LiteFold/PDB huggingface dataset:
PDB entry 3kj4: Structure of rat Nogo receptor bound to 1D9 antagonist antibody
Classification: IMMUNE SYSTEM
Source organism: Mus musculus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-11-02
Authors: Silvian, L.F.
PDB entry 3kj6: Crystal structure of a Methylated beta2 Adrenergic Receptor-Fab complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2009-11-02
Authors: Bokoch, M.P., Zou, Y., Rasmussen, S.G.F., Liu, C.W., Nygaard, R., Rosenbaum, D.M., Fung, J.J., Choi, H.-J., Thian, F.S., Kobilka, T.S., Puglisi, J.D., Weis, W.I., Pardo, L., Prosser, S., Mueller, L., Kobilka, B.K.
PDB entry 3kj7: Crystal Structure of the Complex of C-lobe of Bovine Lactoferrin with Dextrin at 1.9 A Resolution
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2009-11-03
Authors: Mir, R., Vikram, G., Singh, N., Sinha, M., Sharma, S., Kaur, P., Singh, T.P.
PDB entry 3kjd: Human poly(ADP-ribose) polymerase 2, catalytic fragment in complex with an inhibitor ABT-888
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-11-03
Authors: Karlberg, T., Schutz, P., Arrowsmith, C.H., Berglund, H., Bountra, C., Collins, R., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Kallas, A., Kotenyova, T., Kotzsch, A., Kraulis, P., Nielsen, T.K., Moche, M., Nordlund, P., Nyman, T., Persson, C., Roos, A.K., Siponen, M.I., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Weigelt, J., Welin, M., Wisniewska, M., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3kje: Empty state of CooC1
Classification: HYDROLASE, METAL BINDING PROTEIN
Source organism: Carboxydothermus hydrogenoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-11-03
Authors: Jeoung, J.-H., Dobbek, H.
PDB entry 3kjf: Caspase 3 Bound to a covalent inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-11-03
Authors: Kamtekar, S., Watt, W., Finzel, B.C., Harris, M.S., Blinn, J., Wang, Z., Tomasselli, A.G.
PDB entry 3kjg: ADP-bound state of CooC1
Classification: HYDROLASE, METAL BINDING PROTEIN
Source organism: Carboxydothermus hydrogenoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-11-03
Authors: Jeoung, J.-H., Dobbek, H.
PDB entry 3kjh: Zn-bound state of CooC1
Classification: HYDROLASE, METAL BINDING PROTEIN
Source organism: Carboxydothermus hydrogenoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-03
Authors: Jeoung, J.-H., Dobbek, H.
PDB entry 3kji: Zn and ADP bound state of CooC1
Classification: HYDROLASE, METAL BINDING PROTEIN
Source organism: Carboxydothermus hydrogenoformans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2009-11-03
Authors: Jeoung, J.-H., Dobbek, H.
PDB entry 3kjj: Crystal structure of NMB1025, a member of YjgF protein family, from Neisseria meningitidis (hexagonal crystal form)
Classification: UNKNOWN FUNCTION
Source organism: Neisseria meningitidis serogroup B
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-03
Authors: Ren, J., Sainsbury, S., Owens, R.J., Oxford Protein Production Facility (OPPF)
PDB entry 3kjk: Crystal structure of NMB1025, a member of YjgF protein family, from Neisseria meningitidis (monoclinic crystal form)
Classification: UNKNOWN FUNCTION
Source organism: Neisseria meningitidis serogroup B
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2009-11-03
Authors: Ren, J., Sainsbury, S., Owens, R.J., Oxford Protein Production Facility (OPPF)
PDB entry 3kjl: Sgf11:Sus1 complex
Classification: TRANSCRIPTION
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-11-03
Authors: Stewart, M., Ellisdon, A.M.
PDB entry 3kjm: Leu492Ala mutant of Maize cytokinin oxidase/dehydrogenase complexed with phenylurea inhibitor CPPU
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Zea mays
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-03
Authors: Kopecny, D., Briozzo, P.
PDB entry 3kjn: Caspase 8 bound to a covalent inhibitor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-03
Authors: Kamtekar, S., Watt, W., Finzel, B.C., Harris, M.S., Blinn, J., Wang, Z., Tomasselli, A.G.
PDB entry 3kjo: Crystal Structure of hPOT1V2-dTrUd(AGGGTTAG)
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-03
Authors: Nandakumar, J., Cech, T.R., Podell, E.R.
PDB entry 3kjp: Crystal Structure of hPOT1V2-GGTTAGGGTTAG
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-03
Authors: Nandakumar, J., Cech, T.R., Podell, E.R.
PDB entry 3kjq: Caspase 8 with covalent inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-03
Authors: Kamtekar, S., Watt, W., Finzel, B.C., Harris, M.S., Blinn, J., Wang, Z., Tomasselli, A.G.
PDB entry 3kjr: Crystal structure of dihydrofolate reductase/thymidylate synthase from Babesia bovis determined using SlipChip based microfluidics
Classification: TRANSFERASE
Source organism: Babesia bovis T2Bo
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-11-03
Authors: Li, L., Du, W., Edwards, T.E., Staker, B.L., Phan, I., Stacy, R., Ismagilov, R.F., Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3kjs: Crystal Structure of T. cruzi DHFR-TS with 3 high affinity DHFR inhibitors: DQ1 inhibitor complex
Classification: Oxidoreductase,Transferase
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-11-03
Authors: Schormann, N., Senkovich, O., Chattopadhyay, D.
PDB entry 3kjt: Stimulation of the maltose transporter by a mutant sucrose binding protein gives insights into ABC transporter coupling
Classification: TRANSPORT PROTEIN
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2009-11-03
Authors: Gould, A.D., Shilton, B.H.
PDB entry 3kjv: HIV-1 reverse transcriptase in complex with DNA
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-11-03
Authors: Lansdon, E.B.
PDB entry 3kjx: Crystal structure of a transcriptional regulator, Lacl family protein from Silicibacter pomeroyi
Classification: TRANSCRIPTION REGULATOR
Source organism: Silicibacter pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2009-11-03
Authors: Palani, K., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3kjy: Crystal structure of reduced HOMO SAPIENS CLIC3
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-11-04
Authors: Littler, D.R., Curmi, P.M.G., Breit, S.N., Perrakis, A.
PDB entry 3kjz: Crystal structure of native peptidyl-tRNA hydrolase from Mycobacterium smegmatis
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-11-04
Authors: Kumar, A., Singh, N., Yadav, R., Prem Kumar, R., Sharma, S., Arora, A., Singh, T.P.
PDB entry 3kk0: Crystal structure of partially folded intermediate state of peptidyl-tRNA hydrolase from Mycobacterium smegmatis
Classification: HYDROLASE
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2009-11-04
Authors: Kumar, A., Singh, N., Yadav, R., Sharma, S., Arora, A., Singh, T.P.
PDB entry 3kk1: HIV-1 reverse transcriptase-DNA complex with nuceotide inhibitor GS-9148-diphosphate bound in nucleotide site
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-11-04
Authors: Lansdon, E.B.
PDB entry 3kk2: HIV-1 reverse transcriptase-DNA complex with dATP bound in the nucleotide binding site
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-11-04
Authors: Lansdon, E.B.
PDB entry 3kk3: HIV-1 reverse transcriptase-DNA complex with GS-9148 terminated primer
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-11-04
Authors: Lansdon, E.B.
PDB entry 3kk4: uncharacterized protein BP1543 from Bordetella pertussis Tohama I
Classification: structural genomics, unknown function
Source organism: Bordetella pertussis Tohama I
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2009-11-04
Authors: Chang, C., Chhor, G., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3kk5: Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction of the virophage Sputnik
Classification: VIRUS
Source organism: Acanthamoeba polyphaga
Experimental method: ELECTRON MICROSCOPY
Resolution: 10.6 Å
Deposited: 2009-11-04
Authors: Sun, S., Rossmann, M.G.
PDB entry 3kk6: Crystal Structure of Cyclooxygenase-1 in complex with celecoxib
Classification: OXIDOREDUCTASE
Source organism: Ovis aries
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2009-11-04
Authors: Sidhu, R.S.
PDB entry 3kk7: Crystal structure of Putative cell invasion protein with MAC/Perforin domain (NP_812351.1) from BACTERIODES THETAIOTAOMICRON VPI-5482 at 2.46 A resolution
Classification: CELL INVASION
Source organism: Bacteroides thetaiotaomicron VPI-5482
Experimental method: X-RAY DIFFRACTION
Resolution: 2.46 Å
Deposited: 2009-11-04
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kk8: CaMKII Substrate Complex A
Classification: TRANSFERASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2009-11-04
Authors: Kuriyan, J., Chao, L.H., Pellicena, P., Deindl, S., Barclay, L.A., Schulman, H.
PDB entry 3kk9: CaMKII Substrate Complex B
Classification: TRANSFERASE
Source organism: Caenorhabditis elegans
Experimental method: X-RAY DIFFRACTION
Resolution: 3.206 Å
Deposited: 2009-11-04
Authors: Kuriyan, J., Chao, L.H., Pellicena, P., Deindl, S., Barclay, L.A., Schulman, H.
PDB entry 3kka: Co-crystal structure of the sam domains of EPHA1 AND EPHA2
Classification: TRANSFERASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-11-05
Authors: Walker, J.R., Yermekbayeva, L., Butler-Cole, C., Weigelt, J., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
PDB entry 3kkb: The crystal structure of a two-component sensor domain from Pseudomonas aeruginosa PA01
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.881 Å
Deposited: 2009-11-05
Authors: Tan, K., Chhor, G., Buck, K., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3kkc: The crystal structure OF TetR transcriptional regulator from Streptococcus agalactiae 2603V
Classification: transcription regulator
Source organism: Streptococcus agalactiae 2603V/R
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-11-05
Authors: Tan, K., Hatzos, C., Morgan, T., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3kkd: Structure of a putative tetr transcriptional regulator (pa3699) from pseudomonas aeruginosa pa01
Classification: transcription regulator
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-11-05
Authors: Filippova, E.V., Chruszcz, M., Cymborowski, M., Skarina, T., Savchenko, A., Edwards, A., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3kke: Crystal structure of a LacI family transcriptional regulator from Mycobacterium smegmatis
Classification: transcription regulator
Source organism: Mycobacterium smegmatis str. MC2 155
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-11-05
Authors: Bonanno, J.B., Rutter, M., Bain, K.T., Do, J., Ozyurt, S., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3kkf: Crystal structure of Putative antibiotic biosynthesis monooxygenase (NP_810307.1) from Bacteriodes thetaiotaomicron VPI-5482 at 1.30 A resolution
Classification: OXIDOREDUCTASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2009-11-05
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kkg: Crystal structure of Putative SnoaL-like polyketide cyclase (YP_509242.1) from Jannaschia Sp. CCS1 at 1.40 A resolution
Classification: LYASE
Source organism: Jannaschia sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-11-05
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kki: PLP-Dependent Acyl-CoA transferase CqsA
Classification: TRANSFERASE
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-05
Authors: Kelly, R.C., Jeffrey, P.D., Hughson, F.M.
PDB entry 3kkj: X-ray structure of P. syringae q888a4 Oxidoreductase at resolution 2.5A, Northeast Structural Genomics Consortium target PsR10
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas syringae pv. tomato
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-11-05
Authors: Kuzin, A.P., Chen, Y., Forouhar, F., Vorobiev, S., Acton, T., Ma, L.C., Xiao, R., Montelione, G.T., Hunt, J.F., Tong, T., Northeast Structural Genomics Consortium (NESG)
PDB entry 3kkk: Y92C catalytic residue mutant of Phosphoglycerate Mutase from Plasmodium falciparum
Classification: ISOMERASE
Source organism: Plasmodium falciparum 3D7
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2009-11-05
Authors: Larson, E.T., Merritt, E.A., Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
PDB entry 3kkl: Crystal structure of functionally unknown HSP33 from Saccharomyces cerevisiae
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2009-11-05
Authors: Hwang, K.Y., Sung, M.W., Lee, W.H.
PDB entry 3kkm: Crystal structure of H-Ras T35S in complex with GppNHp
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-11-06
Authors: Muraoka, S., Shima, F., Liao, J., Ijiri, Y., Matsumoto, K., Ye, M., Inoue, T., Kataoka, T.
PDB entry 3kkn: Crystal structure of H-Ras T35S in complex with GppNHp
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.09 Å
Deposited: 2009-11-06
Authors: Muraoka, S., Shima, F., Liao, J., Ijiri, Y., Matsumoto, K., Ye, M., Inoue, T., Kataoka, T.
PDB entry 3kko: Crystal structure of M-Ras P40D/D41E/L51R in complex with GppNHp
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-06
Authors: Muraoka, S., Shima, F., Liao, J., Ijiri, Y., Matsumoto, K., Ye, M., Inoue, T., Kataoka, T.
PDB entry 3kkp: Crystal structure of M-Ras P40D in complex with GppNHp
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2009-11-06
Authors: Muraoka, S., Shima, F., Liao, J., Ijiri, Y., Matsumoto, K., Ye, M., Inoue, T., Kataoka, T.
PDB entry 3kkq: Crystal structure of M-Ras P40D in complex with GDP
Classification: SIGNALING PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2009-11-06
Authors: Muraoka, S., Shima, F., Liao, J., Ijiri, Y., Matsumoto, K., Ye, M., Inoue, T., Kataoka, T.
PDB entry 3kkr: Crystal structure of catalytic core domain of BIV integrase in crystal form I
Classification: DNA BINDING PROTEIN
Source organism: Bovine immunodeficiency virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.453 Å
Deposited: 2009-11-06
Authors: Shen, Y.
PDB entry 3kks: Crystal structure of catalytic core domain of BIV integrase in crystal form II
Classification: DNA BINDING PROTEIN
Source organism: Bovine immunodeficiency virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-11-06
Authors: Shen, Y.
PDB entry 3kkt: Crystal structure of human PDE4b with 5-[3-[(1S,2S,4R)-Bicyclo[2.2.1]hept-2-yloxy]-4-methoxyp henyl]tetrahydro-2(1H)-pyrimidinone reveals ordering of the C-terminal helix residues 502-509.
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2009-11-06
Authors: Cheng, R.K.Y., Crawley, L., Barker, J., Whittaker, M.
PDB entry 3kku: Cruzain in complex with a non-covalent ligand
Classification: HYDROLASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2009-11-06
Authors: Ferreira, R.S., Eidam, O., Shoichet, B.K.
PDB entry 3kkv: Structure of PKA with a protein Kinase B-selective inhibitor.
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Bos taurus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-06
Authors: Elkins, P.A., Concha, N.O.
PDB entry 3kkw: Crystal structure of His-tagged form of PA4794 protein
Classification: TRANSFERASE
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2009-11-06
Authors: Majorek, K.A., Chruszcz, M., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3kkx: Neutron structure of human carbonic anhydrase II
Classification: LYASE
Source organism: Homo sapiens
Experimental method: NEUTRON DIFFRACTION
Resolution: 2 Å
Deposited: 2009-11-06
Authors: Fisher, S.Z., Langan, P.A.
PDB entry 3kky: Structure of Manganese Superoxide Dismutase from Deinococcus Radiodurans in the orthorhombic space group P212121: A case study of mistaken identity
Classification: METAL BINDING PROTEIN
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-06
Authors: Govindasamy, L., Mikulski, R., McKenna, M.A., Silverman, D.N., McKenna, R.
PDB entry 3kkz: Crystal structure of the Q5LES9_BACFN protein from Bacteroides fragilis. Northeast Structural Genomics Consortium Target BfR250.
Classification: TRANSFERASE
Source organism: Bacteroides fragilis NCTC 9343
Experimental method: X-RAY DIFFRACTION
Resolution: 1.677 Å
Deposited: 2009-11-06
Authors: Vorobiev, S., Neely, H., Seetharaman, J., Wang, D., Ciccosanti, C., Foote, E.L., Sahdev, S., Acton, T.B., Xiao, R., Everett, J.K., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
PDB entry 3kl0: Crystal structure of the glucuronoxylan xylanohydrolase XynC from Bacillus subtilis
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2009-11-06
Authors: St John, F.J., Hurlbert, J.C., Pozharski, E.
PDB entry 3kl1: Crystal structure of abscisic acid receptor PYL2 at 1.55 A
Classification: HORMONE RECEPTOR
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2009-11-06
Authors: Zhang, X., Wang, G., Chen, Z.
PDB entry 3kl2: Crystal structure of a putative isochorismatase from Streptomyces avermitilis
Classification: structural genomics, unknown function
Source organism: Streptomyces avermitilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-11-06
Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Chang, S., Ozyurt, S., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3kl3: Crystal structure of Ligand bound XynC
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2009-11-06
Authors: St John, F.J., Hurlbert, J.C., Pozharski, E.
PDB entry 3kl4: Recognition of a signal peptide by the signal recognition particle
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae; Sulfolobus solfataricus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å
Deposited: 2009-11-06
Authors: Janda, C.Y., Nagai, K., Li, J., Oubridge, C.
PDB entry 3kl5: Structure Analysis of a Xylanase From Glycosyl Hydrolase Family Thirty: Carbohydrate Ligand Complexes Reveal this Family of Enzymes Unique Mechanism of Substrate Specificity and Recognition
Classification: HYDROLASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2009-11-06
Authors: St John, F.J., Hurlbert, J.C., Pozharski, E.
PDB entry 3kl6: Discovery of Tetrahydropyrimidin-2(1H)-one derivative TAK-442: A potent, selective and orally active factor Xa inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2009-11-06
Authors: Aertgeerts, K.
PDB entry 3kl7: Crystal structure of Putative metal-dependent hydrolase (YP_001302908.1) from Parabacteroides distasonis ATCC 8503 at 2.30 A resolution
Classification: HYDROLASE
Source organism: Parabacteroides distasonis ATCC 8503
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-11-06
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3kl8: CaMKIINtide Inhibitor Complex
Classification: TRANSFERASE/ TRANSFERASE INHIBITOR
Source organism: Caenorhabditis elegans; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.372 Å
Deposited: 2009-11-06
Authors: Kuriyan, J., Chao, L.H., Pellicena, P., Deindl, S., Barclay, L.A., Schulman, H.
PDB entry 3kl9: Crystal structure of PepA from Streptococcus pneumoniae
Classification: HYDROLASE
Source organism: Streptococcus pneumoniae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-11-07
Authors: Kim, K.K., Lee, S., Kim, D.
PDB entry 3kla: Ca2+ release from the endoplasmic reticulum of NY-ESO-1 specific T cells is modulated by the affinity of T cell receptor and by the use of the CD8 co-receptor
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-11-07
Authors: Chen, J.L., Morgan, A.J., Stewart-Jones, G., Shepherd, D., Bossi, G., Wooldridge, L.
PDB entry 3klb: Crystal structure of Putative Flavoprotein in Complex with FMN (YP_213683.1) from Bacteroides fragilis NCTC 9343 at 1.75 A resolution
Classification: FLAVOPROTEIN
Source organism: Bacteroides fragilis NCTC 9343
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2009-11-07
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3klc: Crystal structure of hyperthermophilic nitrilase
Classification: HYDROLASE
Source organism: Pyrococcus abyssi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2009-11-07
Authors: Raczynska, J., Vorgias, C., Antranikian, G., Rypniewski, W.
PDB entry 3kld: PTPRG CNTN4 complex
Classification: CELL ADHESION
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.999 Å
Deposited: 2009-11-07
Authors: Bouyain, S.
PDB entry 3kle: Crystal structure of AZT-resistant HIV-1 Reverse Transcriptase crosslinked to a DSDNA with a bound excision product, AZTPPPPA
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2009-11-07
Authors: Tu, X., Das, K., Sarafianos, S.G., Arnold, E.
PDB entry 3klf: Crystal structure of wild-type HIV-1 Reverse Transcriptase crosslinked to a DSDNA with a bound excision product, AZTPPPPA
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2009-11-07
Authors: Tu, X., Das, K., Sarafianos, S.G., Arnold, E.
PDB entry 3klg: Crystal structure of AZT-resistant HIV-1 Reverse Transcriptase crosslinked to pre-translocation AZTMP-Terminated DNA (COMPLEX N)
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.65 Å
Deposited: 2009-11-07
Authors: Tu, X., Sarafianos, S.G., Arnold, E.
PDB entry 3klh: Crystal structure of AZT-Resistant HIV-1 Reverse Transcriptase crosslinked to post-translocation AZTMP-Terminated DNA (COMPLEX P)
Classification: TRANSFERASE/DNA
Source organism: Human immunodeficiency virus type 1; MUS MUSCULUS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-11-07
Authors: Tu, X., Sarafianos, S.G., Arnold, E.
PDB entry 3kli: Crystal structure of unliganded AZT-resistant HIV-1 Reverse Transcriptase
Classification: TRANSFERASE
Source organism: Human immunodeficiency virus type 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2009-11-08
Authors: Tu, X., Sarafianos, S.G., Arnold, E.
PDB entry 3klj: Crystal structure of NADH:rubredoxin oxidoreductase from Clostridium acetobutylicum
Classification: OXIDOREDUCTASE
Source organism: Clostridium acetobutylicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-11-08
Authors: Nishikawa, K., Shomura, Y., Kawasaki, S., Niimura, Y., Higuchi, Y.
PDB entry 3klk: Crystal structure of Lactobacillus reuteri N-terminally truncated glucansucrase GTF180 in triclinic apo- form
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2009-11-08
Authors: Vujicic-Zagar, A., Pijning, T., Kralj, S., Eeuwema, W., Dijkhuizen, L., Dijkstra, B.W.
PDB entry 3kll: Crystal structure of Lactobacillus reuteri N-terminally truncated glucansucrase GTF180-maltose complex
Classification: TRANSFERASE
Source organism: Lactobacillus reuteri
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-11-08
Authors: Vujicic-Zagar, A., Pijning, T., Kralj, S., Eeuwema, W., Dijkhuizen, L., Dijkstra, B.W.
PDB entry 3klm: 17beta-HSD1 in complex with DHT
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-11-08
Authors: Mazumdar, M.
PDB entry 3kln: Vibrio cholerae VpsT
Classification: TRANSCRIPTION
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 3.078 Å
Deposited: 2009-11-08
Authors: Krasteva, P.V., Navarro, V.A.S., Sondermann, H.
PDB entry 3klo: Vibrio cholerae VpsT bound to c-di-GMP
Classification: TRANSCRIPTION
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.802 Å
Deposited: 2009-11-08
Authors: Krasteva, P.V., Navarro, V.A.S., Sondermann, H.
PDB entry 3klp: 17beta-HSD1 in complex with A-diol
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-11-08
Authors: Mazumdar, M., Lin, S.-X.
PDB entry 3klq: Crystal Structure of the Minor Pilin FctB from Streptococcus pyogenes 90/306S
Classification: CELL ADHESION
Source organism: Streptococcus pyogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-08
Authors: Linke, C., Young, P.G., Bunker, R.D., Caradoc-Davies, T.T., Baker, E.N.
PDB entry 3klr: Bovine H-protein at 0.88 angstrom resolution
Classification: OXIDOREDUCTASE
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 0.88 Å
Deposited: 2009-11-09
Authors: Higashiura, A., Kurakane, T., Matsuda, M., Suzuki, M., Inaka, K., Sato, M., Tanaka, H., Fujiwara, K., Nakagawa, A.
PDB entry 3kls: Structure of complement C5 in complex with SSL7
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2009-11-09
Authors: Laursen, N.S., Gordon, N., Hermans, S., Lorenz, N., Jackson, N., Wines, B., Spillner, E., Christensen, J.B., Jensen, M., Fredslund, F., Bjerre, M., Sottrup-Jensen, L., Fraser, J.D., Andersen, G.R.
PDB entry 3klt: Crystal structure of a vimentin fragment
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-11-09
Authors: Nicolet, S., Strelkov, S.V.
PDB entry 3klu: Crystal structure of the protein yqbn. northeast structural genomics consortium target sr445.
Classification: structural genomics, unknown function
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-11-09
Authors: Kuzin, A.P., Su, M., Seetharaman, J., Wang, D., Fang, Y., Cunningham, K., Ma, L.-C., Xiao, R., Liu, M., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3klv: M296I G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA
Classification: Transferase/RNA
Source organism: Foot-and-mouth disease virus - type C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-11-09
Authors: Ferrer-Orta, C., Sierra, M., Agudo, R., Perez-Luque, R., Arias, A., Verdaguer, N.
PDB entry 3klw: Crystal structure of primosomal replication protein n from Bordetella pertussis. northeast structural genomics consortium target ber132.
Classification: DNA BINDING PROTEIN
Source organism: Bordetella pertussis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-11-09
Authors: Kuzin, A.P., Neely, H., Vorobiev, S.M., Seetharaman, J., Forouhar, F., Wang, H., Janjua, H., Maglaqui, M., Xiao, T., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3klx: Crystal structure of native abscisic acid receptor PYL3
Classification: HORMONE RECEPTOR
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-11-09
Authors: Zhang, X., Wang, G., Chen, Z.
PDB entry 3kly: Pentameric formate channel
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-11-09
Authors: Waight, A.B., Wang, D.N., New York Consortium on Membrane Protein Structure (NYCOMPS)
PDB entry 3klz: Pentameric formate channel with formate bound
Classification: MEMBRANE PROTEIN
Source organism: Vibrio cholerae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-11-09
Authors: Waight, A.B., Wang, D.N., New York Consortium on Membrane Protein Structure (NYCOMPS)
PDB entry 3km0: 17betaHSD1 in complex with 3beta-diol
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-11-09
Authors: Mazumdar, M., Lin, S.-X.
PDB entry 3km1: ZINC-Reconstituted TOMATO CHLOROPLAST SUPEROXIDE DISMUTASE
Classification: OXIDOREDUCTASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-11-09
Authors: Galaleldeen, A., Taylor, A.B., Thomas, S.T., Hart, P.J.
PDB entry 3km2: As-isolated TOMATO CHLOROPLAST SUPEROXIDE DISMUTASE
Classification: OXIDOREDUCTASE
Source organism: Solanum lycopersicum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2009-11-09
Authors: Galaleldeen, A., Taylor, A.B., Hart, P.J.
PDB entry 3km3: Crystal structure of eoxycytidine triphosphate deaminase from anaplasma phagocytophilum at 2.1A resolution
Classification: HYDROLASE
Source organism: Anaplasma phagocytophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-11-09
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3km4: Optimization of Orally Bioavailable Alkyl Amine Renin Inhibitors
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-09
Authors: Wu, Z., McKeever, B.M.
PDB entry 3km5: Crystal Structure Analysis of the K2 Cleaved Adhesin Domain of Lys-gingipain (Kgp)
Classification: CELL INVASION
Source organism: Porphyromonas gingivalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-11-09
Authors: Li, N., Collyer, C.A., Hunter, N.
PDB entry 3km6: Crystal Structure of the Human GST Pi C47S/Y108V Double Mutant in Complex with the Ethacrynic Acid-Glutathione Conjugate
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-11-10
Authors: Parker, L.J.
PDB entry 3km8: Crystal structuore of adenosine deaminase from mus musculus complexed with 9-deazainosine
Classification: HYDROLASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-11-10
Authors: Fan, X., Gao, Y.
PDB entry 3km9: Structure of complement C5 in complex with the C-terminal beta-grasp domain of SSL7
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Staphylococcus aureus subsp. aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 4.2 Å
Deposited: 2009-11-10
Authors: Laursen, N.S., Gordon, N., Hermans, S., Lorenz, N., Jackson, N., Wines, B., Spillner, E., Christensen, J.B., Jensen, M., Fredslund, F., Bjerre, M., Sottrup-Jensen, L., Fraser, J.D., Andersen, G.R.
PDB entry 3kma: Crystal Structure of vSET under Condition A
Classification: VIRAL PROTEIN
Source organism: Paramecium bursaria Chlorella virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2009-11-10
Authors: Wei, H., Zhou, M.M.
PDB entry 3kmb: COMPLEX OF 3'-SULFO-LEWIS-X WITH A SELECTIN-LIKE MUTANT OF MANNOSE-BINDING PROTEIN A
Classification: LECTIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 1996-11-07
Authors: Ng, K.K.-S., Weis, W.I.
PDB entry 3kmc: Crystal structure of catalytic domain of TACE with tartrate-based inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-10
Authors: Orth, P.
PDB entry 3kmd: Crystal structure of the p53 core domain bound to a full consensus site as a self-assembled tetramer
Classification: DNA BINDING PROTEIN/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2009-11-10
Authors: Chen, Y., Dey, R., Chen, L.
PDB entry 3kme: Crystal structure of catalytic domain of TACE with phenyl-pyrrolidinyl-tartrate inhibitor
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-11-10
Authors: Orth, P.
PDB entry 3kmf: Room Temperature Time-of-Flight Neutron Diffraction Study of Deoxy Human Normal Adult Hemoglobin
Classification: OXYGEN STORAGE, OXYGEN TRANSPORT
Source organism: Homo sapiens
Experimental method: NEUTRON DIFFRACTION
Resolution: 2 Å
Deposited: 2009-11-10
Authors: Kovalevsky, A.Y., Morimoto, Y., Chatake, T.
PDB entry 3kmg: The X-ray Crystal Structure of PPAR-gamma in Complex with an Indole Derivative Modulator, GSK538, and an SRC-1 Peptide
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-11-10
Authors: Gampe, R.
PDB entry 3kmh: Crystal Structure of a Novel Sugar Isomerase from E. coli O157:H7
Classification: ISOMERASE
Source organism: Escherichia coli O157:H7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2009-11-10
Authors: van Staalduinen, L.M., Jia, Z., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
PDB entry 3kmi: Crystal structure of putative membrane protein from Clostridium difficile 630
Classification: MEMBRANE PROTEIN
Source organism: Clostridium difficile
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2009-11-10
Authors: Chang, C., Rakowski, E., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3kmj: Crystal structure of vSET under condition B
Classification: VIRAL PROTEIN
Source organism: Paramecium bursaria Chlorella virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2009-11-10
Authors: Wei, H., Zhou, M.M.
PDB entry 3kml: Circular Permutant of the Tobacco Mosaic Virus
Classification: VIRAL PROTEIN
Source organism: Tobacco mosaic virus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.011 Å
Deposited: 2009-11-10
Authors: Duderstadt, K.E., Dedeo, M.T., Francis, M.B., Berger, J.M.
PDB entry 3kmm: Structure of human LCK kinase with a small molecule inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-11-10
Authors: Graves, B.J., Surgenor, A., Harris, W., Smith, I., Orchard, S., Flotow, H., Murray, E.
PDB entry 3kmn: Crystal Structure of the Human Apo GST Pi C47S/Y108V Double Mutant
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-11
Authors: Parker, L.J.
PDB entry 3kmo: Crystal Structure of the Human GST Pi C47S/Y108V Double Mutant in Complex with the Ethacrynic Acid-Glutathione Conjugate (Grown in the Absence of the Reducing Agent DTT)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2009-11-11
Authors: Parker, L.J.
PDB entry 3kmp: Crystal Structure of SMAD1-MH1/DNA complex
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-11-11
Authors: Baburajendran, N., Palasingam, P., Narasimhan, K., Jauch, R., Kolatkar, P.R.
PDB entry 3kmq: G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, tetragonal structure
Classification: TRANSFERASE/RNA
Source organism: Foot-and-mouth disease virus - type C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2009-11-11
Authors: Ferrer-Orta, C., Verdaguer, N., Perez-Luque, R.
PDB entry 3kmr: Crystal structure of RARalpha ligand binding domain in complex with an agonist ligand (Am580) and a coactivator fragment
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-11
Authors: Bourguet, W., Teyssier, C.
PDB entry 3kms: G62S mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA trigonal structure
Classification: Transferase/RNA
Source organism: Foot-and-mouth disease virus - type C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2009-11-11
Authors: Ferrer-Orta, C., Verdaguer, N., Perez-Luque, R.
PDB entry 3kmt: Crystal structure of vSET/SAH/H3 ternary complex
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Paramecium bursaria Chlorella virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2009-11-11
Authors: Wei, H., Zhou, M.M.
PDB entry 3kmu: Crystal structure of the ILK/alpha-parvin core complex (apo)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-11
Authors: Fukuda, K., Qin, J.
PDB entry 3kmv: Crystal structure of CBM42A from Clostridium thermocellum
Classification: SUGAR BINDING PROTEIN
Source organism: Clostridium thermocellum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2009-11-11
Authors: Santos-Silva, T., Alves, V.D., Prates, J.A.M., Fontes, C.M.G.A., Romao, M.J.
PDB entry 3kmw: Crystal structure of the ILK/alpha-parvin core complex (MgATP)
Classification: CELL ADHESION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-11-11
Authors: Fukuda, K., Qin, J.
PDB entry 3kmx: Structure of BACE bound to SCH346572
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2009-11-11
Authors: Strickland, C., Wang, Y.
PDB entry 3kmy: Structure of BACE bound to SCH12472
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-11
Authors: Strickland, C., Wang, Y.
PDB entry 3kmz: Crystal structure of RARalpha ligand binding domain in complex with the inverse agonist BMS493 and a corepressor fragment
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2009-11-11
Authors: Bourguet, W., le Maire, A.
PDB entry 3kn0: Structure of BACE bound to SCH708236
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-11
Authors: Strickland, C., Wang, Y.
PDB entry 3kn1: Crystal Structure of Golgi Phosphoprotein 3 N-term Truncation Variant
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2009-11-11
Authors: Schmitz, K.R., Bessman, N.J., Setty, T.G., Ferguson, K.M.
PDB entry 3kn2: HCV NS3 Protease Domain with ketoamide inhibitor
Classification: HYDROLASE
Source organism: Hepatitis C virus subtype 1a; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2009-11-11
Authors: Nair, L.G., Sannigrahi, M., Pinto, P., Bogen, S., Chen, K.X., Njoroge, G., Prongay, A.
PDB entry 3kn3: Crystal Structure of LysR Substrate Binding Domain (25-263) of Putative Periplasmic Protein from Wolinella succinogenes
Classification: TRANSCRIPTION
Source organism: Wolinella succinogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 2.412 Å
Deposited: 2009-11-11
Authors: Kim, Y., Volkart, L., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3kn4: AGAO 6-phenyl-2,3-hexadienylamine complex
Classification: OXIDOREDUCTASE
Source organism: Arthrobacter globiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2009-11-12
Authors: Nguyen, Y.H., Ernberg, K.E., Guss, J.M.
PDB entry 3kn5: Crystal structure of the C-terminal kinase domain of msk1 in complex with AMP-PNP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2009-11-12
Authors: D'Angelo, I., Malakhova, M., Dong, Z.
PDB entry 3kn6: Crystal structure of the C-terminal kinase domain of MSK1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2009-11-12
Authors: D'Angelo, I., Malakhova, M., Dong, Z.
PDB entry 3kn7: Crystal Structure of Haemophilus influenzae Y195A mutant Holo Ferric ion-Binding Protein A
Classification: METAL BINDING PROTEIN
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2009-11-12
Authors: Shouldice, S.R., Schryvers, A.B.
PDB entry 3kn8: Crystal Structure of Haemophilus influenzae Y196A mutant Holo Ferric ion-Binding Protein A
Classification: METAL BINDING PROTEIN
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2009-11-12
Authors: Shouldice, S.R., Schryvers, A.B.
PDB entry 3kna: M296I mutant of foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA
Classification: Transferase/RNA
Source organism: Foot-and-mouth disease virus - type C; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2009-11-12
Authors: Ferrer-Orta, C., Verdaguer, N., Perez-Luque, R.
PDB entry 3knb: Crystal structure of the titin C-terminus in complex with obscurin-like 1
Classification: STRUCTURAL PROTEIN/STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2009-11-12
Authors: Sauer, F., Vahokoski, J., Wilmanns, M.
PDB entry 3knc: Crystal structure of the CeNA-RNA hybrid octamer ce(GCGTAGCG):r(CGCUACGC)
Classification: RNA/CYCLOHEXENE-RNA HYBRID
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2009-11-12
Authors: Ovaere, M., Van Meervelt, L.
PDB entry 3knd: TPX2:importin-alpha complex
Classification: PROTEIN TRANSPORT
Source organism: Mus musculus; Xenopus laevis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.151 Å
Deposited: 2009-11-12
Authors: Stewart, M.
PDB entry 3kne: Carbonic Anhydrase II H64C mutant in complex with an in situ formed triazole
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2009-11-12
Authors: Schulze-Wischeler, J., Heine, A., Klebe, G.
PDB entry 3knf: Crystal structure of D-Tyr-tRNA(Tyr) deacylase from Plasmodium falciparum
Classification: HYDROLASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2009-11-12
Authors: Manickam, Y., Bhatt, T.K., Sharma, A.
PDB entry 3kng: Crystal structure of SnoaB, a cofactor-independent oxygenase from Streptomyces nogalater, determined to 1.9 resolution
Classification: OXIDOREDUCTASE
Source organism: Streptomyces nogalater
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-12
Authors: Koskiniemi, H., Grocholski, T., Lindqvist, Y., Mantsala, P., Niemi, J., Schneider, G.
PDB entry 3knp: Crystal structure of DTD from Plasmodium falciparum
Classification: HYDROLASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2009-11-12
Authors: Manickam, Y., Bhatt, T.K., Sharma, A.
PDB entry 3knq: Beta Turn Optimization of the Gene-3-Protein of Filamentous Phage Fd
Classification: VIRAL PROTEIN
Source organism: Enterobacteria phage fd
Experimental method: X-RAY DIFFRACTION
Resolution: 2.13 Å
Deposited: 2009-11-12
Authors: Jakob, R.P., Dobbek, H.
PDB entry 3knr: Bacillus cereus metallo-beta-lactamase Cys221Asp mutant, 1 mM Zn(II)
Classification: HYDROLASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2009-11-12
Authors: Medrano Martin, F.J., Gonzalez, J.M., Vila, A.J.
PDB entry 3kns: Bacillus cereus metallo-beta-lactamase Cys221Asp mutant, 20 mM Zn(II)
Classification: HYDROLASE
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2009-11-12
Authors: Medrano Martin, F.J., Gonzalez, J.M., Vila, A.J.
PDB entry 3knt: Crystal structure of Methanocaldococcus jannaschii 8-oxoguanine glycosylase/lyase in complex with 15mer DNA containing 8-oxoguanine
Classification: HYDROLASE, LYASE/DNA
Source organism: Methanocaldococcus jannaschii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2009-11-12
Authors: Faucher, F., Doublie, S.
PDB entry 3knu: Crystal structure of tRNA (guanine-N1)-methyltransferase from Anaplasma phagocytophilum
Classification: TRANSFERASE
Source organism: Anaplasma phagocytophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2009-11-12
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3knv: Crystal structure of the RING and first zinc finger domains of TRAF2
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2009-11-12
Authors: Yin, Q., Wu, H.