LiteFold/PDB huggingface dataset:
PDB entry 2y3a: Crystal structure of p110beta in complex with icSH2 of p85beta and the drug GDC-0941
Classification: TRANSFERASE
Source organism: MUS MUSCULUS
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2010-12-20
Authors: Zhang, X., Vadas, O., Perisic, O., Williams, R.L.
PDB entry 2y3b: Co-bound form of Cupriavidus metallidurans CH34 CnrXs
Classification: METAL BINDING PROTEIN
Source organism: CUPRIAVIDUS METALLIDURANS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.554 Å
Deposited: 2010-12-20
Authors: Trepreau, J., Girard, E., Maillard, A.P., de Rosny, E., Petit-Haertlein, I., Kahn, R., Coves, J.
PDB entry 2y3c: Treponema denticola variable protein 1
Classification: UNKNOWN FUNCTION
Source organism: TREPONEMA DENTICOLA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2010-12-20
Authors: Le Coq, J., Ghosh, P.
PDB entry 2y3d: Zn-bound form of Cupriavidus metallidurans CH34 CnrXs
Classification: METAL BINDING PROTEIN
Source organism: CUPRIAVIDUS METALLIDURANS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2010-12-20
Authors: Trepreau, J., Girard, E., Maillard, A.P., de Rosny, E., Petit-Haertlein, I., Kahn, R., Coves, J.
PDB entry 2y3e: Traptavidin, apo-form
Classification: BIOTIN-BINDING PROTEIN
Source organism: STREPTOMYCES AVIDINII
Experimental method: X-RAY DIFFRACTION
Resolution: 1.449 Å
Deposited: 2010-12-20
Authors: Chivers, C.E., Koner, A.L., Lowe, E.D., Howarth, M.
PDB entry 2y3f: Traptavidin, biotin bound form
Classification: BIOTIN-BINDING PROTEIN
Source organism: STREPTOMYCES AVIDINII
Experimental method: X-RAY DIFFRACTION
Resolution: 1.493 Å
Deposited: 2010-12-20
Authors: Chivers, C.E., Koner, A.L., Lowe, E.D., Howarth, M.
PDB entry 2y3g: Se-Met form of Cupriavidus metallidurans CH34 CnrXs
Classification: METAL BINDING PROTEIN
Source organism: CUPRIAVIDUS METALLIDURANS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2010-12-20
Authors: Trepreau, J., Girard, E., Maillard, A.P., de Rosny, E., Petit-Haertlein, I., Kahn, R., Coves, J.
PDB entry 2y3h: E63Q mutant of Cupriavidus metallidurans CH34 CnrXs
Classification: METAL BINDING PROTEIN
Source organism: CUPRIAVIDUS METALLIDURANS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.892 Å
Deposited: 2010-12-20
Authors: Trepreau, J., Girard, E., Maillard, A.P., de Rosny, E., Petit-Haertlein, I., Kahn, R., Coves, J.
PDB entry 2y3i: The structure of the fully closed conformation of human PGK in complex with L-ADP, 3PG and the TSA aluminium tetrafluoride
Classification: TRANSFERASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2010-12-21
Authors: Bowler, M.W., Chaloin, L., Lionne, C.
PDB entry 2y3j: Structure of segment AIIGLM from the amyloid-beta peptide (Ab, residues 30-35)
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2010-12-21
Authors: Colletier, J.P., Laganowsky, A., Sawaya, M.R., Eisenberg, D.
PDB entry 2y3k: Structure of segment MVGGVVIA from the amyloid-beta peptide (Ab, residues 35-42), alternate polymorph 1
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2010-12-21
Authors: Colletier, J.P., Laganowsky, A., Sawaya, M.R., Eisenberg, D.
PDB entry 2y3l: Structure of segment MVGGVVIA from the amyloid-beta peptide (Ab, residues 35-42), alternate polymorph 2
Classification: PROTEIN FIBRIL
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2010-12-21
Authors: Colletier, J.P., Laganowsky, A., Sawaya, M.R., Eisenberg, D.
PDB entry 2y3m: Structure of the extra-membranous domain of the secretin HofQ from Actinobacillus actinomycetemcomitans
Classification: TRANSPORT PROTEIN
Source organism: AGGREGATIBACTER ACTINOMYCETEMCOMITANS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2010-12-21
Authors: Tarry, M., Jaaskelainen, M., Tuominen, H., Ihalin, R., Hogbom, M.
PDB entry 2y3n: Type II cohesin-dockerin domain from Bacteroides cellolosolvens
Classification: STRUCTRUAL PROTEIN/HYDROLASE
Source organism: BACTEROIDES CELLULOSOLVENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2010-12-22
Authors: Viegas, A., Carvalho, A.L., Romao, M.J., Prates, J.A.M., Fontes, C.M.G.A.
PDB entry 2y3p: Crystal structure of N-terminal domain of GyrA with the antibiotic simocyclinone D8
Classification: ISOMERASE
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.62 Å
Deposited: 2010-12-22
Authors: Edwards, M.J., Flatman, R.H., Mitchenall, L.A., Stevenson, C.E.M., Le, T.B.K., Clarke, T.A., McKay, A.R., Fiedler, H.-P., Buttner, M.J., Lawson, D.M., Maxwell, A.
PDB entry 2y3q: 1.55A structure of apo bacterioferritin from E. coli
Classification: METAL BINDING PROTEIN
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2010-12-22
Authors: Hough, M.A., Antonyuk, S.V.
PDB entry 2y3r: Structure of the tirandamycin-bound FAD-dependent tirandamycin oxidase TamL in P21 space group
Classification: OXIDOREDUCTASE
Source organism: STREPTOMYCES SP. 307-9
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2010-12-22
Authors: Carlson, J.C., Li, S., Gunatilleke, S.S., Anzai, Y., Burr, D.A., Podust, L.M., Sherman, D.H.
PDB entry 2y3s: Structure of the tirandamycine-bound FAD-dependent tirandamycin oxidase TamL in C2 space group
Classification: OXIDOREDUCTASE
Source organism: STREPTOMYCES SP. 307-9
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2010-12-23
Authors: Carlson, J.C., Li, S., Gunatilleke, S.S., Anzai, Y., Burr, D.A., Podust, L.M., Sherman, D.H.
PDB entry 2y3u: Crystal structure of apo collagenase G from Clostridium histolyticum at 2.55 Angstrom resolution
Classification: HYDROLASE
Source organism: CLOSTRIDIUM HISTOLYTICUM
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2010-12-26
Authors: Eckhard, U., Brandstetter, H.
PDB entry 2y3v: N-terminal head domain of Danio rerio SAS-6
Classification: STRUCTURAL PROTEIN
Source organism: DANIO RERIO
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2010-12-27
Authors: van Breugel, M.
PDB entry 2y3w: N-terminal head domain and beginning of coiled coil domain of Danio rerio SAS-6
Classification: STRUCTURAL PROTEIN
Source organism: DANIO RERIO
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2010-12-27
Authors: van Breugel, M.
PDB entry 2y3x: Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, complexed with sulfate
Classification: HYDROLASE
Source organism: MUS MUSCULUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-01-04
Authors: Myllykoski, M., Kursula, P.
PDB entry 2y3y: Holo-Ni(II) HpNikR is a symmetric tetramer containing four canonic square-planar Ni(II) ions at physiological pH
Classification: TRANSCRIPTION
Source organism: HELICOBACTER PYLORI G27; UNIDENTIFIED
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2011-01-04
Authors: Benini, S., Cianci, M., Ciurli, S.
PDB entry 2y3z: Structure of Isopropylmalate dehydrogenase from Thermus thermophilus - apo enzyme
Classification: OXIDOREDUCTASE
Source organism: THERMUS THERMOPHILUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2011-01-04
Authors: Graczer, E., merlin, A., Singh, R.K., Manikandan, K., Zavodsky, P., Weiss, M.S., Vas, M.
PDB entry 2y40: Structure of Isopropylmalate dehydrogenase from Thermus thermophilus - complex with Mn
Classification: OXIDOREDUCTASE
Source organism: THERMUS THERMOPHILUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-01-04
Authors: Graczer, E., merlin, A., Singh, R.K., Manikandan, K., Zavodsky, P., Weiss, M.S., Vas, M.
PDB entry 2y41: Structure of Isopropylmalate dehydrogenase from Thermus thermophilus - complex with IPM and MN
Classification: OXIDOREDUCTASE
Source organism: THERMUS THERMOPHILUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-01-04
Authors: Graczer, E., merlin, A., Singh, R.K., Manikandan, K., Zavodsky, P., Weiss, M.S., Vas, M.
PDB entry 2y42: Structure of Isopropylmalate dehydrogenase from Thermus thermophilus - complex with NADH and Mn
Classification: OXIDOREDUCTASE
Source organism: THERMUS THERMOPHILUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-01-04
Authors: Graczer, E., merlin, A., Singh, R.K., Manikandan, K., Zavodsky, P., Weiss, M.S., Vas, M.
PDB entry 2y43: Rad18 ubiquitin ligase RING domain structure
Classification: LIGASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-01-04
Authors: Hibbert, R.G., Sixma, T.K.
PDB entry 2y44: Crystal structure of GARP from Trypanosoma congolense
Classification: MEMBRANE PROTEIN
Source organism: TRYPANOSOMA CONGOLENSE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2011-01-04
Authors: Loveless, B.C., Mason, J.W., Sakurai, T., Inoue, N., Razavi, M., Pearson, T.W., Boulanger, M.J.
PDB entry 2y46: Structure of the mixed-function P450 MycG in complex with mycinamicin IV in C 2 2 21 space group
Classification: OXIDOREDUCTASE
Source organism: MICROMONOSPORA GRISEORUBIDA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2011-01-05
Authors: Li, S., Kells, P.M., Sherman, D.H., Podust, L.M.
PDB entry 2y48: Crystal structure of LSD1-CoREST in complex with a N-terminal SNAIL peptide
Classification: OXIDOREDUCTASE
Source organism: HOMO SAPIENS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2011-01-05
Authors: Baron, R., Binda, C., Tortorici, M., McCammon, J.A., Mattevi, A.
PDB entry 2y4a: Unexpected tricovalent binding mode of boronic acids within the active site of a penicillin binding protein
Classification: HYDROLASE
Source organism: ACTINOMADURA SP
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-01-05
Authors: Sauvage, E., Zervosen, A., Herman, R., Kerff, F., Rocaboy, M., Charlier, P.
PDB entry 2y4d: X-ray crystallographic structure of E. coli apo-EfeB
Classification: OXIDOREDUCTASE
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-01-05
Authors: Bamford, V.A., Andrews, S.C., Watson, K.A.
PDB entry 2y4e: X-ray crystallographic structure of E. coli ppix-EfeB
Classification: OXIDOREDUCTASE
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-01-05
Authors: Bamford, V.A., Andrews, S.C., Watson, K.A.
PDB entry 2y4f: X-ray crystallographic structure of E. coli heme-EfeB
Classification: OXIDOREDUCTASE
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-01-05
Authors: Bamford, V.A., Andrews, S.C., Watson, K.A.
PDB entry 2y4g: Structure of the Tirandamycin-bound FAD-dependent tirandamycin oxidase TamL in P212121 space group
Classification: OXIDOREDUCTASE
Source organism: STREPTOMYCES SP. 307-9
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2011-01-05
Authors: Carlson, J.C., Li, S., Gunatilleke, S.S., Anzai, Y., Burr, D.A., Podust, L.M., Sherman, D.H.
PDB entry 2y4i: KSR2-MEK1 heterodimer
Classification: TRANSFERASE
Source organism: HOMO SAPIENS; ORYCTOLAGUS CUNICULUS
Experimental method: X-RAY DIFFRACTION
Resolution: 3.46 Å
Deposited: 2011-01-06
Authors: Brennan, D.F., Barford, D.
PDB entry 2y4j: MANNOSYLGLYCERATE SYNTHASE IN COMPLEX WITH LACTATE
Classification: TRANSFERASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-01-07
Authors: Nielsen, M.M., Suits, M.D.L., Yang, M., Barry, C.S., Martinez-Fleites, C., Tailford, L.E., Flint, J.E., Davis, B.G., Davies, G.J., Gilbert, H.J.
PDB entry 2y4k: MANNOSYLGLYCERATE SYNTHASE IN COMPLEX WITH MG-GDP
Classification: TRANSFERASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2011-01-07
Authors: Nielsen, M.M., Suits, M.D.L., Yang, M., Barry, C.S., Martinez-Fleites, C., Tailford, L.E., Flint, J.E., Davis, B.G., Davies, G.J., Gilbert, H.J.
PDB entry 2y4l: MANNOSYLGLYCERATE SYNTHASE IN COMPLEX WITH Manganese and GDP
Classification: TRANSFERASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2011-01-07
Authors: Nielsen, M.M., Suits, M.D.L., Yang, M., Barry, C.S., Martinez-Fleites, C., Tailford, L.E., Flint, J.E., Davis, B.G., Davies, G.J., Gilbert, H.J.
PDB entry 2y4m: MANNOSYLGLYCERATE SYNTHASE IN COMPLEX WITH GDP-Mannose
Classification: TRANSFERASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-01-07
Authors: Nielsen, M.M., Suits, M.D.L., Yang, M., Barry, C.S., Martinez-Fleites, C., Tailford, L.E., Flint, J.E., Davis, B.G., Davies, G.J., Gilbert, H.J.
PDB entry 2y4n: PaaK1 in complex with phenylacetyl adenylate
Classification: LIGASE
Source organism: BURKHOLDERIA CENOCEPACIA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2011-01-07
Authors: Law, A., Boulanger, M.J.
PDB entry 2y4o: Crystal Structure of PaaK2 in complex with phenylacetyl adenylate
Classification: LIGASE
Source organism: BURKHOLDERIA CENOCEPACIA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-01-07
Authors: Law, A., Boulanger, M.J.
PDB entry 2y4p: Dimeric structure of DAPK-1 catalytic domain
Classification: TRANSFERASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2011-01-07
Authors: de Diego, I., Lehmann, F., Wilmanns, M.
PDB entry 2y4q: Solution structure of the EF-hand domain of Human Polycystin 2
Classification: TRANSPORT PROTEIN
Source organism: HOMO SAPIENS
Experimental method: SOLUTION NMR
Deposited: 2011-01-07
Authors: Allen, M.D., Qamar, S., Sandford, R.N.
PDB entry 2y4r: CRYSTAL STRUCTURE OF 4-AMINO-4-DEOXYCHORISMATE LYASE FROM PSEUDOMONAS AERUGINOSA
Classification: LYASE
Source organism: PSEUDOMONAS AERUGINOSA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2011-01-10
Authors: O'Rourke, P.E.F., Eadsforth, T.C., Fyfe, P.K., Shepard, S.M., Agacan, M., Hunter, W.N.
PDB entry 2y4s: BARLEY LIMIT DEXTRINASE IN COMPLEX WITH BETA-CYCLODEXTRIN
Classification: HYDROLASE
Source organism: HORDEUM VULGARE
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-01-10
Authors: Vester-Christensen, M.B., Hachem, M.A., Svensson, B., Henriksen, A.
PDB entry 2y4t: Crystal structure of the human co-chaperone P58(IPK)
Classification: CHAPERONE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2011-01-10
Authors: Svard, M., Biterova, E.I., Bourhis, J.-M., Guy, J.E.
PDB entry 2y4u: Crystal structure of human P58(IPK) in space group P312
Classification: CHAPERONE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2011-01-10
Authors: Svard, M., Biterova, E.I., Bourhis, J.-M., Guy, J.E.
PDB entry 2y4v: CRYSTAL STRUCTURE OF HUMAN CALMODULIN IN COMPLEX WITH A DAP KINASE-1 MUTANT (W305Y) PEPTIDE
Classification: METAL BINDING PROTEIN/TRANSFERASE
Source organism: HOMO SAPIENS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-01-11
Authors: de Diego, I., Lehmann, F., Wilmanns, M.
PDB entry 2y4w: Solution structure of human ubiquitin conjugating enzyme Rad6b
Classification: LIGASE
Source organism: HOMO SAPIENS
Experimental method: SOLUTION NMR
Deposited: 2011-01-11
Authors: Huang, A., Hibbert, R.G., deJong, R.N., Das, D., Sixma, T.K., Boelens, R.
PDB entry 2y4x: Structure of a domain from the type IV pilus biogenesis lipoprotein PilP, from Pseudomonas aeruginosa PA01
Classification: BIOSYNTHETIC PROTEIN
Source organism: PSEUDOMONAS AERUGINOSA PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-01-11
Authors: Derrick, J.P., Berry, J.
PDB entry 2y4y: Structure of a domain from the type IV pilus biogenesis lipoprotein PilP, from Pseudomonas aeruginosa
Classification: BIOSYNTHETIC PROTEIN
Source organism: PSEUDOMONAS AERUGINOSA PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-01-11
Authors: Derrick, J.P., Berry, J.
PDB entry 2y4z: Structure of the amino-terminal capsid restriction escape mutation N- MLV L10W
Classification: VIRAL PROTEIN
Source organism: MURINE LEUKEMIA VIRUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.001 Å
Deposited: 2011-01-11
Authors: Goldstone, D.C., Holden-Dye, K., Ohkura, S., Stoye, J.P., Taylor, I.A.
PDB entry 2y50: Crystal Structure of Collagenase G from Clostridium histolyticum at 2. 80 Angstrom Resolution
Classification: HYDROLASE
Source organism: CLOSTRIDIUM HISTOLYTICUM
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2011-01-11
Authors: Eckhard, U., Brandstetter, H.
PDB entry 2y51: Crystal structure of E167A mutant of the box pathway encoded ALDH from Burkholderia xenovorans LB400
Classification: OXIDOREDUCTASE
Source organism: BURKHOLDERIA XENOVORANS LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2011-01-11
Authors: Bains, J., Leon, R., Temke, K.G., Boulanger, M.J.
PDB entry 2y52: Crystal structure of E496A mutant of the box pathway encoded ALDH from Burkholderia xenovorans LB400
Classification: OXIDOREDUCTASE
Source organism: BURKHOLDERIA XENOVORANS LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2011-01-11
Authors: Bains, J., Leon, R., Temke, K.G., Boulanger, M.J.
PDB entry 2y53: Crystal structure of E257Q mutant of the box pathway encoded ALDH from Burkholderia xenovorans LB400
Classification: OXIDOREDUCTASE
Source organism: BURKHOLDERIA XENOVORANS LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2011-01-11
Authors: Bains, J., Leon, R., Temke, K.G., Boulanger, M.J.
PDB entry 2y54: Fragment growing induces conformational changes in acetylcholine- binding protein: A structural and thermodynamic analysis - (Fragment 1)
Classification: RECEPTOR
Source organism: APLYSIA CALIFORNICA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.65 Å
Deposited: 2011-01-12
Authors: Rucktooa, P., Edink, E., deEsch, I.J.P., Sixma, T.K.
PDB entry 2y55: Unexpected tricovalent binding mode of boronic acids within the active site of a penicillin binding protein
Classification: HYDROLASE
Source organism: ACTINOMADURA SP. R39
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-01-12
Authors: Sauvage, E., Zervosen, A., Herman, R., Kerff, F., Rocaboy, M., Charlier, P.
PDB entry 2y56: Fragment growing induces conformational changes in acetylcholine- binding protein: A structural and thermodynamic analysis - (Compound 3)
Classification: RECEPTOR
Source organism: APLYSIA CALIFORNICA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.59 Å
Deposited: 2011-01-12
Authors: Rucktooa, P., Edink, E., deEsch, I.J.P., Sixma, T.K.
PDB entry 2y57: Fragment growing induces conformational changes in acetylcholine- binding protein: A structural and thermodynamic analysis - (Compound 4)
Classification: RECEPTOR
Source organism: APLYSIA CALIFORNICA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2011-01-12
Authors: Rucktooa, P., Edink, E., deEsch, I.J.P., Sixma, T.K.
PDB entry 2y58: Fragment growing induces conformational changes in acetylcholine- binding protein: A structural and thermodynamic analysis - (Compound 6)
Classification: RECEPTOR
Source organism: APLYSIA CALIFORNICA
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2011-01-12
Authors: Rucktooa, P., Edink, E., deEsch, I.J.P., Sixma, T.K.
PDB entry 2y59: Unexpected tricovalent binding mode of boronic acids within the active site of a penicillin binding protein
Classification: HYDROLASE
Source organism: ACTINOMADURA SP. R39
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-01-12
Authors: Sauvage, E., Zervosen, A., Herman, R., Kerff, F., Rocaboy, M., Charlier, P.
PDB entry 2y5a: Cytochrome c peroxidase (CCP) W191G bound to 3-aminopyridine
Classification: OXIDOREDUCTASE
Source organism: SACCHAROMYCES CEREVISIAE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2011-01-12
Authors: Cappel, D., Wahlstrom, R., Brenk, R., Sotriffer, C.A.
PDB entry 2y5b: Structure of USP21 in complex with linear diubiquitin-aldehyde
Classification: PROTEIN BINDING/HYDROLASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-01-12
Authors: Ye, Y., Akutsu, M., Reyes-Turcu, F., Enchev, R.I., Wilkinson, K.D., Komander, D.
PDB entry 2y5c: Structure of human ferredoxin 2 (Fdx2)in complex with 2Fe2S cluster
Classification: ELECTRON TRANSPORT
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-01-12
Authors: Webert, H., Hobler, A., Sheftel, A.D., Molik, S., Maestre-Reyna, M., Essen, L.-O., Vorniscescu, D., Keusgen, M., Hannemann, F., Bernhardt, R., Lill, R.
PDB entry 2y5d: Crystal structure of C296A mutant of the box pathway encoded ALDH from Burkholderia xenovorans LB400
Classification: OXIDOREDUCTASE
Source organism: BURKHOLDERIA XENOVORANS LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2011-01-12
Authors: Bains, J., Leon, R., Temke, K.G., Boulanger, M.J.
PDB entry 2y5e: BARLEY LIMIT DEXTRINASE IN COMPLEX WITH ALPHA-CYCLODEXTRIN
Classification: HYDROLASE
Source organism: HORDEUM VULGARE
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2011-01-13
Authors: Vester-Christensen, M.B., Hachem, M.A., Svensson, B., Henriksen, A.
PDB entry 2y5f: FACTOR XA - CATION INHIBITOR COMPLEX
Classification: BLOOD CLOTTING
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2011-01-13
Authors: Banner, D.W., Salonen, L.M., Holland, M.C., Haap, W., Benz, J., Diederich, F.
PDB entry 2y5g: FACTOR XA - CATION INHIBITOR COMPLEX
Classification: BLOOD CLOTTING
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.29 Å
Deposited: 2011-01-13
Authors: Banner, D.W., Salonen, L.M., Holland, M.C., Haap, W., Benz, J., Diederich, F.
PDB entry 2y5h: FACTOR XA - CATION INHIBITOR COMPLEX
Classification: BLOOD CLOTTING
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.33 Å
Deposited: 2011-01-13
Authors: Banner, D.W., Salonen, L.M., Holland, M.C., Haap, W., Benz, J., Diederich, F.
PDB entry 2y5i: S100Z from zebrafish in complex with calcium
Classification: METAL BINDING PROTEIN
Source organism: DANIO RERIO
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2011-01-13
Authors: Moroz, O.V., Bronstein, I.B., Wilson, K.S.
PDB entry 2y5j: Crystal structure of Burkholderia cenocepacia dihydropteroate synthase.
Classification: TRANSFERASE
Source organism: BURKHOLDERIA CENOCEPACIA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2011-01-13
Authors: Morgan, R.E., Batot, G.O., Dement, J.M., Rao, V.A., Eadsforth, T.C., Hunter, W.N.
PDB entry 2y5k: Orally active aminopyridines as inhibitors of tetrameric fructose 1,6- bisphosphatase
Classification: HYDROLASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-01-14
Authors: Ruf, A., Hebeisen, P., Haap, W., Kuhn, B., Mohr, P., Wessel, H.P., Zutter, U., Kirchner, S., Benz, J., Joseph, C., Alvarez-Sanchez, R., Gubler, M., Schott, B., Benardeau, A., Tozzo, E., Kitas, E.
PDB entry 2y5l: orally active aminopyridines as inhibitors of tetrameric fructose 1,6- bisphosphatase
Classification: HYDROLASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-01-14
Authors: ruf, a., hebeisen, p., haap, w., kuhn, b., mohr, p., wessel, h.p., zutter, u., kirchner, s., benz, j., joseph, c., alvarez-sanchez, r., gubler, m., schott, b., benardeau, a., tozzo, e., kitas, e.
PDB entry 2y5m: STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 7.7 MONOACYLGLYCEROL LIPID CUBIC PHASE.
Classification: ANTIBIOTIC
Source organism: BREVIBACILLUS BREVIS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2011-01-14
Authors: Hoefer, N., Aragao, D., Caffrey, M.
PDB entry 2y5n: Structure of the mixed-function P450 MycG in complex with mycinamicin V in P21 space group
Classification: OXIDOREDUCTASE
Source organism: MICROMONOSPORA GRISEORUBIDA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2011-01-15
Authors: Li, S., Kells, P.M., Sherman, D.H., Podust, L.M.
PDB entry 2y5p: B-repeat of Listeria monocytogenes InlB (internalin B)
Classification: PROTEIN BINDING
Source organism: LISTERIA MONOCYTOGENES EGD
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2011-01-17
Authors: Ebbes, M., Niemann, H.H.
PDB entry 2y5q: Listeria monocytogenes InlB (internalin B) residues 36-392
Classification: PROTEIN BINDING
Source organism: LISTERIA MONOCYTOGENES
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2011-01-17
Authors: Ebbes, M., Niemann, H.H.
PDB entry 2y5s: Crystal structure of Burkholderia cenocepacia dihydropteroate synthase complexed with 7,8-dihydropteroate.
Classification: TRANSFERASE
Source organism: BURKHOLDERIA CENOCEPACIA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2011-01-17
Authors: Morgan, R.E., Batot, G.O., Dement, J.M., Rao, V.A., Eadsforth, T.C., Hunter, W.N.
PDB entry 2y5t: Crystal structure of the pathogenic autoantibody CIIC1 in complex with the triple-helical C1 peptide
Classification: IMMUNE SYSTEM
Source organism: MUS MUSCULUS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-01-17
Authors: Dobritzsch, D., Lindh, I., Schneider, N., Uysal, H., Nandakumar, K.S., Burkhardt, H., Schneider, G., Holmdahl, R.
PDB entry 2y5w: Crystal structure of Drosophila melanogaster kinesin-1 motor domain dimer
Classification: MOTOR PROTEIN
Source organism: DROSOPHILA MELANOGASTER
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2011-01-18
Authors: Kaan, H.Y.K., Hackney, D.D., Kozielski, F.
PDB entry 2y5y: Crystal structure of LacY in complex with an affinity inactivator
Classification: TRANSPORT PROTEIN
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 3.38 Å
Deposited: 2011-01-19
Authors: Chaptal, V., Kwon, S., Sawaya, M.R., Guan, L., Kaback, H.R., Abramson, J.
PDB entry 2y5z: Mixed-function P450 MycG in complex with mycinamicin III in C2221 space group
Classification: OXIDOREDUCTASE
Source organism: MICROMONOSPORA GRISEORUBIDA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2011-01-19
Authors: Li, S., Kells, P.M., Sherman, D.H., Podust, L.M.
PDB entry 2y60: Isopenicillin N synthase with AC-D-methionine
Classification: OXIDOREDUCTASE
Source organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2011-01-19
Authors: Rutledge, P.J., Clifton, I.J., Ge, W.
PDB entry 2y61: Crystal structure of Leishmanial E65Q-TIM complexed with S-Glycidol phosphate
Classification: ISOMERASE
Source organism: LEISHMANIA MEXICANA
Experimental method: X-RAY DIFFRACTION
Resolution: 0.99 Å
Deposited: 2011-01-19
Authors: Venkatesan, R., Alahuhta, M., Pihko, P.M., Wierenga, R.K.
PDB entry 2y62: Crystal structure of Leishmanial E65Q-TIM complexed with R-Glycidol phosphate
Classification: ISOMERASE
Source organism: LEISHMANIA MEXICANA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2011-01-19
Authors: Venkatesan, R., Alahuhta, M., Pihko, P.M., Wierenga, R.K.
PDB entry 2y63: Crystal structure of Leishmanial E65Q-TIM complexed with Bromohydroxyacetone phosphate
Classification: ISOMERASE
Source organism: LEISHMANIA MEXICANA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2011-01-19
Authors: Venkatesan, R., Alahuhta, M., Pihko, P.M., Wierenga, R.K.
PDB entry 2y64: Xylopentaose binding mutated (X-2 L110F) CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Classification: HYDROLASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2011-01-19
Authors: von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.
PDB entry 2y65: Crystal structure of Drosophila melanogaster kinesin-1 motor domain dimer-tail complex
Classification: MOTOR PROTEIN
Source organism: DROSOPHILA MELANOGASTER
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-01-19
Authors: Kaan, H.Y.K., Hackney, D.D., Kozielski, F.
PDB entry 2y66: New 5-Benzylidenethiazolidine-4-one Inhibitors of Bacterial MurD Ligase: Design, Synthesis, Crystal Structures, and Biological Evaluation
Classification: LIGASE
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2011-01-20
Authors: Zidar, N., Tomasic, T., Sink, R., Kovac, A., Patin, D., Blanot, D., Contreras-Martel, C., Dessen, A., Muller-Premru, M., Zega, A., Gobec, S., Peterlin-Masic, L., Kikelj, D.
PDB entry 2y67: New 5-Benzylidenethiazolidine-4-one Inhibitors of Bacterial MurD Ligase: Design, Synthesis, Crystal Structures, and Biological Evaluation
Classification: LIGASE
Source organism: ESCHERICHIA COLI
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2011-01-20
Authors: Zidar, N., Tomasic, T., Sink, R., Kovac, A., Patin, D., Blanot, D., Contreras-Martel, C., Dessen, A., Muller-Premru, M., Zega, A., Gobec, S., Peterlin-Masic, L., Kikelj, D.
PDB entry 2y68: Structure-based design of a new series of D-glutamic acid-based inhibitors of bacterial MurD ligase
Classification: LIGASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2011-01-20
Authors: Tomasic, T., Zidar, N., Sink, R., Kovac, A., Patin, D., Blanot, D., Contreras-Martel, C., Dessen, A., Muller-Premru, M., Zega, A., Gobec, S., Peterlin-Masic, L., Kikelj, D.
PDB entry 2y69: Bovine heart cytochrome c oxidase re-refined with molecular oxygen
Classification: ELECTRON TRANSPORT
Source organism: BOS TAURUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2011-01-20
Authors: Kaila, V.R.I., Oksanen, E., Goldman, A., Verkhovsky, M.I., Sundholm, D., Wikstrom, M.
PDB entry 2y6a: Ascorbate Peroxidase R38A mutant
Classification: OXIDOREDUCTASE
Source organism: GLYCINE MAX
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-01-20
Authors: Metcalfe, C.L., Efimov, I., Gumiero, A., Raven, E.L., Moody, P.C.E.
PDB entry 2y6b: Ascorbate Peroxidase R38K mutant
Classification: OXIDOREDUCTASE
Source organism: GLYCINE MAX
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-01-20
Authors: Metcalfe, C.L., Efimov, I., Gumiero, A., Raven, E.L., Moody, P.C.E.
PDB entry 2y6c: The Discovery of MMP7 inhibitors Exploiting a Novel Selectivity Trigger
Classification: HYDROLASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-01-20
Authors: Edman, K., Furber, M., Hemsley, P., Johansson, C., Pairaudeau, G., Petersen, J., Stocks, M., Tervo, A., Ward, A., Wells, E., Wissler, L.
PDB entry 2y6d: The Discovery of MMP7 Inhibitors Exploiting a Novel Selectivity Trigger
Classification: HYDROLASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2011-01-20
Authors: Edman, K., Furber, M., Hemsley, P., Johansson, C., Pairaudeau, G., Petersen, J., Stocks, M., Tervo, A., Ward, A., Wells, E., Wissler, L.
PDB entry 2y6e: Structure of the D1D2 domain of USP4, the conserved catalytic domain
Classification: HYDROLASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2011-01-20
Authors: Luna-Vargas, M.P.A., Faesen, A.C., van Dijk, W.J., Rape, M., Fish, A., Sixma, T.K.
PDB entry 2y6f: Isopenicillin N synthase with AC-D-S-methyl-3R-methylcysteine
Classification: OXIDOREDUCTASE
Source organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2011-01-21
Authors: Rutledge, P.J., Clifton, I.J., Ge, W.
PDB entry 2y6g: Cellopentaose binding mutated (X-2 L110F) CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Classification: HYDROLASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2011-01-21
Authors: von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.
PDB entry 2y6h: X-2 L110F CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Classification: HYDROLASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2011-01-21
Authors: von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.
PDB entry 2y6i: Crystal Structure of Collagenase G from Clostridium histolyticum in complex with Isoamylphosphonyl-Gly-Pro-Ala at 3.25 Angstrom Resolution
Classification: HYDROLASE/INHIBITOR
Source organism: CLOSTRIDIUM HISTOLYTICUM; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2011-01-21
Authors: Eckhard, U., Brandstetter, H.
PDB entry 2y6j: X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Classification: HYDROLASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-01-24
Authors: von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.
PDB entry 2y6k: Xylotetraose bound to X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Classification: HYDROLASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.36 Å
Deposited: 2011-01-24
Authors: von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.
PDB entry 2y6l: Xylopentaose binding X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase
Classification: HYDROLASE
Source organism: RHODOTHERMUS MARINUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2011-01-24
Authors: von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.
PDB entry 2y6m: Crystal structure of EphA4 kinase domain
Classification: TRANSFERASE
Source organism: MUS MUSCULUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2011-01-25
Authors: Farenc, C.J.A., Celie, P.H.N., Siegal, G.
PDB entry 2y6n: STRUCTURE OF LINEAR GRAMICIDIN D OBTAINED USING TYPE I CRYSTALS GROWN IN A 8.8 MONOACYLGLYCEROL LIPID CUBIC PHASE.
Classification: ANTIBIOTIC
Source organism: BREVIBACILLUS BREVIS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.26 Å
Deposited: 2011-01-25
Authors: Hoefer, N., Aragao, D., Caffrey, M.
PDB entry 2y6o: Crystal structure of EphA4 kinase domain in complex with Dasatinib.
Classification: TRANSFERASE
Source organism: MUS MUSCULUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.543 Å
Deposited: 2011-01-25
Authors: Farenc, C.J.A., Celie, P.H.N., Siegal, G.
PDB entry 2y6p: Evidence for a Two-Metal-Ion-Mechanism in the Kdo- Cytidylyltransferase KdsB
Classification: TRANSFERASE
Source organism: AQUIFEX AEOLICUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2011-01-25
Authors: Schmidt, H., Mesters, J.R., Mamat, U., Hilgenfeld, R.
PDB entry 2y6q: Structure of the TetX monooxygenase in complex with the substrate 7- Iodtetracycline
Classification: OXIDOREDUCTASE
Source organism: BACTEROIDES THETAIOTAOMICRON
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2011-01-25
Authors: Volkers, G., Palm, G.J., Weiss, M.S., Wright, G.D., Hinrichs, W.
PDB entry 2y6r: Structure of the TetX monooxygenase in complex with the substrate 7- chlortetracycline
Classification: OXIDOREDUCTASE
Source organism: BACTEROIDES THETAIOTAOMICRON
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2011-01-25
Authors: Volkers, G., Palm, G.J., Weiss, M.S., Wright, G.D., Hinrichs, W.
PDB entry 2y6s: Structure of an Ebolavirus-protective antibody in complex with its mucin-domain linear epitope
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: MUS MUSCULUS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2011-01-25
Authors: Olal, D.O., Kuehne, A., Lee, J.E., Bale, S., Dye, J.M., Saphire, E.O.
PDB entry 2y6t: Molecular Recognition of Chymotrypsin by the Serine Protease Inhibitor Ecotin from Yersinia pestis
Classification: HYDROLASE/INHIBITOR
Source organism: BOS TAURUS; YERSINIA PSEUDOTUBERCULOSIS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2011-01-26
Authors: Clark, E.A., Walker, N., Ford, D.C., Cooper, I.A., Oyston, P.C.F., Acharya, K.R.
PDB entry 2y6u: Peroxisomal alpha-beta-hydrolase Lpx1 (Yor084w) from Saccharomyces cerevisiae (crystal form II)
Classification: HYDROLASE
Source organism: SACCHAROMYCES CEREVISIAE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-01-26
Authors: Thoms, S., Niemann, H.H.
PDB entry 2y6v: Peroxisomal alpha-beta-hydrolase Lpx1 (Yor084w) from Saccharomyces cerevisiae (crystal form I)
Classification: HYDROLASE
Source organism: SACCHAROMYCES CEREVISIAE
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2011-01-26
Authors: Thoms, S., Niemann, H.H.
PDB entry 2y6w: Structure of a Bcl-w dimer
Classification: APOPTOSIS
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-01-27
Authors: Lee, E.F., Evangelista, M., Pettikiriarachchi, A., Dogovski, C., Perugini, M.A., Colman, P.M., Fairlie, W.D.
PDB entry 2y6x: Structure of Psb27 from Thermosynechococcus elongatus
Classification: PHOTOSYNTHESIS
Source organism: THERMOSYNECHOCOCCUS ELONGATUS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2011-01-27
Authors: Michoux, F., Takasaka, K., Boehm, M., Nixon, P.J., Murray, J.W.
PDB entry 2y6y: Crystal structure of TtrD from Archaeoglobus fulgidus
Classification: CHAPERONE
Source organism: ARCHAEOGLOBUS FULGIDUS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2011-01-27
Authors: Dawson, A., Coulthurst, S.J., Sargent, F., Hunter, W.N.
PDB entry 2y6z: Crystallographic structure of GM23 an example of Catalytic migration from TIM to thiamin phosphate synthase.
Classification: ISOMERASE
Source organism: TRYPANOSOMA BRUCEI BRUCEI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-01-27
Authors: Saab-Rincon, G., Olvera, L., Olvera, M., Rudino-Pinera, E., Soberon, X., Morett, E.
PDB entry 2y70: CRYSTALLOGRAPHIC STRUCTURE OF GM23, MUTANT G89D, AN EXAMPLE OF CATALYTIC MIGRATION FROM TIM TO THIAMIN PHOSPHATE SYNTHASE.
Classification: ISOMERASE
Source organism: TRYPANOSOMA BRUCEI BRUCEI
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2011-01-27
Authors: Saab-Rincon, G., Olvera, L., Olvera, M., Rudino-Pinera, E., Soberon, X., Morett, E.
PDB entry 2y71: Structure of Mycobacterium tuberculosis type II dehydroquinase complexed with (1R,4S,5R)-1,4,5-trihydroxy-3-((5-methylbenzo(b) thiophen-2-yl)methoxy)cyclohex-2-enecarboxylate
Classification: LYASE
Source organism: MYCOBACTERIUM TUBERCULOSIS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2011-01-28
Authors: Otero, J.M., Llamas-Saiz, A.L., Fox, G.C., Tizon, L., Prazeres, V.F.V., Lamb, H., Hawkins, A.R., Ainsa, J.A., Castedo, L., Gonzalez-Bello, C., van Raaij, M.J.
PDB entry 2y72: Crystal structure of the PKD Domain of Collagenase G from Clostridium Histolyticum at 1.18 Angstrom Resolution.
Classification: HYDROLASE
Source organism: CLOSTRIDIUM HISTOLYTICUM
Experimental method: X-RAY DIFFRACTION
Resolution: 1.18 Å
Deposited: 2011-01-27
Authors: Eckhard, U., Brandstetter, H.
PDB entry 2y73: THE NATIVE STRUCTURES OF SOLUBLE HUMAN PRIMARY AMINE OXIDASE AOC3
Classification: OXIDOREDUCTASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2011-01-28
Authors: Elovaara, H., Kidron, H., Parkash, V., Nymalm, Y., Bligt, E., Ollikka, P., Smith, D.J., Pihlavisto, M., Salmi, M., Jalkanen, S., Salminen, T.A.
PDB entry 2y74: THE CRYSTAL STRUCTURE OF HUMAN SOLUBLE PRIMARY AMINE OXIDASE AOC3 IN THE OFF-COPPER CONFORMATION
Classification: OXIDOREDUCTASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2011-01-28
Authors: Elovaara, H., Kidron, H., Parkash, V., Nymalm, Y., Bligt, E., Ollikka, P., Smith, D.J., Pihlavisto, M., Salmi, M., Jalkanen, S., Salminen, T.A.
PDB entry 2y75: The Structure of CymR (YrzC) the Global Cysteine Regulator of B. subtilis
Classification: TRANSCRIPTION
Source organism: BACILLUS SUBTILIS
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-01-28
Authors: Shepard, W., Soutourina, O., Courtois, E., England, P., Haouz, A., Martin-Verstraete, I.
PDB entry 2y76: Structure of Mycobacterium tuberculosis type II dehydroquinase complexed with (1R,4S,5R)-3-(benzo(b)thiophen-5-ylmethoxy)-2-(benzo(b) thiophen-5-ylmethyl)-1,4,5-trihydroxycyclohex-2-enecarboxylate
Classification: LYASE
Source organism: MYCOBACTERIUM TUBERCULOSIS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-01-28
Authors: Otero, J.M., Llamas-Saiz, A.L., Fox, G.C., Tizon, L., Prazeres, V.F.V., Lamb, H., Hawkins, A.R., Ainsa, J.A., Castedo, L., Gonzalez-Bello, C., van Raaij, M.J.
PDB entry 2y77: Structure of Mycobacterium tuberculosis type II dehydroquinase complexed with (1R,4S,5R)-3-(benzo(b)thiophen-2-ylmethoxy)-1,4,5- trihydroxy-2-(thiophen-2-ylmethyl)cyclohex-2-enecarboxylate
Classification: LYASE
Source organism: MYCOBACTERIUM TUBERCULOSIS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2011-01-28
Authors: Otero, J.M., Llamas-Saiz, A.L., Fox, G.C., Tizon, L., Prazeres, V.F.V., Lamb, H., Hawkins, A.R., Ainsa, J.A., Castedo, L., Gonzalez-Bello, C., van Raaij, M.J.
PDB entry 2y78: Crystal structure of BPSS1823, a Mip-like chaperone from Burkholderia pseudomallei
Classification: ISOMERASE
Source organism: BURKHOLDERIA PSEUDOMALLEI
Experimental method: X-RAY DIFFRACTION
Resolution: 0.91 Å
Deposited: 2011-01-28
Authors: Norville, I.H., O'Shea, K., Sarkar-Tyson, M., Harmer, N.J.
PDB entry 2y79: STRUCTURE OF THE FIRST GAF DOMAIN E87A MUTANT OF MYCOBACTERIUM TUBERCULOSIS DOSS
Classification: TRANSFERASE
Source organism: MYCOBACTERIUM TUBERCULOSIS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2011-01-30
Authors: Cho, H.Y., Cho, H.J., Kang, B.S.
PDB entry 2y7a: Crystal structure of unliganded GTB P156L
Classification: TRANSFERASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2011-01-31
Authors: Weadge, J., Palcic, M.M., Henriksen, A.
PDB entry 2y7b: Crystal structure of the PH domain of human Actin-binding protein anillin ANLN
Classification: CELL CYCLE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-01-31
Authors: Vollmar, M., Wang, J., Krojer, T., Elkins, J., Filippakopoulos, P., Ugochukwu, E., Cocking, R., von Delft, F., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A., Knapp, S.
PDB entry 2y7c: Atomic model of the Ocr-bound methylase complex from the Type I restriction-modification enzyme EcoKI (M2S1). Based on fitting into EM map 1534.
Classification: TRANSFERASE
Source organism: ENTEROBACTERIA PHAGE T7; ESCHERICHIA COLI
Experimental method: ELECTRON MICROSCOPY
Resolution: 18 Å
Deposited: 2011-01-31
Authors: Kennaway, C.K., Obarska-Kosinska, A., White, J.H., Tuszynska, I., Cooper, L.P., Bujnicki, J.M., Trinick, J., Dryden, D.T.F.
PDB entry 2y7d: Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (Kce) from Candidatus Cloacamonas acidaminovorans (orthorombic form)
Classification: LYASE
Source organism: CANDIDATUS CLOACAMONAS ACIDAMINOVORANS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.59 Å
Deposited: 2011-01-31
Authors: Bellinzoni, M., Alzari, P.M.
PDB entry 2y7e: Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (Kce) from Candidatus Cloacamonas acidaminovorans (tetragonal form)
Classification: LYASE
Source organism: CANDIDATUS CLOACAMONAS ACIDAMINOVORANS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.28 Å
Deposited: 2011-01-31
Authors: Bellinzoni, M., Alzari, P.M.
PDB entry 2y7f: Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (Kce) from C. Cloacamonas acidaminovorans in complex with the substrate 3- keto-5-aminohexanoate
Classification: LYASE
Source organism: CANDIDATUS CLOACAMONAS ACIDAMINOVORANS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2011-01-31
Authors: Bellinzoni, M., Alzari, P.M.
PDB entry 2y7g: Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (Kce) from C. Cloacamonas acidaminovorans in complex with the product acetoacetate
Classification: LYASE
Source organism: CANDIDATUS CLOACAMONAS ACIDAMINOVORANS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2011-01-31
Authors: Bellinzoni, M., Alzari, P.M.
PDB entry 2y7h: Atomic model of the DNA-bound methylase complex from the Type I restriction-modification enzyme EcoKI (M2S1). Based on fitting into EM map 1534.
Classification: TRANSFERASE/DNA
Source organism: ESCHERICHIA COLI; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 18 Å
Deposited: 2011-01-31
Authors: Kennaway, C.K., Obarska-Kosinska, A., White, J.H., Tuszynska, I., Cooper, L.P., Bujnicki, J.M., Trinick, J., Dryden, D.T.F.
PDB entry 2y7i: Structural basis for high arginine specificity in Salmonella typhimurium periplasmic binding protein STM4351.
Classification: ARGININE-BINDING PROTEIN
Source organism: SALMONELLA ENTERICA SUBSP. ENTERICA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2011-01-31
Authors: Stamp, A.L., Owen, P., El Omari, K., Lockyer, M., Lamb, H.K., Charles, I.G., Hawkins, A.R., Stammers, D.K.
PDB entry 2y7j: Structure of human phosphorylase kinase, gamma 2
Classification: TRANSFERASE
Source organism: HOMO SAPIENS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2011-01-31
Authors: Muniz, J.R.C., Shrestha, A., Savitsky, P., Wang, J., Rellos, P., Fedorov, O., Burgess-Brown, N., Brenner, B., Berridge, G., Elkins, J.M., Krojer, T., Vollmar, M., Che, K.H., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Bountra, C., Knapp, S.
PDB entry 2y7k: DntR Inducer Binding Domain in Complex with Salicylate. Monoclinic crystal form
Classification: TRANSCRIPTION
Source organism: BURKHOLDERIA SP. DNT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2011-01-31
Authors: Devesse, L., Smirnova, I., Lonneborg, R., Kapp, U., Brzezinski, P., Leonard, G.A., Dian, C.
PDB entry 2y7l: Structure of N-terminal domain of Candida albicans Als9-2 in complex with human fibrinogen gamma peptide
Classification: CELL ADHESION
Source organism: CANDIDA ALBICANS; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.49 Å
Deposited: 2011-01-31
Authors: Salgado, P.S., Cota, E.
PDB entry 2y7m: Structure of N-terminal domain of Candida albicans als9-2 (Pt derivative)
Classification: CELL ADHESION
Source organism: CANDIDA ALBICANS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2011-01-31
Authors: Salgado, P.S., Cota, E.
PDB entry 2y7n: Structure of N-terminal domain of Candida albicans als9-2 - Apo Form
Classification: CELL ADHESION
Source organism: CANDIDA ALBICANS
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2011-01-31
Authors: Salgado, P.S., Cota, E.
PDB entry 2y7o: Structure of N-terminal domain of Candida albicans als9-2 - G299W mutant
Classification: CELL ADHESION
Source organism: CANDIDA ALBICANS
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2011-01-31
Authors: Salgado, P.S., Burchell, L., Cota, E.
PDB entry 2y7p: DntR Inducer Binding Domain in Complex with Salicylate. Trigonal crystal form
Classification: TRANSCRIPTION REGULATOR
Source organism: BURKHOLDERIA SP.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2011-02-01
Authors: Devesse, L., Smirnova, I., Lonneborg, R., Kapp, U., Brzezinski, P., Leonard, G.A., Dian, C.