LiteFold/PDB huggingface dataset:
PDB entry 9wag: Yeast-expressed polio type 1 expanded virus-like particles
Classification: VIRUS LIKE PARTICLE
Source organism: Poliovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2025-08-12
Authors: Hong, Q., Cong, Y.
PDB entry 9wah: Yeast-expressed polio type 1 stabilized virus-like particles
Classification: VIRUS LIKE PARTICLE
Source organism: Poliovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2025-08-12
Authors: Hong, Q., Cong, Y.
PDB entry 9wai: Yeast-expressed polio type 1 stablized virus-like particles with 3G10 Fab
Classification: VIRUS LIKE PARTICLE/IMMUNE SYSTEM
Source organism: Mus musculus; Poliovirus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-08-12
Authors: Hong, Q., Cong, Y.
PDB entry 9wal: Apoferritin (118% Super resolution Nyquist, 236% physical Nyquist) by PASR on Acquisition-time Super Resolution K3 data
Classification: METAL BINDING PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.67 Å
Deposited: 2025-08-12
Authors: Burton-Smith, R.N., Murata, K.
PDB entry 9wao: Structure of type II Abeta fibrils from 5xFAD mice
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-08-12
Authors: Cao, Q., Song, M.
PDB entry 9wap: Structure of Type II Abeta fibrils from AppNL-FPsen1P117L mice
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2025-08-12
Authors: Cao, Q., Song, M.
PDB entry 9was: Human mitochondrial ClpP in complex with LZL25
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.519 Å
Deposited: 2025-08-12
Authors: Chen, Z.-Y., Xiao, Y.-B., Sun, H.-Y.
PDB entry 9wat: Crystal structure of CYP204A3
Classification: OXIDOREDUCTASE
Source organism: Novosphingobium sp. 28-62-57
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-08-12
Authors: Zhang, Z.Y., Qu, X.D., Duan, B.R., Wei, G.Z., Tian, W.Y.
PDB entry 9wau: Crystal Structure of Chromobacterium violaceum Virulence Protein CteX
Classification: HYDROLASE
Source organism: Chromobacterium violaceum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-08-12
Authors: Shan, L., Xing, P.
PDB entry 9waw: SuperFi Cas9 - 20nt sgRNA - DNA ternary complex Class E
Classification: IMMUNE SYSTEM
Source organism: Streptococcus pyogenes; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2025-08-12
Authors: Zheng, R., Ma, L.J.
PDB entry 9wb3: HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-conformation1-composite-1
Classification: RNA BINDING PROTEIN/RNA/IMMUNE SYSTEM
Source organism: Homo sapiens; rhinovirus B14; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2025-08-13
Authors: Wang, Q.
PDB entry 9wb4: HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-conformation1-composite-2
Classification: RNA BINDING PROTEIN/RNA/IMMUNE SYSTEM
Source organism: Homo sapiens; rhinovirus B14; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2025-08-13
Authors: Wang, Q.
PDB entry 9wbd: Crystal structure of HLA-B*07:02 in complex with SPR epitope and Q04 TCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2025-08-13
Authors: Ping, Y., Daichao, W.
PDB entry 9wbe: Crystal structure of the CHS-CHIL complex
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2025-08-13
Authors: Li, J.X., zhang, P.
PDB entry 9wbg: Structure of human 26S proteasome complexed with midnolin, 19S proteasome with Ubl and Catch domain resolved
Classification: HYDROLASE
Source organism: Escherichia coli K-12; Homo sapiens; Pseudotamlana agarivorans
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.23 Å
Deposited: 2025-08-14
Authors: Zhu, C., Qin, L., Liang, L.
PDB entry 9wbt: Crystal Structure of Escherichia coli GroEL with Magnesium Ions and a Phosphorylated Serine Residue-3.2A
Classification: CHAPERONE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2025-08-15
Authors: Guo, Y., Zhang, L., Zheng, H., Li, J., Han, Q.
PDB entry 9wbz: The structure of NCP-motor-ARP module of ncBAF-nucleosome complex
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; unidentified; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-08-15
Authors: Chen, K.J., Chen, Z.C.
PDB entry 9wc0: The structure of NCP-RA module of ncBAF-nucleosome complex
Classification: GENE REGULATION/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2025-08-15
Authors: Chen, K.J., Chen, Z.C.
PDB entry 9wc1: The structure of ARP module in ncBAF complex
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-08-15
Authors: Chen, K.J., Chen, Z.C.
PDB entry 9wca: Closed state of A8 gpJ 713 central tail fiber
Classification: VIRAL PROTEIN
Source organism: Escherichia coli O157:H7 str. EDL933; Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2025-08-16
Authors: Deng, T.Y., Ge, X.F., Wang, J.W.
PDB entry 9wcb: Open state of A8 gpJ 713 central tail fiber with OmpC G17 from E. coli EDL933
Classification: VIRAL PROTEIN
Source organism: Escherichia coli O157:H7 str. EDL933; Escherichia phage Lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2025-08-16
Authors: Deng, T.Y., Ge, X.F., Wang, J.W.
PDB entry 9wd5: Cryo-EM structure of PSI-CpcL
Classification: PHOTOSYNTHESIS
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2025-08-18
Authors: Mao, Z.Y., Li, Z.H., Han, G.Y.
PDB entry 9wd7: GMPCPP-stabilizsd human alpha1A/beta3 microtubule
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.34 Å
Deposited: 2025-08-18
Authors: Ti, S.C., Luo, J.Y., Khoo, C.J.
PDB entry 9wd8: structure of human KCNQ1-KCNE3-CaM complex with two PIP2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2025-08-18
Authors: Cui, C., Sun, J.
PDB entry 9wd9: GMPCPP-stabilized human alpha1A/beta3 S239C microtubule
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.26 Å
Deposited: 2025-08-18
Authors: Ti, S.C., Luo, J.Y., Khoo, C.J.
PDB entry 9wda: Paclitaxel/GMPCPP-stabilized human alpha1A/beta3 microtubule
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2025-08-18
Authors: Ti, S.C., Luo, J.Y., Khoo, C.J.
PDB entry 9wdb: Paclitaxel/GMPCPP-stabilized human alpha1A/beta3 S239C microtubule
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2025-08-18
Authors: Ti, S.C., Luo, J.Y., Khoo, C.J.
PDB entry 9wdc: Cryo-EM structure of collagenase H (E416Q mutant) from Hathewaya histolytica bound to C-terminal region of the collagen-binding protein ColH (Pro-Pro-Gly)10
Classification: METAL BINDING PROTEIN
Source organism: Hathewaya histolytica; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.22 Å
Deposited: 2025-08-18
Authors: Oki, H., Kawahara, K.
PDB entry 9wdp: Cyro-EM structure of prefusion RSV fusion glycoprotein in complex with Ziresovir and motavizumab Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human respiratory syncytial virus A2; Mus musculus; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2025-08-19
Authors: Zhang, W., Yan, M.R., Zou, J.J., Peng, W.
PDB entry 9we4: N-methyltransferase 1 complexed with SAH and PDM in Chimonanthus praecox
Classification: PLANT PROTEIN
Source organism: Chimonanthus praecox
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2025-08-19
Authors: Zhang, A., Luo, Y., Hong, B.
PDB entry 9wey: Structure of HCMV UL33 in complex with human Gs protein
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Human betaherpesvirus 5; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-08-20
Authors: Tsutsumi, N., Suzuki, S., Nishikawa, K., Fujiyoshi, Y.
PDB entry 9wf1: PLP and 1-Boc-2-methyl-piperidin-5-one complex structure of an (R)-selective omega-transaminase from Ancylobacter lacus
Classification: TRANSFERASE
Source organism: Ancylobacter lacus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2025-08-20
Authors: Lin, S., Zhang, Y.
PDB entry 9wf2: Cryo-EM structure of GGCX-BGP complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2025-08-20
Authors: Qian, H.W., Zhang, W.J.
PDB entry 9wf3: Cryo-EM structure of GGCX-FIX complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2025-08-21
Authors: Qian, H.W., Zhang, W.J.
PDB entry 9wf6: Crystal Structure of Escherichia coli GroEL with Magnesium Ions and a Phosphorylated Serine Residue-3.0 A
Classification: CHAPERONE
Source organism: Escherichia coli BL21(DE3)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.99 Å
Deposited: 2025-08-21
Authors: Guo, Y., Zhang, L., Zheng, H., Li, J., Han, Q.
PDB entry 9wf9: Cryo-EM structure of GGCX-FX complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2025-08-21
Authors: Qian, H.W., Zhang, W.J.
PDB entry 9wfa: Cryo-EM structure of psXR
Classification: MEMBRANE PROTEIN
Source organism: Gloeobacter violaceus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2025-08-21
Authors: Murakoshi, S., Marin, M.C., Tanaka, T., Shihoya, W., Beja, O., Nureki, O.
PDB entry 9wfc: Cryo-EM structure of GGCX-MGP complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2025-08-21
Authors: Qian, H.W., Zhang, W.J.
PDB entry 9wfd: Cryo-EM structure of the Type II secretion system protein from Acidithiobacillus caldus
Classification: TOXIN
Source organism: Acidithiobacillus caldus (strain SM-1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.39 Å
Deposited: 2025-08-21
Authors: Liu, R.H., Zhang, K., Feng, Q.S., Dai, X., Zhang, X., Li, W., Bao, Z.P., Lin, W.F., Fu, Y., Li, Y.
PDB entry 9wff: Cryo-EM structure of the human Erlin2 oligomer
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.12 Å
Deposited: 2025-08-21
Authors: Qian, H.W., Jia, X.X.
PDB entry 9wfh: Carbohydrate-binding module 32 of LnbB from Bifidobacterium bifidum, ligand free form, multiple small-wedge data set
Classification: SUGAR BINDING PROTEIN
Source organism: Bifidobacterium bifidum JCM 1254
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-08-21
Authors: Zhang, X., Kashima, T., Fushinobu, S.
PDB entry 9wfi: A chimera FadR transcription factor containing wHTH of Rv0494 and the part other than wHTH of Escherichia coli FadR
Classification: TRANSCRIPTION
Source organism: Escherichia coli K-12; Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-08-21
Authors: Lu, L.N.
PDB entry 9wfl: Cryo-EM structure of GGCX-PRGP1 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.75 Å
Deposited: 2025-08-21
Authors: Qian, H.W., Chen, Q.Y.
PDB entry 9wfn: Cryo-EM structure of GGCX-proP2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2025-08-21
Authors: Qian, H.W., Chen, Q.Y.
PDB entry 9wfp: Structure of ABCC2(E1404Q) monomer in Arabidopsis thaliana in the DNP-GS bound state
Classification: PROTEIN TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2025-08-21
Authors: Sun, L., Liu, X., Qiu, X., Yang, Z., Gao, Y.
PDB entry 9wfq: Structure of the wild-type ABCC2 dimer in Arabidopsis thaliana in the apo state
Classification: PROTEIN TRANSPORT
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2025-08-21
Authors: Sun, L., Liu, X., Qiu, X., Yang, Z., Gao, Y.
PDB entry 9wg7: The structure of phycobilisome with a bicylindrical core from the cyanobacterium Synechococcus elongatus PCC 7942
Classification: ELECTRON TRANSPORT
Source organism: Synechococcus elongatus PCC 7942 = FACHB-805
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-08-23
Authors: Zheng, Z.G., Ma, C.Y., Wang, H.R., Wang, G.P., Dong, C.X., Gao, N., Zhao, J.D.
PDB entry 9wga: 2.2 ANGSTROMS RESOLUTION STRUCTURE ANALYSIS OF TWO REFINED N-ACETYLNEURAMINYLLACTOSE-WHEAT GERM AGGLUTININ ISOLECTIN COMPLEXES
Classification: LECTIN (AGGLUTININ)
Source organism: Triticum aestivum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1990-04-20
Authors: Wright, C.S.
PDB entry 9wgw: Crystal structure of human Haspin with ATP-mimicking inhibitor LJ-4827
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-08-25
Authors: Seo, J.H., Cheon, S.W.
PDB entry 9wgz: Tryptophan hydroxylase mutant - Y235S
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.857 Å
Deposited: 2025-08-25
Authors: Han, J., Liu, F., Rao, Z.M.
PDB entry 9wh0: Isomerase at 100K
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-08-25
Authors: Guven, O., DeMirci, H.
PDB entry 9wh2: Isomerase Structure at 280K
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-08-25
Authors: Guven, O., DeMirci, H.
PDB entry 9wh5: Isomerase at 120K
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-08-25
Authors: Guven, O., DeMirci, H.
PDB entry 9wh6: Isomerase at 300K
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-08-25
Authors: Guven, O., DeMirci, H.
PDB entry 9wh7: Crystal Structure of Duck STING bound to 2'3'-cGAMP
Classification: SIGNALING PROTEIN
Source organism: Anas platyrhynchos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2025-08-26
Authors: Zhao, Z.Z., Li, X.
PDB entry 9wh8: Crystal Structure of Human STING bound to diABZI3
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-08-26
Authors: Zhao, Z.Z., Li, X.
PDB entry 9wh9: Crystal Structure of Bovine STING bound to diABZI3
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2025-08-26
Authors: Zhao, Z.Z., Li, X.
PDB entry 9wha: Crystal Structure of Bovine STING bound to 2'3'-cGAMP
Classification: SIGNALING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2025-08-26
Authors: Zhao, Z.Z., Li, X.
PDB entry 9whd: Crystal Structure of a GH167 Enzyme from Wenyingzhuangia aestuarii
Classification: HYDROLASE
Source organism: Wenyingzhuangia aestuarii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-08-26
Authors: Chen, F., Chang, Y.
PDB entry 9whe: A novel, covalent and highly synthetically accessible SARS-CoV-2 Mpro chloroacetamide inhibitor
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2025-08-26
Authors: Zagribelnyy, B., Zhavoronkov, A.
PDB entry 9whf: Crystal Structure of Duck STING bound to diABZI3
Classification: SIGNALING PROTEIN
Source organism: Anas platyrhynchos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2025-08-26
Authors: Zhao, Z.Z., Li, X.
PDB entry 9whv: Cross-Stacking-Stabilized Intra-Locked RNA G-Quadruplex
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2025-08-27
Authors: Xiao, C.D., Wang, L.W., Wang, S.Y., Xu, Y.
PDB entry 9whw: N-methyltransferase 3 in Chimonanthus praecox
Classification: PLANT PROTEIN
Source organism: Chimonanthus praecox
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2025-08-27
Authors: Zhang, A., Luo, Y., Hong, B.
PDB entry 9whz: N-methyltransferase 1 complexed with SAH and MCM in Chimonanthus praecox
Classification: PLANT PROTEIN
Source organism: Chimonanthus praecox
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2025-08-27
Authors: Zhang, A., Luo, Y., Hong, B.
PDB entry 9wi0: cryo-EM structure of E.coli ArnA
Classification: ANTIBIOTIC
Source organism: Escherichia coli BW25113
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2025-08-27
Authors: Liu, X., Li, J.
PDB entry 9wip: Crystal structure of ADC-227 in the free form
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-08-29
Authors: Kawai, A., Doi, Y.
PDB entry 9wiq: Crystal structure of ADC-227 in the avibactam complex (50 mM for 4 hour)
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-08-29
Authors: Kawai, A., Doi, Y.
PDB entry 9wir: Crystal structure of ADC-227 in the avibactam complex (50 mM for 24 hour)
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-08-29
Authors: Kawai, A., Doi, Y.
PDB entry 9wis: Crystal structure of ADC-227 in the avibactam complex (100 mM for 4 hour)
Classification: HYDROLASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2025-08-29
Authors: Kawai, A., Doi, Y.
PDB entry 9wiw: Crystal structure of a Escherichia phage UPEC07 protein
Classification: ANTIMICROBIAL PROTEIN
Source organism: Escherichia phage T4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2025-08-29
Authors: Wang, H., Feng, Y., Wei, L.L.
PDB entry 9wiz: Structural Analysis of a Plant Glycoside Hydrolase Family 116 Glucosyl Ceramidase by Cryogenic Electron Microscopy (Cryo-EM)
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2025-08-30
Authors: Choknud, S., Rungsarityotin, W., Ounjai, P., Mo-mai, P., Wangkanont, K., Arthanareeswaran, K., Beagbandee, C., Ketudat-Cairns, J.R.
PDB entry 9wj7: N-methyltransferase 2-like complexed with SAH and NCM in Chimonanthus praecox
Classification: PLANT PROTEIN
Source organism: Chimonanthus praecox
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-08-30
Authors: Zhang, A., Luo, Y., Hong, B.
PDB entry 9wj8: N-methyltransferase 1 complexed with SAH and NCM in Chimonanthus praecox
Classification: PLANT PROTEIN
Source organism: Chimonanthus praecox
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-08-30
Authors: Zhang, A., Luo, Y., Hong, B.
PDB entry 9wj9: N-methyltransferase 2-like complexed with SAH and MDM in Chimonanthus praecox
Classification: PLANT PROTEIN
Source organism: Chimonanthus praecox
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-08-30
Authors: Zhang, A., Luo, Y., Hong, B.
PDB entry 9wja: N-methyltransferase 2-like complexed with SAH and PDM in Chimonanthus praecox
Classification: PLANT PROTEIN
Source organism: Chimonanthus praecox
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2025-08-30
Authors: Zhang, A., Luo, Y., Hong, B.
PDB entry 9wje: N-methyltransferase 1 complexed with SAH and MDM in Chimonanthus praecox
Classification: PLANT PROTEIN
Source organism: Chimonanthus praecox
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2025-08-30
Authors: Zhang, A., Luo, Y., Hong, B.
PDB entry 9wjh: Spiroindoline-bound human VAChT
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-08-31
Authors: Zhang, Z., Zhang, Y.
PDB entry 9wji: Alkylsulfone-bound human VAChT
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12; Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-08-31
Authors: Zhang, Z., Zhang, Y.
PDB entry 9wjr: Cryo-EM structure of the L. garvieae Man-PTS
Classification: MEMBRANE PROTEIN
Source organism: Lactococcus garvieae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2025-08-31
Authors: Wang, J.W.
PDB entry 9wju: Cryo-EM structure of the L. garvieae Man-PTS in complex with the bacteriocin GarQ
Classification: MEMBRANE PROTEIN
Source organism: Lactococcus garvieae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.81 Å
Deposited: 2025-08-31
Authors: Wang, J.W.
PDB entry 9wjw: Cryo-EM structure of the GarQ-lmYZ complex
Classification: MEMBRANE PROTEIN
Source organism: Lactococcus garvieae; Listeria monocytogenes
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2025-08-31
Authors: Wang, J.W.
PDB entry 9wks: Crystal structure of hen egg-white lysozyme determined in the commissioning of NanoTerasu MX-ES
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2025-09-01
Authors: Sakurai, K., Yamamoto, M., Fukuda, A., Nango, E., Yamada, Y.
PDB entry 9wku: Wild-type Menin complexed with JNJ-6617
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-09-01
Authors: Bijpuria, S., Mckeever, B.M., Mcgeehan, G.M.
PDB entry 9wkv: [M322I] Menin complexed with JNJ-6617
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-09-01
Authors: Bijpuria, S., Mckeever, B.M., Mcgeehan, G.M.
PDB entry 9wkw: Wild-type Menin complexed with DS-1594
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2025-09-01
Authors: Bijpuria, S., Mckeever, B.M., Mcgeehan, G.M.
PDB entry 9wkx: [M322I] Menin complexed with DS-1594
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-09-01
Authors: Bijpuria, S., Mckeever, B.M., Mcgeehan, G.M.
PDB entry 9wlp: Crystal structure of monkeypox virus A30/H2 sub-complex at pH 6.8
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-09-02
Authors: Lin, S., Jia, X.H., Lu, G.W.
PDB entry 9wlr: Cryo-EM structure of human papillomavirus type 45
Classification: VIRAL PROTEIN
Source organism: human papillomavirus 45
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2025-09-02
Authors: Jiang, Y., Sun, H., Zheng, Q., Li, S.
PDB entry 9wlv: The Crystal Structure of Alpha-Beta-fold_hydrolase from Microlunatus sagamiharensis.
Classification: HYDROLASE
Source organism: Microlunatus sagamiharensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-09-02
Authors: Huang, J., Smith, S., Wang, Q., Bao, X.
PDB entry 9wm8: The crystal structure of AstaP-pink1 from a microalga
Classification: LIPID BINDING PROTEIN
Source organism: Scenedesmaceae sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-09-03
Authors: Shomura, Y., Kawasaki, S.
PDB entry 9wma: Crystal structure of a P450 BM3 heme domain mutant
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium (strain NBRC 15308)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2025-09-03
Authors: Liu, Z.W., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9wmb: crystal structure of a P450 BM3 heme domain mutant in complex with Zearalenone
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium (strain NBRC 15308)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-09-03
Authors: Liu, Z.W., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9wmc: Crystal structure of a P450 BM3 heme domain mutant in complex with Alpha-Zearalanol
Classification: OXIDOREDUCTASE
Source organism: Priestia megaterium (strain NBRC 15308)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2025-09-03
Authors: Liu, Z.W., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9wmi: PsdAB dimer(LMNG)
Classification: TRANSPORT PROTEIN
Source organism: Bacillus sp. TSA-4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2025-09-03
Authors: He, Y.T., Fan, W.J., Luo, M.
PDB entry 9wml: Structural mechanism of substrate binding of the human Proline Transporter
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2025-09-03
Authors: Zhou, Y., Wu, J.X., Wang, J.Q., Wang, N.Q.
PDB entry 9wmm: Structure of the cholesterol-bound human proline transporter purified in DDM/CHS buffer
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-09-03
Authors: Wu, J.X., Zhou, Y., Wang, N.Q., Wang, J.Q.
PDB entry 9wmn: Structure of the apo-state human proline transporter purified in DDM/CHS buffer
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2025-09-03
Authors: Wu, J.X., Zhou, Y., Wang, J.Q., Wang, N.Q.
PDB entry 9wmo: Structure of the apo-state human proline transporter purified in DDM buffer
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2025-09-03
Authors: Wu, J.X., Zhou, Y., Wang, N.Q., Wang, J.Q.
PDB entry 9wmp: Structure of the cholesterol-bound human proline transporter purified in DDM buffer
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2025-09-03
Authors: Wu, J.X., Zhou, Y., Wang, N.Q., Wang, J.Q.
PDB entry 9wms: Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type B)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii GS115; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-09-03
Authors: Kujirai, T., Ehara, H., Ito, T., Henmi, M., Sekine, S., Kurumizaka, H.
PDB entry 9wmt: Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, type A)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii GS115; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2025-09-03
Authors: Kujirai, T., Ehara, H., Ito, T., Henmi, M., Sekine, S., Kurumizaka, H.
PDB entry 9wmu: Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type A)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii (strain GS115 / ATCC 20864); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.28 Å
Deposited: 2025-09-03
Authors: Kujirai, T., Ehara, H., Ito, T., Henmi, M., Sekine, S., Kurumizaka, H.
PDB entry 9wmv: Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp130, type B)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii GS115; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.66 Å
Deposited: 2025-09-03
Authors: Kujirai, T., Ehara, H., Ito, T., Henmi, M., Sekine, S., Kurumizaka, H.
PDB entry 9wmw: Co-transcriptional histone H3K36 methylation complex containing RNA polymerase II elongation complex, Set2, and the upstream nucleosome. (temp115, FACT-hexamer)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii GS115; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2025-09-03
Authors: Kujirai, T., Ehara, H., Ito, T., Henmi, M., Sekine, S., Kurumizaka, H.
PDB entry 9wn0: Crystal structure of phospholipase A2
Classification: LIPID BINDING PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-09-04
Authors: Zhu, D.
PDB entry 9wn1: PhospholipaseA2 with a ligand
Classification: LIPID BINDING PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2025-09-04
Authors: Zhu, D., Wang, Q.
PDB entry 9wn9: Wild-type Menin complexed with SUMITOMO
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-09-04
Authors: Bijpuria, S., Mckeever, B.M., Mcgeehan, G.M.
PDB entry 9wna: [M322I] Menin complexed with SUMITOMO
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-09-04
Authors: Bijpuria, S., Mckeever, B.M., Mcgeehan, G.M.
PDB entry 9wni: Wild-type Menin complexed with KO-539
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-09-04
Authors: Bijpuria, S., Mckeever, B.M., Mcgeehan, G.M.
PDB entry 9wnj: [M322I] Menin complexed with KO-539
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-09-04
Authors: Bijpuria, S., Mckeever, B.M., Mcgeehan, G.M.
PDB entry 9wno: Cryo-EM structure of Candida glabrata GPI mannosyltransferase I bound to Dol-P-Man
Classification: MEMBRANE PROTEIN
Source organism: Nakaseomyces glabratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2025-09-05
Authors: Sun, H., Wu, W.H., Yan, Z.F.
PDB entry 9wnq: Structure of E.coli ribosome in complex with an engineered arrest peptide
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2025-09-05
Authors: Sriramoju, M.K., Ko, T.P., Draczkowski, P., Hsu, S.T.D.
PDB entry 9wnr: Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2025-09-05
Authors: Sriramoju, M.K., Ko, T.P., Draczkowski, P., Hsu, S.T.D.
PDB entry 9wp3: The crystal structure of PDE2A complexed with inhibitor 13j
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.50184 Å
Deposited: 2025-09-08
Authors: Huang, Y.-Y., Luo, H.-B.
PDB entry 9wp5: The crystal structure of PDE4D with Pinoresinol Dimethyl Ether
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-09-08
Authors: Huang, Y.-Y., Luo, H.-B.
PDB entry 9wp6: The cryo-EM structure of Zea mays GLN1
Classification: PLANT PROTEIN
Source organism: Zea mays
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.98 Å
Deposited: 2025-09-08
Authors: Cheng, Y.Q., Wu, X.X., Zhang, Y., Huang, Y.C.
PDB entry 9wp9: Cryo-EM structure of the d18:1 S1P-bound S1PR3 and Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2025-09-08
Authors: Im, D., Asada, H., Iwata, S., Yamauchi, M., Hagiwara, M.
PDB entry 9wph: Complex of FMDV O/18074 and porcine-derived neutralizing monoclonal antibody pO18-10
Classification: VIRUS
Source organism: Foot-and-mouth disease virus O; Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.27 Å
Deposited: 2025-09-09
Authors: Wu, S., Zhu, Z., Lei, D.
PDB entry 9wpm: Cryo-EM structure of the apo-ConsOR5-Gs complex
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2025-09-09
Authors: Rong, N.K., Zhang, M.H., Yang, F., Sun, J.P.
PDB entry 9wpn: Crystal structure of the nitrilase superfamily protein CJ1056C from Campylobacter jejuni in space group P212121
Classification: HYDROLASE
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2025-09-09
Authors: Ahn, S.Y., Yoon, S.I.
PDB entry 9wpo: Crystal structure of the nitrilase superfamily protein CJ1056C from Campylobacter jejuni in space group P21
Classification: HYDROLASE
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-09-09
Authors: Ahn, S.Y., Yoon, S.I.
PDB entry 9wq1: Crystal structure of CNOT6L and YL-333P complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2025-09-10
Authors: Zhang, H.L., Yang, S.Y.
PDB entry 9wq2: Structure of 3TM-SAVED dimer bound to 2'3'-cGAMP
Classification: IMMUNE SYSTEM
Source organism: Bacillus thuringiensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2025-09-10
Authors: Gao, Y.N.
PDB entry 9wq3: Structure of 3TM-SAVED Filament bound to 2'3'-cGAMP
Classification: IMMUNE SYSTEM
Source organism: Bacillus thuringiensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2025-09-10
Authors: Gao, Y.N.
PDB entry 9wq4: Crystal structure of CNOT6L and Cpd1 complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-09-10
Authors: Zhang, H.L., Yang, S.Y.
PDB entry 9wqs: Crystal structure of Saccharomyces cerevisiae isoleucyl-tRNA synthetase in complex with reveromycin A and isoleucine
Classification: LIGASE
Source organism: Saccharomyces cerevisiae S288C
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-09-11
Authors: Chen, B., Yi, F., Zhou, H.
PDB entry 9wqt: Crystal structure of Saccharomyces cerevisiae isoleucyl-tRNA synthetase in complex with reveromycin A and isoleucine
Classification: LIGASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-09-11
Authors: Chen, B., Yi, F., Zhou, H.
PDB entry 9wqu: b-b' domain fragment of ER-60 (ERp57) under microgravity
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-09-11
Authors: Furubayashi, N., Shinohara, Y., Inaka, K., Kaito, S., Kobayashi, Y., Kamo, M., Urade, R.
PDB entry 9wqv: Cryo-EM structure of LH1-RC from Rhodovulum sulfidophilum
Classification: PHOTOSYNTHESIS
Source organism: Rhodovulum sulfidophilum DSM 1374
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.81 Å
Deposited: 2025-09-11
Authors: Yue, X.-Y., Wang, G.-L., Yu, L.-J.
PDB entry 9wqw: aminoacyl-tRNA-dependent peptide synthase, Sbb17
Classification: TRANSFERASE
Source organism: Streptomyces prunicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2025-09-11
Authors: Nakashima, Y., Sherif, H.A.M.A., Maruyama, C., Morita, H., Hamano, Y.
PDB entry 9wqx: aminoacyl-tRNA-dependent peptide synthase, Sbb17, complexed with streptothrisamine
Classification: TRANSFERASE
Source organism: Streptomyces prunicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-09-11
Authors: Nakashima, Y., Sherif, H.A.M.A., Maruyama, C., Morita, H., Hamano, Y.
PDB entry 9wqy: aminoacyl-tRNA-dependent peptide synthase, Sba18, complexed with streptothrisamine
Classification: TRANSFERASE
Source organism: Streptomyces sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-09-11
Authors: Nakashima, Y., Sherif, H.A.M.A., Maruyama, C., Morita, H., Hamano, Y.
PDB entry 9wqz: Ala/Ser-specific racemase in complex with PLP-D-Ala
Classification: ISOMERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2025-09-11
Authors: Sakuraba, H., Yoneda, K.
PDB entry 9wr1: Ala/Ser-specific racemase in complex with PLP-L-Ala
Classification: ISOMERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-09-11
Authors: Sakuraba, H., Yoneda, K.
PDB entry 9wrf: Amino acid racemase in complex with PLP-L-Ile
Classification: ISOMERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2025-09-12
Authors: Sakuraba, H., Yoneda, K.
PDB entry 9wrg: Amino acid racemase in complex with PLP-D-allo-Ile
Classification: ISOMERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2025-09-12
Authors: Sakuraba, H., Yoneda, K.
PDB entry 9wri: Crystal structure of CtBP2 in complex with G9a
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2025-09-12
Authors: Zhang, B., Jiang, J., Sun, W., Cai, Q., Chen, S.
PDB entry 9wrj: Crystal structure of CtBP1 in complex with PALI1
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-09-12
Authors: Zhang, B., Jiang, J., Sun, W., Cai, Q., Chen, S.
PDB entry 9wrn: Crystal structure of chimeric anti-Z-DNA Fab cZ22-Fab
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-09-12
Authors: Lee, C.C., Hsu, S.F., Wang, A.H.J.
PDB entry 9ws0: Crystal structure of cZ22-Fab in complex with left-handed d(CG)6 DNA
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.27 Å
Deposited: 2025-09-12
Authors: Lee, C.C., Hsu, S.F., Ko, T.P., Wang, A.H.J.
PDB entry 9ws8: Cryo-EM Structure of G6PT1 treated with G6P
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2025-09-12
Authors: Shuai, G., Xia, Y., Qian, W.
PDB entry 9wsc: Crystal structure of PcNLP485 effector protein from P.capsici
Classification: TOXIN
Source organism: Phytophthora capsici
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2025-09-12
Authors: Zhao, W.L., Zhang, X.G.
PDB entry 9wsf: Crystal structure of Sigma28/FlgM complex from Pseudomonas aeruginosa at 1.95 Angstrom resolution
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2025-09-13
Authors: Nln, S., Kumar, V., Sahoo, P.K., Jain, D.
PDB entry 9wsl: CryoEM structure of Western equine encephalitis virus California VLP in complex with VLDLR-LBD
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Western equine encephalitis virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2025-09-13
Authors: Liang, S.J., Lou, Z.Y.
PDB entry 9wsm: Cryo-EM structure of Sigma28-RNAP open promoter complex from Pseudomonas aeruginosa
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-09-13
Authors: Nln, S., Kumar, V., Sahoo, P.K., Kandiah, E., Jain, D.
PDB entry 9wsp: Cryo-EM structure of SARS CoV2 S protein with stabilising mutations
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.55 Å
Deposited: 2025-09-15
Authors: Srivastava, S., Mishra, S., Dutta, S., Varadarajan, R.
PDB entry 9wsq: Structure of dimeric mouse NLRP14-KDM2A-SKP1 complex
Classification: CYTOSOLIC PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2025-09-15
Authors: Liu, S., Jiao, H., Yan, L., Qi, Q., Chi, P., Lu, Y., Li, J.H., Li, J.L., Ju, S., Wang, X., Hu, H., Deng, D.
PDB entry 9wsr: Structure of mouse NLRP14-KDM2A-SKP1 complex
Classification: CYTOSOLIC PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2025-09-15
Authors: Liu, S., Jiao, H., Yan, L., Qi, Q., Chi, P., Lu, Y., Li, J.H., Li, J.L., Ju, S., Wang, X., Hu, H., Deng, D.
PDB entry 9wst: Cryo-EM structure of DAMGO-muOR-Gz-scFv16 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Oplophorus gracilirostris; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-09-15
Authors: Zhang, H., Wang, X., Xi, K., Shen, Q., Xue, J., Zhu, Y., Yang, G., Zhang, Y.
PDB entry 9wsv: Cryo-EM structure of DAMGO-muOR-arrestin-1-Fab30 complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-09-15
Authors: Zhang, H., Wang, X., Xi, K., Shen, Q., Xue, J., Zhu, Y., Yang, G., Zhang, Y.
PDB entry 9wsw: Cryo-EM structure of endomorphin-1-muOR-Gz-scFv16 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-09-15
Authors: Zhang, H., Wang, X., Xi, K., Shen, Q., Xue, J., Zhu, Y., Yang, G., Zhang, Y.
PDB entry 9wsx: Cryo-EM structure of endomorphin-1-muOR-arrestin2-Fab30 complex
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus; synthetic construct; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-09-15
Authors: Zhang, H., Wang, X., Xi, K., Shen, Q., Xue, J., Zhu, Y., Yang, G., Zhang, Y.
PDB entry 9wt2: Cryo-EM structure of Pi-free G6PT1 treated with GlcN6P
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2025-09-15
Authors: Shuai, G., Xia, Y., Qian, W.
PDB entry 9wt3: NRBF2 coiled coil domain promotes autophagy by strengthening association with Vps15 in the PI3KC3 complex
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-09-15
Authors: Li, N., Zhao, Y.
PDB entry 9wtd: Filament structure of human Reg3alpha
Classification: ANTIMICROBIAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2025-09-16
Authors: Cao, Q., Han, J.T.
PDB entry 9wts: Structure of the EpHTT from Echinacea purpurea
Classification: TRANSFERASE
Source organism: Echinacea purpurea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2025-09-16
Authors: Tang, D., Bao, H., Jiang, D., Huang, X.F.
PDB entry 9wu1: Amino acid racemase in complex with PLP-D-Phe
Classification: ISOMERASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-09-17
Authors: Sakuraba, H., Yoneda, K.
PDB entry 9wu2: Crystal structure of cZ22-Fab in complex with left-handed dC(GC)3 DNA
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-09-17
Authors: Lee, C.C., Hsu, S.F., Ko, T.P., Wang, A.H.J.
PDB entry 9wuf: Cryo-EM structure of Upx
Classification: ANTIVIRAL PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Bredeney
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2025-09-18
Authors: Zhang, H., Li, X.
PDB entry 9wv4: Crystal structure of human ZMYND8 MYND domain
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2025-09-19
Authors: Srivastava, D.K., Roy, S.
PDB entry 9wve: Crystal structure of HLA-A*11:01 in complex with KRAS G12A 10-mer peptide (VVVGAAGVGK)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-09-19
Authors: Jiali, Z., Linlin, Z.
PDB entry 9wvf: Crystal structure of HLA-A*11:01 in complex with KRAS G12S 10-mer peptide (VVVGASGVGK)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-09-19
Authors: Jiali, Z., Linlin, Z.
PDB entry 9wvh: Crystal structure of TONSL UBL domain
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2025-09-20
Authors: Karmakar, A., Roy, S.
PDB entry 9wvi: Crystal structure of TONSL UBL mutant - R934W
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2025-09-20
Authors: Karmakar, A., Roy, S.
PDB entry 9wvo: crystal structure of retro-aldolase RA95.5-8 mutant with a covalently bound cyclohexenone derivative
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2025-09-21
Authors: Sun, Y.S., Yang, Y.Y.
PDB entry 9wvu: Carbohydrate-bound structure of alpha-glucan phosphorylase from Crocosphaera subtropica ATCC 51142
Classification: TRANSFERASE
Source organism: Crocosphaera subtropica ATCC 51142
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-09-22
Authors: Suzuki, R., Ikuta, A., Suzuki, E.
PDB entry 9wvz: crystal structure of retro-aldolase T53L/K210H RA95.5-8 with a covalently bound cyclohexenone derivative
Classification: HYDROLASE
Source organism: Saccharolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2025-09-22
Authors: Sun, Y.S., Yang, Y.Y.
PDB entry 9wwe: Crystal structure of human tyrosylprotein sulfotransferase 2 (TPST2) in cation-bound state
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2025-09-23
Authors: Jin, M., Yang, J., Kim, H., Eom, S.H.
PDB entry 9wwf: Crystal structure of human tyrosylprotein sulfotransferase 2 (TPST2) in Mn2+-bound state
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-09-23
Authors: Jin, M., Yang, J., Kim, H., Eom, S.H.
PDB entry 9wwh: Crystal structure of IL-33 and antibody Tozorakimab fab binary complex
Classification: CYTOKINE/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.51 Å
Deposited: 2025-09-23
Authors: Wang, X.Q., Chen, J., Wang, Y.
PDB entry 9wwj: Structure of flagellar hook subunit FlgE D-I domain in Pseudomonas aeruginosa
Classification: MOTOR PROTEIN
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-09-23
Authors: Lu, G., You, Y.
PDB entry 9wx3: Structure of flagellar hook subunit FlgE D-II domain in Pseudomonas aeruginosa
Classification: MOTOR PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-09-24
Authors: Lu, G., You, Y.
PDB entry 9wx5: Crystal structure of frog M-ferritin E130A_M161E mutant
Classification: METAL TRANSPORT
Source organism: Aquarana catesbeiana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-09-24
Authors: Jagdev, M.K., Vasudevan, D.