LiteFold/PDB huggingface dataset:
PDB entry 7u28: Structure of SARS-CoV-2 Mpro Lambda (G15S) in complex with Nirmatrelvir (PF-07321332)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.679 Å
Deposited: 2022-02-23
Authors: Greasley, S.E., Ferre, R.A., Plotnikova, O., Liu, W., Stewart, A.E.
PDB entry 7u29: Structure of SARS-CoV-2 Mpro mutant (K90R) in complex with Nirmatrelvir (PF-07321332)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.088 Å
Deposited: 2022-02-23
Authors: Greasley, S.E., Ferre, R.A., Liu, W., Stewart, A.E.
PDB entry 7u2a: Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA (GCU)
Classification: Ligase/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-02-23
Authors: Hirschi, M., Kuhle, B., Doerfel, L., Schimmel, P., Lander, G.
PDB entry 7u2b: Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA(GCU-TL)
Classification: ligase/RNA
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-02-23
Authors: Hirschi, M., Kuhle, B., Doerfel, L., Schimmel, P., Lander, G.
PDB entry 7u2d: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody ADG20
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.76 Å
Deposited: 2022-02-23
Authors: Zhu, X., Yuan, M., Wilson, I.A.
PDB entry 7u2e: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody ADI-55688
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-02-23
Authors: Yuan, M., Zhu, X., Wilson, I.A.
PDB entry 7u2f: G116F Pseudomonas aeruginosa azurin
Classification: ELECTRON TRANSPORT
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-02-23
Authors: Liu, Y., Lu, Y.
PDB entry 7u2h: Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-02-24
Authors: Syroegin, E.A., Aleksandrova, E.V., Polikanov, Y.S.
PDB entry 7u2i: Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-02-24
Authors: Syroegin, E.A., Aleksandrova, E.V., Polikanov, Y.S.
PDB entry 7u2j: Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-02-24
Authors: Syroegin, E.A., Aleksandrova, E.V., Polikanov, Y.S.
PDB entry 7u2k: C6-guano bound Mu Opioid Receptor-Gi Protein Complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-02-24
Authors: Wang, H., Kobilka, B.
PDB entry 7u2l: C5guano-uOR-Gi-scFv16
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-02-24
Authors: Wang, H., Qu, Q., Skiniotis, G., Kobilka, B.
PDB entry 7u2m: A novel compound mimics the structural and functional effects of the full agonist glycine on glycine channels-desenstized state
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-02-24
Authors: Zhu, H., Gouaux, E.
PDB entry 7u2n: A novel compound mimics the structural and functional effects of the full agonist glycine on glycine channels-open state
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-02-24
Authors: Zhu, H., Gouaux, E.
PDB entry 7u2o: A novel compound mimics the structural and functional effects of the full agonist glycine on glycine channels-Expanded-open state
Classification: MEMBRANE PROTEIN
Source organism: Danio rerio
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-02-24
Authors: Zhu, H., Gouaux, E.
PDB entry 7u2p: Structure of TcdA GTD in complex with RhoA
Classification: TOXIN
Source organism: Clostridioides difficile; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.596 Å
Deposited: 2022-02-24
Authors: Baohua, C., Zheng, L., Kay, P., Rongsheng, J.
PDB entry 7u2q: Influenza Neuraminidase N1-CA09-sNAp-155
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-02-24
Authors: Acton, O.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u2r: Structure of Paenibacillus sp. J14 Apyc1
Classification: HYDROLASE
Source organism: Paenibacillus sp. J14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-02-24
Authors: Hobbs, S.J., Wein, T., Lu, A., Morehouse, B.R., Schnabel, J., Sorek, R., Kranzusch, P.J.
PDB entry 7u2s: Structure of Paenibacillus xerothermodurans Apyc1 in the apo state
Classification: HYDROLASE
Source organism: Paenibacillus xerothermodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-02-24
Authors: Hobbs, S.J., Wein, T., Lu, A., Morehouse, B.R., Schnabel, J., Sorek, R., Kranzusch, P.J.
PDB entry 7u2t: Influenza Neuraminidase N1-MI15-sNAp-174
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2022-02-24
Authors: Acton, O.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u2u: CRYSTAL STRUCTURE OF HIV-1 INTEGRASE COMPLEXED WITH Compound-2a AKA (2S)-2-(TERT-BUTOXY)-2-[7-(4,4-DIMETHYLPIPE RIDIN-1-YL)-8-{4-[2-(4-FLUOROPHENYL)ETHOXY]PHENYL}-2,5-DIM ETHYLIMIDAZO[1,2-A]PYRIDIN-6-YL]ACETIC ACID
Classification: DNA BINDING PROTEIN, viral protein
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.839 Å
Deposited: 2022-02-24
Authors: Khan, J.A., lewis, H., Kish, K.
PDB entry 7u2v: Plasmodium falciparum Cyt c2 DSD
Classification: ELECTRON TRANSPORT
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-02-24
Authors: Hill, C.P., Wienkers, H.J., Whitby, F.G.
PDB entry 7u2x: Cryo-EM structure of the pancreatic ATP-sensitive potassium channel in the presence of carbamazepine and ATP with Kir6.2-CTD in the down conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-02-25
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7u2z: Crystal structure of human GSK3B in complex with G12
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2022-02-25
Authors: Tripathi, S.K., Balboni, B., Giabbai, B., Storici, P., Girotto, S., Cavalli, A.
PDB entry 7u30: PRMT5:MEP50 Complexed with Cyclonucleoside Compound 1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-02-25
Authors: Palte, R.L.
PDB entry 7u31: Crystal structure of human GSK3B in complex with G5
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-02-25
Authors: Tripathi, S.K., Balboni, B., Giabbai, B., Storici, P., Girotto, S., Cavalli, A.
PDB entry 7u32: MVV cleaved synaptic complex (CSC) intasome at 3.4 A resolution
Classification: VIRAL PROTEIN/DNA
Source organism: Visna/maedi virus EV1 KV1772; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.46 Å
Deposited: 2022-02-25
Authors: Shan, Z., Pye, V.E., Cherepanov, P., Lyumkis, D.
PDB entry 7u33: Crystal structure of human GSK3B in complex with ARN9133
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-02-25
Authors: Tripathi, S.K., Balboni, B., Giabbai, B., Storici, P., Girotto, S., Cavalli, A.
PDB entry 7u34: The structure of phosphoglucose isomerase from Aspergillus fumigatus
Classification: ISOMERASE
Source organism: Aspergillus fumigatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-02-25
Authors: Yan, K., Kowalski, B., Fang, W., van Aalten, D.
PDB entry 7u35: Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from Pseudomonas aeruginosa PAO1 in complex with ADP
Classification: LIGASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-02-25
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u36: Crystal structure of human GSK3B in complex with ARN1484
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-02-25
Authors: Tripathi, S.K., Balboni, B., Giabbai, B., Storici, P., Girotto, S., Cavalli, A.
PDB entry 7u37: Solution NMR structure of Vibrio cholerae ferrous iron transport protein C (FeoC)
Classification: CYTOSOLIC PROTEIN
Source organism: Vibrio cholerae O1
Experimental method: SOLUTION NMR
Deposited: 2022-02-25
Authors: Brown, J.B., Lee, M.A., Smith, A.T.
PDB entry 7u38: Pixantrone tethered DNA duplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2022-02-26
Authors: Pallan, P.S., Egli, M.
PDB entry 7u39: Structure of the apo form of Streptomyces venezuelae GlgX, the glycogen debranching enzyme
Classification: HYDROLASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.51 Å
Deposited: 2022-02-26
Authors: Schumacher, M.A.
PDB entry 7u3a: Structure of the Streptomyces venezuelae GlgX-c-di-GMP complex
Classification: HYDROLASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.34 Å
Deposited: 2022-02-26
Authors: Schumacher, M.A.
PDB entry 7u3b: Structure of S. venezuelae GlgX bound to c-di-GMP and acarbose (pH 8.5)
Classification: HYDROLASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2022-02-26
Authors: Schumacher, M.A., Tschowri, N.
PDB entry 7u3d: Structure of S. venezuelae GlgX-c-di-GMP-acarbose complex (4.6)
Classification: HYDROLASE
Source organism: Streptomyces venezuelae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-02-27
Authors: Schumacher, M.A.
PDB entry 7u3e: GID4 in complex with compound 1
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.852 Å
Deposited: 2022-02-27
Authors: Chana, C.K., Sicheri, F.
PDB entry 7u3f: GID4 in complex with compound 4
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-02-27
Authors: Chana, C.K., Sicheri, F.
PDB entry 7u3g: GID4 in complex with compound 67
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.244 Å
Deposited: 2022-02-27
Authors: Chana, C.K., Sicheri, F.
PDB entry 7u3h: GID4 in complex with compound 7
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.798 Å
Deposited: 2022-02-27
Authors: Chana, C.K., Sicheri, F.
PDB entry 7u3i: GID4 in complex with compound 16
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.991 Å
Deposited: 2022-02-27
Authors: Chana, C.K., Sicheri, F.
PDB entry 7u3j: GID4 in complex with compound 88
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.642 Å
Deposited: 2022-02-27
Authors: Chana, C.K., Sicheri, F.
PDB entry 7u3k: GID4 in complex with compound 89
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.198 Å
Deposited: 2022-02-27
Authors: Chana, C.K., Sicheri, F.
PDB entry 7u3l: GID4 in complex with compound 91
Classification: PEPTIDE BINDING PROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.295 Å
Deposited: 2022-02-27
Authors: Chana, C.K., Sicheri, F.
PDB entry 7u3m: Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with N-methylpiperazine Benzhydroxamic Acid
Classification: HYDROLASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-02-27
Authors: Herbst-Gervasoni, C.J., Christianson, D.W.
PDB entry 7u3o: [a2T7] Self-assembling asymmetric tensegrity triangle with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.31 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u3p: [3T7] Self-assembling tensegrity triangle with three turns of DNA per axis with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 6.06 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Lu, B., Ma, Y., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u3q: [4T7] Self-assembling tensegrity triangle with four turns of DNA per axis with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 9.32 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Lu, B., Ma, Y., Seeman, N.C., Sha, R., Ohayon, Y.P., Huang, Q.
PDB entry 7u3r: [2T7+10] Self-assembling tensegrity triangle with two turns of DNA and the sticky end attachment of a one-turn linker per axis, with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 6.27 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Lu, B., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u3s: [2T7+21] Self-assembling tensegrity triangle with two turns of DNA and the sticky end addition of a two-turn linker per axis with R3 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 9.5 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u3t: [F223] Self-assembling tensegrity triangle with two turns, two turns and three turns of DNA per axis by extension with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.69 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P., Zhu, E.
PDB entry 7u3u: [L223] Self-assembling tensegrity triangle with two turns, two turns and three turns of DNA per axis by linker addition with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 4.46 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u3v: [F224] Self-assembling tensegrity triangle with two turns, two turns and four turns of DNA per axis by extension with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 5.14 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u3w: [L224] Self-assembling tensegrity triangle with two turns, two turns and four turns of DNA per axis by linker addition with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 6.33 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u3x: [F233] Self-assembling tensegrity triangle with two turns, three turns and three turns of DNA per axis by extension with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 5.68 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u3y: [L233] Self-assembling tensegrity triangle with two turns, three turns and three turns of DNA per axis by linker addition with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 6.06 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u3z: [F244] Self-assembling tensegrity triangle with two turns, four turns and four turns of DNA per axis by extension with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 7.55 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u40: [L244] Self-assembling tensegrity triangle with two turns, four turns and four turns of DNA per axis by linker addition with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 7.55 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u41: [F234] Self-assembling tensegrity triangle with two turns, three turns and four turns of DNA per axis by extension with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 7.24 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u42: [F334] Self-assembling tensegrity triangle with three turns, three turns and four turns of DNA per axis by extension with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 7.71 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u43: [L334] Self-assembling tensegrity triangle with three turns, three turns and four turns of DNA per axis by extension and linker addition with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 7.55 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u44: [F344] Self-assembling tensegrity triangle with three turns, four turns and four turns of DNA per axis by extension with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 8.46 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u45: [L344] Self-assembling tensegrity triangle with three turns, four turns and four turns of DNA per axis by extension and linker addition with P1 symmetry
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 8.05 Å
Deposited: 2022-02-28
Authors: Woloszyn, K., Vecchioni, S., Seeman, N.C., Sha, R., Ohayon, Y.P.
PDB entry 7u46: Cryo-EM structure of CENP-A nucleosome (palindromic alpha satellite DNA) in complex with CENP-N
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2022-02-28
Authors: Zhou, K., Luger, K.
PDB entry 7u47: CryoEM structure of CENP-N promoted nucleosome stacks with CENP-A and palindromic alpha satellite DNA sequence
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2022-02-28
Authors: Zhou, K., Luger, K.
PDB entry 7u48: Clavulanic acid-CTX-M-15
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2022-02-28
Authors: Ahmadvand, P., Kang, C.H.
PDB entry 7u49: DFC-CTX-M-15
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2022-02-28
Authors: Ahmadvand, P., Kang, C.H.
PDB entry 7u4a: Crystal Structure of Zika virus xrRNA1 mutant
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2022-02-28
Authors: Thompson, R.D., Carbaugh, D.L., Nielsen, J.R., Witt, C., Meganck, R.M., Rangadurai, A., Zhao, B., Bonin, J.P., Nathan, N.T., Marzluff, W.F., Frank, A.T., Lazear, H.M., Zhang, Q.
PDB entry 7u4b: Ampicillin-CTX-M-15
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2022-02-28
Authors: Ahmadvand, P., Kang, C.H.
PDB entry 7u4c: Borrelia burgdorferi HtpG N-terminal domain (1-228) in complex with BX-2819
Classification: CHAPERONE/INHIBITOR
Source organism: Borreliella burgdorferi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2022-02-28
Authors: Kowalewski, M.E., Lietzan, A., Haystead, T., Redinbo, M.R.
PDB entry 7u4d: CryoEM structure of CENP-N promoted nucleosome stacks with CENP-A and 601 DNA sequence
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 8.1 Å
Deposited: 2022-02-28
Authors: Zhou, K., Luger, K.
PDB entry 7u4e: Neuraminidase from influenza virus A/Bilthoven/17938/1969(H3N2)
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Influenza A virus (A/Bilthoven/17938/1969(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-02-28
Authors: Lei, R., Hernandez Garcia, A.
PDB entry 7u4f: Neuraminidase from influenza virus A/Moscow/10/1999(H3N2)
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Influenza A virus (A/Moscow/10/1999(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-02-28
Authors: Lei, R., Hernandez Garcia, A.
PDB entry 7u4g: Neuraminidase from influenza virus A/Shandong/9/1993(H3N2)
Classification: VIRAL PROTEIN, Hydrolase
Source organism: Influenza A virus (A/Shandong/9/1993(H3N2))
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-02-28
Authors: Lei, R., Hernandez Garcia, A.
PDB entry 7u4h: Crystal Structure of Penicillin-binding protein 1A (Pbp1a) from Chlamydia trachomatis
Classification: PENICILLIN BINDING PROTEIN
Source organism: Chlamydia trachomatis D/UW-3/CX
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-02-28
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u4i: Crystal structure of human GPX4-U46C-R152H in complex with CDS9
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-02-28
Authors: Forouhar, F., Liu, H., Lin, A.J., Wang, Q., Polychronidou, V., Soni, R.K., Xia, X., Stockwell, B.R.
PDB entry 7u4j: Crystal structure of human GPX4-U46C-R152H in complex with TMT10
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2022-02-28
Authors: Forouhar, F., Liu, H., Lin, A.J., Wang, Q., Polychronidou, V., Soni, R.K., Xia, X., Stockwell, B.R.
PDB entry 7u4k: Crystal structure of human GPX4-U46C-R152H in complex with ML162
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-02-28
Authors: Forouhar, F., Liu, H., Lin, A.J., Wang, Q., Xia, X., Soni, R.K., Stockwell, B.R.
PDB entry 7u4l: Crystal structure of human GPX4-U46C in complex with MAC-5576
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-02-28
Authors: Forouhar, F., Liu, H., Lin, A.J., Wang, Q., Polychronidou, V., Soni, R.K., Xia, X., Stockwell, B.R.
PDB entry 7u4m: Crystal structure of human GPX4-U46C in complex with LOC1886
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2022-02-28
Authors: Forouhar, F., Liu, H., Lin, A.J., Wang, Q., Polychronidou, V., Soni, R.K., Xia, X., Stockwell, B.R.
PDB entry 7u4n: Crystal structure of human GPX4-U46C in complex with RSL3
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-02-28
Authors: Forouhar, F., Liu, H., Lin, A.J., Wang, Q., Xia, X., Soni, R.K., Stockwell, B.R.
PDB entry 7u4o: Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethyl-1-((9-propyl-5,6-dihydrothieno[3,4-h]quinazolin-2-yl)thio)butan-2-one, an allosteric inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-02-28
Authors: Gannam, Z.T.K., Jamali, H., Lolis, E., Anderson, K.S., Ellman, J.A., Bennett, A.M.
PDB entry 7u4p: Covalently stabilized triangular trimer composed of Abeta17-36 beta-hairpins
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.803 Å
Deposited: 2022-02-28
Authors: Kreutzer, A.G., Haerianardakani, S., Nowick, J.S.
PDB entry 7u4q: Human Synaptotagmin-1 C2A Y181F Ca2+ bound
Classification: EXOCYTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-02-28
Authors: Dominguez, M.J., Karmakar, S., Fuson, K.L., Sutton, R.B.
PDB entry 7u4r: Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethyl-1-((9-propyl-5,6-dihydrothieno[2,3-h]quinazolin-2-yl)thio)butan-2-one, an allosteric inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2022-02-28
Authors: Gannam, Z.T.K., Jamali, H., Gentzel, E., Lolis, E., Anderson, K.S., Ellman, J.A., Bennett, A.M.
PDB entry 7u4s: Structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans
Classification: OXIDOREDUCTASE
Source organism: Candida albicans WO-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2022-02-28
Authors: Miranda, R.R., Silva, M., Iulek, J.
PDB entry 7u4t: Human V-ATPase in state 2 with SidK and mEAK-7
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Legionella pneumophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-03-01
Authors: Wang, L., Fu, T.M.
PDB entry 7u4w: The ubiquitin-associated domain of human thirty-eight negative kinase-1 flexibly fused to the 1TEL crystallization chaperone via a 2-glycine linker and crystallized at traditional protein concentration
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-01
Authors: Nawarathnage, S., Pedroza Romo, M.J., Smith, T., Bunn, D., Stewart, C., Doukov, T., Moody, J.D.
PDB entry 7u4z: The ubiquitin-associated domain of human thirty-eight negative kinase-1 flexibly fused to the 1TEL crystallization chaperone via a 2-glycine linker and crystallized at very low protein concentration
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2022-03-01
Authors: Nawarathnage, S., Smith, T., Moody, J.D.
PDB entry 7u50: APE1 bound to a nucleosome core particle with AP-site at SHL-6
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-03-01
Authors: Weaver, T.M., Freudenthal, B.D.
PDB entry 7u51: Nucleosome core particle with AP-site at SHL-6
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-01
Authors: Freudenthal, B.D., Weaver, T.M.
PDB entry 7u52: nucleosome core particle with AP-site at SHL-6.5
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-03-01
Authors: Freudenthal, B.D., Weaver, T.M.
PDB entry 7u53: Nucleosome core particle with AP-site at SHL0
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2022-03-01
Authors: Freudenthal, B.D., Weaver, T.M.
PDB entry 7u55: Crystal structure of Thermoplasmatales archaeon heliorhodopsin at pH 4.5
Classification: MEMBRANE PROTEIN
Source organism: Thermoplasmatales archaeon SG8-52-1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-03-01
Authors: Besaw, J.E., De Guzman, P., Miller, R.J.D., Ernst, O.P.
PDB entry 7u56: Crystal Structure of D-alanine--D-alanine ligase from Klebsiella pneumoniae subsp. pneumoniae in complex with AMP
Classification: LIGASE
Source organism: Klebsiella pneumoniae subsp. pneumoniae HS11286
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-03-01
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u57: apo-CTX-M-15
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2022-03-01
Authors: Ahmadvand, P., Kang, C.H.
PDB entry 7u58: YcaO-mediated ATP-dependent peptidase activity in ribosomal peptide biosynthesis
Classification: HYDROLASE
Source organism: Desmonostoc sp. PCC 7906
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-01
Authors: Zheng, Y., Nair, S.K.
PDB entry 7u59: Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with Piperidine-4-hydroxamic acid Inhibitor
Classification: HYDROLASE
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-03-01
Authors: Herbst-Gervasoni, C.J., Christianson, D.W.
PDB entry 7u5a: Crystal structure of queuine salvage enzyme DUF2419 mutant K199C, complexed with queuosine
Classification: HYDROLASE
Source organism: Sphaerobacter thermophilus DSM 20745
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-01
Authors: Hung, S.-H., Swairjo, M.A.
PDB entry 7u5b: Structure of Human KLK5 bound to anti-KLK5 Fab
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.371 Å
Deposited: 2022-03-02
Authors: Yin, J., Sudhamsu, J.
PDB entry 7u5c: Cryo-EM structure of human CST bound to DNA polymerase alpha-primase in a recruitment state
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-03-02
Authors: Cai, S.W., Zinder, J.C., Svetlov, V., Bush, M.W., Nudler, E., Walz, T., de Lange, T.
PDB entry 7u5d: I-F3b Cascade-TniQ full R-loop complex
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Aeromonas salmonicida; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.52 Å
Deposited: 2022-03-02
Authors: Park, J.U., Mehrotra, E., Kellogg, E.H.
PDB entry 7u5e: I-F3b Cascade-TniQ partial R-loop complex
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Aeromonas salmonicida; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.03 Å
Deposited: 2022-03-02
Authors: Park, J.U., Mehrotra, E., Kellogg, E.H.
PDB entry 7u5f: Crystal structure of guanylate kinase from Pseudomonas aeruginosa PAO1 in complex with GMP
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-02
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u5g: ACS122 Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2022-03-02
Authors: Farokhi, E., Stanfield, R.L., Wilson, I.A.
PDB entry 7u5h: Cryo-EM Structure of DNPEP
Classification: PEPTIDE BINDING PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2022-03-02
Authors: Morgan, C.E., Yu, E.W., Zhang, Z.
PDB entry 7u5i: Cryo-EM Structure of Mitochondrial Creatine Kinase
Classification: TRANSFERASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.26 Å
Deposited: 2022-03-02
Authors: Morgan, C.E., Yu, E.W., Zhang, Z.
PDB entry 7u5j: Cryo-EM Structure of ALDOA
Classification: LYASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2022-03-02
Authors: Morgan, C.E., Zhang, Z., Yu, E.W.
PDB entry 7u5k: Cryo-EM Structure of DPYSL2
Classification: NEUROPEPTIDE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2022-03-02
Authors: Morgan, C.E., Yu, E.W.
PDB entry 7u5l: Cryo-EM Structure of Ferritin
Classification: METAL BINDING PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2022-03-02
Authors: Morgan, C.E., Zhang, Z., Yu, E.W.
PDB entry 7u5m: Cryo-EM Structure of GAPDH
Classification: TRANSFERASE
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.28 Å
Deposited: 2022-03-02
Authors: Morgan, C.E., Zhang, Z., Yu, E.W.
PDB entry 7u5n: Cryo-EM Structure of Glutamine Synthetase
Classification: PEPTIDE BINDING PROTEIN
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2022-03-02
Authors: Morgan, C.E., Yu, E.W., Zhang, Z.
PDB entry 7u5o: CRYSTAL STRUCTURE OF THE BONE MORPHOGENETIC PROTEIN RECEPTOR TYPE 2 LIGAND BINDING DOMAIN IN COMPLEX WITH ACTIVIN-B
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
Deposited: 2022-03-02
Authors: Chu, K.Y., Malik, A., Thamilselvan, V., Martinez-Hackert, E.
PDB entry 7u5p: CRYSTAL STRUCTURE OF THE ACTIVIN RECEPTOR TYPE-2A LIGAND BINDING DOMAIN IN COMPLEX WITH ACTIVIN-A
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2022-03-02
Authors: Chu, K.Y., Malik, A., Thamilselvan, V., Martinez-Hackert, E.
PDB entry 7u5q: Crystal structure of transcriptional regulator, GntR family, from Brucella melitensis
Classification: DNA BINDING PROTEIN
Source organism: Brucella melitensis ATCC 23457
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-03-02
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u5s: CryoEM structure of the Candida albicans Aro1 dimer
Classification: BIOSYNTHETIC PROTEIN
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.16 Å
Deposited: 2022-03-02
Authors: Quade, B., Borek, D., Otwinowski, Z., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7u5t: Structure of DHQS/EPSPS dimer from Candida albicans Aro1
Classification: BIOSYNTHETIC PROTEIN
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2022-03-02
Authors: Quade, B., Borek, D., Otwinowski, Z., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7u5u: Structure of the SK/DHQase/DHSD dimer from Candida albicans Aro1
Classification: BIOSYNTHETIC PROTEIN
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2022-03-02
Authors: Quade, B., Borek, D., Otwinowski, Z., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 7u5v: Crystal structure of the Mixed Lineage Leukaemia (MLL1) SET Domain with the cofactor product S-Adenosylhomocysteine and Borealin peptide
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2022-03-02
Authors: An, S., Cho, U.S., Oh, H., Sha, L., Xu, J., Kim, S., Yang, W., An, W., Dou, Y.
PDB entry 7u5w: Crystal Structure Analysis of human Carbonic anhydrase 2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2022-03-02
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 7u5x: Crystal Structure Analysis of human Carbonic anhydrase 2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.04 Å
Deposited: 2022-03-02
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 7u5y: Crystal structure of ribulose-phosphate 3-epimerase from Pseudomonas aeruginosa
Classification: ISOMERASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-03-02
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u5z: Crystal Structure of HIV-1 Reverse Transcriptase in Complex with JLJ353
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus type 1 BH10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-03-03
Authors: Hollander, K., Carter, Z., Jorgensen, W.L., Anderson, K.S.
PDB entry 7u60: Integrin alpha IIB beta3 complex with cRGDfV
Classification: CELL ADHESION/INHIBITOR
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2022-03-03
Authors: Zhu, J., Lin, F.Y., Zhu, J., Springer, T.A.
PDB entry 7u61: Crystal Structure of Anti-Nicotine Antibody NIC311 Fab Complexed with Nicotine
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-03-03
Authors: Rodarte, J.V., Pancera, M.P., Liban, T.L.
PDB entry 7u62: Crystal structure of Anti-Heroin Antibody HY4-1F9 Fab Complexed with Morphine
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2022-03-03
Authors: Rodarte, J.V., Pancera, M.P.
PDB entry 7u63: Crystal Structure Anti-Oxycodone Antibody HY2-A12 Fab Complexed with Oxycodone
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-03-03
Authors: Rodarte, J.V., Pancera, M.P., Weidle, C., Rupert, P.B., Strong, R.K.
PDB entry 7u64: Crystal Structure of Anti-Fentanyl Antibody HY6-F9.6 Fab Complexed with Fentanyl
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-03-03
Authors: Rodarte, J.V., Pancera, M.P.
PDB entry 7u65: Structure of E. coli dGTPase bound to T7 bacteriophage protein Gp1.2
Classification: HYDROLASE
Source organism: Escherichia coli str. K-12 substr. MG1655; Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-03-03
Authors: Klemm, B.P., Hsu, A.L., Borgnia, M.J., Schaaper, R.M.
PDB entry 7u66: Structure of E. coli dGTPase bound to T7 bacteriophage protein Gp1.2 and dGTP
Classification: HYDROLASE
Source organism: Escherichia coli str. K-12 substr. MG1655; Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-03-03
Authors: Klemm, B.P., Dillard, L.B., Borgnia, M.J., Schaaper, R.M.
PDB entry 7u67: Structure of E. coli dGTPase bound to T7 bacteriophage protein Gp1.2 and GTP
Classification: HYDROLASE
Source organism: Escherichia coli str. K-12 substr. MG1655; Escherichia phage T7
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-03-03
Authors: Klemm, B.P., Hsu, A.L., Borgnia, M.J., Schaaper, R.M.
PDB entry 7u68: Crystal structure of the Vitronectin hemopexin-like domain binding Sodium-2
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-03
Authors: Aleshin, A.E., Marassi, F.M.
PDB entry 7u69: Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with Phenethyl Piperidine-4-acrylhydroxamic Acid Inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-03-03
Authors: Herbst-Gervasoni, C.J., Christianson, D.W.
PDB entry 7u6a: Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with 3-thienylmethyl Benzhydroxamic Acid Inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-03-03
Authors: Herbst-Gervasoni, C.J., Christianson, D.W.
PDB entry 7u6b: Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with Indolethyl Piperidine-4-acrylhydroxamic Acid Inhibitor
Classification: HYDROLASE/INHIBITOR
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-03-03
Authors: Herbst-Gervasoni, C.J., Christianson, D.W.
PDB entry 7u6d: Head region of insulin receptor ectodomain (A-isoform) bound to the non-insulin agonist IM459
Classification: SIGNALING PROTEIN/AGONIST
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.03 Å
Deposited: 2022-03-03
Authors: Kirk, N.S., Lawrence, M.C.
PDB entry 7u6e: Head region of insulin receptor ectodomain (A-isoform) bound to the non-insulin agonist IM462
Classification: HORMONE/SIGNALING PROTEIN/AGONIST
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-03-03
Authors: Kirk, N.S., Lawrence, M.C.
PDB entry 7u6f: Mouse retromer (VPS26/VPS35/VPS29) heterotrimers
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2022-03-04
Authors: Kendall, A.K., Chandra, M., Jackson, L.P.
PDB entry 7u6g: Structure of PQS Response Protein PqsE(E182W,E280A) Variant
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-03-04
Authors: Jeffrey, P.D., Taylor, I.R., Bassler, B.L.
PDB entry 7u6h: HalD with ornithine and alpha-ketoglutarate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pseudomonas kilonensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-03-04
Authors: Swenson, C.V., Neugebauer, M.E., Kissman, E.N., Chang, M.C.Y.
PDB entry 7u6i: HalB with glycine and succinate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces wuyuanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-03-04
Authors: Neugebauer, M.E., Kissman, E.N., Chang, M.C.Y.
PDB entry 7u6j: HalB with lysine and succinate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Streptomyces wuyuanensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-04
Authors: Sumida, K.H., Neugebauer, M.E., Kissman, E.N., Chang, M.C.Y.
PDB entry 7u6k: Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence.
Classification: DNA BINDING PROTEIN/DNA
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2022-03-04
Authors: Ward, A.R., Snow, C.D.
PDB entry 7u6l: Pseudooxynicotine amine oxidase
Classification: FLAVOPROTEIN
Source organism: Pseudomonas putida S16
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-03-04
Authors: Choudhary, V., Stull, F., Wu, K.
PDB entry 7u6m: Albumin binding domain fused to a mutant of the Erwinia asparaginase
Classification: HYDROLASE
Source organism: Dickeya chrysanthemi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-03-04
Authors: Lavie, A., Nguyen, H.A.
PDB entry 7u6o: Glutamine Synthetase Type III from Ostreococcus tauri
Classification: LIGASE
Source organism: Ostreococcus tauri
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-03-04
Authors: Novikova, I.V., Powell, S.M., Evans, J.E.
PDB entry 7u6p: Structure of an intellectual disability-associated ornithine decarboxylase variant G84R
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-03-04
Authors: Zhou, X.E., Schultz, C.R., Powell, K.S., Henrickson, A., Lamp, J., Brunzelle, J.S., Demeler, B., Vega, I.E., Bachmann, A.S., Melcher, K.
PDB entry 7u6q: TEM-1 beta-lactamase
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-03-04
Authors: Ji, Z., Boxer, S.G., Mathews, I.I.
PDB entry 7u6r: Cryo-EM structure of PDF-2180 Spike glycoprotein
Classification: VIRAL PROTEIN
Source organism: Bat coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2022-03-05
Authors: Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 7u6u: Structure of an intellectual disability-associated ornithine decarboxylase variant G84R in complex with PLP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2022-03-06
Authors: Zhou, X.E., Schultz, C.R., Powell, K.S., Henrickson, A., Lamp, J., Brunzelle, J.S., Demeler, B., Vega, I.E., Bachmann, A.S., Melcher, K.
PDB entry 7u6v: Cryo-EM structure of Shiga toxin 2 in complex with the native ribosomal P-stalk
Classification: TOXIN
Source organism: Saccharomyces cerevisiae; Shigella dysenteriae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2022-03-06
Authors: Kulczyk, A.W.
PDB entry 7u6y: Cryo-EM structure of the pancreatic ATP-sensitive potassium channel in the presence of glibenclamide and ATP with Kir6.2-CTD in the down conformation
Classification: MEMBRANE PROTEIN
Source organism: Cricetus cricetus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.4 Å
Deposited: 2022-03-06
Authors: Shyng, S.L., Sung, M.W., Driggers, C.M.
PDB entry 7u6z: Pertussis toxin E129D NAD
Classification: TOXIN, TRANSFERASE
Source organism: Bordetella pertussis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.30002 Å
Deposited: 2022-03-06
Authors: Littler, D.R., Beddoe, T., Pulliainen, A., Rossjohn, J.
PDB entry 7u70: Crystal Structure of CTX-M-14 with compound 2
Classification: HYDROLASE/HYDROLASE inhibitor
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2022-03-07
Authors: Akhtar, A., Chen, Y.
PDB entry 7u71: Crystal Structure of Mouse Cadherin-23 EC13-15
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.975 Å
Deposited: 2022-03-07
Authors: De La Torre, P., Sandhu, J.S., Velez-Cortes, F., Sotomayor, M.
PDB entry 7u72: Human DNA polymerase eta-DNA ternary mismatch complex:ground state at pH7.0 (K+ MES) with 1 Ca2+ ion
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u73: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 0.5 mM Mn2+ for 1800s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.
PDB entry 7u74: Human DNA polymerase eta-DNA ternary mismatch complex:reaction with 0.5 mM Mn2+ for 1800s then with 10 mM Mn2+ for 30s
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2022-03-07
Authors: Chang, C., Gao, Y.