LiteFold/PDB huggingface dataset:
PDB entry 2zm5: Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)
Classification: TRANSFERASE/RNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-04-11
Authors: Sakai, J., Yao, M., Chimnaronk, S., Tanaka, I.
PDB entry 2zm6: Crystal structure of the Thermus thermophilus 30S ribosomal subunit
Classification: RIBOSOME
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-04-11
Authors: Kaminishi, T., Wang, H., Kawazoe, M., Ishii, R., Schluenzen, F., Hanawa-Suetsugu, K., Wilson, D.N., Nomura, M., Takemoto, C., Shirouzu, M., Fucini, P., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zm7: Structure of 6-Aminohexanoate-dimer Hydrolase, S112A/G181D Mutant Complexed with 6-Aminohexanoate-dimer
Classification: HYDROLASE
Source organism: Flavobacterium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-04-14
Authors: Ohki, T., Shibata, N., Higuchi, Y., Kawashima, Y., Takeo, M., Kato, D., Negoro, S.
PDB entry 2zm8: Structure of 6-Aminohexanoate-dimer Hydrolase, S112A/D370Y Mutant Complexed with 6-Aminohexanoate-dimer
Classification: HYDROLASE
Source organism: Flavobacterium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-04-14
Authors: Ohki, T., Shibata, N., Higuchi, Y., Kawashima, Y., Takeo, M., Kato, D., Negoro, S.
PDB entry 2zm9: Structure of 6-Aminohexanoate-dimer Hydrolase, A61V/S112A/A124V/R187S/F264C/G291R/G338A/D370Y mutant (Hyb-S4M94) with Substrate
Classification: HYDROLASE
Source organism: Flavobacterium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-04-14
Authors: Ohki, T., Shibata, N., Higuchi, Y., Kawashima, Y., Takeo, M., Kato, D., Negoro, S.
PDB entry 2zma: Crystal Structure of 6-Aminohexanoate-dimer Hydrolase S112A/G181D/H266N/D370Y Mutant with Substrate
Classification: HYDROLASE
Source organism: Flavobacterium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2008-04-14
Authors: Ohki, T., Shibata, N., Higuchi, Y., Takeo, M., Negoro, S.
PDB entry 2zmb: Crystal structure of the complex of C-terminal lobe of bovine lactoferrin with parecoxib at 2.9 A resolution
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-04-15
Authors: Jain, R., Mir, R., Sinha, M., Singh, N., Kaur, P., Sharma, S., Singh, T.P.
PDB entry 2zmc: Crystal structure of human mitotic checkpoint kinase Mps1 catalytic domain apo form
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.14 Å
Deposited: 2008-04-16
Authors: Chu, M.L.H., Chavas, L.M.G., Douglas, K.T., Eyers, P.A., Tabernero, L.
PDB entry 2zmd: Crystal structure of human Mps1 catalytic domain T686A mutant in complex with SP600125 inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2008-04-16
Authors: Chu, M.L.H., Chavas, L.M.G., Douglas, K.T., Eyers, P.A., Tabernero, L.
PDB entry 2zme: Integrated structural and functional model of the human ESCRT-II complex
Classification: PROTEIN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-04-17
Authors: Im, Y.J., Hurley, J.H.
PDB entry 2zmf: Crystal structure of the C-terminal GAF domain of human phosphodiesterase 10A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-04-17
Authors: Handa, N., Kishishita, S., Mizohata, E., Omori, K., Kotera, J., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zmh: Crystal Structure of Rat Vitamin D Receptor Bound to Adamantyl Vitamin D Analogs: Structural Basis for Vitamin D Receptor Antagonism and/or Partial Agonism
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-04-18
Authors: Nakabayashi, M., Yamada, S., Tanaka, T., Igarashi, M., Yoshimoto, N., Ikura, T., Ito, N., Makishima, M., Tokiwa, H., DeLuca, H.F., Shimizu, M.
PDB entry 2zmi: Crystal Structure of Rat Vitamin D Receptor Bound to Adamantyl Vitamin D Analogs: Structural Basis for Vitamin D Receptor Antagonism and/or Partial Agonism
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-04-19
Authors: Nakabayashi, M., Yamada, S., Tanaka, T., Igarashi, M., Yoshimoto, N., Ikura, T., Ito, N., Makishima, M., Tokiwa, H., DeLuca, H.F., Shimizu, M.
PDB entry 2zmj: Crystal Structure of Rat Vitamin D Receptor Bound to Adamantyl Vitamin D Analogs: Structural Basis for Vitamin D Receptor Antagonism and/or Partial Agonism
Classification: TRANSCRIPTION
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-04-19
Authors: Nakabayashi, M., Yamada, S., Tanaka, T., Igarashi, M., Yoshimoto, N., Ikura, T., Ito, N., Makishima, M., Tokiwa, H., DeLuca, H.F., Shimizu, M.
PDB entry 2zmk: Crystl structure of Basic Winged bean lectin in complex with Gal-alpha-1,4-Gal-Beta-Ethylene
Classification: SUGAR BINDING PROTEIN
Source organism: Psophocarpus tetragonolobus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-04-19
Authors: Kulkarni, K.A., Katiyar, S., Surolia, A., Vijayan, M.
PDB entry 2zml: Crystal structure of basic winged bean lectin in complex with Gal-ALPHA 1,4 Gal
Classification: SUGAR BINDING PROTEIN
Source organism: Psophocarpus tetragonolobus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-04-19
Authors: Kulkarni, K.A., Katiyar, S., Surolia, A., Vijayan, M., Suguna, K.
PDB entry 2zmm: Crystal structure of PTP1B-inhibitor complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-04-19
Authors: Xu, W., Wu, J.
PDB entry 2zmn: Crystal Structure of basic winged bean lectin in complex with Gal-alpha- 1,6 Glc
Classification: SUGAR BINDING PROTEIN
Source organism: Psophocarpus tetragonolobus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-04-19
Authors: Kulkarni, K.A., Katiyar, S., Surolia, A., Vijayan, M., Suguna, K.
PDB entry 2zmu: Crystal Structure of Monomeric Kusabira-Orange (MKO), Orange-Emitting GFP-like Protein, at pH 9.1
Classification: LUMINESCENT PROTEIN
Source organism: Fungia concinna
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2008-04-21
Authors: Kikuchi, A., Fukumura, E., Karasawa, S., Mizuno, H., Miyawaki, A., Shiro, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zmv: Crystal structure of Synbindin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-04-21
Authors: Fan, F.
PDB entry 2zmw: Crystal Structure of Monomeric Kusabira-Orange (MKO), Orange-Emitting GFP-like Protein, at pH 6.0
Classification: LUMINESCENT PROTEIN
Source organism: Fungia concinna
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-04-21
Authors: Kikuchi, A., Fukumura, E., Karasawa, S., Mizuno, H., Miyawaki, A., Shiro, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zmx: Crystal structure of the met1-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus obtained by soaking in cupric sulfate solution for 36 hours
Classification: OXIDOREDUCTASE/METAL TRANSPORT
Source organism: Streptomyces castaneoglobisporus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2008-04-21
Authors: Matoba, Y., Sugiyama, M.
PDB entry 2zmy: Crystal structure of the met2-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus obtained by soaking in cupric sulfate solution for 80 hours
Classification: OXIDOREDUCTASE/METAL TRANSPORT
Source organism: STREPTOMYCES CASTANEOGLOBISPORUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-04-21
Authors: Matoba, Y., Sugiyama, M.
PDB entry 2zmz: The 1.37-A crystal structure of the hydroxylamine-induced deoxy-form of the copper-bound tyrosinase in complex with a caddie protein from Streptomyces castaneoglobisporus
Classification: OXIDOREDUCTASE/METAL TRANSPORT
Source organism: STREPTOMYCES CASTANEOGLOBISPORUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2008-04-21
Authors: Matoba, Y., Sugiyama, M.
PDB entry 2zn7: CRYSTAL STRUCTURES OF PTP1B-Inhibitor Complexes
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-04-22
Authors: Xu, W., Wu, J.
PDB entry 2zn8: Crystal structure of Zn2+-bound form of ALG-2
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-04-22
Authors: Suzuki, H., Kawasaki, M., Inuzuka, T., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
PDB entry 2zn9: Crystal structure of Ca2+-bound form of des3-20ALG-2
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-04-22
Authors: Suzuki, H., Kawasaki, M., Inuzuka, T., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
PDB entry 2znb: METALLO-BETA-LACTAMASE (CADMIUM-BOUND FORM)
Classification: HYDROLASE
Source organism: Bacteroides fragilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 1997-10-14
Authors: Concha, N.O., Herzberg, O.
PDB entry 2znc: MURINE CARBONIC ANHYDRASE IV
Classification: LYASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 1998-02-10
Authors: Stams, T., Chen, Y., Christianson, D.W.
PDB entry 2znd: Crystal structure of Ca2+-free form of des3-20ALG-2
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-04-22
Authors: Suzuki, H., Kawasaki, M., Inuzuka, T., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
PDB entry 2zne: Crystal structure of Zn2+-bound form of des3-23ALG-2 complexed with Alix ABS peptide
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-04-22
Authors: Suzuki, H., Kawasaki, M., Inuzuka, T., Kakiuchi, T., Shibata, H., Wakatsuki, S., Maki, M.
PDB entry 2znf: HIGH-RESOLUTION STRUCTURE OF AN HIV ZINC FINGERLIKE DOMAIN VIA A NEW NMR-BASED DISTANCE GEOMETRY APPROACH
Classification: VIRAL PROTEIN
Source organism: Human immunodeficiency virus 1
Experimental method: SOLUTION NMR
Deposited: 1990-03-30
Authors: Summers, M.F., South, T.L., Kim, B., Hare, D.R.
PDB entry 2znh: Crystal Structure of a Domain-Swapped Serpin Dimer
Classification: BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-04-25
Authors: Yamasaki, M., Huntington, J.A.
PDB entry 2zni: Crystal structure of Pyrrolysyl-tRNA synthetase-tRNA(Pyl) complex from Desulfitobacterium hafniense
Classification: LIGASE/RNA
Source organism: Desulfitobacterium hafniense; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-04-25
Authors: Nozawa, K., Araiso, Y., Soll, D., Ishitani, R., Nureki, O.
PDB entry 2znj: Crystal structure of Pyrrolysyl-tRNA synthetase from Desulfitobacterium hafniense
Classification: LIGASE
Source organism: Desulfitobacterium hafniense
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-04-25
Authors: Nozawa, K., Araiso, Y., Soll, D., Ishitani, R., Nureki, O.
PDB entry 2znk: Thrombin Inhibition
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-04-26
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2znl: Crystal structure of PA-PB1 complex form influenza virus RNA polymerase
Classification: TRANSCRIPTION
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-04-28
Authors: Obayashi, E., Yoshida, H., Kawai, F., Shibayama, N., Kawaguchi, A., Nagata, K., Tame, J.R.H., Park, S.-Y.
PDB entry 2znm: Oxidoreductase NmDsbA3 from Neisseria meningitidis
Classification: OXIDOREDUCTASE
Source organism: Neisseria meningitidis serogroup B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-04-30
Authors: Vivian, J.P., Scoullar, J., Robertson, A.L., Bottomley, S.P., Horne, J., Chin, Y., Velkov, T., Wielens, J., Thompson, P.E., Piek, S., Byres, E., Beddoe, T., Wilce, M.C.J., Kahler, C., Rossjohn, J., Scanlon, M.J.
PDB entry 2znn: Human PPAR alpha ligand binding domain in complex with a synthetic agonist TIPP703
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2008-04-30
Authors: Oyama, T., Toyota, K., Kasuga, J., Miyachi, H., Morikawa, K.
PDB entry 2zno: Human PPAR gamma ligand binding domain in complex with a synthetic agonist TIPP703
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-04-30
Authors: Oyama, T., Waku, T., Kasuga, J., Miyachi, H., Morikawa, K.
PDB entry 2znp: Human PPAR delta ligand binding domain in complex with a synthetic agonist TIPP204
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-04-30
Authors: Oyama, T., Hirakawa, Y., Nagasawa, N., Miyachi, H., Morikawa, K.
PDB entry 2znq: Human PPAR delta ligand binding domain in complex with a synthetic agonist TIPP401
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-04-30
Authors: Oyama, T., Hirakawa, Y., Nagasawa, N., Miyachi, H., Morikawa, K.
PDB entry 2znr: Crystal structure of the DUB domain of human AMSH-LP
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2008-05-01
Authors: Sato, Y., Azusa, Y., Yamagata, A., Mimura, H., Wang, X., Yamashita, M., Ookata, K., Nureki, O., Iwai, K., Komada, M., Fukai, S.
PDB entry 2zns: Crystal structure of the ligand-binding core of the human ionotropic glutamate receptor, GluR5, in complex with glutamate
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-01
Authors: Unno, M., Sasaki, M., Ikeda-Saito, M.
PDB entry 2znt: Crystal structure of the ligand-binding core of the human ionotropic glutamate receptor, GluR5, in complex with a novel selective agonist, dysiherbaine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-01
Authors: Unno, M., Sasaki, M., Ikeda-Saito, M.
PDB entry 2znu: Crystal structure of the ligand-binding core of the human ionotropic glutamate receptor, GluR5, in complex with a novel selective agonist, neodysiherbaine A
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-05-01
Authors: Unno, M., Sasaki, M., Ikeda-Saito, M.
PDB entry 2znv: Crystal structure of human AMSH-LP DUB domain in complex with Lys63-linked ubiquitin dimer
Classification: HYDROLASE/Signaling Protein
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-05-01
Authors: Sato, Y., Azusa, Y., Yamagata, A., Mimura, H., Wang, X., Yamashita, M., Ookata, K., Nureki, O., Iwai, K., Komada, M., Fukai, S.
PDB entry 2znw: Crystal Structure of ScFv10 in Complex with Hen Egg Lysozyme
Classification: IMMUNE SYSTEM/HYDROLASE
Source organism: Gallus gallus; Mus musculus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2008-05-02
Authors: DeSantis, M.E., Acchione, M., Li, M., Walter, R.L., Wlodawer, A., Smith-Gill, S.
PDB entry 2znx: 5-Fluorotryptophan Incorporated ScFv10 Complexed to Hen Egg Lysozyme
Classification: IMMUNE SYSTEM/HYDROLASE
Source organism: Gallus gallus; Mus musculus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-02
Authors: DeSantis, M.E., Acchione, M., Li, M., Walter, R.L., Wlodawer, A., Smith-Gill, S.
PDB entry 2zny: Crystal structure of the FFRP
Classification: DNA BINDING PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2008-05-02
Authors: Yamada, M., Suzuki, M.
PDB entry 2znz: Crystal structure of FFRP
Classification: DNA BINDING PROTEIN
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2008-05-02
Authors: Yamada, M., Suzuki, M.
PDB entry 2zo0: mouse NP95 SRA domain DNA specific complex 1
Classification: LIGASE/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2008-05-05
Authors: Hashimoto, H., Horton, J.R., Cheng, X.
PDB entry 2zo1: Mouse NP95 SRA domain DNA specific complex 2
Classification: LIGASE/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2008-05-05
Authors: Hashimoto, H., Horton, J.R., Cheng, X.
PDB entry 2zo2: Mouse NP95 SRA domain non-specific DNA complex
Classification: LIGASE/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.09 Å
Deposited: 2008-05-05
Authors: Hashimoto, H., Horton, J.R., Cheng, X.
PDB entry 2zo3: Bisphenylic Thrombin Inhibitors
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-05
Authors: Baum, B., Heine, A., Klebe, G.
PDB entry 2zo4: Crystal structure of metallo-beta-lactamase family protein TTHA1429 from Thermus thermophilus HB8
Classification: HYDROLASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-05
Authors: Yamamura, A., Nagata, K., Agari, Y., Ebihara, A., Nakagawa, N., Yokoyama, S., Kuramitsu, S., Tanokura, M.
PDB entry 2zo5: Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with azide
Classification: OXIDOREDUCTASE
Source organism: Thioalkalivibrio nitratireducens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-05
Authors: Polyakov, K.M., Boyko, K.M., Slutsky, A., Tikhonova, T.V., Antipov, A.N., Zvyagilskaya, R.A., Popov, A.N., Lamzin, V.S., Bourenkov, G.P., Popov, V.O.
PDB entry 2zo6: Crystal Structure of Kusabira-Cyan (KCY), a Cyan-Emitting GFP-Like Protein
Classification: LUMINESCENT PROTEIN
Source organism: Fungia concinna
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-05-06
Authors: Kikuchi, A., Fukumura, E., Karasawa, S., Miyawaki, A., Shiro, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zo7: Crystal Structure of a Kusabira-Cyan Mutant (KCY-R1), a Cyan/Green-Emitting GFP-Like Protein
Classification: LUMINESCENT PROTEIN
Source organism: Fungia concinna
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2008-05-06
Authors: Kikuchi, A., Fukumura, E., Karasawa, S., Miyawaki, A., Shiro, Y., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zo9: Malonate-bound structure of the glycerophosphodiesterase from Enterobacter aerogenes (GpdQ) and characterization of the native Fe2+ metal ion preference
Classification: HYDROLASE
Source organism: Enterobacter aerogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-05-07
Authors: Jackson, C.J., Carr, P.D., Ollis, D.L.
PDB entry 2zoa: Malonate-bound structure of the glycerophosphodiesterase from Enterobacter aerogenes (GpdQ) COLLECTED AT 1.280 ANGSTROM
Classification: HYDROLASE
Source organism: Enterobacter aerogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-05-07
Authors: Ollis, D.L., Jackson, C.J., Carr, P.D.
PDB entry 2zoc: Crystal structure of recombinant human annexin IV
Classification: METAL BINDING PROTEIN, LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-05-08
Authors: Konno, M., Kaneko-Kanzaki, Y., Fushinobu-Okushi, N., Mochizuki, K., Uchikaw, E., Satoh, A., Aikawa, K.
PDB entry 2zod: Crystal structure of selenophosphate synthetase from Aquifex aeolicus
Classification: TRANSFERASE
Source organism: Aquifex aeolicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2008-05-09
Authors: Sekine, S.I., Matsumoto, E., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zoe: HA3 subcomponent of Clostridium botulinum type C progenitor toxin, complex with N-acetylneuramic acid
Classification: TOXIN
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-05-09
Authors: Nakamura, T., Kotani, M., Tonozuka, T., Ide, A., Oguma, K., Nishikawa, A.
PDB entry 2zof: Crystal structure of mouse carnosinase CN2 complexed with MN and bestatin
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-05-14
Authors: Unno, H., Yamashita, T., Okumura, N., Kusunoki, M.
PDB entry 2zog: Crystal structure of mouse carnosinase CN2 complexed with ZN and bestatin
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-14
Authors: Unno, H., Yamashita, T., Okumura, N., Kusunoki, M.
PDB entry 2zoh: X-ray Crystal Structure of Photoactive Yellow Protein, Wild type, at 295K
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2008-05-20
Authors: Yamaguchi, S.
PDB entry 2zoi: Neutron Crystal Structure of Photoactive Yellow Protein, Wild type, at 295K
Classification: SIGNALING PROTEIN
Source organism: Halorhodospira halophila
Experimental method: NEUTRON DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-05-21
Authors: Yamaguchi, S.
PDB entry 2zok: Crystal structure of H-2Db in complex with JHMV epitope S510
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-22
Authors: Theodossis, A., Dunstone, M.A., Rossjohn, J.
PDB entry 2zol: Crystal structure of H-2Db in complex with the W513S variant of JHMV epitope S510
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-05-22
Authors: Theodossis, A., Dunstone, M.A., Rossjohn, J.
PDB entry 2zom: Crystal structure of CutA1 from Oryza sativa
Classification: UNKNOWN FUNCTION
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2008-05-23
Authors: Kezuka, Y., Bagautdinov, B., Katoh, S., Ohtake, Y., Yutani, K., Nonaka, T., Katoh, E.
PDB entry 2zon: Crystal structure of electron transfer complex of nitrite reductase with cytochrome c
Classification: OXIDOREDUCTASE/electron transport
Source organism: Achromobacter xylosoxidans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-05-27
Authors: Nojiri, M., Koteishi, H., Yamaguchi, K., Suzuki, S.
PDB entry 2zoo: Crystal structure of nitrite reductase from Pseudoalteromonas haloplanktis TAC125
Classification: OXIDOREDUCTASE
Source organism: Pseudoalteromonas haloplanktis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-05-27
Authors: Nojiri, M., Tsuda, A., Yamaguchi, K., Suzuki, S.
PDB entry 2zop: X-ray crystal structure of a CRISPR-associated Cmr5 family protein from Thermus thermophilus HB8
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Thermus thermophilus HB8
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-05-28
Authors: Sakamoto, K., Agari, Y., Shinkai, A., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zoq: Structural dissection of human mitogen-activated kinase ERK1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2008-06-01
Authors: Kinoshita, T., Tada, T., Nakae, S., Yoshida, I.
PDB entry 2zos: Crystal structure of mannosyl-3-phosphoglycerate phosphatase from Pyrococcus horikoshii
Classification: HYDROLASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-06-05
Authors: Kawamura, T., Watanabe, N., Tanaka, I.
PDB entry 2zot: Crystal structure of human F-spondin reeler domain (fragment 1)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-06-07
Authors: Nagae, M., Nogi, T., Takagi, J.
PDB entry 2zou: Crystal structure of human F-spondin reeler domain (fragment 2)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-06-07
Authors: Nagae, M., Nogi, T., Takagi, J.
PDB entry 2zov: Structure of the periplasmic domain of MotB from Salmonella (crystal form I)
Classification: MEMBRANE PROTEIN
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-06-09
Authors: Imada, K., Kojima, S., Namba, K., Homma, M.
PDB entry 2zow: Crystal Structure of H2O2 treated Cu,Zn-SOD
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-06-11
Authors: Ito, S., Ishii, T., Sakai, H., Uchida, K.
PDB entry 2zox: Crystal Structure of the Covalent Intermediate of Human Cytosolic beta-Glucosidase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-17
Authors: Noguchi, J., Hayashi, Y., Baba, Y., Okino, N., Kimura, M., Ito, M., Kakuta, Y.
PDB entry 2zoy: The multi-drug binding transcriptional repressor CgmR (CGL2612 protein) from C.glutamicum
Classification: GENE REGULATION
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-20
Authors: Itou, H., Yao, M., Watanabe, N., Tanaka, I.
PDB entry 2zoz: Crystal structure of the ethidium-bound form of the multi-drug binding transcriptional repressor CgmR
Classification: TRANSCRIPTION
Source organism: Corynebacterium glutamicum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-06-20
Authors: Itou, H., Shirakihara, Y., Tanaka, I.
PDB entry 2zp0: Human factor viia-tissue factor complexed with benzylsulfonamide-D-ile-gln-P-aminobenzamidine
Classification: HYDROLASE/BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-06-20
Authors: Kadono, S., Sakamoto, A., Kikuchi, Y., Oh-eda, M., Yabuta, N., Koga, T., Hattori, K., Shiraishi, T., Haramura, M., Kodama, H.
PDB entry 2zp1: Structual basis of iodo-tyrosine recognition by engineered archeal tyrosyl-tRNA synthetase
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-06-22
Authors: Oki, K., Kobayashi, T., Sakamoto, K., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zp2: C-terminal domain of KipI from Bacillus subtilis
Classification: TRANSFERASE INHIBITOR
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2008-06-24
Authors: Langley, D.B., Jacques, D.A.
PDB entry 2zp3: Carboxylic ester hydrolase, single mutant d49n of bovine pancreatic pla2 enzyme
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-27
Authors: Kanaujia, S.P., Sekar, K.
PDB entry 2zp4: Carboxylic ester hydrolase, single mutant h48n of bovine pancreatic pla2 enzyme
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-27
Authors: Kanaujia, S.P., Sekar, K.
PDB entry 2zp5: Carboxylic ester hydrolase, single mutant d49k of bovine pancreatic pla2 enzyme
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-06-27
Authors: Kanaujia, S.P., Sekar, K.
PDB entry 2zp6: Crystal structure of Bovine Insulin (Hexameric form)
Classification: HORMONE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2008-06-27
Authors: Jaimohan, S.M., Naresh, M.D., Mandal, A.B.
PDB entry 2zp7: Crystal structure of LysN, alpha-aminoadipate aminotransferase (Leucine complex), from Thermus thermophilus HB27
Classification: TRANSFERASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2008-06-30
Authors: Tomita, T., Miyazaki, T., Miyagawa, T., Fushinobu, S., Kuzuyama, T., Nishiyama, M.
PDB entry 2zp8: The Nature of the TRAP:Anti-TRAP complex
Classification: RNA BINDING PROTEIN/TRANSCRIPTION
Source organism: Bacillus stearothermophilus; Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-07-08
Authors: Watanabe, M., Heddle, J.G., Unzai, S., Akashi, S., Park, S.Y., Tame, J.R.H.
PDB entry 2zp9: The Nature of the TRAP:Anti-TRAP complex
Classification: RNA BINDING PROTEIN/TRANSCRIPTION
Source organism: Bacillus stearothermophilus; Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-07-08
Authors: Watanabe, M., Heddle, J.G., Unzai, S., Akashi, S., Park, S.Y., Tame, J.R.H.
PDB entry 2zpa: Crystal Structure of tRNA(Met) Cytidine Acetyltransferase
Classification: TRANSFERASE
Source organism: Escherichia coli K12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-07-08
Authors: Chimnaronk, S., Manita, T., Yao, M., Tanaka, I.
PDB entry 2zpb: nitrosylated Fe-type nitrile hydratase
Classification: LYASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2008-07-09
Authors: Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
PDB entry 2zpc: Crystal structure of the R43L mutant of LolA in the closed form
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-07-10
Authors: Takeda, K., Yokota, N., Oguchi, Y., Tokuda, H., Miki, K.
PDB entry 2zpd: Crystal structure of the R43L mutant of LolA in the open form
Classification: PROTEIN TRANSPORT
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-07-10
Authors: Takeda, K., Yokota, N., Oguchi, Y., Tokuda, H., Miki, K.
PDB entry 2zpe: nitrosylated Fe-type nitrile hydratase with tert-butylisonitrile
Classification: LYASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2008-07-10
Authors: Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
PDB entry 2zpf: Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 18min at 293K
Classification: LYASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.482 Å
Deposited: 2008-07-11
Authors: Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
PDB entry 2zpg: Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 120min at 293K
Classification: LYASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2008-07-11
Authors: Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
PDB entry 2zph: Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 340min at 293K
Classification: LYASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2008-07-11
Authors: Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
PDB entry 2zpi: Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 440min at 293K
Classification: LYASE
Source organism: Rhodococcus erythropolis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.491 Å
Deposited: 2008-07-11
Authors: Hashimoto, K., Suzuki, H., Taniguchi, K., Noguchi, T., Yohda, M., Odaka, M.
PDB entry 2zpk: Crystal structure of P20.1 Fab fragment in complex with its antigen peptide
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-07-16
Authors: Nogi, T., Sanagawa, T., Takagi, J.
PDB entry 2zpl: Crystal structure analysis of PDZ domain A
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-17
Authors: Inaba, K., Suzuki, M.
PDB entry 2zpm: Crystal structure analysis of PDZ domain B
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 0.98 Å
Deposited: 2008-07-17
Authors: Inaba, K., Suzuki, M.
PDB entry 2zpn: The crystal structure of Saccharomyces cerevisiae Atg8- Atg19(412-415) complex
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2008-07-17
Authors: Noda, N.N., Inagaki, F.
PDB entry 2zpo: Crystal Structure of Green Turtle Egg White Ribonuclease
Classification: HYDROLASE
Source organism: Chelonia mydas
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-07-25
Authors: Katekaew, S., Kakuta, Y., Torikata, T., Kimura, M., Yoneda, K., Araki, T.
PDB entry 2zpp: Neutron crystal structure of cubic insulin at pD9
Classification: HORMONE
Source organism: Sus scrofa
Experimental method: NEUTRON DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-07-26
Authors: Ishikawa, T., Tanaka, I., Niimura, N.
PDB entry 2zpq: Crystal structure of anionic trypsin isoform 1 from chum salmon
Classification: HYDROLASE
Source organism: Oncorhynchus keta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-07-28
Authors: Iyaguchi, D., Toyota, E.
PDB entry 2zpr: Crystal structure of anionic trypsin isoform 2 from chum salmon
Classification: HYDROLASE
Source organism: Oncorhynchus keta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-07-28
Authors: Iyaguchi, D., Toyota, E.
PDB entry 2zps: Crystal structure of anionic trypsin isoform 3 from chum salmon
Classification: HYDROLASE
Source organism: Oncorhynchus keta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-07-28
Authors: Iyaguchi, D., Toyota, E.
PDB entry 2zpt: Crystal structure of mouse sulfotransferase SULT1D1 complex with PAP
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.15 Å
Deposited: 2008-07-28
Authors: Teramoto, T., Sakakibara, Y., Inada, K., Liu, M.C., Suiko, M., Kimura, M., Kakuta, Y.
PDB entry 2zpu: Crystal Structure of Modified Serine Racemase from S.pombe.
Classification: ISOMERASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-07-29
Authors: Goto, M.
PDB entry 2zpx: TNF Receptor Subtype One-selective TNF Mutant with Antagonistic Activity; R1antTNF-T8
Classification: CYTOKINE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2008-07-29
Authors: Mukai, Y., Nakamura, T., Yamagata, Y., Tsutsumi, Y.
PDB entry 2zpy: Crystal structure of the mouse radxin FERM domain complexed with the mouse CD44 cytoplasmic peptide
Classification: CELL ADHESION
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-07-31
Authors: Mori, T., Kitano, K., Terawaki, S., Maesaki, R., Fukami, Y., Hakoshima, T.
PDB entry 2zq0: Crystal structure of SusB complexed with acarbose
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-07-31
Authors: Yao, M., Tanaka, I., Kitamura, M.
PDB entry 2zq1: Exploring trypsin S3 pocket
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2008-08-03
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zq2: Exploring trypsin S3 pocket
Classification: Hydrolase/Hydrolase Inhibitor
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-08-03
Authors: Brandt, T., Baum, B., Heine, A., Klebe, G.
PDB entry 2zq3: The crystal structure of the orthorhombic form of hen egg white lysozyme at 1.6 angstroms resolution
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-08-03
Authors: Aibara, S., Suzuki, A., Kidera, A., Shibata, K., Hirose, M.
PDB entry 2zq4: The crystal structure of the orthorhombic form of hen egg white lysozyme at 2.0 angstroms resolution
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-08-03
Authors: Aibara, S., Suzuki, A., Kidera, A., Shibata, K., Yamane, T., Hirose, M.
PDB entry 2zq5: Crystal structure of sulfotransferase STF1 from Mycobacterium tuberculosis H37Rv (type1 form)
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-08-06
Authors: Tanaka, S., Kimura, M., Kakuta, Y.
PDB entry 2zq7: Apo structure of Class A beta-lactamase Toho-1 E166A/R274N/R276N triple mutant
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 0.94 Å
Deposited: 2008-08-07
Authors: Shimamura, T., Nitanai, Y., Uchiyama, T., Ago, H., Matsuzawa, H., Miyano, M.
PDB entry 2zq8: Apo structure of class a beta-lactamase Toho-1 R274N/R276N double mutant
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2008-08-07
Authors: Shimamura, T., Nitanai, Y., Uchiyama, T., Ago, H., Matsuzawa, H., Miyano, M.
PDB entry 2zq9: Cephalothin acyl-intermediate structure of class a beta-lactamase Toho-1 E166A/R274N/R276N triple mutant
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2008-08-07
Authors: Nitanai, Y., Shimamura, T., Uchiyama, T., Ishii, Y., Takehira, M., Yutani, K., Matsuzawa, H., Miyano, M.
PDB entry 2zqa: Cefotaxime acyl-intermediate structure of class a beta-lacta Toho-1 E166A/R274N/R276N triple mutant
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 0.95 Å
Deposited: 2008-08-07
Authors: Nitanai, Y., Shimamura, T., Uchiyama, T., Ishii, Y., Takehira, M., Yutani, K., Matsuzawa, H., Miyano, M.
PDB entry 2zqb: Crystal structure of a psychrotrophic RNaseHI variant with sextuple thermostabilizing mutations
Classification: HYDROLASE
Source organism: Shewanella oneidensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2008-08-07
Authors: Angkawidjaja, C., Kanaya, S.
PDB entry 2zqc: Aztreonam acyl-intermediate structure of class a beta-lactam Toho-1 E166A/R274N/R276N triple mutant
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.07 Å
Deposited: 2008-08-07
Authors: Nitanai, Y., Shimamura, T., Uchiyama, T., Ishii, Y., Takehira, M., Yutani, K., Matsuzawa, H., Miyano, M.
PDB entry 2zqd: Ceftazidime acyl-intermediate structure of class a beta-lact Toho-1 E166A/R274N/R276N triple mutant
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.19 Å
Deposited: 2008-08-07
Authors: Nitanai, Y., Shimamura, T., Uchiyama, T., Ishii, Y., Takehira, M., Yutani, K., Matsuzawa, H., Miyano, M.
PDB entry 2zqe: Crystal structure of the Smr domain of Thermus thermophilus MutS2
Classification: DNA BINDING PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-08-08
Authors: Fukui, K., Kitamura, Y., Nakagawa, N., Masui, R., Kuramitsu, S.
PDB entry 2zqj: Substrate-Free Form of Cytochrome P450BSbeta
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-08-11
Authors: Shoji, O., Fujishiro, T., Nagano, S., Hirose, T., Shiro, Y., Watanabe, Y.
PDB entry 2zqk: Crystal structure of intimin-Tir68 complex
Classification: CELL ADHESION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-08-12
Authors: Ma, Y., Gao, F., Li, D.-F., Gao, G.F.
PDB entry 2zqm: Crystal structure of the prefoldin beta subunit from Thermococcus strain KS-1
Classification: CHAPERONE
Source organism: Thermococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-08-13
Authors: Kida, H., Miki, K.
PDB entry 2zqn: Crystal structure of the earthworm R-type lectin C-half in complex with Lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Lumbricus terrestris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-08-13
Authors: Suzuki, R., Kuno, A., Hasegawa, T., Hirabayashi, J., Kasai, K., Momma, M., Fujimoto, Z.
PDB entry 2zqo: Crystal structure of the earthworm R-type lectin C-half in complex with GalNAc
Classification: SUGAR BINDING PROTEIN
Source organism: Lumbricus terrestris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-08-13
Authors: Suzuki, R., Kuno, A., Hasegawa, T., Hirabayashi, J., Kasai, K., Momma, M., Fujimoto, Z.
PDB entry 2zqp: Crystal Structure of SecYE translocon from Thermus thermophilus
Classification: PROTEIN TRANSPORT
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 6 Å
Deposited: 2008-08-14
Authors: Tsukazaki, T., Nureki, O.
PDB entry 2zqq: Crystal structure of human AUH (3-methylglutaconyl-coa hydratase) mixed with (AUUU)24A RNA
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-08-16
Authors: Kurimoto, K., Kuwasako, K., Muto, Y., Nureki, O., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zqr: Crystal structure of AUH without RNA
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-08-16
Authors: Kurimoto, K., Kuwasako, K., Muto, Y., Nureki, O., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zqs: Crystal structure of a mutant PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.902 Å
Deposited: 2008-08-19
Authors: Jobichen, C., Liou, Y.C., Sivaraman, J.
PDB entry 2zqt: Crystal structure of a mutant PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.462 Å
Deposited: 2008-08-19
Authors: Jobichen, C., Liou, Y.C., Sivaraman, J.
PDB entry 2zqu: Crystal structure of a mutant PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-08-19
Authors: Jobichen, C., Liou, Y.C., Sivaraman, J.
PDB entry 2zqv: Crystal structure of a mutant PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.498 Å
Deposited: 2008-08-20
Authors: Jobichen, C., Liou, Y.C., Sivaraman, J.
PDB entry 2zqx: Cytochrome P450BSbeta cocrystallized with heptanoic acid
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2008-08-22
Authors: Shoji, O., Fujishiro, T., Nagano, S., Hirose, T., Shiro, Y., Watanabe, Y.
PDB entry 2zqy: T-state structure of allosteric L-lactate dehydrogenase from Lactobacillus casei
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus casei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-08-22
Authors: Arai, K., Ishimitsu, T., Fushinobu, S., Uchikoba, H., Matsuzawa, H., Taguchi, H.
PDB entry 2zqz: R-state structure of allosteric L-lactate dehydrogenase from Lactobacillus casei
Classification: OXIDOREDUCTASE
Source organism: Lactobacillus casei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-08-22
Authors: Arai, K., Ishimitsu, T., Fushinobu, S., Uchikoba, H., Matsuzawa, H., Taguchi, H.
PDB entry 2zr0: MSRECA-Q196E mutant
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-08-22
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zr1: Agglutinin from Abrus Precatorius
Classification: PLANT PROTEIN
Source organism: Abrus precatorius
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-08-22
Authors: Cheng, J., Lu, T.H., Liu, C.L., Lin, J.Y.
PDB entry 2zr2: Crystal structure of seryl-tRNA synthetase from Pyrococcus horikoshii complexed with ATP
Classification: LIGASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-08-22
Authors: Itoh, Y., Sekine, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zr3: Crystal structure of seryl-tRNA synthetase from Pyrococcus horikoshii
Classification: LIGASE
Source organism: Pyrococcus horikoshii
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-08-22
Authors: Itoh, Y., Sekine, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
PDB entry 2zr4: Crystal structure of a mutant PIN1 peptidyl-prolyl cis-trans isomerase
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-08-22
Authors: Jobichen, C., Yih-Cherng, L., Sivaraman, J.
PDB entry 2zr5: Crystal structure of a mutant PIN1 peptidyl-prolyl cis-trans isomerase
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-08-22
Authors: Jobichen, C., Yih-Cherng, L., Sivaraman, J.
PDB entry 2zr6: Crystal structure of a mutant PIN1 peptidyl-prolyl cis-trans isomerase
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-08-22
Authors: Jobichen, C., Yih-Cherng, L., Sivaraman, J.
PDB entry 2zr7: Msreca native form II'
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2008-08-25
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zr8: Crystal Structure of Modified Serine Racemase complexed with Serine
Classification: ISOMERASE
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-08-25
Authors: Goto, M.
PDB entry 2zr9: MsRecA Q196E dATP form IV
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.
PDB entry 2zra: MsRecA Q196E ATPgS
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-08-27
Authors: Prabu, J.R., Manjunath, G.P., Chandra, N.R., Muniyappa, K., Vijayan, M.