LiteFold/PDB huggingface dataset:
PDB entry 9hkr: NMR structure of the C-terminal domain of the human SPAG1 protein
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-12-04
Authors: Chagot, M.E., Quinternet, M.
PDB entry 9hks: Protein Kinase CK2 and small molecule ligands
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-12-04
Authors: Krimm, I., Gelin, M., Guichou, J.F.
PDB entry 9hku: Crystal structure of CREBBP histone acetyltransferase domain in complex with Acetyl-Coenzyme A
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.356 Å
Deposited: 2024-12-04
Authors: Mechaly, A.E., Zhang, W., Cui, G., Green, M.R., Rodrigues-Lima, F.
PDB entry 9hkv: Cryo-EM structure of Pseudomonas aeruginosa tetrameric S-adenosyl-L-homocysteine hydrolase in the fully open state
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-12-04
Authors: Malecki, P.H., Wozniak, K., Ruszkowski, M., Brzezinski, K.
PDB entry 9hkw: Cryo-EM structure of Pseudomonas aeruginosa tetrameric S-adenosyl-L-homocysteine hydrolase with 3 open and 1 closed subunits
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-12-04
Authors: Malecki, P.H., Wozniak, K., Ruszkowski, M., Brzezinski, K.
PDB entry 9hkx: Cryo-EM structure of Pseudomonas aeruginosa tetrameric S-adenosyl-L-homocysteine hydrolase with 1 open and 3 closed subunits
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-12-04
Authors: Malecki, P.H., Wozniak, K., Ruszkowski, M., Brzezinski, K.
PDB entry 9hky: Cryo-EM structure of Pseudomonas aeruginosa tetrameric S-adenosyl-L-homocysteine hydrolase with 2 open and 2 closed subunits
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-12-04
Authors: Malecki, P.H., Wozniak, K., Ruszkowski, M., Brzezinski, K.
PDB entry 9hkz: Cryo-EM structure of Pseudomonas aeruginosa tetrameric S-adenosyl-L-homocysteine hydrolase with 2 wide open, 1 open and 1 closed subunits
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-04
Authors: Malecki, P.H., Wozniak, K., Ruszkowski, M., Brzezinski, K.
PDB entry 9hl0: Protein Kinase CK2 and small molecule ligands
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.63 Å
Deposited: 2024-12-04
Authors: Krimm, I., Gelin, M., Guichou, J.F.
PDB entry 9hl1: DtpB in complex with photocaged nitric oxide, 10 ms, 10 microjoule, SFX
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-12-04
Authors: Smyth, P., Williams, L.J., Hough, M.A., Worrall, J.A.R., Owen, R.L.
PDB entry 9hl2: Structure of A56/K2 (vaccinia virus)
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-12-04
Authors: Vernuccio, R., Meola, A., Guardado-Calvo, P.
PDB entry 9hl3: TRPML1 in complex with compound 1a
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-12-04
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hl4: TRPML1 in complex with compound 3
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-12-04
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hl5: Crystal structure of halo-tolerant PETase from marine metagenome (HaloPETase1)
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.16 Å
Deposited: 2024-12-04
Authors: Turak, O., Kriegel, M., Hocker, B.
PDB entry 9hl6: TRPML1 in complex with compound 4a
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-12-04
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hl7: Protein Kinase CK2 and small molecule ligands
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-12-04
Authors: Krimm, I., Gelin, I., Guichou, J.F.
PDB entry 9hl8: TRPML1 in complex with compound 8
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-12-04
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hl9: CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN
Classification: RIBOSOME
Source organism: Leishmania major strain Friedlin
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-12-04
Authors: Rajan, K.S., Yonath, A.
PDB entry 9hla: TRPML1 in complex with compound 9a
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-12-04
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hlb: TRPML1 in complex with compound 10
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-12-04
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hlc: TRPML1 in complex with compound 11
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-12-04
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hld: TRPML1 in complex with compound 13
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-12-04
Authors: Reeks, J., Mahajan, P., Clark, M., Cowan, S.R., Di Daniel, E., Earl, C.P., Fisher, S., Holvey, R.S., Jackson, S.M., Lloyd-Evans, E., Morgillo, C.M., Mortenson, P.N., O'Reilly, M., Richardson, C.J., Schopf, P., Tams, D.M., Waller-Evans, H., Ward, S.E., Whibley, S., Williams, P.A., Johnson, C.N.
PDB entry 9hle: Structure of Mycobacterium tuberculosis SteB (Rv1698), a cell division regulator
Classification: CELL CYCLE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.035 Å
Deposited: 2024-12-04
Authors: Carloni, G., Wehenkel, A.M., Alzari, P.M.
PDB entry 9hlf: Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH14445
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.64 Å
Deposited: 2024-12-04
Authors: Scaletti Hutchinson, E., Stenmark, P.
PDB entry 9hlg: Influenza Neuraminidase in complex with N-Acyl Oseltamivir inhibitor
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2024-12-04
Authors: Moran, E., Davies, G.
PDB entry 9hlh: Influenza Neuraminidase in complex with N-Acyl Oseltamivir inhibitor
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.25 Å
Deposited: 2024-12-04
Authors: Moran, E., Davies, G.
PDB entry 9hli: Influenza Neuraminidase in complex with N-Acyl Oseltamivir inhibitor
Classification: VIRAL PROTEIN
Source organism: Influenza A virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2 Å
Deposited: 2024-12-04
Authors: Moran, E., Davies, G.
PDB entry 9hlj: Crystal structure of GV37-TCR in complex with HLA-C*12:02 with KAYNVTQAF (KF9), a 9-mer epitope from SARS-CoV-2 Nucleocapsid (N266-274)
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2024-12-05
Authors: Ahn, Y.M., Maddumage, J.C., Chatzileontiadou, D.S.M., Gras, S.
PDB entry 9hlk: X-ray structure of the adduct formed upon reaction of the diiodido analogue of picoplatin with lysozyme (structure A)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-12-05
Authors: Ferraro, G., Merlino, A.
PDB entry 9hll: murine aM I-domain in complex with nanobody aCR3
Classification: IMMUNE SYSTEM
Source organism: Lama glama; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-12-05
Authors: Fruergaard, M.U., Andersen, G.R.
PDB entry 9hlm: Soft-landed and rehydrated beta-galactosidase (best particles)
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-12-05
Authors: Barrass, S.V., Esser, T.K., Mowry, N.J., Eriksson, L., Hruby, J., Seeley, L.T., Drabbels, M., Baker, L.A., Rauschenbach, S., Lorenz, U.J.
PDB entry 9hlp: Crystal structure of human TRF1 TRFH domain in complex with compound 18
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2024-12-05
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hlq: Crystal structure of human TRF1 TRFH domain in complex with compound 57
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-12-05
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hlr: Crystal structure of human TRF1 TRFH domain in complex with compound 15
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-12-05
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hls: Structure of A16/G9 (vaccinia virus) in complex with VHH D07, VHH B01 and VHH C05
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-12-05
Authors: Vernuccio, R., Meola, A., Guardado-Calvo, P.
PDB entry 9hlt: Crystal structure of human TRF1 TRFH domain in complex with compound 13
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2024-12-05
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hlu: Crystal structure of human TRF1 TRFH domain in complex with compound 19
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2024-12-05
Authors: Casale, G., Le Bihan, Y.-V., van Montfort, R.L.M., Guettler, S.
PDB entry 9hlw: Prostate Specific Membrane Antigen (PSMA) in complex with nanobody7
Classification: MEMBRANE PROTEIN
Source organism: Camelus dromedarius; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.66 Å
Deposited: 2024-12-05
Authors: Alon, G., Papo, N., Zarivach, R., Zalk, R.
PDB entry 9hlx: Structure of Ba1Cas12a3 binary complex
Classification: RNA BINDING PROTEIN
Source organism: Bacteroidota bacterium; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-12-05
Authors: Yuan, B., Heinz, D.W.
PDB entry 9hly: Crystal structure of Arabidopsis thaliana Acyl-ACP Thioesterase (At-FatA) complexed with N-(3-chlorophenyl)-2-[4-(2-fluorophenyl)-3-methoxy-5-oxo-2H-pyrrol-1-yl]-2-methyl-propanamide
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-12-05
Authors: Montgomery, M.G.
PDB entry 9hlz: Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae W303
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-06
Authors: Carlstrom, A., Rovsnik, U., Ott, M.
PDB entry 9hm0: Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae W303
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-12-06
Authors: Carlstrom, A., Rovsnik, U., Ott, M.
PDB entry 9hm2: A swapped dimeric form of ZO1/TJP1 PDZ2 in complex with the C-terminal peptide from protein E of SARS-CoV-2
Classification: CELL ADHESION
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2024-12-06
Authors: Alvarez, F., Mechaly, A., Haouz, A., Caillet-Saguy, C.
PDB entry 9hm4: Structure of tRNA bound Ba1Cas12a3
Classification: RNA BINDING PROTEIN
Source organism: Bacteroidetes bacterium HGW-Bacteroidetes-12; Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-12-06
Authors: Yuan, B., Heinz, D.W.
PDB entry 9hm5: Structure of cleaved tRNA fragment bound Ba1Cas12a3
Classification: RNA BINDING PROTEIN
Source organism: Bacteroidota bacterium; Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-06
Authors: Yuan, B., Heinz, D.W.
PDB entry 9hm6: Structure of Ba1Cas12a3 ternary complex
Classification: RNA BINDING PROTEIN
Source organism: Bacteroidetes bacterium HGW-Bacteroidetes-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2024-12-06
Authors: Yuan, B., Heinz, D.W.
PDB entry 9hm7: Cryo-EM structure of apo human separase with the mutation C2029S
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-06
Authors: Yu, J., Schmidt, S., Botto, M., Boland, A.
PDB entry 9hm8: NMR solution structure of RPRD2 CTD-interacting domain and pS2,7 RNAPII CTD peptide.
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: SOLUTION NMR
Deposited: 2024-12-07
Authors: Linhartova, K., Macosek, J., Kubicek, K., Smirakova, E., Stefl, R.
PDB entry 9hm9: Structure of the optimized F-tractin in complex with F-actin
Classification: CYTOSOLIC PROTEIN
Source organism: Oryctolagus cuniculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-12-07
Authors: Shatskiy, D., Belyy, A.
PDB entry 9hma: Cryo-EM structure of apo human separase
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-07
Authors: Yu, J., Schmidt, S., Botto, M., Boland, A.
PDB entry 9hmb: Crystal structure of GH139 glycoside hydrolase from Verrucomicrobium sp. in the hexagonal space group P6522
Classification: HYDROLASE
Source organism: Verrucomicrobium sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-12-08
Authors: Moraleda-Montoya, A., Garcia-Alija, M., Trastoy, B., Guerin, M.
PDB entry 9hmc: Crystal structure of PDE6D in complex with compound 5e
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-12-09
Authors: Zhang, R., Waldmann, H., Gasper, R.
PDB entry 9hmd: Crystal structure of PDE6D in complex with DeltaTag (6a)
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-12-09
Authors: Zhang, R., Waldmann, H., Gasper, R.
PDB entry 9hmf: Periplasmic scaffold of the Campylobacter jejuni flagellar motor (alpha carbon trace)
Classification: STRUCTURAL PROTEIN
Source organism: Campylobacter jejuni
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.9 Å
Deposited: 2024-12-09
Authors: Drobnic, T., Beeby, M.
PDB entry 9hmk: X-ray structure of the adduct formed upon reaction of the diiodido analogue of picoplatin with lysozyme (structure B)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2024-12-09
Authors: Ferraro, G., Merlino, A.
PDB entry 9hml: KIR2DL1 bound to RIFIN PfKE01_040007400
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens; Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.171 Å
Deposited: 2024-12-09
Authors: Chamberlain, S.G., Higgins, M.K.
PDB entry 9hmm: Crystal structure of mouse ADAT2/ADAT3 tRNA deamination complex A180V mutant
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-12-09
Authors: Vaca, H.R., Romier, C.
PDB entry 9hmn: CryoEM structure of human 20S proteasome in complex with proteasome inhibitor Salinosporamid A
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-12-09
Authors: Suelzen, H., Boura, E., Silhan, J.
PDB entry 9hmo: X-ray structure of the C-terminal domain (residues 366-485) of S. pombe threonylcarbamoyladenosine dehydratase
Classification: RNA BINDING PROTEIN
Source organism: Schizosaccharomyces pombe
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-12-09
Authors: Hirschmann, J., Huber, E.M.
PDB entry 9hmp: X-ray structure of S. cerevisiae threonylcarbamoyladenosine dehydratase 1 (residues 50-429) in complex with AMP
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2024-12-09
Authors: Hirschmann, J., Huber, E.M.
PDB entry 9hmq: X-structure of the adduct formed upon reaction of the diiodido analogue of picoplatin with lysozyme (structure C)
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-12-09
Authors: Ferraro, G., Merlino, A.
PDB entry 9hmr: KRAS-G12V-D92C covalently bound to BI-1830
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-12-09
Authors: van Tienen, L.M., Zak, K.M., Kessler, D., Sellers, W.R.
PDB entry 9hms: Cryo-EM structure of human separase bound to SCC1 (310-550 aa) and SA2
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-12-09
Authors: Yu, J., Schmidt, S., Botto, M., Boland, A.
PDB entry 9hmt: Crystal structure of Arabidopsis thaliana Acyl-ACP Thioesterase (At-FatA) complexed with methiozolin-fluorine
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2024-12-09
Authors: Montgomery, M.G.
PDB entry 9hmu: DUF4465 domain containing protein in complex with vitamin B12.
Classification: MEMBRANE PROTEIN
Source organism: Coraliomargarita akajimensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-12-09
Authors: Clarke, C., Banasik, M., Pickersgill, R.W.
PDB entry 9hmv: Cryo-EM structure of SA2-SCC1 complex at 2.9 angstrom
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-09
Authors: Yu, J., Schmidt, S., Botto, M., Boland, A.
PDB entry 9hmw: Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA
Classification: RIBOSOME
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.25 Å
Deposited: 2024-12-09
Authors: Faille, A., Warren, A.J.
PDB entry 9hmx: Structure of SteB-RipA complex from Mycobacterium tuberculosis
Classification: CELL CYCLE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2024-12-09
Authors: Carloni, G., Wehenkel, A.M., Alzari, P.M.
PDB entry 9hmy: Structure of Mycobacterium tuberculosis SteA (Rv1697), a cell division regulator
Classification: CELL CYCLE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.167 Å
Deposited: 2024-12-09
Authors: Carloni, G., Wehenkel, A.M., Alzari, P.M.
PDB entry 9hmz: Structure of Corynebacterium glutamicum SteA, a cell division regulator
Classification: CELL CYCLE
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-12-09
Authors: Gaday, Q., Carloni, G., Wehenkel, A.M., Alzari, P.M.
PDB entry 9hn0: Cryo-EM structure of human separase bound to SCC1 (310-550 aa)
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-12-10
Authors: Yu, J., Schmidt, S., Botto, M., Boland, A.
PDB entry 9hn3: Mouse phosphomannomutase 2 in apo state from crystals with PEG 3350
Classification: ISOMERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2024-12-10
Authors: Del Cano-Ochoa, F., Vilar, M., Vilas, A., Company, R., Perez, B., Ramon-Maiques, S.
PDB entry 9hn4: Cryo-EM structure of human separase bound to phosphorylated SCC1 (310-550 aa)
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-12-10
Authors: Yu, J., Schmidt, S., Botto, M., Boland, A.
PDB entry 9hn5: Cryo-EM structure of human separase bound to phosphorylated SCC1 (100-320 aa)
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-12-10
Authors: Yu, J., Schmidt, S., Botto, M., Boland, A.
PDB entry 9hn6: X-ray structure of the adduct formed upon reaction of the diiodido analogue of picoplatin with ribonuclease A
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-12-10
Authors: Ferraro, G., Merlino, A.
PDB entry 9hn7: Mouse QTRT1/2 in complex with mouse tRNA-Tyr
Classification: RNA BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-10
Authors: Kaczmarczyk, I., Koziej, L., Glatt, S.
PDB entry 9hn8: Apo Structure of Truncated 1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Mycobacterium tuberculosis
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-12-10
Authors: Gawriljuk, V.O., Groves, M.R.
PDB entry 9hn9: Mouse QTRT1/2 in complex with mouse pre-tRNA-Tyr-1-4
Classification: RNA BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-10
Authors: Kaczmarczyk, I., Koziej, L., Glatt, S.
PDB entry 9hna: Crystal structure of apo Ami2B domain of DS6A-LysA
Classification: VIRUS
Source organism: Mycobacterium phage DS6A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-12-10
Authors: Ceballos-Zuniga, F., Perez-Dorado, I.
PDB entry 9hnb: X-ray structure of the adduct formed upon reaction of the diiodido analogue of picoplatin with human serum albumin
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2024-12-10
Authors: Ferraro, G., Merlino, A.
PDB entry 9hnc: Crystal structure of potassium-independent L-asparaginase from Phaseolus vulgaris (PvAIII, PvAspG2)
Classification: HYDROLASE
Source organism: Phaseolus vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.879 Å
Deposited: 2024-12-10
Authors: Loch, J.I., Pierog, I., Imiolczyk, B., Barciszewski, J., Marsolais, F., Gilski, M., Jaskolski, M.
PDB entry 9hne: Cereblon in complex with DDB1, GSPT1 and Compound-1
Classification: ONCOPROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2024-12-10
Authors: Klejnot, M., Walczak, M.J.
PDB entry 9hnf: Beta-keto acid cleavage enzyme from Paracoccus denitrificans with bound acetoacetate and acetyl-CoA
Classification: LYASE
Source organism: Paracoccus denitrificans PD1222
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-12-10
Authors: Marchal, D.G., Zarzycki, J., Erb, T.J.
PDB entry 9hng: Structure of A16/G9 (G9 mutant - H44Y) of Vaccinia virus in complex with VHH D07
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-12-10
Authors: Vernuccio, R., Meola, A., Guardado-Calvo, P.
PDB entry 9hnh: A7 Synthetic Alpha solenoid Protein
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2024-12-10
Authors: Pretorius, D., Murray, J.W.
PDB entry 9hnj: NMR solution structure of OrfM from ICESt3 of Streptococcus thermophilus
Classification: NUCLEAR PROTEIN
Source organism: Streptococcus thermophilus
Experimental method: SOLUTION NMR
Deposited: 2024-12-10
Authors: Tsan, P., Cappele, J., Laroussi, H., Clement, E., Favier, F., Didierjean, C., Soler, N., Leblond-Bourget, N.
PDB entry 9hnk: Structure of the (6-4) photolyase of Caulobacter crescentus in its oxidizd state - Singal crystal / Synchrotron
Classification: FLAVOPROTEIN
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2024-12-11
Authors: Po Hsun, W., Maestre-Reyna, M., Essen, L.-O.
PDB entry 9hnl: Structure of the (6-4) photolyase of Caulobacter crescentus in its oxidized state at room temperture-synchrotron
Classification: FLAVOPROTEIN
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-12-11
Authors: Po Hsun, W., Maestre-Reyna, M., Essen, L.-O.
PDB entry 9hnm: Structure of the (6-4) photolyase of Caulobacter crescentus in its dark adapted and oxidized state determined by serial femtosecond crystallography
Classification: FLAVOPROTEIN
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2024-12-11
Authors: Po Hsun, W., Maestre-Reyna, M., Essen, L.-O.
PDB entry 9hnn: Structure of the (6-4) photolyase of Caulobacter crescentus in its fully reduced state determined by serial femtosecond crystallography
Classification: FLAVOPROTEIN
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-12-11
Authors: Po Hsun, W., Maestre-Reyna, M., Essen, L.-O.
PDB entry 9hno: Structure of the (6-4) photolyase of Caulobacter crescentus in its iron sulfur cluster oxidized state determined by serial femtosecond crystallography
Classification: FLAVOPROTEIN
Source organism: Caulobacter vibrioides
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-12-11
Authors: Po Hsun, W., Maestre-Reyna, M., Essen, L.-O.
PDB entry 9hnp: Cryo-EM structure of the glucose-specific PTS transporter IICB from E. coli in an intermediate state
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.53 Å
Deposited: 2024-12-11
Authors: Roth, P., Fotiadis, D.
PDB entry 9hnq: a5b3 GABAA Receptor bound to GABA and Mb25 in desensitized state in detergent micelles
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.81 Å
Deposited: 2024-12-11
Authors: Cowgill, J., Fan, C., Howard, R.J., Lindahl, E.
PDB entry 9hnr: a5b3 GABAA Receptor in 1 a5 to 4 b3 stoichiometry in desensitized state
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-12-11
Authors: Cowgill, J., Fan, C., Howard, R.J., Lindahl, E.
PDB entry 9hns: a5b3 GABAAR bound to GABA and Mb25 in a desensitized state in saposin nanodiscs after long GABA treatment
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-11
Authors: Cowgill, J., Fan, C., Howard, R.J., Lindahl, E.
PDB entry 9hnt: a5b3 GABAAR bound to Etomidate, GABA, and Mb25 in a desensitized state in saposin nanodiscs
Classification: MEMBRANE PROTEIN
Source organism: Aequorea victoria; Escherichia coli; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2024-12-11
Authors: Cowgill, J., Fan, C., Howard, R.J., Lindahl, E.
PDB entry 9hnu: Crystal structure of GH19 E228Q domain of D29-LysA
Classification: HYDROLASE
Source organism: Mycobacterium phage D29
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2024-12-11
Authors: Ceballos-Zuniga, F., Perez-Dorado, I.
PDB entry 9hnv: Crystal structure of a N-terminal GH19 domain of DS6A-LysA
Classification: HYDROLASE
Source organism: Mycobacterium phage DS6A
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2024-12-11
Authors: Ceballos-Zuniga, F., Perez-Dorado, I.
PDB entry 9hnw: USP1-UAF1 bound to Lys63-linked diubiquitin
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-12-11
Authors: Keijzer, N., Sakoltchik, J., Sixma, T.K.
PDB entry 9hnx: Crystal structure of human carbonic anhydrase II in complex with N-benzyl-2-(2-chloro-N-(4-sulfamoylphenethyl)acetamido)-2-phenylacetamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2024-12-11
Authors: Angeli, A., Ferraroni, M.
PDB entry 9hny: Mitoribosomal small subunit in complex with Mettl15 and Mettl17
Classification: RIBOSOME
Source organism: Trypanosoma brucei
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-12-11
Authors: Zgadzay, Y., Aibara, S., Gahura, O., Amunts, A.
PDB entry 9hnz: Room temperature structure of Aspartyl/Asparaginyl beta-hydroxylase (AspH) in complex with Fe, 2-oxoglutarate and hydroxylated Factor X derived peptide fragment, 2 h O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2024-12-11
Authors: de Munnik, M., Rabe, P., Brasnett, A., Brewitz, L., Schofield, C.J.
PDB entry 9ho0: Aspartyl/Asparaginyl beta-hydroxylase (AspH) in complex with Fe, 2-oxoglutarate, succinate and the hydroxylated product of Factor X derived peptide fragment, 12 h O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2024-12-11
Authors: de Munnik, M., Brasnett, A., Rabe, P., Brewitz, L., Park, J., Schofield, C.J., Zhou, T.
PDB entry 9ho1: Room temperature structure of Aspartyl/Asparaginyl beta-hydroxylase (AspH) in complex with Fe, 2-oxoglutarate, and hydroxylated Factor X derived peptide fragment, 1.5 s O2 exposure
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-12-11
Authors: de Munnik, M., Rabe, P., Brewitz, L., Brasnett, A., Zhou, T., Schofield, C.J., Kern, J.F.
PDB entry 9ho2: Room temperature structure of Aspartyl/Asparaginyl beta-hydroxylase (AspH) in complex with Fe, 2-oxoglutarate and Factor X derived peptide fragment, excess Fe removed
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-12-11
Authors: de Munnik, M., Rabe, P., Brewitz, L., Brasnett, A., Zhou, T., Schofield, C.J., Kern, J.F.
PDB entry 9ho3: Aspartyl/Asparaginyl beta-hydroxylase (AspH) in complex with Fe, 2OG, nitric oxide, and Factor X peptide fragment
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2024-12-11
Authors: de Munnik, M., Rabe, P., Brasnett, A., Brewitz, L., Schofield, C.J.
PDB entry 9ho4: Crystal Structure of the Human Frataxin protein in complex with a tailored Camelid Nanobody 6B1
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-12-11
Authors: Garay-Alvarez, A., Molina, R., Hermoso, J.A.
PDB entry 9ho5: Crystal Structure of the Human Frataxin protein in complex with a tailored Camelid Nanobody 4A7
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-12-11
Authors: Garay-Alvarez, A., Molina, R., Hermoso, J.A.
PDB entry 9ho6: Crystal Structure of the Human Frataxin protein in complex with a tailored Camelid Nanobody 16C10
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-12-11
Authors: Garay-Alvarez, A., Molina, R., Hermoso, J.A.
PDB entry 9ho7: DtpB in complex with photocaged nitric oxide, 10 ms, 30 microjoule, SFX
Classification: OXIDOREDUCTASE
Source organism: Streptomyces lividans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2024-12-11
Authors: Smyth, P., Williams, L.J., Hough, M.A., Worrall, J.A.R., Owen, R.L.
PDB entry 9hp7: Crystal structure of GH19 E228Q domain of D29-LysA in complex with (GlcNAc)4
Classification: HYDROLASE
Source organism: Mycobacterium phage D29
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-12-12
Authors: Ceballos-Zuniga, F., Perez-Dorado, I.
PDB entry 9hp8: PAM-bound Cas9-Cas1-Cas2-Csn2 supercomplex in the docked conformation, Streptococcus thermophilus DGCC 7710 CRISPR3 system
Classification: DNA BINDING PROTEIN
Source organism: Streptococcus thermophilus DGCC 7710; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-12-12
Authors: Sasnauskas, G., Gaizauskaite, U., Tamulaitiene, G.
PDB entry 9hp9: Cas9-Cas1-Cas2-Csn2 supercomplex with dsDNA in PAM-unbound conformation, Streptococcus thermophilus DGCC 7710 CRISPR3 system
Classification: DNA BINDING PROTEIN
Source organism: Streptococcus thermophilus DGCC 7710; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2024-12-12
Authors: Sasnauskas, G., Gaizauskaite, U., Tamulaitiene, G.
PDB entry 9hpa: Structure of A16/G9 (vaccinia virus) in complex with VHH D07 and VHH E12
Classification: VIRAL PROTEIN
Source organism: Vaccinia virus Western Reserve; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2024-12-12
Authors: Vernuccio, R., Meola, A., Guardado-Calvo, P.
PDB entry 9hpb: Mouse phosphomannomutase 2 in apo state from crystals with PEG 8000
Classification: ISOMERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2024-12-12
Authors: Ramon-Maiques, S., Del Cano-Ochoa, F., Company, R.
PDB entry 9hpc: The TMD and the LBD region of the AMPAR complex GluA3- TARP gamma2 in the apo state.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-12-12
Authors: Pokharna, A., Krieger, J., Greger, I.
PDB entry 9hpd: The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the open state.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2024-12-12
Authors: Pokharna, A., Krieger, J., Greger, I.
PDB entry 9hpe: The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the apo state
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-12-12
Authors: Pokharna, A., Krieger, J., Greger, I., Singh, B.
PDB entry 9hpf: The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3- TARP gamma2 in the desensitised state.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.77 Å
Deposited: 2024-12-12
Authors: Pokharna, A., Krieger, J., Greger, I.
PDB entry 9hpg: The NTD dimer and the interfacing LBD region of the AMPAR complex GluA3(R439G,R163I)- TARP gamma2 in the apo state.
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-12-12
Authors: Pokharna, A., Krieger, J., Greger, I.
PDB entry 9hph: Protein kinase CK2 bound to KDX1381
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2024-12-13
Authors: Krimm, I.
PDB entry 9hpi: Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-12-13
Authors: Langousis, G., Hunkeler, M., Chami, M., Quan, C., Townson, S., Bonenfant, D.
PDB entry 9hpj: Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 2
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-12-13
Authors: Langousis, G., Hunkeler, M., Chami, M., Quan, C., Townson, S., Bonenfant, D.
PDB entry 9hpk: Open state TMD-LBD of the GluA3(R439G) with TARP gamma2
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2024-12-13
Authors: Pokharna, A., Singh, B., Krieger, J.
PDB entry 9hpl: E. coli beta-galactosidase labeled with Chromeo P503 dye purified using MISO
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.3 Å
Deposited: 2024-12-13
Authors: Eluru, G., De Gieter, S., Stroobants, A., Efremov, R.G.
PDB entry 9hpm: E. coli beta-galactosidase labeled with Chromeo P503 dye purified using MISO from 1ug
Classification: HYDROLASE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-12-13
Authors: Eluru, G., De Gieter, S., Stroobants, A., Efremov, R.G.
PDB entry 9hpn: Corynebacterium glutamicum PS2 S-layer
Classification: STRUCTURAL PROTEIN
Source organism: Corynebacterium glutamicum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2024-12-13
Authors: Isbilir, B., Bharat, T.
PDB entry 9hpo: Docedameric RuvBL1/RuvBL2
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-12-13
Authors: Santo, P.E., Plisson-Chastang, C.
PDB entry 9hpp: Helical form of Citropin 1.3
Classification: ANTIMICROBIAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2024-12-13
Authors: Bloch, Y., Rayan, B., Landau, M.
PDB entry 9hpq: Peptide-substrate-binding (PSB) domain of human type I collagen prolyl 4-hydroxylase complexed with Pro-Pro-Gly-Pro-Arg-Gly-Pro-Pro-Gly.
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-12-16
Authors: Sulu, R., Rahman, M.M., Wierenga, R.K., Koski, M.K.
PDB entry 9hps: Human BclxLdeltaLT-VDAC1-N fusion protein complex structure
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-12-16
Authors: Janowski, R., Niessing, D.
PDB entry 9hpt: Crystal structure of OXA-57
Classification: ANTIMICROBIAL PROTEIN
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-12-16
Authors: Bragginton, E.C., Hinchliffe, P., Spencer, J.
PDB entry 9hpu: Crystal structure of OXA-57
Classification: ANTIMICROBIAL PROTEIN
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-16
Authors: Shaw, J.M., Bragginton, E.C., Hinchliffe, P., Spencer, J.
PDB entry 9hpv: Crystal structure of OXA-163 in complex with nacubactam (16 hour soak)
Classification: ANTIMICROBIAL PROTEIN
Source organism: Enterobacter cloacae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2024-12-16
Authors: Hoff, J.F., Goudar, K.E., Hinchliffe, P., Spencer, J.
PDB entry 9hpw: Crystal structure of meropenem bound to OXA-57
Classification: ANTIMICROBIAL PROTEIN
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2024-12-16
Authors: Bragginton, E.C., Hinchliffe, P., Spencer, J.
PDB entry 9hpx: [FeFe]-hydrogenase from D. desulfuricans with synthetic active site containing only one cyanide ligand.
Classification: OXIDOREDUCTASE
Source organism: Desulfovibrio desulfuricans
Experimental method: X-RAY DIFFRACTION
Resolution: 0.96 Å
Deposited: 2024-12-16
Authors: Carr, S.B., Duan, Z., Rodriguez-Macia, P.
PDB entry 9hpy: Crystal structure of avibactam bound to OXA-57
Classification: ANTIMICROBIAL PROTEIN
Source organism: Burkholderia pseudomallei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2024-12-16
Authors: Bragginton, E.C., Hinchliffe, P., Spencer, J.
PDB entry 9hpz: Cryo-EM structure of the wild-type flagellar filament from Roseburia hominis
Classification: STRUCTURAL PROTEIN
Source organism: Roseburia hominis A2-183
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Deposited: 2024-12-16
Authors: Bell, M.E.W., Koch, I., Hipp, K., Hartmann, M.D., Merino, F., Ley, R.E.
PDB entry 9hq0: SARM1 TIR domain in complex with compound 7-ADPR
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2024-12-16
Authors: Giroud, M., Kuhn, B., Steiner, S., Westwood, P., Mendel, M., Mani, A., Pinard, E., Haap, W., Grether, U., Caramenti, P., Rombach, D., Zambaldo, C., Ritter, M., Schmid, P., Gasser, C., Aregger, N., Sechet, N., Topp, A., Bilyard, M., Malnight-Alvarez, A., Plitzko, I., Hilbert, M., Kalayil, S., Burger, D., Bonardi, C., Saal, W., Haider, A., Wittwer, M., Brigo, A., Keaney, J., Benz, J.
PDB entry 9hq1: XusB lipoprotein bound to ferric salmochelin
Classification: METAL TRANSPORT
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-16
Authors: Silale, A., Soo, Y.L., van den Berg, B.
PDB entry 9hq2: 1-Epi-Cubenol Synthase from Nonomuraea coxensis (NcECS): Open State
Classification: LYASE
Source organism: Nonomuraea coxensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-16
Authors: Groll, M., Li, H., Troycke, P., Dickschat, J.S.
PDB entry 9hq3: Crystal structure of human carbonic anhydrase II in complex with N-(2-(benzylamino)-2-oxo-1-(4-sulfamoylphenyl)ethyl)-N-(3-chloro-4-methoxyphenyl)-3-(trimethylsilyl)propiolamide
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-12-16
Authors: Angeli, A., Ferraroni, M.
PDB entry 9hq4: TTLL11 bound to microtubule
Classification: LIGASE
Source organism: Homo sapiens; Pseudomonas pavonaceae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2024-12-16
Authors: Barinka, C., Campbell, J., Desfosses, A., Gutsche, I.
PDB entry 9hq5: Crystal structure of Tetraspanin CD63mutant Large Extracellular Loop (LEL) in complex with sybody SB3
Classification: CELL ADHESION
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-12-16
Authors: Nagarathinam, K., Krey, T.
PDB entry 9hq6: Structural insights in the HuHf@gold-monocarbene adduct: aurophilicity revealed in a biological context
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.51 Å
Deposited: 2024-12-16
Authors: Cosottini, L., Giachetti, A., Guerri, A., Martinez-Castillo, A., Geri, A., Zineddu, S., Abrescia, N.G.A., Messori, L., Turano, P., Rosato, A.
PDB entry 9hq7: Partial (52mer) encapsulin shell assembly from Mycobacterium tuberculosis
Classification: VIRUS LIKE PARTICLE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.51 Å
Deposited: 2024-12-16
Authors: Lewis, C.J., Berger, C., Ravelli, R.B.G.
PDB entry 9hq8: Hypothetical protein from ssRNA Leviviricetes sp bacteriophage metagenome, IMGVR_UViG_3300036404_000292
Classification: VIRAL PROTEIN
Source organism: Leviviricetes
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-12-16
Authors: Balta, I., Sisovs, M., Tars, K.
PDB entry 9hq9: UP1 in complex with Z1401276297
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-12-16
Authors: Dunnett, L., Prischi, F.
PDB entry 9hqa: 1-Epi-Cubenol Synthase from Nonomuraea coxensis (NcECS) in complex with pyrophosphate
Classification: LYASE
Source organism: Nonomuraea coxensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-16
Authors: Groll, M., Li, H., Troycke, P., Dickschat, J.S.
PDB entry 9hqb: 1-Epi-Cubenol Synthase from Nonomuraea coxensis (NcECS) in complex with 2,3-DHFPP
Classification: LYASE
Source organism: Nonomuraea coxensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2024-12-16
Authors: Groll, M., Li, H., Troycke, P., Dickschat, J.S.
PDB entry 9hqc: Partial (54mer) encapsulin shell assembly from Mycobacterium tuberculosis
Classification: VIRUS LIKE PARTICLE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.57 Å
Deposited: 2024-12-16
Authors: Lewis, C.J., Berger, C., Ravelli, R.B.G.
PDB entry 9hqd: T-Muurolol Synthase from Roseiflexus castenholzii (TmS) in complex with 2,3-DHFPP [P2(1)2(1)2(1)]
Classification: LYASE
Source organism: Roseiflexus castenholzii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-12-16
Authors: Groll, M., Li, H., Troycke, P., Dickschat, J.S.
PDB entry 9hqe: Bacteroides fragilis xenosiderophore-binding lipoprotein XusB
Classification: METAL TRANSPORT
Source organism: Bacteroides fragilis NCTC 9343
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2024-12-16
Authors: Silale, A., van den Berg, B.