LiteFold/PDB huggingface dataset:
PDB entry 8itm: Cryo-EM structure of GIPR splice variant 2 (SV2) in complex with Gs protein
Classification: STRUCTURAL PROTEIN
Source organism: Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-03-22
Authors: Zhao, F.H., Hang, K.N., Zhou, Q.T., Shao, L.J., Li, H., Li, W.Z., Lin, S., Dai, A.T., Cai, X.Q., Liu, Y.Y., Xu, Y.N., Feng, W.B., Yang, D.H., Wang, M.W.
PDB entry 8itn: Crystal structure of USP47apo catalytic domain
Classification: HYDROLASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-03-22
Authors: Kim, E.E., Shin, S.C.
PDB entry 8ito: Crystal structure of FeRlp from Desulfovibrio vulgaris (Hildenborough)
Classification: ELECTRON TRANSPORT
Source organism: Desulfovibrio vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-03-22
Authors: Nakatsuji, T., Ogata, H., Kitamura, M.
PDB entry 8itp: Crystal structure of USP47 catalytic domain complex with ubiquitin
Classification: HYDROLASE/INHIBITOR
Source organism: Caenorhabditis elegans; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-03-22
Authors: Kim, E.E., Shin, S.C.
PDB entry 8itr: Crystal structure of lysophosphatidylcholine in complex with human serum albumin
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2023-03-22
Authors: Wang, Y., Jiang, L.G., Huang, M.D.
PDB entry 8its: Crystal structure of DUF-3268 k-junction
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-03-22
Authors: Li, M., Lilley, D.M.J., Huang, L.
PDB entry 8itt: Crystal structure of lysophosphatidylcholine in complex with human serum albumin and myristate
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.03 Å
Deposited: 2023-03-22
Authors: Wang, Y., Jiang, L.G., Huang, M.D.
PDB entry 8itu: SARS-CoV-2 Omicron BA.1 Spike glycoprotein in complex with rabbit monoclonal antibody 1H1 IgG.
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Oryctolagus cuniculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2023-03-23
Authors: Guo, H., Gao, Y., Lu, Y., Yang, H., Ji, X.
PDB entry 8itv: KL2.1 in complex with CRM1-Ran-RanBP1
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-03-23
Authors: Sun, Q., Jian, L.
PDB entry 8itx: Crystal structure of human Galectin-3 in complex with small molecule inhibitor
Classification: SUGAR BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2023-03-23
Authors: Jinal, S., Ghosh, K.
PDB entry 8ity: human RNA polymerase III pre-initiation complex closed DNA 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2023-03-23
Authors: Hou, H., Jin, Q., Ren, Y., Wang, Q., Xu, Y.
PDB entry 8itz: Crystal structure of human Galectin-3 in complex with small molecule inhibitor
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2023-03-23
Authors: Jinal, S., Amit, K., Ghosh, K.
PDB entry 8iu0: Cryo-EM structure of the potassium-selective channelrhodopsin HcKCR1 H225F mutant in lipid nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Hyphochytrium catenoides
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2023-03-23
Authors: Tajima, S., Kim, Y., Nakamura, S., Yamashita, K., Fukuda, M., Deisseroth, K., Kato, H.E.
PDB entry 8iu1: Crystal structure of mouse Galectin-3 in complex with small molecule inhibitor
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-03-23
Authors: Jinal, S., Amit, K., Ghosh, K.
PDB entry 8iu2: Cryo-EM structure of Long-wave-sensitive opsin 1
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2023-03-23
Authors: Peng, Q., Cheng, X.Y., Li, J., Lu, Q.Y., Li, Y.Y., Zhang, J.
PDB entry 8iu6: Crystal structure of peptidyl-tRNA hydrolase mutant from Enterococcus faecium
Classification: HYDROLASE
Source organism: Enterococcus faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-03-23
Authors: Pandey, R., Tripathi, S., Lanka, A.K., Zohib, M., Pal, R.K., Arora, A.
PDB entry 8iu7: Structure of Staphylococcus aureus NrnA (Pde2) in complex with Mg2+
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2023-03-23
Authors: Cheng, K., Wang, Y.
PDB entry 8iu8: Crystal structure of GH66 endodextranase from Flavobacterium johnsoniae
Classification: HYDROLASE
Source organism: Flavobacterium johnsoniae UW101
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-03-24
Authors: Nakamura, S., Miyazaki, T.
PDB entry 8iu9: Crystal structure of GH66 endodextranase from Flavobacterium johnsoniae in complex with glucose
Classification: HYDROLASE
Source organism: Flavobacterium johnsoniae UW101
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-24
Authors: Nakamura, S., Miyazaki, T.
PDB entry 8iua: Crystal structure of GH66 endodextranase from Flavobacterium johnsoniae in complex with isomaltose
Classification: HYDROLASE
Source organism: Flavobacterium johnsoniae UW101
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-24
Authors: Nakamura, S., Miyazaki, T.
PDB entry 8iub: Crystal structure of GH66 endodextranase from Flavobacterium johnsoniae in complex with isomaltotriose
Classification: HYDROLASE
Source organism: Flavobacterium johnsoniae UW101
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2023-03-24
Authors: Nakamura, S., Miyazaki, T.
PDB entry 8iuc: Crystal structure of GH65 alpha-1,2-glucosidase from Flavobacterium johnsoniae in complex with isomaltose
Classification: HYDROLASE
Source organism: Flavobacterium johnsoniae UW101
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-03-24
Authors: Nakamura, S., Miyazaki, T.
PDB entry 8iud: Crystal Structure of bacterial defense protein GajB
Classification: UNKNOWN FUNCTION
Source organism: Bacillus cereus (strain VD045)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-03-24
Authors: Oh, H., Bae, E.
PDB entry 8iue: RNA polymerase III pre-initiation complex melting complex 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-03-24
Authors: Hou, H., Jin, Q., Ren, Y., Wang, Q., Xu, Y.
PDB entry 8iuf: Cryo-EM structure of Euglena gracilis super-complex I+III2+IV, composite
Classification: ELECTRON TRANSPORT
Source organism: Euglena gracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2023-03-24
Authors: Wu, M.C., Tian, H.T., He, Z.X., Hu, Y.Q., Zhou, L.
PDB entry 8iug: Cryo-EM structure of the RC-LH core complex from roseiflexus castenholzii
Classification: PHOTOSYNTHESIS
Source organism: Roseiflexus castenholzii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2023-03-24
Authors: Wang, G.-L., Qi, C.-H., Yu, L.-J.
PDB entry 8iuh: RNA polymerase III pre-initiation complex open complex 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-03-24
Authors: Hou, H., Jin, Q., Ren, Y., Wang, Q., Xu, Y.
PDB entry 8iui: Crystal structure of silkworm fibroinase complexed with E-64
Classification: HYDROLASE
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-03-24
Authors: Guo, P.C., Wang, Z., Zhao, P.
PDB entry 8iuj: Cryo-EM structure of Euglena gracilis super-complex III2+IV2, composite
Classification: ELECTRON TRANSPORT
Source organism: Euglena gracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2023-03-24
Authors: Wu, M.C., Tian, H.T., He, Z.X., Hu, Y.Q., Zhou, L.
PDB entry 8iuk: Cryo-EM structure of the PGF2-alpha-bound human PTGFR-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2023-03-24
Authors: Wu, C., Xu, Y., Xu, H.E.
PDB entry 8iul: Cryo-EM structure of the latanoprost-bound human PTGFR-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2023-03-24
Authors: Wu, C., Xu, Y., Xu, H.E.
PDB entry 8ium: Cryo-EM structure of the tafluprost acid-bound human PTGFR-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Lama glama; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2023-03-24
Authors: Wu, C., Xu, Y., Xu, H.E.
PDB entry 8iun: Cryo-EM structure of the CRT-LESS RC-LH core complex from roseiflexus castenholzii
Classification: PHOTOSYNTHESIS
Source organism: Roseiflexus castenholzii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2023-03-24
Authors: Wang, G.-L., Qi, C.-H., Yu, L.-J.
PDB entry 8iuo: respiratory syncytial virus nucleocapsid-like assembly
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Human respiratory syncytial virus A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2023-03-24
Authors: Wang, Y., Luo, Y., Ling, X., Luo, B., Jia, G., Dong, H., Su, Z.
PDB entry 8iux: The cryoEM structure of H7N9-HA protein
Classification: MEMBRANE PROTEIN
Source organism: H7N9 subtype
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-03-25
Authors: Zhao, B.B., Sun, Z.Z.
PDB entry 8iuy: H7N9 HA-1H9 Fab
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: H7N9 subtype; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-03-25
Authors: Zhao, B.B., Sun, Z.Z.
PDB entry 8iuz: H7N9 HA-2D7 Fab
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: H7N9 subtype; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-03-25
Authors: Zhao, B.B., Sun, Z.Z.
PDB entry 8iv0: H7N9 HA-C4H4 Fab
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: H7N9 subtype; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-03-25
Authors: Zhao, B.B., Sun, Z.Z.
PDB entry 8iv3: Crystal structure of SARS-CoV2 N-NTD complexed with 5-Benzyloxygramine
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-03-25
Authors: Hong, J.Y., Hou, M.H.
PDB entry 8iv4: Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 3E2 (local refinement)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2023-03-26
Authors: Sun, H., Jiang, Y., Zheng, Q., Li, S., Xia, N.
PDB entry 8iv5: Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 1C4 (local refinement)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2023-03-26
Authors: Sun, H., Jiang, Y., Zheng, Q., Li, S., Xia, N.
PDB entry 8iv8: Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4 (local refinement)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å
Deposited: 2023-03-26
Authors: Sun, H., Jiang, Y., Zheng, Q., Li, S., Xia, N.
PDB entry 8iva: Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs XMA01 and 3E2 (local refinement)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.95 Å
Deposited: 2023-03-26
Authors: Sun, H., Jiang, Y., Zheng, Q., Li, S., Xia, N.
PDB entry 8ivb: K113-Ubiquitinated BAK
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-03-26
Authors: Dong, X., Cheng, P., Hou, Y.Z., Chen, Y.K., Liu, Z.
PDB entry 8ivd: COMPLEX STRUCTURE OF CD93-IGFBP7
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.24 Å
Deposited: 2023-03-27
Authors: Xu, Y.M., Song, G.J.
PDB entry 8ive: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2023-03-27
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8ivf: FABP7 complexed with 25-HC
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-03-27
Authors: Wei, P.C., Zhao, K., Yin, L.
PDB entry 8ivg: Methyl and Fluorine Effects in Novel Orally Bioavailable Keap1/Nrf2 PPI Inhibitor for Treatment of Chronic Kidney Disease
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-03-27
Authors: Otake, K., Ubukata, M., Nagahashi, N., Ogawa, N., Hantani, Y., Hantani, R., Adachi, T., Nomura, A., Yamaguchi, K., Maekawa, M., Mamada, H., Motomura, T., Sato, M., Harada, K.
PDB entry 8ivh: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-03-27
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8ivi: crystal structure of a medium-long chain fatty acyl-CoA ligase
Classification: LIGASE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2023-03-27
Authors: Li, S.
PDB entry 8ivj: Candida boidinii Formate Dehydrogenase V120T Mutant
Classification: OXIDOREDUCTASE
Source organism: [Candida] boidinii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-03-28
Authors: Gul, M., Yuksel, B., Bulut, H., DeMirci, H.
PDB entry 8ivk: Cryogenic temperature crystal structure of Escherichia coli CyaY
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-28
Authors: Shafiei, A., DeMirci, H.
PDB entry 8ivl: FABP7 complexed with Cholesterol
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-03-28
Authors: Wei, P.C., Zhao, K., Yin, L.
PDB entry 8ivm: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2023-03-28
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8ivn: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-28
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8ivp: Crystal structure of MV in complex with LLP and FRU from Mycobacterium vanbaalenii
Classification: TRANSFERASE
Source organism: Mycolicibacterium vanbaalenii (strain DSM 7251 / JCM 13017 / BCRC 16820 / KCTC 9966 / NRRL B-24157 / PYR-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-03-28
Authors: Li, Q., Zhu, Y.M., Gao, J., Wei, H.L., Han, X., Liu, W.D., Sun, Y.X.
PDB entry 8ivq: Cryo-EM structure of mouse BIRC6, Global map
Classification: APOPTOSIS
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-03-28
Authors: Liu, S., Jiang, T., Bu, F., Zhao, J., Wang, G., Li, N., Gao, N., Qiu, X.
PDB entry 8ivr: Methyl and Fluorine Effects in Novel Orally Bioavailable Keap1/Nrf2 PPI Inhibitor for Treatment of Chronic Kidney Disease
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-03-28
Authors: Nomura, A., Yamaguchi, K., Adachi, T.
PDB entry 8ivs: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2023-03-28
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8ivt: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-03-28
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8ivu: Crystal Structure of Human NAMPT in complex with A4276
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09001 Å
Deposited: 2023-03-28
Authors: Kang, B.G., Cha, S.S.
PDB entry 8ivw: Crystal structure of NRP2 in complex with aNRP2-10 Fab fragment
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.205 Å
Deposited: 2023-03-29
Authors: Geng, Y., Zhai, L.
PDB entry 8ivx: Crystal structure of NRP2 in complex with aNRP2-14 Fab fragment
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-03-29
Authors: Geng, Y., Zhai, L.
PDB entry 8ivy: Beta-Glucosidase BglA mutant E166Q in complex with glucose
Classification: HYDROLASE
Source organism: Acetivibrio thermocellus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-03-29
Authors: Dong, S., Xiao, Y., Feng, Y.
PDB entry 8ivz: Crystal structure of talin R7 in complex with KANK1 KN motif
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-03-29
Authors: Xu, Y., Li, K., Wei, Z., Cong, Y.
PDB entry 8iw0: Crystal structure of the KANK1/liprin-beta1 complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-03-29
Authors: Zhang, J., Chen, S., Wei, Z., Yu, C.
PDB entry 8iw1: Cryo-EM structure of the PEA-bound mTAAR9-Golf complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-03-29
Authors: Sun, J.P., Li, Q., Yang, F., Xu, Y.F., Guo, L.L., Lian, S., Zhang, M.H., Rong, N.K.
PDB entry 8iw2: Entamoeba histolytica Pyruvate kinase
Classification: CYTOSOLIC PROTEIN
Source organism: Entamoeba histolytica HM-1:IMSS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2023-03-29
Authors: Rath, P.P., Gourinath, S., Kumari, P.
PDB entry 8iw3: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2023-03-29
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8iw4: Cryo-EM structure of the SPE-bound mTAAR9-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2023-03-29
Authors: Sun, J.P., Li, Q., Yang, F., Xu, Y.F., Guo, L.L., Lian, S., Zhang, M.H., Rong, N.K.
PDB entry 8iw5: Crystal structure of liprin-beta H2H3 dimer
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-03-29
Authors: Zhang, J., Chen, S., Wei, Z.
PDB entry 8iw6: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2023-03-29
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8iw7: Cryo-EM structure of the PEA-bound mTAAR9-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2023-03-29
Authors: Sun, J.P., Li, Q., Yang, F., Xu, Y.F., Guo, L.L., Lian, S., Zhang, M.H., Rong, N.K.
PDB entry 8iw8: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2023-03-29
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8iw9: Cryo-EM structure of the CAD-bound mTAAR9-Gs complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2023-03-29
Authors: Sun, J.P., Li, Q., Yang, F., Xu, Y.F., Guo, L.L., Lian, S., Zhang, M.H., Rong, N.K.
PDB entry 8iwa: Crystal structure of Q9PR55 at pH 6.5
Classification: STRUCTURAL PROTEIN
Source organism: Ureaplasma parvum serovar 3 str. ATCC 700970
Experimental method: X-RAY DIFFRACTION
Resolution: 2.51 Å
Deposited: 2023-03-29
Authors: Hsu, M.F., Ko, T.P., Huang, K.F., Chen, Y.R., Huang, J.S., Hsu, S.T.D.
PDB entry 8iwb: Crystal structure of Q9PR55 at pH 7.5
Classification: STRUCTURAL PROTEIN
Source organism: Ureaplasma parvum serovar 3 str. ATCC 700970
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2023-03-29
Authors: Hsu, M.F., Ko, T.P., Huang, K.F., Chen, Y.R., Huang, J.S., Hsu, S.T.D.
PDB entry 8iwc: Crystal structure of Q9PR55 at pH 6.0
Classification: STRUCTURAL PROTEIN
Source organism: Ureaplasma parvum serovar 3 str. ATCC 700970
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-03-29
Authors: Hsu, M.F., Ko, T.P., Huang, K.F., Chen, Y.R., Huang, J.S., Hsu, S.T.D.
PDB entry 8iwd: Aspergillus niger Rha-2
Classification: HYDROLASE
Source organism: Aspergillus niger
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2023-03-29
Authors: Li, L.J., Li, L., Wang, M.H., Jiang, Z.D., Zhu, Y.B., Jin, T.C., Ni, H.
PDB entry 8iwe: Cryo-EM structure of the SPE-mTAAR9 complex
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-03-29
Authors: Sun, J.P., Li, Q., Yang, F., Xu, Y.F., Guo, L.L., Lian, S., Zhang, M.H., Rong, N.K.
PDB entry 8iwf: Aspergillus niger Rha-2 and pNPR
Classification: HYDROLASE
Source organism: Aspergillus niger
Experimental method: X-RAY DIFFRACTION
Resolution: 2.86 Å
Deposited: 2023-03-29
Authors: Li, L.J., Li, L., Wang, M.H., Jiang, Z.D., Zhu, Y.B., Jin, T.C., Ni, H.
PDB entry 8iwg: Pseudomoans Aerugiona Wildtype Ketopantoate Reductase native structure
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-03-29
Authors: Choudhury, G.B., Datta, S.
PDB entry 8iwh: Structure and characteristics of a photosystem II supercomplex containing monomeric LHCX and dimeric FCPII antennae from the diatom Thalassiosira pseudonana
Classification: PHOTOSYNTHESIS
Source organism: Thalassiosira pseudonana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2023-03-30
Authors: Feng, Y., Li, Z.H., Wang, W.D., Shen, J.R.
PDB entry 8iwi: Cryogenic Temperature Crystal Structure of Escherichia coli CyaY protein at pH 5
Classification: METAL BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-03-30
Authors: Shafiei, A., DeMirci, H.
PDB entry 8iwj: ABCG25 Wild Type in Apo-state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-03-30
Authors: Sun, L., Liu, X., Ying, W., Liao, L., Wei, H.
PDB entry 8iwk: ABCG25 Wild Type purified with DDM plus CHS in ABA-bound state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-03-30
Authors: Sun, L., Liu, X., Ying, W., Liao, L., Wei, H.
PDB entry 8iwl: A.baumannii Uncharacterized sugar kinase ydjH
Classification: SUGAR BINDING PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2023-03-30
Authors: Lee, G.H., Park, H.H.
PDB entry 8iwm: Cryo-EM structure of the PEA-bound mTAAR9 complex
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2023-03-30
Authors: Sun, J.P., Li, Q., Yang, F., Xu, Y.F., Guo, L.L., Lian, S., Zhang, M.H., Rong, N.K.
PDB entry 8iwn: ABCG25 EQ mutant in ATP-bound state
Classification: TRANSPORT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-03-30
Authors: Sun, L., Liu, X., Ying, W., Liao, L., Wei, H.
PDB entry 8iwo: The rice Na+/H+ antiporter SOS1 in an auto-inhibited state
Classification: MEMBRANE PROTEIN
Source organism: Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2023-03-30
Authors: Zhang, X.Y., Tang, L.H., Zhang, C.R., Nie, J.W., Chen, Y.H.
PDB entry 8iwp: hSPCA1 in the CaE1 state
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.59 Å
Deposited: 2023-03-30
Authors: Liu, Z.M., Wu, M.Q., Wu, C.
PDB entry 8iwq: Pseudomoans Aerugiona Native Ketopantoate Reductase with glycerol
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.191 Å
Deposited: 2023-03-30
Authors: Choudhury, G.B., Datta, S.
PDB entry 8iwr: hSPCA1 in the CaE1-ATP state
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2023-03-31
Authors: Liu, Z.M., Wu, M.Q., Wu, C.
PDB entry 8iws: hSPCA1 in the CaE2P state
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-03-31
Authors: Liu, Z.M., Wu, M.Q., Wu, C.
PDB entry 8iwt: hSPCA1 in the early E2P state
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-03-31
Authors: Liu, Z.M., Wu, M.Q., Wu, C.
PDB entry 8iwu: hSPCA1 in the E2~P state
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2023-03-31
Authors: Liu, Z.M., Wu, M.Q., Wu, C.
PDB entry 8iwv: Crystal structure of BlaA-1 APO
Classification: ANTIMICROBIAL PROTEIN
Source organism: Yersinia enterocolitica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-03-31
Authors: Bhattacharya, S., Hazra, S.
PDB entry 8iww: hSPCA1 in the CaE1P-ADP state
Classification: METAL TRANSPORT
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2023-03-31
Authors: Liu, Z.M., Wu, M.Q., Wu, C.
PDB entry 8iwx: Cryo-EM structure of unprotonated LHCII in detergent solution at high pH value
Classification: PLANT PROTEIN
Source organism: Spinacia oleracea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2023-03-31
Authors: Ruan, M.X., Ding, W.
PDB entry 8iwy: Cryo-EM structure of protonated LHCII in detergent solution at low pH value
Classification: PLANT PROTEIN
Source organism: Spinacia oleracea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2023-03-31
Authors: Ruan, M.X., Ding, W.
PDB entry 8iwz: Cryo-EM structure of unprotonated LHCII in detergent solution at low pH value
Classification: PLANT PROTEIN
Source organism: Spinacia oleracea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2023-03-31
Authors: Ruan, M.X., Ding, W.
PDB entry 8ix0: Cryo-EM structure of unprotonated LHCII nanodisc at high pH value
Classification: PLANT PROTEIN
Source organism: Spinacia oleracea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-03-31
Authors: Ruan, M.X., Ding, W.
PDB entry 8ix1: Cryo-EM structure of protonated LHCII nanodisc at low pH value
Classification: PLANT PROTEIN
Source organism: Spinacia oleracea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.63 Å
Deposited: 2023-03-31
Authors: Ruan, M.X., Ding, W.
PDB entry 8ix2: Cryo-EM structure of unprotonated LHCII nanodisc at low pH value
Classification: PLANT PROTEIN
Source organism: Spinacia oleracea
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-03-31
Authors: Ruan, M.X., Ding, W.
PDB entry 8ix3: Cryo-EM structure of SARS-CoV-2 BA.4/5 spike protein in complex with 1G11 (local refinement)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.98 Å
Deposited: 2023-03-31
Authors: Sun, H., Jiang, Y., Zheng, Z., Zheng, Q., Li, S.
PDB entry 8ix6: Crystal structure of Pyruvic Oxime Dioxygenase (POD) from Bradyrhizobium sp. WSM3983
Classification: OXIDOREDUCTASE
Source organism: Bradyrhizobium sp. WSM3983
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2023-03-31
Authors: Tsujino, S., Yamada, Y., Fujiwara, T.
PDB entry 8ix7: Functional significance of serine 13 in the active site of rice Phi-class glutathione S-transferase F3.
Classification: PLANT PROTEIN
Source organism: Oryza sativa subsp. indica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-03-31
Authors: Lee, W.C., Kong, K.H.
PDB entry 8ix9: Pseudomoans Aerugiona Wildtype Ketopantoate Reductase with NADPH
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2023-03-31
Authors: Choudhury, G.B., Datta, S.
PDB entry 8ixa: GMPCPP-Alpha1A/Beta2A-microtubule decorated with kinesin non-seam region
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-03-31
Authors: Zheng, W., Zhao, Q.Y., Diao, L., Bao, L., Cong, Y.
PDB entry 8ixb: GMPCPP-Alpha1A/Beta2A-microtubule decorated with kinesin seam region
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2023-03-31
Authors: Zheng, W., Zhao, Q.Y., Diao, L., Bao, L., Cong, Y.
PDB entry 8ixd: GMPCPP-Alpha1C/Beta2A-microtubule decorated with kinesin non-seam region
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-03-31
Authors: Zheng, W., Zhao, Q.Y., Diao, L., Bao, L., Cong, Y.
PDB entry 8ixe: GMPCPP-Alpha1C/Beta2A-microtubule decorated with kinesin seam region
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-03-31
Authors: Zheng, W., Zhao, Q.Y., Diao, L., Bao, L., Cong, Y.
PDB entry 8ixf: GMPCPP-Alpha4A/Beta2A-microtubule decorated with kinesin non-seam region
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-03-31
Authors: Zheng, W., Zhao, Q.Y., Diao, L., Bao, L., Cong, Y.
PDB entry 8ixg: GMPCPP-Alpha4A/Beta2A-microtubule decorated with kinesin seam region
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2023-03-31
Authors: Zheng, W., Zhao, Q.Y., Diao, L., Bao, L., Cong, Y.
PDB entry 8ixh: Pseudomoans aeruginosa Wildtype Ketopantoate Reductase With 3-Methyl-2-oxovalerate at substrate site
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-04-01
Authors: Choudhury, G.B., Datta, S.
PDB entry 8ixi: Crystal structure of macrolide phosphotransferase from Klebsiella pneumoniae
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2023-04-01
Authors: Zhang, Z.L., Gao, C.
PDB entry 8ixj: Middle segment of the bacteriophage M13 mini variant
Classification: VIRAL PROTEIN
Source organism: Inovirus M13
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-04-01
Authors: Xiang, Y., Jia, Q.
PDB entry 8ixk: bottom segment of the bacteriophage M13 mini variant
Classification: VIRAL PROTEIN
Source organism: Inovirus M13
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-04-01
Authors: Xiang, Y., Jia, Q.
PDB entry 8ixl: top segment of the bacteriophage M13 mini variant
Classification: VIRAL PROTEIN
Source organism: Inovirus M13
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-04-01
Authors: Xiang, Y., Jia, Q.
PDB entry 8ixm: Pseudomoans Aerugiona Wildtype Ketopantoate Reductase ternary complex with NADP+ and alpha-Ketoisocaproic acid
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2023-04-01
Authors: Choudhury, G.B., Datta, S.
PDB entry 8ixn: Curved structure of mPIEZO1-S2472E
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.07 Å
Deposited: 2023-04-01
Authors: Liu, S., Yang, X., Chen, X., Li, X., Xiao, B.
PDB entry 8ixo: Intermediate structure of mPIEZO1-S2472E
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2023-04-01
Authors: Liu, S., Yang, X., Chen, X., Li, X., Xiao, B.
PDB entry 8ixp: Apo structure of glycosyltransferase LmbT wild type
Classification: TRANSFERASE
Source organism: Streptomyces lincolnensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-04-02
Authors: Mori, T., Sun, X., Abe, I.
PDB entry 8ixq: Structure of glycosyltransferase LmbT in complex with GDP and ergothioneine
Classification: TRANSFERASE
Source organism: Streptomyces lincolnensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-02
Authors: Mori, T., Sun, X., Abe, I.
PDB entry 8ixs: Methyl and Fluorine Effects in Novel Orally Bioavailable Keap1/Nrf2 PPI Inhibitor for Treatment of Chronic Kidney Disease
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2023-04-03
Authors: Nomura, A., Yamaguchi, K., Adachi, T.
PDB entry 8ixt: Rat Transcobalamin in Complex with Glutathionylcobalamin
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-04-03
Authors: Bokhove, M., Kumasaka, T.
PDB entry 8ixu: Rat Transcobalamin in Complex with Cobalamin
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-04-03
Authors: Bokhove, M., Kumasaka, T.
PDB entry 8ixv: Crystal structure of intracellular B30.2 domain of BTN3A in complex with 2Cl-HMBPP
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2023-04-03
Authors: Yang, Y.Y., Yi, S.M., Huang, J.W., Chen, C.C., Guo, R.T.
PDB entry 8ixw: Tilapia lake virus S8 segment
Classification: VIRUS
Source organism: Tilapia lake virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-04-03
Authors: Wang, Z.X., Zhang, Y.A., Ouyang, S.Y.
PDB entry 8ixz: Structure of Acb2 complexed with 3',2'-cGAMP
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PaP2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2023-04-03
Authors: Cao, X.L., Xiao, Y., Feng, Y.
PDB entry 8iy0: Structure of Acb2 complexed with cAAA
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PaP2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2023-04-03
Authors: Cao, X.L., Xiao, Y., Feng, Y.
PDB entry 8iy1: Structure of Acb2 complexed with cAAG
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PaP2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-03
Authors: Cao, X.L., Xiao, Y., Feng, Y.
PDB entry 8iy2: Structure of Acb2 complexed with 3',3'-cGAMP and cAAA
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PaP2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2023-04-03
Authors: Cao, X.L., Xiao, Y., Feng, Y.
PDB entry 8iy5: ETB-Gi complex bound to endothelin-1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus; Rattus rattus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-04-04
Authors: Sano, F.K., Akasaka, H., Shihoya, W., Nureki, O.
PDB entry 8iy6: ETB-Gi complex bound to Endotheline-1, focused on receptor
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-04-04
Authors: Sano, F.K., Akasaka, H., Shihoya, W., Nureki, O.
PDB entry 8iy7: Cryo-EM structure of DIP-2I8I fibril polymorph1
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.71 Å
Deposited: 2023-04-04
Authors: Li, D.N., Ma, Y.Y., Li, D., Dai, B., Liu, C.
PDB entry 8iy8: Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii
Classification: HYDROLASE
Source organism: Aspergillus sydowii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-04-04
Authors: Phienluphon, A., Kondo, K., Mikami, B., Nagata, T., Katahira, M.
PDB entry 8iy9: Structure of Niacin-GPR109A-G protein complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2023-04-04
Authors: Yadav, M.K., Sarma, P., Chami, M., Banerjee, R., Shukla, A.K.
PDB entry 8iya: Complex of SETDB1-derived peptide bound to UBE2E1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2023-04-04
Authors: Du, Y.X., Liu, L.
PDB entry 8iyb: Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii
Classification: HYDROLASE
Source organism: Aspergillus sydowii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-04-04
Authors: Phienluphon, A., Kondo, K., Mikami, B., Nagata, T., Katahira, M.
PDB entry 8iyc: Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii
Classification: HYDROLASE
Source organism: Aspergillus sydowii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-04-04
Authors: Phienluphon, A., Kondo, K., Mikami, B., Nagata, T., Katahira, M.
PDB entry 8iyd: Tail cap of phage lambda tail
Classification: VIRAL PROTEIN
Source organism: Escherichia phage lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-04-04
Authors: Wang, J.W., Wang, C.
PDB entry 8iye: Structure of VldE-D158N in complex with GDP
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus subsp. limoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-04-04
Authors: Wong, C.P., Mori, T., Mahmud, T., Abe, I.
PDB entry 8iyf: Structure of VldE-H182A in complex with GDP
Classification: TRANSFERASE
Source organism: Streptomyces hygroscopicus subsp. limoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-04-04
Authors: Wong, C.P., Mori, T., Mahmud, T., Abe, I.
PDB entry 8iyg: Human neuronal gap junction channel connexin 36
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2023-04-04
Authors: Mao, W.X., Chen, S.S.
PDB entry 8iyh: Structure of MK6892-GPR109A-G-protein complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-04-04
Authors: Yadav, M.K., Sarma, P., Chami, M., Banerjee, R., Shukla, A.K.
PDB entry 8iyi: Spermidine synthase from Kluyveromyces lactis
Classification: TRANSFERASE
Source organism: Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-04-05
Authors: Kim, S., Chang, J.H.
PDB entry 8iyj: Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-04-05
Authors: Zhou, L.N., Gui, M., Wu, J.P.
PDB entry 8iyk: Tail tip conformation 1 of phage lambda tail
Classification: VIRAL PROTEIN
Source organism: Escherichia phage lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-04-05
Authors: Wang, J.W., Wang, C.
PDB entry 8iyl: Tail tip conformation 2 of phage lambda tail
Classification: VIRAL PROTEIN
Source organism: Escherichia phage lambda
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-04-05
Authors: Wang, J.W., Wang, C.
PDB entry 8iym: Crystal structure of a protein acetyltransferase, HP0935
Classification: TRANSFERASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-04-05
Authors: Dadireddy, V., Mahanta, P., Kumar, A., Desirazu, R.N., Ramakumar, S.
PDB entry 8iyn: Crystal structure of LOV1 D33N mutant of phototropin from Klebsormidium nitens
Classification: FLAVOPROTEIN
Source organism: Klebsormidium nitens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.081 Å
Deposited: 2023-04-05
Authors: Gautam, A.K., Sharma, S., Gourinath, S., Kateriya, S.
PDB entry 8iyo: Crystal structure of a protein acetyltransferase, HP0935, acetyl-CoA bound form
Classification: TRANSFERASE
Source organism: Helicobacter pylori 26695
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-04-05
Authors: Dadireddy, V., Mahanta, P., Kumar, A., Desirazu, R.N., Ramakumar, S.
PDB entry 8iyp: Crystal structure of serine palmitoyltransferase soaked in 190 mM D-serine solution
Classification: TRANSFERASE
Source organism: Sphingobacterium multivorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.651 Å
Deposited: 2023-04-05
Authors: Takahashi, A., Murakami, T., Katayama, A., Miyahara, I., Kamiya, N., Ikushiro, H., Yano, T.
PDB entry 8iyq: Structure of CbCas9 bound to 20-nucleotide complementary DNA substrate
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Chryseobacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2023-04-05
Authors: Zhang, S., Lin, S., Liu, J.J.G.
PDB entry 8iyr: The cryo-EM structure of cellobiose phosphorylase from Clostridium thermocellum in complex with phosphate
Classification: TRANSFERASE
Source organism: Acetivibrio thermocellus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-04-05
Authors: Iriya, S., Kuga, T., Sunagawa, N., Igarashi, K.
PDB entry 8iys: TUG891-bound FFAR4 in complex with Gq
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-04-06
Authors: He, Y., Yin, H.
PDB entry 8iyt: Crystal Structure of Serine Palmitoyltransferase complexed with D-methylserine
Classification: TRANSFERASE
Source organism: Sphingobacterium multivorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-04-06
Authors: Takahashi, A., Murakami, T., Katayama, A., Miyahara, I., Kamiya, N., Ikushiro, H., Yano, T.
PDB entry 8iyu: CfbA S11T variant with Ni(II) ions
Classification: BIOSYNTHETIC PROTEIN
Source organism: Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-06
Authors: Ogawa, S., Fujishiro, T.
PDB entry 8iyv: Crystal structure of trypsin-famotidine complex at 2.10 Angstroms resolution
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-06
Authors: Ahmad, M.S., Kalam, N., Akbar, Z., Rasheed, S., Choudhary, M.I.
PDB entry 8iyw: Structure of GSK256073-GPR109A-G-protein complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2023-04-06
Authors: Yadav, M.K., Sarma, P., Chami, M., Banerjee, R., Shukla, A.K.
PDB entry 8iyx: Cryo-EM structure of the GPR34 receptor in complex with the antagonist YL-365
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.34 Å
Deposited: 2023-04-06
Authors: Jia, G.W., Wang, X., Zhang, C.B., Dong, H.H., Su, Z.M.
PDB entry 8iyy: Single excitation and two emissions pH sensor protein(SITE-pHorin)_pH7.0
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-04-06
Authors: Li, S.A., Kang, J.S.
PDB entry 8iyz: mTurquoise2 S65T
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-04-06
Authors: Kang, J.S., Li, S.A.
PDB entry 8iz0: mTurquoise2 W66Y
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-06
Authors: Li, S.A., Kang, J.S.
PDB entry 8iz1: Single excitation and two emissions pH sensor protein (SITE-pHorin)_C203E_pH5.0
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2023-04-06
Authors: Li, S.A., Kang, J.S.
PDB entry 8iz2: Single excitation and two emissions pH sensor protein (SITE-pHorin)_C203E_pH8.0
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 1.572 Å
Deposited: 2023-04-06
Authors: Kang, J.S., Li, S.A.
PDB entry 8iz3: Single excitation and two emissions pH sensor protein(SITE-pHorin)_pH5.5
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2023-04-06
Authors: Kang, J.S., Li, S.A.
PDB entry 8iz4: Lysophosphatidylserine receptor GPR34-Gi complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-04-06
Authors: Gong, W., Liu, G., Li, X., Zhang, X.
PDB entry 8iz7: cryo-EM structure of sulindac-bound hMRP4
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-04-06
Authors: Liu, Z.M., Huang, Y.
PDB entry 8iz8: cryo EM structure of apo hMRP4
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2023-04-06
Authors: Liu, Z.M., Huang, Y.
PDB entry 8iz9: cryo-EM structure of PGE1-bound hMRP4
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-04-06
Authors: Liu, Z.M., Huang, Y.
PDB entry 8iza: cryo-EM structure of ATP-bound hMRP4
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2023-04-06
Authors: Liu, Z.M., Huang, Y.
PDB entry 8izb: Lysophosphatidylserine receptor GPR174-Gs complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2023-04-06
Authors: Gong, W., Liu, G., Li, X., Zhang, X.