LiteFold/PDB huggingface dataset:
PDB entry 9kjt: The cryo-EM structure of human PNPase in the closed conformation
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.84 Å
Deposited: 2024-11-12
Authors: Li, Y.C., Yuan, H.S.
PDB entry 9kju: Local refinement of the y+LAT1-4F2hc bound with Arg
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-11-12
Authors: Yan, R.H., Dai, L., Zhang, Y.Y., Zhang, T.
PDB entry 9kjx: Cryo-EM structure of the Retron-Eco7 complex (state 1)
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2024-11-12
Authors: Ishikawa, J., Yoneyama, K., Yamashita, K., Nishimasu, H.
PDB entry 9kjy: Cryo-EM structure of the Retron-Eco7 complex (state 2)
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2024-11-12
Authors: Ishikawa, J., Yoneyama, K., Yamashita, K., Nishimasu, H.
PDB entry 9kjz: Cryo-EM structure of the Retron-Eco7 complex (state 3)
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-11-12
Authors: Ishikawa, J., Yoneyama, K., Yamashita, K., Nishimasu, H.
PDB entry 9kk0: Solution structure of kappa-conotoxin RIIIJ
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2024-11-12
Authors: Lushpa, V.A., Vassilevski, A.A., Bocharov, E.V., Olivera, B.M., Rivier, J.E., Raghuraman, S.
PDB entry 9kk1: Cryo-EM structure of the Retron-Eco7 complex (state 4)
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2024-11-12
Authors: Ishikawa, J., Yoneyama, K., Yamashita, K., Nishimasu, H.
PDB entry 9kk2: Cryo-EM structure of the Retron-Eco7 complex (state 5)
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2024-11-12
Authors: Ishikawa, J., Yoneyama, K., Yamashita, K., Nishimasu, H.
PDB entry 9kk3: Solution structure of kappa-conotoxin RIIIK
Classification: TOXIN
Experimental method: SOLUTION NMR
Deposited: 2024-11-12
Authors: Lushpa, V.A., Vassilevski, A.A., Bocharov, E.V., Olivera, B.M., Rivier, J., Raghuraman, S.
PDB entry 9kk4: Crystal Structure of Bovine Pancreatic Trypsin in Complex with Pyridoxine
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2024-11-12
Authors: Akbar, Z., Ahmad, M.S.
PDB entry 9kk5: Crystal Structure of Bovine Pancreatic Trypsin in Complex with Pyridoxal
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-11-12
Authors: Akbar, Z., Ahmad, M.S.
PDB entry 9kk6: Cryo-EM structure of vanadate-trapped atABCB19 in lipid nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-11-12
Authors: Liu, Y., Liao, M.
PDB entry 9kk7: Neutron structure of Ferredoxin-NADP+ reductase from maize root -Reduced form
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: NEUTRON DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-11-13
Authors: Uenaka, M., Ohnishi, Y., Tanaka, H., Kurisu, G.
PDB entry 9kk8: Structure of the transaminase PhnW from Vibrio vulnificus in complex with PLP
Classification: TRANSFERASE
Source organism: Vibrio vulnificus NBRC 15645 = ATCC 27562
Experimental method: X-RAY DIFFRACTION
Resolution: 2.401 Å
Deposited: 2024-11-13
Authors: Ma, Q., Han, M.
PDB entry 9kk9: Structure of the transaminase PhnW from Vibrio vulnificus in complex with PLP and AEP
Classification: TRANSFERASE
Source organism: Vibrio vulnificus NBRC 15645 = ATCC 27562
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-11-13
Authors: Ma, Q., Han, M.
PDB entry 9kka: Structure of the K193M mutant of transaminase PhnW from Vibrio vulnificus in complex with PLP and AEP
Classification: TRANSFERASE
Source organism: Vibrio vulnificus NBRC 15645 = ATCC 27562
Experimental method: X-RAY DIFFRACTION
Resolution: 1.883 Å
Deposited: 2024-11-13
Authors: Ma, Q., Han, M.
PDB entry 9kkb: Cryo-EM Structure of CdnG-E2 complex with GTP from Serratia marcescens
Classification: ANTIVIRAL PROTEIN
Source organism: Serratia marcescens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2024-11-13
Authors: Xiao, J., Wang, L., Wang, Z.
PDB entry 9kkc: Neutron structure of Ferredoxin-NADP+ reductase from maize root -Oxidized form
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: NEUTRON DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-11-13
Authors: Uenaka, M., Ohnishi, Y., Tanaka, H., Kurisu, G.
PDB entry 9kkd: the structure of StnY
Classification: DNA BINDING PROTEIN
Source organism: Streptomyces albus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-11-13
Authors: Yang, S.Q., Guo, W.L., Yang, X., Liang, R.B., Huang, T.T., Fan, C.P., Zheng, J.T., Lin, S.J.
PDB entry 9kke: Cryo-EM structure of BUM-bound atABCB19 in lipid nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-11-13
Authors: Liu, Y., Liao, M.
PDB entry 9kkf: Structure of the human 40S ribosome complexed with HCV IRES and eIF3
Classification: RIBOSOME
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-13
Authors: Iwasaki, W., Kashiwagi, K., Sakamoto, A., Nishimoto, M., Takahashi, M., Machida, K., Imataka, H., Matsumoto, A., Shichino, Y., Iwasaki, S., Imami, K., Ito, T.
PDB entry 9kkg: High resolution structure of Ferredoxin-NADP+ reductase from maize root - Oxidized form, low X-ray dose
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2024-11-13
Authors: Uenaka, M., Ohnishi, Y., Tanaka, H., Kurisu, G.
PDB entry 9kkh: High resolution structure of Ferredoxin-NADP+ reductase from maize root - Reduced form, low X-ray dose
Classification: OXIDOREDUCTASE
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2024-11-13
Authors: Uenaka, M., Ohnishi, Y., Tanaka, H., Kurisu, G.
PDB entry 9kki: Crystal structure of the CYP153A double mutant L354V/V456G from Marinobacter aquaeolei
Classification: OXIDOREDUCTASE
Source organism: Marinobacter nauticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-11-13
Authors: Qin, M.M., Jiang, Y.P., Cong, Z.Q., Zhao, P.X.
PDB entry 9kkj: Structure of Nectin-4 D1 domain in complex with the Fab fragment of 9MW2821 mAb
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2024-11-13
Authors: Wen, H.Y.
PDB entry 9kkk: Cryo-EM structure of human SLC22A6 (OAT1) in the apo-state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.85 Å
Deposited: 2024-11-13
Authors: Jeon, H.M., Eun, J., Kim, Y.
PDB entry 9kkl: Structural Basis for the Recognition of Blood Group Trisaccharides by Tulane virus
Classification: VIRAL PROTEIN
Source organism: Rhesus macaque recovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-11-13
Authors: Qian, Y., Cong, J., Li, X., Chen, Y.
PDB entry 9kkm: cryo-EM structure of acetyl-CoA carboxyltransferase holoenzyme dimer from Shewanella oneidensis, mutant E1238A, complexed with ADP
Classification: LIGASE
Source organism: Shewanella oneidensis MR-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.14 Å
Deposited: 2024-11-13
Authors: Wang, W., Han, S.R., Xu, Y.Y., Gao, H.C.
PDB entry 9kkp: Crystal structure of Horse spleen L-ferritin mutant (E53F/E56F/E57F/R59F/E60F/E63F) with Nile Red
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-11-14
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.
PDB entry 9kkq: Structure of hSGLT2-MAP17 complex in the substrate-bound occluded conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-11-14
Authors: Chen, L., Cui, W., Sun, Z.
PDB entry 9kkr: Crystal structure of Horse spleen L-ferritin mutant (E53F/E56F/E57F/R59F/E60F/E63F)
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-14
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.
PDB entry 9kkt: Structure-guided interface engineering for modifying substrate binding and catalytic activity of 2-keto-3-deoxy-D-xylonate dehydratase
Classification: CARBOHYDRATE
Source organism: Caulobacter vibrioides NA1000
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2024-11-14
Authors: Liang, B.
PDB entry 9kku: Helix-loop-helix peptide (M49) in complex with VEGF-A
Classification: IMMUNE SYSTEM/DE NOVO PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2024-11-14
Authors: Kamo, M., Michigami, M., Inaka, K., Furubayashi, N., Kaito, S., Kobayashi, Y., Shinohara, Y., Fujii, I.
PDB entry 9kkv: Structure-guided interface engineering for modifying substrate binding and catalytic activity of 2-keto-3-deoxy-D-xylonate dehydratase
Classification: CARBOHYDRATE
Source organism: Caulobacter vibrioides NA1000
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-11-14
Authors: Liang, B.
PDB entry 9kkw: Structure of hSGLT2-MAP17 complex in the substrate-free inward-facing conformation in the presence of sodium
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-11-14
Authors: Chen, L., Cui, W., Sun, Z.
PDB entry 9kkx: Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 1) with covalently bound D-ring
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana; Striga hermonthica
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-11-14
Authors: Vancea, A.I., Huntington, B., Savva, C.G., Arold, S.T.
PDB entry 9kky: Co-crystal structure of human 8-oxoguanine glycosylase N149C mutant with DNA containing photocaged 8-oxoguanine
Classification: LYASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2024-11-14
Authors: Imura, T., Yang, K.-C., Hosokawa, Y., Shih, H.-Y., Ban, Y., Yamamoto, J., Maestre-Reyna, M.
PDB entry 9kkz: Crystal structure of DNA/RNA duplex obtained using the counter diffusion method on Earth (Na form)
Classification: DNA/RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-14
Authors: Kondo, J., Ando, S.
PDB entry 9kl0: Structure of hSGLT2-MAP17 complex in the substrate-free inward-facing conformation in the presence of potassium
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2024-11-14
Authors: Chen, L., Cui, W., Sun, Z.
PDB entry 9kl1: Crystal structure of DNA/RNA duplex obtained using the counter diffusion method in space (Na form)
Classification: DNA/RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-11-14
Authors: Kondo, J., Ando, S.
PDB entry 9kl2: Crystal structure of Pleurocybella porrigens lectin (PPL) in complex with GalNAc
Classification: SUGAR BINDING PROTEIN
Source organism: Pleurocybella porrigens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-11-14
Authors: Adachi, D., Ishimoto, N., Kawabata, H., Mizutani, K., Park, S.-Y., Tame, J.R.H., Kamata, K.
PDB entry 9kl3: CryoEM structure of Pleurocybella porrigens lectin (PPL) in complex with GalNAc
Classification: SUGAR BINDING PROTEIN
Source organism: Pleurocybella porrigens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2024-11-14
Authors: Ishimoto, N., Adachi, D., Kawabata, H., Park, S.Y., Tame, J.R.H., Kamata, K.
PDB entry 9kl4: Crystal structure of EGFR complexed with N-[4-[4-amino-6-ethynyl-5-(3-quinolyl)pyrrolo[2,3-d]pyrimidin-7-yl]norbornan-1-yl]pyrimidine-5-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2024-11-14
Authors: Suzuki, T., Kasuga, H., Yamamoto, F.
PDB entry 9kl5: Cryo-EM strucuture of human OAT1 in complex with probenecid
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2024-11-14
Authors: Jeon, H.M., Eun, J., Kim, Y.
PDB entry 9kl6: Crystal structure of NADP-specific glutamate dehydrogenase Gdh1 from Schizosaccharomyces pombe in complex with alpha-iminoglutarate and NADP+
Classification: OXIDOREDUCTASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-11-14
Authors: Tomita, T., Yoshida, A., Nishiyama, M.
PDB entry 9kl7: Crystal structure of a Streptococcal protein G B1 mutant
Classification: IMMUNE SYSTEM
Source organism: Finegoldia magna
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2024-11-14
Authors: Shiga, S., Makabe, K.
PDB entry 9kl8: Co-crystal structure of human 8-oxoguanine glycosylase N149C mutant with DNA containing photocaged 8-oxoguanine after deprotection
Classification: LYASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-11-14
Authors: Imura, T., Yang, K.-C., Hosokawa, Y., Shih, H.-Y., Ban, Y., Yamamoto, J., Maestre-Reyna, M.
PDB entry 9kl9: crystal structure of a mutant Poly(Ethylene terephthalate) hydrolase
Classification: HYDROLASE
Source organism: bacterium HR29
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-11-14
Authors: Wang, H., Feng, Y., Du, X.Y.
PDB entry 9kla: Crystal Structure of the bromodomain of human BRD9 in complex with the inhibitor Y22024
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-11-14
Authors: Chen, Z., Zhang, C., Xu, H., Wu, X., Zhang, Y., Xu, Y.
PDB entry 9klb: G9a in complex with RK-133232 (compound 16g)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2024-11-14
Authors: Niwa, H., Shirai, F., Sato, S., Nishigaya, Y., Ihara, K., Shirouzu, M., Umehara, T.
PDB entry 9klc: G9a in complex with the S-isomer of RK-131902 (racemic compound rac-10a)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-11-14
Authors: Niwa, H., Shirai, F., Sato, S., Nishigaya, Y., Ihara, K., Shirouzu, M., Umehara, T.
PDB entry 9kld: Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 2) with covalently bound D-ring
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana; Striga hermonthica
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-11-14
Authors: Vancea, A.I., Huntington, B., Savva, C.G., Arold, S.T.
PDB entry 9kle: Crystal structure of Horse spleen L-ferritin mutant (R52F/E56F/R59F/E63F) with Nile Red
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-11-14
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.
PDB entry 9klk: Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 4) with covalently bound D-ring
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana; Striga hermonthica
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-11-14
Authors: Vancea, A.I., Huntington, B., Savva, C.G., Arold, S.T.
PDB entry 9kll: Striga MAX2-ASK1 complex
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana; Striga hermonthica
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-11-14
Authors: Vancea, A.I., Huntington, B., Savva, C.G., Arold, S.T.
PDB entry 9klm: Cryo-EM structure of the monomeric Rhodobacter sphaeroides G1C LH1-RC core complex
Classification: PHOTOSYNTHESIS
Source organism: Cereibacter sphaeroides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2024-11-14
Authors: Wu, Y.-L., Yu, L.-J.
PDB entry 9kln: Cryo-EM structure of ChCas12b-sgRNA-target DNA ternary complex (Complex-A)
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Candidatus Hydrogenedentes bacterium ADurb.Bin170; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-11-14
Authors: Li, Y., Li, J., Pei, X., Gan, J., Lin, J.
PDB entry 9klo: Cryo-EM structure of ChCas12b-sgRNA-extended non-target DNA ternary complex (Complex-B)
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Candidatus Hydrogenedentes bacterium ADurb.Bin170; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2024-11-15
Authors: Li, Y., Li, J., Pei, X., Gan, J., Lin, J.
PDB entry 9klp: Cryo-EM structure of ChCas12b-sgRNA-extended non-target DNA ternary complex (Complex-C)
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Candidatus Hydrogenedentes bacterium ADurb.Bin170; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2024-11-14
Authors: Li, Y., Li, J., Pei, X., Gan, J., Lin, J.
PDB entry 9klq: Cryo-EM structure of ChCas12b-sgRNA-extended non-target DNA ternary complex (Complex-D)
Classification: RNA BINDING PROTEIN/RNA/DNA
Source organism: Candidatus Hydrogenedentes bacterium ADurb.Bin170; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-11-14
Authors: Li, Y., Li, J., Pei, X., Gan, J., Lin, J.
PDB entry 9kls: Crystal structure of a Streptococcal protein G B1 mutant
Classification: IMMUNE SYSTEM
Source organism: Finegoldia magna
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2024-11-15
Authors: Shiga, S., Watanabe, H., Honda, S.
PDB entry 9klt: Crystal structure of a Streptococcal protein G B1 mutant
Classification: IMMUNE SYSTEM
Source organism: Finegoldia magna
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2024-11-15
Authors: Shiga, S., Watanabe, H., Honda, S.
PDB entry 9klu: Crystal structure of a Streptococcal protein G B1 mutant
Classification: IMMUNE SYSTEM
Source organism: Finegoldia magna
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2024-11-15
Authors: Shiga, S., Watanabe, H., Honda, S.
PDB entry 9klv: Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 3) with covalently bound D-ring
Classification: SIGNALING PROTEIN
Source organism: Arabidopsis thaliana; Striga hermonthica
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-15
Authors: Vancea, A.I., Huntington, B., Savva, C.G., Arold, S.T.
PDB entry 9klw: Crystal structure of EGFR T790M, L858R mutant complexed with N-[4-[4-amino-6-ethynyl-5-(3-quinolyl)pyrrolo[2,3-d]pyrimidin-7-yl]norbornan-1-yl]pyrimidine-5-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2024-11-15
Authors: Suzuki, T., Kasuga, H., Yamamoto, F.
PDB entry 9klx: The complex structure of XhnM1 and Xinhaicarcin BG
Classification: TRANSFERASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.80001 Å
Deposited: 2024-11-15
Authors: Wu, L., Tang, G.L.
PDB entry 9kly: Crystal Structure of the bromodomain of human BRD9 in complex with the inhibitor Y22032
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-11-15
Authors: Chen, Z., Zhang, C., Xu, H., Wu, X., Zhang, Y., Xu, Y.
PDB entry 9klz: Human OAT1 in complex with olmesartan
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2024-11-15
Authors: Jeon, H.M., Eun, J., Kim, K.H., Kim, Y.
PDB entry 9km0: Cryo-EM structure of a tri-heme cytochrome-associated RC-LH1 complex from a marine photoheterotrophic bacterium, purified with EDTA-2Na-containing solutions
Classification: PHOTOSYNTHESIS
Source organism: Dinoroseobacter shibae DFL 12 = DSM 16493
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-11-15
Authors: Chen, J.H.
PDB entry 9km1: Crystal Structure of the bromodomain of human BRD9 in complex with the inhibitor Y22077
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2024-11-15
Authors: Chen, Z., Zhang, C., Xu, H., Wu, X., Zhang, Y., Xu, Y.
PDB entry 9km2: Cryo-EM structure of apo glycine transporter 2 in inward-facing state
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-11-15
Authors: Wang, Y., Zhao, Y.
PDB entry 9km3: Cryo-EM structure of glycine transporter 2 in complex with substrate glycine
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-11-15
Authors: Wang, Y., Zhao, Y.
PDB entry 9km4: Cryo-EM structure of glycine transporter 2 in complex with oleoyl-D-lysine
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-11-15
Authors: Wang, Y., Zhao, Y.
PDB entry 9km5: Cryo-EM structure of Xenopus tropicalis glycine transporter 2 in complex with ALX1393
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-11-15
Authors: Wang, Y., Zhao, Y.
PDB entry 9km6: The crystal structure of XhnM1 and its inhibitor sinefugin
Classification: TRANSFERASE
Source organism: Streptomyces xinghaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.00003 Å
Deposited: 2024-11-15
Authors: Wu, L., Tang, G.L.
PDB entry 9km7: Cryo-EM structure of glycine transporter 2 in complex with ORG25543
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-11-15
Authors: Wang, Y., Zhao, Y.
PDB entry 9km8: Cryo-EM structure of Xenopus tropicalis glycine transporter 2 in complex with VVZ149
Classification: MEMBRANE PROTEIN
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-11-15
Authors: Wang, Y., Zhao, Y.
PDB entry 9kma: Crystal structure of the CCA-adding enzyme from Arabidopsis thaliana
Classification: RNA BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.229 Å
Deposited: 2024-11-15
Authors: Wang, X., Li, Y.Y., Dou, Z.Y., Liu, L.
PDB entry 9kmb: Crystal structure of human glutaminyl cyclase in complex with N-(2-(1H-imidazol-5-yl)ethyl)-4-methoxybenzenesulfonamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-11-15
Authors: Li, G.-B., Wu, J.-W., Ning, X.-L.
PDB entry 9kmc: Cryo-EM structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2 and anti-CD25 Fab S417
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-11-15
Authors: Katsura, K., Matsumoto, T., Shirouzu, M.
PDB entry 9kmd: Nanomer Msp1 from S.cerevisiae (with a catalytic dead mutation) in complex with an unknown peptide substrate
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli BL21(DE3); Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2024-11-15
Authors: Chengdong, H., Simin, W., Xuan, C.
PDB entry 9kme: Crystal structure of soluble bacteriorhodopsin NeuroBR_A
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-11-15
Authors: Nikolaev, A., Remeeva, A., Kapranov, I., Borshchevskiy, V., Gushchin, I.
PDB entry 9kmf: The Crystal Structure of dsPETase01 from Biortus
Classification: HYDROLASE
Source organism: Ectopseudomonas mendocina ymp
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-11-16
Authors: Wan, T., Wang, F., Lv, Z., Lin, D., Pan, W., Shang, H., Sun, J.
PDB entry 9kmg: Cryo-EM Structure of Bacteriophage FCWL1 Capsid
Classification: VIRUS
Source organism: Escherichia phage FCWL1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-11-16
Authors: Cai, C., Wang, Y., Liu, Y., Shao, Q., Wang, A., Fang, Q.
PDB entry 9kmh: The Composite Cryo-EM Structure of the Portal Vertex of Bacteriophage FCWL1
Classification: VIRAL PROTEIN
Source organism: Escherichia phage FCWL1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-11-16
Authors: Cai, C., Wang, Y., Liu, Y., Shao, Q., Wang, A., Fang, Q.
PDB entry 9kmi: Taurine bound mTAUT
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-11-16
Authors: She, J., Wang, M., He, J.
PDB entry 9kmj: Taurine bound hTAUT
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-11-16
Authors: She, J., Wang, M., He, J.
PDB entry 9kmk: apo mTAUT in inward open II state
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-11-16
Authors: She, J., Wang, M., He, J.
PDB entry 9kml: apo mTAUT in inward open I state
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-11-16
Authors: She, J., Wang, M., He, J.
PDB entry 9kmm: IAA bound mTAUT
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-16
Authors: She, J., Wang, M., He, J.
PDB entry 9kmn: Structure of hSGLT2-MAP17 complex in the substrate-bound inward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.47 Å
Deposited: 2024-11-16
Authors: Chen, L., Cui, W., Sun, Z.
PDB entry 9kmo: HR1 domain from HCoV-OC43 in complex with a pan-CoV inhibitor EK1
Classification: VIRAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-11-16
Authors: Yan, L.
PDB entry 9kmp: CRP-HCAb1 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2024-11-16
Authors: Li, Y.J.
PDB entry 9kmq: CryoEM structure of osPHT1-11 at pH 8.0
Classification: TRANSPORT PROTEIN
Source organism: Oryza sativa subsp. japonica
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-17
Authors: Du, Z.M., Guan, Z.Y., Liu, Z.
PDB entry 9kmr: Human Hsp90-PINK1 complex
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-11-17
Authors: Tian, X.Y., Su, J.Y.
PDB entry 9kms: CRP antigen-antibody2 complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2024-11-17
Authors: Li, Y.j.
PDB entry 9kmt: Bat SARSr-CoV RaTG15 Nsp1 bound to the Human 40S Ribosomal subunit-State1
Classification: RIBOSOME
Source organism: Homo sapiens; SARS bat coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2024-11-18
Authors: Yuan, S., Yan, R., Wu, M.
PDB entry 9kmu: Bat SARSr-CoV RaTG15 Nsp1 bound to the Human 40S Ribosomal subunit-State2
Classification: RIBOSOME
Source organism: Homo sapiens; SARS bat coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2024-11-18
Authors: Yuan, S., Yan, R., Wu, M.
PDB entry 9kmv: SARSr-MpCoV-GX Nsp1 bound to the Human 40S Ribosomal subunit-State1
Classification: RIBOSOME
Source organism: Homo sapiens; SARS bat coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-11-18
Authors: Yuan, S., Yan, R., Wu, M.
PDB entry 9kmw: SARSr-MpCoV-GX Nsp1 bound to the Human 40S Ribosomal subunit-State2
Classification: RIBOSOME
Source organism: Homo sapiens; SARS bat coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2024-11-18
Authors: Yuan, S., Yan, R., Wu, M.
PDB entry 9kmx: Bat MERSr-CoV NeoCoV Nsp1 bound to the Human 40S Ribosomal subunit-State1
Classification: RIBOSOME
Source organism: Homo sapiens; SARS bat coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-11-18
Authors: Yuan, S., Yan, R., Wu, M.
PDB entry 9kmy: Bat MERSr-CoV NeoCoV Nsp1 bound to the Human 40S Ribosomal subunit-State2
Classification: RIBOSOME
Source organism: Homo sapiens; Middle East respiratory syndrome-related coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-11-18
Authors: Yuan, S., Yan, R., Wu, M.
PDB entry 9kmz: Bat MERSr-CoV NL140422 Nsp1 bound to the Human 40S Ribosomal subunit-State1
Classification: RIBOSOME
Source organism: Homo sapiens; Middle East respiratory syndrome-related coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-11-18
Authors: Yuan, S., Yan, R., Wu, M.
PDB entry 9kn0: Bat MERSr-CoV NL140422 Nsp1 bound to the Human 40S Ribosomal subunit-State2
Classification: RIBOSOME
Source organism: Homo sapiens; Middle East respiratory syndrome-related coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-11-18
Authors: Yuan, S., Yan, R., Wu, M.
PDB entry 9kn1: Crystal structure of SARS-CoV-2 nucleocapsid phosphoprotein N-terminal domain(N-NTD) in complex with UMP
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.12 Å
Deposited: 2024-11-18
Authors: Higashiura, A., Yamamoto, A., Ito, H.
PDB entry 9kn2: Crystallization of zinc metalloproteinase PepO from Porphyromonas gingivalis
Classification: METAL BINDING PROTEIN
Source organism: Porphyromonas gingivalis W83
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-11-18
Authors: Feng, C.Y., Feng, C.Y.
PDB entry 9kn3: Cryo-EM structure of LptDEM complex from Escherichia coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2024-11-18
Authors: Tsukazaki, T., Kohga, H., Miyazaki, R.
PDB entry 9kn5: Structure of the human 40S ribosome complexed with HCV IRES, eIF1A and eIF3
Classification: RIBOSOME
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-11-18
Authors: Iwasaki, W., Kashiwagi, K., Sakamoto, A., Nishimoto, M., Takahashi, M., Machida, K., Imataka, H., Matsumoto, A., Shichino, Y., Iwasaki, S., Imami, K., Ito, T.
PDB entry 9kn6: Structure of the HCV IRES-dependent pre-48S translation initiation complex with eIF1A, eIF5B, and eIF3
Classification: RIBOSOME
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-18
Authors: Iwasaki, W., Kashiwagi, K., Sakamoto, A., Nishimoto, M., Takahashi, M., Machida, K., Imataka, H., Matsumoto, A., Shichino, Y., Iwasaki, S., Imami, K., Ito, T.
PDB entry 9kn7: Crystal structure of Horse spleen L-ferritin mutant (Fr-E53F/E56F/E57F/R59L/E60F/E63F)
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-18
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.
PDB entry 9kn8: Crystal structure of Horse spleen L-ferritin mutant (E53F/E56F/E57F/R59F/E60F/E63F) with Coumarin 153
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-11-18
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.
PDB entry 9kn9: NSD2-PWWP1 domain bound with compound 1.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-11-18
Authors: Huang, Y., Li, Y., Min, J.
PDB entry 9kna: NSD2-PWWP1 domain bound with compound 6
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.92 Å
Deposited: 2024-11-18
Authors: Huang, Y., Li, Y., Min, J.
PDB entry 9knb: NSD2-PWWP1 domain bound with compound 9
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2024-11-18
Authors: Huang, Y., Li, Y., Min, J.
PDB entry 9knc: Crystal structure of human ERRg LBD in complex with 6-nitroindole
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-11-18
Authors: Xu, T., Wang, N., Liu, J.
PDB entry 9knd: Crystal structure of human ERRg LBD in complex with indole
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2024-11-18
Authors: Xu, T., Wang, N., Liu, J.
PDB entry 9kne: Crystal structure of human ERRg LBD in complex with 5-nitroindole
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-11-18
Authors: Xu, T., Wang, N., Liu, J.
PDB entry 9knf: Crystal structure of human ERRg LBD in complex with 4028691
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2024-11-18
Authors: Xu, T., Wang, N., Liu, J.
PDB entry 9kng: Crystal structure of human ERRg LBD in complex with 4034496
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-18
Authors: Xu, T., Wang, N., Liu, J.
PDB entry 9knh: Structural complex of FTO bound with Dac590
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-11-18
Authors: Yang, C.G., Yang, T.
PDB entry 9kni: Structural complex of FTO bound with 12j
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2024-11-19
Authors: Yang, C.G., Gan, J.H.
PDB entry 9knj: Crystal structure of glycerol-bound full-length PHA synthase (PhaC) from Aeromonas caviae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aeromonas caviae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-11-19
Authors: Chek, M.F., Kim, S.Y., Mori, T., Hakoshima, T.
PDB entry 9knk: Crystal structure of full-length PHA synthase (PhaC) from Aeromonas caviae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aeromonas caviae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2024-11-19
Authors: Chek, M.F., Kim, S.Y., Mori, T., Hakoshima, T.
PDB entry 9knl: Crystal structure of triethylene glycol-bound full-length PHA synthase (PhaC) from Aeromonas caviae
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aeromonas caviae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-11-19
Authors: Chek, M.F., Kim, S.Y., Mori, T., Hakoshima, T.
PDB entry 9knp: X-ray structure of Pyrococcus horikoshii OT3 alcohol dehydrogenase
Classification: METAL BINDING PROTEIN
Source organism: Pyrococcus horikoshii OT3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2024-11-19
Authors: Kamitori, S., Nakamura, N.
PDB entry 9knq: Measles virus L-P complex in apo state
Classification: TRANSCRIPTION
Source organism: Measles virus strain Ichinose-B95a
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-11-19
Authors: Wang, Y.R., Zhang, H.Q.
PDB entry 9kns: Crystal structure of Hook3(553-624)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.699 Å
Deposited: 2024-11-19
Authors: Ku, B., Lee, H.S.
PDB entry 9knt: ERDRP-0519-bound measles virus L-P complex
Classification: TRANSCRIPTION
Source organism: Measles virus strain Ichinose-B95a
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-11-19
Authors: Wang, Y.R., Zhang, H.Q.
PDB entry 9knu: Neck structure of bacteriophage Mu in contracted state
Classification: VIRAL PROTEIN
Source organism: Escherichia phage Mu
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-11-19
Authors: Liu, H.R., Zhou, J.Q.
PDB entry 9knv: AS-136A-bound measles virus L-P complex
Classification: TRANSCRIPTION
Source organism: Measles virus strain Ichinose-B95a
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-19
Authors: Wang, Y.R., Zhang, H.Q.
PDB entry 9knw: Cryo-EM structure of apo human mitochondrial pyruvate carrier in the IMS-open conformation at pH 6.8
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.41 Å
Deposited: 2024-11-19
Authors: Shi, J.H., Liang, J.M., Ma, D.
PDB entry 9knx: Cryo-EM structure of human mitochondrial pyruvate carrier in the occluded conformation at pH 6.8
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.72 Å
Deposited: 2024-11-19
Authors: Shi, J.H., Liang, J.M., Ma, D.
PDB entry 9kny: Cryo-EM structure of pyruvate-treated human mitochondrial pyruvate carrier in the IMS-open conformation at pH 8.0
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-11-19
Authors: Shi, J.H., Liang, J.M., Ma, D.
PDB entry 9knz: ERDRP-0519-bound Nipah virus L-P complex
Classification: TRANSCRIPTION
Source organism: Henipavirus nipahense
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-11-19
Authors: Wang, Y.R., Zhang, H.Q.
PDB entry 9ko2: A Cryo_EM structure of CCR7 complex with CCL19
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2024-11-19
Authors: Yuan, Q., Duan, J., Cao, Y.
PDB entry 9ko3: Crystal structure of Agrobacterium tumefaciens PmtA with SAH
Classification: TRANSFERASE
Source organism: Agrobacterium tumefaciens (strain C58)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-11-19
Authors: Watanabe, Y.
PDB entry 9ko4: A Cryo_EM structure of CCR7 complex with CCL21
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-19
Authors: Yuan, Q., Duan, J., Cao, Y.
PDB entry 9ko5: Crystal structure of Agrobacterium tumefaciens PmtA with 5'-methylthioadenosine
Classification: TRANSFERASE
Source organism: Agrobacterium tumefaciens (strain C58)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-11-19
Authors: Watanabe, Y.
PDB entry 9ko6: A local Cryo_EM structure of CCR7 complex with CCL19
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-11-20
Authors: Yuan, Q., Duan, J., Cao, Y.
PDB entry 9ko7: Crystal structure of chicken ACE2
Classification: MEMBRANE PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.27 Å
Deposited: 2024-11-20
Authors: Lan, J., Wang, C.H.
PDB entry 9ko8: Crystal structure of Hook3(553-624) bound to KIF1C(714-809)
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-11-20
Authors: Ku, B., Lee, H.S.
PDB entry 9ko9: Cryo-EM structure of PsCas9-sgRNA binary complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Parasutterella secunda
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-11-20
Authors: Shen, P.P., Lu, X.Y., Huang, J.-W., Chen, C.-C., Gut, R.-T.
PDB entry 9kod: Neuraminidase of A/dairy cow/Minnesota/24_016288-003/2024 (dcMN24 N1) in complex with CAV-F6 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2024-11-20
Authors: Wang, X., Ge, J., Li, X.
PDB entry 9koe: X-ray crystallography of ascorbate peroxidase APEX2
Classification: OXIDOREDUCTASE
Source organism: Glycine max
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-11-20
Authors: Ke, M., Tian, R.J.
PDB entry 9koi: Crystal structure of ExaC, an NAD+-dependent aldehyde dehydrogenase, from Pseudomonas aeruginosa
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-11-20
Authors: Lee, J.Y., Ko, J.H., Jeong, K.H., Son, S.B.
PDB entry 9koj: Crystal structure of the isomerase Art22
Classification: ISOMERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.445 Å
Deposited: 2024-11-20
Authors: Guo, L., Li, P.W., Li, D.F., Chen, Y.H.
PDB entry 9kok: Crystal structure of ExaC, an NAD+-dependent aldehyde dehydrogenase, from Pseudomonas aeruginosa
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-11-20
Authors: Lee, J.Y., Ko, J.H., Jeong, K.H., Son, S.B.
PDB entry 9kol: Crystal structure of a Ruthenium and Copper-substituted small laccase
Classification: OXIDOREDUCTASE
Source organism: Streptomyces coelicolor A3(2)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-11-20
Authors: Yang, X., Fan, S., Liu, J., Wu, W., Chen, X., Ji, W., Li, S., Xue, Y., Sun, X., Wang, M., Wu, F., Yu, P., Mao, L.
PDB entry 9kom: Cryo-EM structure of human pannexin-3 protomer
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-11-20
Authors: Tsuyama, T., Yokoyama, K.
PDB entry 9kon: Solid-state NMR Structure of VsSemiSWEET in Lipid Bilayers
Classification: MEMBRANE PROTEIN
Source organism: Vibrio sp. (strain N418)
Experimental method: SOLID-STATE NMR
Deposited: 2024-11-20
Authors: Zhang, Y., Yang, J.
PDB entry 9koo: Ligand binding domain of Pseudomonas Aeruginosa PAO1 chemoreceptor PctA in complex with MHF
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-11-21
Authors: Songying, O., Yanbo, Z., Lei, Z., Xinyu, Q.
PDB entry 9kop: Crystal structure of the Trove domain
Classification: RNA BINDING PROTEIN
Source organism: Thermus phage phiLo
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-11-21
Authors: Hu, Z., Huang, Y.
PDB entry 9koq: Crystal structure of an Arylsulfatase from Enterococcus faecium
Classification: METAL BINDING PROTEIN
Source organism: Enterococcus faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-11-21
Authors: Guo, L., Huang, Y.
PDB entry 9kor: Cryo-EM structure of PsCas9-sgRNA-dsDNA ternary complex
Classification: RNA BINDING PROTEIN/DNA/RNA
Source organism: Parasutterella secunda
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-11-21
Authors: Shen, P.P., Lu, X.Y., Huang, J.-W., Chen, C.-C., Guo, R.-T.
PDB entry 9kos: Crystal structure of RaTG13 RBD complexed with sheep ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Bat coronavirus RaTG13; Ovis aries
Experimental method: X-RAY DIFFRACTION
Resolution: 3.74 Å
Deposited: 2024-11-21
Authors: Lan, J., Wang, C.H.
PDB entry 9kot: HEWL crystal soaked in buffer of pH2.0
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-21
Authors: Hosur, M.V.
PDB entry 9kou: CryoEM structure of osPHT1-11 at pH 5.0
Classification: TRANSPORT PROTEIN
Source organism: Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-11-21
Authors: Du, Z.M., Guan, Z.Y., Liu, Z.
PDB entry 9kov: Crystal structure of an amidohydrolase mutant from Thermonema
Classification: HYDROLASE
Source organism: Pyrinomonas methylaliphatogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2024-11-21
Authors: Xu, N.N., Jian, G., Wei, H.L., Chen, Y.Y., Wu, P., Han, X., Liu, W.
PDB entry 9kow: Crystal structure of RaTG13 RBD complexed with cattle ACE2
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Bat coronavirus RaTG13; Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.98 Å
Deposited: 2024-11-21
Authors: Lan, J., Wang, C.H.
PDB entry 9kox: human Hsp90-FKBP51-PINK1 complex
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.43 Å
Deposited: 2024-11-21
Authors: Tian, X.Y., Su, J.Y.
PDB entry 9koy: Crystal structure of Oryza sativa HPPD complexed with iptriazopyrid
Classification: OXIDOREDUCATASE/INHIBITOR
Source organism: Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-11-22
Authors: Nishio, T., Nishijima, N., Kubota, T., Furuhata, Y., Kato, Y.
PDB entry 9koz: Crystal structure of Arabidopsis thaliana HPPD complexed with iptriazopyrid
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-11-22
Authors: Nishio, T., Nishijima, N., Kubota, T., Furuhata, Y., Kato, Y.
PDB entry 9kp0: Crystal structure of Oryza sativa HPPD
Classification: OXIDOREDUCTASE
Source organism: Oryza sativa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-11-22
Authors: Nishio, T., Nishijima, N., Kubota, T., Furuhata, Y., Kato, Y.
PDB entry 9kp1: Heterodimer of heptaprenyl diphosphate synthase from B. subtilis
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.484 Å
Deposited: 2024-11-22
Authors: Luo, S., Liu, Z.C., Wang, G.G.
PDB entry 9kp2: Crystal structure of Horse spleen L-ferritin mutant (E56F/R59F) with Nile Red
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-22
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.
PDB entry 9kp3: Ligand binding domain of Pseudomonas Aeruginosa PAO1 chemoreceptor TlpQ in complex with MHF
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2024-11-22
Authors: Songying, O., Yanbo, Z., Lei, Z., Xinyu, Q.
PDB entry 9kp4: Crystal structure of human CASTOR1 in apo form
Classification: SIGNALING PROTEIN
Source organism: Escherichia coli (strain K12); Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2024-11-22
Authors: Liu, C., Ding, J., Zhang, T.
PDB entry 9kp5: Crystal structure of Horse spleen L-ferritin mutant (E56F/R59F)
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-22
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.
PDB entry 9kp6: Cryo-EM structure of mouse bestrophin-1 in a closed state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-11-22
Authors: Lim, H.H., Kim, K.W., Ko, A.
PDB entry 9kp7: Crystal structure of Horse spleen L-ferritin mutant (R59F) with Nile Red
Classification: METAL BINDING PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-11-22
Authors: Suzuki, T., Hishikawa, Y., Maity, B., Abe, S., Ueno, T.