LiteFold/PDB huggingface dataset:
PDB entry 8bzi: Human MST3 (STK24) kinase in complex with inhibitor MR39
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2022-12-14
Authors: Balourdas, D.I., Rak, M., Tesch, R., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8bzj: Human MST3 (STK24) kinase in complex with inhibitor MRLW5
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.52 Å
Deposited: 2022-12-14
Authors: Balourdas, D.I., Rak, M., Tesch, R., Knapp, S., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 8bzk: Crystal structure of Paradendryphiella salina PL7C alginate lyase with sulphate bound in the active site
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-12-15
Authors: Wilkens, C.
PDB entry 8bzl: Human 20S Proteasome in complex with peptide activator peptide BLM42
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2022-12-15
Authors: Henneberg, F., Chari, A., Jankowska, E., Witkowska, J.
PDB entry 8bzm: FOXK1-ELF1-heterodimer bound to DNA
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2022-12-15
Authors: Morgunova, E., Popov, A., Yin, Y., Taipale, J.
PDB entry 8bzn: SARS-CoV-2 non-structural protein 10 (nsp10) variant T102I
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2022-12-15
Authors: Wang, H., Rizvi, S.R.A., Dong, D., Lou, J., Wang, Q., Sopipong, W., Najar, F., Agarwal, P.K., Kozielski, F., Haider, S.
PDB entry 8bzo: Cryo-EM structure of CDK2-CyclinA in complex with p27 from the SCFSKP2 E3 ligase Complex
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-12-15
Authors: Rowland, R.J., Salamina, M., Endicott, J.A., Noble, M.E.
PDB entry 8bzp: JNK3 (Mitogen-activated protein kinase 10) in Complex with Compound 23 bearing a C(sp3)F2Br moiety
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2022-12-15
Authors: Stahlecker, J., Vaas, S., Stehle, T., Boeckler, F.M.
PDB entry 8bzq: Beta-1,4-D-endoglucanase Cel45A from Gloeophyllum trabeum
Classification: HYDROLASE
Source organism: Gloeophyllum trabeum ATCC 11539
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-12-15
Authors: Okmane, L., Fitkin, L., Stahlberg, J.
PDB entry 8bzr: UFC1-UFM1 conjugate
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.781 Å
Deposited: 2022-12-15
Authors: Magnussen, H.M., Kulathu, Y.
PDB entry 8bzs: The crystal structure of glycogen phosphorylase in complex with baicalein
Classification: TRANSFERASE
Source organism: Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-12-15
Authors: Koulas, S.M., Mathomes, R., Hayes, J.M., Leonidas, D.D.
PDB entry 8bzt: FC-NAg stabilizer of 14-3-3 and ERalpha
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-12-15
Authors: Visser, E.J., Ottmann, C.
PDB entry 8bzu: Double-ion dependent DNA quadruplex structure formed by C.elegans telomeric sequence
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2022-12-15
Authors: Lenarcic Zivkovic, M., Trantirek, L.
PDB entry 8bzv: SARS-CoV-2 nsp10-16 methyltransferase in complex with adenosine
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-12-15
Authors: Kremling, V., Sprenger, J., Oberthuer, D.
PDB entry 8bzw: Co-soaked stabilizers for ERa - 14-3-3 interaction (844_AZ210)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-12-15
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8bzx: 1-deoxy-D-xylulose 5-phosphate synthase from Klebsiella pneumoniae (kpDXPS),co-crystal with thiamine monophosphate analog
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-12-15
Authors: Hamid, R.
PDB entry 8bzy: Structure of SLC40/ferroportin in complex with vamifeport and synthetic nanobody Sy3 in occluded conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2022-12-15
Authors: Lehmann, E.F., Liziczai, M., Drozdzyk, K., Dutzler, R., Manatschal, C.
PDB entry 8bzz: Crystal structure of carbonic anhydrase 2 4-(dimethylamino)-N-nitrobenzenesulfonamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2022-12-15
Authors: Angeli, A., Ferraroni, M.
PDB entry 8c00: Enp1TAP-S21_A population of yeast small ribosomal subunit precursors depleted of rpS21/eS21
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-12-15
Authors: Milkereit, P., Poell, G.
PDB entry 8c01: Enp1TAP_A population of yeast small ribosomal subunit precursors
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-12-15
Authors: Milkereit, P., Poell, G.
PDB entry 8c02: Structure of SLC40/ferroportin in complex with synthetic nanobody Sy3 in occluded conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.09 Å
Deposited: 2022-12-15
Authors: Lehmann, E.F., Liziczai, M., Drozdzyk, K., Dutzler, R., Manatschal, C.
PDB entry 8c03: Structure of SLC40/ferroportin in complex with vamifeport and synthetic nanobody Sy12 in outward-facing conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.89 Å
Deposited: 2022-12-15
Authors: Lehmann, E.F., Liziczai, M., Drozdzyk, K., Dutzler, R., Manatschal, C.
PDB entry 8c04: Co-soaked stabilizers for ERa - 14-3-3 interaction (884_AZ354)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-12-15
Authors: Visser, E.J., Sijbesma, E., Ottmann, C.
PDB entry 8c05: LOV-activated diguanylate cyclase, dark-state structure
Classification: FLAVOPROTEIN
Source organism: Methylotenera sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-12-15
Authors: Vide, U., Winkler, A.
PDB entry 8c06: Structure of Dimeric HECT E3 Ubiquitin Ligase UBR5
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-12-16
Authors: Hehl, L.A., Prabu, J.R., Schulman, B.A.
PDB entry 8c07: Structure of HECT E3 UBR5 forming K48 linked Ubiquitin chains
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-12-16
Authors: Hehl, L.A., Prabu, J.R., Schulman, B.A.
PDB entry 8c08: Crystal structure of JAK2 JH2-K539L
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-16
Authors: Haikarainen, T.
PDB entry 8c09: Crystal structure of JAK2 JH2-I559F
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-12-16
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8c0a: Crystal structure of JAK2 JH2-R683S
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-16
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8c0b: CryoEM structure of Aspergillus nidulans UTP-glucose-1-phosphate uridylyltransferase
Classification: SUGAR BINDING PROTEIN
Source organism: Aspergillus nidulans FGSC A4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Deposited: 2022-12-16
Authors: Han, X., D Angelo, C., Otamendi, A., Cifuente, J.O., de Astigarraga, E., Ochoa-Lizarralde, B., Grininger, M., Routier, F.H., Guerin, M.E., Fuehring, J., Etxebeste, O., Connell, S.R.
PDB entry 8c0c: X-ray crystal structure of PPAR gamma ligand binding domain in complex with CZ46
Classification: NUCLEAR PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-16
Authors: Capelli, D., Montanari, R., Pochetti, G., Villa, S., Meneghetti, F.
PDB entry 8c0d: UFL1/DDRGK1 bound to UFC1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.564 Å
Deposited: 2022-12-16
Authors: Magnussen, H.M., Kulathu, Y.
PDB entry 8c0e: The lipid linked oligosaccharide polymerase Wzy and its regulating co-polymerase Wzz form a complex in vivo and in vitro
Classification: MEMBRANE PROTEIN
Source organism: Pectobacterium atrosepticum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-12-16
Authors: Weckener, M., Woodward, L.S., Clarke, B.R., Liu, H., Ward, P.N., Le Bas, A., Bhella, D., Whitfield, C., Naismith, J.H.
PDB entry 8c0f: Tubulin-PTC596 complex
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1005 Å
Deposited: 2022-12-16
Authors: Prota, A.E., Muehlethaler, T., Weetall, M., Steinmetz, M.O.
PDB entry 8c0g: SARS-CoV nsp16-nsp10 complexed with N7-GTP
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome-related coronavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2022-12-16
Authors: Ferron, F., Debarnot, C., Coutard, B., Canard, B., Marseilles Structural Genomics Program @ AFMB (MSGP)
PDB entry 8c0i: Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200L (acyl-enzyme intermediate)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-12-16
Authors: Sciuk, A., Jaskolski, M., Loch, J.I.
PDB entry 8c0j: Structure of AmiB enzymatic domain bound to the EnvC LytM domain
Classification: HYDROLASE
Source organism: Citrobacter rodentium
Experimental method: X-RAY DIFFRACTION
Resolution: 3.381 Å
Deposited: 2022-12-17
Authors: Crow, A.
PDB entry 8c0k: fragment-linked stabilizer for ERa - 14-3-3 interaction (1075302)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-12-17
Authors: Visser, E.J., Vandenboorn, E.M.F., Ottmann, C.
PDB entry 8c0l: FC-THF stabilizer of 14-3-3 and ERalpha
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-17
Authors: Visser, E.J., Ottmann, C.
PDB entry 8c0m: Crystal structure of Paradendryphiella salina PL7C alginate lyase mutant Y220F
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-12-18
Authors: Wilkens, C.
PDB entry 8c0n: Crystal structure of the red form of the mTagFT fluorescent timer
Classification: FLUORESCENT PROTEIN
Source organism: Entacmaea quadricolor
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-12-19
Authors: Boyko, K.M., Nikolaeva, A.Y., Vlaskina, A.V., Agapova, Y.K., Subach, O.M., Popov, V.O., Subach, F.V.
PDB entry 8c0o: African cichlid nackednavirus capsid at pH 5.5
Classification: VIRAL PROTEIN
Source organism: African cichlid nackednavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-12-19
Authors: Pfister, S., Rabl, J., Boehringer, D., Meier, B.H.
PDB entry 8c0p: Crystal structure of S. aureus BlaR1 sensor domain in complex with a boronate inhibitor
Classification: SIGNALING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-12-19
Authors: Miguel-Ruano, V., Jimenez-Faraco, E., Hermoso, J.A.
PDB entry 8c0q: Crystal structure of human carbonic anhydrase II in complex with a coumarin derivative.
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2022-12-19
Authors: Alterio, V., De Simone, G., Esposito, D.
PDB entry 8c0r: Crystal structure of human carbonic anhydrase II in complex with a coumarin derivative.
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-12-19
Authors: Alterio, V., De Simone, G., Esposito, D.
PDB entry 8c0s: Crystal structure of S. aureus BlaR1 sensor domain in complex with an imidazole inhibitor
Classification: SIGNALING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-19
Authors: Miguel-Ruano, V., Hermoso, J.A.
PDB entry 8c0t: NRS 1.2: Fluorescent Sensors for Imaging Interstitial Calcium
Classification: BIOSYNTHETIC PROTEIN
Source organism: Branchiostoma lanceolatum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2022-12-19
Authors: Basquin, J., Griesbeck, O., Valiente-Gabioud, A.
PDB entry 8c0u: 1,6-anhydro-n-actetylmuramic acid kinase (AnmK) in complex with their natural substrates and products
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.112 Å
Deposited: 2022-12-19
Authors: Jimenez-Faraco, E., Hermoso, J.A.
PDB entry 8c0v: Structure of the peroxisomal Pex1/Pex6 ATPase complex bound to a substrate in single seam state
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-12-19
Authors: Ruettermann, M., Koci, M., Lill, P., Geladas, E.D., Kaschani, F., Klink, B.U., Erdmann, R., Gatsogiannis, C.
PDB entry 8c0w: Structure of the peroxisomal Pex1/Pex6 ATPase complex bound to a substrate in twin seam state
Classification: TRANSLOCASE
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2022-12-19
Authors: Ruettermann, M., Koci, M., Lill, P., Geladas, E.D., Kaschani, F., Klink, B.U., Erdmann, R., Gatsogiannis, C.
PDB entry 8c0y: SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2022-12-19
Authors: Das, H., Hallberg, B.M.
PDB entry 8c0z: CryoEM structure of a tungsten-containing aldehyde oxidoreductase from Aromatoleum aromaticum
Classification: OXIDOREDUCTASE
Source organism: Aromatoleum aromaticum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2022-12-19
Authors: Winiarska, A., Ramirez-Amador, F., Hege, D., Gemmecker, Y., Prinz, S., Hochberg, G., Heider, J., Szaleniec, M., Schuller, J.M.
PDB entry 8c10: Biochemical and structural characterisation of an alkaline family GH5 cellulase from a shipworm symbiont
Classification: HYDROLASE
Source organism: Teredinibacter waterburyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2022-12-19
Authors: Leiros, I., Vaaje-Kolstad, G.
PDB entry 8c11: BRD4 in complex with 2-(2-(4-(3,5-dimethylisoxazol-4-yl)-1H-pyrazol-1-yl)acetamido)-N-ethylpropanamide
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-12-19
Authors: Martin, M.P., Noble, M.E.N.
PDB entry 8c12: Identification of an intermediate activation state of PAK5 reveals a novel mechanism of kinase inhibition.
Classification: TRANSFERASE
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.549 Å
Deposited: 2022-12-19
Authors: Martin, H.L., Turner, A.L., Trinh, C.H., Bayliss, R.W., Tomlinson, D.C.
PDB entry 8c13: Crystal structure of pVHL:ElonginC:ElonginB complex bound to PROTAC JW48
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-12-20
Authors: Kraemer, A., Weckesser, J., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8c14: Aurora A kinase in complex with TPX2-inhibitor 9
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c15: Aurora A kinase in complex with TPX2-inhibitor 3
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.41 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c16: Crystal structure of asymmetric ferredoxin/flavodoxin NADP+ oxidoreductase 2 (FNR2) H326V mutant from Bacillus cereus
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 4.2 Å
Deposited: 2022-12-20
Authors: Rugtveit, A.K., Hammerstad, M., Hersleth, H.-P.
PDB entry 8c17: Crystal structure of TEAD4 in complex with peptide 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-12-20
Authors: Scheufler, C., Kallen, J.
PDB entry 8c18: Solution structure of carotenoid-binding protein AstaPo1 in complex with astaxanthin
Classification: TRANSPORT PROTEIN
Source organism: Coelastrella astaxanthina
Experimental method: SOLUTION NMR
Deposited: 2022-12-20
Authors: Kornilov, F.D., Savitskaya, A.G., Slonimskiy, Y.B., Goncharuk, S.A., Sluchanko, N.N., Mineev, K.S.
PDB entry 8c19: SARS-CoV-2 NSP3 macrodomain in complex with 1-methyl-4-[5-(morpholin-4-ylcarbonyl)-2-furyl]-1H-pyrrolo[2,3-b]pyridine
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-12-20
Authors: Schuller, M., Ahel, I.
PDB entry 8c1a: SARS-CoV-2 NSP3 macrodomain in complex with aztreonam
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-12-20
Authors: Schuller, M., Ahel, I.
PDB entry 8c1b: Focused map for structure of IgE bound to the ectodomain of FceRIa
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-12-20
Authors: Andersen, G.R., Jensen, R.K.
PDB entry 8c1c: Structure of IgE bound to the ectodomain of FceRIa
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-12-20
Authors: Andersen, G.R., Jensen, R.K.
PDB entry 8c1d: Aurora A kinase in complex with TPX2-inhibitor 9
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.115 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c1e: Aurora A kinase in complex with TPX2-inhibitor 9
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.798 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c1f: Aurora A kinase in complex with TPX2-inhibitor 6
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.924 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c1g: Aurora A kinase in complex with TPX2-inhibitor 7
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c1h: Aurora A kinase in complex with TPX2-inhibitor 8
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.233 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c1i: Aurora A kinase in complex with TPX2-inhibitor 10
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c1j: Crystal Structure of Mus musculus Protein Arginine Methyltransferase 2 in complex with RSF1_18-30
Classification: TRANSFERASE
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-20
Authors: Cura, V., Troffer-Charlier, N., Marechal, N., Bonnefond, L., Cavarelli, J.
PDB entry 8c1k: Aurora A kinase in complex with TPX2-inhibitor CAM2602
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c1l: Crystal structure of HNF4 alpha LBD in complexes with palmitic acid and GRIP-1 peptide
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-20
Authors: Ni, X., Merk, D., Zhubi, R., Knapp, S., Structural Genomics Consortium (SGC)
PDB entry 8c1m: Aurora A kinase in complex with TPX2-inhibitor 2
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2022-12-20
Authors: Fischer, G., Rocaboy, M., Blaszczyk, B., Moschetti, T., Wang, X., Scott, D.E., Coyne, A.G., Dagostin, C., Rooney, T., Bayly, A., Feng, J., Asteian, A., Alcaide-Lopez, A., Stockwell, S., Skidmore, J., Venkitaraman, A.R., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 8c1n: FMDV 3D polymerase in complex with 3B1 protein solved in P212121 space group
Classification: VIRAL PROTEIN
Source organism: Foot-and-mouth disease virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-20
Authors: Ferrer-Orta, C., Veraguer, N.
PDB entry 8c1p: Active state homomeric GluA1 AMPA receptor in complex with TARP gamma 3
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-12-21
Authors: Zhang, D., Ivica, J., Krieger, J.M., Ho, H., Yamashita, K., Cais, O., Greger, I.
PDB entry 8c1q: Resting state homomeric GluA1 AMPA receptor in complex with TARP gamma 3
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2022-12-21
Authors: Zhang, D., Ivica, J., Krieger, J.M., Ho, H., Yamashita, K., Cais, O., Greger, I.
PDB entry 8c1r: Resting state homomeric GluA2 F231A mutant AMPA receptor in complex with TARP gamma-2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-12-21
Authors: Zhang, D., Ivica, J., Krieger, J.M., Ho, H., Yamashita, K., Cais, O., Greger, I.
PDB entry 8c1s: Transmembrane domain of resting state homomeric GluA2 F231A mutant AMPA receptor in complex with TARP gamma 2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-12-21
Authors: Zhang, D., Ivica, J., Krieger, J.M., Ho, H., Yamashita, K., Cais, O., Greger, I.
PDB entry 8c1t: Crystal structure of Trichoplax Dlg PDZ1 domain in complex with Trichoplax Vangl peptide
Classification: PROTEIN BINDING
Source organism: Trichoplax sp. H2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-21
Authors: Maddumage, J.C., Kvansakul, M.
PDB entry 8c1u: SFX structure of D.m(6-4)photolyase
Classification: FLAVOPROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-12-21
Authors: Cellini, A., Kumar, M., Nimmrich, A., Mutisya, J., Furrer, A., Beale, E.V., Carrillo, M., Malla, T.N., Maj, P., Dworkowskic, F., Cirelli, C., Ozerovi, D., Bacellar, C., Strandfuss, J., Weinert, T., Ihalainen, J.A., Yuan Wahlgren, W., Westenhoff, S.
PDB entry 8c1v: SARS-CoV-2 S-trimer (3 RBDs up) bound to TriSb92, fitted into cryo-EM map
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-12-21
Authors: Huiskonen, J.T., Rissanen, I., Hannula, L.
PDB entry 8c1w: Tetrameric 5-HT3A receptor in Salipro (apo, asymmetric)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-12-21
Authors: Introini, B., Kudryashev, M.
PDB entry 8c1x: sfGFP C148 F206 mutant
Classification: SIGNALING PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-12-21
Authors: Ahmed, R.D., Rizkallah, P.J., Jones, D.D.
PDB entry 8c1y: Small molecule stabilizer for 14-3-3/ChREBP (Cmd 30)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-12-21
Authors: Pennings, M.A.M., Visser, E.J., Ottmann, C.
PDB entry 8c1z: Tetrameric 5-HT3aR in Salipro (apo state, symmetric)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-12-21
Authors: Introini, B., Kudryashev, M.
PDB entry 8c20: Tetrameric 5-HT3aR in Salipro (holo state, symmetric)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-12-21
Authors: Introini, B., Kudryashev, M.
PDB entry 8c21: Tetrameric 5-HT3A receptor in Salipro (holo, asymmetric)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-12-21
Authors: Introini, B., Kudryashev, M.
PDB entry 8c23: Structure of E. coli Class 2 L-asparaginase EcAIII, mutant M200T (monoclinic form M200T#m)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.842 Å
Deposited: 2022-12-21
Authors: Sciuk, A., Ruszkowski, M., Jaskolski, M., Loch, J.I.
PDB entry 8c24: ParDE1 toxin-antitoxin complex from Mycobacterium tuberculosis (rv1960c-rv1959c)
Classification: TOXIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-21
Authors: Beck, I.N., Blower, T.R.
PDB entry 8c25: purine nucleoside phosphorylase in complex with JS-375
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-12-21
Authors: Djukic, S., Pachl, P., Rezacova, P.
PDB entry 8c26: ParDE2 toxin-antitoxin complex from Mycobacterium tuberculosis (rv2142A-rv2142c)
Classification: TOXIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-12-21
Authors: Beck, I.N., Blower, T.R.
PDB entry 8c27: Domain 3 of Group B Streptococcus pilus protein as scaffold for the display of foreign epitopes
Classification: MEMBRANE PROTEIN
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2022-12-21
Authors: Veggi, D., Cappelli, L., Cozzi, R.
PDB entry 8c28: 14-3-3 in complex with PyrinpS208pS242
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-21
Authors: Lau, R., Ottmann, C., Hann, M.
PDB entry 8c29: Cryo-EM structure of photosystem II C2S2 supercomplex from Norway spruce (Picea abies) at 2.8 Angstrom resolution
Classification: MEMBRANE PROTEIN
Source organism: Picea abies
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.785 Å
Deposited: 2022-12-21
Authors: Kopecny, D., Semchonok, D.A., Kouril, R.
PDB entry 8c2d: 14-3-3 in complex with Pyrin pS208
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-12-22
Authors: Lau, R., Ottmann, C., Hann, M.
PDB entry 8c2e: Structure of 14-3-3 sigma delta C with electrophilic peptide 4IEA-5
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-22
Authors: van den Oetelaar, M.C.M., Ottmann, C.
PDB entry 8c2f: Structure of 14-3-3 sigma delta C with electrophilic peptide 3MHR-5
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-12-22
Authors: van den Oetelaar, M.C.M., Ottmann, C.
PDB entry 8c2g: 14-3-3 sigma with Pin1 binding site pS72 and covalently bound CV1040
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-22
Authors: Verhoef, C.J., Cossar, P.
PDB entry 8c2h: Transmembrane domain of active state homomeric GluA1 AMPA receptor in tandem with TARP gamma 3
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2022-12-22
Authors: Zhang, D., Ivica, J., Krieger, J.M., Ho, H., Yamashita, K., Cais, O., Greger, I.
PDB entry 8c2i: Transmembrane domain of resting state homomeric GluA1 AMPA receptor in complex with TARP gamma 3
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2022-12-22
Authors: Zhang, D., Ivica, J., Krieger, J.M., Ho, H., Yamashita, K., Cais, O., Greger, I.
PDB entry 8c2o: Structure of E. coli AmiA
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-12-22
Authors: Baverstock, T.C., Crow, A.
PDB entry 8c2p: FMDV 3D polymerase in complex with 3B3
Classification: VIRAL PROTEIN
Source organism: Foot-and-mouth disease virus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-12-22
Authors: Ferrer-Orta, C., Veraguer, N.
PDB entry 8c2q: Silver ion-bound structure of the silver specific chaperone SilF needed for bacterial silver resistance
Classification: METAL BINDING PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium
Experimental method: SOLUTION NMR
Deposited: 2022-12-22
Authors: Monneau, Y.R., Walker, O., Hologne, M.
PDB entry 8c2r: SARS-CoV2 Omicron BA.1 spike in complex with CAB-A17 antibody
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2022-12-22
Authors: Das, H., Hallberg, B.M.
PDB entry 8c2s: Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 1).
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2022-12-22
Authors: Yin, Z., Bridges, H.R., Agip, A.N.A., Hirst, J.
PDB entry 8c2y: 14-3-3 in complex with Pyrinp pS242
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2022-12-23
Authors: Lau, R., Ottmann, C., Hann, M.
PDB entry 8c2z: Crystal structure of DYRK1B in complex with AZ191
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2022-12-23
Authors: Grygier, P., Pustelny, K., Dubin, G., Czarna, A.
PDB entry 8c30: Crystal structure of 14-3-3 in complex with PyrinpS242 and a protein/peptide interface fragment
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-12-23
Authors: Lau, R., Ottmann, C.
PDB entry 8c31: Dark state 1.8 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under aerobic condition
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-12-23
Authors: Poddar, H., Leys, D.
PDB entry 8c32: Dark state 2.2 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under anaerobic condition
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-12-23
Authors: Poddar, H., Leys, D.
PDB entry 8c33: Anaerobic light exposed 2.25 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-12-23
Authors: Poddar, H., Leys, D.
PDB entry 8c34: Aerobic light exposed 1.8 Angstrom crystal structure of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2022-12-23
Authors: Poddar, H., Leys, D.
PDB entry 8c35: Dark state 2.1 Angstrom crystal structure of H132A variant of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-23
Authors: Poddar, H., Leys, D.
PDB entry 8c36: Light-adapted 2.0 Angstrom crystal structure of H132A variant of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under aerobic conditions
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus HB27
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-23
Authors: Poddar, H., Leys, D.
PDB entry 8c37: An intermediate light exposed 2.15 Angstrom crystal structure of H132A variant of cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under anaerobic conditions
Classification: TRANSCRIPTION
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-12-23
Authors: Poddar, H., Leys, D.
PDB entry 8c38: Contracted cowpea chlorotic mottle virus
Classification: VIRUS
Source organism: Cowpea chlorotic mottle virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.64 Å
Deposited: 2022-12-23
Authors: Harder, O.F., Barrass, S.V., Drabbels, M., Lorenz, U.J.
PDB entry 8c39: X-ray structure of HEWL upon reaction with a Ruthenium(II)-arene Complexed with Glycosylated Carbene Ligands (5)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-12-23
Authors: Ferraro, G., Merlino, A.
PDB entry 8c3a: Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
Classification: RIBOSOME
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-12-23
Authors: Kolosova, O., Zgadzay, Y., Yusupov, M.
PDB entry 8c3b: X-ray structure of RNase A upon reaction with a Ruthenium(II)-arene Complexed with Glycosylated Carbene Ligands (5)
Classification: RNA BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2022-12-23
Authors: Ferraro, G., Merlino, A.
PDB entry 8c3c: 14-3-3 sigma with Pin1 binding site pS72 and bound Fusicoccin A
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-23
Authors: Verhoef, C.J., Cossar, P.
PDB entry 8c3d: Sulfonated Calpeptin is a promising drug candidate against SARS-CoV-2 infections
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-12-23
Authors: Loboda, J., Karnicar, K., Lindic, N., Usenik, A., Lieske, J., Meents, A., Guenther, S., Reinke, P.Y.A., Falke, S., Ewert, W., Turk, D.
PDB entry 8c3e: Engineered mini-protein LCB2 (blocking ligand of SARS-Cov-2 spike protein)
Classification: ANTIVIRAL PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-23
Authors: Korban, S.A., Mikhailovskii, O.V., Luzik, D.A., Gurzhiy, V.V., Levkina, A.D., Kharkov, B.B., Skrynnikov, N.R.
PDB entry 8c3f: Double mutant I(L177)H/F(M197)H structure of Photosynthetic Reaction Center From Cereibacter sphaeroides strain RV
Classification: PHOTOSYNTHESIS
Source organism: Cereibacter sphaeroides 2.4.1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-12-23
Authors: Gabdulkhakov, A.G., Selikhanov, G.K., Fufina, T.Y., Vasilieva, L.G.
PDB entry 8c3g: Crystal structure of DYRK1A in complex with AZ191
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2022-12-23
Authors: Grygier, P., Pustelny, K., Dubin, G., Czarna, A.
PDB entry 8c3h: Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex a long aspartimide degron peptide
Classification: SIGNALING PROTEIN
Source organism: Magnetospirillum gryphiswaldense; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2022-12-23
Authors: Heim, C., Spring, A.K., Hartmann, M.D.
PDB entry 8c3i: Dark state of PAS-GAF fragment from Deinococcus radiodurans phytochrome
Classification: TRANSFERASE
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-12-24
Authors: Madan Kumar, S., Sebastian, W.
PDB entry 8c3j: Stapled peptide SP2 in complex with humanised RadA mutant HumRadA22
Classification: RECOMBINATION
Source organism: Homo sapiens; Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2022-12-26
Authors: Pantelejevs, T., Hyvonen, M.
PDB entry 8c3k: PaaR2 N-terminal domin in complex with nanobody 33
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli O157:H7; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74972 Å
Deposited: 2022-12-26
Authors: Loris, R., Prolic-Kalinsek, M.
PDB entry 8c3l: PaaR2 N-terminal domain in complex with nanobody 33
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli O157:H7; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5971 Å
Deposited: 2022-12-26
Authors: Loris, R., Prolic-Kalinsek, M.
PDB entry 8c3m: Crystal structure of ferredoxin/flavodoxin NADP+ oxidoreductase 1 (FNR1) V329H mutant from Bacillus cereus
Classification: OXIDOREDUCTASE
Source organism: Bacillus cereus ATCC 14579
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-12-26
Authors: Dahlen, S.A.B., Hammerstad, M., Hersleth, H.-P.
PDB entry 8c3n: Stapled peptide SP30 in complex with humanised RadA mutant HumRadA22
Classification: RECOMBINATION
Source organism: Homo sapiens; Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2022-12-27
Authors: Pantelejevs, T., Hyvonen, M.
PDB entry 8c3o: Crystal structure of autotaxin gamma and compound MEY-003
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2022-12-27
Authors: Eymery, M.C., McCarthy, A.A.
PDB entry 8c3p: Crystal structure of autotaxin gamma in complex with LPA 18:1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-12-28
Authors: Eymery, M.C., McCarthy, A.A.
PDB entry 8c3q: Crystal structure of DYRK1A in complex with rutin
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2022-12-28
Authors: Grygier, P., Pustelny, K., Dubin, G., Czarna, A.
PDB entry 8c3r: Crystal structure of DYRK1A in complex with gossypin
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2022-12-28
Authors: Grygier, P., Pustelny, K., Dubin, G., Czarna, A.
PDB entry 8c3t: Structure of the GIsul2 transposon excisionase
Classification: DNA BINDING PROTEIN
Source organism: Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2022-12-28
Authors: Smyshlyaev, G., Arinkin, V., Barabas, O.
PDB entry 8c3u: Crystal Structure of human IL-1beta in complex with a low molecular weight antagonist
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.945 Å
Deposited: 2022-12-28
Authors: Rondeau, J.-M., Lehmann, S., Koch, E.
PDB entry 8c3v: SARS-CoV-2 Delta-RBD complexed with BA.2-13 Fab and C1 nanobody
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Lama glama; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2022-12-28
Authors: Zhou, D., Ren, J., Stuart, D.I.
PDB entry 8c3w: Crystal structure of a computationally designed heme binding protein, dnHEM1
Classification: BIOSYNTHETIC PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-12-29
Authors: Ortmayer, M., Levy, C.
PDB entry 8c3x: Crystal structure of Paradendryphiella salina PL7C alginate lyase
Classification: LYASE
Source organism: Paradendryphiella salina
Experimental method: X-RAY DIFFRACTION
Resolution: 0.82 Å
Deposited: 2022-12-29
Authors: Fredslund, F., Welner, D.W., Wilkens, C.
PDB entry 8c3y: HB3VAR03 apo headstructure (PfEMP1 A)
Classification: CELL ADHESION
Source organism: Plasmodium falciparum HB3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-12-29
Authors: Raghavan, S.S.R., Lavstsen, T., Wang, K.T.
PDB entry 8c3z: 14-3-3sigma bound to strep-tagged PKA-responsive ERa phosphopeptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-12-30
Authors: Somsen, B.A., Ottmann, C.
PDB entry 8c40: 14-3-3sigma bound to PKA-responsive ERa phosphopeptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-12-30
Authors: Somsen, B.A., Ottmann, C.
PDB entry 8c41: High resolution structure of the Streptococcus pneumoniae topoisomerase IV-DNA complex with the novel fluoroquinolone Delafloxacin
Classification: ISOMERASE
Source organism: Streptococcus pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.393 Å
Deposited: 2022-12-30
Authors: Najmudin, S., Pan, X.S., Wang, B., Chayen, N.E., Fisher, L.M., Sanderson, M.R.
PDB entry 8c42: Ternary structure of 14-3-3sigma, PKA-responsive ERa phosphopeptide and Fusicoccin-A
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-12-30
Authors: Somsen, B.A., Ottmann, C.
PDB entry 8c43: Ternary structure of 14-3-3sigma, strep-tagged PKA-responsive ERa phosphopeptide, and Fusicoccin-A.
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-12-30
Authors: Somsen, B.A., Ottmann, C.
PDB entry 8c44: HB3VAR03 apo headstructure (PfEMP1 A) complexed with EPCR
Classification: CELL ADHESION
Source organism: Homo sapiens; Plasmodium falciparum HB3
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-12-31
Authors: Raghavan, S.S.R., Lavstsen, T., Wang, K.T.
PDB entry 8c45: PglX methyltransferase from the Salmonella BREX phage defence system (aka BrxX)
Classification: DNA BINDING PROTEIN
Source organism: Salmonella enterica subsp. enterica serovar Typhimurium str. D23580
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-01-01
Authors: Blower, T.R., Went, S.C.
PDB entry 8c46: N-Carbamoyl-beta-Alanine Amidohydrolases from Rhizobium radiobacter MDC 8606
Classification: HYDROLASE
Source organism: Agrobacterium tumefaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-01-02
Authors: Basle, A., Marles-Wright, J.
PDB entry 8c47: Leishmania ATP-actin monomer in complex with Leishmania profilin
Classification: STRUCTURAL PROTEIN
Source organism: Leishmania major
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2023-01-02
Authors: Kogan, K., Kotila, T.
PDB entry 8c48: Crystal structure of Thermothelomyces thermophila GH30 (double mutant EE) in complex with xylopentaose
Classification: HYDROLASE
Source organism: Thermothelomyces
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-01-03
Authors: Dimarogona, M., Pentari, C., Kosinas, C., Topakas, E.
PDB entry 8c49: Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for 3-Methyl-L-histidine, bound to AMPPNP
Classification: LIGASE
Source organism: Candidatus Methanomethylophilus alvus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-01-03
Authors: Hardy, F.J., Levy, C.W.
PDB entry 8c4a: Structural and interactional insights into the glideosome-associated connector from Toxoplasma gondii
Classification: STRUCTURAL PROTEIN
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.675 Å
Deposited: 2023-01-03
Authors: Kumar, A., Morgan, R.M.L., Matthews, S.J.
PDB entry 8c4c: F-actin decorated by SipA497-669
Classification: CELL INVASION
Source organism: Gallus gallus; Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-01-03
Authors: Yuan, B., Wald, J., Marlovits, T.C.