LiteFold/PDB huggingface dataset:
PDB entry 9fyq: Cryo-EM structure of native SV2A in complex with TeNT-Hc, gangliosides and Pro-Macrobody 5
Classification: MEMBRANE PROTEIN
Source organism: Clostridium tetani E88; Escherichia coli (strain K12); Lama glama; Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2024-07-03
Authors: Schenck, S., Brunner, J.D.
PDB entry 9fyr: Cryo-EM structure of native SV2A in complex with TeNT-Hc, Pro-Macrobody 5 and Levetiracetam
Classification: MEMBRANE PROTEIN
Source organism: Clostridium tetani E88; Escherichia coli K-12; Lama glama; Ovis aries
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-07-03
Authors: Schenck, S., Brunner, J.D.
PDB entry 9fys: D11 mAbs bound to alpha-Bungarotoxin
Classification: TOXIN
Source organism: Bungarus multicinctus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2024-07-03
Authors: Wade, J., Bohn, M.F., Laustsen, A.H., Morth, J.P.
PDB entry 9fyt: mAbs in complex with cobratoxin at pH 4.5
Classification: TOXIN
Source organism: Homo sapiens; Naja kaouthia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-07-03
Authors: Wade, J., Bohn, M.F., Laustsen, A.H., Morth, J.P.
PDB entry 9fyu: Crystal structure of the engineered photoenzyme VEnT1.0
Classification: BIOSYNTHETIC PROTEIN
Source organism: Loligo vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2024-07-04
Authors: Hardy, F.J., Roberts, G.W.
PDB entry 9fyv: Crystal structure of the engineered photoenzyme VEnT1.3
Classification: BIOSYNTHETIC PROTEIN
Source organism: Loligo vulgaris
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2024-07-04
Authors: Hardy, F.J., Roberts, G.W.
PDB entry 9fyw: X-ray structure of the adduct formed upon reaction of RNase A with [Ru2Cl(D-p-CNPhF)(O2CCH3)3]
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-07-04
Authors: Teran, A., Ferraro, G., Merlino, A.
PDB entry 9fyx: Influenza A/H7N9 polymerase pre-cleavage cap-snatching complex
Classification: VIRUS
Source organism: Homo sapiens; Influenza A virus (A/Zhejiang/DTID-ZJU01/2013(H7N9)); Sus scrofa domesticus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-07-04
Authors: Rotsch, A.H., Li, D., Dienemann, C., Cusack, S., Cramer, P.
PDB entry 9fyz: Crystal structure of SusA amylase from Bacteroides thetaiotaomicron covalently bound to alpha-1,6 branched pseudo-trisaccharide activity-based probe
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2024-07-04
Authors: Pickles, I.B., Moroz, O., Davies, G.
PDB entry 9fz0: Crystal structure of SusG from Bacteroides thetaiotaomicron covalently bound to alpha-1,6 branched pseudo-trisaccharide activity-based probe
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2024-07-04
Authors: Pickles, I.B., Moroz, O., Davies, G.
PDB entry 9fz1: UMG-SP3 amidase from uncultured bacterium in complex with 4,4'-MDA
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-07-04
Authors: Rotilio, L., Morth, J.P.
PDB entry 9fz2: Crystal structure of Amylase 5 (Amy5) from Ruminococcus bromii covalently bound to alpha-1,6 branched pseudo-trisaccharide activity-based probe
Classification: HYDROLASE
Source organism: Ruminococcus bromii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-07-04
Authors: Pickles, I.B., Moroz, O., Davies, G.
PDB entry 9fz3: Crystal structure of K38 amylase from Bacillus sp. strain KSM-K38 covalently bound to alpha-1,6 branched pseudo-trisaccharide activity-based probe
Classification: HYDROLASE
Source organism: Bacillus sp. KSM-K38
Experimental method: X-RAY DIFFRACTION
Resolution: 2.02 Å
Deposited: 2024-07-04
Authors: Pickles, I.B., Moroz, O., Davies, G.
PDB entry 9fz4: SARS CoV-2 nsp10 in complex with theExoN domain from nsp14
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44 Å
Deposited: 2024-07-04
Authors: Fisher, S.Z.
PDB entry 9fz5: Cryo-EM structure of LptDE-YedD complex from Escherichia Coli
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.57 Å
Deposited: 2024-07-04
Authors: Nguyen, V.S., Remaut, H., Collet, J.F., Gennaris, A., Thouvenel, L.
PDB entry 9fz6: A 2.58A crystal structure of S. aureus DNA gyrase and DNA with metals identified through anomalous scattering
Classification: ISOMERASE
Source organism: Staphylococcus aureus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2024-07-04
Authors: Morgan, H., Duman, R., Bax, B.D., Warren, A.J.
PDB entry 9fz7: Pseudomonas aeruginosa penicillin binding protein 3 in complex with cefiderocol
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-07-04
Authors: Smith, H.G., Allen, M.D., Basak, S., Aniebok, V., Beech, M.J., Alshref, F.M., Farley, A.J.M., Schofield, C.J.
PDB entry 9fz8: Pseudomonas aeruginosa penicillin binding protein 3
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2024-07-04
Authors: Smith, H.G., Allen, M.D., Basak, S., Aniebok, V., Beech, M.J., Alshref, F.M., Farley, A.J.M., Schofield, C.J.
PDB entry 9fz9: Glycoside Hydrolase Family 157 from Labilibaculum antarcticum, wild type SeMet derivative (LaGH157)
Classification: HYDROLASE
Source organism: Labilibaculum antarcticum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.443 Å
Deposited: 2024-07-04
Authors: Bule, P., Alves, V.D., Carvalho, A.L.
PDB entry 9fza: TEAD1/YAP in complex with a reversible inhibitor N-[(4-phenoxyphenyl)methyl]imidazo[1,2-a]pyridine-3-carboxamide
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.214 Å
Deposited: 2024-07-04
Authors: Musil, D., Freire, F.
PDB entry 9fzb: Human p53 DNA-binding domain bound to DARPin C10-H82R
Classification: DNA BINDING PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2024-07-05
Authors: Yuksel, B., Balourdas, D.I., Muenick, P., Knapp, S., Doetsch, V., Joerger, A.C., Structural Genomics Consortium (SGC)
PDB entry 9fzc: Structure of OmpA-short in complex with nanobody Nb01
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli K-12; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2024-07-05
Authors: Ackle, F., Sorgenfrei, M., Seeger, M.A.
PDB entry 9fzd: Structure of OmpA-long in complex with nanobody Nb39
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-07-05
Authors: Ackle, F., Sorgenfrei, M., Seeger, M.A.
PDB entry 9fze: Pseudomonas aeruginosa penicillin binding protein 3 in complex with meropenem
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-07-05
Authors: Smith, H.G., Allen, M.D., Basak, S., Aniebok, V., Beech, M.J., Alshref, F.M., Farley, A.J.M., Schofield, C.J.
PDB entry 9fzf: Transcriptional repressor NrdR from E. coli, ADP/dATP bound state
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.444 Å
Deposited: 2024-07-05
Authors: Bimai, O., Rozman Grinberg, I., Sjoberg, B.M., Logan, D.T.
PDB entry 9fzg: Crystal structure of the hPXR-LBD in complex with compound JMV7035
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-07-05
Authors: Delfosse, V., Bourguet, W.
PDB entry 9fzh: Crystal structure of the hPXR-LBD in complex with compound JMV6995
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-07-05
Authors: Delfosse, V., Bourguet, W.
PDB entry 9fzi: A new crystal structure of the hPXR-LBD in fusion with an SRC1 co-activator peptide and in complex with SR12813 (P212121 form)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-07-05
Authors: Carivenc, C., Blanc, P., Bourguet, W., Delfosse, V.
PDB entry 9fzj: A new crystal structure of the hPXR-LBD in complex with SR12813 (P43212 form)
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-07-05
Authors: Carivenc, C., Blanc, P., Bourguet, W., Delfosse, V.
PDB entry 9fzk: SARS CoV-2 nsp10 in complex with theExoN domain from nsp14
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-07-05
Authors: Fisher, S.Z.
PDB entry 9fzl: Perkinsus marinus respiratory supercomplex CII2CIII2CIV2 in an intermediate state
Classification: MEMBRANE PROTEIN
Source organism: Perkinsus marinus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2024-07-05
Authors: Wu, F., Amunts, A.
PDB entry 9fzm: helix shuffled variant of domain B pf protein A
Classification: PROTEIN BINDING
Source organism: Staphylococcus aureus
Experimental method: SOLUTION NMR
Deposited: 2024-07-05
Authors: Weininger, U., Bobolowski, H.
PDB entry 9fzn: 25-phosphosteroid lyase (25-PSL)
Classification: LYASE
Source organism: Sterolibacterium denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-07-05
Authors: Ermler, U., Boll, M., Demmer, U., Jacoby, C.
PDB entry 9fzo: Pseudomonas aeruginosa penicillin binding protein 3 in complex with ceftazidime
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-07-05
Authors: Smith, H.G., Allen, M.D., Basak, S., Aniebok, V., Beech, M.J., Alshref, F.M., Farley, A.J.M., Schofield, C.J.
PDB entry 9fzp: Pseudomonas aeruginosa penicillin binding protein 3 in complex with cefepime
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-07-05
Authors: Smith, H.G., Allen, M.D., Basak, S., Aniebok, V., Beech, M.J., Alshref, F.M., Farley, A.J.M., Schofield, C.J.
PDB entry 9fzq: Proton conductance by human uncoupling protein 1 is inhibited by both purine and pyrimidine nucleotides
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2024-07-05
Authors: Jones, S.A., Sowton, A.P., Lacabanne, D., King, M.S., Palmer, S.M., Zogg, T., Pardon, E., Steyaert, J., Ruprecht, J.J., Kunji, E.R.S.
PDB entry 9fzr: Wild-type EGFR in covalent complex with Poziotinib analogue
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.991 Å
Deposited: 2024-07-05
Authors: Anthony, N., Pintar, S., Noble, M.E.N., Martin, M.P.
PDB entry 9fzs: Wild-type EGFR in complex with non-covalent poziotinib analogue
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.121 Å
Deposited: 2024-07-05
Authors: Anthony, N., Pintar, S., Martin, M.P., Noble, M.E.N.
PDB entry 9fzt: The structure of Candida albicans phosphoglucose isomerase in complex with fructose-6-phosphate
Classification: ISOMERASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2024-07-05
Authors: Yan, K., Raimi, O.G., Grillenberger, S.
PDB entry 9fzv: Structure of cathepsin B1 from Schistosoma mansoni (SmCB1) in complex with a carborane inhibitor
Classification: HYDROLASE
Source organism: Schistosoma mansoni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-07-06
Authors: Jilkova, A., Fanfrlik, J., Brynda, J., Spiwokova, P., Horn, M., Holub, J., Guetschow, M., Mares, M.
PDB entry 9fzw: Structure of Urethanase UMG-SP2
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2024-07-06
Authors: Singh, P., Lennartz, F., Bornscheuer, U.T., Wei, R., Weber, G.
PDB entry 9fzx: Rhizobium phage ligase
Classification: LIGASE
Source organism: Rhizobium phage 16-3; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.196 Å
Deposited: 2024-07-06
Authors: Rothweiler, U., Williamson, A.
PDB entry 9fzy: Structure of carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) in complex with corrinoid iron-sulfur protein (CoFeSP) from Clostridium autoethanogenum (composite structure, class 3A)
Classification: OXIDOREDUCTASE
Source organism: Clostridium autoethanogenum DSM 10061
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2024-07-06
Authors: Yin, M.D., Lemaire, O.N., Wagner, T., Murphy, B.J.
PDB entry 9fzz: Structure of carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) in complex with corrinoid iron-sulfur protein (CoFeSP) from Clostridium autoethanogenum (composite structure, class 3B)
Classification: OXIDOREDUCTASE
Source organism: Clostridium autoethanogenum DSM 10061
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å
Deposited: 2024-07-06
Authors: Yin, M.D., Lemaire, O.N., Wagner, T., Murphy, B.J.
PDB entry 9g00: Structure of carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) in complex with corrinoid iron-sulfur protein (CoFeSP) from Clostridium autoethanogenum (composite structure, class 3Cb)
Classification: OXIDOREDUCTASE
Source organism: Clostridium autoethanogenum DSM 10061
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.88 Å
Deposited: 2024-07-06
Authors: Yin, M.D., Lemaire, O.N., Wagner, T., Murphy, B.J.
PDB entry 9g01: Structure of carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) from Clostridium autoethanogenum (composite structure, closed and CO-bound state)
Classification: OXIDOREDUCTASE
Source organism: Clostridium autoethanogenum DSM 10061
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-07-06
Authors: Yin, M.D., Lemaire, O.N., Wagner, T., Murphy, B.J.
PDB entry 9g02: Structure of carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) from Clostridium autoethanogenum (composite structure, semi-extended state)
Classification: OXIDOREDUCTASE
Source organism: Clostridium autoethanogenum DSM 10061
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.29 Å
Deposited: 2024-07-06
Authors: Yin, M.D., Lemaire, O.N., Wagner, T., Murphy, B.J.
PDB entry 9g03: Structure of carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) in complex with ferredoxin (Clostridium autoethanogenum)
Classification: OXIDOREDUCTASE
Source organism: Clostridium autoethanogenum DSM 10061
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.1 Å
Deposited: 2024-07-06
Authors: Yin, M.D., Lemaire, O.N., Wagner, T., Murphy, B.J.
PDB entry 9g04: Structure of MadB, a class I dehydrates from Clostridium maddingley in the apo state
Classification: BIOSYNTHETIC PROTEIN
Source organism: Clostridium sp. Maddingley MBC34-26
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-07-06
Authors: Knospe, C.V., Ortiz, J., Reiners, J., Kedrov, A., Gertzen, C., Smits, S.H.J., Schmitt, L.
PDB entry 9g05: Structure of MadB, a class I dehydrates from Clostridium maddingley, in complex with its substrate
Classification: BIOSYNTHETIC PROTEIN
Source organism: Clostridium sp. Maddingley MBC34-26; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.13 Å
Deposited: 2024-07-07
Authors: Knospe, C.V., Ortiz, J., Reiners, J., Kedrov, A., Gerten, C., Smits, S.H.J., Schmitt, L.
PDB entry 9g06: Structure of 30S-IF1-IF3-mRNA-fMet-tRNA-GE81112A complex
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-07-07
Authors: Safdari, H.A., Morici, M., Wilson, D.N.
PDB entry 9g07: The structure of Candida albicans phosphoglucose isomerase in complex with a fragment
Classification: ISOMERASE
Source organism: Candida albicans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2024-07-07
Authors: Yan, K.
PDB entry 9g08: Structure of human RNF213 bound to the secreted effector IpaH1.4 from Shigella flexneri
Classification: ANTIMICROBIAL PROTEIN
Source organism: Homo sapiens; Shigella flexneri 5a str. M90T
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-07-07
Authors: Naydenova, K., Randow, F.
PDB entry 9g09: Structure of human RNF213 bound to the secreted effector IpaH2.5 from Shigella flexneri
Classification: ANTIMICROBIAL PROTEIN
Source organism: Homo sapiens; Shigella flexneri 5a str. M90T
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-07-07
Authors: Naydenova, K., Randow, F.
PDB entry 9g0a: Influenza A/H7N9 polymerase post-cleavage cap-snatching complex
Classification: VIRUS
Source organism: Homo sapiens; Influenza A virus (A/Zhejiang/DTID-ZJU01/2013(H7N9)); Sus scrofa domesticus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-07-07
Authors: Rotsch, A.H., Li, D., Dienemann, C., Cusack, S., Cramer, P.
PDB entry 9g0b: Rhinovirus A2 uncoating intermediate revealing the natural pocket factor (pH 5.8 and 4 degrees Celsius)
Classification: VIRUS
Source organism: rhinovirus A2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-07-07
Authors: Real-Hohn, A., Blaas, D.
PDB entry 9g0c: Structure of human Mical1 bMERB_V978A_V985A domain:Rab10 complex.
Classification: ENDOCYTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-07-08
Authors: Rai, A., Goody, R.S.
PDB entry 9g0d: Structure of human Mical1 bMERB_V978A domain:Rab10 complex.
Classification: ENDOCYTOSIS
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2024-07-08
Authors: Rai, A., Goody, R.S.
PDB entry 9g0f: CryoEM structure of PmcTnsC-dsDNA-AMPPNP
Classification: DNA BINDING PROTEIN
Source organism: Peltigera membranacea; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2024-07-08
Authors: Finocchio, G., Chanez, C., Querques, I., Speichert, K.J., Jinek, M.
PDB entry 9g0g: BsCdaA in complex with Compound 7
Classification: TRANSFERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-07-08
Authors: Neumann, P., Ficner, R.
PDB entry 9g0h: Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the noncovalently bound inhibitor C5N17A
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-07-08
Authors: Yang, C.-C., Strater, N., Sylvester, K., Muller, C.E., Yang, M., Lee, M.K., Gao, S., Song, L., Liu, X., Kim, M., Zhan, P.
PDB entry 9g0i: Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the noncovalently bound inhibitor C5N17B
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-07-08
Authors: Yang, C.-C., Strater, N., Sylvester, K., Muller, C.E., Yang, M., Lee, M.K., Gao, S., Song, L., Liu, X., Kim, M., Zhan, P.
PDB entry 9g0j: Structure of the PRO-PRO endopeptidase (PPEP-3) from Geobacillus thermodenitrificans
Classification: HYDROLASE
Source organism: Geobacillus thermodenitrificans NG80-2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-07-08
Authors: Claushuis, B., Wojtalla, F., van Leeuwen, H., Corver, J., Baumann, U., Hensbergen, P.
PDB entry 9g0k: CysG(N-16) in complex with SAH (metal free, cocrystallization in presence of EDTA) from Kitasatospora cystarginea
Classification: TRANSFERASE
Source organism: Kitasatospora cystarginea
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-07-08
Authors: Kuttenlochner, W., Beller, P., Kaysser, L., Groll, M.
PDB entry 9g0l: Crystal structure of the RING-ZnF1 fragment of SIAH1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-07-08
Authors: Coste, F., Suskiewicz, M.J.
PDB entry 9g0m: Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 288K
Classification: DE NOVO PROTEIN
Source organism: Heloderma suspectum
Experimental method: SOLUTION NMR
Deposited: 2024-07-08
Authors: Horvath, D.
PDB entry 9g0n: Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 299K
Classification: DE NOVO PROTEIN
Source organism: Heloderma suspectum
Experimental method: SOLUTION NMR
Deposited: 2024-07-08
Authors: Horvath, D.
PDB entry 9g0o: Xenopus borealis undecorated microtubule - 14 protofilament, 3-start helix
Classification: PROTEIN FIBRIL
Source organism: Xenopus borealis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-07-08
Authors: Troman, L.A., Moores, C.A.
PDB entry 9g0p: Xenopus laevis undecorated microtubule - 14 protofilament, 3-start helix
Classification: PROTEIN FIBRIL
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-07-08
Authors: Troman, L.A., Moores, C.A.
PDB entry 9g0q: Xenopus laevis undecorated microtubule - 15 protofilament, 3-start helix
Classification: PROTEIN FIBRIL
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-07-08
Authors: Troman, L.A., Moores, C.A.
PDB entry 9g0r: Xenopus laevis undecorated microtubule - 15 protofilament, 4-start helix
Classification: PROTEIN FIBRIL
Source organism: Xenopus laevis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-07-08
Authors: Troman, L.A., Moores, C.A.
PDB entry 9g0s: Xenopus tropicalis undecorated microtubule - 14 protofilament, 3-start helix
Classification: PROTEIN FIBRIL
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-07-08
Authors: Troman, L.A., Moores, C.A.
PDB entry 9g0t: Xenopus tropicalis undecorated microtubule - 15 protofilament, 3-start helix
Classification: PROTEIN FIBRIL
Source organism: Xenopus tropicalis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-07-08
Authors: Troman, L.A., Moores, C.A.
PDB entry 9g0u: Human LTC4 synthase in complex with AZD9898
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-07-08
Authors: Srinivas, H.
PDB entry 9g0v: Human LTC4 synthase in complex with compound 1
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.784 Å
Deposited: 2024-07-08
Authors: Srinivas, H.
PDB entry 9g0w: auxin transporter PIN8 as asymmetric dimer (inward/outward) with 2,4-D bound in the inward vestibule prebinding state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.54 Å
Deposited: 2024-07-09
Authors: Ung, K.L., Stokes, D.L., Pedersen, B.P.
PDB entry 9g0x: auxin transporter PIN8 as asymmetric dimer (inward/outward) with 4-CPA bound in the inward vestibule prebinding state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2024-07-09
Authors: Ung, K.L., Stokes, D.L., Pedersen, B.P.
PDB entry 9g0y: Human KRas4A (GDP) in complex with compound 11
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2024-07-09
Authors: Schuettelkopf, A.W.
PDB entry 9g0z: auxin transporter PIN8 as symmetric dimer (outward/outward) with 4-CPA bound in the outward binding state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.31 Å
Deposited: 2024-07-09
Authors: Ung, K.L., Stokes, D.L., Pedersen, B.P.
PDB entry 9g10: auxin transporter PIN8 as asymmetric dimer (outward/inward) with 4-CPA bound in the outward partly released state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.43 Å
Deposited: 2024-07-09
Authors: Ung, K.L., Stokes, D.L., Pedersen, B.P.
PDB entry 9g11: sugar/H+ symporter STP6 in inward occluded conformation with glucose bound
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2024-07-09
Authors: Andersen, C.G., Bavnhoej, L., Pedersen, B.P.
PDB entry 9g12: Mycobacterium tuberculosis RelBE1 toxin-antitoxin system; rv1247c (relB1 antitoxin), rv1246c (relE1 toxin)
Classification: TOXIN
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-07-09
Authors: Beck, I.N., Blower, T.R.
PDB entry 9g13: VHH H3-2 in complex with Tau C-terminal peptide
Classification: IMMUNE SYSTEM
Source organism: Lama glama; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-07-09
Authors: Dupre, E., Landrieu, I., Danis, C., Hanoulle, X., Mortelecque, J.
PDB entry 9g14: Human LTC4 synthase in complex with compound 2
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2024-07-09
Authors: Srinivas, H.
PDB entry 9g15: Crystal structure of marine actinobacteria clade rhodopsin (MAR) in the O* state, pH 8.8
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Actinomarina minuta; marine Actinobacteria clade
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-07-09
Authors: Bukhdruker, S., Kovalev, K., Astashkin, R., Gordeliy, V.
PDB entry 9g16: Crystal structure of marine actinobacteria clade rhodopsin (MAR) in the O state obtained by cryotrapping
Classification: MEMBRANE PROTEIN
Source organism: Candidatus Actinomarina minuta; marine Actinobacteria clade
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2024-07-09
Authors: Bukhdruker, S., Kovalev, K., Astashkin, R., Gordeliy, V.
PDB entry 9g17: Structure of PslG with a covalently- bound pentasaccharide
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-07-09
Authors: Offen, W.A., Davies, G.J.
PDB entry 9g18: Structure of PslG with an iminosugar inhibitor
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-07-09
Authors: Offen, W.A., Davies, G.J.
PDB entry 9g19: Structure of the Nothoceros aenigmaticus LFY DNA-binding domain bound to DNA
Classification: GENE REGULATION
Source organism: Nothoceros aenigmaticus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.092 Å
Deposited: 2024-07-09
Authors: Zubieta, C., Verhage, L., Nanao, M.H., Parcy, F.
PDB entry 9g1a: Fragment screening of FosAKP, room-temperature structure, ground state
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1b: Fragment screening of FosAKP, room-temperature structure in complex with fragment F2X-entry A09
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1c: Fragment screening of FosAKP, room-temperature structure in complex with fragment F2X-entry A12
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1d: Fragment screening of FosAKP, room-temperature structure in complex with fragment F2X-entry E04
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1e: Fragment screening of FosAKP, room-temperature structure in complex with fragment F2X-entry E07
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1f: Fragment screening of FosAKP, room-temperature structure in complex with fragment F2X-entry E12
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1g: Fragment screening of FosAKP, room-temperature structure in complex with fragment F2X-entry G08
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1h: Fragment screening of FosAKP, room-temperature structure in complex with fragment F2X-entry H01
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1i: Fragment screening of FosAKP, cryo structure, ground state
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1j: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry A06
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1k: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry A09
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1l: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry A12
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1m: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry B02
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1n: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry E04
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1o: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry E07
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1p: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry E12
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.14 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1q: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry G08
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1r: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry G12
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1s: Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry H01
Classification: TRANSFERASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.12 Å
Deposited: 2024-07-10
Authors: Guenther, S., Galchenkova, M., Fischer, P., Reinke, P.Y.A., Falke, S., Thekku Veedu, S., Rodrigues, A.C., Senst, J., Meents, A.
PDB entry 9g1t: Human LTC4 synthase in complex with compound 5
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2024-07-10
Authors: Srinivas, H.
PDB entry 9g1v: Yeast RNA polymerase I elongation complex stalled by an apurinic site
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-07-10
Authors: Santos-Aledo, A., Plaza-Pegueroles, A., Ruiz, F.M., Fernandez-Tornero, C.
PDB entry 9g1w: NMR solution structure of the Thermus thermophilus PilF-GSPIIA domain
Classification: MOTOR PROTEIN
Source organism: Thermus thermophilus HB27
Experimental method: SOLUTION NMR
Deposited: 2024-07-10
Authors: Neissner, K., Woehnert, J., Hacker, C.
PDB entry 9g1x: Yeast RNA polymerase I elongation complex stalled by an apurinic site, 11-subunit
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-07-10
Authors: Santos-Aledo, A., Plaza-Pegueroles, A., Ruiz, F.M., Fernandez-Tornero, C.
PDB entry 9g1y: Staphycoccus aureus MazF in complex with Nabobody 3
Classification: TOXIN
Source organism: Lama glama; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69655 Å
Deposited: 2024-07-10
Authors: Zorzini, V., Haesaerts, S., Loris, R.
PDB entry 9g1z: Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
Classification: RIBOSOME
Source organism: Candida albicans SC5314
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-07-10
Authors: Kolosova, O., Zgadzay, Y., Stetsenko, A., Atamas, A., Jenner, L.B., Guskov, A., Yusupov, M.
PDB entry 9g20: Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 310K
Classification: DE NOVO PROTEIN
Source organism: Heloderma suspectum
Experimental method: SOLUTION NMR
Deposited: 2024-07-10
Authors: Horvath, D.
PDB entry 9g21: Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bER) at 321K
Classification: DE NOVO PROTEIN
Source organism: Heloderma suspectum
Experimental method: SOLUTION NMR
Deposited: 2024-07-10
Authors: Horvath, D.
PDB entry 9g22: Trp-cage fortified Tc5b-Exenatide chimera (Ex4-Tc5bDR) at 277K
Classification: DE NOVO PROTEIN
Source organism: Heloderma suspectum
Experimental method: SOLUTION NMR
Deposited: 2024-07-10
Authors: Horvath, D.
PDB entry 9g23: Yeast RNA polymerase I elongation complex stalled by an apurinic site bound to nucleotide analog AMPCPP at A-site
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-07-10
Authors: Santos-Aledo, A., Plaza-Pegueroles, A., Ruiz, F.M., Fernandez-Tornero, C.
PDB entry 9g24: Yeast RNA polymerase I elongation complex stalled by an apurinic site bound to nucleotide analog AMPCPP at E-site
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-07-10
Authors: Santos-Aledo, A., Plaza-Pegueroles, A., Ruiz, F.M., Fernandez-Tornero, C.
PDB entry 9g25: snR30 snoRNP - State 1 - Utp23-Krr1-deltaC3
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-07-10
Authors: Thoms, M., Berninghausen, O., Beckmann, R.
PDB entry 9g26: Yeast RNA polymerase I elongation complex stalled by an apurinic site, closed state
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-07-10
Authors: Santos-Aledo, A., Plaza-Pegueroles, A., Ruiz, F.M., Fernandez-Tornero, C.
PDB entry 9g27: Yeast RNA polymerase I elongation complex stalled by an apurinic site, pre-translocation state
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-07-10
Authors: Santos-Aledo, A., Plaza-Pegueroles, A., Ruiz, F.M., Fernandez-Tornero, C.
PDB entry 9g28: snR30 snoRNP - State 2 - Utp23-Krr1-deltaC3
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.18 Å
Deposited: 2024-07-10
Authors: Thoms, M., Berninghausen, O., Beckmann, R.
PDB entry 9g29: Yeast RNA polymerase I elongation complex stalled by an apurinic site with the C-terminal of A12 in the funnel
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-07-10
Authors: Santos-Aledo, A., Plaza-Pegueroles, A., Ruiz, F.M., Fernandez-Tornero, C.
PDB entry 9g2a: Staphylococcus aureus MazF in complex with nanobody 4
Classification: TOXIN
Source organism: Lama glama; Staphylococcus aureus subsp. aureus N315
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04659 Å
Deposited: 2024-07-10
Authors: Prolic-Kalinsek, M., Zorzini, V., Haesaerts, S., Loris, R.
PDB entry 9g2b: Yeast RNA polymerase I elongation complex stalled by an apurinic site, 12-subunit
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-07-10
Authors: Santos-Aledo, A., Plaza-Pegueroles, A., Ruiz, F.M., Fernandez-Tornero, C.
PDB entry 9g2c: Yeast RNA polymerase I elongation complex stalled by an apurinic site, open state
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-07-10
Authors: Santos-Aledo, A., Plaza-Pegueroles, A., Ruiz, F.M., Fernandez-Tornero, C.
PDB entry 9g2d: Cryo-EM structure of the beta3 homomeric GABA(A) receptor in the long-lived resting state (C5) sprayed with PBS
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-07-10
Authors: Mihaylov, D.B., Malinauskas, T., Aricescu, A.R.
PDB entry 9g2e: Cryo-EM structure of the beta3 homomeric GABA(A) receptor in the long-lived desensitised state (C5) sprayed with PBS
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-07-10
Authors: Mihaylov, D.B., Malinauskas, T., Aricescu, A.R.
PDB entry 9g2f: Mouse Teneurin2 dimer variant A1B1
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-07-10
Authors: Berbeira-Santana, M., Zhou, J.C., el Omari, K., Baker, L., Seiradake, E.
PDB entry 9g2g: Staphylococcus aureus MazF in complex with nanobody 5
Classification: TOXIN
Source organism: Lama glama; Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.80048 Å
Deposited: 2024-07-10
Authors: Prolic-Kalinsek, M., Zorzini, V., Haesaerts, S., Loris, R.
PDB entry 9g2h: Mouse Teneurin2 dimer variant A1B0
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2024-07-10
Authors: Berbeira-Santana, M., Zhou, J.C., el Omari, K., Baker, L., Seiradake, E.
PDB entry 9g2i: 25-phosphosteroid lyase + phosphate
Classification: LYASE
Source organism: Sterolibacterium denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-07-11
Authors: Ermler, U., Boll, M., Demmer, U., Jacoby, C.
PDB entry 9g2j: Thaumatin structure determined using SoS chip at ID29 (serial crystallography)
Classification: PLANT PROTEIN
Source organism: Thaumatococcus daniellii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2024-07-11
Authors: Doak, R.B., Shoeman, R.L., Gorel, A., Barends, T.R.M., Schlichting, I.
PDB entry 9g2k: Cryo-EM structure of IrtAB in outward-occluded state in nanodisc in complex with ADP-vanadate
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g2l: Cryo-EM structure of IrtAB in inward-facing state in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g2m: Cryo-EM structure of IrtAB in outward-occluded state in LMNG in complex with ADP-vanadate
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.23 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g2n: Trp-cage fortified Tc5b-Exenatide chimera ( Ex-4-Tc5bDR) at 288K
Classification: DE NOVO PROTEIN
Source organism: Heloderma suspectum
Experimental method: SOLUTION NMR
Deposited: 2024-07-11
Authors: Horvath, D.
PDB entry 9g2o: Trp-cage fortified Tc5b-Exenatide chimera (Ex-4-Tc5bDR) at 299K
Classification: DE NOVO PROTEIN
Source organism: Heloderma suspectum
Experimental method: SOLUTION NMR
Deposited: 2024-07-11
Authors: Horvath, D.
PDB entry 9g2p: Cryo-EM structure of IrtAB 2xEQ mutant in outward-occluded state in nanodisc
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g2r: Endophilin B1 dimers bound to nanodiscs
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2024-07-11
Authors: Thorlacius, A., Sundborger-Lunna, A.
PDB entry 9g2s: Cryo-EM structure of IrtAB 2xEQ, Q249R_IrtB mutant in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g2t: Cryo-EM structure of IrtAB 2xEQ, A256R_IrtB mutant in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g2u: Endophilin B1 dimer bound to nanodisc center
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2024-07-11
Authors: Thorlacius, A., Sundborger-Lunna, A.
PDB entry 9g2v: Cryo-EM structure of IrtAB in inward-facing state in presence of mycobactin under turnover conditions in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g2w: Endophilin B1 dimer bound to nanodisc edge
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-07-11
Authors: Thorlacius, A., Sundborger-Lunna, A.
PDB entry 9g2x: Cryo-EM structure of IrtAB in outward-occluded state in presence of mycobactin under turnover conditions in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g2y: Cryo-EM structure of IrtAB in inward-facing state under turnover conditions in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g2z: Cryo-EM structure of IrtAB in outward-occluded state under turnover conditions in LMNG
Classification: MEMBRANE PROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.78 Å
Deposited: 2024-07-11
Authors: Gonda, I., Seeger, M.A.
PDB entry 9g30: The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) shows strong density for the A site tRNA
Classification: RIBOSOME
Source organism: Candida albicans
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.35 Å
Deposited: 2024-07-11
Authors: Kolosova, O., Zgadzay, Y., Jenner, L.B., Guskov, A., Yusupov, M.
PDB entry 9g31: Trp-cage fortified Tc5b-Exenatide chimera (Ex-4-Tc5bDR) at 310K
Classification: DE NOVO PROTEIN
Source organism: Heloderma suspectum
Experimental method: SOLUTION NMR
Deposited: 2024-07-11
Authors: Horvath, D.
PDB entry 9g32: Trp-cage fortified Tc5b-Exenatide chimera (Ex-4-Tc5bDR) at 321K
Classification: DE NOVO PROTEIN
Source organism: Heloderma suspectum
Experimental method: SOLUTION NMR
Deposited: 2024-07-11
Authors: Horvath, D.
PDB entry 9g33: Stalled 90S - Utp23-Krr1-deltaC3
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-07-11
Authors: Thoms, M., Berninghausen, O., Beckmann, R.
PDB entry 9g34: The HIV protease inhibitor darunavir binding to the active site of Cryphonectria parasitica endothiapepsin
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-07-11
Authors: Falke, S., Senst, J.M., Guenther, S., Meents, A.
PDB entry 9g35: The HIV protease inhibitor lopinavir binding to the active site of Cryphonectria parasitica endothiapepsin
Classification: HYDROLASE
Source organism: Cryphonectria parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-07-11
Authors: Falke, S., Senst, J.M., Guenther, S., Meents, A.