-08
Authors: Lu, X., Yao, J.
PDB entry 9uee: Crystal structure of (R)-carbonyl reductase mutant I51L/Y61F/D147E from Candida Parapsilosis in complex with NAD
Classification: BIOSYNTHETIC PROTEIN
Source organism: Candida parapsilosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-04-08
Authors: Gu, J., Nie, Y.
PDB entry 9uei: Crystal structure of a PhGs rhamnosyltransferase UGT79G15 from Rehmannia glutinosa
Classification: TRANSFERASE
Source organism: Rehmannia glutinosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2025-04-08
Authors: Wei, H.L., Liu, W.D., Zhuang, Y.B., Liu, T.
PDB entry 9uel: Local refinement of NTD and RBD domains of SARS-CoV2 KP.3.1.1 spike protein
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2025-04-08
Authors: He, M.Z.
PDB entry 9uem: Metallo-Beta-Lactamase VIM-2 in Complex with MBL/SBL Inhibitor FB1-12
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-04-08
Authors: Li, G.-B., Wei, S.-Q.
PDB entry 9uen: Cryo-EM structure of coccolithophore photosystem I
Classification: PHOTOSYNTHESIS
Source organism: Emiliania huxleyi
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-08
Authors: Zhao, L.S., Sun, X.M., Li, K., Zhang, Y.Z., Liu, L.N.
PDB entry 9uep: The structure of FIPV RBD and cat APN complex
Classification: PROTEIN BINDING
Source organism: Feline infectious peritonitis virus (strain 79-1146); Felis catus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2025-04-09
Authors: Sun, J.Q.
PDB entry 9ueq: Cryo-EM structure of the CT-PT-BCCP domain of pyruvate carboxylase from Mycobacterium tuberculosis
Classification: LIGASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-09
Authors: Singh, A., Raza, M., Singh, S., Das, U.
PDB entry 9uer: AcrIE10-Cas7-IR complex
Classification: TRANSCRIPTION
Source organism: Klebsiella pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.64 Å
Deposited: 2025-04-09
Authors: Tsui, W.T., Ma, J.B.
PDB entry 9ues: Crystal structure of an inactive TKSP mutant in complex with the TKS propeptide
Classification: HYDROLASE
Source organism: Thermococcus kodakarensis KOD1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2025-04-09
Authors: Uehara, R., Nishizaki, S., Amesaka, H., Takano, K., Matsumura, H., Tanaka, S.-i.
PDB entry 9uet: Cryo-EM structure of human choline-phosphotransferase 1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2025-04-09
Authors: He, Y.L., Qian, H.W.
PDB entry 9uev: Structure of the SFTSV Gn head protein in complex with Nb261 and Nb318
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Severe fever with thrombocytopenia syndrome virus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2025-04-09
Authors: Liang, S.J., Lou, Z.Y., Wu, X.L.
PDB entry 9uew: Wild-type Bacillus megaterium Penicillin G Acylase with Non-Covalently Bound Phenylacetic Acid
Classification: STRUCTURAL PROTEIN
Source organism: Priestia megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2025-04-09
Authors: Kaewsasan, C., Rojviriya, C., Yuvaniyama, J.
PDB entry 9uf6: Cryo-EM structure of BA1-1-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-04-10
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9uf7: Crystal structure of a PhGs rhamnosyltransferase UGT79G15 from Rehmannia glutinosa in complex with UDP
Classification: TRANSFERASE
Source organism: Rehmannia glutinosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-04-10
Authors: Wei, H.L., Liu, W.D., Zhuang, Y.B., Liu, T.
PDB entry 9uf8: The cryo-EM structure of 26S proteasome-Midnolin complex in the MA state
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.32 Å
Deposited: 2025-04-10
Authors: Wang, H.Y., Xu, W.Q., Wei, C.C.
PDB entry 9uf9: CRYSTAL STRUCTURE OF PEPSTATIN A BOUND TO RHODOTORULA MUCILAGINOSA ASPARTIC PROTEASE RmuAP1
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Rhodotorula mucilaginosa; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2025-04-10
Authors: Zhang, Y.-H., Lin, C.-L., Meng, M.H.
PDB entry 9ufa: phosphatidylcholine head group bound alpha-hemolysin heptameric pore structure in the presence of RBC
Classification: TOXIN
Source organism: Staphylococcus aureus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-10
Authors: Dutta, S., Chatterjee, A., Roy, A.
PDB entry 9ufc: Structural of a glutamate cysteine ligase StGSH1 in Solanum tuberosum
Classification: PLANT PROTEIN
Source organism: Solanum tuberosum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2025-04-10
Authors: Zhao, H.B., Fan, S.L.
PDB entry 9ufd: Cryo-EM structure of BA12-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-04-10
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9ufe: Cryo-EM structure of the tubular mastigoneme (the central tube) from golden algae 2.17 angstrom resolution
Classification: CARBOHYDRATE
Source organism: Ochromonas danica
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.17 Å
Deposited: 2025-04-10
Authors: Huang, J., Tao, H., Chen, S., Cui, Y., Xu, Y., Yan, C., Yan, N.
PDB entry 9uff: Cryo-EM structure of BA21-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-04-10
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9ufg: Structure of a triple-helix region of human collagen type XII
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-10
Authors: Zhu, Y., Yang, X., Sun, F.
PDB entry 9ufi: Crystal structure of a PhGs rhamnosyltransferase UGT79G15 from Rehmannia glutinosa in complex with UDP and FSA
Classification: TRANSFERASE
Source organism: Rehmannia glutinosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2025-04-10
Authors: Wei, H.L., Liu, W.D., Zhuang, Y.B., Liu, T.
PDB entry 9ufl: Cryo-EM structure of BA22-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-04-10
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9ufn: Phage T4 hub in post-tail contraction, pre-genome-release state
Classification: VIRAL PROTEIN
Source organism: Escherichia phage T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-04-10
Authors: Shao, Q., Dong, J., Wang, A., Li, L., Zheng, Y., Li, H., Li, Y., Zhang, Q., Sun, L., Fokine, A., Rao, V.B., Tao, P., Fang, Q.
PDB entry 9ufq: Crystal structure of L-asparaginase from Thermococcus Sibiricus
Classification: HYDROLASE
Source organism: Thermococcus sibiricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-10
Authors: Matyuta, I.O., Varfolomeeva, L.A., Minyaev, M.E., Dumina, M., Zhdanov, D., Zhgun, A., Pokrovskaya, M., Aleksandrova, S., El'darov, M., Popov, V.O., Boyko, K.M.
PDB entry 9ufr: Crystal structure of L-asparaginase from Thermococcus Sibiricus double mutation D54G/T56Q
Classification: HYDROLASE
Source organism: Thermococcus sibiricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-04-10
Authors: Matyuta, I.O., Varfolomeeva, L.A., Minyaev, M.E., Dumina, M., Zhdanov, D., Zhgun, A., Pokrovskaya, M., Aleksandrova, S., El'darov, M., Popov, V.O., Boyko, K.M.
PDB entry 9ufs: Cryo-EM structure of BA23-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2025-04-10
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9uft: Ubiquinol Binding Site of Cytochrome bo3 from Acinetobacter baumannii
Classification: OXIDOREDUCTASE
Source organism: Acinetobacter baumannii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2025-04-10
Authors: Li, J., Zhu, J.P.
PDB entry 9ufx: Cryo-EM structure of HA11-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-04-10
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9ufy: Cryo-EM structure of HA21-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-04-10
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9ug0: Cryo-EM structure of HA31-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-04-10
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9ug1: Cryo-EM structure of HA32-bound alpha-synuclein fibril polymorph 6A6B
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-04-10
Authors: Zhang, S.Q., Liu, C., Li, D.
PDB entry 9ug2: Severed and capped actin fragment by two G1G3 domains of gelsolin
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens; Oryctolagus cuniculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2025-04-11
Authors: Kim, H., Jung, H.S.
PDB entry 9ug3: Structure of SARS-CoV-2 spike-CD147 complex at 3.75 Angstroms resolution
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.75 Å
Deposited: 2025-04-11
Authors: Zhang, S.J., Yang, Z.W., Lin, P., Bian, H.J., Zhu, P., Zhang, L., Chen, Z.N.
PDB entry 9ug4: Crystal structure of human galectin-3 in complex with N-galactoside 5
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2025-04-11
Authors: Konuma, T., Hoshi, K., Katsuyama, A., Ichikawa, S.
PDB entry 9ug5: Crystal structure of HA3 from Clostridium botulinum type B with alpha2,3-sialyllactose
Classification: TOXIN
Source organism: Clostridium botulinum B1 str. Okra
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-04-11
Authors: Amatsu, S., Kitadokoro, K.
PDB entry 9ug6: Crystal structure of HA3 from Clostridium botulinum type B with alpha2,6-sialyllactose
Classification: TOXIN
Source organism: Clostridium botulinum B1 str. Okra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2025-04-11
Authors: Amatsu, S., Kitadokoro, K.
PDB entry 9ug7: Structure of sulfonamide synthase SbzM from Actinokineospora mzabensis
Classification: OXYGEN BINDING
Source organism: Actinokineospora spheciospongiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2025-04-11
Authors: Zhu, Y., Mori, T., Abe, I.