LiteFold/PDB huggingface dataset:
PDB entry 8g0p: Crystal structure of the human Ndc80:Nuf2 loop region
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-02-01
Authors: Zahm, J.A., Jenni, S., Harrison, S.C.
PDB entry 8g0q: Crystal structure of the yeast Ndc80:Nuf2 head region with a bound Dam1 segment
Classification: CELL CYCLE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.22 Å
Deposited: 2023-02-01
Authors: Zahm, J.A., Jenni, S., Harrison, S.C.
PDB entry 8g0r: Crystal Structure of Acetyl-CoA synthetase in complex with a cyclopentyl ester AMP inhibitor from Cryptococcus neoformans H99
Classification: LIGASE
Source organism: Cryptococcus neoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2023-02-01
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8g0s: Crystal Structure of Acetyl-CoA synthetase in complex with a cyclopentyl ester AMP inhibitor from Cryptococcus neoformans H99 (tetragonal form)
Classification: LIGASE
Source organism: Cryptococcus neoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-02-01
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8g0t: Crystal Structure of Acetyl-CoA synthetase in complex with a cyclopropyl ester AMP inhibitor from Cryptococcus neoformans H99
Classification: LIGASE
Source organism: Cryptococcus neoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-02-01
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8g0u: Crystal Structure of Acetyl-CoA synthetase in complex with an isopropyl ester AMP inhibitor from Cryptococcus neoformans H99
Classification: LIGASE
Source organism: Cryptococcus neoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-02-01
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8g0v: Crystal Structure of Acetyl-CoA synthetase in complex with a propyne ester AMP inhibitor from Cryptococcus neoformans H99
Classification: LIGASE
Source organism: Cryptococcus neoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-02-01
Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 8g0w: Crystal structure of human norovirus GII.4 P domain in complex with Nanobody M4
Classification: VIRAL PROTEIN
Source organism: Lama glama; Norovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.87 Å
Deposited: 2023-02-01
Authors: Hu, L., Salmen, W., Sankaran, B., Prasad, B.V.V.
PDB entry 8g0x: Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Pro10DPro11 turn
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-01
Authors: Harmon, T.W., Horne, W.S.
PDB entry 8g0y: Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Iva10Asn11 turn
Classification: DE NOVO PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2023-02-01
Authors: Harmon, T.W., Horne, W.S.
PDB entry 8g0z: Mutant bacteriophage T4 gp41 helicase hexamer bound with single strand DNA and ATPgammaS in the stalled primosome
Classification: REPLICATION
Source organism: Escherichia phage T4; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.61 Å
Deposited: 2023-02-01
Authors: Feng, X., Li, H.
PDB entry 8g10: Structure of Ternary Complex of cGAS with dsDNA and Bound ITP and GTP
Classification: TRANSFERASE/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.47 Å
Deposited: 2023-02-01
Authors: Wu, S., Sohn, J.
PDB entry 8g12: CryoEM structure of nuclear GAPDH under 8h Oxidative Stress
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.17 Å
Deposited: 2023-02-01
Authors: Choi, W.Y., Wu, H., Cheng, Y.F.
PDB entry 8g13: CryoEM structure of cytosolic GAPDH under 8h Oxidative Stress
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-02-01
Authors: Choi, W.Y., Wu, H., Cheng, Y.F.
PDB entry 8g14: CryoEM structure of cytosolic GAPDH under 8h Oxidative Stress, class2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-02-01
Authors: Choi, W.Y., Wu, H., Cheng, Y.F.
PDB entry 8g15: CryoEM structure of nuclear GAPDH under 24h Oxidative Stress
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.07 Å
Deposited: 2023-02-01
Authors: Choi, W.Y., Wu, H., Cheng, Y.F.
PDB entry 8g16: CryoEM structure of cytoplasmic GAPDH under 24h Oxidative Stress
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.07 Å
Deposited: 2023-02-01
Authors: Choi, W.Y., Wu, H., Cheng, Y.F.
PDB entry 8g17: CryoEM structure of wild-type GAPDH
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.98 Å
Deposited: 2023-02-01
Authors: Choi, W.Y., Wu, H., Cheng, Y.F.
PDB entry 8g18: Heterodimer of the GluN1b-GluN2B NMDA receptor amino-terminal domains bound to allosteric inhibitor 93-108
Classification: MEMBRANE PROTEIN/INHIBITOR
Source organism: Rattus norvegicus; Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-02-01
Authors: Regan, M.C., Furukawa, H.
PDB entry 8g19: Crystal structure of monoreactive 4C05 human Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2023-02-01
Authors: Borowska, M.T., Adams, E.J.
PDB entry 8g1a: Cryo-EM structure of Nav1.7 with CBD
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-02-01
Authors: Fan, X., Huang, J., Yan, N.
PDB entry 8g1b: Crystal structure of polyreactive 2G02 human Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2023-02-01
Authors: Borowska, M.T., Adams, E.J.
PDB entry 8g1c: Crystal structure of polyreactive 3B03 human Fab
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-02-01
Authors: Borowska, M.T., Adams, E.J.
PDB entry 8g1e: Structure of ACLY-D1026A-products-asym
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-02-02
Authors: Wei, X., Marmorstein, R.
PDB entry 8g1f: Structure of ACLY-D1026A-products
Classification: LYASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2023-02-02
Authors: Wei, X., Marmorstein, R.
PDB entry 8g1h: Ancestral protein AncTh of Phosphomethylpirimidine kinases family
Classification: TRANSFERASE
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-02-02
Authors: Perez, M., Munoz, S., Cea, P., Castro-Fernandez, V.
PDB entry 8g1i: SpCas9 with sgRNA and target DNA
Classification: HYDROLASE
Source organism: Streptococcus pyogenes; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-02-02
Authors: Korolev, S., Gagnon, K.
PDB entry 8g1j: Structure of Ternary Complex of cGAS with dsDNA and Bound ATP and ITP
Classification: TRANSFERASE/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2023-02-02
Authors: Wu, S., Sohn, J.
PDB entry 8g1l: Lectin domain of Aap (Staphylococcus epidermidis Accumulation Associated Protein)
Classification: CELL ADHESION
Source organism: Staphylococcus epidermidis RP62A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.06 Å
Deposited: 2023-02-02
Authors: Maciag, J.J., Herr, A.B.
PDB entry 8g1m: Lectin domain of SasG (Staphylococcus aureus Surface protein G)
Classification: CELL ADHESION
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2023-02-02
Authors: Maciag, J.J., Herr, A.B.
PDB entry 8g1n: Structure of Campylobacter concisus PglC I57M/Q175M Variant with modeled C-terminus
Classification: MEMBRANE PROTEIN
Source organism: Campylobacter concisus 13826
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2023-02-02
Authors: Dodge, G.J., Ray, L.C., Das, D., Imperiali, B., Allen, K.N.
PDB entry 8g1p: Co-crystal structure of Compound 11 in complex with the bromodomain of human SMARCA2 and pVHL:ElonginC:ElonginB
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-02-02
Authors: Ghimire Rijal, S., Wurz, R.P., Vaish, A.
PDB entry 8g1q: Co-crystal structure of Compound 1 in complex with the bromodomain of human SMARCA4 and pVHL:ElonginC:ElonginB
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.73 Å
Deposited: 2023-02-02
Authors: Ghimire Rijal, S., Wurz, R.P., Vaish, A.
PDB entry 8g1r: A Vibrio cholerae viral satellite enables efficient horizontal transfer by using an external scaffold to assemble hijacked coat proteins into small capsids
Classification: VIRUS LIKE PARTICLE
Source organism: Vibrio cholerae; Vibrio phage ICP1_2011_A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-02-02
Authors: Subramanian, S., Boyd, C.M., Seed, K.D., Parent, K.N.
PDB entry 8g1s: Cryo-EM structure of 3DVA component 1 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase minus preQ1 ligand
Classification: TRANSCRIPTION
Source organism: Bacillus subtilis; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-02-02
Authors: Porta, J.C., Chauvier, A., Deb, I., Ellinger, E., Frank, A.T., Meze, K., Ohi, M.D., Walter, N.G.
PDB entry 8g1t: Crystal structure of Bax core domain BH3-groove dimer - tetrameric fraction P21
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.092 Å
Deposited: 2023-02-02
Authors: Cowan, A.D., Colman, P.M., Czabotar, P.E., Miller, M.S.
PDB entry 8g1u: Structure of the methylosome-Lsm10/11 complex
Classification: TRANSFERASE
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2023-02-03
Authors: Lin, M., Paige, A., Tong, L.
PDB entry 8g1v: Crystal Structure Matriptase (C731S) in Complex with Inhibitor MM1132-2
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-02-03
Authors: Lovell, S., Kashipathy, M.M., Battaile, K.P., Janetka, J.W.
PDB entry 8g1w: Crystal Structure Matriptase (C731S) in Complex with Inhibitor VD4162B
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-02-03
Authors: Lovell, S., Kashipathy, M.M., Battaile, K.P., Janetka, J.W.
PDB entry 8g1y: Crystal Structure of the Threonine Synthase from Streptococcus pneumoniae in complex with Pyridoxal 5-phosphate.
Classification: LYASE
Source organism: Streptococcus pneumoniae TIGR4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2023-02-03
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Satchell, K.J.F., Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 8g1z: Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with inhibitor Mz317
Classification: HYDROLASE/INHIBITOR
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2023-02-03
Authors: Tararina, M.A., Christianson, D.W.
PDB entry 8g20: Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with inhibitor Mz327
Classification: HYDROLASE/INHIBITOR
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.766 Å
Deposited: 2023-02-03
Authors: Tararina, M.A., Christianson, D.W.
PDB entry 8g21: Reelin C-Terminal Region
Classification: SUGAR BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-02-03
Authors: Chandrahas, A.S., Marino, C., Arboleda-Velasquez, J.F.
PDB entry 8g22: Crystal Structure of the dTDP-4-dehydrorhamnose Reductase from Streptococcus pneumoniae.
Classification: OXIDOREDUCTASE
Source organism: Streptococcus pneumoniae Taiwan19F-14
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2023-02-03
Authors: Minasov, G., Shuvalova, L., Brunzelle, J.S., Kiryukhina, O., Satchell, K.J.F., Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 8g23: Structure of Ternary Complex of cGAS with dsDNA and Bound pppIpA
Classification: IMMUNE SYSTEM/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2023-02-03
Authors: Wu, S., Sohn, J.
PDB entry 8g24: Crystal Structure of Cathepsin-G and Neutrophil Elastase Inhibited by S. aureus EapH2 at pH 5.5
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2023-02-03
Authors: Mishra, N.B., Geisbrecht, B.V.
PDB entry 8g25: Crystal Structure of Cathepsin-G and Neutrophil Elastase Inhibited by S. aureus EapH2 at pH 7.5
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-03
Authors: Mishra, N.B., Geisbrecht, B.V.
PDB entry 8g26: Crystal Structure of Cathepsin-G and Neutrophil Elastase Inhibited by S. aureus EapH2 at pH 8.5
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-02-03
Authors: Mishra, N.B., Geisbrecht, B.V.
PDB entry 8g27: Hybrid aspen cellulose synthase-8 bound to UDP
Classification: PLANT PROTEIN, Transferase
Source organism: Populus tremula x Populus tremuloides
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-02-03
Authors: Verma, P., Zimmer, J.
PDB entry 8g28: Crystal Structure of the C-terminal Fragment of AAA ATPase from Streptococcus pneumoniae.
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae TIGR4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2023-02-03
Authors: Minasov, G., Shuvalova, L., Brunzelle, J.S., Kiryukhina, O., Satchell, K.J.F., Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 8g29: Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-02-03
Authors: Aleksandrova, E.V., Wu, K.J.Y., Tresco, B.I.C., Syroegin, E.A., Killeavy, E.E., Balasanyants, S.M., Svetlov, M.S., Gregory, S.T., Atkinson, G.C., Myers, A.G., Polikanov, Y.S.
PDB entry 8g2a: Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2023-02-03
Authors: Aleksandrova, E.V., Wu, K.J.Y., Tresco, B.I.C., Syroegin, E.A., Killeavy, E.E., Balasanyants, S.M., Svetlov, M.S., Gregory, S.T., Atkinson, G.C., Myers, A.G., Polikanov, Y.S.
PDB entry 8g2b: Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2023-02-03
Authors: Aleksandrova, E.V., Wu, K.J.Y., Tresco, B.I.C., Syroegin, E.A., Killeavy, E.E., Balasanyants, S.M., Svetlov, M.S., Gregory, S.T., Atkinson, G.C., Myers, A.G., Polikanov, Y.S.
PDB entry 8g2c: Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2023-02-03
Authors: Aleksandrova, E.V., Wu, K.J.Y., Tresco, B.I.C., Syroegin, E.A., Killeavy, E.E., Balasanyants, S.M., Svetlov, M.S., Gregory, S.T., Atkinson, G.C., Myers, A.G., Polikanov, Y.S.
PDB entry 8g2d: Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolution
Classification: RIBOSOME
Source organism: Escherichia coli; Thermus thermophilus HB8; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-02-03
Authors: Aleksandrova, E.V., Wu, K.J.Y., Tresco, B.I.C., Syroegin, E.A., Killeavy, E.E., Balasanyants, S.M., Svetlov, M.S., Gregory, S.T., Atkinson, G.C., Myers, A.G., Polikanov, Y.S.
PDB entry 8g2e: PKM2 bound to compound 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.838 Å
Deposited: 2023-02-03
Authors: Stuckey, J.A.
PDB entry 8g2f: Crystal Structure of PRMT3 with Compound II710
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2023-02-03
Authors: Song, X., Dong, A., Deng, Y., Huang, R., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 8g2g: Crystal structure of PRMT3 with compound YD1113
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2023-02-03
Authors: Song, X., Dong, A., Arrowsmith, C.H., Edwards, A.M., Deng, Y., Huang, R., Min, J.
PDB entry 8g2h: Crystal Structure of PRMT4 with Compound YD1113
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2023-02-03
Authors: Song, X., Dong, A., Deng, Y., Huang, R., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 8g2i: Crystal Structure of PRMT4 with Compound YD1290
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2023-02-03
Authors: Song, X., Dong, A., Deng, Y., Huang, R., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 8g2j: Hybrid aspen cellulose synthase-8 bound to UDP-glucose
Classification: PLANT PROTEIN
Source organism: Populus tremula x P. tremuloides/Amanita muscaria mixed EST library
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-02-04
Authors: Verma, P., Zimmer, J.
PDB entry 8g2k: Structure of the H3 hemagglutinin of A/California/7/2004
Classification: VIRAL PROTEIN
Source organism: Alphainfluenzavirus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-02-05
Authors: Venkatramani, L., Mooers, B.H.M., Air, G.M.
PDB entry 8g2l: Horse liver alcohol dehydrogense His-51 Gln form complexed with NAD+ and 2,2,2-trifluoroethanol
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-02-05
Authors: Plapp, B.V.
PDB entry 8g2m: The tumor activated anti-CTLA-4 monoclonal antibody XTX101 demonstrates tumor-growth inhibition and tumor-selective pharmacodynamics in mouse models of cancer
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-05
Authors: Williams, J.C., Williams, J.C.
PDB entry 8g2n: Crystal structure of Tetrahymena thermophila G-rich DNA with novel ligand PyDH2
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2023-02-06
Authors: Martin, K.N., Yatsunyk, L.A.
PDB entry 8g2o: Fab structure - Anti-ApoE-7C11 antibody
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-02-06
Authors: Marino, C., Arboleda-Velasquez, J.F.
PDB entry 8g2p: Structure of Ternary Complex of cGAS with dsDNA and Bound ATP and GTP
Classification: TRANSFERASE/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.521 Å
Deposited: 2023-02-06
Authors: Wu, S., Sohn, J.
PDB entry 8g2q: Structure of Ternary Complex of mouse cGAS with dsDNA and Bound GTP
Classification: TRANSFERASE/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2023-02-06
Authors: Wu, S., Sohn, J.
PDB entry 8g2r: CRYSTAL STRUCTURE OF THE KPC-2 D179N VARIANT IN COMPLEX WITH AVIBACTAM
Classification: HYDROLASE/Antibiotic
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2023-02-06
Authors: Alsenani, T., van den Akker, F.
PDB entry 8g2s: Horse liver alcohol dehydrogense His-51-Gln form complexed with NAD+ and capric acid
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2023-02-06
Authors: Plapp, B.V.
PDB entry 8g2t: CRYSTAL STRUCTURE OF THE KPC-2 D179N VARIANT IN COMPLEX WITH RELEBACTAM (IMINE HYDROLYSIS INTERMEDIATE)
Classification: HYDROLASE/Inhibitor
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2023-02-06
Authors: Alsenani, T., van den Akker, F.
PDB entry 8g2u: Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-02-06
Authors: Bhattacharjee, S., Brown, P.Z., Frank, J.
PDB entry 8g2v: Cryo-EM structure of recombinant human LECT2 amyloid fibril core
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.715 Å
Deposited: 2023-02-06
Authors: Richards, L.S., Flores, M.D., Zink, S., Schibrowsky, N.A., Sawaya, M.R., Rodriguez, J.A.
PDB entry 8g2w: Cryo-EM structure of 3DVA component 2 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase minus preQ1 ligand
Classification: TRANSCRIPTION
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-02-06
Authors: Porta, J.C., Chauvier, A., Deb, I., Ellinger, E., Frank, A.T., Meze, K., Ohi, M.D., Walter, N.G.
PDB entry 8g2x: Horse liver alcohol dehydrogense His-51-Gln form complexed with NAD+ and pyrazole
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2023-02-06
Authors: Plapp, B.V.
PDB entry 8g2y: Cryo-EM structure of ADGRF1 coupled to miniGs/q
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2023-02-06
Authors: Jones, D., Rawson, S., Blacklow, S.
PDB entry 8g2z: 48-nm doublet microtubule from Tetrahymena thermophila strain CU428
Classification: STRUCTURAL PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.1 Å
Deposited: 2023-02-06
Authors: Black, C.S., Kubo, S., Yang, S.K., Bui, K.H.
PDB entry 8g30: N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 4 FNI19 Fab molecules
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-02-06
Authors: Dang, H.V., Snell, G.
PDB entry 8g31: Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-02-06
Authors: Bhattacharjee, S., Brown, P.Z., Frank, J.
PDB entry 8g32: Pro-form of a CDCL short from E. anophelis
Classification: TOXIN
Source organism: Elizabethkingia anophelis Ag1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-02-06
Authors: Johnstone, B.A., Christie, M.P., Morton, C.J., Parker, M.W.
PDB entry 8g33: Activated form of a CDCL long protein
Classification: TOXIN
Source organism: Elizabethkingia anophelis Ag1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2023-02-06
Authors: Johnstone, B.A., Christie, M.P., Morton, C.J., Parker, M.W.
PDB entry 8g34: Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-02-06
Authors: Bhattacharjee, S., Brown, P.Z., Frank, J.
PDB entry 8g35: Crystal structure of F182L-CYP199A4 in complex with (S)-4-(2-hydroxy-3-oxobutan-2-yl)benzoic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-02-06
Authors: Lee, J.H.Z., Bell, S.G., Bruning, J.B.
PDB entry 8g36: Crystal structure of F182L-CYP199A4 in complex with terephthalic acid
Classification: OXIDOREDUCTASE
Source organism: Rhodopseudomonas palustris HaA2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-06
Authors: Lee, J.H.Z., Bruning, J.B., Bell, S.G.
PDB entry 8g38: Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate
Classification: RIBOSOME
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-02-07
Authors: Bhattacharjee, S., Brown, P.Z., Frank, J.
PDB entry 8g39: Horse liver alcohol dehydrogense His-51-Gln form complexed with NADH and N-cyclohexylformamide
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2023-02-07
Authors: Plapp, B.V.
PDB entry 8g3a: BceAB-S nucleotide free TM state 1
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-02-07
Authors: George, N.L., Orlando, B.J.
PDB entry 8g3b: BceAB-S nucleotide free TM state 2
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-02-07
Authors: George, N.L., Orlando, B.J.
PDB entry 8g3c: Crystal structure of human WDR5 in complex with N-[(2'-cyano[1,1'-biphenyl]-4-yl)methyl]-3-hydroxy-6-methyl-4-oxo-4H-pyran-2-carboxamide (compound 1, WDR5-MYC PPI inhibitor)
Classification: ONCOPROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-02-07
Authors: Zhao, M.
PDB entry 8g3d: 48-nm doublet microtubule from Tetrahymena thermophila strain K40R
Classification: STRUCTURAL PROTEIN
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-02-07
Authors: Black, C.S., Kubo, S., Yang, S.K., Bui, K.H.
PDB entry 8g3e: Crystal structure of human WDR5 in complex with (1M)-N-[(3,5-difluoro[1,1'-biphenyl]-4-yl)methyl]-6-methyl-4-oxo-1-(pyridin-3-yl)-1,4-dihydropyridazine-3-carboxamide (compound 2, WDR5-MYC inhibitor)
Classification: ONCOPROTEIN/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2023-02-07
Authors: Zhao, M.
PDB entry 8g3f: BceAB-S nucleotide free BceS state 1
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-02-07
Authors: George, N.L., Orlando, B.J.
PDB entry 8g3g: CryoEM structure of yeast recombination mediator Rad52
Classification: RECOMBINATION
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-02-07
Authors: Deveryshetty, J., Basore, K., Rau, M., Fitzpatrick, J.A.J., Antony, E.
PDB entry 8g3h: Structure of cobalamin-dependent methionine synthase (MetH) in a resting state
Classification: TRANSFERASE
Source organism: Thermus filiformis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-02-07
Authors: Watkins, M.B., Ando, N.
PDB entry 8g3i: Non-ribosomal PCP-C didomain (thioether stabilised glycolic acid) acceptor bound state
Classification: BIOSYNTHETIC PROTEIN
Source organism: Thermobifida fusca YX
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2023-02-08
Authors: Ho, Y.T.C., Izore, T., Cryle, M.J.
PDB entry 8g3j: Non-ribosomal PCP-C didomain R2577G (thioether stabilised glycolic acid) acceptor bound state
Classification: BIOSYNTHETIC PROTEIN
Source organism: Thermobifida fusca YX
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-02-08
Authors: Ho, Y.T.C., Izore, T., Cryle, M.J.
PDB entry 8g3k: Cryo-EM imaging scaffold subunits A and B used to display KRAS G12C complex with GDP
Classification: STRUCTURAL PROTEIN
Source organism: synthetic construct; Thermoplasma acidophilum
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-02-08
Authors: Castells-Graells, R., Sawaya, M.R., Yeates, T.O.
PDB entry 8g3l: BceAB-S nucleotide free BceS state 2
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-02-08
Authors: George, N.L., Orlando, B.J.
PDB entry 8g3m: N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 3 FNI9 Fab molecules
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-02-08
Authors: Dang, H.V., Snell, G.
PDB entry 8g3n: N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 4 FNI9 Fab molecules
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-02-08
Authors: Dang, H., Snell, G.
PDB entry 8g3o: N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 3 FNI9 Fab molecules
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-02-08
Authors: Dang, H.V., Snell, G.
PDB entry 8g3p: N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 4 FNI9 Fab molecules
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-02-08
Authors: Dang, H.V., Snell, G.
PDB entry 8g3q: N2 neuraminidase of A/Tanzania/205/2010 H3N2 in complex with 3 FNI17 Fab molecules
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-02-08
Authors: Dang, H.V., Snell, G.
PDB entry 8g3r: N2 neuraminidase of A/Tanzania/205/2010 H3N2 with S245N S247T mutations in complex with one FNI17 Fab molecule
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-02-08
Authors: Dang, H.V., Snell, G.
PDB entry 8g3s: MBP-Mcl1 in complex with ligand 11
Classification: APOPTOSIS
Source organism: Homo sapiens; Serratia sp. FS14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-02-08
Authors: Miller, B.R., Shaffer, P.
PDB entry 8g3t: MBP-Mcl1 in complex with ligand 12
Classification: APOPTOSIS
Source organism: Homo sapiens; Serratia sp. FS14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2023-02-08
Authors: Miller, B.R., Shaffer, P.
PDB entry 8g3u: MBP-Mcl1 in complex with ligand 21
Classification: APOPTOSIS
Source organism: Homo sapiens; Serratia sp. FS14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2023-02-08
Authors: Miller, B.R., Shaffer, P.
PDB entry 8g3v: N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 4 FNI19 Fab molecules
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-02-08
Authors: Dang, H.V., Snell, G.
PDB entry 8g3w: MBP-Mcl1 in complex with ligand 28
Classification: APOPTOSIS
Source organism: Homo sapiens; Serratia sp. FS14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2023-02-08
Authors: Miller, B.R., Shaffer, P.
PDB entry 8g3x: MBP-Mcl1 in complex with ligand 32
Classification: APOPTOSIS
Source organism: Homo sapiens; Serratia sp. FS14
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2023-02-08
Authors: Miller, B.R., Shaffer, P.
PDB entry 8g3y: MBP-Mcl1 in complex with ligand 34
Classification: APOPTOSIS
Source organism: Homo sapiens; Serratia sp. (strain FS14)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-02-08
Authors: Miller, B.R., Shaffer, P.
PDB entry 8g3z: Neuraminidase of B/Massachusetts/02/2012 (Yamagata) in complex with 4 FNI17 Fab molecules
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza B virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2023-02-08
Authors: Dang, H.V., Snell, G.
PDB entry 8g40: N2 neuraminidase of A/Hong_Kong/2671/2019 in complex with 3 FNI19 Fab molecules
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-02-08
Authors: Dang, H.V., Snell, G.
PDB entry 8g41: Horse liver alcohol dehydrogense His-51-Gln form complexed with NADH
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-02-08
Authors: Plapp, B.V.
PDB entry 8g42: KRAS G12C complex with GDP imaged on a cryo-EM imaging scaffold
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2023-02-08
Authors: Castells-Graells, R., Sawaya, M.R., Yeates, T.O.
PDB entry 8g43: Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with 3-(3-(2-(methylamino)-2-oxoethyl)-4-oxo-3,4-dihydroquinazolin-2-yl)propanoic acid
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-02-08
Authors: Harding, R.J., Franzoni, I., Mann, M.K., Szewczyk, M., Mirabi, B., Owens, D.D.G., Ackloo, S., Scheremetjew, A., Juarez-Ornelas, K.A., Sanichar, R., Baker, R.J., Dank, C., Brown, P.J., Barsyte-Lovejoy, D., Santhakumar, V., Schapira, M., Lautens, M., Arrowsmith, C.H., Structural Genomics Consortium (SGC)
PDB entry 8g44: Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with 3-(3-(2-(benzylamino)-2-oxoethyl)-4-oxo-3,4-dihydroquinazolin-2-yl)propanoic acid
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-02-08
Authors: Harding, R.J., Franzoni, I., Mann, M.K., Szewczyk, M., Mirabi, B., Owens, D.D.G., Ackloo, S., Scheremetjew, A., Juarez-Ornelas, K.A., Sanichar, R., Baker, R.J., Dank, C., Brown, P.J., Barsyte-Lovejoy, D., Santhakumar, V., Schapira, M., Lautens, M., Arrowsmith, C.H., Structural Genomics Consortium (SGC)
PDB entry 8g45: Structure of HDAC6 zinc-finger ubiquitin binding domain in complex with SGC-UBD253 chemical probe
Classification: HYDROLASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2023-02-08
Authors: Harding, R.J., Franzoni, I., Mann, M.K., Szewczyk, M., Mirabi, B., Owens, D.D.G., Ackloo, S., Scheremetjew, A., Juarez-Ornelas, K.A., Sanichar, R., Baker, R.J., Dank, C., Brown, P.J., Barsyte-Lovejoy, D., Santhakumar, V., Schapira, M., Lautens, M., Arrowsmith, C.H., Structural Genomics Consortium (SGC)
PDB entry 8g46: Cryo-EM structure of DDB1deltaB-DDA1-DCAF16-BRD4(BD2)-MMH2
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-02-08
Authors: Ma, M.W., Hunkeler, M., Jin, C.Y., Fischer, E.S.
PDB entry 8g47: KRAS G12C complex with GDP and AMG 510 imaged on a cryo-EM imaging scaffold
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.19 Å
Deposited: 2023-02-08
Authors: Castells-Graells, R., Sawaya, M.R., Yeates, T.O.
PDB entry 8g48: FphE, Staphylococcus aureus fluorophosphonate-binding serine hydrolases E, unbound, dimer crystal form 3
Classification: HYDROLASE
Source organism: Staphylococcus aureus subsp. aureus USA300
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2023-02-08
Authors: Fellner, M.
PDB entry 8g49: FphE, Staphylococcus aureus fluorophosphonate-binding serine hydrolases E, Oxadiazolone compound 3 bound, dimer crystal form 2
Classification: HYDROLASE
Source organism: Staphylococcus aureus subsp. aureus USA300
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2023-02-08
Authors: Fellner, M., Bakker, A.T., Martin, N.I., Stelt, M.
PDB entry 8g4a: Human ARNT PAS-B complexed with KG-548 small molecule
Classification: TRANSCRIPTION/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2023-02-08
Authors: Xu, X., Isiorho, E.A., Pimentel Marcelino, L., Gardner, K.H.
PDB entry 8g4b: Crystal structure of heterodimeric Crotoxin B from Crotalus durissus collilineatus
Classification: HYDROLASE
Source organism: Crotalus durissus collilineatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2023-02-09
Authors: Salvador, G.H.M., Borges, R.J., Fontes, M.R.M.
PDB entry 8g4c: BceABS ATPgS high res TM
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-02-09
Authors: George, N.L., Orlando, B.J.
PDB entry 8g4d: BceABS ATPgS tilted BceS
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-02-09
Authors: George, N.L., Orlando, B.J.
PDB entry 8g4e: Green Fluorescence Protein imaged on a cryo-EM imaging scaffold
Classification: SIGNALING PROTEIN
Source organism: Aequorea victoria; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-02-09
Authors: Castells-Graells, R., Sawaya, M.R., Yeates, T.O.
PDB entry 8g4f: KRAS G12V complex with GDP imaged on a cryo-EM imaging scaffold
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.91 Å
Deposited: 2023-02-09
Authors: Castells-Graells, R., Sawaya, M.R., Yeates, T.O.
PDB entry 8g4g: Crystal Engineering with One 8-mer DNA
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2023-02-09
Authors: Zhao, J., Zhang, C., Lu, B., Seeman, N.C., Noinaj, N., Sha, R., Mao, C.
PDB entry 8g4h: KRAS G13C complex with GDP imaged on a cryo-EM imaging scaffold
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-02-09
Authors: Castells-Graells, R., Sawaya, M.R., Yeates, T.O.
PDB entry 8g4i: 40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V1 conformation
Classification: RIBOSOME
Source organism: Giardia intestinalis assemblage A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2023-02-09
Authors: Eiler, D.R., Wimberly, B.T., Bilodeau, D.Y., Rissland, O.S., Kieft, J.S.
PDB entry 8g4j: Crystal structure of Cavia porcellus (guinea pig) importin-alpha 1 in cargo-free state
Classification: TRANSPORT PROTEIN
Source organism: Cavia porcellus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2023-02-09
Authors: Hawker, J.E., Roby, J.A., Stewart, M., Forwood, J.K.
PDB entry 8g4k: Complex of TbRII mini protein binder bound to the TbRII ECD
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2023-02-09
Authors: Schwartze, T.S., Hinck, A.P.
PDB entry 8g4l: Cryo-EM structure of the human cardiac myosin filament
Classification: CONTRACTILE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.4 Å
Deposited: 2023-02-10
Authors: Dutta, D., Nguyen, V., Padron, R., Craig, R.
PDB entry 8g4m: Vaccine-elicited human antibody 2C06 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2023-02-10
Authors: Wang, S., Morano, N.C., Shapiro, L., Kwong, P.D.
PDB entry 8g4n: Native GABA-A receptor from the mouse brain, alpha1-beta2-gamma2 subtype, in complex with GABA, Zolpidem, and endogenous neurosteroids
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2023-02-10
Authors: Sun, C., Gouaux, E.
PDB entry 8g4o: Native GABA-A receptor from the mouse brain, alpha1-beta2-gamma2 subtype, in complex with didesethylflurazepam and endogenous GABA
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2023-02-10
Authors: Sun, C., Gouaux, E.
PDB entry 8g4p: Crystal structure of the peanut allergen Ara h 2 bound by two neutralizing antibodies 13T1 and 13T5
Classification: ALLERGEN
Source organism: Arachis hypogaea; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2023-02-10
Authors: Pedersen, L.C., Mueller, G.A., Min, J.
PDB entry 8g4s: 40S ribosomal subunit of the 80S Giardia intestinalis assemblage A ribosome with Emetine bound in V2 conformation with mRNA and three tRNAs.
Classification: RIBOSOME
Source organism: Giardia intestinalis assemblage A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2023-02-10
Authors: Eiler, D.R., Wimberly, B.T., Bilodeau, D.Y., Rissland, O.S., Kieft, J.S.
PDB entry 8g4t: Vaccine-elicited human antibody 2C09 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.81 Å
Deposited: 2023-02-10
Authors: Wang, S., Kwong, P.D.
PDB entry 8g4u: Final ketosynthase+acyltransferase of the erythromycin modular polyketide synthase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharopolyspora erythraea
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-02-10
Authors: Keatinge-Clay, A.T.
PDB entry 8g4v: Horse liver alcohol dehydrogense His-51-Gln form complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol
Classification: OXIDOREDUCTASE
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2023-02-10
Authors: Plapp, B.V., Subramanian, R.
PDB entry 8g4w: Cryo-EM consensus structure of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase plus preQ1 ligand
Classification: TRANSCRIPTION
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-02-10
Authors: Porta, J.C., Chauvier, A., Deb, I., Ellinger, E., Frank, A.T., Meze, K., Ohi, M.D., Walter, N.G.
PDB entry 8g4x: Native GABA-A receptor from the mouse brain, meta-alpha1-alpha3-beta2-gamma2 subtype, in complex with GABA and allopregnanolone
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.56 Å
Deposited: 2023-02-10
Authors: Sun, C., Gouaux, E.
PDB entry 8g4y: Structure of ZNRF3 ECD bound to peptide MK1-3.6.10
Classification: LIGASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2023-02-10
Authors: Harris, S.F., Wu, P.
PDB entry 8g4z: E. coli DHFR complex with NADP+ and folate: EF-X off model by Laue diffraction (no electric field)
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-02-10
Authors: Greisman, J.B., Dalton, K.M., Brookner, D.E., Klureza, M.A., Hekstra, D.R.
PDB entry 8g50: E. coli DHFR complex with NADP+ and folate: EF-X excited state model by Laue diffraction (electric field along b axis; 8-fold extrapolation of structure factor differences)
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-02-10
Authors: Greisman, J.B., Dalton, K.M., Brookner, D.E., Klureza, M.A., Hekstra, D.R.
PDB entry 8g52: Crystal structure of a bacterial TPAT family transporter
Classification: LIPID BINDING PROTEIN
Source organism: Enhygromyxa salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-02-11
Authors: Dassama, L.M.K., Zhai, L.
PDB entry 8g53: Crystal structure of a bacterial TPAT family transporter
Classification: LIPID BINDING PROTEIN
Source organism: Enhygromyxa salina
Experimental method: X-RAY DIFFRACTION
Resolution: 1.03 Å
Deposited: 2023-02-11
Authors: Dassama, L.M.K., Zhai, L.
PDB entry 8g54: Temperature-dependent structures of tau aggregates
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: SOLID-STATE NMR
Deposited: 2023-02-11
Authors: El Mammeri, N., Duan, P., Dregni, A.J., Hong, M.
PDB entry 8g55: Temperature-dependent structures of tau aggregates
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: SOLID-STATE NMR
Deposited: 2023-02-11
Authors: El Mammeri, N., Duan, P., Dregni, A.J., Hong, M.
PDB entry 8g57: Structure of nucleosome-bound Sirtuin 6 deacetylase
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; Xenopus laevis; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2023-02-11
Authors: Chio, U.S., Rechiche, O., Bryll, A.R., Zhu, J., Feldman, J.L., Peterson, C.L., Tan, S., Armache, J.-P.
PDB entry 8g58: Tau (297-391) in vitro untwisted fibril
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: SOLID-STATE NMR
Deposited: 2023-02-12
Authors: Duan, P., Dregni, A.J., Mammeri, N.E., Hong, M.
PDB entry 8g59: Cryo-EM structure of the TUG891 bound GPR120-Giq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.64 Å
Deposited: 2023-02-12
Authors: Mao, C., Xiao, P., Tao, X., Qin, J., He, Q., Zhang, C., Yu, X., Zhang, Y., Sun, J.
PDB entry 8g5a: X-31 hemagglutinin in complex with FL-1061 Fab
Classification: VIRAL PROTEIN
Source organism: Influenza A virus; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-02-12
Authors: Windsor, I.W., Thornlow, D., Schmidt, A.G.