LiteFold/PDB huggingface dataset:
PDB entry 5y8n: Mycobacterium tuberculosis 3-Hydroxyisobutyrate dehydrogenase (MtHIBADH) + NAD + L-serine
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2017-08-21
Authors: Srikalaivani, R., Singh, A., Surolia, A., Vijayan, M.
PDB entry 5y8o: Mycobacterium tuberculosis 3-Hydroxyisobutyrate dehydrogenase (MtHIBADH) + NAD + 3-Hydroxy propionate (3-HP)
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2017-08-21
Authors: Srikalaivani, R., Singh, A., Surolia, A., Vijayan, M.
PDB entry 5y8p: Mycobacterium tuberculosis 3-Hydroxyisobutyrate dehydrogenase (MtHIBADH) + 3-Hydroxy propionate (3-HP)
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2017-08-21
Authors: Srikalaivani, R., Singh, A., Surolia, A., Vijayan, M.
PDB entry 5y8q: ZsYellow at pH 8.0
Classification: FLUORESCENT PROTEIN
Source organism: Zoanthus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2017-08-21
Authors: Bae, J.E., Kim, I.J., Nam, K.H.
PDB entry 5y8r: ZsYellow at pH 3.5
Classification: FLUORESCENT PROTEIN
Source organism: Zoanthus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-08-21
Authors: Bae, J.E., Kim, I.J., Nam, K.H.
PDB entry 5y8t: Crystal structure of Bacillus subtilis PadR in complex with p-coumaric acid
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-08-21
Authors: Park, S.C., Kwak, Y.M., Song, W.S., Hong, M., Yoon, S.I.
PDB entry 5y8u: Crystal structure of the C276S mutant of MAP2K7
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2017-08-21
Authors: Kinoshita, T.
PDB entry 5y8v: Crystal structure of GAS41
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2017-08-21
Authors: Wang, Y., Hao, Q.
PDB entry 5y8w: Crystal Structure Analysis of the BRD4
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2017-08-21
Authors: Xu, Y., Zhang, Y., Song, M., Wang, C.
PDB entry 5y8x: Crystal structure of Bacillus licheniformis Gamma glutamyl transpeptidase with Azaserine
Classification: TRANSFERASE
Source organism: Bacillus licheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2017-08-21
Authors: Kumari, S., Goel, M., Pal, R., Gupta, R.
PDB entry 5y8y: Crystal Structure Analysis of the BRD4
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2017-08-21
Authors: Xu, Y., Zhang, Y., Song, M., Wang, C.
PDB entry 5y8z: Crystal Structure Analysis of the BRD4
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2017-08-22
Authors: Xu, Y., Zhang, Y., Song, M., Wang, C.
PDB entry 5y90: MAP2K7 mutant -C218S
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2017-08-22
Authors: Kinoshita, T., Hashimoto, T., Sogabe, Y., Matsumoto, T., Sawa, M., Fukada, H.
PDB entry 5y91: The structure of the MHC class I molecule of bony fishes provides insights into the conserved nature of the antigen-presenting system
Classification: IMMUNE SYSTEM
Source organism: Ctenopharyngodon idella; Spring viraemia of carp virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2017-08-22
Authors: Zhaosan, C., Nianzhi, Z., Chun, X.
PDB entry 5y92: Crystal structure of ANXUR2 extracellular domain from Arabidopsis thaliana
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.004 Å
Deposited: 2017-08-22
Authors: Du, S., Xiao, J.Y.
PDB entry 5y93: Crystal Structure Analysis of the BRD4
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2017-08-22
Authors: Xu, Y., Zhang, Y., Song, M., Wang, C.
PDB entry 5y94: Crystal Structure Analysis of the BRD4
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-08-22
Authors: Xu, Y., Zhang, Y., Song, M., Wang, C.
PDB entry 5y95: Haddock model of mSIN3B PAH1 domain
Classification: GENE REGULATION
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2017-08-22
Authors: Kurita, J., Hirao, Y., Nishimura, Y.
PDB entry 5y96: Crystal structure of ANXUR1 extracellular domain from Arabidopsis thaliana
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-08-22
Authors: Du, S., Xiao, J.Y.
PDB entry 5y97: Crystal structure of snake gourd seed lectin in complex with lactose
Classification: PLANT PROTEIN
Source organism: Trichosanthes anguina
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2017-08-23
Authors: Chandran, T., Vijayan, M., Sivaji, N., Surolia, A.
PDB entry 5y98: Crystal structure of native unbound peptidyl tRNA hydrolase from Acinetobacter baumannii at 1.36 A resolution
Classification: HYDROLASE
Source organism: Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2017-08-23
Authors: Iqbal, N., Singh, N., Kaushik, S., Singh, P.K., Sharma, S., Singh, T.P.
PDB entry 5y9a: Crystal structure of the complex of peptidyl tRNA hydrolase with a phosphate ion at the substrate binding site and cytarabine at a new ligand binding site at 1.1 A resolution
Classification: HYDROLASE
Source organism: Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / CIP 70.34 / JCM 6841 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2017-08-23
Authors: Kaushik, S., Iqbal, N., Singh, N., Singh, P.K., Sharma, S., Singh, T.P.
PDB entry 5y9b: Crystal structure of Bacillus licheniformis Gamma glutamyl transpeptidase with DON
Classification: TRANSFERASE
Source organism: Bacillus licheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2017-08-24
Authors: Goel, M., Kumari, S., Pal, R., Gupta, R.
PDB entry 5y9c: Crystal structure of HPV58 pentamer in complex with the Fab fragment of antibody A12A3
Classification: STRUCTURAL PROTEIN/IMMUNE SYSTEM
Source organism: Human papillomavirus type 58; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.443 Å
Deposited: 2017-08-24
Authors: Li, S.W., Li, Z.H.
PDB entry 5y9d: Crystal structure of acyl-coA oxidase1 from Yarrowia lipolytica
Classification: OXIDOREDUCTASE
Source organism: Yarrowia lipolytica (strain CLIB 122 / E 150)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-08-24
Authors: Kim, S., Kim, K.-J.
PDB entry 5y9e: Crystal structure of HPV58 pentamer
Classification: STRUCTURAL PROTEIN
Source organism: Human papillomavirus type 58
Experimental method: X-RAY DIFFRACTION
Resolution: 2.042 Å
Deposited: 2017-08-24
Authors: Li, S.W., Li, Z.H.
PDB entry 5y9f: Crystal structure of HPV59 pentamer in complex with the Fab fragment of antibody 28F10
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human papillomavirus type 59; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2017-08-24
Authors: Li, S.W., Li, Z.H.
PDB entry 5y9g: Crystal structure of Salmonella SafD adhesin
Classification: CELL ADHESION
Source organism: Salmonella choleraesuis; Salmonella enteritidis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-08-25
Authors: Zeng, L.H., Zhang, L., Wang, P.R., Meng, G.
PDB entry 5y9h: Crystal structure of SafDAA-dsc complex
Classification: CELL ADHESION
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-08-25
Authors: Zeng, L.H., Zhang, L., Wang, P.R., Meng, G.
PDB entry 5y9i: Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with Co(II)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Methylacidiphilum infernorum (isolate V4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2017-08-25
Authors: Chung, H.S., Pemble, C.W., Joo, S.H.
PDB entry 5y9j: BAFF in complex with belimumab
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2017-08-25
Authors: Heo, Y.-S., Shin, W.
PDB entry 5y9k: Structure of the belimumab Fab fragment
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-08-25
Authors: Heo, Y.-S., Shin, W.
PDB entry 5y9l: Human kallikrein 7 in complex with 1,3,6-trisubstituted 1,4-diazepane-7-one
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2017-08-25
Authors: Sugawara, H.
PDB entry 5y9m: Crystal structure of CK2a2 form 3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.006 Å
Deposited: 2017-08-25
Authors: Tsuyuguchi, M., Kinoshita, T.
PDB entry 5y9n: Crystal structure of Pyrococcus furiosus PbaA (monoclinic form), an archaeal homolog of proteasome-assembly chaperone
Classification: CHAPERONE
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2017-08-26
Authors: Yagi-Utsumi, M., Sikdar, A., Kozai, T., Inoue, R., Sugiyama, M., Uchihashi, T., Satoh, T., Kato, K.
PDB entry 5y9o: The apo structure of Legionella pneumophila WipA
Classification: PEPTIDE BINDING PROTEIN
Source organism: Legionella pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.554 Å
Deposited: 2017-08-26
Authors: Xie, W., Jia, Q.
PDB entry 5y9p: Staphylococcus aureus RNase HII
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-08-26
Authors: Hang, T., Wu, M., Zhang, X.
PDB entry 5y9q: Crystal structure of the CcpE regulatory domain at 1.95 Angstrom from Staphylococcus aureus
Classification: TRANSCRIPTION
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.953 Å
Deposited: 2017-08-27
Authors: Chen, J., Wang, L., Shang, F., Xu, Y.
PDB entry 5y9r: Crystal structure of the oligomerization domain of NSP4 from rotavirus strain MF66
Classification: VIRAL PROTEIN
Source organism: Bovine rotavirus G10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-08-28
Authors: Suguna, K., Kumar, S.
PDB entry 5y9s: Crystal structure of VV2_1132, a LysR family transcriptional regulator
Classification: TRANSCRIPTION
Source organism: Vibrio vulnificus CMCP6
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2017-08-28
Authors: Jang, Y., Hong, S., Jo, I., Ahn, J., Ha, N.C.
PDB entry 5y9t: Crystal Structure of EGFR T790M mutant in complex with naquotinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2017-08-28
Authors: Mimasu, S., Tomimoto, Y., Maiko, I., Yasushi, A., Tatsuya, N.
PDB entry 5y9v: Crystal structure of diamondback moth ryanodine receptor N-terminal domain
Classification: TRANSPORT PROTEIN
Source organism: Plutella xylostella
Experimental method: X-RAY DIFFRACTION
Resolution: 2.841 Å
Deposited: 2017-08-28
Authors: Lin, L., Yuchi, Z.
PDB entry 5y9w: Crystal 1 for AtLURE1.2-AtPRK6LRR
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.847 Å
Deposited: 2017-08-28
Authors: Chai, J., Zhang, X.
PDB entry 5y9x: Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with alphaketoglutarate and coblat(II)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Methylacidiphilum infernorum (isolate V4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2017-08-29
Authors: Chung, H.S., Pemble, C.W., Joo, S.H., Raetz, C.R.
PDB entry 5y9y: Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with succinate and Co(II)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Methylacidiphilum infernorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.599 Å
Deposited: 2017-08-29
Authors: Chung, H.S., Pemble, C.W., Joo, S.H., Raetz, C.R.
PDB entry 5y9z: Crystal structure of rat hematopoietic prostaglandin D synthase
Classification: TRANSFERASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.09 Å
Deposited: 2017-08-29
Authors: Kamo, M., Furubayashi, N., Inaka, K., Tanaka, H., Aritake, K., Urade, Y.
PDB entry 5ya0: Crystal structure of LsrK and HPr complex
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.997 Å
Deposited: 2017-08-29
Authors: Ryu, K.S., Ha, J.H.
PDB entry 5ya1: crystal structure of LsrK-HPr complex with ATP
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2017-08-29
Authors: Ryu, K.S., Ha, J.H.
PDB entry 5ya2: Crystal structure of LsrK-HPr complex with ADP
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.701 Å
Deposited: 2017-08-30
Authors: Ryu, K.S., Ha, J.H.
PDB entry 5ya5: CRYSTAL STRUCTURE OF c-MET IN COMPLEX WITH NOVEL INHIBITOR
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2017-08-30
Authors: Liu, Q., Xu, Y.
PDB entry 5ya6: Crystal structure of archaeal flagellin FlaB1 from Methanocaldococcus jannaschii
Classification: STRUCTURAL PROTEIN
Source organism: Methanocaldococcus jannaschii DSM 2661
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-08-30
Authors: Meshcheryakov, V.A., Wolf, M.
PDB entry 5ya8: Crystal structure of scyllo-inositol dehydrogenase with L-glucose dehydrogenase activity complexed with myo-inositol
Classification: OXIDOREDUCTASE
Source organism: Paracoccus laeviglucosivorans Nakamura 2015
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-08-31
Authors: Fukano, K., Shimizu, T., Sasaki, Y., Nakamura, A., Yajima, S.
PDB entry 5yaa: Crystal structure of Marf1 NYN domain from Mus musculus
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2017-08-31
Authors: Yao, Q.Q., Wu, B.X., Ma, J.B.
PDB entry 5yab: Crystal structure of scyllo-inositol dehydrogenase with L-glucose dehydrogenase activity
Classification: OXIDOREDUCTASE
Source organism: Paracoccus laeviglucosivorans Nakamura 2015
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2017-08-31
Authors: Fukano, K., Shimizu, T., Sasaki, Y., Nakamura, A., Yajima, S.
PDB entry 5yac: Crystal structure of WT Trm5b from Pyrococcus abyssi
Classification: RNA BINDING PROTEIN
Source organism: Pyrococcus abyssi (strain GE5 / Orsay)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2017-08-31
Authors: Xie, W., Wu, J.
PDB entry 5yad: Crystal structure of Marf1 Lotus domain from Mus musculus
Classification: RNA BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2017-08-31
Authors: Yao, Q.Q., Wu, B.X., Ma, J.B.
PDB entry 5yae: Ferulic acid esterase from Streptomyces cinnamoneus at 2.4 A resolution
Classification: HYDROLASE
Source organism: Streptomyces cinnamoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-08-31
Authors: Tamura, H., Uraji, M., Mizohata, E., Ogawa, K., Inoue, T., Hatanaka, T.
PDB entry 5yag: Crystal structure of mosquito arylalkylamine N-Acetyltransferase like 5b/spermine N-Acetyltransferase
Classification: TRANSFERASE
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-08-31
Authors: Han, Q., Guan, H., Robinson, H., Li, J.
PDB entry 5yah: Crystal 2 for AtLURE1.2-AtPRK6LRR
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2017-08-31
Authors: Chai, J., Zhang, X.
PDB entry 5yak: The crystal structure of human IYD Thr239 mutant with ligand 3-Fluorotyrosine (F-Tyr)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-09-01
Authors: Hu, J.M., Rokita, S.E., Schlessman, J.
PDB entry 5yal: Ferulic acid esterase from Streptomyces cinnamoneus at 1.5 A resolution
Classification: HYDROLASE
Source organism: Streptomyces cinnamoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-09-01
Authors: Tamura, H., Uraji, M., Mizohata, E., Ogawa, K., Inoue, T., Hatanaka, T.
PDB entry 5yam: Solution structure of mice Met-CCL5/RANTES
Classification: CYTOKINE
Source organism: Mus musculus
Experimental method: SOLUTION NMR
Deposited: 2017-09-01
Authors: Chen, Y.-C., Chen, S.-P., Lee, Y.-Z., Sue, S.-C.
PDB entry 5yan: Deconstructing the Salt-Bridge Network of a Computationally Designed Collagen Heterotrimer
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2017-09-01
Authors: Fan, S.
PDB entry 5yao: The complex structure of SZ529 and expoxid
Classification: HYDROLASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.611 Å
Deposited: 2017-09-01
Authors: Lian, W., Sun, Z.T., Zhou, J.H., Reetz, M.T.
PDB entry 5yap: Crystal structure of scyllo-inositol dehydrogenase with L-glucose dehydrogenase activity complexed with L-glucono-1,5-lactone
Classification: OXIDOREDUCTASE
Source organism: Paracoccus laeviglucosivorans Nakamura 2015
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-09-01
Authors: Fukano, K., Shimizu, T., Sasaki, Y., Nakamura, A., Yajima, S.
PDB entry 5yaq: Crystal structure of scyllo-inositol dehydrogenase with L-glucose dehydrogenase activity complexed with scyllo-inosose
Classification: OXIDOREDUCTASE
Source organism: Paracoccus laeviglucosivorans Nakamura 2015
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2017-09-01
Authors: Fukano, K., Shimizu, T., Sasaki, Y., Nakamura, A., Yajima, S.
PDB entry 5yas: HYDROXYNITRILE LYASE COMPLEXED WITH HEXAFLUOROACETONE
Classification: LYASE
Source organism: Hevea brasiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1999-03-15
Authors: Zuegg, J., Wagner, U.G., Gugganig, M., Kratky, C.
PDB entry 5yat: Crystal structure of mitochondrial alcohol dehydrogenase isozyme III from Komagataella phaffii GS115
Classification: OXIDOREDUCTASE
Source organism: Komagataella phaffii (strain GS115 / ATCC 20864)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.745 Å
Deposited: 2017-09-01
Authors: Zhang, H.D., Li, Q.
PDB entry 5yav: Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.989 Å
Deposited: 2017-09-01
Authors: Bing, X., Yanlian, L., Danyan, C.
PDB entry 5yaw: Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.027 Å
Deposited: 2017-09-01
Authors: Bing, X., Yanlian, L., Danyan, C.
PDB entry 5yax: Crystal structure of a human neutralizing antibody bound to a HBV preS1 peptide
Classification: IMMUNE SYSTEM
Source organism: Hepatitis B virus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-09-02
Authors: Liu, X., Zheng, S., Ye, K., Sui, J.
PDB entry 5yay: Crystal structure of KANK1/KIF21A complex
Classification: PROTEIN BINDING
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2017-09-02
Authors: Wei, Z., Pan, W.
PDB entry 5yaz: Crystal structure of the ANKRD domain of KANK1
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-09-02
Authors: Wei, Z., Pan, W.
PDB entry 5yb0: Crystal Structure of Wild Type Phosphoserine aminotransferase (PSAT) from E. histolytica
Classification: TRANSFERASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2017-09-02
Authors: Singh, R.K., Gourinath, S.
PDB entry 5yb1: Structure and function of human serum albumin-metal agent complex
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.616 Å
Deposited: 2017-09-02
Authors: Yang, F., Wang, T., Wang, J., Gou, Y., Zhang, Z.L.
PDB entry 5yb2: Crystal structure of LP-11/N44
Classification: VIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 3.8 Å
Deposited: 2017-09-03
Authors: Zhang, X., Wang, X., He, Y.
PDB entry 5yb3: Crystal structure of HP23L/N36
Classification: VIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.043 Å
Deposited: 2017-09-03
Authors: Zhang, X., Wang, X., He, Y.
PDB entry 5yb4: Crystal structure of HP23LN36KR
Classification: VIRAL PROTEIN/INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-09-03
Authors: Zhang, X., Wang, X., He, Y.
PDB entry 5yb5: The complex crystal structure of VrEH2 mutant M263N with SNO
Classification: HYDROLASE
Source organism: Vigna radiata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.903 Å
Deposited: 2017-09-03
Authors: Li, F.L., Chen, F.F., Chen, Q., Kong, X.D., Yu, H.L., Xu, J.H.
PDB entry 5yb6: L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-lysine complex
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas sp. AIU 813
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-09-03
Authors: Im, D., Matsui, D., Arakawa, T., Isobe, K., Asano, Y., Fushinobu, S.
PDB entry 5yb7: L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-ornithine complex
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas sp. AIU 813
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-09-03
Authors: Im, D., Matsui, D., Arakawa, T., Isobe, K., Asano, Y., Fushinobu, S.
PDB entry 5yb8: L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-arginine complex
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas sp. AIU 813
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-09-03
Authors: Im, D., Matsui, D., Arakawa, T., Isobe, K., Asano, Y., Fushinobu, S.
PDB entry 5yb9: Crystal structure of a dimeric cyclophilin A from T.vaginalis
Classification: ISOMERASE
Source organism: Trichomonas vaginalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.276 Å
Deposited: 2017-09-04
Authors: Cho, C.C., Lin, M.H., Chou, C.C., Martin, T., Chen, C., Hsu, C.H.
PDB entry 5yba: Dimeric Cyclophilin from T.vaginalis in complex with Myb1 peptide
Classification: ISOMERASE
Source organism: Trichomonas vaginalis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.062 Å
Deposited: 2017-09-04
Authors: Cho, C.C., Lin, M.H., Martin, T., Chou, C.C., Chen, C., Hsu, C.H.
PDB entry 5ybb: Structural basis underlying complex assembly andconformational transition of the type I R-M system
Classification: DNA BINDING PROTEIN/DNA
Source organism: Caldanaerobacter subterraneus subsp. tengcongensis; Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2017-09-04
Authors: Liu, Y.P., Tang, Q., Zhang, J.Z., Tian, L.F., Gao, P., Yan, X.X.
PDB entry 5ybc: X-ray structure of native ETS-domain domain of Ergp55
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-09-04
Authors: Saxena, A.K., Gangwar, S.P.
PDB entry 5ybd: X-ray structure of ETS domain of Ergp55 in complex with E74DNA
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.769 Å
Deposited: 2017-09-04
Authors: Saxena, A.K., Gangwar, S.P.
PDB entry 5ybe: Structure of KANK1/KIF21A complex
Classification: CELL ADHESION
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.111 Å
Deposited: 2017-09-04
Authors: Weng, Z.F., Shang, Y., Yao, D.Q., Zhu, J.W., Zhang, R.G.
PDB entry 5ybf: Crystal structure of the GluA2o LBD in complex with glutamate and HBT1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-09-04
Authors: Sogabe, S., Igaki, S., Hirokawa, A., Zama, Y., Lane, W., Snell, G.
PDB entry 5ybg: Crystal structure of the GluA2o LBD in complex with glutamate and LY451395
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2017-09-04
Authors: Sogabe, S., Igaki, S., Hirokawa, A., Zama, Y., Lane, W., Snell, G.
PDB entry 5ybh: Structural of the highly conserved ATPase from type III secretion system of bacterial pathogens
Classification: HYDROLASE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-09-05
Authors: Mu, Z., Gao, X., Cui, S.
PDB entry 5ybi: Structure of the bacterial pathogens ATPase with substrate AMPPNP
Classification: HYDROLASE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.268 Å
Deposited: 2017-09-05
Authors: Mu, Z.X., Gao, X.P., Cui, S.
PDB entry 5ybj: Structure of apo KANK1 ankyrin domain
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.341 Å
Deposited: 2017-09-05
Authors: Guo, Q., Liao, S., Min, J., Xu, C., Structural Genomics Consortium (SGC)
PDB entry 5ybl: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AusE
Classification: OXIDOREDUCTASE
Source organism: Emericella nidulans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.108 Å
Deposited: 2017-09-05
Authors: Nakashima, Y., Senda, M.
PDB entry 5ybm: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA
Classification: OXIDOREDUCTASE
Source organism: Penicillium brasilianum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.115 Å
Deposited: 2017-09-05
Authors: Nakashima, Y., Senda, M.
PDB entry 5ybn: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA in complex with (alpha)ketoglutarate
Classification: OXIDOREDUCTASE
Source organism: Penicillium brasilianum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2017-09-05
Authors: Nakashima, Y., Senda, M.
PDB entry 5ybo: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA in complex with preaustinoid A1
Classification: OXIDOREDUCTASE
Source organism: Penicillium brasilianum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.204 Å
Deposited: 2017-09-05
Authors: Nakashima, Y., Senda, M.
PDB entry 5ybp: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with preaustinoid A1
Classification: OXIDOREDUCTASE
Source organism: Penicillium brasilianum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.312 Å
Deposited: 2017-09-05
Authors: Nakashima, Y., Senda, M.
PDB entry 5ybq: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with preaustinoid A2
Classification: OXIDOREDUCTASE
Source organism: Penicillium brasilianum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2017-09-05
Authors: Nakashima, Y., Senda, M.
PDB entry 5ybr: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with preaustinoid A3
Classification: OXIDOREDUCTASE
Source organism: Penicillium brasilianum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.261 Å
Deposited: 2017-09-05
Authors: Nakashima, Y., Senda, M.
PDB entry 5ybs: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S in complex with berkeleyone A
Classification: OXIDOREDUCTASE
Source organism: Penicillium brasilianum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-09-05
Authors: Nakashima, Y., Senda, M.
PDB entry 5ybt: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA-V150L/A232S/M241V in complex with berkeleyone A
Classification: OXIDOREDUCTASE
Source organism: Penicillium brasilianum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2017-09-05
Authors: Nakashima, Y., Senda, M.
PDB entry 5ybu: Structure of the KANK1 ankyrin domain in complex with KIF21A peptide
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2017-09-05
Authors: Guo, Q., Liao, S., Min, J., Xu, C., Structural Genomics Consortium (SGC)
PDB entry 5ybv: The structure of the KANK2 ankyrin domain with the KIF21A peptide
Classification: CELL ADHESION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2017-09-05
Authors: Guo, Q., Liao, S., Min, J., Xu, C., Structural Genomics Consortium (SGC)
PDB entry 5ybw: Crystal structure of pyridoxal 5'-phosphate-dependent aspartate racemase
Classification: ISOMERASE
Source organism: Scapharca broughtonii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-09-05
Authors: Mizobuchi, T., Nonaka, R., Yoshimura, M., Abe, K., Takahashi, S., Kera, Y., Goto, M.
PDB entry 5ybx: Crystal structure of the N-terminal domain of Bqt4 in S.pombe
Classification: DNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2017-09-05
Authors: Hu, C., Chen, Y.
PDB entry 5yby: Structure of human Gliomedin
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.429 Å
Deposited: 2017-09-05
Authors: Liu, H., Lin, Z., Xu, F.
PDB entry 5ybz: High resolution structure of complement C1q-like protein 3 C1q domain
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.711 Å
Deposited: 2017-09-05
Authors: Liu, H., Li, Z., Xu, F.
PDB entry 5yc0: Crystal structure of LP-46/N44
Classification: VIRAL PROTEIN/INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-09-05
Authors: Zhang, X., Wang, X., He, Y.
PDB entry 5yc1: TRAF4_GPIb complex
Classification: SIGNALING PROTEIN/PEPTIDE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.506 Å
Deposited: 2017-09-06
Authors: Park, H.H., Kim, C.M.
PDB entry 5yc2: Crystal structure of inner membrane protein Bqt4 in complex with telomeric protein Rap1
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.704 Å
Deposited: 2017-09-06
Authors: Chen, Y., Hu, C.
PDB entry 5yc3: Crystal structure of AL3 PHD finger bound to H3K4me2
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.601 Å
Deposited: 2017-09-06
Authors: Zhao, S., Zhang, B., Li, H.
PDB entry 5yc4: Crystal structure of AL3 PHD finger bound to H3K4me3
Classification: TRANSCRIPTION
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.697 Å
Deposited: 2017-09-06
Authors: Zhao, S., Zhang, B., Li, H.
PDB entry 5yc5: Crystal structure of human IgG-Fc in complex with aglycan and optimized Fc gamma receptor IIIa
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2017-09-06
Authors: Caaveiro, J.M.M., Tamura, H., Tsumoto, K., Kiyoshi, M.
PDB entry 5yc6: The crystal structure of uPA in complex with 4-Bromobenzylamirne at pH4.6
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2017-09-06
Authors: Jiang, L.G., Zhang, X., Huang, M.D.
PDB entry 5yc7: The crystal structure of uPA in complex with 4-Bromobenzylamirne at pH7.4
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-09-06
Authors: Jiang, L.G., Zhang, X., Huang, M.D.
PDB entry 5yc8: Crystal structure of rationally thermostabilized M2 muscarinic acetylcholine receptor bound with NMS (Hg-derivative)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-09-06
Authors: Suno, R., Maeda, S., Yasuda, S., Yamashita, K., Hirata, K., Horita, S., Tawaramoto, M.S., Tsujimoto, H., Murata, T., Kinoshita, M., Yamamoto, M., Kobilka, B.K., Iwata, S., Kobayashi, T.
PDB entry 5yc9: Crystal structure of a Pseudomonas aeruginosa transcriptional regulator
Classification: TRANSCRIPTION
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2017-09-07
Authors: Harikiran, R., Rohan, S.
PDB entry 5yca: Crystal structure of inner membrane protein Bqt4 in complex with LEM2
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2017-09-07
Authors: Chen, Y., Hu, C.
PDB entry 5ycb: Crystal structure of notothenia coriiceps adenylate kinase variant
Classification: TRANSFERASE
Source organism: Notothenia coriiceps
Experimental method: X-RAY DIFFRACTION
Resolution: 2.272 Å
Deposited: 2017-09-07
Authors: Bae, E., Kim, J., Moon, S.
PDB entry 5ycc: Crystal structure of Notothenia coriiceps adenylate kinase variant
Classification: TRANSFERASE
Source organism: Notothenia coriiceps
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-09-07
Authors: Bae, E., Kim, J., Moon, S.
PDB entry 5ycd: Crystal structure of Poecilia reticulata adenylate kinase
Classification: TRANSFERASE
Source organism: Poecilia reticulata
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-09-07
Authors: Bae, E., Kim, J., Moon, S.
PDB entry 5yce: Sperm whale myoglobin swMb
Classification: OXYGEN STORAGE
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 0.77 Å
Deposited: 2017-09-07
Authors: Isogai, Y., Imamura, H., Nakae, S., Sumi, T., Takahashi, K., Nakagawa, T., Tsuneshige, A., Shirai, T.
PDB entry 5ycf: Crystal structure of Xiphophorus maculatus adenylate kinase
Classification: TRANSFERASE
Source organism: Xiphophorus maculatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.938 Å
Deposited: 2017-09-07
Authors: Bae, E., Kim, J., Moon, S.
PDB entry 5ycg: Ancestral myoglobin aMbWp of Pakicetus relative
Classification: OXYGEN STORAGE
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-09-07
Authors: Isogai, Y., Imamura, H., Nakae, S., Sumi, T., Takahashi, K., Nakagawa, T., Tsuneshige, A., Shirai, T.
PDB entry 5ych: Ancestral myoglobin aMbWb of Basilosaurus relative (monophyly)
Classification: OXYGEN STORAGE
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.354 Å
Deposited: 2017-09-07
Authors: Isogai, Y., Imamura, H., Nakae, S., Sumi, T., Takahashi, K., Nakagawa, T., Tsuneshige, A., Shirai, T.
PDB entry 5yci: Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly)
Classification: OXYGEN STORAGE
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2017-09-07
Authors: Isogai, Y., Imamura, H., Nakae, S., Sumi, T., Takahashi, K., Nakagawa, T., Tsuneshige, A., Shirai, T.
PDB entry 5ycj: Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly) imidazole-ligand
Classification: OXYGEN STORAGE
Source organism: Physeter catodon
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2017-09-07
Authors: Isogai, Y., Imamura, H., Nakae, S., Sumi, T., Takahashi, K., Nakagawa, T., Tsuneshige, A., Shirai, T.
PDB entry 5yck: Crystal structure of a MATE family protein derived from Camelina sativa at 2.3 angstrom
Classification: TRANSPORT PROTEIN
Source organism: Camelina sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-09-07
Authors: Tanaka, Y., Tsukazaki, T., Iwaki, S.
PDB entry 5ycl: Crystal structure of HigBA complex from Shigella flexneri
Classification: STRUCTURAL PROTEIN
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 3.101 Å
Deposited: 2017-09-07
Authors: Youn, W.S., Seok, S.H., Seo, M.D.
PDB entry 5ycn: Human PPARgamma ligand binding domain complexed with Lobeglitazone
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2017-09-07
Authors: Jang, J.Y., Han, B.W.
PDB entry 5yco: Complex structure of PCNA with UHRF2
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.199 Å
Deposited: 2017-09-07
Authors: Wu, M., Chen, W., Hang, T., Wang, C., Zhang, X., Zang, J.
PDB entry 5ycp: Human PPARgamma ligand binding domain complexed with Rosiglitazone
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-09-07
Authors: Jang, J.Y., Han, B.W.
PDB entry 5ycq: Unique Specificity-Enhancing Factor for the AAA+ Lon Protease
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain 55989 / EAEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.503 Å
Deposited: 2017-09-08
Authors: Abe, Y., Shioi, S., Kita, S., Nakata, H., Maenaka, K., Kohda, D., Katayama, T., Ueda, T.
PDB entry 5ycr: X-Ray Structure of Enoyl-Acyl Carrier Protein Reductase from Bacillus Anthracis with NAD+
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2017-09-08
Authors: Kim, H.T.
PDB entry 5ycs: X-Ray Structure of Enoyl-Acyl Carrier Protein Reductase from Bacillus Anthracis with triclosan
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-09-08
Authors: Kim, H.T.
PDB entry 5yct: Engineered hairpin loop3 mutant monomer in Single-chain Monellin
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.851 Å
Deposited: 2017-09-08
Authors: Surana, P., Nandwani, N., Udgaonkar, J.B., Gosavi, S., Das, R.
PDB entry 5ycu: Domain swapped dimer of engineered hairpin loop1 mutant in Single-chain Monellin
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2017-09-08
Authors: Surana, P., Nandwani, N., Udgaonkar, J.B., Gosavi, S., Das, R.
PDB entry 5ycv: X-Ray Structure of Enoyl-Acyl Carrier Protein Reductase from Bacillus Anthracis (Apo form)
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.851 Å
Deposited: 2017-09-08
Authors: Kim, H.T.
PDB entry 5ycw: Double domain swapped dimer of engineered hairpin loop1 and loop3 mutant in Single-chain Monellin
Classification: PLANT PROTEIN
Source organism: Dioscoreophyllum cumminsii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.285 Å
Deposited: 2017-09-08
Authors: Surana, P., Nandwani, N., Udgaonkar, J.B., Gosavi, S., Das, R.
PDB entry 5ycx: X-Ray Structure of Enoyl-Acyl Carrier Protein Reductase from Bacillus Anthracis with c-terminal His tag (Apo form)
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2017-09-08
Authors: Kim, H.T.
PDB entry 5ycz: Crystal structure of Alocasin, protease inhibitor from Giant Taro (Arum macrorrhizon)
Classification: PLANT PROTEIN
Source organism: Alocasia macrorrhizos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.502 Å
Deposited: 2017-09-08
Authors: Vajravijayan, S., Pletnev, S., Nandhagopal, N., Gunasekaran, K.
PDB entry 5yd0: Crystal structure of Schlafen 13 (SLFN13) N'-domain
Classification: HYDROLASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.182 Å
Deposited: 2017-09-09
Authors: Yang, J.-Y., Gao, S.
PDB entry 5yd2: Crystal Structure of Delta 4 mutant of EhPSAT (Phosphoserine aminotransferase of Entamoeba histolytica)
Classification: TRANSFERASE
Source organism: Entamoeba histolytica HM-3:IMSS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2017-09-10
Authors: Singh, R.K., Gourinath, S.
PDB entry 5yd3: Crystal structure of the scFv antibody 4B08 with epitope peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2017-09-11
Authors: Caaveiro, J.M.M., Miyanabe, K., Tsumoto, K.
PDB entry 5yd4: Crystal structure of the scFv antibody 4B08 with epitope peptide (mutation T6A)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2017-09-11
Authors: Caaveiro, J.M.M., Miyanabe, K., Tsumoto, K.
PDB entry 5yd5: Crystal structure of the scFv antibody 4B08 with epitope peptide (mutation N3A)
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2017-09-11
Authors: Caaveiro, J.M.M., Miyanabe, K., Tsumoto, K.
PDB entry 5yd6: Crystal structure of PG-bound Nurr1-LBD
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2017-09-11
Authors: Sreekanth, R., Yoon, H.S.
PDB entry 5yd7: Crystal Structure OF VIM-2 Metallo-beta-lactamase
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-09-11
Authors: Wachino, J.
PDB entry 5yd8: Crystal structure of human PCNA in complex with APIM of human ZRANB3
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-09-12
Authors: Hashimoto, H., Tagata, R.
PDB entry 5yda: The crystal structure of the Acyl Transferase domain of SpnD
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces sp. CNQ431
Experimental method: X-RAY DIFFRACTION
Resolution: 2.353 Å
Deposited: 2017-09-12
Authors: Li, Y., Qu, X.D., Zhou, J.H.
PDB entry 5ydb: Crystal structure of the complex of type II dehydroquinate dehydratase from Acinetobacter baumannii with dehydroquinic acid at 1.76 Angstrom resolution
Classification: LYASE
Source organism: Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2017-09-12
Authors: Iqbal, N., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 5ydc: Crystal structure of mercury soaked C-terminal domain of Rv1828 from Mycobacterium tuberculosis
Classification: TRANSCRIPTION REGULATOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2017-09-12
Authors: Singh, S., Karthikeyan, S.
PDB entry 5ydd: Crystal structure of C-terminal domain of Rv1828 from Mycobacterium tuberculosis
Classification: TRANSCRIPTION REGULATOR
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2017-09-12
Authors: Singh, S., Karthiekeyan, S.
PDB entry 5yde: Crystal structure of a disease-related gene, hCDC73(1-111)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.023 Å
Deposited: 2017-09-13
Authors: Sun, W., Kuang, X.L., Liu, Y.P., Tian, L.F., Yan, X.X., Xu, W.Q.
PDB entry 5ydf: Crystal structure of a disease-related gene, hCDC73(1-100)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.399 Å
Deposited: 2017-09-13
Authors: Sun, W., Kuang, X.L., Liu, Y.P., Tian, L.F., Yan, X.X., Xu, W.Q.
PDB entry 5ydg: Crystal structure of the Arabidopsis thaliana chloroplast RNA editing factors 2(MORF2)
Classification: RNA BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.405 Å
Deposited: 2017-09-13
Authors: Wang, X., Yang, J.Y., Wang, Y.L., Gao, Y.S.
PDB entry 5ydh: Crystal structure of acetylcholinesterase catalytic subunits of the malaria vector anopheles gambiae, 3.2 A
Classification: HYDROLASE
Source organism: Anopheles gambiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.21 Å
Deposited: 2017-09-13
Authors: Han, Q., Guan, H., Robinson, H., Ding, H., Liao, C., Li, J.
PDB entry 5ydi: Crystal structure of acetylcholinesterase catalytic subunits of the malaria vector anopheles gambiae, new crystal packing
Classification: HYDROLASE
Source organism: Anopheles gambiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2017-09-13
Authors: Han, Q., Guan, H., Ding, H., Liao, C., Robinson, H., Li, J.
PDB entry 5ydj: Crystal structure of anopheles gambiae acetylcholinesterase in complex with PMSF
Classification: HYDROLASE
Source organism: Anopheles gambiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2017-09-13
Authors: Han, Q., Guan, H., Ding, H., Liao, C., Robinson, H., Li, J.
PDB entry 5ydk: Crystal structure of RNF168 UDM1 in complex with Lys63-linked diubiquitin, tetrameric form
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.505 Å
Deposited: 2017-09-13
Authors: Takahashi, T.S., Sato, Y., Fukai, S.
PDB entry 5ydl: The crystal structure of the Acyl Transferase domain of SpnD complex with 2-(pent-4-yn-1-yl)malonyl
Classification: TRANSFERASE
Source organism: Streptomyces sp. CNQ431
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2017-09-13
Authors: Li, Y., Qu, X.D., Zhou, J.H.
PDB entry 5ydm: The crystal structure of the Acyl Transferase domain of SpnD complex with benzylmalonyl
Classification: TRANSFERASE
Source organism: Streptomyces sp. CNQ431
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2017-09-13
Authors: Li, Y., Qu, X.D., Zhou, J.H.
PDB entry 5ydn: Mu pahge neck subunit
Classification: VIRAL PROTEIN
Source organism: Escherichia virus Mu
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-09-13
Authors: Takeda, S., Iwasaki, T., Yamashita, E., Nakagawa, A.
PDB entry 5ydo: Regulatory domain of HypT from Salmonella typhimurium (apo-form)
Classification: DNA BINDING PROTEIN
Source organism: Salmonella choleraesuis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-09-13
Authors: Jo, I., Hong, S., Ahn, J., Ha, N.C.
PDB entry 5ydp: Crystal Structure of TetR Family Repressor AlkX from Dietzia sp. Strain DQ12-45-1b Implicated in Biodegradation of n-Alkanes
Classification: GENE REGULATION
Source organism: Dietzia sp. DQ12-45-1b
Experimental method: X-RAY DIFFRACTION
Resolution: 3.091 Å
Deposited: 2017-09-14
Authors: Zheng, H., Gao, Y., Liang, J.L.