LiteFold/PDB huggingface dataset:
PDB entry 5j3b: Structure of translation elongation factor P from Acinetobacter baumannii
Classification: TRANSLATION
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-03-30
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5j3c: Thermus thermophilus 70S termination complex containing E. coli RF1
Classification: RIBOSOME
Source organism: Escherichia coli JJ1887; Escherichia coli O139:H28; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2016-03-30
Authors: Hoffer, E.D., Dunham, C.M.
PDB entry 5j3d: Crystal structure of human Fab 14N4 in complex with post-fusion RSV F
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human respiratory syncytial virus A
Experimental method: X-RAY DIFFRACTION
Resolution: 4.077 Å
Deposited: 2016-03-30
Authors: Mousa, J.J., Crowe, J.E.
PDB entry 5j3e: Crystal Structure of Human THYN1 protein in complex with 5-methylcytosine containing DNA
Classification: NUCLEAR PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-03-30
Authors: Halabelian, L., Tempel, W., Li, Y., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Structural Genomics Consortium (SGC)
PDB entry 5j3f: NMR solution structure of [Rp, Rp]-PT dsDNA
Classification: DNA
Source organism: Streptomyces lividans
Experimental method: SOLUTION NMR
Deposited: 2016-03-30
Authors: Lan, W., Hu, Z., Cao, C.
PDB entry 5j3g: Solution NMR structure of PT-free dsDNA from Streptomyces lividans
Classification: DNA
Source organism: Streptomyces lividans
Experimental method: SOLUTION NMR
Deposited: 2016-03-30
Authors: Lan, W., Cao, C.
PDB entry 5j3h: Human insulin receptor domains L1-CR in complex with peptide S519C16 and 83-7 Fv
Classification: HORMONE RECEPTOR/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.27 Å
Deposited: 2016-03-30
Authors: Lawrence, M., Menting, J., Lawrence, C.
PDB entry 5j3i: NMR solution structure of [Sp, Sp]-PT dsDNA
Classification: DNA
Source organism: Streptomyces lividans
Experimental method: SOLUTION NMR
Deposited: 2016-03-30
Authors: Lan, W., Hu, Z., Cao, C.
PDB entry 5j3j: Crystal Structure of human DPP-IV in complex with HL1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2016-03-31
Authors: Wu, F., Li, H., Zhao, Z., Zhu, L., Xu, H., Li, S.
PDB entry 5j3l: Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with 1-((2-cyclopentylethyl)sulfonyl)pyrrolidine at 1.66A resolution
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2016-03-31
Authors: Blaszczyk, M., Surade, S., Nikiforov, P.O., Abell, C., Blundell, T.L.
PDB entry 5j3n: C-terminal domain of EcoR124I HsdR subunit fused with the pH-sensitive GFP variant ratiometric pHluorin
Classification: HYDROLASE
Source organism: Aequorea victoria; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2016-03-31
Authors: Grinkevich, P., Iermak, I., Luedtke, N., Mesters, J.R., Ettrich, R., Ludwig, J.
PDB entry 5j3o: Protruding domain of GII.4 human norovirus NSW0514 in complex with 3-fucosyllactose (3FL)
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2016-03-31
Authors: Singh, B.K., Hansman, G.S.
PDB entry 5j3p: Crystal structure of the catalytic domain of human tyrosyl DNA phosphodiesterase 2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2016-03-31
Authors: Hornyak, P., Pearl, L.H., Caldecott, K.W., Oliver, A.W.
PDB entry 5j3q: Crystal structure of S. pombe Dcp1:Edc1 mRNA decapping complex
Classification: HYDROLASE
Source organism: Schizosaccharomyces pombe; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2016-03-31
Authors: Valkov, E., Muthukumar, S., Chang, C.T., Jonas, S., Weichenrieder, O., Izaurralde, E.
PDB entry 5j3r: Crystal structure of yeast monothiol glutaredoxin Grx6 in complex with a glutathione-coordinated [2Fe-2S] cluster
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2016-03-31
Authors: Abdalla, M., Dai, Y.-N., Chi, C.-B., Cheng, W., Cao, D.-D., Zhou, K., Ali, W., Chen, Y., Zhou, C.-Z.
PDB entry 5j3s: Crystal structure of the catalytic domain of human tyrosyl DNA phosphodiesterase 2 in complex with a small molecule inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2016-03-31
Authors: Hornyak, P., Pearl, L.H., Caldecott, K.W., Oliver, A.W.
PDB entry 5j3t: Crystal structure of S. pombe Dcp2:Dcp1:Edc1 mRNA decapping complex
Classification: HYDROLASE
Source organism: Schizosaccharomyces pombe; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-03-31
Authors: Valkov, E., Muthukumar, S., Chang, C.T., Jonas, S., Weichenrieder, O., Izaurralde, E.
PDB entry 5j3u: Co-crystal structure of the regulatory domain of Toxoplasma gondii PKA with cAMP
Classification: TRANSFERASE
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-03-31
Authors: El Bakkouri, M., Walker, J.R., Tempel, W., Loppnau, P., Graslund, S., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Hui, R., Lin, L., Structural Genomics Consortium (SGC)
PDB entry 5j3v: Crystal structure of human Karyopherin-beta2 bound to the histone H3 tail
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2016-03-31
Authors: Soniat, M., Chook, Y.M.
PDB entry 5j3w: Crystal structures reveal signaling states of a short blue light photoreceptor protein PpSB1-LOV (dark state)
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas putida (strain KT2440)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2016-03-31
Authors: Granzin, J., Batra-Safferling, R.
PDB entry 5j3x: Structure of c-CBL Y371F
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.822 Å
Deposited: 2016-03-31
Authors: Huang, D.T., Buetow, L., Dou, H.
PDB entry 5j3y: Crystal structure of S. pombe Dcp2:Dcp1 mRNA decapping complex
Classification: HYDROLASE
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.288 Å
Deposited: 2016-03-31
Authors: Valkov, E., Muthukumar, S., Chang, C.T., Jonas, S., Weichenrieder, O., Izaurralde, E.
PDB entry 5j3z: Crystal structure of m2hTDP2-CAT in complex with a small molecule inhibitor
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-03-31
Authors: Hornyak, P., Pearl, L.H., Caldecott, K.W., Oliver, A.W.
PDB entry 5j40: The X-ray structure of JCV Helicase
Classification: HYDROLASE/INHIBITOR
Source organism: JC polyomavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2016-03-31
Authors: Ter Haar, E.
PDB entry 5j41: Glutathione S-transferase bound with hydrolyzed Piperlongumine
Classification: transferase/transferase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19035 Å
Deposited: 2016-03-31
Authors: Harshbarger, W., Gondi, S., Ficarro, S., Hunter, J., Udayakumar, D., Gurbani, D., Marto, J., Westover, K.
PDB entry 5j42: Crystal structure of m2hTDP2-CAT in complex with a small molecule inhibitor
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-03-31
Authors: Hornyak, P., Pearl, L.H., Caldecott, K.W., Oliver, A.W.
PDB entry 5j43: CdiA-CT from uropathogenic Escherichia coli in complex with CysK
Classification: TOXIN
Source organism: Escherichia coli O157:H7; Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-03-31
Authors: Morse, R.P., Goulding, C.W., Johnson, P.M.
PDB entry 5j44: Crystal structure of the Secreted Extracellular protein A (SepA) from Shigella flexneri
Classification: HYDROLASE
Source organism: Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.912 Å
Deposited: 2016-03-31
Authors: Birtley, J.R., Stern, L.J., McCormick, B., Maldonado-Contreras, A.
PDB entry 5j45: Crystal structure of Shrub, fly ortholog of SNF7/CHMP4B
Classification: TRANSPORT PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.758 Å
Deposited: 2016-03-31
Authors: McMillan, B.J., Blacklow, S.C.
PDB entry 5j46: Crystal structure of a Peptide Deformylase from Burkholderia multivorans
Classification: HYDROLASE
Source organism: Burkholderia multivorans (strain ATCC 17616 / 249)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-03-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5j47: The X-ray structure of Inhibitor Bound to JCV Helicase
Classification: HYDROLASE/INHIBITOR
Source organism: JC polyomavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2016-03-31
Authors: Ter Haar, E.
PDB entry 5j48: PKG I's Carboyl Terminal Cyclic Nucleotide Binding Domain (CNB-B) in a complex with 8-pCPT-cGMP
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2016-03-31
Authors: Campbell, J.C., Sankaran, B., Kim, C.W.
PDB entry 5j49: Crystal structure of UDP-glucose pyrophosporylase / UTP-glucose-1-phosphate uridylyltransferase from Burkholderia xenovorans
Classification: TRANSFERASE
Source organism: Burkholderia xenovorans (strain LB400)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-03-31
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5j4a: CdiA-CT toxin from Burkholderia pseudomallei E479 in complex with cognate CdiI immunity protein
Classification: TOXIN
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.004 Å
Deposited: 2016-03-31
Authors: Goulding, C.W., Johnson, P.M.
PDB entry 5j4b: Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-03-31
Authors: Melnikov, S.V., Soll, D., Steitz, T.A., Polikanov, Y.S.
PDB entry 5j4c: Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-03-31
Authors: Melnikov, S.V., Soll, D., Steitz, T.A., Polikanov, Y.S.
PDB entry 5j4d: E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon
Classification: RIBOSOME
Source organism: Escherichia coli (strain K12); Escherichia coli K-12; Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039); Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579); Thermus thermophilus HB27; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2016-03-31
Authors: Svidritskiy, E., Korostelev, A.A.
PDB entry 5j4e: Crystal structures reveal signaling states of a short blue light photoreceptor protein PpSB1-LOV (Photoexcited state)
Classification: SIGNALING PROTEIN
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2016-04-01
Authors: Granzin, J., Batra-Safferling, R.
PDB entry 5j4f: Crystal structure of the N-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
Classification: UNKNOWN FUNCTION
Source organism: Helicobacter pylori (strain ATCC 700392 / 26695)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2016-04-01
Authors: Sim, D.-W., Lee, W.-C., Kim, H.Y., Kim, J.-H., Won, H.-S.
PDB entry 5j4g: Crystal structure of the C-terminally His6-tagged HP0902, an uncharacterized protein from Helicobacter pylori 26695
Classification: UNKNOWN FUNCTION
Source organism: Helicobacter pylori (strain ATCC 700392 / 26695)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-04-01
Authors: Sim, D.W., Lee, W.C., Kim, H.Y., Kim, J.H., Won, H.S.
PDB entry 5j4h: Structure of humanised RadA-mutant humRadA22F in complex with indole-6-carboxylic acid
Classification: HYDROLASE
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.374 Å
Deposited: 2016-04-01
Authors: Fischer, G., Marsh, M., Moschetti, T., Sharpe, T., Scott, D., Morgan, M., Ng, H., Skidmore, J., Venkitaraman, A., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 5j4i: Crystal Structure of the L-arginine/agmatine antiporter from E. coli at 2.2 Angstroem resolution
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.207 Å
Deposited: 2016-04-01
Authors: Jeckelmann, J.M., Ilgue, H., Fotiadis, D.
PDB entry 5j4k: Structure of humanised RadA-mutant humRadA22F in complex with 1-Indane-6-carboxylic acid
Classification: HYDROLASE
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.346 Å
Deposited: 2016-04-01
Authors: Fischer, G., Marsh, M., Moschetti, T., Sharpe, T., Scott, D., Morgan, M., Ng, H., Skidmore, J., Venkitaraman, A., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 5j4l: Apo-structure of humanised RadA-mutant humRadA22F
Classification: HYDROLASE
Source organism: Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2016-04-01
Authors: Fischer, G., Marsh, M., Moschetti, T., Sharpe, T., Scott, D., Morgan, M., Ng, H., Skidmore, J., Venkitaraman, A., Abell, C., Blundell, T.L., Hyvonen, M.
PDB entry 5j4m: Crystal structure of shaft pilin SpaA from Lactobacillus rhamnosus GG - E269A/D295N double mutant
Classification: CELL ADHESION
Source organism: Lactobacillus rhamnosus GG
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2016-04-01
Authors: Chaurasia, P., Pratap, S., von Ossowski, I., Palva, A., Krishnan, V.
PDB entry 5j4n: Crystal structure of the L-arginine/agmatine antiporter AdiC in complex with agmatine at 2.6 Angstroem resolution
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.594 Å
Deposited: 2016-04-01
Authors: Jeckelmann, J.M., Ilgue, H., Fotiadis, D.
PDB entry 5j4o: Structure of human erythrocytic Spectrin alpha chain repeats 16-17
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2016-04-01
Authors: Cutts, E.E., Vakonakis, I.
PDB entry 5j4p: DIY G-Quadruplexes: Solution structure of d(GGTTTGGTTTTGGTTTGG) in sodium
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-04-01
Authors: Dvorkin, S.A., Webba da Silva, M.
PDB entry 5j4q: alpha-chymotrypsin from bovine pancreas in complex with Bowman-Birk inhibitor from soybean
Classification: HYDROLASE
Source organism: Bos taurus; Glycine max
Experimental method: X-RAY DIFFRACTION
Resolution: 2.303 Å
Deposited: 2016-04-01
Authors: Johansson, E., Tornoee, C.W.
PDB entry 5j4r: WELO5 SMALL MOLECULE HALOGENASE WITH NI(II) AND 2-OXOGLUTARATE
Classification: HYDROLASE
Source organism: Hapalosiphon welwitschii UTEX B 1830
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-04-01
Authors: McDonough, M.A., Gallimore, E., Clifton, I.J., Schofield, C.J.
PDB entry 5j4s: alpha-chymotrypsin from bovine pancreas in complex with a modified Bowman-Birk inhibitor from soybean
Classification: HYDROLASE
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.103 Å
Deposited: 2016-04-01
Authors: Johansson, E., Tornoee, C.W.
PDB entry 5j4t: Structure of tetrameric jacalin complexed with GlcNAc beta-(1,3) Gal-beta-OMe
Classification: SUGAR BINDING PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2016-04-01
Authors: Abhinav, K.V., Sharma, K., Surolia, A., Vijayan, M.
PDB entry 5j4u: Crystal structure of a glutathione S-transferase PtGSTU30 from Populus trichocarpa in complex with GSH
Classification: TRANSFERASE
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.249 Å
Deposited: 2016-04-01
Authors: Yang, Q., Gu, J., Yang, M., Zeng, Q.
PDB entry 5j4v: The crystal structure of Inhibitor Bound to JCV Helicase
Classification: HYDROLASE/INHIBITOR
Source organism: JC polyomavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2016-04-01
Authors: Ter Haar, E.
PDB entry 5j4w: DIY G-Quadruplexes: Solution structure of d(GGTTTGGTTTTGGTTGG) in sodium
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-04-01
Authors: Dvorkin, S.A., Webba da Silva, M.
PDB entry 5j4x: Structure of tetrameric jacalin complexed with Gal beta-(1,3) Gal-beta-OMe
Classification: SUGAR BINDING PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-04-01
Authors: Abhinav, K.V., Sharma, K., Surolia, A., Vijayan, M.
PDB entry 5j4y: The crystal structure of N-(4-(2-(thiazolo[5,4-c]pyridin-2-yl)phenoxy)phenyl)acetamide bound to JCV Helicase
Classification: HYDROLASE/INHIBITOR
Source organism: JC polyomavirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2016-04-01
Authors: Ter Haar, E.
PDB entry 5j4z: Architecture of tight respirasome
Classification: ELECTRON TRANSPORT
Source organism: Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.8 Å
Deposited: 2016-04-01
Authors: Letts, J.A., Fiedorczuk, K., Sazanov, L.A.
PDB entry 5j50: Structure of tetrameric jacalin complexed with Gal beta-(1,3) GalNAc-alpha-OPNP
Classification: SUGAR BINDING PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2016-04-01
Authors: Abhinav, K.V., Sharma, K., Surolia, A., Vijayan, M.
PDB entry 5j51: Structure of tetrameric jacalin complexed with Gal alpha-(1,4) Gal
Classification: SUGAR BINDING PROTEIN
Source organism: Artocarpus integer
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2016-04-01
Authors: Abhinav, K.V., Sharma, K., Surolia, A., Vijayan, M.
PDB entry 5j53: The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Novosphingobium aromaticivorans (strain DSM 12444 / F199)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2016-04-01
Authors: McAndrew, R.P., Pereira, J.H., Sathitsuksanoh, N., Sale, K.L., Simmons, B.A., Adams, P.D.
PDB entry 5j54: The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Novosphingobium aromaticivorans (strain DSM 12444 / F199)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2016-04-01
Authors: McAndrew, R.P., Pereira, J.H., Sathitsuksanoh, N., Sale, K.L., Simmons, B.A., Adams, P.D.
PDB entry 5j55: The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Novosphingobium aromaticivorans (strain DSM 12444 / F199)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2016-04-01
Authors: McAndrew, R.P., Pereira, J.H., Sathitsuksanoh, N., Sale, K.L., Simmons, B.A., Adams, P.D.
PDB entry 5j56: RTA-V1C7
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Ricinus communis; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2016-04-01
Authors: Rudolph, M.J.
PDB entry 5j57: V5E1-RTA complex
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Ricinus communis; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-04-01
Authors: Rudolph, M.J.
PDB entry 5j58: Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor (Chem 1856)
Classification: Ligase/Ligase Inhibitor
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-04-01
Authors: Barros-Alvarez, X., Hol, W.G.J.
PDB entry 5j59: Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor (Chem 1893)
Classification: Ligase/Ligase Inhibitor
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-04-01
Authors: Barros-Alvarez, X., Hol, W.G.J.
PDB entry 5j5a: Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor (Chem 70786556)
Classification: Ligase/Ligase Inhibitor
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-04-01
Authors: Barros-Alvarez, X., Koh, C.Y., Hol, W.G.J.
PDB entry 5j5b: Structure of the WT E coli ribosome bound to tetracycline
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-04-01
Authors: Cocozaki, A., Ferguson, A.
PDB entry 5j5c: Crystal structure of ARL1-GTP and DCB domain of BIG1 complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2016-04-02
Authors: Wang, R., Wang, Z., Zhang, T., Ding, J.
PDB entry 5j5d: Crystal structure of Dihydrodipicolinate Synthase from Mycobacterium tuberculosis in complex with alpha-ketopimelic acid
Classification: LYASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-04-02
Authors: Navratna, V., Gopal, B.
PDB entry 5j5e: crystal structure of antigen-ERAP1 domain complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-04-02
Authors: Sui, L., Gandhi, A., Guo, H.-C.
PDB entry 5j5f: X-Ray Crystal Structure of Acetylcholine Binding Protein (AChBP) in Complex with N4,N4-bis[(pyridin-2-yl)methyl]-6-(thiophen-3-yl)pyrimidine-2,4-diamine
Classification: ACETYLCHOLINE-BINDING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2016-04-02
Authors: Kaczanowska, K., Camacho Hernandez, G.A., Harel, M., Taylor, P.
PDB entry 5j5g: X-Ray Crystal Structure of Acetylcholine Binding Protein (AChBP) in Complex with 6-(4-methoxyphenyl)-N4,N4-bis[(pyridin-2-yl)methyl]pyrimidine-2,4-diamine
Classification: ACETYLCHOLINE-BINDING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.036 Å
Deposited: 2016-04-02
Authors: Kaczanowska, K., Harel, M., Camacho Hernandez, A.G., Taylor, P.
PDB entry 5j5h: X-RAY STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP) IN COMPLEX WITH 6-(2-methoxyphenyl)-N4,N4-bis[(pyridin-2-yl)methyl]pyrimidine-2,4-diamine
Classification: ACETYLCHOLINE-BINDING PROTEIN
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-04-02
Authors: Kaczanowska, K., Harel, M., Camacho Hernandez, A.G., Taylor, P.
PDB entry 5j5i: X-Ray Crystal Structure of Acetylcholine Binding Protein (AChBP) in Complex with 4-(2-amino-6-{bis[(pyridin-2-yl)methyl]amino}pyrimidin-4-yl)phenol
Classification: ACETYLCHOLINE-BINDING PROTEIN, AChBP
Source organism: Lymnaea stagnalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.326 Å
Deposited: 2016-04-02
Authors: Kaczanowska, K., Harel, M., Camacho Hernandez, G.A., Taylor, P.
PDB entry 5j5j: Crystal structure of a chimera of human Desmocollin-2 EC1 and human Desmoglein-2 EC2-EC5
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2016-04-02
Authors: Brasch, J., Harrison, O.J., Shapiro, L.
PDB entry 5j5k: CRYSTAL STRUCTURE OF AFMP4P IN COMPLEX WITH PALMITIC ACID
Classification: LIPID BINDING PROTEIN
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-04-03
Authors: Zhang, H., Hao, Q.
PDB entry 5j5l: CRYSTAL STRUCTURE OF AFMP4P IN COMPLEX WITH ARACHIDONIC ACID
Classification: LIPID BINDING PROTEIN
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-04-03
Authors: Zhang, H., Hao, Q.
PDB entry 5j5n: Crystal structure of the R39W mutant of Populus trichocarpa glutathione transferase PtGSTU30 in complex with glutathione
Classification: TRANSFERASE
Source organism: Populus trichocarpa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.629 Å
Deposited: 2016-04-03
Authors: Yang, Q., Gu, J., Yang, M., Zeng, Q.
PDB entry 5j5o: Translation initiation factor 4E in complex with m7GppppG mRNA 5' cap analog
Classification: TRANSLATION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.867 Å
Deposited: 2016-04-03
Authors: Warminski, M., Nowak, E., Rydzik, A.M., Kowalska, J., Jemielity, J., Nowotny, M.
PDB entry 5j5p: AMP-PNP-stabilized ATPase domain of topoisomerase IV from Streptococcus pneumoniae, complex type I
Classification: ISOMERASE/DNA
Source organism: Streptococcus pneumoniae; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2016-04-03
Authors: Laponogov, I., Pan, X.-S., Skamrova, G., Umrekar, T., Fisher, L.M., Sanderson, M.R.
PDB entry 5j5q: AMP-PNP-stabilized ATPase domain of topoisomerase IV from Streptococcus pneumoniae, complex type II
Classification: ISOMERASE/DNA
Source organism: Streptococcus pneumoniae; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2016-04-03
Authors: Laponogov, I., Pan, X.-S., Skamrova, G., Umrekar, T., Fisher, L.M., Sanderson, M.R.
PDB entry 5j5r: M. thermoresistible GuaB2 delta-CBS in complex with inhibitor VCC234718
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium thermoresistibile ATCC 19527
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2016-04-03
Authors: Pacitto, A., Ascher, D.B., Blundell, T.L.
PDB entry 5j5s: Src kinase in complex with a sulfonamide inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.153 Å
Deposited: 2016-04-03
Authors: Lebedev, I., Feldman, H.C., Georghiou, G., Maly, D.J., Seeliger, M.
PDB entry 5j5t: GLK co-crystal structure with aminopyrrolopyrimidine inhibitor
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2016-04-03
Authors: Silvian, L.F., Marcotte, D.
PDB entry 5j5u: Fjoh_4561 chitin-binding protein
Classification: CHITIN-BINDING PROTEIN
Source organism: Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-04-03
Authors: Koropatkin, N.M.
PDB entry 5j5v: CdiA-CT from uropathogenic Escherichia coli in complex with cognate immunity protein and CysK
Classification: TOXIN
Source organism: Escherichia coli O157:H7; Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2016-04-04
Authors: Goulding, C.W., Johnson, P.M., Morse, R.P.
PDB entry 5j5x: Complex of PKA with the bisubstrate protein kinase inhibitor ARC-1416
Classification: TRANSFERASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-04-04
Authors: Alam, K.A., Ivan, T., Uri, A., Engh, R.A.
PDB entry 5j5y: Translation initiation factor 4E in complex with m2(7,2'O)GppCCl2ppG mRNA 5' cap analog
Classification: TRANSLATION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2016-04-04
Authors: Warminski, M., Nowak, E., Rydzik, A.M., Kowalska, J., Jemielity, J., Nowotny, M.
PDB entry 5j5z: Crystal structure of the D444V disease-causing mutant of the human dihydrolipoamide dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2016-04-04
Authors: Szabo, E., Mizsei, R., Zambo, Z., Torocsik, B., Weiss, M.S., Adam-Vizi, V., Ambrus, A.
PDB entry 5j60: Structure of a thioredoxin reductase from Gloeobacter violaceus
Classification: OXIDOREDUCTASE
Source organism: Gloeobacter violaceus (strain PCC 7421)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-04
Authors: Buey, R.M., de Pereda, J.M., Balsera, M.
PDB entry 5j61: D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with glycyl-3'-aminoadenosine at 2.10 Angstrom resolution
Classification: HYDROLASE
Source organism: Plasmodium falciparum (isolate 3D7)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-04-04
Authors: Routh, S.B., Ahmad, S., Sankaranarayanan, R.
PDB entry 5j62: FMN-dependent Nitroreductase (CDR20291_0684) from Clostridium difficile R20291
Classification: OXIDOREDUCTASE
Source organism: Peptoclostridium difficile (strain R20291)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2016-04-04
Authors: Wang, B., Powell, S.M., Hessami, N., Najar, F.Z., Thomas, L.M., West, A.H., Karr, E.A., Richter-Addo, G.B.
PDB entry 5j63: Crystal Structure of the N-terminal N-formyltransferase Domain (residues 1-306) of Escherichia coli Arna in Complex with UDP-Ara4N and Folinic Acid
Classification: TRANSFERASE
Source organism: Escherichia coli H736
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-04-04
Authors: Thoden, J.B., Genthe, N.A., Holden, H.M.
PDB entry 5j64: Crystal Structure of Hsp90-alpha N-domain in complex with 5-(2,4-Dihydroxy-phenyl)-4-(2-fluoro-phenyl)-2,4-dihydro-[1,2,4]triazol-3-one
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2016-04-04
Authors: Amaral, M., Matias, P.
PDB entry 5j67: Structure of Astrotactin-2, a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2016-04-04
Authors: Ni, T., Harlos, K., Gilbert, R.J.C.
PDB entry 5j68: Structure of Astrotactin-2, a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 5.221 Å
Deposited: 2016-04-04
Authors: Ni, T., Harlos, K., Gilbert, R.J.C.
PDB entry 5j69: Structure of Astrotactin-2, a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.63 Å
Deposited: 2016-04-04
Authors: Ni, T., Harlos, K., Gilbert, R.J.C.
PDB entry 5j6a: Crystal structure of pyruvate dehydrogenase kinase isoform 2 in complex with inhibitor PS46
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.045 Å
Deposited: 2016-04-04
Authors: Gui, W.J., Tso, S.C., Chuang, J.L., Wu, C.Y., Qi, X., Wynn, R.M., Chuang, D.T.
PDB entry 5j6b: Crystal structure of Aldehyde dehydrogenase from Burkholderia thailandensis in covelent complex with NADPH
Classification: OXIDOREDUCTASE
Source organism: Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2016-04-04
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5j6c: FMN-dependent Nitroreductase (CDR20291_0767) from Clostridium difficile R20291
Classification: OXIDOREDUCTASE
Source organism: Peptoclostridium difficile (strain R20291)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.096 Å
Deposited: 2016-04-04
Authors: Powell, S.M., Wang, B., Hessami, N., Najar, F.Z., Thomas, L.M., West, A.H., Karr, E.A., Richter-Addo, G.B.
PDB entry 5j6d: Discovery of acyl guanidine tryptophan hydroxylase-1 inhibitors
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-04
Authors: Stein, A.J., Goldberg, D.R., De Lombaert, S.
PDB entry 5j6e: Structure of disulfide crosslinked A. fumigatus FKBP12(V91C)
Classification: ISOMERASE
Source organism: Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2016-04-04
Authors: Schumacher, M.
PDB entry 5j6f: Crystal structure of DAH7PS-CM complex from Geobacillus sp. with prephenate
Classification: TRANSFERASE,ISOMERASE
Source organism: Geobacillus sp. GHH01
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2016-04-04
Authors: Nazmi, A.R., Othman, M., Lang, E.J.M., Bai, Y., Allison, T.M., Panjkar, S., Arcus, V.L., Parker, E.J.
PDB entry 5j6g: Recognition of the MHC class Ib molecule H2-Q10 by the natural killer cell receptor Ly49C
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2016-04-04
Authors: Berry, R., Rossjohn, J.
PDB entry 5j6h: Recognition of the MHC class Ib molecule H2-Q10 by the natural killer cell receptor Ly49C
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-04-05
Authors: Berry, R., Rossjohn, J.
PDB entry 5j6l: Crystal Structure of Hsp90-alpha N-domain in complex with N-Butyl-5-[4-(2-fluoro-phenyl)-5-oxo-4,5-dihydro-1H-[1,2,4]triazol-3-yl]-2,4-dihydroxy-N-methyl-benzamide
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2016-04-05
Authors: Amaral, M., Matias, P.
PDB entry 5j6m: Crystal Structure of Hsp90-alpha N-domain L107 mutant in complex with 5-[4-(2-Fluoro-phenyl)-5-oxo-4,5-dihydro-1H-[1,2,4]triazol-3-yl]-N-furan-2-ylmethyl-2,4-dihydroxy-N-methyl-benzamide
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2016-04-05
Authors: Amaral, M., Matias, P.
PDB entry 5j6n: Crystal Structure of Hsp90-alpha N-domain L107A mutant in complex with 5-[4-(2-Fluoro-phenyl)-5-oxo-4,5-dihydro-1H-[1,2,4]triazol-3-yl]-2,4-dihydroxy-N-methyl-N-propyl-benzenesulfonamide
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-05
Authors: Amaral, M., Matias, P.
PDB entry 5j6o: Crystal structure of a trans-AT PKS dehydratase domain of C0ZGQ7 from Brevibacillus brevis
Classification: LYASE
Source organism: Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.195 Å
Deposited: 2016-04-05
Authors: Jakob, R.P., Herbst, D.A., Maier, T.
PDB entry 5j6p: Crystal Structure of Mis18(17-118) from Schizosaccharomyces pombe
Classification: CELL CYCLE
Source organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2016-04-05
Authors: Wang, C., Shao, C., Zhang, M., Zhang, X., Zang, J.
PDB entry 5j6q: Cwp8 from Clostridium difficile
Classification: CELL ADHESION
Source organism: Peptoclostridium difficile (strain 630)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-04-05
Authors: Renko, M., Usenik, A., Turk, D.
PDB entry 5j6r: Crystal structure of Human Papillomavirus Type 59 L1 pentamer
Classification: VIRAL PROTEIN
Source organism: Human papillomavirus type 59
Experimental method: X-RAY DIFFRACTION
Resolution: 4.011 Å
Deposited: 2016-04-05
Authors: Li, Z.H., Yan, X.D., Yu, H., Gu, Y., Li, S.W.
PDB entry 5j6s: Crystal structure of Endoplasmic Reticulum Aminopeptidase 2 (ERAP2) in complex with a hydroxamic derivative ligand
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2016-04-05
Authors: Saridakis, E., Giastas, P., Mpakali, A., Deprez-Poulain, R., Stratikos, E.
PDB entry 5j6t: NMR structures of hylin-a1 analogs: Hylin-Ac
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2016-04-05
Authors: Crusca Jr., E., Matos, C.O., Liao, L.M., Oliveira, A.L.
PDB entry 5j6u: DIY G-Quadruplexes: Solution Structure of d(GGGGTTTGGGGTTTTGGGGAAGGGG) in sodium
Classification: DNA
Experimental method: SOLUTION NMR
Deposited: 2016-04-05
Authors: Dvorkin, S.A., Karsisiotis, A.I., Webba da Silva, M.
PDB entry 5j6v: NMR structures of hylin-a1 analogs: Hylin-D
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2016-04-05
Authors: Crusca Jr., E., Matos, C.O., Liao, L.M., Oliveira, A.L.
PDB entry 5j6w: NMR structures of hylin-a1 analogs: Hylin-K
Classification: ANTIMICROBIAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2016-04-05
Authors: Crusca Jr., E., Matos, C.O., Liao, L.M., Oliveira, A.L.
PDB entry 5j6x: Crystal structure of the apo-Zalpha of Zebrafish PKZ
Classification: DNA BINDING PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.493 Å
Deposited: 2016-04-05
Authors: Subramani, V.K., Kim, D., Kim, K.K.
PDB entry 5j6y: Crystal structure of PA14 domain of MpAFP Antifreeze protein
Classification: CELL ADHESION
Source organism: Marinomonas primoryensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2016-04-05
Authors: Guo, S.
PDB entry 5j6z: Structure of anastellin bound to beta-strands A and B from the third type III domain of fibronectin
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2016-04-05
Authors: Stine, J.M., Briknarova, K.
PDB entry 5j70: The Chd1 DNA-binding domain in complex with 17mer DNA duplex
Classification: chromatin-binding protein/DNA
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.956 Å
Deposited: 2016-04-05
Authors: Bowman, G.D., Jenkins, K.R., Hauk, G.
PDB entry 5j71: Crystal structure of pyruvate dehydrogenase kinase isoform 2 in complex with inhibitor PS35
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2016-04-05
Authors: Gui, W.J., Tso, S.C., Chuang, J.L., Wu, C.Y., Qi, X., Wynn, R.M., Chuang, D.T.
PDB entry 5j72: Cwp6 from Clostridium difficile
Classification: HYDROLASE
Source organism: Peptoclostridium difficile (strain 630)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2016-04-05
Authors: Renko, M., Usenik, A., Turk, D.
PDB entry 5j73: De novo design of protein homo-oligomers with modular hydrogen bond network-mediated specificity
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2016-04-05
Authors: Sankaran, B., Zwart, P.H., Pereira, J.H., Baker, D., Boyken, S., Chen, Z., Groves, B., Langan, R.A., Oberdorfer, G., Ford, A., Gilmore, J., Xu, C., DiMaio, F., Seelig, G.
PDB entry 5j74: Fluorogen activating protein AM2.2 in complex with TO1-2p
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2016-04-05
Authors: Stanfield, R.L., Wilson, I.A., Wu, Y.
PDB entry 5j75: Fluorogen Activating Protein AM2.2 in complex with ML342
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-04-05
Authors: Stanfield, R.L., Wilson, I.A., Wu, Y.
PDB entry 5j76: Structure of Lectin from Colocasia esculenta(L.) Schott
Classification: SUGAR BINDING PROTEIN
Source organism: Colocasia esculenta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-04-06
Authors: Vajravijayan, S., Pletnev, S., Nandhagopal, N., Gunasekaran, K.
PDB entry 5j77: Mutant glyceraldehyde dehydrogenase (F34M+S405N) from Thermoplasma acidophilum
Classification: OXIDOREDUCTASE
Source organism: Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-04-06
Authors: Iermak, I., Mesters, J.R., Kuta Smatanova, I.
PDB entry 5j78: Crystal structure of an Acetylating Aldehyde Dehydrogenase from Geobacillus thermoglucosidasius
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermoglucosidasius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2016-04-06
Authors: Crennell, S.J., Extance, J.P., Danson, M.J.
PDB entry 5j79: The identification and pharmacological characterization of 6-(tert-butylsulfonyl)-N-(5-fluoro-1H-indazol-3-yl)quinolin-4-amine (GSK583), a highly potent and selective inhibitor of RIP2 Kinase, Compound 3 complex
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2016-04-06
Authors: Convery, M.A., Casillas, L.N., Haile, P.A., Votta, B.J., Lakdawala, A.S.
PDB entry 5j7a: Bacteriorhodopsin ground state structure obtained with Serial Femtosecond Crystallography
Classification: PROTON TRANSPORT
Source organism: Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2016-04-06
Authors: Nogly, P., Panneels, V., Nelson, G., Gati, C., Kimura, T., Milne, C., Milathianaki, D., Kubo, M., Wu, W., Conrad, C., Coe, J., Bean, R., Zhao, Y., Bath, P., Dods, R., Harimoorthy, R., Beyerlein, K.R., Rheinberger, J., James, D., DePonte, D., Li, C., Sala, L., Williams, G., Hunter, M., Koglin, J.E., Berntsen, P., Nango, E., Iwata, S., Chapman, H.N., Fromme, P., Frank, M., Abela, R., Boutet, S., Barty, A., White, T.A., Weierstall, U., Spence, J., Neutze, R., Schertler, G., Standfuss, J.
PDB entry 5j7b: The identification and pharmacological characterization of 6-(tert-butylsulfonyl)-N-(5-fluoro-1H-indazol-3-yl)quinolin-4-amine (GSK583), a highly potent and selective inhibitor of RIP2 Kinase, GSK583 complex
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2016-04-06
Authors: Convery, M.A., Casillas, L.N., Haile, P.A., Votta, B.J., Lakdawala, A.S.
PDB entry 5j7c: A picomolar affinity FN3 domain in complex with hen egg-white lysozyme
Classification: protein binding/hydrolase
Source organism: Gallus gallus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.535 Å
Deposited: 2016-04-06
Authors: Porebski, B.T., Drinkwater, N., McGowan, S., Buckle, A.M.
PDB entry 5j7d: Computationally Designed Thioredoxin dF106
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2016-04-06
Authors: Horowitz, S., Johansen, N., Olsen, J.G., Winther, J.R.
PDB entry 5j7e: hEAG PAS domain
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2016-04-06
Authors: Xue, T., Juan, S., Xiaohong, Q.
PDB entry 5j7f: Structure of MDM2 with low molecular weight inhibitor with aliphatic linker.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2016-04-06
Authors: Twarda-Clapa, A., Kubica, K., Guzik, K., Dubin, G., Holak, T.A.
PDB entry 5j7g: Structure of MDM2 with low molecular weight inhibitor with aliphatic linker.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-04-06
Authors: Twarda-Clapa, A., Kubica, K., Guzik, K., Dubin, G., Holak, T.A.
PDB entry 5j7i: Crystal structure of a Geobacillus thermoglucosidasius Acetylating Aldehyde Dehydrogenase in complex with ADP
Classification: OXIDOREDUCTASE
Source organism: Geobacillus thermoglucosidasius (strain C56-YS93)
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2016-04-06
Authors: Crennell, S.J., Extance, J.P., Danson, M.J.
PDB entry 5j7j: NMR Derived Structure of Ca2+ Calmodulin bound to Phosphorylated PSD-95
Classification: METAL BINDING PROTEIN
Source organism: Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2016-04-06
Authors: Turner, M.L., Ames, J.B., Anderson, D.E.
PDB entry 5j7k: Loop grafting onto a highly stable FN3 scaffold
Classification: PROTEIN BINDING
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2016-04-06
Authors: Porebski, B.T., Drinkwater, N., McGowan, S., Buckle, A.M.
PDB entry 5j7l: Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
Classification: RIBOSOME/ANTIBIOTIC
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2016-04-06
Authors: Cocozaki, A., Ferguson, A.
PDB entry 5j7m: Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836
Classification: UNKNOWN FUNCTION
Source organism: Kribbella flavida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2016-04-06
Authors: Chang, C., Cuff, M., Chhor, G., Endres, M., Joachimiak, A.
PDB entry 5j7n: Crystal structure of a small heat-shock protein from Xylella fastidiosa reveals a distinct high order structure
Classification: CHAPERONE
Source organism: Xylella fastidiosa (strain 9a5c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2016-04-06
Authors: Fonseca, E.M.B., Scorsato, V., dos Santos, C.A., Tomazini Jr., A., Aparicio, R., Polikarpov, I.
PDB entry 5j7o: Faustovirus major capsid protein
Classification: VIRAL PROTEIN
Source organism: Faustovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2016-04-06
Authors: Klose, T., Rossmann, M.G.
PDB entry 5j7p: Macrophage Migration Inhibitory Factor bound to Covalent Inhibitor RDR03785
Classification: Isomerase/Isomerase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2016-04-06
Authors: Robertson, M.J., Jorgensen, W.L.
PDB entry 5j7q: Macrophage Migration Inhibitory Factor bound to Inhibitor K664 Derivative
Classification: Isomerase/Isomerase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2016-04-06
Authors: Robertson, M.J., Jorgensen, W.L.
PDB entry 5j7r: 2.5 Angstrom Crystal Structure of Putative Lipoprotein from Clostridium perfringens
Classification: MEMBRANE PROTEIN
Source organism: Clostridium perfringens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2016-04-06
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Flores, K., Shatsman, S., Kwon, K., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 5j7s: Crystal structure of SM1-71 bound to TAK1-TAB1
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.368 Å
Deposited: 2016-04-06
Authors: Gurbani, D., Westover, K.D.
PDB entry 5j7t: Molecular Understanding of USP7 Substrate Recognition and C-Terminal Activation
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2001 Å
Deposited: 2016-04-06
Authors: Murray, J.M., Rouge, L.