LiteFold/PDB huggingface dataset:
PDB entry 5yto: Crystal Structure of human Superoxide Dismutase I (hSOD1) in complex with a napthalene-catechol linked compound.
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-11-19
Authors: Padmanabhan, B., Manjula, R.
PDB entry 5ytp: Crystal Structure of TTHA0139 L34A from Thermus thermophilus HB8
Classification: DNA BINDING PROTEIN
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.457 Å
Deposited: 2017-11-19
Authors: Takao, K., Inoue, M., Fukui, K., Yano, T., Masui, R.
PDB entry 5ytq: Crystal Structure of TTHA0139 L34A with Lanthanum from Thermus thermophilus HB8
Classification: DNA BINDING PROTEIN
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.393 Å
Deposited: 2017-11-19
Authors: Takao, K., Inoue, M., Fukui, K., Yano, T., Masui, R.
PDB entry 5yts: Crystal structure of YB1 cold-shock domain in complex with UCUUCU
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2017-11-20
Authors: Yang, X., Huang, Y.
PDB entry 5ytt: Crystal structure of YB1 cold-shock domain in complex with UCAUGU
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-11-20
Authors: Yang, X., Huang, Y.
PDB entry 5ytu: Structure of human SOD1 complexed with isoproteranol in C2221 space group
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-11-20
Authors: Manjula, R., Padmanabhan, B.
PDB entry 5ytv: Crystal structure of YB1 cold-shock domain in complex with UCAUCU
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-11-20
Authors: Yang, X., Huang, Y.
PDB entry 5ytx: Crystal structure of YB1 cold-shock domain in complex with UCAACU
Classification: RNA BINDING PROTEIN/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.551 Å
Deposited: 2017-11-20
Authors: Yang, X., Huang, Y.
PDB entry 5yty: Crystal structure of echinomycin-d(ACGACGT/ACGTCGT) complex
Classification: ANTIBIOTIC/DNA
Source organism: Streptomyces echinatus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2017-11-20
Authors: Hou, M.H., Wu, P.C., Kao, Y.F.
PDB entry 5ytz: Crystal structure of echinomycin-d(ACGTCGT)2 complex
Classification: ANTIBIOTIC/DNA
Source organism: Streptomyces echinatus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2017-11-20
Authors: Hou, M.H., Wu, P.C., Kao, Y.F.
PDB entry 5yu0: Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Classification: LYASE
Source organism: Streptomyces pristinaespiralis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2017-11-20
Authors: Min, K.J., Yoon, H.J., Matsuura, A., Kim, Y.H., Lee, H.H.
PDB entry 5yu1: Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Classification: LYASE
Source organism: Streptomyces pristinaespiralis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.923 Å
Deposited: 2017-11-20
Authors: Min, K.J., Yoon, H.J., Matsuura, A., Kim, Y.H., Lee, H.H.
PDB entry 5yu2: Structure of Ribonuclease YabJ
Classification: GENE REGULATION
Source organism: Staphylococcus aureus (strain Mu50 / ATCC 700699)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2017-11-20
Authors: Kim, H.J., Kwon, A.R., Lee, B.J.
PDB entry 5yu3: Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Classification: LYASE
Source organism: Streptomyces pristinaespiralis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2017-11-20
Authors: Min, K.J., Yoon, H.J., Matsuura, A., Kim, Y.H., Lee, H.H.
PDB entry 5yu4: Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Classification: LYASE
Source organism: Streptomyces pristinaespiralis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.144 Å
Deposited: 2017-11-20
Authors: Min, K.J., Yoon, H.J., Matsuura, A., Kim, Y.H., Lee, H.H.
PDB entry 5yu5: Crystal structure of shaft pilin spaD from Lactobacillus rhamnosus GG
Classification: CELL ADHESION
Source organism: Lactobacillus rhamnosus GG
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2017-11-20
Authors: Chaurasia, P., Pratap, S., Palva, A., von Ossowski, I., Krishnan, V.
PDB entry 5yu6: CRYSTAL STRUCTURE OF EXPORTIN-5:RANGTP COMPLEX
Classification: RNA BINDING PROTEIN/NUCLEAR PROTEIN
Source organism: Canis lupus familiaris; Homo sapiens; unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 2.997 Å
Deposited: 2017-11-20
Authors: Yamazawa, R., Jiko, C., Lee, S.J., Yamashita, E.
PDB entry 5yu7: CRYSTAL STRUCTURE OF EXPORTIN-5
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.301 Å
Deposited: 2017-11-20
Authors: Yamazawa, R., Jiko, C., Lee, S.J., Yamashita, E.
PDB entry 5yu8: Cofilin decorated actin filament
Classification: CYTOSOLIC PROTEIN
Source organism: Gallus gallus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2017-11-21
Authors: Tanaka, K., Narita, A.
PDB entry 5yu9: Crystal structure of EGFR 696-1022 T790M in complex with Ibrutinib
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2017-11-21
Authors: Yan, X.E., Yun, C.H.
PDB entry 5yua: Crystal structure of voltage-gated sodium channel NavAb in high-pH condition
Classification: MEMBRANE PROTEIN
Source organism: Arcobacter butzleri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.80086 Å
Deposited: 2017-11-21
Authors: Irie, K., Shimomura, T., Fujiyoshi, Y.
PDB entry 5yub: Crystal structure of voltage-gated sodium channel NavAb E32Q mutant
Classification: MEMBRANE PROTEIN
Source organism: Arcobacter butzleri
Experimental method: X-RAY DIFFRACTION
Resolution: 3.40004 Å
Deposited: 2017-11-21
Authors: Irie, K., Shimomura, T., Fujiyoshi, Y.
PDB entry 5yuc: Crystal structure of voltage-gated sodium channel NavAb N49K mutant
Classification: MEMBRANE PROTEIN
Source organism: Arcobacter butzleri
Experimental method: X-RAY DIFFRACTION
Resolution: 3.40099 Å
Deposited: 2017-11-21
Authors: Irie, K., Shimomura, T., Fujiyoshi, Y.
PDB entry 5yud: Flagellin derivative in complex with the NLR protein NAIP5
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.28 Å
Deposited: 2017-11-21
Authors: Yang, X.R., Yang, F., Wang, W.G., Lin, G.Z.
PDB entry 5yuf: Crystal Structure of PML RING tetramer
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-11-22
Authors: Wang, P., Benhend, S., Wu, H., Breitenbach, V., Zhen, T., Jollivet, F., Peres, L., Li, Y., Chen, S., Chen, Z., de THE, H., Meng, G.
PDB entry 5yug: AtVAL1 PHD-Like domain in the P31 space group
Classification: STRUCTURAL PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2017-11-22
Authors: Zhang, M.M., Wu, B.X.
PDB entry 5yuh: AtVAL1 PHD-Like domain in the P6122 space group
Classification: STRUCTURAL PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2017-11-22
Authors: Zhang, M.M., Wu, B.X.
PDB entry 5yui: CO2 release in human carbonic anhydrase II crystals: reveal histidine 64 and solvent dynamics
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2017-11-22
Authors: Kim, C.U., Park, S.Y., McKenna, R.
PDB entry 5yuj: CO2 release in human carbonic anhydrase II crystals: reveal histidine 64 and solvent dynamics
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2017-11-22
Authors: Kim, C.U., Park, S.Y., McKenna, R.
PDB entry 5yuk: CO2 release in human carbonic anhydrase II crystals: reveal histidine 64 and solvent dynamics
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2017-11-22
Authors: Kim, C.U., Park, S.Y., McKenna, R.
PDB entry 5yul: Native Structure of hSOD1 in P6322 space group
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-11-22
Authors: Manjula, R., Padmanabhan, B.
PDB entry 5yum: Crystallographic structures of IlvN.Val/Ile complexes:Conformational selectivity for feedback inhibition of AHASs
Classification: TRANSFERASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.432 Å
Deposited: 2017-11-22
Authors: Sarma, S.P., Bansal, A., Schindelin, H., Demeler, B.
PDB entry 5yun: Crystal structure of SSB complexed with myc
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2017-11-22
Authors: Huang, Y.H., Huang, C.Y.
PDB entry 5yuo: Crystal structure of SSB protein from Pseudomonas aeruginosa PAO1
Classification: DNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.037 Å
Deposited: 2017-11-22
Authors: Huang, Y.H., Huang, C.Y.
PDB entry 5yup: Crystal Structure of the Fab fragment of FVIIa antibody mAb4F5
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2017-11-22
Authors: Jiang, L.G., Persson, E., Huang, M.D.
PDB entry 5yuq: The high resolution structure of chitinase (RmChi1) from the thermophilic fungus Rhizomucor miehei (sp P1)
Classification: HYDROLASE
Source organism: Rhizomucor miehei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2017-11-23
Authors: Jiang, Z.Q., Hu, S.Q., Liu, Y.C., Qin, Z., Yan, Q.J., Yang, S.Q.
PDB entry 5yur: DNA polymerase IV - DNA ternary complex 1
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.035 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yus: DNA polymerase IV - DNA ternary complex 2
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yut: DNA polymerase IV - DNA ternary complex 3
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yuu: DNA polymerase IV - DNA ternary complex 4
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yuv: DNA polymerase IV - DNA ternary complex 5
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yuw: DNA polymerase IV - DNA ternary complex 6
Classification: DNA BINDING PROTEIN/DAN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.124 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yux: DNA polymerase IV - DNA ternary complex 8
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yuy: DNA polymerase IV - DNA ternary complex 9
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yuz: DNA polymerase IV - DNA ternary complex 11
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yv0: DNA polymerase IV - DNA ternary complex 12
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yv1: DNA polymerase IV - DNA ternary complex 13
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yv2: DNA polymerase IV - DNA ternary complex 14
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yv3: DNA polymerase IV - DNA ternary complex 7
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2017-11-23
Authors: Kottur, J., Nair, D.T.
PDB entry 5yv5: Crystal structure of the complex of archaeal ribosomal stalk protein aP1 and archaeal ribosome recycling factor aABCE1.
Classification: TRANSLATION
Source organism: Pyrococcus furiosus COM1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-11-24
Authors: Imai, H., Abe, T., Miyoshi, T., Nishikawa, S., Ito, K., Uchiumi, T.
PDB entry 5yv7: Racemic X-ray Structure of Calcicludine
Classification: TOXIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.395 Å
Deposited: 2017-11-24
Authors: Shuai, G., Qian, Q., Lei, L.
PDB entry 5yv8: Structure of CaMKK2 in complex with CKI-002
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.927 Å
Deposited: 2017-11-24
Authors: Niwa, H., Handa, N., Yokoyama, S.
PDB entry 5yv9: Structure of CaMKK2 in complex with CKI-009
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2017-11-24
Authors: Niwa, H., Handa, N., Yokoyama, S.
PDB entry 5yva: Structure of CaMKK2 in complex with CKI-010
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.574 Å
Deposited: 2017-11-24
Authors: Niwa, H., Handa, N., Yokoyama, S.
PDB entry 5yvb: Structure of CaMKK2 in complex with CKI-011
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2017-11-24
Authors: Niwa, H., Handa, N., Yokoyama, S.
PDB entry 5yvc: Structure of CaMKK2 in complex with CKI-012
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2017-11-24
Authors: Niwa, H., Handa, N., Yokoyama, S.
PDB entry 5yvd: Structural and biochemical characterization of endoribonuclease Nsp15 encoded by Middle East Respiratory Syndrome Coronavirus
Classification: HYDROLASE
Source organism: Middle East respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-11-24
Authors: Yan, L., Zhang, L.
PDB entry 5yve: Crystal structure of human P2X3 receptor in complex with the AF-219 negative allosteric modulator
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2017-11-25
Authors: Wang, Y., Hattori, M.
PDB entry 5yvf: Crystal structure of BFA1
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.804 Å
Deposited: 2017-11-25
Authors: Pu, H., Zhang, L., Duan, Z.K., Peng, L.W., Liu, L.
PDB entry 5yvg: Crystal structure of Karyopherin beta2 in complex with FUS(full length)
Classification: PROTEIN TRANSPORT/RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 4.05 Å
Deposited: 2017-11-25
Authors: Yoshizawa, T., Fung, H.Y.J., Chook, Y.M.
PDB entry 5yvh: Crystal structure of Karyopherin beta2 in complex with FUS(371-526)
Classification: PROTEIN TRANSPORT/RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2017-11-25
Authors: Yoshizawa, T., Fung, H.Y.J., Chook, Y.M.
PDB entry 5yvi: Crystal structure of Karyopherin beta2 in complex with FUS(456-526)
Classification: PROTEIN TRANSPORT/RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2017-11-25
Authors: Yoshizawa, T., Fung, H.Y.J., Chook, Y.M.
PDB entry 5yvj: Crystal structure of full length NS2B47-NS3 (gD4NS2BNS3) from Dengue virus 4 in open conformation
Classification: VIRAL PROTEIN
Source organism: Dengue virus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.508 Å
Deposited: 2017-11-26
Authors: Phoo, W.W., El Sahili, A.
PDB entry 5yvk: Crystal structure of a cyclase Famc1 from Fischerella ambigua UTEX 1903
Classification: TRANSFERASE
Source organism: Fischerella ambigua UTEX 1903
Experimental method: X-RAY DIFFRACTION
Resolution: 1.292 Å
Deposited: 2017-11-26
Authors: Hu, X.Y., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 5yvl: Crystal structure of a cyclase Hpiu5 from Fischerella sp. ATCC 43239
Classification: TRANSFERASE
Source organism: Fischerella sp. ATCC 43239
Experimental method: X-RAY DIFFRACTION
Resolution: 2.059 Å
Deposited: 2017-11-26
Authors: Hu, X.Y., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 5yvm: Crystal Structure of the archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase ADH/D1 bound to NZQ
Classification: OXIDOREDUCTASE
Source organism: candidate divison MSBL1 archaeon SCGC-AAA259E19
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2017-11-26
Authors: Groetzinger, S.W., Strillinger, E., Frank, A., Eppinger, J., Groll, M., Arold, S.T.
PDB entry 5yvn: Human Glutathione Transferase Omega1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2017-11-27
Authors: Saisawang, C., Ketterman, A., Wongsantichon, J.
PDB entry 5yvo: Human Glutathione Transferase Omega1 covalently bound to ML175 inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2017-11-27
Authors: Saisawang, C., Ketterman, A., Wongsantichon, J.
PDB entry 5yvp: Crystal structure of an apo form cyclase Filc1 from Fischerella sp. TAU
Classification: TRANSFERASE
Source organism: Fischerella sp. TAU
Experimental method: X-RAY DIFFRACTION
Resolution: 2.051 Å
Deposited: 2017-11-27
Authors: Hu, X.Y., Liu, W.D., Chen, C.C., Guo, R.T.
PDB entry 5yvq: Complex of Mu phage tail fiber and its chaperone
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Mu
Experimental method: X-RAY DIFFRACTION
Resolution: 2.103 Å
Deposited: 2017-11-27
Authors: Takeda, S., Sakai, K., Iwazaki, T., Yamashita, E., Nakagawa, A.
PDB entry 5yvr: Crystal Structure of the H277A mutant of ADH/D1, an archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: candidate divison MSBL1 archaeon SCGC-AAA259E19
Experimental method: X-RAY DIFFRACTION
Resolution: 1.896 Å
Deposited: 2017-11-27
Authors: Groetzinger, S.W., Strillinger, E., Frank, A., Eppinger, J., Groll, M., Arold, S.T.
PDB entry 5yvs: Crystal Structure of the archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase ADH/D1 bound to NADP
Classification: OXIDOREDUCTASE
Source organism: candidate divison MSBL1 archaeon SCGC-AAA259E19
Experimental method: X-RAY DIFFRACTION
Resolution: 2.345 Å
Deposited: 2017-11-27
Authors: Groetzinger, S.W., Strillinger, E., Frank, A., Eppinger, J., Groll, M., Arold, S.T.
PDB entry 5yvt: Crystal structure of the alpha gamma heterodimer of human IDH3 in complex with Mg(2+) and NADH
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2017-11-27
Authors: Ma, T., Ding, J.
PDB entry 5yvu: Crystal structures of unlinked full length NS3 from Dengue virus provide insights into dynamics of protease domain
Classification: VIRAL PROTEIN
Source organism: Bos taurus; Dengue virus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.491 Å
Deposited: 2017-11-27
Authors: Phoo, W.W., El Sahili, A.
PDB entry 5yvv: Crystal structure of full length NS3 protein (gD4NS2BNS3) from DENV4 in closed conformation
Classification: VIRAL PROTEIN
Source organism: Dengue virus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 3.097 Å
Deposited: 2017-11-27
Authors: PHOO, W.W., Sahili, A.E.
PDB entry 5yvw: Crystal structure of full length NS3 protein (eD4NS2BNS3) from DENV4 in closed conformation
Classification: VIRAL PROTEIN
Source organism: Dengue virus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2017-11-27
Authors: PHOO, W.W., El Sahili, A.
PDB entry 5yvx: Crystal structure of SDG8 CW domain in complex with H3K4me1 peptide
Classification: TRANSFERASE
Source organism: Arabidopsis thaliana; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.591 Å
Deposited: 2017-11-27
Authors: Liu, Y., Huang, Y.
PDB entry 5yvy: Crystal structure of unlinked full length NS3 protein (eD4NS2BNS3) from DENV4 in closed conformation
Classification: VIRAL PROTEIN
Source organism: Dengue virus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2017-11-27
Authors: PHOO, W.W., El Sahili, A.
PDB entry 5yvz: Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with alphaketoglutarate and Fe(III)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Methylacidiphilum infernorum (isolate V4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2017-11-28
Authors: Chung, H.S., Pemble, C.W., Joo, S.H., Raetz, C.R.
PDB entry 5yw0: Crystal structure of the Kdo hydroxylase KdoO, a non-heme Fe(II) alphaketoglutarate dependent dioxygenase in complex with succinate and Fe(III)
Classification: BIOSYNTHETIC PROTEIN
Source organism: Methylacidiphilum infernorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2017-11-28
Authors: Chung, H.S., Pemble, C.W., Joo, S.H., Raetz, C.R.
PDB entry 5yw1: Crystal structure of full length NS3 protein (eD4NS2BNS3) in complex with Bovine Pancreatic Trypsin Inhibitor
Classification: VIRAL PROTEIN
Source organism: Bos taurus; Dengue virus 4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2017-11-28
Authors: Phoo, W.W., El Sahili, A.
PDB entry 5yw2: Crystal structure of Adenine phosphoribosyltransferase from Francisella tularensis.
Classification: TRANSFERASE
Source organism: Francisella tularensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2017-11-28
Authors: Pavithra, G.C., Ramagopal, U.A.
PDB entry 5yw3: X-ray Crystal Structure of Pseudoazurin Thr36Lys Variant
Classification: ELECTRON TRANSPORT
Source organism: Achromobacter cycloclastes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2017-11-28
Authors: Sakai, C., Yamaguchi, T., Kohzuma, T.
PDB entry 5yw4: Structure-Guided Engineering of Reductase: Efficient Attenuating Substrate Inhibition in Asymmetric Catalysis
Classification: OXIDOREDUCTASE
Source organism: Scheffersomyces stipitis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.047 Å
Deposited: 2017-11-28
Authors: Shang, Y.P., Chen, Q., Li, A.T., Yu, H.L., Xu, J.H.
PDB entry 5yw5: Crystal structure of Adenine phosphoribosyltransferase from Francisella tularensis in complex with adenine
Classification: TRANSFERASE
Source organism: Francisella tularensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-11-28
Authors: Pavithra, G.C., Ramagopal, U.A.
PDB entry 5yw7: Structure of pancreatic ATP-sensitive potassium channel bound with glibenclamide and ATPgammaS (focused refinement on SUR1 ABC transporter module at 4.4A)
Classification: MEMBRANE PROTEIN
Source organism: Mesocricetus auratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2017-11-29
Authors: Chen, L., Wu, J.X.
PDB entry 5yw8: Structure of pancreatic ATP-sensitive potassium channel bound with ATPgammaS (all particles at 4.4A)
Classification: MEMBRANE PROTEIN
Source organism: Mesocricetus auratus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2017-11-29
Authors: Chen, L., Wu, J.X.
PDB entry 5yw9: Structure of pancreatic ATP-sensitive potassium channel bound with ATPgammaS (class1 5.0A)
Classification: MEMBRANE PROTEIN
Source organism: Mesocricetus auratus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5 Å
Deposited: 2017-11-29
Authors: Chen, L., Wu, J.X.
PDB entry 5ywa: Structure of pancreatic ATP-sensitive potassium channel bound with ATPgammaS (CTD class 2 at 6.1A)
Classification: MEMBRANE PROTEIN
Source organism: Mesocricetus auratus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.1 Å
Deposited: 2017-11-29
Authors: Chen, L., Wu, J.X.
PDB entry 5ywb: Structure of pancreatic ATP-sensitive potassium channel bound with Mg-ADP (CTD class2 at 5.2A)
Classification: MEMBRANE PROTEIN
Source organism: Mesocricetus auratus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.2 Å
Deposited: 2017-11-29
Authors: Chen, L., Wu, J.X.
PDB entry 5ywc: Structure of pancreatic ATP-sensitive potassium channel bound with Mg-ADP (CTD class1 at 4.3A)
Classification: MEMBRANE PROTEIN
Source organism: Mesocricetus auratus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2017-11-29
Authors: Chen, L., Wu, J.X.
PDB entry 5ywd: Structure of pancreatic ATP-sensitive potassium channel bound with Mg-ADP (focused refinement of SUR1 ABC transporter module at 4.22A)
Classification: MEMBRANE PROTEIN
Source organism: Mesocricetus auratus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2017-11-29
Authors: Chen, L., Wu, J.X.
PDB entry 5ywe: Crystal structure of hematopoietic prostaglandin D synthase apo form
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2017-11-29
Authors: Kamo, M., Furubayashi, N., Inaka, K., Aritake, K., Urade, Y.
PDB entry 5ywf: Crystal structure of 2H4 Fab
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.206 Å
Deposited: 2017-11-29
Authors: Qiu, X., Lei, Y., Yang, P., Gao, Q., Wang, N., Cao, L., Wang, X., Xu, Z.K., Rao, Z.
PDB entry 5ywg: Crystal structure of Arabidopsis thaliana HPPD complexed with Mesotrione
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.603 Å
Deposited: 2017-11-29
Authors: Lin, H.Y., Yang, W.C.
PDB entry 5ywh: Crystal structure of Arabidopsis thaliana HPPD complexed with Y13508
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2017-11-29
Authors: Yang, W.C., Lin, H.Y.
PDB entry 5ywi: Crystal structure of Arabidopsis thaliana HPPD Truncated mutant complexed with NTBC
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2017-11-29
Authors: Yang, W.C., Chen, J.N.
PDB entry 5ywj: Global regulatory element SarX
Classification: TRANSCRIPTION
Source organism: Staphylococcus aureus (strain NCTC 8325)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.102 Å
Deposited: 2017-11-29
Authors: Wang, Q.
PDB entry 5ywk: Crystal structure of Arabidopsis thaliana HPPD complexed with Benquitrione-Methyl
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.804 Å
Deposited: 2017-11-29
Authors: Yang, W.C., Lin, H.Y.
PDB entry 5ywl: SsCR_L211H
Classification: OXIDOREDUCTASE
Source organism: Scheffersomyces stipitis CBS 6054
Experimental method: X-RAY DIFFRACTION
Resolution: 2.098 Å
Deposited: 2017-11-29
Authors: Shang, Y.P., Chen, Q., Li, A.T., Yu, H.L., Xu, J.H.
PDB entry 5ywm: Crystal structure of CK2a2 form-1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.939 Å
Deposited: 2017-11-29
Authors: Tsuyuguchi, M., Kinoshita, T.
PDB entry 5ywn: SsCR_L211H-NADP+
Classification: OXIDOREDUCTASE
Source organism: Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.039 Å
Deposited: 2017-11-29
Authors: Shang, Y.P., Chen, Q., Yu, H.L., Xu, J.H.
PDB entry 5ywo: Structure of JEV-2F2 Fab complex
Classification: VIRUS
Source organism: Japanese encephalitis virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2017-11-29
Authors: Qiu, X., Lei, Y.F., Yang, P., Gao, Q., Wang, N., Cao, L., Yuan, S., Wang, X., Xu, Z.K., Rao, Z.
PDB entry 5ywp: JEV-2H4 Fab complex
Classification: IMMUNE SYSTEM
Source organism: Japanese encephalitis virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2017-11-29
Authors: Qiu, X.D., Lei, Y.F., Yang, P., Gao, Q., WANG, N., Cao, L., Yuan, S., Wang, X.X., Xu, Z.K., Rao, Z.H.
PDB entry 5ywr: Crystal Structure of RING E3 ligase ZNRF1 in complex with Ube2N (Ubc13)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2017-11-30
Authors: Behera, A.P., Naskar, P., Datta, A.B.
PDB entry 5yws: Crystal structure of TREX1 in complex with a Y structured DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2017-11-30
Authors: Hsiao, Y.Y.
PDB entry 5ywt: Crystal structure of TREX1 in complex with a duplex DNA with 3' overhang
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-11-30
Authors: Hsiao, Y.Y.
PDB entry 5ywu: Crystal structure of TREX1 in complex with a inosine contained dsDNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2017-11-30
Authors: Hsiao, Y.Y.
PDB entry 5ywv: Crystal structure of TREX1 in complex with a inosine contained ssDNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2017-11-30
Authors: Hsiao, Y.Y.
PDB entry 5yww: Archael RuvB-like Holiday junction helicase
Classification: HYDROLASE
Source organism: Sulfolobus islandicus REY15A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2017-11-30
Authors: Zhai, B., Yuan, Z., Han, X., DuPrez, K., Shen, Y., Fan, L.
PDB entry 5ywx: Crystal structure of hematopoietic prostaglandin D synthase in complex with F092
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2017-11-30
Authors: Kamo, M., Furubayashi, N., Inaka, K., Aritake, K., Omura, A., Tanaka, A.
PDB entry 5ywy: Crystal structure of the human prostaglandin E receptor EP4 in complex with Fab and ONO-AE3-208
Classification: SIGNALING PROTEIN-IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2017-11-30
Authors: Toyoda, Y., Morimoto, K., Suno, R., Horita, S., Iwata, S., Kobayashi, T.
PDB entry 5ywz: AID-SUN tandem of SUN1
Classification: NUCLEAR PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-11-30
Authors: Xu, Y., Li, W., Feng, W.
PDB entry 5yx1: Crystal structure of hematopoietic prostaglandin D synthase in complex with U004
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2017-12-01
Authors: Kamo, M., Furubayashi, N., Inaka, K., Aritake, K., Urade, Y., Takaya, D., Tanaka, A.
PDB entry 5yx2: Crystal structure of DNMT3A-DNMT3L in complex with DNA containing two CpG sites
Classification: TRANSFERASE/TRANSFERASE REGULATOR/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.653 Å
Deposited: 2017-12-01
Authors: Zhang, Z.M., Song, J.
PDB entry 5yx3: Chalcone isomerase from the Antarctic vascular plant Deschampsia Antarctica (DaCHI1)
Classification: ISOMERASE
Source organism: Deschampsia antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-12-01
Authors: Lee, C.W., Park, S., Lee, J.H.
PDB entry 5yx4: Isoliquiritigenin-complexed Chalcone isomerase (S189A) from the Antarctic vascular plant Deschampsia Antarctica (DaCHI1)
Classification: ISOMERASE
Source organism: Deschampsia antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-12-01
Authors: Lee, C.W., Park, S., Lee, J.H.
PDB entry 5yx6: Crystal structure of Rv3272 from M. tuberculosis orthorhombic form
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-12-01
Authors: Ansari, A., Shrimant, K.S., Venkatesh Pratap, J.
PDB entry 5yx9: Cryo-EM structure of human TRPC6 at 3.8A resolution
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2017-12-02
Authors: Chen, L., Tang, Q., Guo, W.
PDB entry 5yxa: Crystal structure of the C-terminal fragment of NS1 protein from yellow fever virus
Classification: VIRAL PROTEIN
Source organism: Yellow fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2017-12-04
Authors: Wang, H., Song, H., Qi, J., Shi, Y., Gao, G.F.
PDB entry 5yxb: A ligand binding to FXR
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2017-12-04
Authors: Yi, L., Yong, L.
PDB entry 5yxc: Crystal structure of Zinc binding protein ZinT in complex with citrate from E. coli
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.763 Å
Deposited: 2017-12-04
Authors: Chen, J., Wang, L., Shang, F., Xu, Y.
PDB entry 5yxd: A ligand F binding to FXR
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2017-12-05
Authors: Yi, L., Yong, L.
PDB entry 5yxe: Crystal Structure Analysis of feline serum albumin
Classification: TRANSPORT PROTEIN
Source organism: Felis catus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.40242 Å
Deposited: 2017-12-05
Authors: Kihira, K., Yokomaku, K., Akiyama, M., Morita, Y., Komatsu, T.
PDB entry 5yxf: Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105L mutant) in complex with Methionine
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2017-12-05
Authors: Sandeep, C.B., Addlagatta, A.
PDB entry 5yxg: Crystal structure of C-terminal fragment of SpaD from Lactobacillus rhamnosus GG generated by limited proteolysis
Classification: CELL ADHESION
Source organism: Lactobacillus rhamnosus GG
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2017-12-05
Authors: Chaurasia, P., Pratap, S., Palva, A., von Ossowski, I., Krishnan, V.
PDB entry 5yxh: Structure of Rheb-GDP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2017-12-05
Authors: Mahoney, S.J.
PDB entry 5yxi: Designed protein dRafX6
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2017-12-05
Authors: Liu, R.
PDB entry 5yxj: FXR ligand binding domain
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2017-12-05
Authors: Yi, L., Yong, L.
PDB entry 5yxk: High resolution crystal structure of Human B7-2 IgV domain in P21 space group
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2017-12-05
Authors: Lankipalli, S., Ramagopal, U.A.
PDB entry 5yxl: A ligand M binding to FXR
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2017-12-05
Authors: Yi, L., Yong, L.
PDB entry 5yxm: Crystal structure of Chlamydomonas Outer Arm Dynein Light Chain 1
Classification: CONTRACTILE PROTEIN
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.545 Å
Deposited: 2017-12-06
Authors: Toda, A., Tanaka, H., Nishikawa, Y., Yagi, T., Kurisu, G.
PDB entry 5yxn: A T cell receptor in complex with HLA-A0201 restricted Hepatitis C virus NS3 peptide (KLVALGINAV)
Classification: IMMUNE SYSTEM
Source organism: Hepatitis C virus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2017-12-06
Authors: Hui, F.
PDB entry 5yxo: Crystal structure of shaft pilin spaD from Lactobacillus rhamnosus GG in bent conformation
Classification: CELL ADHESION
Source organism: Lactobacillus rhamnosus GG
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2017-12-06
Authors: Chaurasia, P., Pratap, S., Palva, A., von Ossowski, I., Krishnan, V.
PDB entry 5yxt: Crystal structure of reducing end xylose-releasing exo-oligoxylanase
Classification: HYDROLASE
Source organism: Paenibacillus barengoltzii G22
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2017-12-07
Authors: Jiang, Z.Q., You, X., Huang, P., Ma, J.W.
PDB entry 5yxu: an affinity enhanced T cell receptor in complex with HLA-A0201 restricted HCV NS3 peptide KLVALGINAV
Classification: IMMUNE SYSTEM
Source organism: Hepatitis C virus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2017-12-07
Authors: Yi, L.
PDB entry 5yxw: Crystal structure of the prefusion form of measles virus fusion protein
Classification: VIRAL PROTEIN
Source organism: Measles virus; Measles virus (strain Ichinose-B95a)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.776 Å
Deposited: 2017-12-07
Authors: Hashiguchi, T., Fukuda, Y., Matsuoka, R., Kuroda, D., Kubota, M., Shirogane, Y., Watanabe, S., Tsumoto, K., Kohda, D., Plemper, R.K., Yanagi, Y.
PDB entry 5yxy: Crystal structure of the HyhL-HypA complex (form I)
Classification: METAL BINDING PROTEIN
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.299 Å
Deposited: 2017-12-07
Authors: Kwon, S., Watanabe, S., Nishitani, Y., Miki, K.
PDB entry 5yxz: Co-crystal Structure of KRAS (G12C) covalently bound with Quinazoline based inhibitor JBI484
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-12-07
Authors: Swaminathan, S., Thakur, M.K., Kandan, S., Gautam, A., Kanavalli, M., Simhadri, P., Gosu, R.
PDB entry 5yy0: Crystal structure of the HyhL-HypA complex (form II)
Classification: METAL BINDING PROTEIN
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.243 Å
Deposited: 2017-12-07
Authors: Kwon, S., Watanabe, S., Nishitani, Y., Miki, K.
PDB entry 5yy1: Co-crystal Structure of KRAS (G12C) covalently bound with Quinazoline based inhibitor JBI739
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2017-12-07
Authors: Swaminathan, S., Thakur, M.K., Kandan, S., Gautam, A., Kanavalli, M., Simhadri, P., Gosu, R.
PDB entry 5yy2: Crystal structure of AsqI with Zn
Classification: METAL BINDING PROTEIN
Source organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2017-12-07
Authors: Hara, K., Hashimoto, H., Kishimoto, S., Watanabe, K.
PDB entry 5yy3: Crystal structure of AsqI
Classification: METAL BINDING PROTEIN
Source organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.305 Å
Deposited: 2017-12-07
Authors: Hara, K., Hashimoto, H., Kishimoto, S., Watanabe, K.
PDB entry 5yy4: Crystal structure of the scFv antibody 4B08 with sulfated epitope peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2017-12-07
Authors: Caaveiro, J.M.M., Miyanabe, K., Tsumoto, K.
PDB entry 5yy5: Structural definition of a unique neutralization epitope on the receptor-binding domain of MERS-CoV spike glycoprotein
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Middle East respiratory syndrome coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2017-12-08
Authors: Zhang, S., Wang, P., Zhou, P., Wang, X., Zhang, L.
PDB entry 5yy6: Crystal structure of Arabidopsis thaliana HPPD truncated mutant complexed with Benquitrione
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.401 Å
Deposited: 2017-12-08
Authors: Yang, W.C., Chen, J.N., Yang, G.F.
PDB entry 5yy7: Crystal structure of Arabidopsis thaliana HPPD complexed with Benquitrione
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.298 Å
Deposited: 2017-12-08
Authors: Yang, W.C., Chen, J.N., Yang, G.F.
PDB entry 5yy8: Crystal structure of the Kelch domain of human NS1-BP
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.979 Å
Deposited: 2017-12-08
Authors: Guo, L., Liu, Y., Liang, H.
PDB entry 5yy9: Crystal structure of Tandem Tudor Domain of human UHRF1 in complex with LIG1-K126me3
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.653 Å
Deposited: 2017-12-08
Authors: Kori, S., Defossez, P.A., Arita, K.
PDB entry 5yya: Crystal structure of Tandem Tudor Domain of human UHRF1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2017-12-08
Authors: Kori, S., Defossez, P.A., Arita, K.
PDB entry 5yyb: Crystal structure of Sialic acid Binding protein from Haemophilus ducreyi with Neu5Gc
Classification: SUGAR BINDING PROTEIN
Source organism: Haemophilus ducreyi 35000HP
Experimental method: X-RAY DIFFRACTION
Resolution: 2.484 Å
Deposited: 2017-12-08
Authors: Subramanian, R., Setty, T.G.
PDB entry 5yyc: Crystal structure of alanine racemase from Bacillus pseudofirmus (OF4)
Classification: ISOMERASE
Source organism: Bacillus pseudofirmus (strain OF4)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.801 Å
Deposited: 2017-12-08
Authors: Dong, H., Hu, T.T., He, G.Z., Lu, D.R., Qi, J.X., Dou, Y.S., Long, W., He, X., Su, D., Ju, J.S.
PDB entry 5yyd: DNA polymerase IV - ternary complex 15
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2017-12-08
Authors: Kottur, J., Nair, D.T.
PDB entry 5yye: DNA polymerase IV - ternary complex 16
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.325 Å
Deposited: 2017-12-08
Authors: Kottur, J., Nair, D.T.
PDB entry 5yyf: Crystal structure of AF9 YEATS domain in complex with a peptide inhibitor ""PHQ-H3(Q5-K9)"" modified at K9 with 2-furancarboyl group
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.903 Å
Deposited: 2017-12-09
Authors: Li, Y., Li, H.
PDB entry 5yyl: Structure of Major Royal Jelly Protein 1 Oligomer
Classification: SIGNALING PROTEIN
Source organism: Apis mellifera
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2017-12-10
Authors: Tian, W., Chen, Z.
PDB entry 5yym: Crystal structures of E.coli arginyl-trna synthetase (argrs) in complex with substrate Arg
Classification: LIGASE
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2017-12-10
Authors: Zhou, M., Ye, S., Stephen, P., Zhang, R.G., Wang, E.D., Giege, R., Lin, S.X.
PDB entry 5yyn: Crystal structures of E.coli arginyl-trna synthetase (argrs) in complex with substrate TRNA(Arg)
Classification: LIGASE/RNA
Source organism: Escherichia coli (strain K12); Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2017-12-10
Authors: Zhou, M., Ye, S., Stephen, P., Zhang, R.G., Wang, E.D., Giege, R., Lin, S.X.
PDB entry 5yyp: Structure K137A thaumatin
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.01 Å
Deposited: 2017-12-10
Authors: Masuda, T., Kigo, S., Mitsumoto, M., Ohta, K., Suzuki, M., Mikami, B., Kitabatake, N., Tani, F.
PDB entry 5yyq: Structure K78A thaumatin
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2017-12-10
Authors: Masuda, T., Kigo, S., Mitsumoto, M., Ohta, K., Suzuki, M., Mikami, B., Kitabatake, N., Tani, F.
PDB entry 5yyr: Structure K106A thaumatin
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2017-12-10
Authors: Masuda, T., Kigo, S., Ohta, K., Mitsumoto, M., Mikami, B., Suzuki, M., Kitabatake, N., Tani, F.
PDB entry 5yys: Cryo-EM structure of L-fucokinase, GDP-fucose pyrophosphorylase (FKP)in Bacteroides fragilis
Classification: TRANSFERASE
Source organism: Bacteroides fragilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2017-12-11
Authors: Wang, J., Hu, H., Liu, Y., Zhou, Q., Wu, P., Yan, N., Wang, H.W., Wu, J.W., Sun, L.
PDB entry 5yyu: Crystal structure of Staphylococcus aureus single-stranded DNA-binding protein SsbB
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus subsp. aureus ED98
Experimental method: X-RAY DIFFRACTION
Resolution: 2.984 Å
Deposited: 2017-12-11
Authors: Huang, Y.H., Huang, C.Y.
PDB entry 5yyx: Crystal Structure of the MEK1 FHA domain
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 1.684 Å
Deposited: 2017-12-11
Authors: Xie, C., Li, F., Jiang, Y., Wu, J., Shi, Y.
PDB entry 5yyz: Crystal structure of the MEK1 FHA domain in complex with the HOP1 pThr318 peptide.
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae S288c; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.798 Å
Deposited: 2017-12-11
Authors: Xie, C., Li, F., Jiang, Y., Wu, J., Shi, Y.
PDB entry 5yz0: Cryo-EM Structure of human ATR-ATRIP complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2017-12-11
Authors: Rao, Q., Liu, M., Tian, Y., Wu, Z., Wang, H., Wang, J., Xu, Y.