LiteFold/PDB huggingface dataset:
PDB entry 6xaq: Alpha-methyl-glucose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
Classification: SUGAR BINDING PROTEIN
Source organism: Marinomonas primoryensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-06-04
Authors: Guo, S., Davies, P.L.
PDB entry 6xar: Structure of CBL tyrosine kinase binding domain (TKBD) with C-terminal tail of Src-like kinase protein 2 (SLAP2)
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2020-06-04
Authors: Wybenga-Groot, L.E., McGlade, C.J.
PDB entry 6xas: CryoEM Structure of E. coli Rho-dependent Transcription Pre-termination Complex
Classification: TRANSCRIPTION
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2020-06-04
Authors: Hao, Z.T., Kim, H.K., Walz, T., Nudler, E.
PDB entry 6xat: Crystal structure of the human FoxP4 DNA binding Domain
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-06-04
Authors: VIllalobos, P., Castro-Fernandez, V., Medina, E., Gonzalez-Ordenes, F., Maturana, P., Herrera-Morande, A., Ramirez-Sarmiento, C.A., Babul, J.
PDB entry 6xau: Structure of the PR domain from PRDM3
Classification: TRANSCRIPTION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2020-06-04
Authors: Loa, S., Mou, T.C., Sprang, S.R., Briknarova, K.
PDB entry 6xav: CryoEM Structure of E. coli Rho-dependent Transcription Pre-termination Complex bound with NusG
Classification: TRANSCRIPTION
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.7 Å
Deposited: 2020-06-04
Authors: Hao, Z.T., Kim, H.K., Walz, T., Nudler, E.
PDB entry 6xaw: Crystal Structure Analysis of SIN3-UME6
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.84 Å
Deposited: 2020-06-04
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 6xax: Structure of a fragment of human fibronectin containing the 11th type III domain, extra domain A, and the 12th type III domain
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-06-04
Authors: Mou, T.C., Nepomuceno, P.A., Sprang, S.R., Briknarova, K.
PDB entry 6xay: Structure of a fragment of human fibronectin containing the 10th, 11th and 12th type III domains
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2020-06-05
Authors: Mou, T.C., Nepomuceno, P.A., Sprang, S.R., Briknarova, K.
PDB entry 6xaz: Structure of the PR domain from human PRDM5
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-06-05
Authors: Mou, T.C., Kerchner, K.M., Sprang, S.R., Briknarova, K.
PDB entry 6xb0: Room temperature X-ray crystallography reveals catalytic cysteine in the SARS-CoV-2 3CL Mpro is highly reactive: Insights for enzyme mechanism and drug design
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-05
Authors: Kneller, D.W., Kovalevsky, A., Coates, L.
PDB entry 6xb1: Room temperature X-ray crystallography reveals catalytic cysteine in the SARS-CoV-2 3CL Mpro is highly reactive: Insights for enzyme mechanism and drug design
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-05
Authors: Kneller, D.W., Kovalevsky, A., Coates, L.
PDB entry 6xb2: Room temperature X-ray crystallography reveals catalytic cysteine in the SARS-CoV-2 3CL Mpro is highly reactive: Insights for enzyme mechanism and drug design
Classification: VIRAL PROTEIN, HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-06-05
Authors: Kneller, D.W., Kovalevsky, A., Coates, L.
PDB entry 6xb3: Structure of AcNPV poxin in post-reactive state with Gp[2'-5']Ap[3']
Classification: HYDROLASE
Source organism: Autographa californica nuclear polyhedrosis virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-05
Authors: Eaglesham, J.B., McCarty, K.L., Kranzusch, P.J.
PDB entry 6xb4: Structure of PrGV poxin in post-reactive state with Gp[2'-5']Ap[3']
Classification: HYDROLASE
Source organism: Pieris rapae granulovirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-05
Authors: Eaglesham, J.B., McCarty, K.L., Kranzusch, P.J.
PDB entry 6xb5: Structure of Trichoplusia ni poxin in post-reactive state with Gp[2'-5']Ap[3']
Classification: HYDROLASE
Source organism: Trichoplusia ni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-06-05
Authors: Eaglesham, J.B., McCarty, K.L., Kranzusch, P.J.
PDB entry 6xb6: Structure of Danaus plexippus poxin cGAMP nuclease
Classification: HYDROLASE
Source organism: Danaus plexippus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-06-05
Authors: Eaglesham, J.B., McCarty, K.L., Kranzusch, P.J.
PDB entry 6xb7: IRES-targeting Small Molecule Inhibits Enterovirus 71 Replication via Allosteric Stabilization of a Ternary Complex
Classification: RNA
Experimental method: SOLUTION NMR
Deposited: 2020-06-05
Authors: Tolbert, B.S., Davila, J., Sugarman, A.L., Chiu, L.Y.
PDB entry 6xb8: Adeno-Associated Virus Origin Binding Domain in complex with ssDNA
Classification: VIRAL PROTEIN
Source organism: Adeno-associated virus 2 (isolate Srivastava/1982); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2020-06-05
Authors: Escalante, C.R., Musayev, F.N.
PDB entry 6xb9: Crystal structure of Azotobacter vinelandii 3-mercaptopropionic acid dioxygenase in complex with 3-hydroxypropionic acid
Classification: OXIDOREDUCTASE
Source organism: Azotobacter vinelandii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2020-06-05
Authors: Kiser, P.D., Khadka, N., Shi, W., Pierce, B.S.
PDB entry 6xbb: Crystal structure of Streptomyces sviceus SsDesB in complex with NADP+
Classification: FLAVOPROTEIN
Source organism: Streptomyces sviceus ATCC 29083
Experimental method: X-RAY DIFFRACTION
Resolution: 2.366 Å
Deposited: 2020-06-05
Authors: Lountos, G.T., Giddings, L.A., Waugh, D.S.
PDB entry 6xbc: Crystal structure of Streptomyces sviceus SsDesB
Classification: FLAVOPROTEIN
Source organism: Streptomyces sviceus ATCC 29083
Experimental method: X-RAY DIFFRACTION
Resolution: 2.863 Å
Deposited: 2020-06-05
Authors: Lountos, G.T., Giddings, L.A., Waugh, D.S.
PDB entry 6xbd: Cryo-EM structure of MlaFEDB in nanodiscs with phospholipid substrates
Classification: LIPID TRANSPORT
Source organism: Escherichia coli DEC6A; Escherichia coli K-12; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2020-06-05
Authors: Coudray, N., Isom, G.L., MacRae, M.R., Saiduddin, M., Ekiert, D.C., Bhabha, G.
PDB entry 6xbe: Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-1F
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Klebsiella pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-05
Authors: Worrall, L.J., Sun, T., Mulligan, V.K., Strynadka, N.C.J.
PDB entry 6xbf: Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-1G
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Klebsiella pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-06-05
Authors: Worrall, L.J., Sun, T., Mulligan, V.K., Strynadka, N.C.J.
PDB entry 6xbg: Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor UAW246
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2020-06-05
Authors: Sacco, M., Ma, C., Wang, J., Chen, Y.
PDB entry 6xbh: Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor UAW247
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-06-06
Authors: Sacco, M., Ma, C., Wang, J., Chen, Y.
PDB entry 6xbi: Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor UAW248
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-06-06
Authors: Sacco, M., Ma, C., Wang, J., Chen, Y.
PDB entry 6xbj: Structure of human SMO-D384R complex with Gi
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2020-06-06
Authors: Qi, X., Long, T., Li, X.
PDB entry 6xbk: Structure of human SMO-G111C/I496C complex with Gi
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.24 Å
Deposited: 2020-06-06
Authors: Qi, X., Long, T., Li, X.
PDB entry 6xbl: Structure of human SMO-Gi complex with SAG
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.96 Å
Deposited: 2020-06-06
Authors: Qi, X., Li, X.
PDB entry 6xbm: Structure of human SMO-Gi complex with 24(S),25-EC
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2020-06-06
Authors: Qi, X., Long, T., Li, X.
PDB entry 6xbo: X-ray crystal structure of the mouse CMP-Sialic acid transporter in complex with 5-methyl CMP
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-06
Authors: Ahuja, S., Whorton, M.R.
PDB entry 6xbq: Streptomyces coelicolor methylmalonyl-CoA epimerase in complex with carboxy-carba(dethia)-CoA
Classification: ISOMERASE/INHIBITOR
Source organism: Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-06-07
Authors: Stunkard, L.M., Boram, T.J., Benjamin, A.B., Bower, J.B., Lohman, J.R.
PDB entry 6xbr: Streptomyces coelicolor methylmalonyl-CoA epimerase (E43L) in complex with 2-nitronate-propionyl-CoA
Classification: ISOMERASE/INHIBITOR
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-06-07
Authors: Stunkard, L.M., Boram, T.J., Benjamin, A.B., Bower, J.B., Lohman, J.R.
PDB entry 6xbs: Streptomyces coelicolor methylmalonyl-CoA epimerase (E43Q) in complex with 2-nitronate-propionyl-CoA
Classification: ISOMERASE/INHIBITOR
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-06-07
Authors: Stunkard, L.M., Boram, T.J., Benjamin, A.B., Bower, J.B., Lohman, J.R.
PDB entry 6xbt: Streptomyces coelicolor methylmalonyl-CoA epimerase (Q60A) in complex with 2-nitronate-propionyl-CoA
Classification: ISOMERASE/INHIBITOR
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2020-06-07
Authors: Stunkard, L.M., Boram, T.J., Benjamin, A.B., Bower, J.B., Lohman, J.R.
PDB entry 6xbu: polymerase domain of polymerase-theta
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.29 Å
Deposited: 2020-06-07
Authors: Chen, X., Pomerantz, R., Zhao, J.
PDB entry 6xbv: Streptomyces coelicolor methylmalonyl-CoA epimerase (S115T) in complex with 2-nitronate-propionyl-CoA
Classification: ISOMERASE/INHIBITOR
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-06-07
Authors: Stunkard, L.M., Boram, T.J., Benjamin, A.B., Bower, J.B., Lohman, J.R.
PDB entry 6xbw: Cryo-EM structure of V-ATPase from bovine brain, state 1
Classification: PROTON TRANSPORT
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.37 Å
Deposited: 2020-06-07
Authors: Wang, R., Li, X.
PDB entry 6xby: Cryo-EM structure of V-ATPase from bovine brain, state 2
Classification: PROTON TRANSPORT
Source organism: Bos taurus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.79 Å
Deposited: 2020-06-07
Authors: Wang, R., Li, X.
PDB entry 6xbz: Structure of the human CDK-activating kinase
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2020-06-07
Authors: Greber, B.J., Perez-Bertoldi, J.M., Lim, K., Iavarone, A.T., Toso, D.B., Nogales, E.
PDB entry 6xc0: Crystal structure of bacteriophage T4 spackle and lysozyme in monoclinic form
Classification: HYDROLASE
Source organism: Escherichia virus T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2020-06-07
Authors: Shi, K., Oakland, J.T., Kurniawan, F., Moeller, N.H., Aihara, H.
PDB entry 6xc1: Crystal structure of bacteriophage T4 spackle and lysozyme in orthorhombic form
Classification: HYDROLASE
Source organism: Escherichia virus T4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2020-06-07
Authors: Shi, K., Oakland, J.T., Kurniawan, F., Moeller, N.H., Aihara, H.
PDB entry 6xc2: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC12.1
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 3.112 Å
Deposited: 2020-06-08
Authors: Yuan, M., Liu, H., Wu, N.C., Zhu, X., Wilson, I.A.
PDB entry 6xc3: Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CC12.1 and CR3022
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.698 Å
Deposited: 2020-06-08
Authors: Yuan, M., Liu, H., Wu, N.C., Zhu, X., Wilson, I.A.
PDB entry 6xc4: Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC12.3
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.341 Å
Deposited: 2020-06-08
Authors: Yuan, M., Liu, H., Wu, N.C., Zhu, X., Wilson, I.A.
PDB entry 6xc7: Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CC12.3 and CR3022
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.883 Å
Deposited: 2020-06-08
Authors: Yuan, M., Liu, H., Wu, N.C., Zhu, X., Wilson, I.A.
PDB entry 6xc9: Immune receptor complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-06-08
Authors: Tran, T.M., Faridi, P., Lim, J.J., Ting, T.Y., Onwukwe, G., Bhattacharjee, P., Tresoldi, M.C.E., Cameron, J.F., La-Gruta, L.N., Purcell, W.A., Mannering, I.S., Rossjohn, J., Reid, H.H.
PDB entry 6xca: Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment, C105
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-08
Authors: Sharaf, N.G., Barnes, C.O., Bjorkman, P.J.
PDB entry 6xcb: Structure of the C. botulinum neurotoxin serotype A light chain protease in complex with covalent inhibitor 20
Classification: TOXIN/INHIBITOR
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.74 Å
Deposited: 2020-06-08
Authors: Tararina, M.A., Allen, K.N.
PDB entry 6xcc: Structure of the C. botulinum neurotoxin serotype A light chain protease in complex with covalent inhibitor 21
Classification: TOXIN/INHIBITOR
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-08
Authors: Tararina, M.A., Allen, K.N.
PDB entry 6xcd: Structure of the C. botulinum neurotoxin serotype A light chain protease in complex with covalent inhibitor 22
Classification: TOXIN/INHIBITOR
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2020-06-08
Authors: Tararina, M.A., Allen, K.N.
PDB entry 6xce: Structure of the C. botulinum neurotoxin serotype A light chain protease in complex with covalent inhibitor 53
Classification: TOXIN/INHIBITOR
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-06-08
Authors: Tararina, M.A., Allen, K.N.
PDB entry 6xcf: Structure of the C. botulinum neurotoxin serotype A light chain protease in complex with noncovalent inhibitor 59
Classification: TOXIN/INHIBITOR
Source organism: Clostridium botulinum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2020-06-08
Authors: Tararina, M.A., Allen, K.N.
PDB entry 6xcg: Histone-lysine N-methyltransferase NSD2-PWWP1 with compound UNC6934
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2020-06-08
Authors: Zhou, M.Q., Dong, A., Ingerman, L.A., Hanley, R.P., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
PDB entry 6xch: Room-temperature X-ray Crystal structure of SARS-CoV-2 main protease in complex with Leupeptin
Classification: VIRAL PROTEIN, HYDROLASE/INHIBITOR
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-06-08
Authors: Kneller, D.W., Kovalevsky, A., Coates, L.
PDB entry 6xci: Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-3D
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Klebsiella pneumoniae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-06-08
Authors: Worrall, L.J., Sun, T., Mulligan, V.K., Strynadka, N.C.J.
PDB entry 6xcj: Crystal Structure of DH650 Fab from a Rhesus Macaque in Complex with HIV-1 gp120 Core
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-06-08
Authors: Raymond, D.D., Chug, H., Harrison, S.C.
PDB entry 6xck: Crystal structure of C-As lyase with mutation K105E
Classification: OXIDOREDUCTASE
Source organism: Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NBRC 15933 / NCIMB 10081 / Henssen B9)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2020-06-08
Authors: Venkadesh, S., Yoshinaga, M., Kandavelu, P., Sankaran, B., Rosen, B.P.
PDB entry 6xcl: Crystal Structure of human telomeric DNA G-quadruplex in complex with a novel platinum(II) complex.
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2020-06-08
Authors: Miron, C.E., van Staalduinen, L.M., Jia, Z., Petitjean, A.
PDB entry 6xcm: Structure of the SARS-CoV-2 spike glycoprotein in complex with the C105 neutralizing antibody Fab fragment (state 1)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2020-06-08
Authors: Barnes, C.O., Bjorkman, P.J.
PDB entry 6xcn: Structure of the SARS-CoV-2 spike glycoprotein in complex with the C105 neutralizing antibody Fab fragment (state 2)
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.66 Å
Deposited: 2020-06-08
Authors: Barnes, C.O., Bjorkman, P.J.
PDB entry 6xco: Immune receptor complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2020-06-08
Authors: Tran, T.M., Faridi, P., Lim, J.J., Ting, T.Y., Onwukwe, G., Bhattacharjee, P., Jones, M.C., Tresoldi, E., Cameron, J.F., La-Gruta, L.N., Purcell, W.A., Mannering, I.S., Rossjohn, J., Reid, H.H.
PDB entry 6xcp: Immune receptor complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2020-06-08
Authors: Tran, T.M., Faridi, P., Lim, J.J., Ting, T.Y., Onwukwe, G., Bhattacharjee, P., Jones, M.C., Tresoldi, E., Cameron, J.F., La-Gruta, L.N., Purcell, W.A., Mannering, I.S., Rossjohn, J., Reid, H.H.
PDB entry 6xcq: Erythromycin esterase EreC, mutant H289N in its closed conformation
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-06-09
Authors: Zielinski, M., Park, J., Berghuis, A.M.
PDB entry 6xcr: NMR structure of Ost4 in DPC micelles
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae (strain YJM789)
Experimental method: SOLUTION NMR
Deposited: 2020-06-09
Authors: Chaudhary, B.P.
PDB entry 6xcs: Erythromycin esterase mutant EreC H289N in its open conformation
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-06-09
Authors: Zielinski, M., Berghuis, A.M.
PDB entry 6xct: Porcine pepsin in complex with amprenavir
Classification: HYDROLASE/INHIBITOR
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2020-06-09
Authors: Vuksanovic, N., Silvaggi, N.R.
PDB entry 6xcu: NMR structure of Ost4V23D, a critical mutant of Ost4, in DPC micelles
Classification: MEMBRANE PROTEIN
Source organism: Saccharomyces cerevisiae (strain YJM789)
Experimental method: SOLUTION NMR
Deposited: 2020-06-09
Authors: Chaudhary, B.P.
PDB entry 6xcv: Crystal structure of apo SznF from Streptomyces achromogenes var. streptozoticus NRRL 2697
Classification: OXIDOREDUCTASE
Source organism: Streptomyces achromogenes subsp. streptozoticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2020-06-09
Authors: McBride, M.J., Boal, A.K.
PDB entry 6xcx: Nitric Oxide Synthase from Bacillus subtilis in complex with N2-((3-((2-aminoquinolin-7-yl)methoxy)phenoxy)methyl)pyridine-2,6-diamine
Classification: OXIDOREDUCTASE
Source organism: Bacillus subtilis (strain 168)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25203 Å
Deposited: 2020-06-09
Authors: Lewis, M.C., Poulos, T.L.
PDB entry 6xcy: Porcine pepsin in complex with ritonavir
Classification: HYDROLASE/INHIBITOR
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2020-06-09
Authors: Vuksanovic, N., Silvaggi, N.R.
PDB entry 6xcz: Porcine pepsin in complex with saquinavir
Classification: HYDROLASE/INHIBITOR
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2020-06-09
Authors: Vuksanovic, N., Silvaggi, N.R.
PDB entry 6xd0: Dengue serotype 3 RNA-dependent RNA polymerase bound to NITD-434
Classification: TRANSFERASE
Source organism: Dengue virus 3
Experimental method: X-RAY DIFFRACTION
Resolution: 2.012 Å
Deposited: 2020-06-09
Authors: Arora, R., Benson, T.E., Liew, C.W., Lescar, J.
PDB entry 6xd1: Dengue serotype 3 RNA-dependent RNA polymerase bound to NITD-640
Classification: TRANSFERASE
Source organism: Dengue virus 3
Experimental method: X-RAY DIFFRACTION
Resolution: 1.954 Å
Deposited: 2020-06-09
Authors: Arora, R., Benson, T.E., Liew, C.W., Lescar, J.
PDB entry 6xd2: Porcine pepsin in complex with darunavir
Classification: HYDROLASE/INHIBITOR
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-09
Authors: Vuksanovic, N., Silvaggi, N.R.
PDB entry 6xd3: Structure of the human CAK in complex with THZ1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2020-06-09
Authors: Greber, B.J., Perez-Bertoldi, J.M., Lim, K., Iavarone, A.T., Toso, D.B., Nogales, E.
PDB entry 6xd4: CDC-like protein
Classification: TOXIN
Source organism: Elizabethkingia anophelis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-06-09
Authors: Morton, C.J., Parker, M.W., Lawrence, S.L., Johnstone, B.A., Tweten, R.K.
PDB entry 6xd5: Apo KPC-2 N170A mutant at 1.20 A
Classification: HYDROLASE
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-06-10
Authors: Pemberton, O.A., Chen, Y.
PDB entry 6xd7: KPC-2 N170A mutant bound to hydrolyzed ampicillin at 1.65 A
Classification: HYDROLASE/Antibiotic
Source organism: Klebsiella pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2020-06-10
Authors: Pemberton, O.A., Chen, Y.
PDB entry 6xd8: Crystal Structure of Peptidylprolyl Isomerase (PrsA) Fragment from Bacillus anthracis
Classification: ISOMERASE
Source organism: Bacillus anthracis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.52 Å
Deposited: 2020-06-10
Authors: Minasov, G., Shuvalova, L., Kiryukhina, O., Dubrovska, I., Wiersum, G., Satchell, K.J.F., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 6xd9: Carbonmonoxy hemoglobin in complex with the antisickling agent 2-hydroxy-6-((6-(hydroxymethyl)pyridin-2-yl)methoxy)benzaldehyde (VZHE039)
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2020-06-10
Authors: Pagare, P.P., Safo, M.K., Musayev, F.N.
PDB entry 6xdb: Crystal structure of IRE1a in complex with G-6904
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2020-06-10
Authors: Wallweber, H.A., Weiru, W.
PDB entry 6xdc: Cryo-EM structure of SARS-CoV-2 ORF3a
Classification: TRANSPORT PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2020-06-10
Authors: Kern, D.M., Hoel, C.M., Brohawn, S.G.
PDB entry 6xdd: Crystal structure of IRE1 in complex with G-3053
Classification: TRANSFERASE/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2020-06-10
Authors: Ackerly-Wallweber, H., Wang, W.
PDB entry 6xdf: Crystal structure of IRE1a in complex with G-4100
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.54 Å
Deposited: 2020-06-10
Authors: Steinbacher, S., Wang, W.
PDB entry 6xdg: Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å
Deposited: 2020-06-10
Authors: Franklin, M.C., Saotome, K., Romero Hernandez, A., Zhou, Y.
PDB entry 6xdh: Crystal Structure of NendoU (Uridylate-specific endoribonuclease, nsp15) from Betacoronavirus SARS-CoV-2
Classification: Hydrolase/VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2020-06-10
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6xdj: Crystal Structure Analysis of MBP-SIN3
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae; Serratia sp. (strain FS14)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2020-06-10
Authors: Seo, H.-S., Dhe-Paganon, S.
PDB entry 6xdk: Crystal structure of Phosphoserine aminotransferase (SerC) from Stenotrophomonas maltophilia K279a
Classification: TRANSFERASE
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-06-10
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6xdm: STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN ARYL KETONE INHIBITOR
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2020-06-11
Authors: Klein, D.J., Liu, J.
PDB entry 6xdq: Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
Classification: RIBOSOME,TRANSCRIPTION/TRANSLATION
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2020-06-11
Authors: Molodtsov, V., Ebright, R.H., Wang, C., Su, M.
PDB entry 6xdr: Escherichia coli transcription-translation complex B (TTC-B) containing an 27 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Classification: RIBOSOME
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2020-06-11
Authors: Molodtsov, V., Wang, C., Su, M., Ebright, R.H.
PDB entry 6xds: Crystal structure of MBP-TREM2 Ig domain fusion with fragment, 2-((4-bromophenyl)amino)ethan-1-ol
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Methanosarcina mazei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.466 Å
Deposited: 2020-06-11
Authors: Su, H.P.
PDB entry 6xdt: Carbonmonoxy hemoglobin in complex with the antisickling agent methyl 5-((2-formyl-4-methoxyphenoxy)methyl)picolinate
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2020-06-11
Authors: Pagare, P.P., Safo, M.K., Musayev, F.N.
PDB entry 6xdv: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J3 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.003 Å
Deposited: 2020-06-11
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xdw: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J5 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.148 Å
Deposited: 2020-06-11
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xdx: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J6 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.899 Å
Deposited: 2020-06-11
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xdy: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J7 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2020-06-11
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xdz: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J8 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.106 Å
Deposited: 2020-06-11
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xe0: Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)
Classification: RIBOSOME
Source organism: Escherichia coli; Escherichia coli (strain K12); Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.8 Å
Deposited: 2020-06-11
Authors: Washburn, R., Zuber, P., Sun, M., Hashem, Y., Shen, B., Li, W., Harvey, S., Acosta-Reyes, F.J., Knauer, S.H., Frank, J., Gottesman, M.E.
PDB entry 6xe1: Structure of SARS-CoV-2 spike protein receptor binding domain in complex with a potent neutralizing antibody, CV30 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2020-06-11
Authors: Hurlburt, N.K., Pancera, M.
PDB entry 6xe3: Salmonella typhimurium Tryptophan Synthase beta-S377A mutant in complex with inhibitor F9 at the enzyme alpha-site, cesium ion at the metal coordination site and carbanion III E(C3) at the enzyme beta-site.
Classification: LYASE
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2020-06-11
Authors: Hilario, E., Dunn, M.F., Mueller, L.J., Fan, L.
PDB entry 6xe4: BTK Fluorocyclopropyl amide inhibitor, Compound 25
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2020-06-11
Authors: Kiefer, J.R., Crawford, J.J., Lee, W., Eigenbrot, C., Yu, C.
PDB entry 6xe6: Structure of Human Dispatched-1 (DISP1)
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.53 Å
Deposited: 2020-06-12
Authors: Chen, H., Liu, Y., Li, X.
PDB entry 6xe7: Carbonmonoxy hemoglobin in complex with the antisickling agent methyl 2-((2-formyl-3-hydroxyphenoxy)methyl)nicotinate
Classification: OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-06-12
Authors: Pagare, P.P., Safo, M.K., Musayev, F.N.
PDB entry 6xe8: Crystal Structure of the PTP1B YopH WPD loop Chimera 3 apo form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.952 Å
Deposited: 2020-06-12
Authors: Olsen, K.J., Shen, R., Johnson, S.J., Hengge, A.C.
PDB entry 6xe9: 10S myosin II (smooth muscle)
Classification: CONTRACTILE PROTEIN
Source organism: Meleagris gallopavo
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2020-06-12
Authors: Tiwari, P., Craig, R., Padron, R.
PDB entry 6xea: Crystal Structure of the PTP1B YopH WPD loop Chimera 3 bound to vanadate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.549 Å
Deposited: 2020-06-12
Authors: Olsen, K.J., Shen, R., Johnson, S.J., Hengge, A.C.
PDB entry 6xeb: STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH KETONE INHIBITOR (COMPOUND E)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2020-06-12
Authors: Klein, D.J., Clausen, D.
PDB entry 6xec: STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH KETONE INHIBITOR (COMPOUND O)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2020-06-12
Authors: Klein, D.J., Clausen, D.
PDB entry 6xed: Crystal Structure of the PTP1B YopH WPD loop Chimera 3 bound to tungstate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.795 Å
Deposited: 2020-06-12
Authors: Olsen, K.J., Shen, R., Johnson, S.J., Hengge, A.C.
PDB entry 6xee: Crystal Structure of the PTP1B YopH WPD loop Chimera 4 apo form
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2020-06-12
Authors: Olsen, K.J., Shen, R., Johnson, S.J., Hengge, A.C.
PDB entry 6xef: Crystal structure of the PTP1B YopH WPD loop Chimera 4 bound to vanadate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.048 Å
Deposited: 2020-06-12
Authors: Olsen, K.J., Shen, R., Johnson, S.J., Hengge, A.C.
PDB entry 6xeg: Crystal structure of the PTP1B YopH WPD loop Chimera 4 bound to tungstate
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.549 Å
Deposited: 2020-06-12
Authors: Olsen, K.J., Shen, R., Johnson, S.J., Hengge, A.C.
PDB entry 6xeh: Solution NMR Structure of DE NOVO DESIGNED Rossmann 2x3 Fold Protein r2x3_168, Northeast Structural Genomics Consortium (NESG) Target OR386
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: SOLUTION NMR
Deposited: 2020-06-12
Authors: Liu, G., Montelione, G.T., Northeast Structural Genomics Consortium (NESG)
PDB entry 6xei: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J9 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.049 Å
Deposited: 2020-06-12
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xej: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J10 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.807 Å
Deposited: 2020-06-12
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xek: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J14 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2020-06-12
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xel: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J15 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.001 Å
Deposited: 2020-06-12
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xem: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J16 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.055 Å
Deposited: 2020-06-12
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xeo: Structure of Mfd bound to dsDNA
Classification: DNA BINDING PROTEIN, Hydrolase/DNA
Source organism: Escherichia coli (strain K12); SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 5.5 Å
Deposited: 2020-06-12
Authors: Brugger, C., Deaconescu, A.
PDB entry 6xep: Crystal structure of Thiamine-monophosphate kinase from Stenotrophomonas maltophilia K279a
Classification: TRANSFERASE
Source organism: Stenotrophomonas maltophilia (strain K279a)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 6xeq: Crystal structure of the tetrameric 6-phosphogluconate dehydrogenase from Gluconobacter oxidans
Classification: OXIDOREDUCTASE
Source organism: Gluconobacter oxydans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2020-06-13
Authors: Maturana, P., Roversi, P., Castro-Fernandez, V., Herrera-Morande, A., Garratt, R.C., Cabrera, R.
PDB entry 6xer: Tubulin-RB3_SLD in complex with colchicine
Classification: CELL CYCLE/INHIBITOR
Source organism: Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2020-06-13
Authors: White, S.W., Yun, M.
PDB entry 6xes: Tubulin-RB3_SLD in complex with compound 40a
Classification: CELL CYCLE/INHIBITOR
Source organism: Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2020-06-13
Authors: White, S.W., Yun, M.
PDB entry 6xet: Tubulin-RB3_SLD in complex with compound 60c
Classification: CELL CYCLE/INHIBITOR
Source organism: Rattus norvegicus; Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2020-06-13
Authors: White, S.W., Yun, M.
PDB entry 6xeu: CryoEM structure of GIRK2PIP2* - G protein-gated inwardly rectifying potassium channel GIRK2 with PIP2
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2020-06-13
Authors: Mathiharan, Y.K., Glaaser, I.W., Skiniotis, G., Slesinger, P.A.
PDB entry 6xev: CryoEM structure of GIRK2-PIP2/CHS - G protein-gated inwardly rectifying potassium channel GIRK2 with modulators cholesteryl hemisuccinate and PIP2
Classification: TRANSPORT PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-06-14
Authors: Mathiharan, Y.K., Glaaser, I.W., Skiniotis, G., Slesinger, P.A.
PDB entry 6xew: Structure of Serratia marcescens 2,3-butanediol dehydrogenase
Classification: OXIDOREDUCTASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-06-14
Authors: Alahuhta, P.M., Lunin, V.V.
PDB entry 6xex: Structure of Serratia marcescens 2,3-butanediol dehydrogenase mutant Q247A/V139Q
Classification: OXIDOREDUCTASE
Source organism: Serratia marcescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2020-06-14
Authors: Alahuhta, P.M., Lunin, V.V.
PDB entry 6xey: Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-4
Classification: VIRAL PROTEIN/Immune System
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2020-06-14
Authors: Rapp, M., Shapiro, L., Ho, D.D.
PDB entry 6xez: Structure of SARS-CoV-2 replication-transcription complex bound to nsp13 helicase - nsp13(2)-RTC
Classification: TRANSFERASE/HYDROLASE/RNA
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2020-06-14
Authors: Chen, J., Malone, B., Llewellyn, E.C., Campbell, E.A., Darst, S.A.
PDB entry 6xf1: Nesprin-2G(aa1425-1649)-FHOD1(aa1-339) complex, H. sapiens
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2020-06-15
Authors: Lim, S.M., Schwartz, T.U.
PDB entry 6xf2: Nesprin-1G (aa2070-2200)-FHOD1(aa1-339) complex, H. sapiens
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 7.11 Å
Deposited: 2020-06-15
Authors: Lim, S.M., Schwartz, T.U.
PDB entry 6xf3: Crystal structure of STING in complex with E7766
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2020-06-15
Authors: Chen, Y., Wang, J.Y., Kim, D.-S.
PDB entry 6xf4: Crystal structure of STING REF variant in complex with E7766
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2020-06-15
Authors: Chen, Y., Wang, J.Y., Kim, D.-S.
PDB entry 6xf5: Cryo-EM structure of a biotinylated SARS-CoV-2 spike probe in the prefusion state (RBDs down)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2020-06-15
Authors: Cerutti, G., Gorman, J., Kwong, P.D., Shapiro, L.
PDB entry 6xf6: Cryo-EM structure of a biotinylated SARS-CoV-2 spike probe in the prefusion state (1 RBD up)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 4 Å
Deposited: 2020-06-15
Authors: Cerutti, G., Gorman, J., Kwong, P.D., Shapiro, L.
PDB entry 6xf7: SLP
Classification: VIRUS LIKE PARTICLE
Source organism: Mammalian orthoreovirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.6 Å
Deposited: 2020-06-15
Authors: Sutton, G., Sun, D.P., Fu, X.F., Kotecha, A., Hecksel, G.W., Clare, D.K., Zhang, P., Stuart, D., Boyce, M.
PDB entry 6xf8: DLP 5 fold
Classification: VIRUS LIKE PARTICLE
Source organism: Reovirus type 1 (strain Lang)
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å
Deposited: 2020-06-15
Authors: Sutton, G., Sun, D.P., Fu, X.F., Kotecha, A., Hecksel, G.W., Clare, D.K., Zhang, P., Stuart, D., Boyce, M.
PDB entry 6xf9: Crystal structure of KSHV ORF68
Classification: VIRAL PROTEIN
Source organism: Human herpesvirus 8 type M
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2020-06-15
Authors: Didychuk, A.L., Gates, S.N., Martin, A., Glaunsinger, B.
PDB entry 6xfa: Cryo-EM structure of EBV BFLF1
Classification: VIRAL PROTEIN
Source organism: Epstein-Barr virus (strain GD1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2020-06-15
Authors: Didychuk, A.L., Gates, S.N., Martin, A., Glaunsinger, B.
PDB entry 6xfc: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J19 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.756 Å
Deposited: 2020-06-15
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xfd: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J20 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.101 Å
Deposited: 2020-06-15
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xfe: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J21 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2020-06-15
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xff: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J22 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.122 Å
Deposited: 2020-06-15
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xfg: Self-assembly of a 3D DNA crystal lattice (4x5 junction version) containing the J23 immobile Holliday junction
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.053 Å
Deposited: 2020-06-15
Authors: Simmons, C.R., MacCulloch, T., Stephanopoulos, N., Yan, H.
PDB entry 6xfi: Crystal Structures of beta-1,4-N-Acetylglucosaminyltransferase 2 (POMGNT2): Structural Basis for Inherited Muscular Dystrophies
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2020-06-15
Authors: Halmo, S.M., Yeh, J., Wells, L., Moremen, K.W., Lanzilotta, W.N.
PDB entry 6xfj: Crystal structure of the type III secretion pilotin InvH
Classification: PROTEIN TRANSPORT
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2020-06-15
Authors: Majewski, D.D., Okon, M., Heinkel, F., Robb, C.S., Vuckovic, M., McIntosh, L.P., Strynadka, N.C.J.
PDB entry 6xfk: Crystal structure of the type III secretion system pilotin-secretin complex InvH-InvG
Classification: PROTEIN TRANSPORT
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2020-06-15
Authors: Majewski, D.D., Okon, M., Heinkel, F., Robb, C.S., Vuckovic, M., McIntosh, L.P., Strynadka, N.C.J.
PDB entry 6xfl: Structural characterization of the type III secretion system pilotin-secretin complex InvH-InvG by NMR spectroscopy
Classification: PROTEIN TRANSPORT
Source organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Experimental method: SOLUTION NMR
Deposited: 2020-06-15
Authors: Majewski, D.D., Okon, M., Heinkel, F., Robb, C.S., Vuckovic, M., McIntosh, L.P., Strynadka, N.C.J.
PDB entry 6xfm: Molecular structure of the core of amyloid-like fibrils formed by residues 111-214 of FUS
Classification: RNA BINDING PROTEIN, PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.62 Å
Deposited: 2020-06-15
Authors: Tycko, R., Lee, M., Ghosh, U., Thurber, K., Kato, M.
PDB entry 6xfn: Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with UAW243
Classification: HYDROLASE
Source organism: Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2020-06-15
Authors: Sacco, M., Ma, C., Wang, J., Chen, Y.
PDB entry 6xfo: Orthorhombic crystal form of Striga hermonthica Dwarf14 (ShD14)
Classification: HYDROLASE
Source organism: Striga hermonthica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2020-06-15
Authors: Hamiaux, C., Snowden, K.C.