LiteFold/PDB huggingface dataset:
PDB entry 8rw5: Symmetry expansion of dimeric transmembrane anti-sigma factor DdvA
Classification: SIGNALING PROTEIN
Source organism: Myxococcus xanthus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2024-02-02
Authors: Lopez-Alonso, J.P., Ochoa-Lizarralde, B., Tascon, I., Ubarretxena-Belandia, I.
PDB entry 8rw6: Human Brain and muscle ARNT-like 1 (BMAL1_HUMAN) PAS-B domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-02-02
Authors: Pu, H., Rastinejad, F.
PDB entry 8rw7: Crystal structure of the adenosine A2A receptor in complex with the synthetic photoswitch 'StilSwitch1
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-02-02
Authors: Glover, H., Standfuss, J.
PDB entry 8rw8: Brain and muscle ARNT-like 1 (BMAL1) PAS-B domain in-complex with core circadian modulator (CCM)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2024-02-02
Authors: Pu, H., Rastinejad, F.
PDB entry 8rw9: Domains 1 and 2 of Bacillus anthracis Sap S-layer in complex with Nb694
Classification: STRUCTURAL PROTEIN
Source organism: Bacillus anthracis; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-02-02
Authors: Sogues, A., Remaut, H.
PDB entry 8rwb: Crystal structure of ULBP6 in complex with a blocking antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.307 Å
Deposited: 2024-02-02
Authors: Bharill, S., Chen, I., Ivic, N., Bahrami Dizicheh, Z., Wu, Y., Doamekpor, S., Koenig, P., Fuh, G.
PDB entry 8rwc: Crystal structure of the adenosine A2A receptor in complex with the synthetic photoswitch 'StilSwitch2
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2024-02-02
Authors: Glover, H.
PDB entry 8rwd: Crystal structure of the adenosine A2A receptor in complex with the synthetic photoswitch 'StilSwitch3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-03
Authors: Glover, H.
PDB entry 8rwe: Crystal structure of the adenosine A2A receptor in complex with the synthetic photoswitch 'StilSwitch4
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-02-03
Authors: Glover, H.
PDB entry 8rwf: Domains 1 and 2 of Bacillus anthracis Sap S-layer in complex with Nb692
Classification: STRUCTURAL PROTEIN
Source organism: Bacillus anthracis; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2024-02-04
Authors: Sogues, A., Remaut, H.
PDB entry 8rwg: PAO1 wild-type ribosome, R, reference map
Classification: RIBOSOME
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2024-02-04
Authors: Mesa, P., Montoya, G.
PDB entry 8rwh: Dark structure of the human adenosine A2A receptor bound to synthetic photoswitch 'StilSwitch2' determined by serial synchrotron crystallography
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2024-02-04
Authors: Glover, H., Weinert, T.
PDB entry 8rwi: Steady state structure of the human adenosine A2A receptor bound to synthetic photoswitch 'StilSwitch2' determined by serial synchrotron crystallography
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-02-05
Authors: Glover, H., Weinert, T.
PDB entry 8rwj: cryoEM structure of Acs1 filament determined by FilamentID
Classification: CYTOSOLIC PROTEIN
Source organism: Saccharomyces cerevisiae SK1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-02-05
Authors: Hugener, J., Xu, J., Wettstein, R., Ioannidi, L., Velikov, D., Wollweber, F., Henggeler, A., Matos, J., Pilhofer, M.
PDB entry 8rwk: cryoEM structure of the central Ald4 filament determined by FilamentID
Classification: CYTOSOLIC PROTEIN
Source organism: Saccharomyces cerevisiae SK1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-02-05
Authors: Hugener, J., Xu, J., Wettstein, R., Ioannidi, L., Velikov, D., Wollweber, F., Henggeler, A., Matos, J., Pilhofer, M.
PDB entry 8rwl: Crystal structure of Methanopyrus kandleri malate dehydrogenase mutant 1
Classification: OXIDOREDUCTASE
Source organism: Methanopyrus kandleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-02-05
Authors: Coquille, S., Roche, J., Engilberge, S., Girard, E., Madern, D.
PDB entry 8rwm: Crystal structure of selenomethionine derivatized alpha keto acid C-methyl-transferases MrsA
Classification: TRANSFERASE
Source organism: Pseudomonas syringae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.644 Å
Deposited: 2024-02-05
Authors: Gerhardt, S., Andexer, J.N.
PDB entry 8rwn: CryoEM structure of the Hdr(ABC)2 subunits of the Elp-Hdr complex of Methanothermobacter marburgensis
Classification: OXIDOREDUCTASE
Source organism: Methanothermobacter marburgensis
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.85 Å
Deposited: 2024-02-05
Authors: San Segundo-Acosta, P., Murphy, B.J.
PDB entry 8rwo: KPC-2 G89D Mutant Apo Structure
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2024-02-05
Authors: Beer, M., Hinchliffe, P., Tooke, C.L., Spencer, J.
PDB entry 8rwp: KPC-2 G89D Mutant in Complex with Avibactam
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2024-02-05
Authors: Beer, M., Hinchliffe, P., Tooke, C.L., Spencer, J.
PDB entry 8rwq: KPC-2 G89D/E166Q Mutant Apo Structure
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2024-02-05
Authors: Beer, M., Hinchliffe, P., Tooke, C.L., Spencer, J.
PDB entry 8rwr: KPC-2 G89D/E166Q Mutant in Complex with Imipenem
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2024-02-05
Authors: Beer, M., Hinchliffe, P., Tooke, C.L., Spencer, J.
PDB entry 8rws: KPC-2 G89D/E166Q Mutant in Complex with Meropenem
Classification: ANTIMICROBIAL PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2024-02-05
Authors: Beer, M., Hinchliffe, P., Tooke, C.L., Spencer, J.
PDB entry 8rwu: ACDC domain of the AP2-I transcription factor from Plasmodium vivax
Classification: UNKNOWN FUNCTION
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2024-02-05
Authors: Nessler, S., Le Berre, M., Gallay Li de la Sierra, I.
PDB entry 8rwv: Human OCCM DNA licensing intermediate
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.68 Å
Deposited: 2024-02-05
Authors: Wells, J.N., Leber, V., Edwards, L.V., Allyjaun, S., Peach, M., Tomkins, J., Kefala-Stavridi, A., Faull, S.V., Aramayo, R., Pestana, C.M., Ranjha, L., Speck, C.
PDB entry 8rww: Crystal structure of native alpha-keto C-methyl transferase SgvM bound to ketoleucine
Classification: TRANSFERASE
Source organism: Streptomyces griseoviridis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-02-05
Authors: Gerhardt, S., Andexer, J.N.
PDB entry 8rwx: Steady state structure of the human adenosine A2A receptor bound to synthetic photoswitch 'StilSwitch3' determined by serial synchrotron crystallography
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2024-02-05
Authors: Glover, H., Bertrand, Q., Weinert, T.
PDB entry 8rwy: DtpB hexamer from Streptomyces lividans
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-02-05
Authors: Worrall, J.A.R., Chaplin, A.K., Allport, T.
PDB entry 8rwz: Open non-crosslinked structure Brd4BD2-MZ1-(NEDD8)-CRL2VHL
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-02-05
Authors: Crowe, C., Nakasone, M.A., Ciulli, A.
PDB entry 8rx0: (NEDD8)-CRL2VHL-MZ1-Brd4BD2-Ub(G76S, K48C)-UBE2R1(C93K, S138C, C191S, C223S)-Ub
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-02-05
Authors: Crowe, C., Nakasone, M.A., Ciulli, A.
PDB entry 8rx1: CryoEM structure of the gTuRC-CM1dim complex
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Spodoptera frugiperda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2024-02-06
Authors: Llorca, O., Serna, M., Gonzalez-Rodriguez, N.
PDB entry 8rx2: Domains 1 and 2 of Sap S-layer protein from Bacillus anthracis
Classification: STRUCTURAL PROTEIN
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2024-02-06
Authors: Sogues, A., Remaut, H.
PDB entry 8rx3: LTA4 hydrolase in complex with CTX-4430
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-06
Authors: Srinivas, H.
PDB entry 8rx4: Mycothione reductase from Mycobacterium xenopi in complex with co-factor FAD and redox co-factor NADP(H)
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium xenopi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-02-06
Authors: Oorts, L., Osipov, E.M., Beelen, S., Strelkov, S.V.
PDB entry 8rx5: Mycothione reductase from M. tuberculosis with FAD and NADPH
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2024-02-06
Authors: Oorts, L., Osipov, E.M., Beelen, S., Strelkov, S.V.
PDB entry 8rx6: Mycothione reductase from Mycobacterium tuberculosis in complex with Respiri-1093
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2024-02-06
Authors: Oorts, L., Osipov, E.M., Beelen, S., Strelkov, S.V.
PDB entry 8rx7: LTA4 hydrolase in complex with compound2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-06
Authors: Srinivas, H.
PDB entry 8rx8: The structure of CML18 in complex with 4 Ca2+ ions
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2024-02-06
Authors: Daniel-Mozo, M., Albert, A.
PDB entry 8rx9: LTA4 hydrolase in complex with compound3
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-02-06
Authors: Srinivas, H.
PDB entry 8rxa: ACDC domain of AP2-O5 from Plasmodium falciparum
Classification: UNKNOWN FUNCTION
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-02-06
Authors: Nessler, S., Le Berre, M., Gallay Li de la Sierra, I.
PDB entry 8rxb: Human UPF1 CH domain in complex with SMG6 peptide
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-02-06
Authors: Langer, L., Basquin, J., Conti, E.
PDB entry 8rxc: RadA helicase from Streptococcus pneumoniae coordinating dsDNA
Classification: DNA BINDING PROTEIN
Source organism: Streptococcus pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-02-06
Authors: Talachia Rosa, L., Fronzes, R.
PDB entry 8rxd: ComM helicase from Legionella pneumophila, coordinating dsDNA and AMP-PNP
Classification: DNA BINDING PROTEIN
Source organism: Legionella pneumophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2024-02-06
Authors: Talachia Rosa, L., Fronzes, R.
PDB entry 8rxe: NMR Solution Structure of Cold Shock Protein CspA
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: SOLUTION NMR
Deposited: 2024-02-07
Authors: Wanko, M., Dambon, C., Feller, G., Volkov, O.
PDB entry 8rxf: Crystal structure of S-SAD phased alpha-keto C-methyl transferase SgvM bound to ketoleucine
Classification: TRANSFERASE
Source organism: Streptomyces griseoviridis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2024-02-07
Authors: Gerhardt, S., Andexer, J.N.
PDB entry 8rxg: Crystal structure of alpha-keto C-methyl transferase SgvM bound to SAM
Classification: TRANSFERASE
Source organism: Streptomyces griseoviridis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.813 Å
Deposited: 2024-02-07
Authors: Gerhardt, S., Andexer, J.N.
PDB entry 8rxh: CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Classification: RIBOSOME
Source organism: Leishmania major strain Friedlin
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-02-07
Authors: Rajan, K.S., Yonath, A.
PDB entry 8rxi: Nitratidesulfovibrio vulgaris [FeFe] hydrogenase in Hinact state derivatized with krypton
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.477 Å
Deposited: 2024-02-07
Authors: Bikbaev, K., Harand, T., Scheuenstuhl, L., Carpentier, P., Span, I.
PDB entry 8rxj: Nitratidesulfovibrio vulgaris [FeFe] hydrogenase C178A mutant in Hinact-like state derivatized with krypton
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.507 Å
Deposited: 2024-02-07
Authors: Bikbaev, K., Harand, T., Scheuenstuhl, L., Carpentier, P., Span, I.
PDB entry 8rxk: ComM helicase from Legionella pneumophila, coordinating dsDNA and AMP-PNP
Classification: DNA BINDING PROTEIN
Source organism: Legionella pneumophila; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-02-07
Authors: Talachia Rosa, L., Fronzes, R.
PDB entry 8rxl: TEAD2 with an inhibitor
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2024-02-07
Authors: Guichou, J.F., Gelin, M., Allemand, F.
PDB entry 8rxm: Galectin-3 in complex with thiogalactoside derivative
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2024-02-07
Authors: Hakansson, M., Diehl, C., Peterson, K., Zetterberg, F., Nilsson, U.
PDB entry 8rxn: REFINEMENT OF RUBREDOXIN FROM DESULFOVIBRIO VULGARIS AT 1.0 ANGSTROMS WITH AND WITHOUT RESTRAINTS
Classification: ELECTRON TRANSPORT(IRON)
Source organism: Desulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 1991-08-26
Authors: Dauter, Z., Sieker, L., Wilson, K.
PDB entry 8rxo: ACDC domain of Plasmodium falciparum AP2-I transcription factor
Classification: UNKNOWN FUNCTION
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-02-07
Authors: Nessler, S., Le Berre, M., Li De La Sierra, I.
PDB entry 8rxp: TEAD2 with an inhibitor
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2024-02-07
Authors: Guichou, J.F., Gelin, M., Allemand, F.
PDB entry 8rxq: TEAD2 with an inhibitor
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2024-02-07
Authors: Guichou, J.F., Gelin, M., Allemand, F.
PDB entry 8rxr: Crystal structure of VPS34 in complex with inhibitor SB02024
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-02-07
Authors: Tresaugues, L., Yu, Y., Bogdan, M., Parpal, S., Silvander, C., Lindstrom, J., Simeon, J., Timson, M.J., Al-Hashimi, H., Smith, B.D., Flynn, D.L., Viklund, J., Martinsson, J., De Milito, A., Andersson, M.
PDB entry 8rxs: ComM helicase from Legionella pneumophila - Lon domain hexamer
Classification: DNA BINDING PROTEIN
Source organism: Legionella pneumophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-02-07
Authors: Talachia Rosa, L., Fronzes, R.
PDB entry 8rxt: ComM helicase hexamer in abscence o DNA
Classification: DNA BINDING PROTEIN
Source organism: Legionella pneumophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2024-02-07
Authors: Talachia Rosa, L., Fronzes, R.
PDB entry 8rxu: Crystal structure of octaheme nitrite reductase from Trichlorobacter ammonificans in space group P21
Classification: OXIDOREDUCTASE
Source organism: Trichlorobacter ammonificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.737 Å
Deposited: 2024-02-08
Authors: Polyakov, K.M., Safonova, T.N., Osipov, E., Popov, A.N., Tikhonova, T.V., Popov, V.O.
PDB entry 8rxv: TEAD2 with an inhibitor
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-08
Authors: Guichou, J.F., Gelin, M., Allemand, F.
PDB entry 8rxx: CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Classification: RIBOSOME
Source organism: Leishmania major strain Friedlin
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-02-08
Authors: Rajan, K.S., Yonath, A.
PDB entry 8ry0: CryoEM structure of M. smegmatis GMP reductase in complex with GMP at pH 6.6, extended conformation.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Pichova, I.
PDB entry 8ry1: CryoEM structure of M. smegmatis GMP reductase in complex with GMP at pH 6.6, compressed conformation.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Pichova, I.
PDB entry 8ry2: Crystal Structure of ANV419, a novel IL-2/anti-IL-2 antibody fusion protein
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-08
Authors: Rondeau, J.M., Wirth, E.
PDB entry 8ry3: CryoEM structure of M. smegmatis GMP reductase in complex with GMP and GTP at pH 6.6, extended conformation I.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Pichova, I.
PDB entry 8ry4: CryoEM structure of M. smegmatis GMP reductase in complex with GMP and GTP at pH 6.6, extended conformation II.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Pichova, I.
PDB entry 8ry5: CryoEM structure of M. smegmatis GMP reductase in complex with GMP and ATP at pH 6.6, compressed conformation.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Pichova, I.
PDB entry 8ry6: CryoEM structure of M. smegmatis GMP reductase apoform at pH 6.6, extended conformation I.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Pichova, I.
PDB entry 8ry7: CryoEM structure of M. smegmatis GMP reductase apoform at pH 6.6, extended conformation II.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Pichova, I.
PDB entry 8ry8: CryoEM structure of M. smegmatis GMP reductase apoform at pH 7.8, extended conformation I.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Svachova, H., Pichova, I.
PDB entry 8ry9: CryoEM structure of M. smegmatis GMP reductase apoform at pH 7.8, extended conformation II.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Svachova, H., Pichova, I.
PDB entry 8rya: CryoEM structure of M. smegmatis GMP reductase apoform at pH 7.8, tetramer.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Kouba, T., Svachova, H., Pichova, I.
PDB entry 8ryb: CryoEM structure of M. smegmatis GMP reductase in complex with GMP at pH 7.8, extended conformation.
Classification: OXIDOREDUCTASE
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2024-02-08
Authors: Dolezal, M., Tomas, K., Filimonenko, A., Pichova, I.
PDB entry 8ryc: TEAD2 with an inhibitor
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-02-08
Authors: Guichou, J.F., Gelin, M., Allemand, F.
PDB entry 8ryd: AzeJ in complex with SAH from Pseudomonas aeruginosa
Classification: LYASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-02-08
Authors: Klaubert, T.J., Gellner, J., Bernard, C., Effert, J., Lombard, C., Kaila, V.R.I., Bode, H.B., Li, Y., Groll, M.
PDB entry 8rye: AzeJ in complex with MTA and AZE from Pseudomonas aeruginosa (P2(1)2(1)2)
Classification: LYASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-02-08
Authors: Klaubert, T.J., Gellner, J., Bernard, C., Effert, J., Lombard, C., Kaila, V.R.I., Bode, H.B., Li, Y., Groll, M.
PDB entry 8ryf: AzeJ in complex with MTA and AZE from Pseudomonas aeruginosa (P4(2)22)
Classification: LYASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-02-08
Authors: Klaubert, T.J., Gellner, J., Bernard, C., Effert, J., Lombard, C., Kaila, V.R.I., Bode, H.B., Li, Y., Groll, M.
PDB entry 8ryg: VioH in complex with SAH from Cystobacter Violaceus
Classification: LYASE
Source organism: Cystobacter sp
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-02-08
Authors: Klaubert, T.J., Gellner, J., Bernard, C., Effert, J., Lombard, C., Kaila, V.R.I., Bode, H.B., Li, Y., Groll, M.
PDB entry 8ryh: Nitratidesulfovibrio vulgaris [FeFe]-hydrogenase [FeFe]-hydrogenase variant with both subunits linked by a linker peptide derived from a group A1 type [FeFe]-hydrogenase of Veillonella atypica
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.773 Å
Deposited: 2024-02-08
Authors: Bikbaev, K., Jaenecke, J., Winkler, M., Span, I.
PDB entry 8ryi: Metformin hydrolase from Aminobacter niigataensis MD1 with urea in the active site
Classification: METAL BINDING PROTEIN
Source organism: Aminobacter niigataensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-02-08
Authors: Fleming, J.R., Lutz, H., Bachmann, A., Mayans, O.
PDB entry 8ryj: High pH (8.0) nitrite-bound MSOX movie series dataset 3 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [2.07 MGy]
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2024-02-08
Authors: Rose, S.L., Ferroni, F.M., Horrell, S., Brondino, C.D., Eady, R.R., Jaho, S., Hough, M.A., Owen, A.L., Antonyuk, S.V., Hasnain, S.S.
PDB entry 8ryk: IL-1beta in complex with macrocyclic peptide hit
Classification: CYTOKINE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-02-09
Authors: Rondeau, J.-M., Lehmann, S.
PDB entry 8rym: Structure of S2 TCR in complex with HLA-A*03:01 bound to ELFSYLIEK peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2024-02-09
Authors: Karuppiah, V.
PDB entry 8ryn: Structure of S2 TCR in complex with HLA-A*11:01 bound to ELFSYLIEK peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2024-02-09
Authors: Karuppiah, V.
PDB entry 8ryo: Structure of S2-198 TCR in complex with HLA-A*03:01 bound to ELFSYLIEK peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-02-09
Authors: Karuppiah, V.
PDB entry 8ryp: Structure of S8 TCR in complex with HLA-A*03:01 bound to ELFSYLIEK peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-02-09
Authors: Karuppiah, V.
PDB entry 8ryq: Structure of S8-9F3 TCR in complex with HLA-A*11:01 bound to ELFSYLIEK peptide
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2024-02-09
Authors: Karuppiah, V.
PDB entry 8ryr: High pH (8.0) nitrite-bound MSOX movie series dataset 4 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [2.76 MGy]
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2024-02-09
Authors: Rose, S.L., Ferroni, F.M., Horrell, S., Brondino, C.D., Eady, R.R., Jaho, S., Hough, M.A., Owen, A.L., Antonyuk, S.V., Hasnain, S.S.
PDB entry 8rys: Human IL-1beta, unliganded
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2024-02-09
Authors: Rondeau, J.-M., Lehmann, S.
PDB entry 8ryt: Structural characterization of Thogoto Virus nucleoprotein provides insights into RNA encapsidation and assembly
Classification: VIRAL PROTEIN
Source organism: Thogotovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 18 Å
Deposited: 2024-02-09
Authors: Roske, Y., Mikirtumov, V., Daumke, O., Kudryashev, M., Dick, A.
PDB entry 8ryu: High pH (8.0) nitrite-bound MSOX movie series dataset 10 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [6.9 MGy]
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-02-09
Authors: Rose, S.L., Ferroni, F.M., Horrell, S., Brondino, C.D., Eady, R.R., Jaho, S., Hough, M.A., Owen, A.L., Antonyuk, S.V., Hasnain, S.S.
PDB entry 8ryv: MSOX movie series dataset 10 (11.5 MGy) for nitrite bound BrJNiR (Cu containing nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 at pH 8.
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-02-09
Authors: Rose, S.L., Ferroni, F.M., Horrell, S., Brondino, C.D., Eady, R.R., Jaho, S., Hough, M.A., Owen, A.L., Antonyuk, S.V., Hasnain, S.S.
PDB entry 8ryz: Structures of selenoneine synthase SenA from Variovorax paradoxus
Classification: STRUCTURAL PROTEIN
Source organism: Variovorax paradoxus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-02-11
Authors: Ma, Y.Y., Gao, Y., Xu, S.H.
PDB entry 8rz0: Synthetic immunogen RH5-34EM bound to monoclonal antibody R5.016
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2024-02-11
Authors: Farrell, B., Harrison, T., Higgins, M.K.
PDB entry 8rz1: Synthetic immunogen RH5-34EM bound to monoclonal antibody R5.034
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-02-11
Authors: Farrell, B., Higgins, M.K.
PDB entry 8rz2: PfRH5 bound to monoclonal antibody R5.034
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-02-11
Authors: Farrell, B., Higgins, M.K.
PDB entry 8rz3: Structures of Se- glycosyltransferase SenB from Variovorax paradoxus
Classification: STRUCTURAL PROTEIN
Source organism: Variovorax paradoxus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-02-12
Authors: Ma, Y.Y., Gao, Y., Xu, S.H.
PDB entry 8rz6: SeMet derivative structure of the condensation domain TomBC from the Tomaymycin non-ribosomal peptide synthetase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces regensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-02-12
Authors: Karanth, M., Schmelz, S., Kirkpatrick, J., Krausze, J., Scrima, A., Carlomagno, T.
PDB entry 8rz7: (CAG)2 DNA-bound MutSbeta in open form with kinked MSH2 clamp
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2024-02-12
Authors: Lee, J.-H., Thomsen, M., Daub, H., Steinbacher, S., Sztyler, A., Thieulin-Pardo, G., Neudegger, T., Plotnikov, N., Iyer, R.R., Wilkinson, H., Monteagudo, E., Felsenfeld, D.P., Haque, T., Finley, M., Dominguez, C., Vogt, T.F., Prasad, B.C.
PDB entry 8rz8: MutSbeta-ATPgS with straight MSH2 clamp
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-02-12
Authors: Lee, J.-H., Thomsen, M., Daub, H., Steinbacher, S., Sztyler, A., Thieulin-Pardo, G., Neudegger, T., Plotnikov, N., Iyer, R.R., Wilkinson, H., Monteagudo, E., Felsenfeld, D.P., Haque, T., Finley, M., Dominguez, C., Vogt, T.F., Prasad, B.C.
PDB entry 8rz9: MutSbeta-ATPgS with kinked MSH2 clamp
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-02-12
Authors: Lee, J.-H., Thomsen, M., Daub, H., Steinbacher, S., Sztyler, A., Thieulin-Pardo, G., Neudegger, T., Plotnikov, N., Iyer, R.R., Wilkinson, H., Monteagudo, E., Felsenfeld, D.P., Haque, T., Finley, M., Dominguez, C., Vogt, T.F., Prasad, B.C.
PDB entry 8rza: Ribonuclease W
Classification: HYDROLASE
Source organism: Escherichia coli; Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-02-12
Authors: Vayssieres, M., Blaud, M., Leulliot, N.
PDB entry 8rzb: IL-1beta in complex with covalent DEL hit
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.836 Å
Deposited: 2024-02-12
Authors: Rondeau, J.-M., Lehmann, S.
PDB entry 8rzc: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 11
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-02-12
Authors: Kalnins, G.
PDB entry 8rzd: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 9
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-02-12
Authors: Kalnins, G.
PDB entry 8rze: SARS-CoV-2 nsp16-nsp10 in complex with SAM derivative inhibitor 10
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-02-12
Authors: Kalnins, G.
PDB entry 8rzf: RNase W from Sulfolobus acidocaldarius
Classification: HYDROLASE
Source organism: Sulfolobus acidocaldarius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-02-12
Authors: Vayssieres, M., Blaud, M., Leulliot, N.
PDB entry 8rzg: ZgGH129 from Zobellia galactanivorans soaked with the product of the reaction ADG (3,6-anhydro-D-galactose).
Classification: HYDROLASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-02-12
Authors: Roret, T., Czjzek, M., Ficko-Blean, E.
PDB entry 8rzh: ZgGH129 from Zobellia galactanivorans in complex with the inhibitor AD-DGJ (3,6-anhydro-D-1-deoxygalactonojirimycin).
Classification: HYDROLASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-02-12
Authors: Roret, T., Czjzek, M., Ficko-Blean, E.
PDB entry 8rzi: ZgGH129 from Zobellia galactanivorans soaked with 1,2-diF-ADG (3,6-Anhydro-2-deoxy-2-fluoro-a-D-galactopyranosyl fluoride) resulting in a trapped glycosyl-enzyme intermediate.
Classification: HYDROLASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-02-12
Authors: Roret, T., Czjzek, M., Ficko-Blean, E.
PDB entry 8rzj: ZgGH129 from Zobellia galactanivorans in complex with the inhibitor ADG-IF (3,6-anhydro-D-galacto-isofagomine).
Classification: HYDROLASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-02-12
Authors: Roret, T., Czjzek, M., Ficko-Blean, E.
PDB entry 8rzk: The Michaelis complex of ZgGH129 D486N from Zobellia galactanivorans with neo-b/k-oligo-carrageenan tetrasaccharide (beta-kappa neo-oligo-carrageenan DP4).
Classification: HYDROLASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2024-02-12
Authors: Roret, T., Czjzek, M., Ficko-Blean, E.
PDB entry 8rzl: Sulfolobus acidocaldarius threads (0406) filament.
Classification: PROTEIN FIBRIL
Source organism: Sulfolobus acidocaldarius
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-02-12
Authors: Isupov, M.N., Gaines, M., McLaren, M., Daum, B.
PDB entry 8rzu: Structure of human SETD2 L1609P mutant in complex with SAM and H3K36M peptide
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-02-13
Authors: Mechaly, A.E., Michail, C., Haouz, A., Rodrigues-Lima, F.
PDB entry 8rzv: Structure of UP1 S4ES6E phosphomimetic mutant in complex with human telomeric repeat DNA
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2024-02-13
Authors: Dunnett, L., Prischi, F.
PDB entry 8rzw: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-02-13
Authors: Cleasby, A., Price, A.
PDB entry 8rzx: Solution structure of a parallel stranded G-quadruplex formed in ORAI1 promoter
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2024-02-13
Authors: Jana, J., Weisz, K.
PDB entry 8rzy: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2024-02-13
Authors: Cleasby, A., Price, A.
PDB entry 8rzz: Crystal structure of Renilla luciferase RLuc8-GFP BRET complex at pH 9.0 (space group P32)
Classification: HYDROLASE
Source organism: Renilla reniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.299 Å
Deposited: 2024-02-13
Authors: Marek, M., Smrckova, A.
PDB entry 8s00: CpKRS complexed with lysine and an inhibitor
Classification: LIGASE
Source organism: Cryptosporidium parvum Iowa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-02-13
Authors: Dawson, A., Baragana, B., Caldwell, N.
PDB entry 8s01: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-02-13
Authors: Cleasby, A., Price, A.
PDB entry 8s02: BzdNO-benzoyl-CoA complex
Classification: OXIDOREDUCTASE
Source organism: Azoarcus sp. CIB
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-02-13
Authors: Ermler, U., Boll, M., Fuchs, J., Demmer, U.
PDB entry 8s03: NMR solution structure of the CysD2 domain of MUC2
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-02-13
Authors: Recktenwald, C., Karlsson, B.G., Garcia-Bonnete, M.-J., Katona, G., Jensen, M., Lymer, R., Baeckstroem, M., Johansson, M.E.V., Hansson, G.C., Trillo-Muyo, S.
PDB entry 8s04: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-02-13
Authors: Cleasby, A., Price, A.
PDB entry 8s05: ArnAB complex an archaeal ortholog of the Sec23/24 core motif
Classification: PROTEIN BINDING
Source organism: Sulfolobus acidocaldarius DSM 639
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-02-13
Authors: Korf, L., Steinchen, W., Watad, M., Bezold, F., Vogt, M.S., Selbach, L., Penner, A., Tourte, M., Hepp, S., Albers, S.V., Essen, L.-O.
PDB entry 8s06: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-02-13
Authors: Cleasby, A., Price, A.
PDB entry 8s07: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-02-13
Authors: Cleasby, A., Price, A.
PDB entry 8s09: H. sapiens MCM2-7 double hexamer bound to double stranded DNA
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-02-13
Authors: Greiwe, J.F., Weissmann, F., Diffley, J.F.X., Costa, A.
PDB entry 8s0a: H. sapiens MCM2-7 hexamer bound to double stranded DNA
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-02-13
Authors: Greiwe, J.F., Weissmann, F., Diffley, J.F.X., Costa, A.
PDB entry 8s0b: H. sapiens MCM bound to double stranded DNA and ORC6 as part of the MCM-ORC complex
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-02-13
Authors: Greiwe, J.F., Weissmann, F., Diffley, J.F.X., Costa, A.
PDB entry 8s0c: H. sapiens ORC1-5 bound to double stranded DNA as part of the MCM-ORC complex
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-02-13
Authors: Greiwe, J.F., Weissmann, F., Diffley, J.F.X., Costa, A.
PDB entry 8s0d: H. sapiens MCM bound to double stranded DNA and ORC1-6
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-02-13
Authors: Greiwe, J.F., Weissmann, F., Diffley, J.F.X., Costa, A.
PDB entry 8s0e: H. sapiens OCCM bound to double stranded DNA
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-02-13
Authors: Greiwe, J.F., Weissmann, F., Diffley, J.F.X., Costa, A.
PDB entry 8s0f: H. sapiens OC1M bound to double stranded DNA
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-02-13
Authors: Greiwe, J.F., Weissmann, F., Diffley, J.F.X., Costa, A.
PDB entry 8s0g: Crystal structure of Renilla reniformis luciferase-GFP BRET complex
Classification: HYDROLASE
Source organism: Renilla reniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.378 Å
Deposited: 2024-02-14
Authors: Marek, M.
PDB entry 8s0h: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-02-14
Authors: Cleasby, A., Price, A.
PDB entry 8s0i: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.929 Å
Deposited: 2024-02-14
Authors: Cleasby, A., Price, A.
PDB entry 8s0j: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2024-02-14
Authors: Cleasby, A., Price, A.
PDB entry 8s0k: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2024-02-14
Authors: Cleasby, A., Price, A.
PDB entry 8s0l: Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07
Classification: PROTEASE/NANOBODY INHIBITOR
Source organism: Homo sapiens; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-02-14
Authors: Duquerroy, S., Fernandez, I., Rey, F.
PDB entry 8s0m: Crystal structure of the HKU1 receptor binding domain in complex with TMPRSS2 and the nanobody A01
Classification: VIRAL PROTEIN/RECEPTOR
Source organism: Homo sapiens; Human coronavirus HKU1 (isolate N5); Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å
Deposited: 2024-02-14
Authors: Duquerroy, S., Fernandez, I., Rey, F.
PDB entry 8s0n: Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07
Classification: PROTEASE/NANOBODY INHIBITOR
Source organism: Homo sapiens; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-02-14
Authors: Duquerroy, S., Fernandez, I., Rey, F.
PDB entry 8s0o: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.834 Å
Deposited: 2024-02-14
Authors: Cleasby, A., Price, A.
PDB entry 8s0p: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-02-14
Authors: Cleasby, A., Price, A.
PDB entry 8s0q: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.872 Å
Deposited: 2024-02-14
Authors: Cleasby, A., Price, A.
PDB entry 8s0r: Cryo-EM structure of CAK modified by covalent inhibitor SY-1365
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-02-14
Authors: Feng, J., Koh, A.F., Kotecha, A., Greber, B.J.
PDB entry 8s0s: A fragment-based inhibitor of SHP2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-02-14
Authors: Cleasby, A., Price, A.
PDB entry 8s0t: Cryo-EM structure of CAK in complex with SY-5609
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-02-14
Authors: Feng, J., Cronin, N.B., Marineau, J.J., Greber, B.J.
PDB entry 8s0u: Structure of the LytM domain of PrgK from E. faecalis
Classification: HYDROLASE
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-02-14
Authors: Sun, W.-S., Berntsson, R.P.-A.
PDB entry 8s0v: Crystal structure of Cryptosporidium parvum - Trypanosoma cruzi mutant lysyl tRNA synthetase in complex with inhibitor
Classification: LIGASE
Source organism: Cryptosporidium parvum Iowa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-02-14
Authors: Dawson, A., Wyllie, S.
PDB entry 8s0w: High pH (8.0) as-isolated MSOX movie series dataset 1 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [0.35 MGy]
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2024-02-14
Authors: Rose, S.L., Ferroni, F.M., Horrell, S., Brondino, C.D., Eady, R.R., Jaho, S., Hough, M.A., Owen, A.L., Antonyuk, S.V., Hasnain, S.S.
PDB entry 8s13: apo c-KIT-wt kinase domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-02-15
Authors: Teuber, A., Kleinboelting, S.B., Rauh, D., Mueller, M.P.
PDB entry 8s14: c-KIT kinase domain in complex with sunitinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-02-15
Authors: Teuber, A., Niggenaber, J., Landel, I., Mueller, M.P., Rauh, D.
PDB entry 8s15: c-KIT kinase domain in complex with nintedanib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-02-15
Authors: Teuber, A., Kleinboelting, S.B., Mueller, M.P., Rauh, D.
PDB entry 8s16: c-KIT kinase domain in complex with imatinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-15
Authors: Teuber, A., Mueller, M.P., Rauh, D.
PDB entry 8s17: c-KIT kinase domain in complex with ponatinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-02-15
Authors: Teuber, A., Mueller, M.P., Rauh, D.
PDB entry 8s18: c-KIT kinase domain in complex with S116836
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-02-15
Authors: Teuber, A., Mueller, M.P., Rauh, D.
PDB entry 8s19: c-KIT kinase domain in complex with staurosporine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-02-15
Authors: Teuber, A., Mueller, M.P., Rauh, D.
PDB entry 8s1a: c-KIT kinase domain in complex with crenolanib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-02-15
Authors: Teuber, A., Mueller, M.P., Rauh, D.
PDB entry 8s1b: c-KIT kinase domain in complex with IDRX-42 via soaking
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-02-15
Authors: Teuber, A., Mueller, M.P., Rauh, D.
PDB entry 8s1c: Intertwined dimer of the PTK6 SH3 domain
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-02-15
Authors: Oeguetcue, D., Berndt, S.
PDB entry 8s1j: Crystal structure of t-anethole oxygenase from Stenotrophomonas maltophilia
Classification: OXIDOREDUCTASE
Source organism: Stenotrophomonas maltophilia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-02-15
Authors: Rozeboom, H.J., Fraaije, M.W.
PDB entry 8s1k: Crystal Structure of human FABP4 in complex with 2-[1-(methoxymethyl)cyclopentyl]-6-pentyl-4-phenyl-3-(1H-tetrazol-5-yl)-5,6,7,8-tetrahydroquinoline
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2024-02-15
Authors: Ehler, A., Benz, J., Obst-Sander, U., Rudolph, M.G.
PDB entry 8s1l: Crystal structure of Renilla reniformis luciferase RLuc8-GFP BRET complex at pH 6.0
Classification: HYDROLASE
Source organism: Renilla reniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.398 Å
Deposited: 2024-02-15
Authors: Marek, M., Smrckova, A.