LiteFold/PDB huggingface dataset:
PDB entry 8j4w: Structure of Mycobacterium thermoresistibile NrdI(reduced) determined at 1.1 angstrom resolution
Classification: FLAVOPROTEIN
Source organism: Mycolicibacterium thermoresistibile ATCC 19527
Experimental method: X-RAY DIFFRACTION
Resolution: 1.21 Å
Deposited: 2023-04-21
Authors: Yadav, L.R., Mande, S.C.
PDB entry 8j4x: Structure of Mycobacterium tuberculosis NrdF2:NrdIcomplex (oxidised) determined at 3 angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2023-04-21
Authors: Yadav, L.R., Mande, S.C.
PDB entry 8j4y: Structure of Mycobacterium tuberculosis NrdF2:NrdIcomplex (reduced) determined at 3 angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 3.02 Å
Deposited: 2023-04-21
Authors: Yadav, L.R., Mande, S.C.
PDB entry 8j4z: Human 3-methylcrotonyl-CoA carboxylase in BCCP-CTS state with substrate
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2023-04-21
Authors: Liu, D.S., Su, J.Y.
PDB entry 8j50: Crystal structure of Flavihumibacter petaseus GH31 alpha-galactosidase
Classification: HYDROLASE
Source organism: Flavihumibacter petaseus NBRC 106054
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-04-21
Authors: Ikegaya, M., Miyazaki, T.
PDB entry 8j51: Crystal structure of Flavihumibacter petaseus GH31 alpha-galactosidase in complex with galactose
Classification: HYDROLASE
Source organism: Flavihumibacter petaseus NBRC 106054
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2023-04-21
Authors: Ikegaya, M., Miyazaki, T.
PDB entry 8j52: Crystal structure of Flavihumibacter petaseus GH31 alpha-galactosidase mutant D304A in complex with alpha-1,4-galactobiose
Classification: HYDROLASE
Source organism: Flavihumibacter petaseus NBRC 106054
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-04-21
Authors: Ikegaya, M., Miyazaki, T.
PDB entry 8j53: Crystal structure of Bacteroides salyersiae GH31 alpha-galactosidase
Classification: HYDROLASE
Source organism: Bacteroides salyersiae JCM 12988
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-04-21
Authors: Ikegaya, M., Miyazaki, T.
PDB entry 8j54: Crystal structure of RXR/DR2 complex
Classification: DNA/DNA BINDING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.72 Å
Deposited: 2023-04-21
Authors: Chen, Y., Jiang, L.
PDB entry 8j56: Crystal structure of the FlhDC complex from Cupriavidus necator
Classification: TRANSCRIPTION
Source organism: Cupriavidus necator
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2023-04-21
Authors: Cho, S.Y., Oh, H.B., Yoon, S.I.
PDB entry 8j57: Cryo-EM structure of Mycobacterium tuberculosis ATP synthase Fo in complex with bedaquiline(BDQ)
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2023-04-21
Authors: Zhang, Y., Lai, Y., Liu, F., Rao, Z., Gong, H.
PDB entry 8j58: Cryo-EM structure of Mycobacterium tuberculosis ATP synthase Fo in the apo-form
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2023-04-21
Authors: Zhang, Y., Lai, Y., Liu, F., Rao, Z., Gong, H.
PDB entry 8j59: The structure of a novel thermophilic-like old yellow enzyme from Aspergillus flavus-AfOYE1
Classification: BIOSYNTHETIC PROTEIN
Source organism: Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2023-04-21
Authors: Li, N., Wang, Y.
PDB entry 8j5a: Single-particle cryo-EM structure of mouse apoferritin at 1.19 Angstrom resolution (Dataset A)
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 1.19 Å
Deposited: 2023-04-21
Authors: Kawakami, K., Maki-Yonekura, S., Hamaguchi, T., Takaba, K., Yonekura, K.
PDB entry 8j5b: Crystal structure of P domain from norovirus GI.4 capsid protein.
Classification: VIRAL PROTEIN
Source organism: Norovirus Hu/GI.4/S50/2008/Lilla Edet/Sweden
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2023-04-21
Authors: Katsura, K., Sakai, N., Hasegawa, K., Kimura-Someya, T., Shirouzu, M.
PDB entry 8j5d: Cryo-EM structure of starch degradation complex of BAM1-LSF1-MDH
Classification: HYDROLASE
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-04-21
Authors: Guan, Z.Y., Liu, J., Yan, J.J.
PDB entry 8j5e: Crystal structure of kinase AbmG in complex with 4'-thiocytidine
Classification: TRANSFERASE
Source organism: Streptomyces sp. ATCC 700974
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-04-22
Authors: Ushimaru, R., Mori, T., Liu, H.-w., Abe, I.
PDB entry 8j5f: Crystal structure of kinase AbmG in complex with cytidine and ADP
Classification: TRANSFERASE
Source organism: Streptomyces sp. ATCC 700974
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2023-04-22
Authors: Ushimaru, R., Mori, T., Liu, H.-w., Abe, I.
PDB entry 8j5g: Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine 5'-diphosphate
Classification: TRANSFERASE
Source organism: Streptomyces sp. ATCC 700974
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2023-04-22
Authors: Ushimaru, R., Mori, T., Liu, H.-w., Abe, I.
PDB entry 8j5h: Crystal structure of kinase AbmG in complex with 4'-hydroxy-4'-thiocytidine
Classification: TRANSFERASE
Source organism: Streptomyces sp. ATCC 700974
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2023-04-22
Authors: Ushimaru, R., Mori, T., Liu, H.-w., Abe, I.
PDB entry 8j5i: MALT1 death domain
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-04-22
Authors: Lo, Y.C., Kuo, B.J.
PDB entry 8j5j: The crystal structure of bat coronavirus RsYN04 RBD bound to the antibody S43
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Betacoronavirus sp.; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2023-04-23
Authors: Zhao, R.C., Niu, S., Han, P., Qi, J.X., Gao, G.F., Wang, Q.H.
PDB entry 8j5k: Structural insights into photosystem II supercomplex and trimeric FCP antennae of a centric diatom Cyclotella meneghiniana
Classification: PHOTOSYNTHESIS
Source organism: Stephanocyclus meneghinianus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2023-04-23
Authors: Shen, L.L., Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8j5l: Structure of GH1 Br2 beta-glucosidase E163Q mutant from bovine rumen metagenome
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.095 Å
Deposited: 2023-04-23
Authors: Kaenying, W., Kongsaeree, P.T., Tagami, T.
PDB entry 8j5m: Structure of GH1 Br2 beta-glucosidase E350G mutant from bovine rumen metagenome
Classification: HYDROLASE
Source organism: uncultured bacterium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.621 Å
Deposited: 2023-04-23
Authors: Kaenying, W., Kongsaeree, P.T., Tagami, T.
PDB entry 8j5n: Crystal structure of a PETase variant V20 from Ideonella sakaiensis
Classification: HYDROLASE
Source organism: Ideonella sakaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-04-23
Authors: Wei, H.L., Gao, S.F., Li, Q., Liu, W.D., Zhu, L.L.
PDB entry 8j5o: Cryo-EM structure of native RC-LH complex from Roseiflexus castenholzii at 100lux
Classification: PHOTOSYNTHESIS
Source organism: Roseiflexus castenholzii DSM 13941
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-04-24
Authors: Xu, X., Xin, J.
PDB entry 8j5p: Cryo-EM structure of native RC-LH complex from Roseiflexus castenholzii at 2,000lux
Classification: PHOTOSYNTHESIS
Source organism: Roseiflexus castenholzii DSM 13941
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-04-24
Authors: Xu, X., Xin, J.
PDB entry 8j5q: Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-translocation state
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv); Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-04-24
Authors: Yang, X., Hu, T., Zhang, B., Rao, Z.
PDB entry 8j5r: Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the resting state
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2023-04-24
Authors: Yang, X., Hu, T., Zhang, B., Rao, Z.
PDB entry 8j5s: Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-catalytic intermediate state
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv); Mycolicibacterium smegmatis MC2 155
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-04-24
Authors: Yang, X., Hu, T., Zhang, B., Rao, Z.
PDB entry 8j5t: Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the catalytic intermediate state
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-04-24
Authors: Yang, X., Hu, T., Zhang, B., Rao, Z.
PDB entry 8j5u: Crystal structure of Mycobacterium tuberculosis OppA complexed with an endogenous oligopeptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv); Mycolicibacterium smegmatis MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2023-04-24
Authors: Yang, X., Hu, T., Zhang, B., Rao, Z.
PDB entry 8j5v: Crystal structure of estZF172 as a novel biocatalyst for the efficient biosynthesis of a chiral intermediate of pregabalin
Classification: LYASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-04-24
Authors: Chi, C.B., Liang, Z.D., Huo, B.Q., Hu, C.X., Sun, Q.Y.
PDB entry 8j5w: The crystal structure of TrkA(F589L) kinase in complex with N-(3-cyclopropyl-5-((4-methylpiperazin-1-yl)methyl)phenyl)-4^6-methyl-14-oxo-5-oxa-13-aza-1(3,6)-imidazo[1,2-b]pyridazina-4(1,3)-benzenacyclotetradecaphan-2-yne-4^5-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28041 Å
Deposited: 2023-04-24
Authors: Zhang, Z.M., Wang, Y.J.
PDB entry 8j5x: The crystal structure of TrkA(G595R) kinase in complex with N-(3-cyclopropyl-5-((4-methylpiperazin-1-yl)methyl)phenyl)-4^6-methyl-14-oxo-5-oxa-13-aza-1(3,6)-imidazo[1,2-b]pyridazina-4(1,3)-benzenacyclotetradecaphan-2-yne-4^5-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09192 Å
Deposited: 2023-04-24
Authors: Zhang, Z.M., Wang, Y.J.
PDB entry 8j5y: Structural and mechanistic insight into ribosomal ITS2 RNA processing by nuclease-kinase machinery
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2023-04-24
Authors: Chen, J., Chen, H., Li, S., Lin, X., Hu, R., Zhang, K., Liu, L.
PDB entry 8j5z: The cryo-EM structure of the TwOSC1 tetramer
Classification: PLANT PROTEIN
Source organism: Tripterygium wilfordii
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.75 Å
Deposited: 2023-04-24
Authors: Ma, X., Yuru, T., Yunfeng, L., Jiang, T.
PDB entry 8j60: Structural and mechanistic insight into ribosomal ITS2 RNA processing by nuclease-kinase machinery
Classification: RNA BINDING PROTEIN
Source organism: Cyberlindnera jadinii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2023-04-24
Authors: Chen, J., Chen, H., Li, S., Lin, X., Hu, R., Zhang, K., Liu, L.
PDB entry 8j61: The crystal structure of TrkA kinase in complex with 4^6-methyl-N-(3-(4-methyl-1H-imidazol-1-yl)-5-(trifluoromethyl)phenyl)-14-oxo-5-oxa-13-aza-1(3,6)-imidazo[1,2-b]pyridazina-4(1,3)-benzenacyclotetradecaphan-2-yne-4^5-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05065 Å
Deposited: 2023-04-24
Authors: Zhang, Z.M., Wang, Y.J.
PDB entry 8j62: Cryo-EM structure of APOBEC3G-Vif complex
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2023-04-24
Authors: Kouno, T., Shibata, S., Hyun, J., Kim, T.G., Wolf, M.
PDB entry 8j63: The crystal structure of TrkA kinase in complex with 4^6-methyl-N-(3-(4-methyl-1H-imidazol-1-yl)-5-(trifluoromethyl)phenyl)-11-oxo-5-oxa-10,14-diaza-1(3,6)-imidazo[1,2-b]pyridazina-4(1,3)-benzenacyclotetradecaphan-2-yne-4^5-carboxamide
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.0005 Å
Deposited: 2023-04-24
Authors: Zhang, Z.M., Wang, Y.J.
PDB entry 8j64: Crystal structure of Toxoplasma gondii MIC2-M2AP complex
Classification: CELL INVASION
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-04-24
Authors: Zhang, S., Wang, F.F., Zhang, D.J., Song, G.J., Springer, T.A.
PDB entry 8j65: the structure of L,D-transpeptidase LdtMt2 complex with citrate
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2023-04-24
Authors: Li, D.F., Qin, Y.L.
PDB entry 8j66: Crystal structure of glycosyltransferase SgUGT94-289-3 in complex with M3, state 2
Classification: TRANSFERASE
Source organism: Siraitia grosvenorii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2023-04-24
Authors: Li, M., Zhang, S., Cui, S.
PDB entry 8j67: Crystal structure of Toxoplasma gondii M2AP
Classification: CELL INVASION
Source organism: Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-04-24
Authors: Wang, F.F., Zhang, D.J., Zhang, S., Springer, T.A., Song, G.J.
PDB entry 8j68: Crystal structure of the LOV1 R60K mutant of Klebsormidium nitens phototropin
Classification: FLAVOPROTEIN
Source organism: Klebsormidium nitens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.845 Å
Deposited: 2023-04-25
Authors: Gautam, A.K., Sharma, S., Gourinath, S., Kateriya, S.
PDB entry 8j69: Crystal structure of HORMA domain-containing protein 1 (HORMAD1) from Homo sapiens
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2023-04-25
Authors: Yang, X.Y., Liu, X.H.
PDB entry 8j6d: Structure of EP141-C3aR-Go complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-04-25
Authors: Yadav, M.K., Yadav, R., Maharana, J., Sarma, P., Banerjee, R., Shukla, A.K., Gati, C.
PDB entry 8j6e: Structure insights into the NADPH quinone oxidoreductase from Leishmania donovani
Classification: OXIDOREDUCTASE
Source organism: Leishmania donovani
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2023-04-25
Authors: Vishwakarma, C., Ansari, A., Pratap, J.V.
PDB entry 8j6f: Cryo-EM structure of the Tocilizumab Fab/IL-6R complex
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-04-25
Authors: She, J., Chen, L.
PDB entry 8j6g: Neutron structure of copper amine oxidase from Arthrobacter globiformis anaerobically reduced by phenylethylamine at pD 9.0
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2023-04-25
Authors: Murakawa, T., Okajima, T.
PDB entry 8j6h: Structure and allosteric regulation of the inosine 5'-monophosphate-specific phosphatase ISN1 from Saccharomyces cerevisiae
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.44074 Å
Deposited: 2023-04-25
Authors: Byun, S.J., Rhee, S.
PDB entry 8j6i: Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound MK-6892
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-04-26
Authors: Yuan, Q., Zhu, S., Duan, J., Xu, H.E., Duan, X.
PDB entry 8j6j: Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound with GSK256073
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2023-04-26
Authors: Yuan, Q., Zhu, S., Duan, J., Xu, H.E., Duan, X.
PDB entry 8j6k: Crystal structure of pro-interleukin-18 and caspase-4 complex
Classification: HYDROLASE/IMMUNE SYSTEM
Source organism: Homo sapiens; Shigella flexneri
Experimental method: X-RAY DIFFRACTION
Resolution: 3.12 Å
Deposited: 2023-04-26
Authors: Sun, Q., Hou, Y.J., Ding, J.
PDB entry 8j6l: Cryo-EM structure of thehydroxycarboxylic acid receptor 2-Gi protein complex bound niacin
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2023-04-26
Authors: Yuan, Q., Zhu, S., Duan, J., Xu, H.E., Duan, X.
PDB entry 8j6m: SIDT1 protein
Classification: TRANSCRIPTION
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2023-04-26
Authors: Zhang, J.T., Jiang, D.H.
PDB entry 8j6n: Crystal structure of Cystathionine gamma-lyase in complex with compound 1
Classification: LYASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-04-26
Authors: Hibi, R., Toma-Fukai, S., Shimizu, T., Hanaoka, K.
PDB entry 8j6o: transport T2
Classification: TRANSPORT PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2023-04-26
Authors: Jiang, D.H., Zhang, J.T.
PDB entry 8j6p: Cryo-EM structure of the MK-6892-bound human HCAR2-Gi1 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.55 Å
Deposited: 2023-04-26
Authors: Mao, C., Gao, M., Zang, S., Zhu, Y., Ma, X., Zhang, Y.
PDB entry 8j6q: Cryo-EM structure of the 3-HB and compound 9n-bound human HCAR2-Gi1 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-04-26
Authors: Mao, C., Gao, M., Zang, S., Zhu, Y., Ma, X., Zhang, Y.
PDB entry 8j6r: Cryo-EM structure of the MK-6892-bound human HCAR2-Gi1 complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2023-04-26
Authors: Mao, C., Gao, M., Zang, S., Zhu, Y., Ma, X., Zhang, Y.
PDB entry 8j6s: Cryo-EM structure of the single CAF-1 bound right-handed Di-tetrasome
Classification: REPLICATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2023-04-26
Authors: Liu, C.P., Yu, Z.Y., Xu, R.M.
PDB entry 8j6t: Cryo-EM structure of the double CAF-1 bound right-handed Di-tetrasome
Classification: REPLICATION/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.6 Å
Deposited: 2023-04-26
Authors: Liu, C.P., Yu, Z.Y., Xu, R.M.
PDB entry 8j6v: Structure of yeast Arginyl-tRNA-protein transferase 1
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2023-04-26
Authors: Yashiro, Y., Tomita, K.
PDB entry 8j6w: Full length crystal structure of Escherichia coli Fur
Classification: DNA BINDING PROTEIN
Source organism: Escherichia coli (strain K12)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2023-04-26
Authors: Zhang, F., Wang, X., Gu, L.
PDB entry 8j6x: Crystal structure of SARS-CoV2 N-NTD complexed with 5-Benzyloxygramine derivative (P3-8)
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-04-26
Authors: Hong, J.Y., Hou, M.H.
PDB entry 8j6y: Crystal structure of class A beta-lactamase PSE-4 WT- Apo state
Classification: HYDROLASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-04-26
Authors: Sarkar, M., Bhattacharya, S., Hazra, S.
PDB entry 8j6z: Cryo-EM structure of the Arabidopsis thaliana photosystem I(PSI-LHCII-ST2)
Classification: PHOTOSYNTHESIS
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-04-26
Authors: Chen, S.J.B., Wu, J.H., Sui, S.F., Zhang, L.X.
PDB entry 8j70: Native SAND domain of protein SP140 with DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-04-26
Authors: Li, H.T., Liu, W.Q.
PDB entry 8j71: Selenomethionine mutant (L601Sem/L654Sem) of SAND domain of protein SP140 with DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2023-04-26
Authors: Li, H.T., Liu, W.Q.
PDB entry 8j72: Crystal structure of mammalian Trim71 in complex with lncRNA Trincr1
Classification: RNA BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.16 Å
Deposited: 2023-04-27
Authors: Shi, F.D., Zhang, K., Che, S.Y., Zhi, S.X., Yang, N.
PDB entry 8j73: Methylcrotonoyl-CoA carboxylase core-Dimer
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.16 Å
Deposited: 2023-04-27
Authors: Liu, D.S., Su, J.Y.
PDB entry 8j74: Human high-affinity choline transporter CHT1 in the HC-3-bound outward-facing open conformation, dimeric state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-04-27
Authors: Gao, Y., Qiu, Y., Zhao, Y.
PDB entry 8j75: Human high-affinity choline transporter CHT1 in the HC-3-bound outward-facing open conformation, monomeric state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2023-04-27
Authors: Gao, Y., Qiu, Y., Zhao, Y.
PDB entry 8j76: Human high-affinity choline transporter CHT1 in the inward-facing apo-open conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-04-27
Authors: Gao, Y., Qiu, Y., Zhao, Y.
PDB entry 8j77: Human high-affinity choline transporter CHT1 in the choline-bound inward-facing occluded conformation
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-04-27
Authors: Gao, Y., Qiu, Y., Zhao, Y.
PDB entry 8j78: Human 3-methylcrotonyl-CoA carboxylase in BCCP-H2 state
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2023-04-27
Authors: Liu, D.S., Su, J.Y.
PDB entry 8j79: Bovine Xanthine Oxidoreductase Crystallized with oxypurinol
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2023-04-27
Authors: Okamoto, K., Sekine, M.
PDB entry 8j7a: Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 1 (PSI-ST1)
Classification: PHOTOSYNTHESIS
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2023-04-27
Authors: Chen, S.J.B., Wu, J.H., Sui, S.F., Zhang, L.X.
PDB entry 8j7b: Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 2 (PSI-ST2)
Classification: PHOTOSYNTHESIS
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-04-27
Authors: Chen, S.J.B., Wu, J.H., Sui, S.F., Zhang, L.X.
PDB entry 8j7c: Crystal structure of triosephosphate isomerase from Leishmania orientalis at 1.88A with an arsenic ion bound at Cys57
Classification: ISOMERASE
Source organism: Leishmania orientalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.88 Å
Deposited: 2023-04-27
Authors: Kuaprasert, B., Attarataya, J., Riangrungroj, P., Pornthanakasem, W., Suginta, W., Mungthin, M., Leelayoova, S., Choowongkomon, K., Leartsakulpanich, U.
PDB entry 8j7d: Human 3-methylcrotonyl-CoA carboxylase in BCCP-H1 state
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-04-27
Authors: Liu, D.S., Su, J.Y.
PDB entry 8j7e: Crystal structure of BRIL in complex with 1b3 Fab
Classification: IMMUNE SYSTEM
Source organism: Escherichia coli; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2023-04-27
Authors: Zhong, Y.X., Guo, Q., Tao, Y.Y.
PDB entry 8j7f: ion channel
Classification: TRANSPORT PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2023-04-27
Authors: Chen, H.W., Jiang, D.
PDB entry 8j7g: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2023-04-27
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8j7h: ion channel
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-04-27
Authors: Chen, H.W., Jiang, D.
PDB entry 8j7i: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-04-27
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8j7j: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2023-04-27
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8j7k: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2023-04-27
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8j7l: crystal structure of SulE mutant
Classification: HYDROLASE
Source organism: Hansschlegelia zhihuaiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2023-04-27
Authors: Liu, B., He, J., Ran, T., Wang, W.
PDB entry 8j7m: ion channel
Classification: TRANSPORT PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2023-04-27
Authors: Chen, H.W., Jiang, D.
PDB entry 8j7n: The cryo-EM structure of Fe3+ induced alpha-syn fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2023-04-27
Authors: Zhao, Q.Y., Tao, Y.Q., Yan, F., Liu, C., Li, D.
PDB entry 8j7o: Human pyruvate carboxylase in BCCP-CTS state without BC
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.83 Å
Deposited: 2023-04-27
Authors: Liu, D.S., Su, J.Y.
PDB entry 8j7p: The cryo-EM structure of PiB bound TMEM106B fibril.
Classification: PROTEIN FIBRIL
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-04-27
Authors: Zhao, Q.Y., Tao, Y.Q., Yan, F., Liu, C., Li, D.
PDB entry 8j7q: The active site mutant of human inorganic pyrophosphatase
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-04-28
Authors: Hu, F., Zheng, S.
PDB entry 8j7r: Cryo-EM structure of the J-K-St region of EMCV IRES in complex with eIF4G-HEAT1 and eIF4A (J-K-St/eIF4G focused)
Classification: TRANSLATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2023-04-28
Authors: Suzuki, H., Fujiyoshi, Y., Imai, S., Shimada, I.
PDB entry 8j7s: Structure of the SPARTA complex
Classification: IMMUNE SYSTEM/RNA/DNA
Source organism: Maribacter polysiphoniae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Deposited: 2023-04-28
Authors: Guo, M., Zhu, Y., Lin, Z., Huang, Z.
PDB entry 8j7t: Cryo-EM structure of hZnT7-Fab complex in zinc-unbound state, determined in outward-facing conformation
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.2 Å
Deposited: 2023-04-28
Authors: Han, B.B., Inaba, K., Watanabe, S.
PDB entry 8j7u: Cryo-EM structure of hZnT7-Fab complex in zinc-bound state, determined in outward-facing conformation
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.12 Å
Deposited: 2023-04-28
Authors: Han, B.B., Inaba, K., Watanabe, S.
PDB entry 8j7v: Cryo-EM structure of hZnT7-Fab complex in zinc-unbound state, determined in heterogeneous conformations- one subunit in an inward-facing and the other in an outward-facing conformation
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-04-28
Authors: Han, B.B., Inaba, K., Watanabe, S.
PDB entry 8j7w: Cryo-EM structure of hZnT7-Fab complex in zinc state 2, determined in heterogeneous conformations- one subunit in an inward-facing zinc-bound and the other in an outward-facing zinc-bound conformation
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2023-04-28
Authors: Han, B.B., Inaba, K., Watanabe, S.
PDB entry 8j7x: Cryo-EM structure of hZnT7DeltaHis-loop-Fab complex in zinc-unbound state, determined in outward-facing conformation
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-04-28
Authors: Han, B.B., Inaba, K., Watanabe, S.
PDB entry 8j7y: Cryo-EM structure of hZnT7DeltaHis-loop-Fab complex in zinc-bound state, determined in outward-facing conformation
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-04-28
Authors: Han, B.B., Inaba, K., Watanabe, S.
PDB entry 8j7z: Structure of FCP trimer in Cyclotella meneghiniana
Classification: PHOTOSYNTHESIS
Source organism: Stephanocyclus meneghinianus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2023-04-28
Authors: Shen, L.L., Li, Z.H., Shen, J.R., Wang, W.D.
PDB entry 8j80: Cryo-EM structure of hZnT7-Fab complex in zinc state 1, determined in heterogeneous conformations- one subunit in an inward-facing zinc-bound and the other in an outward-facing zinc-unbound conformation
Classification: METAL TRANSPORT
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2023-04-28
Authors: Han, B.B., Inaba, K., Watanabe, S.
PDB entry 8j81: MDM2 bound with a peptoid
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2023-04-28
Authors: Yokomine, M., Fukuda, Y., Ago, H., Matsuura, H., Ueno, G., Nagatoishi, S., Yamamoto, M., Tsumoto, K., Jumpei, M., Sando, S.
PDB entry 8j82: GaHNL-12gen (artificial S-hydroxynitrile lyase generated by GAOptimizer)
Classification: LYASE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2023-04-29
Authors: Ozawa, H., Unno, I., Sekine, R., Ito, S., Nakano, S.
PDB entry 8j83: Crystal structure of formate dehydrogenase from Methylorubrum extorquens AM1
Classification: OXIDOREDUCTASE
Source organism: Methylorubrum extorquens AM1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2023-04-29
Authors: Kobayashi, A., Taketa, M., Sowa, K., Kano, K., Higuchi, Y., Ogata, H.
PDB entry 8j84: Short ago complexed with TIR-APAZ
Classification: DNA BINDING PROTEIN
Source organism: Thermoflavifilum thermophilum
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2023-04-30
Authors: Guo, L.J., Huang, P.P., Li, Z.X., Xiao, Y.B., Chen, M.R.
PDB entry 8j85: Cryo-EM structure of ochratoxin A-detoxifying amidohydrolase ADH3 mutant S88E in complex with ochratoxin A
Classification: HYDROLASE
Source organism: Stenotrophomonas acidaminiphila
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2023-04-30
Authors: Dai, L.H., Niu, D., Huang, J.-W., Li, X., Shen, P.P., Li, H., Hu, Y.M., Yang, Y., Chen, C.-C., Guo, R.-T.
PDB entry 8j86: Monkeypox virus DNA replication holoenzyme F8, A22 and E4 complex in a DNA binding form
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-04-30
Authors: Xu, Y., Wu, Y., Wu, X., Zhang, Y., Yang, Y., Li, D., Yang, B., Gao, K., Zhang, Z., Dong, C.
PDB entry 8j87: Asfv topoisomerase 2 - apo conformer Ia
Classification: ISOMERASE
Source organism: African swine fever virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.42 Å
Deposited: 2023-05-01
Authors: Chang, C.-W., Tsai, M.-D.
PDB entry 8j88: Asfv topoisomerase 2 - apo conformer Ib
Classification: ISOMERASE
Source organism: African swine fever virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2023-05-01
Authors: Chang, C.-W., Tsai, M.-D.
PDB entry 8j89: Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIa
Classification: ISOMERASE
Source organism: African swine fever virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.31 Å
Deposited: 2023-05-01
Authors: Chang, C.-W., Tsai, M.-D.
PDB entry 8j8a: Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIb
Classification: ISOMERASE
Source organism: African swine fever virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2023-05-01
Authors: Chang, C.-W., Tsai, M.-D.
PDB entry 8j8b: Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIa
Classification: ISOMERASE
Source organism: African swine fever virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.43 Å
Deposited: 2023-05-01
Authors: Chang, C.-W., Tsai, M.-D.
PDB entry 8j8c: Cryo-EM structure of Asfv topoisomerase 2 - apo conformer IIIb
Classification: ISOMERASE
Source organism: African swine fever virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2023-05-01
Authors: Chang, C.-W., Tsai, M.-D.
PDB entry 8j8d: Crystal structure of SRCR domain 11 of DMBT1
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2023-05-01
Authors: Zhang, C., Lu, P., Nagata, K.
PDB entry 8j8e: Human serum albumin-palladium(II) agent complex
Classification: HORMONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-01
Authors: Zhang, Z.L., Zhang, J.Z.
PDB entry 8j8f: Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and dCTP
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.98 Å
Deposited: 2023-05-01
Authors: Xu, Y., Wu, Y., Wu, X., Zhang, Y., Yang, Y., Li, D., Yang, B., Gao, K., Zhang, Z., Dong, C.
PDB entry 8j8g: Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and cidofovir diphosphate
Classification: VIRAL PROTEIN
Source organism: Monkeypox virus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.79 Å
Deposited: 2023-05-01
Authors: Xu, Y., Wu, Y., Wu, X., Zhang, Y., Yang, Y., Li, D., Yang, B., Gao, K., Zhang, Z., Dong, C.
PDB entry 8j8h: SPARTA monomer bound with guide-target, state 2
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Thermoflavifilum thermophilum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-01
Authors: Li, Z.X., Guo, L.J., Huang, P.P., Xiao, Y.B., Chen, M.R.
PDB entry 8j8i: Membrane-bound structure of CD3z cytoplasmic domain
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-05-01
Authors: Li, H., Xu, C.
PDB entry 8j8j: Membrane bound PRTase, C3 symmetry, donor bound
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2023-05-01
Authors: Wu, F.Y., Gao, S., Zhang, L., Rao, Z.H.
PDB entry 8j8k: Membrane bound PRTase, C3 symmetry, acceptor bound
Classification: MEMBRANE PROTEIN
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.36 Å
Deposited: 2023-05-01
Authors: Wu, F.Y., Gao, S., Zhang, L., Rao, Z.H.
PDB entry 8j8l: Overall structure of the LAT1-4F2hc bound with L-dopa
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2023-05-02
Authors: Yan, R.H., Li, Y.N., Shi, T.H.
PDB entry 8j8m: Overall structure of the LAT1-4F2hc bound with tryptophan
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.58 Å
Deposited: 2023-05-02
Authors: Yan, R.H., Li, Y.N., Shi, T.H.
PDB entry 8j8n: Structure of p53 DNA-binding domain and ZNF568 KRAB domain complex
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.02 Å
Deposited: 2023-05-02
Authors: Han, C.W.
PDB entry 8j8o: Structure of Acb2 complexed with 2',3'-cGAMP
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PaP2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2023-05-02
Authors: Cao, X.L., Xiao, Y., Feng, Y.
PDB entry 8j8p: Structure of the four-component Paf1 complex from Saccharomyces eubayanus
Classification: TRANSCRIPTION
Source organism: Saccharomyces eubayanus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2023-05-02
Authors: Wang, Z., Qin, Y., Zhou, Y., Cao, Y.
PDB entry 8j8q: Structure of the four-component Paf1 complex from Saccharomyces eubayanus
Classification: TRANSCRIPTION
Source organism: Saccharomyces eubayanus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.11 Å
Deposited: 2023-05-02
Authors: Wang, Z., Qin, Y., Zhou, Y., Cao, Y.
PDB entry 8j8r: Structure of beta-arrestin2 in complex with M2Rpp
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-02
Authors: Maharana, J., Sano, F.K., Shihoya, W., Banerjee, R., Nureki, O., Shukla, A.K.
PDB entry 8j8t: Crystal structure of calcium-saturated SRCR domain 11 of DMBT1
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2023-05-02
Authors: Zhang, C., Lu, P., Nagata, K.
PDB entry 8j8v: Structure of beta-arrestin2 in complex with D6Rpp (Local Refine)
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.22 Å
Deposited: 2023-05-02
Authors: Maharana, J., Sarma, P., Yadav, M.K., Chami, M., Banerjee, R., Shukla, A.K.
PDB entry 8j8w: Crystal structure of AtHPPD-Y19788 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.601 Å
Deposited: 2023-05-02
Authors: Lin, H.-Y., Dong, J., Yang, G.-F.
PDB entry 8j8x: Crystal structure of AtHPPD-YH20307 complex
Classification: OXIDOREDUCTASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.598 Å
Deposited: 2023-05-02
Authors: Lin, H.-Y., Dong, J., Yang, G.-F.
PDB entry 8j8y: Phytoplasma immunodominant membrane protein
Classification: PROTEIN BINDING
Source organism: Peanut witches'-broom phytoplasma
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2023-05-02
Authors: Wang, H.C., Ko, T.P.
PDB entry 8j8z: Structure of beta-arrestin1 in complex with D6Rpp
Classification: SYGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-02
Authors: Maharana, J., Sarma, P., Yadav, M.K., Chami, M., Banerjee, R., Shukla, A.K.
PDB entry 8j90: Cryo-EM structure of DDM1-nucleosome complex
Classification: NUCLEAR PROTEIN
Source organism: Arabidopsis thaliana; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.71 Å
Deposited: 2023-05-02
Authors: Osakabe, A., Takizawa, Y., Horikoshi, N., Hatazawa, S., Berger, F., Kurumizaka, H., Kakutani, T.
PDB entry 8j91: Cryo-EM structure of nucleosome containing Arabidopsis thaliana histones
Classification: NUCLEAR PROTEIN
Source organism: Arabidopsis thaliana; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-02
Authors: Osakabe, A., Takizawa, Y., Horikoshi, N., Hatazawa, S., Berger, F., Kurumizaka, H., Kakutani, T.
PDB entry 8j92: Cryo-EM structure of nucleosome containing Arabidopsis thaliana H2A.W
Classification: NUCLEAR PROTEIN
Source organism: Arabidopsis thaliana; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2023-05-02
Authors: Osakabe, A., Takizawa, Y., Horikoshi, N., Hatazawa, S., Berger, F., Kurumizaka, H., Kakutani, T.
PDB entry 8j97: Structure of Muscarinic receptor (M2R) in complex with beta-arrestin1 (Local refine, cross-linked)
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Bos taurus; Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2023-05-02
Authors: Maharana, J., Sano, F.K., Shihoya, W., Banerjee, R., Nureki, O., Shukla, A.K.
PDB entry 8j98: A near-infrared fluorescent protein of de novo backbone design
Classification: DE NOVO PROTEIN
Source organism: synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-05-02
Authors: Hu, X., Xu, Y.
PDB entry 8j99: Human 3-methylcrotonyl-CoA carboxylase in BCS-mcoa state
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-05-02
Authors: Liu, D.S., Su, J.Y.
PDB entry 8j9a: Solution structure of ABD3 (residues 453-561) of human MED15 isoform 2
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2023-05-03
Authors: Zhang, H., Li, Y.
PDB entry 8j9b: LnaB-actin binary complex
Classification: TRANSFERASE
Source organism: Legionella pneumophila; Oryctolagus cuniculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.42 Å
Deposited: 2023-05-03
Authors: Chen, T.T., Ouyang, S.Y.
PDB entry 8j9c: Crystal structure of M61 peptidase (apo-form) from Xanthomonas campestris
Classification: HYDROLASE
Source organism: Xanthomonas campestris pv. campestris B100
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2023-05-03
Authors: Yadav, P., Kumar, A., Jamdar, S.N., Makde, R.D.
PDB entry 8j9d: Crystal structure of M61 peptidase (bestatin-bound) from Xanthomonas campestris
Classification: HYDROLASE
Source organism: Xanthomonas campestris pv. campestris B100
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2023-05-03
Authors: Yadav, P., Kumar, A., Kulkarni, B.S., Jamdar, S.N., Makde, R.D.
PDB entry 8j9f: Structure of STG-hydrolyzing beta-glucosidase 1 (PSTG1)
Classification: HYDROLASE
Source organism: Paenibacillus relictisesami
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2023-05-03
Authors: Yanai, T., Imaizumi, R., Takahashi, Y., Katsumura, E., Yamamoto, M., Nakayama, T., Yamashita, S., Takeshita, K., Sakai, N., Matsuura, H.
PDB entry 8j9g: CrtSPARTA hetero-dimer bound with guide-target, state 1
Classification: DNA BINDING PROTEIN/DNA/RNA
Source organism: Thermoflavifilum thermophilum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-05-03
Authors: Li, Z.X., Guo, L.J., Huang, P.P., Xiao, Y.B., Chen, M.R.
PDB entry 8j9h: Cryo-EM structure of Euglena gracilis respiratory complex I, deactive state
Classification: ELECTRON TRANSPORT
Source organism: Euglena gracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2023-05-03
Authors: Wu, M.C., He, Z.X., Tian, H.T., Hu, Y.Q., Han, F.Z., Zhou, L.
PDB entry 8j9i: Cryo-EM structure of Euglena gracilis complex I, turnover state
Classification: ELECTRON TRANSPORT
Source organism: Euglena gracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.87 Å
Deposited: 2023-05-03
Authors: Wu, M.C., He, Z.X., Tian, H.T., Hu, Y.Q., Han, F.Z., Zhou, L.
PDB entry 8j9j: Cryo-EM structure of Euglena gracilis complex I, NADH state
Classification: ELECTRON TRANSPORT
Source organism: Euglena gracilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.03 Å
Deposited: 2023-05-03
Authors: Wu, M.C., He, Z.X., Tian, H.T., Hu, Y.Q., Han, F.Z., Zhou, L.
PDB entry 8j9k: Structure of basal beta-arrestin2
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-05-03
Authors: Maharana, J., Sarma, P., Yadav, M.K., Chami, M., Banerjee, R., Shukla, A.K.
PDB entry 8j9l: Crystal Structure of Human H-Ferritin variant 123F assembling in solution2
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2023-05-04
Authors: Chen, X., Zhao, G.
PDB entry 8j9m: Crystal Structure of Human H-Ferritin variant 123F assembling in solution3
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2023-05-04
Authors: Chen, X., Zhao, G.
PDB entry 8j9n: Gq bound FZD1 in ligand-free state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2023-05-04
Authors: Lin, X., Xu, F.
PDB entry 8j9o: Cryo-EM structure of inactive FZD1
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli; Homo sapiens; Mus; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-04
Authors: Lin, X., Xu, F.
PDB entry 8j9p: SPARTA dimer bound with guide-target
Classification: DNA BINDING PROTEIN/RNA/DNA
Source organism: Thermoflavifilum thermophilum; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2023-05-04
Authors: Li, Z.X., Guo, L.J., Huang, P.P., Xiao, Y.B., Chen, M.R.
PDB entry 8j9q: Crystal structure of UBR box of UBR4 apo
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2023-05-04
Authors: Jeong, D.-E., KIm, S.-J., Shin, H.-C.
PDB entry 8j9r: Crystal structure of UBR box of YIFS-UBR4
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2023-05-04
Authors: Jeong, D.-E., Kim, S.-J., Shin, H.-C.
PDB entry 8j9s: leucine zipper complex of AIMP1 and AIMP2
Classification: TRANSLATION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.01 Å
Deposited: 2023-05-04
Authors: Kim, D.K., Kang, B.S.