LiteFold/PDB huggingface dataset:
PDB entry 2zw4: Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the orthorhombic crystal
Classification: TRANSFERASE
Source organism: Streptomyces verticillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-12-01
Authors: Oda, K., Matoba, Y., Sugiyama, M.
PDB entry 2zw5: Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the trigonal crystal
Classification: TRANSFERASE
Source organism: Streptomyces verticillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-12-01
Authors: Oda, K., Matoba, Y., Sugiyama, M.
PDB entry 2zw6: Crystal structure of bleomycin N-acetyltransferase from bleomycin-producing Streptomyces verticillus ATCC15003
Classification: TRANSFERASE
Source organism: Streptomyces verticillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-01
Authors: Oda, K., Matoba, Y., Sugiyama, M.
PDB entry 2zw7: Crystal structure of bleomycin N-acetyltransferase complexed with bleomycin A2 and coenzyme A
Classification: TRANSFERASE
Source organism: Streptomyces verticillus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-12-01
Authors: Oda, K., Matoba, Y., Sugiyama, M.
PDB entry 2zw9: Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-01
Authors: Suzuki, Y., Noma, A., Suzuki, T., Ishitani, R., Nureki, O.
PDB entry 2zwa: Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-01
Authors: Suzuki, Y., Noma, A., Suzuki, T., Ishitani, R., Nureki, O.
PDB entry 2zwb: Neutron crystal structure of wild type human lysozyme in D2O
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: NEUTRON DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-02
Authors: Chiba-Kamoshida, K., Matsui, T., Chatake, T., Ohhara, T., Ostermann, A., Tanaka, I., Yutani, K., Niimura, N.
PDB entry 2zwd: Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 5 minutes
Classification: OXIDOREDUCTASE/METAL TRANSPORT
Source organism: Streptomyces castaneoglobisporus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2008-12-03
Authors: Matoba, Y., Sugiyama, M.
PDB entry 2zwe: Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 40 minutes
Classification: OXIDOREDUCTASE/METAL TRANSPORT
Source organism: Streptomyces castaneoglobisporus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2008-12-03
Authors: Matoba, Y., Sugiyama, M.
PDB entry 2zwf: Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 80 minutes
Classification: OXIDOREDUCTASE/METAL TRANSPORT
Source organism: Streptomyces castaneoglobisporus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-12-03
Authors: Matoba, Y., Sugiyama, M.
PDB entry 2zwg: Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 12 hours
Classification: OXIDOREDUCTASE/METAL TRANSPORT
Source organism: Streptomyces castaneoglobisporus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2008-12-03
Authors: Matoba, Y., Sugiyama, M.
PDB entry 2zwh: Model for the F-actin structure
Classification: CONTRACTILE PROTEIN
Source organism: Oryctolagus cuniculus
Experimental method: FIBER DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-12-05
Authors: Oda, T., Iwasa, M., Aihara, T., Maeda, Y., Narita, A.
PDB entry 2zwi: Crystal structure of alpha/beta-Galactoside alpha-2,3-Sialyltransferase from a Luminous Marine Bacterium, <I>Photobacterium phosphoreum</I>
Classification: TRANSFERASE
Source organism: Photobacterium phosphoreum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2008-12-05
Authors: Iwatani, T., Okino, N., Sakakura, M., Kajiwara, H., Ichikawa, M., Takakura, Y., Kimura, M., Ito, M., Yamamoto, T., Kakuta, Y.
PDB entry 2zwj: Crystal structure of a hemoglobin component V from Propsilocerus akamusi (pH4.6 coordinates)
Classification: OXYGEN TRANSPORT
Source organism: Tokunagayusurika akamusi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2008-12-13
Authors: Kuwada, T., Hasegawa, T., Takagi, T., Shishikura, F.
PDB entry 2zwk: Crystal structure of intimin-Tir90 complex
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-12-16
Authors: Ma, Y., Gao, F., Li, D.-F., Gao, G.F.
PDB entry 2zwl: Human factor viia-tissue factor complexed with highly selective peptide inhibitor
Classification: HYDROLASE/BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-12-16
Authors: Kadono, S., Sakamoto, A., Kikuchi, Y., Oh-Eda, M., Yabuta, N., Koga, T., Hattori, K., Shiraishi, T., Haramura, M., Sato, H., Ohta, M., Kozono, T.
PDB entry 2zwm: Crystal structure of YycF receiver domain from Bacillus subtilis
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2008-12-16
Authors: Doi, A., Okajima, T., Utsumi, R.
PDB entry 2zwn: Crystal structure of the novel two-domain type laccase from a metagenome
Classification: OXIDOREDUCTASE
Source organism: metagenomes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-12-17
Authors: Komori, H., Miyazaki, K., Higuchi, Y.
PDB entry 2zwo: Crystal structure of Ca2 site mutant of Pro-S324A
Classification: HYDROLASE
Source organism: Thermococcus kodakaraensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2008-12-17
Authors: Takeuchi, Y., Tanaka, S., Matsumura, H., Koga, Y., Takano, K., Kanaya, S.
PDB entry 2zwp: Crystal structure of Ca3 site mutant of Pro-S324A
Classification: HYDROLASE
Source organism: Thermococcus kodakaraensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-12-17
Authors: Takeuchi, Y., Tanaka, S., Matsumura, H., Koga, Y., Takano, K., Kanaya, S.
PDB entry 2zwr: Crystal structure of TTHA1623 from thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-12-17
Authors: Yamamura, A., Okada, A., Kameda, Y., Ohtsuka, J., Nakagawa, N., Ebihara, A., Yokoyama, S., Kuramitsu, S., Nagata, K., Tanokura, M.
PDB entry 2zws: Crystal Structure Analysis of neutral ceramidase from Pseudomonas aeruginosa
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-12-17
Authors: Kakuta, Y., Okino, N., Inoue, T., Okano, H., Ito, M.
PDB entry 2zwt: Crystal Structure of Ferric Cytochrome P450cam
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2008-12-18
Authors: Sakurai, K., Shimada, H., Hayashi, T., Tsukihara, T.
PDB entry 2zwu: Crystal Structure of Camphor Soaked Ferric Cytochrome P450cam
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas Putida
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-12-18
Authors: Sakurai, K., Shimada, H., Hayashi, T., Tsukihara, T.
PDB entry 2zwv: Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-12-18
Authors: Wang, H., Kawazoe, M., Kaminishi, T., Tatsuguchi, A., Naoe, C., Terada, T., Shirouzu, M., Takemoto, C., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zwy: alpha-L-fucosidase
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2008-12-18
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zwz: alpha-L-fucosidase complexed with inhibitor, Core1
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2008-12-19
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zx0: Rhamnose-binding lectin CSL3
Classification: IMMUNE SYSTEM, SUGAR BINDING PROTEIN
Source organism: Oncorhynchus keta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-19
Authors: Shirai, T., Watababe, Y., Lee, M., Ogawa, T., Muramoto, K.
PDB entry 2zx1: Rhamnose-binding lectin CSL3
Classification: IMMUNE SYSTEM, SUGAR BINDING PROTEIN
Source organism: Oncorhynchus keta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-12-19
Authors: Shirai, T., Watababe, Y., Lee, M., Ogawa, T., Muramoto, K.
PDB entry 2zx2: Rhamnose-binding lectin CSL3
Classification: IMMUNE SYSTEM, SUGAR BINDING PROTEIN
Source organism: Oncorhynchus keta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-12-19
Authors: Shirai, T., Watababe, Y., Lee, M., Ogawa, T., Muramoto, K.
PDB entry 2zx3: Rhamnose-binding lectin CSL3
Classification: IMMUNE SYSTEM, SUGAR BINDING PROTEIN
Source organism: Oncorhynchus keta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-12-19
Authors: Shirai, T., Watababe, Y., Lee, M., Ogawa, T., Muramoto, K.
PDB entry 2zx4: Rhamnose-binding lectin CSL3
Classification: IMMUNE SYSTEM, SUGAR BINDING PROTEIN
Source organism: Oncorhynchus keta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-12-19
Authors: Shirai, T., Watababe, Y., Lee, M., Ogawa, T., Muramoto, K.
PDB entry 2zx5: alpha-L-fucosidase complexed with inhibitor, F10
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-12-19
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zx6: alpha-L-fucosidase complexed with inhibitor, F10-1C
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2008-12-19
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zx7: alpha-L-fucosidase complexed with inhibitor, F10-2C
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2008-12-19
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zx8: alpha-L-fucosidase complexed with inhibitor, F10-2C-O
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2008-12-19
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zx9: alpha-L-fucosidase complexed with inhibitor, B4
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2008-12-22
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zxa: alpha-L-fucosidase complexed with inhibitor, FNJ-acetyl
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.57 Å
Deposited: 2008-12-22
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zxb: alpha-L-fucosidase complexed with inhibitor, ph-6FNJ
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2008-12-22
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zxc: Ceramidase complexed with C2
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-12-22
Authors: Okano, H., Inoue, T., Okino, N., Kakuta, Y., Matsumura, H., Ito, M.
PDB entry 2zxd: alpha-L-fucosidase complexed with inhibitor, iso-6FNJ
Classification: HYDROLASE
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-12-22
Authors: Wu, H.-J., Ko, T.-P., Ho, C.-W., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zxe: Crystal structure of the sodium - potassium pump in the E2.2K+.Pi state
Classification: HYDROLASE/TRANSPORT PROTEIN
Source organism: Squalus acanthias
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-12-22
Authors: Shinoda, T., Ogawa, H., Cornelius, F., Toyoshima, C.
PDB entry 2zxf: Crystal structure of human glycyl-trna synthetase (GLYRS) in complex with AP4A (cocrystallized with AP4A)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2008-12-23
Authors: Guo, R.T., Yang, X.L., Schimmel, P.
PDB entry 2zxg: Aminopeptidase N complexed with the aminophosphinic inhibitor of PL250, a transition state analogue
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-12-24
Authors: Nakajima, Y., Ito, K., Yoshimoto, T.
PDB entry 2zxh: Structure of Aquifex aeolicus GidA in the form I crystal
Classification: FAD-BINDING PROTEIN
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-12-24
Authors: Numata, T., Osawa, T.
PDB entry 2zxi: Structure of Aquifex aeolicus GidA in the form II crystal
Classification: FAD-BINDING PROTEIN
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-12-24
Authors: Numata, T., Osawa, T.
PDB entry 2zxj: Crystal structure of YycF DNA-binding domain from Staphylococcus aureus
Classification: TRANSCRIPTION
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2008-12-26
Authors: Okajima, T., Doi, A., Utsumi, R.
PDB entry 2zxk: Crystal structure of SeMet-Red chlorophyll catabolite reductase
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-12-29
Authors: Sugishima, M., Kitamori, Y., Fukuyama, K.
PDB entry 2zxl: Crystal structure of red chlorophyll catabolite reductase from Arabidopsis thaliana
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-12-29
Authors: Sugishima, M., Kitamori, Y., Fukuyama, K.
PDB entry 2zxm: A New Class of Vitamin D Receptor Ligands that Induce Structural Rearrangement of the Ligand-binding Pocket
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2009-01-04
Authors: Nakabayashi, M., Ikura, T., Ito, N.
PDB entry 2zxn: A New Class of Vitamin D Receptor Ligands that Induce Structural Rearrangement of the Ligand-binding Pocket
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-01-04
Authors: Nakabayashi, M., Ikura, T., Ito, N.
PDB entry 2zxo: Crystal structure of RecJ from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-01-05
Authors: Wakamatsu, T., Kitamura, Y., Nakagawa, N., Masui, R., Kuramitsu, S.
PDB entry 2zxp: Crystal structure of RecJ in complex with Mn2+ from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-01-05
Authors: Wakamatsu, T., Kitamura, Y., Nakagawa, N., Masui, R., Kuramitsu, S.
PDB entry 2zxq: Crystal structure of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF)
Classification: HYDROLASE
Source organism: Bifidobacterium longum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-01-05
Authors: Suzuki, R., Katayama, T., Ashida, H., Yamamoto, K., Kitaoka, M., Fushinobu, S.
PDB entry 2zxr: Crystal structure of RecJ in complex with Mg2+ from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-01-05
Authors: Wakamatsu, T., Kitamura, Y., Nakagawa, N., Masui, R., Kuramitsu, S.
PDB entry 2zxt: Crystal structure of Tim40/MIA40, a disulfide relay system in mitochondria, solved as MBP fusion protein
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli (strain K12); Saccharomyces cerevisiae (strain ATCC 204508 / S288c); synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-01-07
Authors: Kawano, S., Momose, T., Watanabe, N., Endo, T.
PDB entry 2zxu: Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPP
Classification: TRANSFERASE/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2009-01-07
Authors: Sakai, J., Yao, M., Chimnaronk, S., Tanaka, I.
PDB entry 2zxv: Crystal structure of putative acetyltransferase from T. thermophilus HB8
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-01-08
Authors: Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zxw: Bovine heart cytochrome c oxidase at the fully oxidized state (1-s X-ray exposure dataset)
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-01-08
Authors: Aoyama, H., Muramoto, K., Shinzawa-Itoh, K., Hirata, K., Yamashita, E., Tsukihara, T., Ogura, T., Yoshikawa, S.
PDB entry 2zxx: Crystal structure of Cdt1/geminin complex
Classification: CELL CYCLE/REPLICATION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-01-08
Authors: Cho, Y., Lee, C., Hong, B.S., Choi, J.M.
PDB entry 2zxy: Crystal Structure of Cytochrome c555 from Aquifex aeolicus
Classification: OXYGEN BINDING, TRANSPORT PROTEIN
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2009-01-09
Authors: Obuchi, M., Kawahara, K., Motooka, D., Nakamura, S., Yamanaka, M., Takeda, T., Uchiyama, S., Kobayashi, Y., Ohkubo, T., Sambongi, Y.
PDB entry 2zxz: Crystal structure of the human RXR alpha ligand binding domain bound to a synthetic agonist compound and a coactivator peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-01-09
Authors: Sato, Y., Antony, P., Rochel, N., Moras, D., Structural Genomics Consortium for Research on Gene Expression (SGCGES)
PDB entry 2zy0: Crystal structure of the human RXR alpha ligand binding domain bound to a synthetic agonist compound and a coactivator peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-01-09
Authors: Sato, Y., Antony, P., Rochel, N., Moras, D., Structural Genomics Consortium for Research on Gene Expression (SGCGES)
PDB entry 2zy1: Crystal structure of the C(30) carotenoid dehydrosqualene synthase from Staphylococcus aureus complexed with bisphosphonate BPH-830
Classification: TRANSFERASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2009-01-10
Authors: Liu, C.I., Jeng, W.Y., Wang, A.H.J., Oldfield, E.
PDB entry 2zy2: dodecameric L-aspartate beta-decarboxylase
Classification: LYASE
Source organism: Pseudomonas sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2009-01-13
Authors: Chen, H.-J., Ko, T.-P., Lee, C.-Y., Wang, N.-C., Wang, A.H.-J.
PDB entry 2zy3: dodecameric L-aspartate beta-decarboxylase
Classification: LYASE
Source organism: Alcaligenes faecalis subsp. faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-01-13
Authors: Chen, H.-J., Ko, T.-P., Lee, C.-Y., Wang, N.-C., Wang, A.H.-J.
PDB entry 2zy4: dodecameric L-aspartate beta-decarboxylase
Classification: LYASE
Source organism: Alcaligenes faecalis subsp. faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-01-13
Authors: Chen, H.-J., Ko, T.-P., Lee, C.-Y., Wang, N.-C., Wang, A.H.-J.
PDB entry 2zy5: R487A mutant of L-aspartate beta-decarboxylase
Classification: LYASE
Source organism: Alcaligenes faecalis subsp. faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2009-01-13
Authors: Chen, H.-J., Ko, T.-P., Lee, C.-Y., Wang, N.-C., Wang, A.H.-J.
PDB entry 2zy6: Crystal structure of a truncated tRNA, TPHE39A
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-01-14
Authors: Tanaka, I., Yao, M., Tanaka, Y., Kitago, Y., Ymagata, S.
PDB entry 2zy9: Improved crystal structure of magnesium transporter MgtE
Classification: MEMBRANE PROTEIN, METAL TRANSPORT
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.94 Å
Deposited: 2009-01-19
Authors: Nureki, O., Ishitani, R., Hattori, M.
PDB entry 2zya: Dimeric 6-phosphogluconate dehydrogenase complexed with 6-phosphogluconate
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-01-19
Authors: Chen, Y.-Y., Ko, T.-P., Lo, L.-P., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zyb: Crystal structure of phenylimidazo pyrazin 2 bound to the kinase domain of human LCK, (auto-phosphorylated on TYR394)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2009-01-19
Authors: Tsuji, E.
PDB entry 2zyc: Crystal structure of peptidoglycan hydrolase from Sphingomonas sp. A1
Classification: HYDROLASE
Source organism: Sphingomonas sp. A1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2009-01-19
Authors: Ochiai, A., Mikami, B., Hashimoto, W., Murata, K.
PDB entry 2zyd: Dimeric 6-phosphogluconate dehydrogenase complexed with glucose
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-01-19
Authors: Chen, Y.-Y., Ko, T.-P., Lo, L.-P., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zye: Structure of HIV-1 Protease in Complex with Potent Inhibitor KNI-272 Determined by Neutron Crystallography
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: NEUTRON DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-01-20
Authors: Adachi, M., Ohhara, T., Tamada, T., Okazaki, N., Kuroki, R.
PDB entry 2zyf: Crystal structure of homocitrate synthase from Thermus thermophilus complexed with magnesuim ion and alpha-ketoglutarate
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-01-20
Authors: Okada, T., Tomita, T., Kuzuyama, T., Nishiyama, M.
PDB entry 2zyg: Apo-form of dimeric 6-phosphogluconate dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-01-21
Authors: Chen, Y.-Y., Ko, T.-P., Lo, L.-P., Lin, C.-H., Wang, A.H.-J.
PDB entry 2zyh: mutant A. Fulgidus lipase S136A complexed with fatty acid fragment
Classification: HYDROLASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2009-01-22
Authors: Chen, C.K., Ko, T.P., Guo, R.T., Wang, A.H.
PDB entry 2zyi: A. Fulgidus lipase with fatty acid fragment and calcium
Classification: HYDROLASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-01-22
Authors: Chen, C.K., Ko, T.P., Guo, R.T., Wang, A.H.
PDB entry 2zyj: Crystal structure of LysN, alpha-aminoadipate aminotransferase (complexed with N-(5'-phosphopyridoxyl)-L-glutamate), from Thermus thermophilus HB27
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2009-01-26
Authors: Ouchi, T., Tomita, T., Kuzuyama, T., Nishiyama, M.
PDB entry 2zyk: Crystal structure of cyclo/maltodextrin-binding protein complexed with gamma-cyclodextrin
Classification: SUGAR BINDING PROTEIN
Source organism: Thermoactinomyces vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-01-26
Authors: Tonozuka, T., Sogawa, A., Yamada, M., Matsumoto, N., Yoshida, H., Kamitori, S., Ichikawa, K., Mizuno, M., Nishikawa, A., Sakano, Y.
PDB entry 2zyl: Crystal structure of 3-ketosteroid-9-alpha-hydroxylase (KshA) from M. tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-01-27
Authors: D'Angelo, I., Capyk, J., Strynadka, N., Eltis, L.
PDB entry 2zym: Crystal structure of cyclo/maltodextrin-binding protein complexed with alpha-cyclodextrin
Classification: SUGAR BINDING PROTEIN
Source organism: Thermoactinomyces vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-01-27
Authors: Matsumoto, M., Yamada, M., Kurakata, Y., Yoshida, H., Kamitori, S., Nishikawa, A., Tonozuka, T.
PDB entry 2zyn: Crystal structure of cyclo/maltodextrin-binding protein complexed with beta-cyclodextrin
Classification: SUGAR BINDING PROTEIN
Source organism: Thermoactinomyces vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-01-27
Authors: Matsumoto, M., Yamada, M., Kurakata, Y., Yoshida, H., Kamitori, S., Nishikawa, A., Tonozuka, T.
PDB entry 2zyo: Crystal structure of cyclo/maltodextrin-binding protein complexed with maltotetraose
Classification: SUGAR BINDING PROTEIN
Source organism: Thermoactinomyces vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-01-27
Authors: Matsumoto, M., Yamada, M., Kurakata, Y., Yoshida, H., Kamitori, S., Nishikawa, A., Tonozuka, T.
PDB entry 2zyp: X-ray structure of hen egg-white lysozyme with poly(allyl amine)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2009-01-27
Authors: Ito, L., Tomita, S., Yamaguchi, H., Shiraki, K.
PDB entry 2zyq: Crystal structure of the HsaC extradiol dioxygenase from M. tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-01-28
Authors: D'Angelo, I., Yam, K.C., Eltis, L.D., Strynadka, N.
PDB entry 2zyr: A. Fulgidus lipase with fatty acid fragment and magnesium
Classification: HYDROLASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2009-01-28
Authors: Chen, C.K., Ko, T.P., Guo, R.T., Wang, A.H.
PDB entry 2zys: A. Fulgidus lipase with fatty acid fragment and chloride
Classification: HYDROLASE
Source organism: Archaeoglobus fulgidus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-01-29
Authors: Chen, C.K., Ko, T.P., Guo, R.T., Wang, A.H.
PDB entry 2zyt: Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-01-29
Authors: Teramoto, T., Sakakibara, Y., Liu, M.-C., Suiko, M., Kimura, M., Kakuta, Y.
PDB entry 2zyu: Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS and p-nitrophenyl sulfate
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-01-29
Authors: Teramoto, T., Sakakibara, Y., Liu, M.-C., Suiko, M., Kimura, M., Kakuta, Y.
PDB entry 2zyv: Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS/PAP and p-nitrophenol
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2009-01-29
Authors: Teramoto, T., Sakakibara, Y., Liu, M.-C., Suiko, M., Kimura, M., Kakuta, Y.
PDB entry 2zyw: crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and p-nitrophenol, obtained by two-step soaking method
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-01-29
Authors: Teramoto, T., Sakakibara, Y., Liu, M.-C., Suiko, M., Kimura, M., Kakuta, Y.
PDB entry 2zyz: Pyrobaculum aerophilum splicing endonuclease
Classification: SPLICING
Source organism: Pyrobaculum aerophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-01-30
Authors: Yoshinari, S., Inaoka, D.K., Watanabe, Y., Shiba, T., Kurisu, G., Harada, S.
PDB entry 2zz0: Crystal structure of human thioredoxin reductase I (SeCys 498 Cys)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-02-02
Authors: Lo, Y.C., Ko, T.P., Wang, A.H.J.
PDB entry 2zz1: Snapshot of the reaction from 6-CN-UMP to BMP catalyzed by Orotidine Monophosphate Deacarboxylase from M. thermoautotrophicum
Classification: LYASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.57 Å
Deposited: 2009-02-05
Authors: Fujihashi, M., Pai, E.F.
PDB entry 2zz2: Orotidine Monophosphate Decarboxylase K72A mutant from M. thermoautotrophicum complexed with 6-cyano-UMP
Classification: LYASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2009-02-05
Authors: Fujihashi, M., Pai, E.F.
PDB entry 2zz3: Covalent complex of orotidine monophosphate decarboxylase D70A mutant from M. thermoautotrophicus with 6-cyano-UMP
Classification: LYASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-05
Authors: Fujihashi, M., Pai, E.F.
PDB entry 2zz4: Covalent complex of orotidine monophosphate decarboxylase D75N mutant from M. thermoautotrophicum with 6-cyano-UMP
Classification: LYASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2009-02-05
Authors: Fujihashi, M., Pai, E.F.
PDB entry 2zz5: Orotidine Monophosphate Deacarboxylase D70A/K72A double mutant from M. thermoautotrophicum complexed with 6- cyano-UMP
Classification: LYASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2009-02-05
Authors: Fujihashi, M., Pai, E.F.
PDB entry 2zz6: Covalent complex of orotidine monophosphate decarboxylase from M. thermoautotrophicum with 6-azido-UMP
Classification: LYASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2009-02-05
Authors: Fujihashi, M., Pai, E.F.
PDB entry 2zz7: Orotidine Monophosphate Decarboxylase K72A mutant complexed with BMP (produced from 6-Iodo-UMP)
Classification: LYASE
Source organism: Methanothermobacter thermautotrophicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2009-02-05
Authors: Fujihashi, M., Pai, E.F.
PDB entry 2zz8: Crystal structure of LipL32, the most abundant surface protein of pathogenic leptospira spp
Classification: UNKNOWN FUNCTION
Source organism: Leptospira interrogans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2009-02-06
Authors: Vivian, J.P., Beddoe, T., Rossjohn, J.
PDB entry 2zz9: Structure of aquaporin-4 S180D mutant at 2.8 A resolution by electron crystallography
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON CRYSTALLOGRAPHY
Resolution: 2.8 Å
Deposited: 2009-02-06
Authors: Tani, K., Mitsuma, T., Hiroaki, Y., Kamegawa, A., Nishikawa, K., Tanimura, Y., Fujiyoshi, Y.
PDB entry 2zza: Moritella profunda Dihydrofolate reductase complex with NADP+ and Folate
Classification: OXIDOREDUCTASE
Source organism: Moritella profunda
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-02-06
Authors: Hata, K., Tanaka, T., Murakami, C., Ohmae, E., Gekko, K., Shiro, Y., Akasaka, K.
PDB entry 2zzb: Crystal structure of human thioredoxin reductase I and terpyridine platinum(II)
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-02-09
Authors: Lo, Y.C., Ko, T.P., Wang, A.H.J.
PDB entry 2zzc: Crystal structure of NADP(H):human thioredoxin reductase I
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-02-09
Authors: Lo, Y.C., Ko, T.P., Wang, A.H.J.
PDB entry 2zzd: Recombinant thiocyanate hydrolase, air-oxidized form of holo-enzyme
Classification: HYDROLASE
Source organism: Thiobacillus thioparus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2009-02-09
Authors: Arakawa, T., Kawano, Y., Katayama, Y., Yohda, M., Odaka, M.
PDB entry 2zze: Crystal structure of alanyl-tRNA synthetase without oligomerization domain in lysine-methylated form
Classification: LIGASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2009-02-10
Authors: Sokabe, M., Ose, T., Tokunaga, K., Nakamura, A., Nureki, O., Yao, M., Tanaka, I.
PDB entry 2zzf: Crystal structure of alanyl-tRNA synthetase without oligomerization domain
Classification: LIGASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-02-10
Authors: Sokabe, M., Ose, T., Tokunaga, K., Nakamura, A., Nureki, O., Yao, M., Tanaka, I.
PDB entry 2zzg: Crystal structure of alanyl-tRNA synthetase in complex with 5''-O-(N-(L-alanyl)-sulfamyoxyl) adenine without oligomerization domain
Classification: LIGASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-02-10
Authors: Sokabe, M., Ose, T., Tokunaga, K., Nakamura, A., Nureki, O., Yao, M., Tanaka, I.
PDB entry 2zzi: Crystal structure of TTHA1623 in a di-iron-bound form
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-02-16
Authors: Yamamura, A., Okada, A., Kameda, Y., Ohtsuka, J., Nakagawa, N., Ebihara, A., Yokoyama, S., Kuramitsu, S., Nagata, K., Tanokura, M.
PDB entry 2zzj: Crystal structure of endo-beta-1,4-glucuronan lyase from fungus Trichoderma reesei
Classification: LYASE
Source organism: Trichoderma reesei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-16
Authors: Konno, N., Ishida, T., Fushinobu, S., Igarashi, K., Habu, N., Samejima, M., Isogai, A.
PDB entry 2zzk: Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.706 Å
Deposited: 2009-02-17
Authors: Suzuki, Y., Noma, A., Suzuki, T., Ishitani, R., Nureki, O.
PDB entry 2zzl: Structure of bacteriorhodopsin's M intermediate at pH 7
Classification: PROTON TRANSPORT
Source organism: Halobacterium salinarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2009-02-18
Authors: Yamamoto, M., Kouyama, T.
PDB entry 2zzm: The complex structure of aTrm5 and tRNALeu
Classification: TRANSFERASE/RNA
Source organism: Methanocaldococcus jannaschii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2009-02-19
Authors: Goto-Ito, S., Ito, T., Yokoyama, S.
PDB entry 2zzn: The complex structure of aTrm5 and tRNACys
Classification: TRANSFERASE/RNA
Source organism: Methanocaldococcus jannaschii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2009-02-19
Authors: Goto-Ito, S., Ito, T., Yokoyama, S.
PDB entry 2zzo: Crystal structure of the complex between GP41 fragment N36 and fusion inhibitor C34/S138A
Classification: VIRAL PROTEIN/INHIBITOR
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-02-20
Authors: Watabe, T., Nakano, H., Nakatsu, T., Kato, H., Fujii, N.
PDB entry 2zzp: The crystal structure of human Atg4B(C74S)- LC3(1-124) complex
Classification: HYDROLASE/STRUCTURAL PROTEIN
Source organism: Homo sapiens; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-02-22
Authors: Satoo, K., Noda, N.N., Inagaki, F.
PDB entry 2zzq: Crystal structure analysis of the HEV capsid protein, PORF2
Classification: VIRUS
Source organism: Hepatitis E virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.81 Å
Deposited: 2009-02-23
Authors: Miyazaki, N., Xing, L., Wang, C.-Y., Li, T.-C., Takeda, N., Higashiura, A., Nakagawa, A., Tsukihara, T., Miyamura, T., Cheng, R.H.
PDB entry 2zzr: Crystal structure of unsaturated glucuronyl hydrolase from Streptcoccus agalactiae
Classification: HYDROLASE
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-02-24
Authors: Maruyama, Y.
PDB entry 2zzs: Crystal structure of cytochrome c554 from Vibrio parahaemolyticus strain RIMD2210633
Classification: ELECTRON TRANSPORT
Source organism: Vibrio parahaemolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-02-24
Authors: Akazaki, H., Kawai, F., Kumaki, Y., Sekine, K., Hakamata, W., Nishio, T., Park, S.-Y., Oku, T.
PDB entry 2zzt: Crystal structure of the cytosolic domain of the cation diffusion facilitator family protein
Classification: TRANSPORT PROTEIN
Source organism: Thermotoga maritima
Experimental method: X-RAY DIFFRACTION
Resolution: 2.842 Å
Deposited: 2009-02-25
Authors: Higuchi, T., Hattori, M., Tanaka, Y., Ishitani, R., Nureki, O.
PDB entry 2zzu: Human Factor VIIA-Tissue Factor Complexed with ethylsulfonamide-D-5-(3-carboxybenzyloxy)-Trp-Gln-p-aminobenzamidine
Classification: HYDROLASE/BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-02-25
Authors: Kadono, S., Sakamoto, A., Kikuchi, Y., Oh-Eda, M., Yabuta, N., Koga, T., Hattori, K., Shiraishi, T., Haramura, M., Sato, H., Ohta, M., Kozono, T.
PDB entry 2zzv: Crystal Structure of a Periplasmic Substrate Binding Protein in Complex with Calcium and Lactate
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-02-27
Authors: Akiyama, N., Takeda, K., Miki, K.
PDB entry 2zzw: Crystal Structure of a Periplasmic Substrate Binding Protein in Complex with Zinc and Lactate
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-02-27
Authors: Akiyama, N., Takeda, K., Miki, K.
PDB entry 2zzx: Crystal Structure of a Periplasmic Substrate Binding Protein in Complex with Lactate
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-02-27
Authors: Akiyama, N., Takeda, K., Miki, K.
PDB entry 300d: CAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MN(II)-SOAKED
Classification: RIBOZYME
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 1996-12-14
Authors: Scott, W.G., Murray, J.B., Arnold, J.R.P., Stoddard, B.L., Klug, A.
PDB entry 301d: CAPTURING THE STRUCTURE OF A CATALYTIC RNA INTERMEDIATE: RNA HAMMERHEAD RIBOZYME, MG(II)-SOAKED
Classification: RIBOZYME
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 1996-12-14
Authors: Scott, W.G., Murray, J.B., Arnold, J.R.P., Stoddard, B.L., Klug, A.
PDB entry 302d: META-HYDROXY ANALOGUE OF HOECHST 33258 ('HYDROXYL IN' CONFORMATION) BOUND TO D(CGCGAATTCGCG)2
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1996-06-26
Authors: Clark, G.R., Squire, C.J., Gray, E.J., Leupin, W., Neidle, S.
PDB entry 303d: META-HYDROXY ANALOGUE OF HOECHST 33258 ('HYDROXYL OUT' CONFORMATION) BOUND TO D(CGCGAATTCGCG)2
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1996-06-26
Authors: Clark, G.R., Squire, C.J., Gray, E.J., Leupin, W., Neidle, S.
PDB entry 304d: SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE MONOCLINIC FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1997-01-03
Authors: Chen, X., Ramakrishnan, B., Sundaralingam, M.
PDB entry 305d: SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICATATIC) IN THE TETRAGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 1997-01-03
Authors: Chen, X., Ramakrishnan, B., Sundaralingam, M.
PDB entry 306d: SIDE-BY-SIDE BINDING OF DISTAMYCIN MOLECULES TO D(ICITACIC)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 1997-01-03
Authors: Chen, X., Ramakrishnan, B., Sundaralingam, M.
PDB entry 307d: Structure of a DNA analog of the primer for HIV-1 RT second strand synthesis
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 1997-01-07
Authors: Han, G.W., Kopka, M.L., Cascio, D., Grzeskowiak, K., Dickerson, R.E.
PDB entry 308d: BINDING OF DAUNOMYCIN TO B-D-GLUCOSYLATED DNA FOUND IN PROTOZOA TRYPANOSOMA BRUCEI STUDIED BY X-RAY CRYSTALLOGRAPH
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 1997-01-15
Authors: Gao, Y.-G., Robinson, H., Wijsman, E.R., Van Der Marel, G.A., Van Boom, J.H., Wang, A.H.-J.
PDB entry 309d: A DNA DECAMER WITH A STICKY END: THE CRYSTAL STRUCTURE OF D-CGACGATCGT
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 1997-01-07
Authors: Qiu, H.X., Dewan, J.C., Seeman, N.C.
PDB entry 310d: Crystal structure of 2'-O-Me(CGCGCG)2: an RNA duplex at 1.3 A resolution. Hydration pattern of 2'-O-methylated RNA
Classification: RNA
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 1996-05-25
Authors: Adamiak, D.A., Milecki, J., Adamiak, R.W., Dauter, Z., Rypniewski, W.R.
PDB entry 311d: THE ROLE OF HYDROGEN BONDING IN MINOR-GROOVE DRUG-DNA RECOGNITION. STRUCTURE OF A BIS-AMIDINIUM DERIVATIVE OF HOECHST 33258 COMPLEXED TO THE DODECANUCLEOTIDE D(CGCGAATTCGCG)2
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1997-02-04
Authors: Clark, G.R., Boykin, D.W., Czarny, A., Neidle, S.
PDB entry 312d: Z-DNA HEXAMER WITH 5' OVERHANGS THAT FORM A REVERSE WATSON-CRICK BASE PAIR
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1997-02-04
Authors: Mooers, B.H.M., Eichman, B.F., Ho, P.S.
PDB entry 313d: Z-DNA HEXAMER WITH 5' OVERHANGS THAT FORM A REVERSE HOOGSTEEN BASE PAIR
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 1997-02-04
Authors: Mooers, B.H.M., Eichman, B.F., Ho, P.S.
PDB entry 314d: Z-DNA HEXAMER WITH 5' OVERHANGS THAT FORM A REVERSE WOBBLE BASE PAIR
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1997-02-04
Authors: Mooers, B.H.M., Eichman, B.F., Ho, P.S.
PDB entry 315d: CRYSTAL STRUCTURE OF AN ALTERNATING OCTAMER R(GUAUGUA)D(C) WITH ADJACENT G-U WOBBLE PAIRS
Classification: DNA-RNA HYBRID
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 1997-02-26
Authors: Biswas, R., Wahl, M.C., Ban, C., Sundaralingam, M.
PDB entry 316d: Selectivity of F8-actinomycin D for RNA:DNA hybrids and its anti-leukemia activity
Classification: DNA/ANTIBIOTIC
Source organism: STREPTOMYCES ANTIBIOTICUS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 1997-03-05
Authors: Takusagawa, F., Takusagawa, K.T., Carlson, R.G., Weaver, R.F.
PDB entry 317d: STRUCTURE OF D(CCTAGGG): COMPARISON WITH NINE ISOMORPHOUS OCTAMER SEQUENCES REVEALS FOUR DISTINCT PATTERNS OF SEQUENCE-DEPENDENT INTERMOLECULAR INTERACTIONS
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 318d: CRYSTAL STRUCTURES OF D(CCGGGCC(BR)5CGG)-HEXAGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 319d: CRYSTAL STRUCTURES OF D(CCGGG(BR)5CCCGG)-ORTHOGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 31bi: INTERLEUKIN-1 BETA (IL-1 BETA) (MUTANT WITH CYS 71 REPLACED BY SER) (C71S)
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 1991-03-21
Authors: Veerapandian, B., Poulos, T.L., Gilliland, G.L., Masui, Y., Hirai, Y.
PDB entry 320d: CRYSTAL STRUCTURES OF D(CCGGGCCCGG)-ORTHOGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 321d: CRYSTAL STRUCTURES OF D(CCGGGCCCGG)-ORTHOGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 322d: CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-HEXAGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 323d: CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-ORTHOGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 324d: CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-ORTHOGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 325d: CRYSTAL STRUCTURES OF D(CM5CGGGCCM5CGG)-HEXAGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 326d: CRYSTAL STRUCTURES OF D(CM5CGGGCCM5CGG)-ORTHOGONAL FORM
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Sundaralingam, M.
PDB entry 327d: CRYSTAL STRUCTURES OF D(GM5CGM5CGCGCGC)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 1997-03-17
Authors: Tippin, D.B., Ramakrishnan, B., Sundaralingam, M.
PDB entry 328d: STRUCTURE OF A D(CGCGAATTCGCG)2-SN7167 COMPLEX
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 1997-04-15
Authors: Squire, C.J., Clark, G.R., Denny, W.A.
PDB entry 329d: EFFECT OF CYTOSINE METHYLATION ON DNA-DNA RECOGNITION AT CPG STEPS
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 1997-04-29
Authors: Mayer-Jung, C., Moras, D., Timsit, Y.
PDB entry 32c2: STRUCTURE OF AN ACTIVITY SUPPRESSING FAB FRAGMENT TO CYTOCHROME P450 AROMATASE
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 1999-04-21
Authors: Sawicki, M.W., Ng, P.C., Burkhart, B., Pletnev, V., Higashiyama, T., Osawa, Y., Ghosh, D.
PDB entry 330d: BASE-PAIRING SHIFT IN THE MAJOR GROOVE OF (CA)N TRACTS BY B-DNA CRYSTAL STRUCTURES
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 1997-04-29
Authors: Timsit, Y., Vilbois, E., Moras, D.
PDB entry 331d: CRYSTAL STRUCTURE OF D(GCGCGCG) WITH 5'-OVERHANG G'S
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 1997-05-13
Authors: Pan, B., Ban, C., Wahl, M., Sundaralingam, M.