LiteFold/PDB huggingface dataset:
PDB entry 9qd4: Crystal structure of the neurotensin receptor 1 in complex with the small-molecule full agonist cp30a
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.112 Å
Deposited: 2025-03-06
Authors: Deluigi, M., Hilge, M., Plueckthun, A.
PDB entry 9qd5: Crystal structure of SARS-CoV-2 main protease in complex with RS222C
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.044 Å
Deposited: 2025-03-06
Authors: Oerlemans, R., van der Straat, R., Marples, P., Koekemoer, L., Domling, A., Groves, M.R.
PDB entry 9qd6: High resolution structure of the artificially maturated [FeFe]-hydrogenase from Nitratidesulfovibrio vulgaris str. Hildenborough
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2025-03-06
Authors: Bikbaev, K., Harand, T., Scheuenstuhl, L., Span, I.
PDB entry 9qd7: The FK1 domain of FKBP51 in complex with the macrocyclic SAFit analog 15a
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.264 Å
Deposited: 2025-03-06
Authors: Meyners, C., Brudy, C., Hausch, F.
PDB entry 9qd8: The FK1 domain of FKBP51 in complex with the macrocyclic SAFit analog 29a
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2025-03-06
Authors: Meyners, C., Brudy, C., Hausch, F.
PDB entry 9qd9: The FK1 domain of FKBP51 in complex with the macrocyclic SAFit analog 29c
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2025-03-06
Authors: Meyners, C., Brudy, C., Hausch, F.
PDB entry 9qda: The FK1 domain of FKBP51 in complex with the macrocyclic SAFit analog 29b
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-03-06
Authors: Meyners, C., Brudy, C., Hausch, F.
PDB entry 9qdb: The FK1 domain of FKBP51 in complex with the macrocyclic SAFit analog 29d
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2025-03-06
Authors: Meyners, C., Brudy, C., Hausch, F.
PDB entry 9qdc: Nitratidesulfovibrio vulgaris [FeFe]-hydrogenase crystallized in the sodium formate buffer at pH 4.6
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.491 Å
Deposited: 2025-03-06
Authors: Bikbaev, K., Span, I.
PDB entry 9qdd: Nitratidesulfovibrio vulgaris [FeFe]-hydrogenase crystallized in the sodium acetate buffer at pH 5.3
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.201 Å
Deposited: 2025-03-06
Authors: Bikbaev, K., Span, I.
PDB entry 9qde: Crystal structure of the non-glycosylated polyester hydrolase Leipzig 7 (PHL7) mut3 variant expressed in Pichia pastoris (P_PHL7mut3_ng)
Classification: HYDROLASE
Source organism: compost metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2025-03-06
Authors: Useini, A., Strater, N., Striedner, G., Sonnendecker, C.
PDB entry 9qdf: Yeast 20S proteasome mutant: beta1_G128V (b1-propeptide deleted) in complex with Bortezomib
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-03-06
Authors: Huber, E.M., Heinemeyer, W., Groll, M.
PDB entry 9qdg: Nitratidesulfovibrio vulgaris [FeFe] hydrogenase crystallized in the sodium propionate buffer at pH 5.0
Classification: OXIDOREDUCTASE
Source organism: Nitratidesulfovibrio vulgaris str. Hildenborough
Experimental method: X-RAY DIFFRACTION
Resolution: 1.02 Å
Deposited: 2025-03-06
Authors: Bikbaev, K., Span, I.
PDB entry 9qdh: Crystal structure of IgA protease (323-878) from Thomasclavelia ramosa
Classification: HYDROLASE
Source organism: Thomasclavelia ramosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-03-06
Authors: Marquez-Monino, M.A., Martinez Gascuena, A., Aguillo-Urarte, M., Manzanares-Gomez, A., Trastoy, B.
PDB entry 9qdi: Crystal structure of BF3526 peptidase from Bacteroides fragilis in complex with a peptide
Classification: HYDROLASE
Source organism: Bacteroides fragilis NCTC 9343; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2025-03-06
Authors: Martinez Gascuena, A., Marquez-Monino, M.A., Manzanares-Gomez, A., Aguillo-Urarte, M., Trastoy, B.
PDB entry 9qdj: CRYSTAL STRUCTURE OF LYSYL-TRNA SYNTHETASE FROM Mycobacterium tuberculosis COMPLEXED WITH L-LYSINE AND INHIBITOR DDD018870911
Classification: LIGASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.597 Å
Deposited: 2025-03-06
Authors: Dawson, A., Cleghorn, L.A.T., Davis, S.H.
PDB entry 9qdk: Trypanosoma brucei PTR1 in complex with fragment L330 and compound F46
Classification: OXIDOREDUCTASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-03-06
Authors: Landi, G., Mangani, S., Pozzi, C.
PDB entry 9qdl: CRYO-EM STRUCTURE OF THE YEAST RESPIRATORY COMPLEX II
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae W303
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2025-03-06
Authors: Pinotsis, N., Marechal, A., Berry, E.A., Shu, C.
PDB entry 9qdm: CRYO-EM STRUCTURE OF THE YEAST RESPIRATORY COMPLEX II WITH THE INHIBITOR BIXAFEN
Classification: OXIDOREDUCTASE
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae W303
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-03-06
Authors: Pinotsis, N., Marechal, A., Berry, E.A., Shu, C.
PDB entry 9qdn: GluA4 in complex with TARP-2, resting state I, structure of TMD/LBD
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2025-03-06
Authors: Vega-Gutierrez, C., Herguedas, B.
PDB entry 9qdo: Crystal structure of the aromatic oligoamide foldamer binder Nanofitin C10 fused to a coiled-coil domain
Classification: DE NOVO PROTEIN
Source organism: Sulfolobus acidocaldarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2025-03-06
Authors: Sigl, J.C., Morozov, V., Huc, I.
PDB entry 9qdp: De novo designed enzyme for Morita-Baylis-Hillman reaction MBH2
Classification: DE NOVO PROTEIN
Source organism: Synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2025-03-06
Authors: Tripp, A., Stoll, D., Oberdorfer, G., Fischer, C., Kaltenbrunner, S.
PDB entry 9qdq: Cryo-EM structure of Upf1-Nmd4-Ebs1 in complex with RNA
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2025-03-06
Authors: Iermak, I., Wilson Eisele, N.R., Kurscheidt, K., Loukeri, M.J., Basquin, J., Bonneau, F., Langer, L.M., Keidel, A., Conti, E.
PDB entry 9qdr: Structure of Staphylococcus aureus MarR-type repressor MhqR
Classification: DNA BINDING PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2025-03-06
Authors: Weiland, P., Kiontke, S., Bange, G.
PDB entry 9qds: Yeast 20S proteasome mutant: beta1_G128V (b1-propeptide deleted) in complex with Carfilzomib
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2025-03-06
Authors: Huber, E.M., Heinemeyer, W., Groll, M.
PDB entry 9qdt: Cytochrome c peroxidase YhjA
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.572 Å
Deposited: 2025-03-06
Authors: Einsle, O., Wuest, A.
PDB entry 9qdu: KEAP1 complexed to cyclic peptide 30
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-03-06
Authors: Ji, X., Lau, K.
PDB entry 9qdv: Crystal structure of the polyester hydrolase Leipzig 7 (PHL7) mut3 variant expressed in E. coli (E_PHL7mut3)
Classification: HYDROLASE
Source organism: compost metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 0.89 Å
Deposited: 2025-03-07
Authors: Useini, A., Strater, N., Striedner, G., Sonnendecker, C.
PDB entry 9qdw: Crystal structure of human PLA2G5 in complex with a SMOL inhibitor (compound 1)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2025-03-07
Authors: Fearon, D., Puetter, V., Friberg, A., Braeuer, N., Barker, J.J., Sacher, F.
PDB entry 9qdx: GID4 in complex with Compound 1
Classification: LIGASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2025-03-07
Authors: Wisniewski, J., Gorecka-Minakowska, K.M., Klejnot, M., Pastok, M.W., Skowron, A.N., Walczak, M.J.
PDB entry 9qdy: GID4 in complex with Compound 9
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-03-07
Authors: Skowron, A.N., Gorecka-Minakowska, K.M., Klejnot, M., Pastok, M.W., Wisniewski, J., Walczak, M.J.
PDB entry 9qdz: GID4 in complex with Compound 14
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2025-03-07
Authors: Pastok, M.W., Gorecka-Minakowska, K.M., Klejnot, M., Skowron, A.N., Wisniewski, J., Walczak, M.J.
PDB entry 9qe0: Neobacillus vireti Wadjet-II JetABC dimer
Classification: DNA BINDING PROTEIN
Source organism: Neobacillus vireti LMG 21834
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.71 Å
Deposited: 2025-03-07
Authors: Roisne-Hamelin, F., Gruber, S.
PDB entry 9qe1: Neobacillus vireti Wadjet-II JetABC monomer
Classification: DNA BINDING PROTEIN
Source organism: Neobacillus vireti LMG 21834
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-03-07
Authors: Roisne-Hamelin, F., Gruber, S.
PDB entry 9qe2: Mouse otoferlin (216-1931) in complex with an MSP2N2 lipid nanodisc (30 mol% DOPS, 10 mol% PI(4,5)P2)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2025-03-07
Authors: Cretu, C., Moser, T.
PDB entry 9qe3: Structure of native leukocyte myeloperoxidase in complex with a truncated version of the Staphylococcal Peroxidase Inhibitor SPIN and selenocyanate at pH 5.5
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2025-03-07
Authors: Leitgeb, U., Pfanzagl, V.
PDB entry 9qe4: VCB in complex with VHL-binding compound 114
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2025-03-07
Authors: Braun, M.B., Dierlamm, N., Hartmann, M.D.
PDB entry 9qe5: VCB in complex with VHL-binding compound 82
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2025-03-07
Authors: Braun, M.B., Dierlamm, N., Hartmann, M.D.
PDB entry 9qe7: Membrane-distal part of extracellular domain of the Fap2 autotransporter adhesin from Fusobacterium nucleatum ATCC23726
Classification: CELL ADHESION
Source organism: Fusobacterium nucleatum
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2025-03-07
Authors: Schoepf, F., Marongiu, G.L., Milaj, K., Sprink, T., Kikhney, J., Moter, A., Roderer, D.
PDB entry 9qe9: Catalytic domain of Streptomyces Antiquus Insecticidal Protein (SAIP) from Streptomyces klenkii
Classification: TOXIN
Source organism: Streptomyces klenkii
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2025-03-07
Authors: Krc, A., Stenmark, P.
PDB entry 9qea: CRYSTAL STRUCTURE OF LYSYL-TRNA SYNTHETASE FROM Mycobacterium tuberculosis COMPLEXED WITH L-LYSINE AND INHIBITOR DDD01839469
Classification: LIGASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-03-07
Authors: Dawson, A., Cleghorn, L.A.T., Davis, S.H.
PDB entry 9qec: Cryo-EM structure of the XPF-ERCC1-XPA complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-03-08
Authors: Feng, J., Cronin, N.B., Greber, B.J.
PDB entry 9qed: Cryo-EM structure of the XPF-ERCC1-SLX4(330-555)-SLX4IP complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-03-09
Authors: Feng, J., Cronin, N.B., Greber, B.J.
PDB entry 9qee: Cryo-EM structure of a DNA-bound XPF-ERCC1-SLX4(330-555)-SLX4IP complex
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-03-09
Authors: Feng, J., Matthews-Palmer, T., Greber, B.J.
PDB entry 9qef: Respiratory supercomplex from Mycobacterium smegmatis with decylubiquinone
Classification: ELECTRON TRANSPORT
Source organism: Mycolicibacterium smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2025-03-09
Authors: Kovalova, T., Krol, S., Brzezinski, P., Hogbom, M.
PDB entry 9qeg: Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain ""KES34"" in complex with solithromycin
Classification: RIBOSOME
Source organism: Staphylococcus aureus subsp. aureus USA300
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.21 Å
Deposited: 2025-03-10
Authors: Rivalta, A., Yonath, A.
PDB entry 9qeh: Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain ""MNY196"" in complex with solithromycin
Classification: RIBOSOME
Source organism: Staphylococcus aureus subsp. aureus USA300
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.08 Å
Deposited: 2025-03-10
Authors: Rivalta, A., Yonath, A.
PDB entry 9qei: CRYSTAL STRUCTURE OF LYSYL-TRNA SYNTHETASE FROM Mycobacterium tuberculosis COMPLEXED WITH L-LYSINE AND INHIBITOR DDD01866774
Classification: LIGASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2025-03-10
Authors: Dawson, A., Cleghorn, L.A.T., Davis, S.H.
PDB entry 9qej: Cryo-EM structure of the Importin beta:Importin7:Histone H1.0 complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.2 Å
Deposited: 2025-03-10
Authors: Neumann, P.
PDB entry 9qek: Structure of Human ROS1 Kinase Domain Harboring the G2032R Solvent-front Mutation in Complex with Zidesamtinib (NVL-520)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.205 Å
Deposited: 2025-03-10
Authors: Tangpeerachaikul, A., Mente, S., Magrino, J., Gu, F., Horan, J.C., Pelish, H.E.
PDB entry 9qel: Crystal structure of YTHDF2 in complex with compound 4 (AI-DF2-13)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2025-03-10
Authors: Nai, F., Invernizzi, A., Caflisch, A.
PDB entry 9qem: Crystal structure of YTHDF2 in complex with compound 3 (AI-DF2-11)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.26 Å
Deposited: 2025-03-10
Authors: Nai, F., Invernizzi, A., Caflisch, A.
PDB entry 9qen: Cryo-EM structure of human O-GlcNAcase
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.08 Å
Deposited: 2025-03-10
Authors: Basse Hansen, S., Bartual, S.G., Yuan, H., Raimi, O.G., Gorelik, A., Ferenbach, A.T., Lytje, K., Pedersen, J.S., Drace, T., Boesen, T., van Aalten, D.M.F.
PDB entry 9qeo: Crystal structure of YTHDF2 in complex with compound 5 (AI-DF2-36)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2025-03-10
Authors: Nai, F., Invernizzi, A., Caflisch, A.
PDB entry 9qep: Cryo-EM structure of O-GlcNAcase from Trichoplax Adhaerens
Classification: HYDROLASE
Source organism: Trichoplax adhaerens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2025-03-10
Authors: Basse Hansen, S., Bartual, S.G., Yuan, H., Raimi, O.G., Gorelik, A., Ferenbach, A.T., Lytje, K., Pedersen, J.S., Drace, T., Boesen, T., van Aalten, D.M.F.
PDB entry 9qeq: Structure of the transcribing Pol II-DSIF-SPT6-U1 snRNP complex
Classification: SPLICING
Source organism: Homo sapiens; Sus scrofa domesticus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2025-03-10
Authors: Zhang, S.
PDB entry 9qeu: Structure of CHIP E3 ubiquitin ligase TPR domain in complex with compound 1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.353 Å
Deposited: 2025-03-11
Authors: Breed, J.
PDB entry 9qev: A native carbonic anhydrase from Caloramator australiacus
Classification: METAL BINDING PROTEIN
Source organism: Caloramator australicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2025-03-11
Authors: Papageorgiou, A.C., Mohsin, I.
PDB entry 9qew: Cryo-EM structure of the undecorated actin filament in the ADP-Pi state.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.18 Å
Deposited: 2025-03-11
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qex: Structure of native leukocyte myeloperoxidase in complex with a truncated version of the Staphylococcal Peroxidase Inhibitor SPIN and thiocyanate at pH 7.5
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.903 Å
Deposited: 2025-03-11
Authors: Leitgeb, U., Pfanzagl, V.
PDB entry 9qey: Cryo-EM structure of the actin filament bound by a single Coronin-1B molecule.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2025-03-11
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qez: Carbonic anhydrase mutant
Classification: METAL BINDING PROTEIN
Source organism: Caloramator australicus RC3; unidentified
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-03-11
Authors: Mohsin, I., Papageorgiou, A.C.
PDB entry 9qf0: Cryo-EM structure of the mportin7:Histone H1.0 complex
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.5 Å
Deposited: 2025-03-11
Authors: Neumann, P., Dickmanns, A.
PDB entry 9qf1: Structure of CHIP E3 ubiquitin ligase TPR domain in complex with compound 2
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.511 Å
Deposited: 2025-03-11
Authors: Breed, J.
PDB entry 9qf2: Cryo-EM structure of the fully Coronin-1B-decorated actin filament in the ADP state.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.42 Å
Deposited: 2025-03-11
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qf3: Structure of the GH13 domain of Ruminococcus bromii Amy4
Classification: HYDROLASE
Source organism: Ruminococcus bromii L2-63
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2025-03-11
Authors: Wimmer, B.H., Medalia, O.
PDB entry 9qf4: Structure of P. furiosus 70S ribosome grown at 95 degC
Classification: RIBOSOME
Source organism: Pyrococcus furiosus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2025-03-11
Authors: Matzov, D., Georgeson, G., Westhof, E., Schwartz, S., Shalev-Benami, M.
PDB entry 9qf5: Structure of P. furiosus 70S ribosome grown at 102deg
Classification: RIBOSOME
Source organism: Pyrococcus furiosus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2025-03-11
Authors: Matzov, D., Georgeson, J., Westhof, E., Schwartz, S., Shalev-Benami, M.
PDB entry 9qf6: Structure of P. furiosus 70S ribosome in RsmB deleted strain
Classification: RIBOSOME
Source organism: Pyrococcus furiosus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2025-03-11
Authors: Matzov, D., Georgeson, J., Westhof, E., Schwartz, S., Shalev-Benami, M.
PDB entry 9qf7: PRMT2 in complex with aDMA analog
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2025-03-11
Authors: Cura, V., Dursun, E., Troffer, N., Cavarelli, J.
PDB entry 9qf8: Structure of the GH13 and MucBP domains of Ruminococcus bromii Amy10
Classification: HYDROLASE
Source organism: Ruminococcus bromii L2-63
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-03-11
Authors: Wimmer, B.H., Medalia, O.
PDB entry 9qf9: Structure of the GH13 domain of Ruminococcus bromii Amy16
Classification: HYDROLASE
Source organism: Ruminococcus bromii L2-63
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2025-03-11
Authors: Wimmer, B.H., Medalia, O.
PDB entry 9qfa: Structure of the GH13 and MucBP domains of Ruminococcus bromii Amy12
Classification: HYDROLASE
Source organism: Ruminococcus bromii L2-63
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-03-11
Authors: Wimmer, B.H., Medalia, O.
PDB entry 9qfb: Cryo-EM structure of the fully Coronin-1B-decorated actin filament in the ADP state.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.74 Å
Deposited: 2025-03-11
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qfc: Tankyrase 2 ARC4 in complex with a pyrrolone-based inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2025-03-11
Authors: Bosetti, C., Paakkonen, J., Lehtio, L.
PDB entry 9qfd: Cryo-EM structure of the fully cofilin-1-decorated actin filament (cofilactin)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2025-03-11
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qfe: Cryo-EM structure of the actin filament hetero-decorated by Coronin-1 and Cofilin-1 on separate actin strands
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2025-03-11
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qff: Structure of SOS1 in complex with compound 3
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.879 Å
Deposited: 2025-03-11
Authors: Breed, J.
PDB entry 9qfg: Cryo-EM structure of the actin filament hetero-decorated by Coronin-1 and Cofilin-1, strand boundary
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2025-03-11
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qfh: The composite map of of the AMPAR complex GluA3- TARP gamma2 in the apo state.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-03-11
Authors: Pokharna, A., Krieger, J., Greger, I., Singh, B.
PDB entry 9qfi: Crystal structure of YTHDF2 in complex with compound 6 (AI-DF2-47)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2025-03-11
Authors: Nai, F., Invernizzi, A., Caflisch, A.
PDB entry 9qfj: Cryo-EM structure of the cofilactin filament core at 2.3 Angstrom resolution.
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2025-03-11
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qfk: Cryo-EM structure of the Coronin-1B-decorated actin filament bound by one Cofilin-1 molecule (crosslinked)
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.99 Å
Deposited: 2025-03-11
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qfl: Crystal structure of YTHDF2 in complex with compound 15 (AI-DF2-68)
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-03-11
Authors: Nai, F., Invernizzi, A., Caflisch, A.
PDB entry 9qfm: LY12 Main Morphology
Classification: PROTEIN FIBRIL
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2025-03-12
Authors: Stoyanov, N., Schmidt, M., Faendrich, M.
PDB entry 9qfn: Crystal structure of T2R-TTL-Li5 complex
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2025-03-12
Authors: Oliva, M.A., Balaguer, F.A., Diaz, J.F.
PDB entry 9qfo: Cryo-EM structure of the cofilactin filament pointed end
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2025-03-12
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qfq: Cryo-EM structure of the cofilactin barbed end bound by AIP1
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2025-03-12
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qfr: Crystal structure of Def1 in complex with actinonin
Classification: HYDROLASE
Source organism: Vibrio cholerae O1 biovar El Tor str. N16961
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2025-03-12
Authors: Mechaly, A., Lamberioux, M., Haouz, A., Mazel, D.
PDB entry 9qfs: Structure of CHIP E3 ubiquitin ligase TPR domain in complex with compound 8.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.329 Å
Deposited: 2025-03-12
Authors: Breed, J.
PDB entry 9qft: Crystal structure of Def2 in complex with actinonin
Classification: HYDROLASE
Source organism: Vibrio cholerae O1 biovar El Tor str. N16961
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2025-03-12
Authors: Lamberioux, M., Mechaly, A., Haouz, A., Mazel, D.
PDB entry 9qfu: Human Tryptase beta-2 (hTPSB2) complexed with covalent inhibitor Compound #1
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.983 Å
Deposited: 2025-03-12
Authors: Porta, A., Manelfi, C., Talarico, C., Beccari, A.R., Brindisi, M., Summa, V., Iaconis, D., Gobbi, M., Beeg, M.
PDB entry 9qfv: Human Tryptase beta-2 (hTPSB2)
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2025-03-12
Authors: Porta, A., Manelfi, C., Talarico, C., Beccari, A.R., Brindisi, M., Summa, V., Iaconis, D., Gobbi, M., Beeg, M.
PDB entry 9qfw: Cryo-EM structure of the cofilactin barbed end bound by two AIP1 molecules
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2025-03-12
Authors: Oosterheert, W., Boiero Sanders, M., Hofnagel, O., Bieling, P., Raunser, S.
PDB entry 9qfx: Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycobacteroides abscessus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2025-03-12
Authors: Garaeva, A.A., Fabianova, V., Savkova, K., Huszar, S., Xue, X., Lowary, T.L., Mikusova, K., Seeger, M.A.
PDB entry 9qfy: Structure of CHIP E3 ubiquitin ligase TPR domain in complex with compound 9.
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.064 Å
Deposited: 2025-03-12
Authors: Breed, J.
PDB entry 9qfz: Human PPAR-gamma ligand binding domain in complex with LW132
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-03-13
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9qg0: Human PPAR-gamma ligand binding domain in complex with LW128
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2025-03-13
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9qg1: Natively purified Rubrerythrin 16-mer from the anaerobic extremophile P. furiosus
Classification: OXIDOREDUCTASE
Source organism: Pyrococcus furiosus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-03-13
Authors: Skalidis, I., Song, W., Howes, S., Foerster, F.
PDB entry 9qg2: Human PPAR-gamma ligand binding domain in complex with LW86
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2025-03-13
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9qg3: Human PPAR-gamma ligand binding domain in complex with LW129
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-03-13
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9qg4: Human PPAR-gamma ligand binding domain in complex with LW130
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2025-03-13
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9qg5: Human PPAR-gamma ligand binding domain in complex with LW112
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2025-03-13
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9qg6: Human PPAR-gamma ligand binding domain in complex with LW109
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2025-03-13
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9qg8: Crystal structure of the great reed warbler MHC class I in complex with an 8-mer peptide
Classification: IMMUNE SYSTEM
Source organism: Acrocephalus arundinaceus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2025-03-13
Authors: Venskutonyte, R., Lindkvist-Petersson, K.
PDB entry 9qg9: MDA phage capsid
Classification: VIRUS
Source organism: Neisseria meningitidis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-03-13
Authors: Boehning, J., Bharat, T.A.M.
PDB entry 9qga: Structure of native leukocyte myeloperoxidase in complex with a truncated version of the Staphylococcal Peroxidase Inhibitor SPIN and bromide at pH 7.5
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2025-03-13
Authors: Leitgeb, U., Pfanzagl, V.
PDB entry 9qgb: Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 (engineered Loop Swap from Achromobacter sp. JA81)
Classification: OXIDOREDUCTASE
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2025-03-13
Authors: Bischoff, D., Walla, B., Janowski, R., Maslakova, A., Maehler, C., Niessing, D., Weuster-Botz, D.
PDB entry 9qgc: Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 mutant Q204K
Classification: OXIDOREDUCTASE
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 1.239 Å
Deposited: 2025-03-13
Authors: Bischoff, D., Walla, B., Janowski, R., Maslakova, A., Niessing, D., Weuster-Botz, D.
PDB entry 9qgd: Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 mutant Q350K
Classification: OXIDOREDUCTASE
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 1.239 Å
Deposited: 2025-03-13
Authors: Bischoff, D., Walla, B., Janowski, R., Maslakova, A., Niessing, D., Weuster-Botz, D.
PDB entry 9qge: Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 mutant D352K
Classification: OXIDOREDUCTASE
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 1.433 Å
Deposited: 2025-03-13
Authors: Bischoff, D., Walla, B., Janowski, R., Maslakova, A., Niessing, D., Weuster-Botz, D.
PDB entry 9qgf: Crystal structure of an NADH-accepting ene reductase variant NostocER1-L1,5 mutant T354K
Classification: OXIDOREDUCTASE
Source organism: Nostoc sp. PCC 7120 = FACHB-418
Experimental method: X-RAY DIFFRACTION
Resolution: 1.444 Å
Deposited: 2025-03-13
Authors: Bischoff, D., Walla, B., Janowski, R., Maslakova, A., Niessing, D., Weuster-Botz, D.
PDB entry 9qgg: Consensus structure of dUBA1-UbDha-dBIRC6 trapped ternary complex
Classification: LIGASE
Source organism: Drosophila melanogaster; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.58 Å
Deposited: 2025-03-13
Authors: Riechmann, C., Elliott, P.R.
PDB entry 9qgh: BV333 aminotransferase from Streptomyces sp. mutant F61C
Classification: TRANSFERASE
Source organism: Streptomyces sp. BV333
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2025-03-13
Authors: De Rose, S.A., Isupov, M.N., Patti, S.
PDB entry 9qgi: Structure of dUBA1-UbDha-dBIRC6 trapped ternary complex (Cluster 2)
Classification: LIGASE
Source organism: Drosophila melanogaster; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.16 Å
Deposited: 2025-03-13
Authors: Riechmann, C., Elliott, P.R.
PDB entry 9qgj: Human PPAR-gamma ligand binding domain in complex with LW90
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2025-03-13
Authors: Oerlemans, G.J.M., Koops, A.A., Brunsveld, L.
PDB entry 9qgk: F-actin decorated by ITPKA
Classification: CYTOSOLIC PROTEIN
Source organism: Amanita phalloides; Gallus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2025-03-13
Authors: Yuan, B., Paraschiakos, T., Windhorst, S., Marlovits, T.C.
PDB entry 9qgl: Cryo-EM structure of the PlPVC1 baseplate, 6-fold symmetrized (C6), in extended state
Classification: VIRUS LIKE PARTICLE
Source organism: Photorhabdus luminescens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2025-03-14
Authors: Marin-Arraiza, L., Taylor, N.M.I.
PDB entry 9qgm: Cryo-EM structure of the PlPVC1 central spike, 3-fold symmetrized (C3), in extended state
Classification: VIRUS LIKE PARTICLE
Source organism: Photorhabdus luminescens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2025-03-14
Authors: Marin-Arraiza, L., Taylor, N.M.I.
PDB entry 9qgn: Cryo-EM structure of the PlPVC1 cap, 6-fold symmetrized (C6), in extended state
Classification: VIRUS LIKE PARTICLE
Source organism: Photorhabdus luminescens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.46 Å
Deposited: 2025-03-14
Authors: Marin-Arraiza, L., Taylor, N.M.I.
PDB entry 9qgo: Interaction between PlPVC1 baseplate and fiber in extended state
Classification: VIRUS LIKE PARTICLE
Source organism: Photorhabdus luminescens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6 Å
Deposited: 2025-03-14
Authors: Marin-Arraiza, L., Taylor, N.M.I.
PDB entry 9qgp: Cryo-EM structure of the PlPVC1 sheath, 6-fold symmetrized (C6), in contracted state
Classification: VIRUS LIKE PARTICLE
Source organism: Photorhabdus luminescens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-03-14
Authors: Marin-Arraiza, L., Taylor, N.M.I.
PDB entry 9qgq: Homotrimer of the extracellular PPIase Mpn444 from Mycoplasma pneumoniae
Classification: MEMBRANE PROTEIN
Source organism: Mycoplasmoides pneumoniae M129
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2025-03-14
Authors: Manger, S., Keles, I.
PDB entry 9qgr: Structure of dUBA1-UbDha-dBIRC6 trapped ternary complex (Cluster 4)
Classification: LIGASE
Source organism: Drosophila melanogaster; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-03-14
Authors: Riechmann, C., Elliott, P.R.
PDB entry 9qgu: ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycobacteroides abscessus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.69 Å
Deposited: 2025-03-14
Authors: Garaeva, A.A., Fabianova, V., Savkova, K., Huszar, S., Xue, X., Lowary, T.L., Mikusova, K., Seeger, M.A.
PDB entry 9qgv: SciA(H42Q) endonuclease from Escherichia phage T5 in complex with 10 bp DNA (GCGC sequence 2)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia phage T5; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2025-03-14
Authors: Richardson, J.M., MacNeill, S.A.
PDB entry 9qgw: Consensus structure of UBA6-UbDha-BIRC6 trapped ternary complex (singly loaded)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.62 Å
Deposited: 2025-03-14
Authors: Riechmann, C., Elliott, P.R.
PDB entry 9qgx: SciA(H42A) endonuclease from Escherichia phage T5 in complex with 10 bp DNA (GCGC sequence 1)
Classification: DNA BINDING PROTEIN
Source organism: Escherichia phage T5; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2025-03-14
Authors: Richardson, J.M., MacNeill, S.A.
PDB entry 9qgy: Structure of the YbjP lipoprotein bound to the MacAB-TolC tripartite efflux pump
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2025-03-14
Authors: Kaplan, E., Horne, J., Luisi, B.F.
PDB entry 9qgz: Crystal structure of a D-lactate dehydrogenase from Porcellio dilatatus
Classification: OXIDOREDUCTASE
Source organism: Porcellio dilatatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2025-03-14
Authors: Borges, P.T., Frazao, C., Martins, L.O.
PDB entry 9qh0: Escherichia coli polynucleotide phosphorylase in complex with recognition site of RNase E
Classification: RNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.52 Å
Deposited: 2025-03-14
Authors: Paris, G., Luisi, B.F.
PDB entry 9qh1: ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycobacteroides abscessus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2025-03-17
Authors: Garaeva, A.A., Fabianova, V., Savkova, K., Huszar, S., Xue, X., Lowary, T.L., Mikusova, K., Seeger, M.A.
PDB entry 9qh2: wild-type APO Purine Nucleoside Phosphorylase from Parageobacillus thermoglucosidasius
Classification: TRANSFERASE
Source organism: Parageobacillus thermoglucosidasius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2025-03-14
Authors: Westarp, S., Williams, E.P., Koekemoer, L., Bradshaw, W., Marx, M., Elkins, J., MacLean, B., Wright, N.
PDB entry 9qh3: Pseudomonas aeruginosa polynucleotide phosphorylase in complex with recognition site of RNase E
Classification: RNA BINDING PROTEIN
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2025-03-14
Authors: Paris, G., Luisi, B.F.
PDB entry 9qh4: NorQ hexamer from Paracoccus denitrificans
Classification: CHAPERONE
Source organism: Paracoccus denitrificans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2025-03-14
Authors: Kahle, M., Appelgren, S., Carroni, M., Adelroth, P., Wendler, P.
PDB entry 9qh5: Consensus structure of UBA6-UbDha-BIRC6 trapped ternary complex (doubly loaded)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2025-03-14
Authors: Riechmann, C., Elliott, P.R.
PDB entry 9qh6: NorQ in complex with NorD VWA domain from Paracoccus denitrificans
Classification: CHAPERONE
Source organism: Paracoccus denitrificans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-03-14
Authors: Kahle, M., Appelgren, S., Carroni, M., Adelroth, P., Wendler, P.
PDB entry 9qh7: NorQ in complex with NorD VWA domain steep staircase subset 1 from Paracoccus denitrificans
Classification: CHAPERONE
Source organism: Paracoccus denitrificans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2025-03-14
Authors: Kahle, M., Appelgren, S., Carroni, M., Adelroth, P., Wendler, P.
PDB entry 9qh8: reduced NorQ-NorD VWA domain complex from Paracoccus denitrificans
Classification: CHAPERONE
Source organism: Paracoccus denitrificans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-03-14
Authors: Kahle, M., Appelgren, S., Carroni, M., Adelroth, P., Wendler, P.
PDB entry 9qh9: NorQ in complex with NorD VWA domain steep staircase subset 2 from Paracoccus denitrificans
Classification: CHAPERONE
Source organism: Paracoccus denitrificans
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2025-03-14
Authors: Kahle, M., Appelgren, S., Carroni, M., Adelroth, P., Wendler, P.
PDB entry 9qhb: Crystal structure of 16-repeat CTPR protein with eliminated coordination sites
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2025-03-14
Authors: Liutkus, M., Rojas, A.L., Cortajarena, A.L.
PDB entry 9qhc: Crystal structure of 8-repeat CTPR protein with eliminated coordination sites
Classification: DE NOVO PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.88 Å
Deposited: 2025-03-14
Authors: Liutkus, M., Rojas, A.L., Cortajarena, A.L.
PDB entry 9qhd: NorQD complex state 1 from Jhaorihella thermophila
Classification: CHAPERONE
Source organism: Jhaorihella thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-03-15
Authors: Kahle, M., Appelgren, S., Carroni, M., Adelroth, P., Wendler, P.
PDB entry 9qhe: NorQD complex state 2 from Jhaorihella thermophila
Classification: CHAPERONE
Source organism: Jhaorihella thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-03-15
Authors: Kahle, M., Appelgren, S., Carroni, M., Adelroth, P., Wendler, P.
PDB entry 9qhf: NorQD complex state 3 from Jhaorihella thermophila
Classification: CHAPERONE
Source organism: Jhaorihella thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2025-03-15
Authors: Kahle, M., Appelgren, S., Carroni, M., Adelroth, P., Wendler, P.
PDB entry 9qhg: NorQD complex state 4 from Jhaorihella thermophila
Classification: CHAPERONE
Source organism: Jhaorihella thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2025-03-15
Authors: Kahle, M., Appelgren, S., Carroni, M., Adelroth, P., Wendler, P.
PDB entry 9qhh: Lymphostatin - pH 8 - phosphate buffer
Classification: TOXIN
Source organism: Escherichia coli O127:H6
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2025-03-15
Authors: Griessmann, M., Schneider, R., Rasmussen, T., Bottcher, B.
PDB entry 9qhi: Structure of UBA6-UbDha-BIRC6 trapped ternary complex (cluster 0)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.27 Å
Deposited: 2025-03-15
Authors: Riechmann, C., Elliott, P.R.
PDB entry 9qhj: ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycobacteroides abscessus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2025-03-15
Authors: Garaeva, A.A., Fabianova, V., Savkova, K., Huszar, S., Xue, X., Lowary, T.L., Mikusova, K., Seeger, M.A.
PDB entry 9qhk: Nucleotide-free wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Mycobacteroides abscessus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2025-03-15
Authors: Garaeva, A.A., Fabianova, V., Savkova, K., Huszar, S., Xue, X., Lowary, T.L., Mikusova, K., Seeger, M.A.
PDB entry 9qhl: ExsF in complex with BclA N-ter peptide
Classification: STRUCTURAL PROTEIN
Source organism: Bacillus thuringiensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2025-03-16
Authors: Sogues, A., Sleutel, M., Remaut, H.
PDB entry 9qhm: Cryo-EM structure of mouse TRPM3 alpha 2 in complex with antagonist Ononetin
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.61 Å
Deposited: 2025-03-16
Authors: Shkumatov, A.V., Schenck, S., Brunner, J.D.
PDB entry 9qhn: Cryo-EM structure of mouse TRPM3 alpha 2 in APO state
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2025-03-16
Authors: Shkumatov, A.V., Schenck, S., Brunner, J.D.
PDB entry 9qho: Cryo-EM structure of mouse TRPM3 alpha 2 in complex with antagonist Primidone
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2025-03-16
Authors: Shkumatov, A.V., Schenck, S., Brunner, J.D.
PDB entry 9qhp: Cryo-EM structure of mouse TRPM3 alpha 2 in complex with antagonist Isosakuranetin
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2025-03-16
Authors: Shkumatov, A.V., Schenck, S., Brunner, J.D.
PDB entry 9qhq: Cryo-EM structure of mouse TRPM3 alpha 2 in with agonists CIM-0216 and Pregnenolone sulfate (PregS)
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2025-03-16
Authors: Shkumatov, A.V., Schenck, S., Brunner, J.D.
PDB entry 9qhr: Crystal structure of the second bromodomain of C. albicans Rsc1
Classification: DNA BINDING PROTEIN
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2025-03-16
Authors: Petosa, C., Sayou, C., Govin, J.
PDB entry 9qhs: phiLo family-A DNA polymerase with modified template
Classification: DNA BINDING PROTEIN
Source organism: Thermus phage phiLo; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2025-03-16
Authors: Missoury, S., Delarue, M.
PDB entry 9qhv: ADP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Mycobacteroides abscessus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.04 Å
Deposited: 2025-03-16
Authors: Garaeva, A.A., Fabianova, V., Savkova, K., Huszar, S., Xue, X., Lowary, T.L., Mikusova, K., Seeger, M.A.
PDB entry 9qhw: ATP-bound wild type Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Mycobacteroides abscessus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2025-03-16
Authors: Garaeva, A.A., Fabianova, V., Savkova, K., Huszar, S., Xue, X., Lowary, T.L., Mikusova, K., Seeger, M.A.
PDB entry 9qhx: ATP-bound E178Q Wzm-Wzt from Mycobacterium abscessus in nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Mycobacteroides abscessus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2025-03-16
Authors: Garaeva, A.A., Fabianova, V., Savkova, K., Huszar, S., Xue, X., Lowary, T.L., Mikusova, K., Seeger, M.A.
PDB entry 9qi3: Crystal structure of I105Y/S130G double mutant of BlaC from Mycobacterium tuberculosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2025-03-17
Authors: Chikunova, A., Radojkovic, M., Ubbink, M.