LiteFold/PDB huggingface dataset:
PDB entry 4k46: Crystal Structure of Adenylate Kinase from Photobacterium profundum
Classification: TRANSFERASE
Source organism: Photobacterium profundum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2013-04-12
Authors: Cho, Y.-J., Kerns, S.J., Kern, D.
PDB entry 4k47: Structure of the Streptococcus pneumoniae leucyl-tRNA synthetase editing domain bound to a benzoxaborole-AMP adduct
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2013-04-12
Authors: Hu, Q.H., Liu, R.J., Fang, Z.P., Zhang, J., Ding, Y.Y., Tan, M., Wang, M., Pan, W., Zhou, H.C., Wang, E.D.
PDB entry 4k48: Structure of the Streptococcus pneumoniae leucyl-tRNA synthetase editing domain
Classification: LIGASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2013-04-12
Authors: Hu, Q.H., Liu, R.J., Fang, Z.P., Zhang, J., Ding, Y.Y., Tan, M., Wang, M., Pan, W., Zhou, H.C., Wang, E.D.
PDB entry 4k49: X-ray crystal structure of E. coli YdiI complexed with 2,4-dihydroxyphenacyl CoA
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2013-04-12
Authors: Ru, W., Farelli, J.D., Dunaway-Mariano, D., Allen, K.N.
PDB entry 4k4a: X-ray crystal structure of E. coli YdiI complexed with phenacyl-CoA
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2013-04-12
Authors: Ru, W., Farelli, J.D., Dunaway-Mariano, D., Allen, K.N.
PDB entry 4k4b: X-ray crystal structure of E. coli YdiI complexed with undeca-2-one-CoA
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-12
Authors: Ru, W., Farelli, J.D., Dunaway-Mariano, D., Allen, K.N.
PDB entry 4k4c: X-ray crystal structure of E. coli YbdB complexed with phenacyl-CoA
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-04-12
Authors: Ru, W., Farelli, J.D., Dunaway-Mariano, D., Allen, K.N.
PDB entry 4k4d: X-ray crystal structure of E. coli YbdB complexed with 2,4-dihydroxyphenacyl-CoA
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2013-04-12
Authors: Ru, W., Farelli, J.D., Dunaway-Mariano, D., Allen, K.N.
PDB entry 4k4e: Co-crystal structure of tnks1 with compound 52 [N~2-(5-chloro-2-methoxyphenyl)-N-[trans-4-(2-oxo-2,3-dihydro-1H-benzimidazol-1-yl)cyclohexyl]glycinamide]
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-04-12
Authors: Huang, X.
PDB entry 4k4f: Co-crystal structure of TNKS1 with compound 18 [4-[(4S)-5,5-dimethyl-2-oxo-4-phenyl-1,3-oxazolidin-3-yl]-N-(quinolin-8-yl)benzamide]
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-04-12
Authors: Huang, X., Bregman, H., Wilson, C., DiMauro, E., Gunaydin, H.
PDB entry 4k4g: Ternary crystal structures of human DNA POLYMERASE LAMBDA IN COMPLEX WITH DNA AND L-DCTP.
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2013-04-12
Authors: Vyas, R., Suo, Z.
PDB entry 4k4h: Ternary crystal structures of a human DNA POLYMERASE LAMBDA IN COMPLEX WITH DNA AND (-)3TC-TP.
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-12
Authors: Vyas, R., Suo, Z.
PDB entry 4k4i: Ternary crystal structures of a human DNA POLYMERASE LAMBDA IN COMPLEX WITH DNA AND (-)FTC-TP.
Classification: TRANSFERASE/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-04-12
Authors: Vyas, R., Suo, Z.
PDB entry 4k4j: Crystal structure of human Retinoid X Receptor alpha-ligand binding domain complex with 9cUAB30 and the coactivator peptide GRIP-1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-12
Authors: Xia, G., Smith, C.D., Muccio, D.D.
PDB entry 4k4k: Crystal structure of a putative cell adhesion protein (BACUNI_00621) from Bacteroides uniformis ATCC 8492 at 1.67 A resolution
Classification: CELL ADHESION
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2013-04-12
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4k4o: The DNA Gyrase B ATP binding domain of Enterococcus faecalis in complex with a small molecule inhibitor
Classification: ISOMERASE/ISOMERASE INHIBITOR
Source organism: Enterococcus faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2013-04-12
Authors: Bensen, D.C., Akers-Rodriguez, S., Lam, T., Tari, L.W.
PDB entry 4k4p: TL-3 inhibited Trp6Ala HIV Protease
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2013-04-12
Authors: Tiefenbrunn, T., Stout, C.D.
PDB entry 4k4q: TL-3 inhibited Trp6Ala HIV Protease with 3-bromo-2,6-dimethoxybenzoic acid bound in flap site
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-12
Authors: Tiefenbrunn, T., Stout, C.D.
PDB entry 4k4r: TL-3 inhibited Trp6Ala HIV Protease with 1-bromo-2-napthoic acid bound in exosite
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-12
Authors: Tiefenbrunn, T., Stout, C.D.
PDB entry 4k4s: Poliovirus polymerase elongation complex (r3_form)
Classification: Transferase/rna
Source organism: Human poliovirus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-12
Authors: Gong, P., Peersen, O.B.
PDB entry 4k4t: Poliovirus polymerase elongation complex (r4_form)
Classification: transferase/rna
Source organism: Human poliovirus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2013-04-12
Authors: Gong, P., Peersen, O.B.
PDB entry 4k4u: Poliovirus polymerase elongation complex (r5_form)
Classification: Transferase/rna
Source organism: Human poliovirus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2013-04-12
Authors: Gong, P., Peersen, O.B.
PDB entry 4k4v: Poliovirus polymerase elongation complex (r5+1_form)
Classification: transferase/rna
Source organism: Human poliovirus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2013-04-12
Authors: Gong, P., Peersen, O.B.
PDB entry 4k4w: Poliovirus polymerase elongation complex (r5+2_form)
Classification: Transferase/rna
Source organism: Human poliovirus 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2013-04-12
Authors: Gong, P., Peersen, O.B.
PDB entry 4k4x: Coxsackievirus B3 polymerase elongation complex (r2_form), rna
Classification: Transferase/rna
Source organism: Human coxsackievirus B3; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2013-04-12
Authors: Gong, P., Peersen, O.B.
PDB entry 4k4y: Coxsackievirus B3 polymerase elongation complex (r2+1_form)
Classification: Transferase/rna
Source organism: Human coxsackievirus B3; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2013-04-12
Authors: Gong, P., Peersen, O.B.
PDB entry 4k4z: Coxsackievirus B3 polymerase elongation complex (r2_Mg_form)
Classification: Transferase/rna
Source organism: Human coxsackievirus B3; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2013-04-12
Authors: Gong, P., Peersen, O.B.
PDB entry 4k50: Rhinovirus 16 polymerase elongation complex (r1_form)
Classification: Transferase/rna
Source organism: Human rhinovirus A16; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.93 Å
Deposited: 2013-04-12
Authors: Gong, P., Peersen, O.B.
PDB entry 4k51: Crystal Structure of the PCI domain of eIF3a
Classification: BIOSYNTHETIC PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2013-04-12
Authors: Khoshnevis, S., Neumann, P., Ficner, R.
PDB entry 4k55: Structure of the extracellular domain of butyrophilin BTN3A1 in complex with (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate (HMBPP)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2013-04-13
Authors: Kumar, A., Mori, L., De Libero, G.
PDB entry 4k57: Structure of Thermus thermophilus 1-pyrroline-5-carboxylate dehydrogenase R100A mutant
Classification: OXIDOREDUCTASE
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.537 Å
Deposited: 2013-04-13
Authors: Luo, M.L., Singh, R.K., Tanner, J.J.
PDB entry 4k59: Crystal Structure of Pseudomonas Aeruginosa RsmF
Classification: RNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2013-04-14
Authors: Betts, L., Walton, W.G., Redinbo, M.R.
PDB entry 4k5a: Co-crystallization with conformation-specific designed ankyrin repeat proteins explains the conformational flexibility of BCL-W
Classification: APOPTOSIS
Source organism: Bos taurus; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-14
Authors: Schilling, J., Schoeppe, J., Sauer, E., Plueckthun, A.
PDB entry 4k5b: Co-crystallization with conformation-specific designed ankyrin repeat proteins explains the conformational flexibility of BCL-W
Classification: APOPTOSIS
Source organism: Bos taurus; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-04-14
Authors: Schilling, J., Schoeppe, J., Sauer, E., Plueckthun, A.
PDB entry 4k5c: From DARPins to LoopDARPins: Novel LoopDARPin Design Allows the Selection of Low Picomolar Binders in a Single Round of Ribosome Display
Classification: STRUCTURAL PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-04-14
Authors: Schilling, J., Schoeppe, J., Plueckthun, A.
PDB entry 4k5d: Structure of neuronal nitric oxide synthase heme domain in complex with (S)-1,2-bis((2-amino-4-methylpyridin-6-yl)-methoxy)-propan-3-amine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.096 Å
Deposited: 2013-04-14
Authors: Li, H., Poulos, T.L.
PDB entry 4k5e: Structure of neuronal nitric oxide synthase heme domain in complex with (R)-1,2-bis((2-amino-4-methylpyridin-6-yl)-methoxy)-propan-3-amine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2013-04-14
Authors: Li, H., Poulos, T.L.
PDB entry 4k5f: Structure of neuronal nitric oxide synthase heme domain in complex with (S)-1,3-bis((2-amino-4-methylpyridin-6-yl)-methoxy)-butan-4-amine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-14
Authors: Li, H., Poulos, T.L.
PDB entry 4k5g: Structure of neuronal nitric oxide synthase heme domain in complex with ((2S, 3S)-1,3-bis((6-(2,5-dimethyl-1H-pyrrol-1-yl)-4-methylpyridin-2-yl)methoxy)-2-aminobutane
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-04-14
Authors: Li, H., Poulos, T.L.
PDB entry 4k5h: Structure of bovine endothelial nitric oxide synthase heme domain in complex with (S)-1,2-bis((2-amino-4-methylpyridin-6-yl)-methoxy)-propan-3-amine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-04-14
Authors: Chreifi, G., Li, H., Poulos, T.L.
PDB entry 4k5i: Structure of bovine endothelial nitric oxide synthase heme domain in complex with (R)-1,2-bis((2-amino-4-methylpyridin-6-yl)-methoxy)-propan-3-amine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2013-04-14
Authors: Li, H., Poulos, T.L.
PDB entry 4k5j: Structure of bovine endothelial nitric oxide synthase heme domain in complex with (S)-1,3-bis((2-amino-4-methylpyridin-6-yl)-methoxy)-butan-4-amine
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.36 Å
Deposited: 2013-04-14
Authors: Li, H., Poulos, T.L.
PDB entry 4k5k: Structure of bovine endothelial nitric oxide synthase heme domain in complex with ((2S, 3S)-1,3-bis((6-(2,5-dimethyl-1H-pyrrol-1-yl)-4-methylpyridin-2-yl)methoxy)-2-aminobutane
Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-14
Authors: Li, H., Poulos, T.L.
PDB entry 4k5l: Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Plasmodium falciparum FcB1/Columbia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2013-04-14
Authors: McGowan, S.
PDB entry 4k5m: Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Plasmodium falciparum FcB1/Columbia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-04-14
Authors: McGowan, S.
PDB entry 4k5n: Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Plasmodium falciparum FcB1/Columbia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2013-04-15
Authors: McGowan, S.
PDB entry 4k5o: Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Plasmodium falciparum FcB1/Columbia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-15
Authors: McGowan, S.
PDB entry 4k5p: Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Plasmodium falciparum FcB1/Columbia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-04-15
Authors: McGowan, S.
PDB entry 4k5q: Crystal structure of CALB mutant DGLM from Candida antarctica
Classification: HYDROLASE
Source organism: Candida antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2013-04-15
Authors: An, J., Xie, Y., Feng, Y., Wu, G.
PDB entry 4k5r: The 2.0 angstrom crystal structure of MTMOIV, a baeyer-villiger monooxygenase from the mithramycin biosynthetic pathway in streptomyces argillaceus.
Classification: OXIDOREDUCTASE
Source organism: Streptomyces argillaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-15
Authors: Noinaj, N., Bosserman, M.A., Rohr, J., Buchanan, S.K.
PDB entry 4k5s: The crystal structure of premithramycin B in complex with MTMOIV, a baeyer-villiger monooxygenase from the mithramycin biosynthetic pathway in streptomyces argillaceus.
Classification: OXIDOREDUCTASE
Source organism: Streptomyces argillaceus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-15
Authors: Noinaj, N., Bosserman, M.A., Rohr, J., Buchanan, S.K.
PDB entry 4k5u: Recognition of the BG-H Antigen by a Lamprey Variable Lymphocyte Receptor
Classification: IMMUNE SYSTEM
Source organism: Petromyzon marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.698 Å
Deposited: 2013-04-15
Authors: Luo, M., Velikovsky, C.A., Yang, X.B., Mariuzza, R.A.
PDB entry 4k5v: Crystal structure of Staphylococcal nuclease variant Delta+PHS V23T/L36A/V99T at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-04-15
Authors: Caro, J.A., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4k5w: Crystal structure of Staphylococcal nuclease variant V23M/L25F/T62F at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-04-15
Authors: Caro, J.A., Flores, E., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4k5x: Crystal structure of Staphylococcal nuclease variant V23M/L36F at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-04-15
Authors: Caro, J.A., Flores, E., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4k5y: Crystal structure of human corticotropin-releasing factor receptor 1 (CRF1R) in complex with the antagonist CP-376395
Classification: MEMBRANE PROTEIN, RECEPTOR
Source organism: ENTEROBACTERIA PHAGE T4; HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.977 Å
Deposited: 2013-04-15
Authors: Hollenstein, K., Kean, J., Bortolato, A., Cheng, R.K.Y., Dore, A.S., Jazayeri, A., Cooke, R.M., Weir, M., Marshall, F.H.
PDB entry 4k5z: Crystal Structure of Human Chymase in Complex with Fragment Inhibitor 6-chloro-2,3-dihydro-1H-isoindol-1-one
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-15
Authors: Collins, B.K., Padyana, A.K.
PDB entry 4k60: Crystal Structure of Human Chymase in Complex with Fragment 6-bromo-1,3-dihydro-2H-indol-2-one
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-15
Authors: Collins, B.K., Padyana, A.K.
PDB entry 4k61: Crystal structure of a DUF2874 family protein (BACUNI_01296) from Bacteroides uniformis ATCC 8492 at 1.70 A resolution
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Bacteroides uniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2013-04-15
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 4k62: Structure of an avian influenza H5 hemagglutinin from the influenza virus A/Indonesia/5/2005
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.502 Å
Deposited: 2013-04-15
Authors: Zhang, W., Shi, Y., Lu, X., Shu, Y., Qi, J., Gao, G.F.
PDB entry 4k63: Structure of an avian influenza H5 hemagglutinin from the influenza virus complexed with avian receptor analog LSTa
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2013-04-15
Authors: Zhang, W., Shi, Y., Lu, X., Shu, Y., Qi, J., Gao, G.F.
PDB entry 4k64: Structure of an avian influenza H5 hemagglutinin from the influenza virus complexed with human receptor analog LSTc
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.604 Å
Deposited: 2013-04-15
Authors: Zhang, W., Shi, Y., Lu, X., Shu, Y., Qi, J., Gao, G.F.
PDB entry 4k65: Structure of an airborne transmissible avian influenza H5 hemagglutinin mutant from the influenza virus A/Indonesia/5/2005
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2013-04-15
Authors: Zhang, W., Shi, Y., Lu, X., Shu, Y., Qi, J., Gao, G.F.
PDB entry 4k66: Structure of an airborne transmissible avian influenza H5 hemagglutinin mutant from the influenza virus A/Indonesia/5/2005 complexed with avian receptor analog LSTa
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.005 Å
Deposited: 2013-04-15
Authors: Zhang, W., Shi, Y., Lu, X., Shu, Y., Qi, J., Gao, G.F.
PDB entry 4k67: Structure of an airborne transmissible avian influenza H5 hemagglutinin mutant from the influenza virus A/Indonesia/5/2005 complexed with human receptor analog LSTc
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-04-15
Authors: Zhang, W., Shi, Y., Lu, X., Shu, Y., Gao, G.F.
PDB entry 4k68: Structure of a novel GH10 endoxylanase retrieved from sugarcane soil metagenome
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2013-04-15
Authors: Santos, C.R., Polo, C.C., Alvarez, T.M., Paixao, D.A.A., Almeida, R.F., Pereira, I.O., Squina, F.M., Murakami, M.T.
PDB entry 4k69: Crystal Structure of Human Chymase in Complex with Fragment Linked Benzimidazolone Inhibitor: (3S)-3-{3-[(6-bromo-2-oxo-2,3-dihydro-1H-indol-4-yl)methyl]-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl}hexanoic acid
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-15
Authors: Collins, B.K., Padyana, A.K.
PDB entry 4k6a: Revised Crystal Structure of apo-form of Triosephosphate Isomerase (tpiA) from Escherichia coli at 1.8 Angstrom Resolution.
Classification: ISOMERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-15
Authors: Minasov, G., Kuhn, M., Halavaty, A., Shuvalova, L., Dubrovska, I., Winsor, J., Grimshaw, S., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4k6b: Atomic structure of bacteriophage HS1 tail needle knob
Classification: VIRAL PROTEIN
Source organism: unidentified phage
Experimental method: X-RAY DIFFRACTION
Resolution: 1.101 Å
Deposited: 2013-04-15
Authors: Bhardwaj, A., Cingolani, G.
PDB entry 4k6c: X-ray crystal structure of a putative Acetoacyl-CoA reductase from Burkholderia cenocepacia
Classification: OXIDOREDUCTASE
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2013-04-15
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4k6d: Crystal structure of Staphylococcal nuclease variant V23M/T62F at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-04-15
Authors: Caro, J.A., Flores, E., Schlessman, J.L., Heroux, A., Garcia-Moreno E., B.
PDB entry 4k6e: Crystal structure of Saccharomyces cerevisiae Dcp2 Nudix domain in complex with Mg
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-15
Authors: Aglietti, R.A., Floor, S.N., Gross, J.D.
PDB entry 4k6f: X-ray crystal structure of a putative Acetoacetyl-CoA reductase from Burkholderia cenocepacia bound to the co-factor NADP
Classification: OXIDOREDUCTASE
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-15
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4k6g: Crystal structure of CALB from Candida antarctica
Classification: HYDROLASE
Source organism: Candida antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-15
Authors: An, J., Xie, Y., Feng, Y., Wu, G.
PDB entry 4k6h: Crystal structure of CALB mutant L278M from Candida antarctica
Classification: HYDROLASE
Source organism: Candida antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-15
Authors: An, J., Xie, Y., Feng, Y., Wu, G.
PDB entry 4k6i: Crystal structure of human retinoid X receptor alpha-ligand binding domain complex with Targretin and the coactivator peptide GRIP-1
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-15
Authors: Xia, G., Smith, C.D., Muccio, D.D.
PDB entry 4k6j: Human cohesin inhibitor WapL
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6205 Å
Deposited: 2013-04-16
Authors: Tomchick, D.R., Yu, H., Ouyang, Z.
PDB entry 4k6k: Crystal structure of CALB mutant D223G from Candida antarctica
Classification: HYDROLASE
Source organism: Candida antarctica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-16
Authors: An, J., Xie, Y., Feng, Y., Wu, G.
PDB entry 4k6l: Structure of Typhoid Toxin
Classification: TOXIN
Source organism: Salmonella enterica subsp. enterica serovar Typhi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.393 Å
Deposited: 2013-04-16
Authors: Gao, X., Song, J., Galan, J.
PDB entry 4k6m: Crystal Structure of the full-length Japanese encephalitis virus NS5
Classification: TRANSFERASE
Source organism: Japanese encephalitis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2013-04-16
Authors: Lu, G., Gong, P.
PDB entry 4k6n: Crystal structure of yeast 4-amino-4-deoxychorismate lyase
Classification: LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-16
Authors: Dai, Y.-N., Chi, C.-B., Zhou, K., Cheng, W., Jiang, Y.-L., Ren, Y.-M., Chen, Y., Zhou, C.-Z.
PDB entry 4k6o: X-ray structure uridine phosphorylase from Vibrio cholerae in complex with 6-methyluracil at 1.17 A resolution
Classification: TRANSFERASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2013-04-16
Authors: Prokofev, I.I., Lashkov, A.A., Gabdoulkhakov, A.G., Betzel, C., Mikhailov, A.M.
PDB entry 4k6r: Crystal structure of GlmU in complex with ATP
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2013-04-16
Authors: Vithani, N., Prakash, B.
PDB entry 4k6t: Crystal structure of Ad37 fiber knob in complex with trivalent sialic acid inhibitor ME0385
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 37
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-16
Authors: Stehle, T., Bauer, J.
PDB entry 4k6u: Crystal structure of Ad37 fiber knob in complex with trivalent sialic acid inhibitor ME0386
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 37
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-16
Authors: Stehle, T., Bauer, J.
PDB entry 4k6v: Crystal structure of Ad37 fiber knob in complex with trivalent sialic acid inhibitor ME0407
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 37
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-16
Authors: Stehle, T., Bauer, J.
PDB entry 4k6w: Crystal structure of Ad37 fiber knob in complex with trivalent sialic acid inhibitor ME0408
Classification: VIRAL PROTEIN
Source organism: Human adenovirus 37
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-16
Authors: Stehle, T., Bauer, J.
PDB entry 4k6x: Crystal structure of disulfide oxidoreductase from Mycobacterium tuberculosis
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.972 Å
Deposited: 2013-04-16
Authors: Premkumar, L., Martin, J.L.
PDB entry 4k6y: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36-Q (ANSRWQTSII)
Classification: PEPTIDE BINDING PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2013-04-16
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4k6z: The Jak1 kinase domain in complex with compound 37
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2013-04-16
Authors: Fong, R., Lupardus, P.J.
PDB entry 4k70: Crystal Structure of N-terminal half of Pseudorabiesvirus UL37 protein
Classification: VIRAL PROTEIN
Source organism: Suid herpesvirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-16
Authors: Pitts, J.D., Heldwein, E.E.
PDB entry 4k71: Crystal structure of a high affinity Human Serum Albumin variant bound to the Neonatal Fc Receptor
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-16
Authors: Schmidt, M.M., Townson, S.A., Andreucci, A., Dombrowski, C., Erbe, D.V., King, B., Kovalchin, J.T., Masci, A., Murillo, A., Schirmer, E.B., Furfine, E.S., Barnes, T.M.
PDB entry 4k72: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36-VQD (ANSRVQDSII)
Classification: PEPTIDE BINDING PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-16
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4k73: X-ray crystal structure of an L,D-transpeptidase from Mycobacterium tuberculosis H37Rv
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2013-04-16
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4k74: The UmuC subunit of the E. coli DNA polymerase V shows a unique interaction with the beta-clamp processivity factor.
Classification: DNA BINDING PROTEIN/TRANSFERASE
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2013-04-16
Authors: Patoli, A.A., Winter, J.A., Bunting, K.A.
PDB entry 4k75: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36-QDTRL (ANSRWQDTRL)
Classification: PEPTIDE BINDING PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-16
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4k76: CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36-TRL (ANSRWPTTRL)
Classification: PEPTIDE BINDING PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-04-16
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4k77: JAK1 kinase (JH1 domain) in complex with compound 6
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-16
Authors: Eigenbrot, C., Shia, S.
PDB entry 4k78: CFTR Associated Ligand (CAL) E317A PDZ domain bound to peptide iCAL36-QDTRL (ANSRWQDTRL)
Classification: PEPTIDE BINDING PROTEIN/PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-16
Authors: Amacher, J.F., Madden, D.R.
PDB entry 4k79: Recognition of the Thomsen-Friedenreich Antigen by a Lamprey Variable Lymphocyte Receptor
Classification: IMMUNE SYSTEM
Source organism: Petromyzon marinus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-16
Authors: Luo, M., Velikovsky, C.A., Yang, X.B., Mariuzza, R.A.
PDB entry 4k7a: Crystal structure of the androgen receptor ligand binding domain in complex with minoxidil
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2013-04-16
Authors: Liu, J.S., Hsu, C.L., Wu, W.G.
PDB entry 4k7b: Crystal structure of Extrinsic protein in photosystem II
Classification: PHOTOSYNTHESIS
Source organism: Chaetoceros gracilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-04-16
Authors: Nagao, R., Suga, M., Niikura, A., Okumura, A., Koua, F.H.M., Suzuki, T., Tomo, T., Enami, I., Shen, J.R.
PDB entry 4k7c: Crystal structure of pepw from lactobacillus rhamnosis hn001 (dr20) determined as the selenomet derivative
Classification: HYDROLASE
Source organism: Lactobacillus rhamnosus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2013-04-16
Authors: Webby, C., Knapp, K.M., Anderson, B.F., Norris, G.E.
PDB entry 4k7d: Crystal Structure of Parkin C-terminal RING domains
Classification: LIGASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-04-17
Authors: Sauve, V., Trempe, J.-F., Menade, M., Gehring, K.
PDB entry 4k7e: Crystal structure of Junin virus nucleoprotein
Classification: VIRAL PROTEIN
Source organism: Junin virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2013-04-17
Authors: Zhang, Y.J., Li, L., Liu, X., Dong, S.S., Wang, W.M., Huo, T., Rao, Z.H., Yang, C.
PDB entry 4k7f: Newly identified epitope V60 from HBV core protein complexed with HLA-A*0201
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-17
Authors: Meng, S.D., Zhang, Y., Wu, Y., Qi, J.X.
PDB entry 4k7g: Crystal structure of a 3-hydroxyproline dehydratse from agrobacterium vitis, target efi-506470, with bound pyrrole 2-carboxylate, ordered active site
Classification: ISOMERASE
Source organism: Agrobacterium vitis S4
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-17
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4k7h: Major capsid protein P1 of the Pseudomonas phage phi6
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage phi6
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5964 Å
Deposited: 2013-04-17
Authors: Boura, E., Nemecek, D., Plevka, P., Steven, C.A., Hurley, J.H.
PDB entry 4k7i: HUMAN PEROXIREDOXIN 5 with a fragment
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2013-04-17
Authors: Guichou, J.F.
PDB entry 4k7j: Peptidoglycan O-acetylesterase in action, 5 min
Classification: HYDROLASE
Source organism: Neisseria meningitidis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.968 Å
Deposited: 2013-04-17
Authors: Williams, A.H., Gomperts Boneca, I.
PDB entry 4k7k: Crystal structures of CusC review conformational changes accompanying folding and transmembrane channel formation
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.53 Å
Deposited: 2013-04-17
Authors: Su, C.-C., Lei, H.-T.
PDB entry 4k7l: Crystal structure of RNase S variant (K7C/Q11C)
Classification: HYDROLASE
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2013-04-17
Authors: Genz, M., Straeter, N.
PDB entry 4k7m: Crystal structure of RNase S variant (K7C/Q11C) with bound mercury ions
Classification: HYDROLASE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2013-04-17
Authors: Genz, M., Straeter, N.
PDB entry 4k7n: HUMAN PEROXIREDOXIN 5 with a fragment
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2013-04-17
Authors: Guichou, J.F.
PDB entry 4k7o: HUMAN PEROXIREDOXIN 5 with a fragment
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2013-04-17
Authors: Guichou, J.F.
PDB entry 4k7p: Generation and Characterization of a Unique Reagent that Recognizes a Panel of Recombinant Human Monoclonal Antibody Therapeutics in the Presence of Endogenous Human IgG
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2013-04-17
Authors: Eigenbrot, C., Shia, S.
PDB entry 4k7q: Crystal Structure of AcrB Complexed with Linezolid at 3.5 Resolution
Classification: MEMBRANE PROTEIN/ANTIBIOTIC
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2013-04-17
Authors: Hung, L.W., Kim, H.B., Murakami, S., Gupta, G., Kim, C.Y., Terwilliger, T.C.
PDB entry 4k7r: Crystal structures of CusC review conformational changes accompanying folding and transmembrane channel formation
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.094 Å
Deposited: 2013-04-17
Authors: Su, C.-C., Lei, H.-T., Bolla, J.R., Yu, E.W.
PDB entry 4k7s: Crystal structure of Zn2-hUb (human ubiquitin) adduct from a solution 35 mM zinc acetate/1.3 mM hUb
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2013-04-17
Authors: Fermani, S., Falini, G., Calvaresi, M., Bottoni, A., Arnesano, F., Natile, G.
PDB entry 4k7t: Structure of the ternary complex of bacitracin, zinc, and geranyl-pyrophosphate
Classification: ANTIBIOTIC
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2013-04-17
Authors: Economou, N.J., Loll, P.J.
PDB entry 4k7u: Crystal structure of Zn2.3-hUb (human ubiquitin) adduct from a solution 70 mM zinc acetate/1.3 mM hUb
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2013-04-17
Authors: Fermani, S., Falini, G., Calvaresi, M., Bottoni, A., Arnesano, F., Natile, G.
PDB entry 4k7v: OYE1-W116A complexed with (R)-carvone
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces pastorianus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.516 Å
Deposited: 2013-04-17
Authors: Sullivan, B., Pompeu, Y.A., Stewart, J.D.
PDB entry 4k7w: Crystal structure of Zn3-hUb(human ubiquitin) adduct from a solution 100 mM zinc acetate/1.3 mM hUb
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2013-04-17
Authors: Fermani, S., Falini, G., Calvaresi, M., Bottoni, A., Arnesano, F., Natile, G.
PDB entry 4k7x: Crystal structure of a 4-hydroxyproline epimerase from burkholderia multivorans, target efi-506479, with bound phosphate, closed domains
Classification: LYASE
Source organism: Burkholderia multivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-04-17
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4k7y: Oye1-w116t
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces pastorianus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.199 Å
Deposited: 2013-04-17
Authors: Sullivan, B., Pompeu, Y.A., Stewart, J.D.
PDB entry 4k7z: Crystal structure of the C136(42)A/C141(47)A double mutant of Tn501 MerA in complex with NADP and Hg2+
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-17
Authors: Dong, A., Falkowaski, M., Malone, M., Miller, S.M., Pai, E.F.
PDB entry 4k80: Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 2:0 ceramide-1-phosphate (2:0-C1P)
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.051 Å
Deposited: 2013-04-17
Authors: Simanshu, D.K., Brown, R.E., Patel, D.J.
PDB entry 4k81: Crystal structure of the Grb14 RA and PH domains in complex with GTP-loaded H-Ras
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-17
Authors: Qamra, R., Hubbard, S.R.
PDB entry 4k82: Crystal structure of lv-ranaspumin (Lv-RSN-1) from the foam nest of Leptodactylus vastus, monoclinic crystal form
Classification: STRUCTURAL PROTEIN
Source organism: Leptodactylus vastus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2013-04-17
Authors: Hissa, D.C., Bezerra, G.A., Melo, V.M.M., Gruber, K.
PDB entry 4k83: Crystal structure of lv-ranaspumin (Lv-RSN-1) from the foam nest of Leptodactylus vastus, orthorhombic crystal form
Classification: STRUCTURAL PROTEIN
Source organism: Leptodactylus vastus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2013-04-17
Authors: Hissa, D.C., Bezerra, G.A., Melo, V.M.M., Gruber, K.
PDB entry 4k84: Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 16:0 ceramide-1-phosphate (16:0-C1P)
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.897 Å
Deposited: 2013-04-17
Authors: Simanshu, D.K., Brown, R.E., Patel, D.J.
PDB entry 4k85: Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 12:0 Ceramide-1-Phosphate (12:0-C1P)
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2013-04-17
Authors: Simanshu, D.K., Brown, R.E., Patel, D.J.
PDB entry 4k86: Crystal structure of human prolyl-tRNA synthetase (apo form)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2013-04-18
Authors: Hwang, K.Y., Son, J.H., Lee, E.H.
PDB entry 4k87: Crystal structure of human prolyl-tRNA synthetase (substrate bound form)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.301 Å
Deposited: 2013-04-18
Authors: Hwang, K.Y., Son, J.H., Lee, E.H.
PDB entry 4k88: Crystal structure of human prolyl-tRNA synthetase (halofuginone bound form)
Classification: LIGASE/LIGASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.619 Å
Deposited: 2013-04-18
Authors: Hwang, K.Y., Son, J.H., Lee, E.H.
PDB entry 4k89: Crystal structure of Pseudomonas aeruginosa strain K solvent tolerant elastase
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.39 Å
Deposited: 2013-04-18
Authors: Ali, M.S.M., Said, Z.S.A.M., Rahman, R.N.Z.R.A., Basri, M., Salleh, A.B.
PDB entry 4k8a: Fragment-based discovery of Focal Adhesion Kinase Inhibitors
Classification: Transferase/Transferase Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.91 Å
Deposited: 2013-04-18
Authors: Graedler, U., Bomke, J., Musil, D., Dresing, V., Lehmann, M., Hoelzemann, G., Esdar, C., Krier, M., Heinrich, T.
PDB entry 4k8b: Crystal structure of HCV NS3/4A protease complexed with inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Hepatitis C virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2013-04-18
Authors: Nar, H.
PDB entry 4k8c: Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with ADP
Classification: TRANSFERASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2013-04-18
Authors: Malashkevich, V.N., Bhosle, R., Toro, R., Hillerich, B., Gizzi, A., Garforth, S., Kar, A., Chan, M.K., Lafluer, J., Patel, H., Matikainen, B., Chamala, S., Lim, S., Celikgil, A., Villegas, G., Evans, B., Love, J., Fiser, A., Khafizov, K., Seidel, R., Bonanno, J.B., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4k8d: Crystal structure of the C558(464)A/C559(465)A double mutant of Tn501 MerA in complex with NADPH and Hg2+
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2013-04-18
Authors: Dong, A., Falkowski, M., Malone, M., Miller, S.M., Pai, E.F.
PDB entry 4k8e: OYE1-W116V complexed with the aromatic product of (R)-carvone dismutation
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces pastorianus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.269 Å
Deposited: 2013-04-18
Authors: Sullivan, B., Pompeu, Y.A., Stewart, J.D.
PDB entry 4k8f: Structure of the heme domain of CooA from Rhodospirillum rubrum
Classification: TRANSCRIPTION
Source organism: Rhodospirillum rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2013-04-18
Authors: Kuchinskas, M., Li, H., Poulos, T.L.
PDB entry 4k8g: Crystal structure of D-Mannonate dehydratase from Novosphingobium aromaticivorans mutant (V161A, R163A, K165G, L166A, Y167G, Y168A, E169G)
Classification: METAL BINDING PROTEIN
Source organism: Novosphingobium aromaticivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2013-04-18
Authors: Lukk, T., Wichelecki, D., Gerlt, J.A., Nair, S.K.
PDB entry 4k8h: OYE1-W116V complexed with (R)-carvone
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces pastorianus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2013-04-18
Authors: Sullivan, B., Pompeu, Y.A., Stewart, J.D.
PDB entry 4k8i: Crystal Structure of Staphylococcal Nuclease mutant I92V/V99L
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2013-04-18
Authors: Sanders, J.M., Latimer, E.C., Roeser, J.R., Janowska, K., Sakon, J., Stites, W.E.
PDB entry 4k8j: Crystal Structure of Staphylococcal nuclease mutant V23L/V66I
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2013-04-18
Authors: Sanders, J.M., Gill, E., Roeser, J.R., Janowska, K., Sakon, J., Stites, W.E.
PDB entry 4k8k: Crystal structure of probable sugar kinase protein from Rhizobium etli CFN 42 complexed with 1-(4-methoxyphenyl)-1-cyclopropane and 2-aminoperimidine
Classification: TRANSFERASE
Source organism: Rhizobium etli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2013-04-18
Authors: Malashkevich, V.N., Bhosle, R., Toro, R., Hillerich, B., Gizzi, A., Garforth, S., Kar, A., Chan, M.K., Lafluer, J., Patel, H., Matikainen, B., Chamala, S., Lim, S., Celikgil, A., Villegas, G., Evans, B., Love, J., Fiser, A., Khafizov, K., Seidel, R., Bonanno, J.B., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)
PDB entry 4k8l: Crystal structure of a putative 4-hydroxyproline epimerase/3-hydroxyproline dehydratse from the soil bacterium ochrobacterium anthropi, target efi-506495, disordered loops
Classification: ISOMERASE
Source organism: Ochrobactrum anthropi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2013-04-18
Authors: Vetting, M.W., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Washington, E., Scott Glen, A., Chowdhury, S., Evens, B., Hammonds, J., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4k8m: High resolution structure of M.tb NRDH
Classification: ELECTRON TRANSPORT
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.87 Å
Deposited: 2013-04-18
Authors: Phulera, S., Mande, S.C.
PDB entry 4k8n: Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 18:1 Ceramide-1-Phosphate (18:1-C1P)
Classification: LIPID TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.102 Å
Deposited: 2013-04-18
Authors: Simanshu, D.K., Brown, R.E., Patel, D.J.
PDB entry 4k8o: CRYSTAL STRUCTURE OF THE ATPASE DOMAIN OF TAP1 WITH ATP (D645N, D651A MUTANT)
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2013-04-18
Authors: Vakkasoglu, A.S., Grossmann, N., Hulpke, S., Abele, R., Tampe, R., Gaudet, R.