LiteFold/PDB huggingface dataset:
PDB entry 9j2k: Crystal structure of Omega Transaminase TA_2799 from Pseudomonas putida KT2440
Classification: TRANSFERASE
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2024-08-07
Authors: Das, P., Bhaumik, P.
PDB entry 9j2l: 4,5-DOPA-extradiol-dioxygenase from Mirabilis jalapa
Classification: OXIDOREDUCTASE
Source organism: Mirabilis jalapa
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2024-08-07
Authors: Chou, Y.C., Hsu, C.H.
PDB entry 9j2m: Fe2+/pterin-dependent enzyme,BH4-SnPolE complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. NTH33
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2024-08-07
Authors: Zhang, Z.Y., Chen, W.Q., Wang, B.J., Qu, Y., Gong, R., Liu, J.
PDB entry 9j2n: Cryo-EM structure of the human glucose transporter, GLUT7 in outward-facing open conformation
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-07
Authors: Lee, S.S., Kim, S., Jin, M.S.
PDB entry 9j2p: Fe2+/pterin-dependent,BH4-L-isoleucine-SnPolE complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. NTH33
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-08-07
Authors: Zhang, Z.Y., Chen, W.Q., Wang, B.J., Qu, Y., Gong, R., Liu, J.
PDB entry 9j2r: Fe2+/pterin-dependent,SnPolE-L-ile complex,Y157A mutation
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. NTH33
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2024-08-07
Authors: Zhang, Z.Y., Chen, W.Q., Wang, B.J., Gong, R., Qu, Y., Liu, J.
PDB entry 9j2w: Human cGAS catalytic domain bound with XL-3156
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-08-07
Authors: Zhao, W.F., Li, M.J., Xu, Y.C.
PDB entry 9j2x: Human cGAS catalytic domain bound with RU.521
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2024-08-07
Authors: Zhao, W.F., Li, M.J., Xu, Y.C.
PDB entry 9j2y: Human cGAS catalytic domain bound with G150
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2024-08-07
Authors: Zhao, W.F., Li, M.J., Xu, Y.C.
PDB entry 9j2z: mouse cGAS catalytic domain bound with RU.521
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2024-08-07
Authors: Zhao, W.F., Li, M.J., Xu, Y.C.
PDB entry 9j30: Fe2+/pterin-dependent,SnPolE-Y280A
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. NTH33
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-08-07
Authors: Zhang, Z.Y., Chen, W.Q., Wang, B.J., Qu, Y., Gong, R., Liu, J.
PDB entry 9j31: cryo-EM structure of zebrafish GPR4-Gs complex at pH 8.5
Classification: SIGNALING PROTEIN/IMMUNE SYSTEM
Source organism: Danio rerio; Escherichia coli; Homo sapiens; Mus musculus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.05 Å
Deposited: 2024-08-07
Authors: Ma, Y.T., Tang, M.Y., Song, G.J., Ru, H.
PDB entry 9j32: Crystal structure of aminotransferase-like protein from Variovorax paradoxus mutant N174K
Classification: TRANSFERASE
Source organism: Variovorax paradoxus B4
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2024-08-07
Authors: Ilyasov, I.O., Minyaev, M.E., Rakitina, T.V., Bakunova, A.K., Matyuta, I.O., Popov, V.O., Bezsudnova, E.Y., Boyko, K.M.
PDB entry 9j33: Fe2+/pterin-dependent,SnPolE-F140A
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. NTH33
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-08-07
Authors: Zhang, Z.Y., Chen, W.Q., Wang, B.J., Qu, Y., Gong, R., Liu, J.
PDB entry 9j34: Cryo-EM structure of Arabidopsis CNGC1
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.51 Å
Deposited: 2024-08-07
Authors: Wang, J.P., Zhang, P., Zhang, X.
PDB entry 9j35: Cryo-EM structure of Arabidopsis CNGC5 in nanodisc
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.71 Å
Deposited: 2024-08-07
Authors: Wang, J.P., Zhang, X., Zhang, P.
PDB entry 9j36: Cryo-EM structure of Arabidopsis CNGC5
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å
Deposited: 2024-08-07
Authors: Wang, J.P., Zhang, P., Zhang, X.
PDB entry 9j37: Cryo-EM structure of human Alpha-7 nicotinic acetylcholine receptor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-08
Authors: Yu, R., Zhao, Y.
PDB entry 9j38: human KCNQ5-CaM in apo state
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-08-08
Authors: Yang, Z., Guo, J.
PDB entry 9j3c: Cryo-EM structure of NAT10 with Co-enzyme A
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-08-08
Authors: Jiang, Y., Xia, J.
PDB entry 9j3d: Cryo-EM structure of TMexCD1-TOprJ1
Classification: TRANSPORT PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-08-08
Authors: Shi, Y., Feng, Y.
PDB entry 9j3e: Cryo-EM structure of TMexCD1-TOprJ1 in complex with 1-(1-naphthylmethyl)piperazine
Classification: TRANSPORT PROTEIN
Source organism: Klebsiella pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-08-08
Authors: Shi, Y., Feng, Y.
PDB entry 9j3f: The structure of phospholipase TleB
Classification: TOXIN
Source organism: Xanthomonas oryzae pv. oryzae PXO99A
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-08
Authors: Tan, Z.
PDB entry 9j3g: Fe2+/pterin-dependent, apo SmPolE
Classification: OXIDOREDUCTASE
Source organism: Streptomyces sp. ms191
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2024-08-08
Authors: Zhang, Z.Y., Chen, W.Q., Wang, B.J., Qu, Y., Gong, R., Liu, J.
PDB entry 9j3j: Arabidopsis ATP/ADP translocator AtNTT1
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.83 Å
Deposited: 2024-08-08
Authors: Lin, H.J., Huang, J., Li, T.M., Li, W.J., Su, N.N., Zhang, J.R., Wu, X.D., Fan, M.R.
PDB entry 9j3l: ATP bound Arabidopsis ATP/ADP translocator AtNTT1
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2024-08-08
Authors: Lin, H.J., Huang, J., Li, T.M., Li, W.J., Su, N.N., Zhang, J.R., Wu, X.D., Fan, M.R.
PDB entry 9j3m: ADP/Pi bound Arabidopsis ATP/ADP translocator AtNTT1
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2024-08-08
Authors: Lin, H.J., Huang, J., Li, T.M., Li, W.J., Su, N.N., Zhang, J.R., Wu, X.D., Fan, M.R.
PDB entry 9j3n: ATP bound Chlamydia pneumoniae ATP/ADP translocator NTT1(Inward open state)
Classification: MEMBRANE PROTEIN
Source organism: Chlamydia pneumoniae; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2024-08-08
Authors: Lin, H.J., Huang, J., Li, T.M., Li, W.J., Su, N.N., Zhang, J.R., Wu, X.D., Fan, M.R.
PDB entry 9j3o: Chlamydia pneumoniae ATP/ADP translocator NTT1(Outward open state)
Classification: MEMBRANE PROTEIN
Source organism: Chlamydia pneumoniae; Vicugna pacos
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-08-08
Authors: Lin, H.J., Huang, J., Li, T.M., Li, W.J., Su, N.N., Zhang, J.R., Wu, X.D., Fan, M.R.
PDB entry 9j3p: Human Pigment Epithelium-Derived Factor with Zinc Ions Crystallized in P2(1)2(1)2(1) Space Group
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-08
Authors: Belousov, A.S., Chistyakov, D.V., Baksheeva, V.E., Bulgakov, T.K., Bukhdruker, S.S., Zamyatnin, A.A., Zinchenko, D.V., Tsvetkov, P.O., Permyakov, S.E., Zernii, E.Y., Borshchevskiy, V.I.
PDB entry 9j3q: Human Pigment Epithelium-Derived Factor with Zinc Ion Crystallized in P22(1)2(1) Space Group
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-08
Authors: Belousov, A.S., Chistyakov, D.V., Baksheeva, V.E., Bulgakov, T.K., Zamyatnin, A.A., Zinchenko, D.V., Wu, L., Tsvetkov, P.O., Permyakov, S.E., Zernii, E.Y., Borshchevskiy, V.I.
PDB entry 9j3r: Enterococcus faecalis ROOL RNA tetramer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.72 Å
Deposited: 2024-08-08
Authors: Wang, L., Xie, J.H., Shang, S.T., Su, Z.M.
PDB entry 9j3s: De Novo Designed Cell-Penetrating Peptide Self-Assembly Featuring Distinctive Tertiary Structure
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2024-08-08
Authors: Park, J., Hyun, S., Lee, S.J.
PDB entry 9j3t: Enterococcus faecalis ROOL RNA octamer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2024-08-08
Authors: Wang, L., Xie, J.H., Shang, S.T., Su, Z.M.
PDB entry 9j3u: Crystal structure of tyrosine phenol-lyase in complex with 3,5-dihydroxybenzoic acid
Classification: LYASE
Source organism: Morganella morganii subsp. morganii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2024-08-08
Authors: Hara, K., Kobayashi, T., Ohishi, S., Hashimoto, H., Watanabe, K., Miyoshi, N.
PDB entry 9j3v: Fe2+/Fe2+ PolF-L-isoleucine complex
Classification: OXIDOREDUCTASE
Source organism: Streptomyces asoensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2024-08-08
Authors: Zhang, Z.Y., Chen, W.Q., Wang, B.J., Qu, Y., Gong, R., Liu, J.
PDB entry 9j3w: Crystal structure of glucose bound beta-glucosidase UnBGl1
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2024-08-08
Authors: Suryawanshi, A.B., Bedi, R.K., Bhaumik, P.
PDB entry 9j3x: Cryo-EM structure of lysosome cholesterol sencing protein LYCHOS in Tight-state
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens; Nomascus leucogenys
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-08
Authors: Qian, H.W., Wang, Z.H.
PDB entry 9j3y: Crystal structure of cellobiose bound beta-glucosidase UnBGl1
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2024-08-08
Authors: Suryawanshi, A.B., Bedi, R.K., Bhaumik, P.
PDB entry 9j3z: Cryo-EM structure of lysosome cholesterol sencing protein in L state
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens; Nomascus leucogenys
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-08-08
Authors: Qian, H.W., Wang, Z.H.
PDB entry 9j40: Cryo-EM structure of lysosome cholesterol sencing protein complex
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens; Nomascus leucogenys
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-08
Authors: Qian, H.W., Wang, Z.H.
PDB entry 9j41: Crystal Structure of glucose tolerant beta-glucosidase UnBGl1 mutant (C188V)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2024-08-09
Authors: Suryawanshi, A.B., Bedi, R.K., Bhaumik, P.
PDB entry 9j42: Crystal structure of Glucsoe bound glucose tolerant GH1 beta-glucosidase mutant (UnBGl1_C188V)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2024-08-09
Authors: Suryawanshi, A.B., Bedi, R.K., Bhaumik, P.
PDB entry 9j43: Crystal Structure of Glucose tolerant GH1 beta-glucosidase mutant (UnBGl1_H261W)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-08-09
Authors: Suryawanshi, A.B., Bhaumik, P.
PDB entry 9j44: Crystal structure of Glucose bound GH1 beta-glucosidase mutant (UnBGl1_H261W)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2024-08-09
Authors: Suryawanshi, A.B., Bhaumik, P.
PDB entry 9j45: Crystal structure of cellobiose and glucose bound glucose toleranant beta-glucosidase mutant (UnBGl1_H261W)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-08-09
Authors: Suryawanshi, A.B., Bhaumik, P.
PDB entry 9j46: Crystal structure of ASFV E146L
Classification: VIRAL PROTEIN
Source organism: African swine fever virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2024-08-09
Authors: Guo, Y.L., Wang, Z.X.
PDB entry 9j47: ScdA cysteine-free mutant from Staphylococcus aureus
Classification: OXYGEN BINDING
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.38 Å
Deposited: 2024-08-09
Authors: Liao, W.Y., Hu, N.J., Chiang, Y.W.
PDB entry 9j48: GFP bound to 24-mer DARPin-apoferritin model 6c
Classification: METAL BINDING PROTEIN/LUMINESCENT PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-08-09
Authors: Lu, X., Yan, M., Zhang, H.M., Hao, Q.
PDB entry 9j49: High resolution crystal strucutre of highly glucose tolerant GH1 beta-glucosidase (UnBGl1_C188V_H261W)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-08-09
Authors: Suryawanshi, A.B., Bhaumik, P.
PDB entry 9j4a: Crystal structure of glucose bound highly glucose tolerant GH1 beta-glcosidase mutant (UnBGl1_C188V_H261W)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-08-09
Authors: Suryawanshi, A.B., Bhaumik, P.
PDB entry 9j4b: Crystal structure of thio-glucose complexed GH1 beta-glucosidase (UnBGl1)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2024-08-09
Authors: Suryawanshi, A.B., Bedi, R.K., Bhaumik, P.
PDB entry 9j4c: Cryo-EM structure of aPlexinA1-19-43 Fab in complex with PlexinA1 dimer
Classification: PROTEIN BINDING/IMMUNE SYSTEM
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.33 Å
Deposited: 2024-08-09
Authors: Tian, H., Fung, C.P.
PDB entry 9j4d: Cryo-EM structure of P25alpha core fibril
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.93 Å
Deposited: 2024-08-09
Authors: Xia, W.C., Sun, Y.P., Huang, C.A., Liu, C.
PDB entry 9j4e: Cryo-EM structure of P25alpha full-length fibril
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.32 Å
Deposited: 2024-08-09
Authors: Xia, W.C., Sun, Y.P., Huang, C.A., Liu, C.
PDB entry 9j4f: Cryo-EM structure of P25alpha full-length A119V fibril
Classification: CYTOSOLIC PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.49 Å
Deposited: 2024-08-09
Authors: Xia, W.C., Sun, Y.P., Huang, C.A., Liu, C.
PDB entry 9j4g: Crystal structure of SHMT from E. faecium with (+)-SHIN-2
Classification: TRANSFERASE
Source organism: Enterococcus faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2024-08-09
Authors: Hayashi, H., Murayama, K.
PDB entry 9j4h: Crystal structure of SHMT apo form
Classification: TRANSFERASE
Source organism: Enterococcus faecium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-08-09
Authors: Murayama, K., Hayashi, H.
PDB entry 9j4i: Crystal structure of GH9l Inulin fructotransferases (IFTase) in compex with fruetosyl nystose (GF4)
Classification: CARBOHYDRATE
Source organism: Paenarthrobacter aurescens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2024-08-09
Authors: Chen, G., Wang, Z.X., Yang, Y.Q., Li, Y.G., Zhang, T., Ouyang, S.Y., Zhang, L., Chen, Y., Ruan, X.L., Miao, M.
PDB entry 9j4j: Crystal structure of GH9l Inulin fructotransferases(IFTase)incomplex with nystose(F3)
Classification: CARBOHYDRATE
Source organism: Paenarthrobacter aurescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.803 Å
Deposited: 2024-08-09
Authors: Chen, G., Wang, Z.X., Yang, Y.Q., Li, Y.G., Zhang, T., Ouyang, S.Y., Zhang, L., Chen, Y., Ruan, X.L., Miao, M.
PDB entry 9j4k: Crystal structure of GH9l Inulinfructotransferases (IFTase) in complex with GF2
Classification: CARBOHYDRATE
Source organism: Paenarthrobacter aurescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.201 Å
Deposited: 2024-08-09
Authors: Chen, G., Wang, Z.X., Yang, Y.Q., Li, Y.G., Zhang, T., Ouyang, S.Y., Zhang, L., Chen, Y., Ruan, X.L., Miao, M.
PDB entry 9j4l: Crystal structure of GH9l Inulin fructotransferases (IFTase)
Classification: CARBOHYDRATE
Source organism: Paenarthrobacter aurescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-08-09
Authors: Chen, G., Wang, Z.X., Yang, Y.Q., Li, Y.G., Zhang, T., Ouyang, S.Y., Zhang, L., Chen, Y., Ruan, X.L., Miao, M.
PDB entry 9j4n: Crystal structure of E. coli Leucine tRNA with UAG anticodon
Classification: RNA
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2024-08-09
Authors: Kim, J., Cho, G.
PDB entry 9j4o: Crystal structure of B. subtilis Leucine tRNA with UAA anticodon
Classification: RNA
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-08-09
Authors: Kim, J., Cho, G.
PDB entry 9j4p: Regulatory domain and kinase domain of ALPK1 protein
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2024-08-09
Authors: Xu, C., Xu, T.
PDB entry 9j4q: Crystal structure of glucose bound covalent intermediate of GH1 beta-glucosidase (UnBGl1)
Classification: HYDROLASE
Source organism: soil metagenome
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-08-09
Authors: Suryawanshi, A.B., Bhaumik, P.
PDB entry 9j4r: Cryo-EM structure of ferric ion importer, FbpBC, from Thermus thermophilus
Classification: MEMBRANE PROTEIN
Source organism: Thermus thermophilus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.09 Å
Deposited: 2024-08-09
Authors: Lu, P., Nagata, K., Kise, Y., Nureki, O.
PDB entry 9j4s: Structural basis for recognition of SARS-CoV-2 conserved nucleocapside epitopes by dominant T cell receptors
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2024-08-10
Authors: Yuan, P., Wu, D.C.
PDB entry 9j4t: Structural basis for recognition of SARS-CoV-2 conserved nucleocapside epitopes by dominant T cell receptors
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2024-08-10
Authors: Yuan, P., Wu, D.C.
PDB entry 9j4u: Structural basis for recognition of SARS-CoV-2 conserved nucleocapside epitopes by dominant T cell receptors
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.17 Å
Deposited: 2024-08-10
Authors: Yuan, P., Wu, D.C.
PDB entry 9j4v: Structural basis for recognition of SARS-CoV-2 conserved nucleocapside epitopes by dominant T cell receptors
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2024-08-10
Authors: Yuan, P., Wu, D.C.
PDB entry 9j4x: CryoEM structure of human XPR1 in apo state
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-08-10
Authors: Zhang, W.H., Chen, Y.K., Guan, Z.Y., Liu, Z.
PDB entry 9j4y: Crystal Structure of the L322F mutant of Omega Transaminase TA_2799 from Pseudomonas putida KT2440
Classification: TRANSFERASE
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-08-10
Authors: Das, P., Bhaumik, P.
PDB entry 9j4z: Crystal structure of the open state of omega transaminase TA_5182 from Pseudomonas putida KT2440
Classification: TRANSFERASE
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2024-08-10
Authors: Das, P., Bhaumik, P.
PDB entry 9j50: Crystal structure of the closed state of the omega transaminase TA_5182 from Pseudomonas putida KT2440
Classification: TRANSFERASE
Source organism: Pseudomonas putida KT2440
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2024-08-10
Authors: Das, P., Bhaumik, P.
PDB entry 9j51: CryoEM structure of human XPR1 in complex with phosphate in state A
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-08-11
Authors: Zhang, W.H., Chen, Y.K., Guan, Z.Y., Liu, Z.
PDB entry 9j52: CryoEM structure of human XPR1 in complex with phosphate in state B
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2024-08-11
Authors: Zhang, W.H., Chen, Y.K., Guan, Z.Y., Liu, Z.
PDB entry 9j53: CryoEM structure of human XPR1 in complex with phosphate in state C
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-11
Authors: Zhang, W.H., Chen, Y.K., Guan, Z.Y., Liu, Z.
PDB entry 9j54: Crystal structure of FIP200 Claw in complex with ATG16L1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.61 Å
Deposited: 2024-08-11
Authors: Gong, X.Y., Pan, L.F.
PDB entry 9j56: Functional Investigation of the SAM-Dependent Methyltransferases Rdmb in Anthracycline Biosynthesis
Classification: TRANSFERASE
Source organism: Streptomyces purpurascens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-11
Authors: Yang, Q.Y., Sang, M.L., Zhang, W.
PDB entry 9j57: ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with paranitrophenyl butyrate
Classification: HYDROLASE
Source organism: Sulfobacillus acidophilus DSM 10332
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-08-11
Authors: Verma, S., Kumar, P.
PDB entry 9j58: ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with jeffamine
Classification: HYDROLASE
Source organism: Sulfobacillus acidophilus DSM 10332
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-08-11
Authors: Verma, S., Kumar, P.
PDB entry 9j59: ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus
Classification: HYDROLASE
Source organism: Sulfobacillus acidophilus DSM 10332
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2024-08-11
Authors: Verma, S., Kumar, P.
PDB entry 9j5a: ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with p-nitrophenol
Classification: HYDROLASE
Source organism: Sulfobacillus acidophilus DSM 10332
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-08-11
Authors: Verma, S., Kumar, P.
PDB entry 9j5b: ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with Dimethyl phthalate
Classification: HYDROLASE
Source organism: Sulfobacillus acidophilus DSM 10332
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2024-08-11
Authors: Verma, S., Kumar, P.
PDB entry 9j5c: ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with diethylhexyl phthalate
Classification: HYDROLASE
Source organism: Sulfobacillus acidophilus DSM 10332
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2024-08-11
Authors: Verma, S., Kumar, P.
PDB entry 9j5d: ESTS1 phthalate ester degrading esterase from Sulfobacillus acidophilus in complex with dimethyl phthalate on surface
Classification: HYDROLASE
Source organism: Sulfobacillus acidophilus DSM 10332
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2024-08-11
Authors: Verma, S., Kumar, P.
PDB entry 9j5e: Crystal structure of Hir2_WD40 in complex with Hpc2_NHRD
Classification: CHAPERONE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2024-08-12
Authors: Lin, C.-L.
PDB entry 9j5f: Solution structure of disulfide-directed multicyclic peptides with n-terminal helix
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2024-08-12
Authors: Fan, S.H., Wu, C.L.
PDB entry 9j5g: Autophagy-related proteins of Magnaporthe oryzae-MoAtg8
Classification: APOPTOSIS
Source organism: Pyricularia oryzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-08-12
Authors: Yan, J.Y., Zhu, X.M.
PDB entry 9j5h: Solution structure of disulfide-directed multicyclic peptides with affinity to pdl1
Classification: UNKNOWN FUNCTION
Experimental method: SOLUTION NMR
Deposited: 2024-08-12
Authors: Fan, S.H., Wu, C.L.
PDB entry 9j5i: Pathogen effector forms a phosphatase holoenzyme complex with host core enzyme to promote disease
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Homo sapiens; Phytophthora sojae
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.38 Å
Deposited: 2024-08-12
Authors: Wang, Y.L., Wang, J.L.
PDB entry 9j5j: Cryo-EM structure of BTN2A1-BTN3A1-BTN3A2 in complex with gdTCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.05 Å
Deposited: 2024-08-12
Authors: Zhu, Y., Gao, W., Huang, Z.
PDB entry 9j5k: Pathogen effector forms a phosphatase holoenzyme complex with host core enzyme to promote disease
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Homo sapiens; Phytophthora sojae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2024-08-12
Authors: Wang, J.L., Wang, Y.L.
PDB entry 9j5l: Complex structure of influenza hemagglutinin HA stem with CR9114 Fab and FISW84 Fab
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.97 Å
Deposited: 2024-08-12
Authors: Ru, Y.X., Liu, D.J., Deng, L., Li, Y.W.
PDB entry 9j5m: Cryo-EM structure of the ectodomain of BTN2A1-BTN3A1-BTN3A2 in complex with gdTCR
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.94 Å
Deposited: 2024-08-12
Authors: Zhu, Y., Gao, W., Huang, Z.
PDB entry 9j5n: Pathogen effector forms a phosphatase holoenzyme complex with host core enzyme to promote disease
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Homo sapiens; Phytophthora sojae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-08-13
Authors: Wang, Y.L., Wang, J.L.
PDB entry 9j5o: Cryo-EM structure of TrhO from B. subtilis complexed with tRNA Ala
Classification: RNA BINDING PROTEIN
Source organism: Bacillus subtilis subsp. subtilis str. 168; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.04 Å
Deposited: 2024-08-13
Authors: Shin, K., Kim, J.
PDB entry 9j5p: Crystal structure of B. subtilis CspR complexed with sinefungin and cellularly expressed tRNA Leu
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å
Deposited: 2024-08-13
Authors: Yoo, J., Kim, J.
PDB entry 9j5q: Imine Reductase from Burholderia ubonensis in complex with NADPH
Classification: OXIDOREDUCTASE
Source organism: Burkholderia ubonensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2024-08-13
Authors: Ma, Z.F., Shen, X.Y.
PDB entry 9j5r: Pathogen effector forms a phosphatase holoenzyme complex with host core enzyme to promote disease
Classification: PLANT PROTEIN
Source organism: Arabidopsis thaliana; Homo sapiens; Phytophthora sojae
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.3 Å
Deposited: 2024-08-13
Authors: Wang, Y.L., Wang, J.L.
PDB entry 9j5s: Crystal structure of human G3BP1 in complex with CHIKV nsP3 peptide
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2024-08-13
Authors: Liu, Y.Z., Lei, J.
PDB entry 9j5t: Imine Reductase from Burkholderia ubonensis in complex with NADH
Classification: OXIDOREDUCTASE
Source organism: Burkholderia ubonensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2024-08-13
Authors: Ma, Z.F., Shen, X.Y.
PDB entry 9j5u: Cryo-EM structure of Bat SARS-like coronavirus Khosta-2 spike protein
Classification: VIRAL PROTEIN
Source organism: Bat SARS-like coronavirus Khosta-2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.25 Å
Deposited: 2024-08-13
Authors: Pan, X.Q., Li, L.J., Liu, K.F., Qi, J.X., Gao, G.F.
PDB entry 9j5v: Human Lysophosphatidic Acid Receptor 1-Gi complex bound to CpY
Classification: MEMBRANE PROTEIN
Source organism: Bos taurus; Homo sapiens; Mus musculus; Rattus norvegicus; synthetic construct
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2024-08-13
Authors: Akasaka, H., Shihoya, W., Nureki, O.
PDB entry 9j5w: Cryo-EM Structure of URAT1 in Complex with Benzbromarone
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-08-13
Authors: Fan, J., Lei, X.
PDB entry 9j5x: Cryo-EM Structure of URAT1 in Complex with Lingolinurad
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44 Å
Deposited: 2024-08-13
Authors: Fan, J., Lei, X.
PDB entry 9j5z: Cryo-EM Structure of URAT1 in Complex with Verinurad
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-08-13
Authors: Fan, J., Lei, X.
PDB entry 9j60: Cryo-EM structure of the rice isoamylase ISA1 dimer
Classification: HYDROLASE
Source organism: Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.7 Å
Deposited: 2024-08-14
Authors: Guan, Z.Y., Yan, J.J.
PDB entry 9j61: Crystal structure of a cyclodipeptide synthase from Streptomyces sapporonensis
Classification: LIGASE
Source organism: Streptomyces cinnamoneus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2024-08-14
Authors: Li, P., Ren, Y., He, J., Wu, S., Wang, J., Tang, G., Fang, P.
PDB entry 9j62: Cryo-EM structure of Bat SARS-like coronavirus Khosta-2 spike protein in complex with human ACE2 (local refined)
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Bat SARS-like coronavirus Khosta-2; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.76 Å
Deposited: 2024-08-14
Authors: Pan, X.Q., Li, L.J., Liu, K.F., Qi, J.X., Gao, G.F.
PDB entry 9j63: Cryo-EM structure of neddylated Cul2-Rbx1-EloBC-FEM1B homodimer
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2024-08-14
Authors: Dai, Z., Liang, L., Yin, Y.X.
PDB entry 9j64: Cryo-EM structure of neddylated Cul2-Rbx1-EloBC-FEM1B homodimer complexed with FNIP1 degron
Classification: LIGASE
Source organism: Escherichia coli K-12; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.28 Å
Deposited: 2024-08-14
Authors: Dai, Z., Liang, L., Yin, Y.X.
PDB entry 9j66: Cryo-EM structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment CAV-C65 (local refinement)
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2024-08-15
Authors: Jing, X., Chen, Y., Gong, P.
PDB entry 9j67: Crystal structure of an oxidoreductase from Streptomyces aureocirculatus
Classification: OXIDOREDUCTASE
Source organism: Streptomyces aureocirculatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.93 Å
Deposited: 2024-08-15
Authors: Li, Q., Xu, Z.F., Feng, J.H., Liu, X.T., Liu, W.D., Yao, P.Y., Wu, Q.Q., Zhu, D.M.
PDB entry 9j6a: Crystal structure of oxidoreductase mutant M1 from Streptomyces aureocirculatus
Classification: OXIDOREDUCTASE
Source organism: Streptomyces aureocirculatus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.99 Å
Deposited: 2024-08-15
Authors: Li, Q., Xu, Z.F., Feng, J.H., Liu, X.T., Liu, W.D., Yao, P.Y., Wu, Q.Q., Zhu, D.M.
PDB entry 9j6c: Crystal structure of an oxidoreductase mutant M4 from Streptomyces aureocirculatus
Classification: OXIDOREDUCTASE
Source organism: Streptomyces aureocirculatus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.32 Å
Deposited: 2024-08-15
Authors: Li, Q., Xu, Z.F., Feng, J.H., Liu, X.T., Liu, W.D., Yao, P.Y., Wu, Q.Q., Zhu, D.M.
PDB entry 9j6d: Structure of Chikungunya virus infectious particles, 2f block.
Classification: VIRUS
Source organism: Chikungunya virus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å
Deposited: 2024-08-15
Authors: Han, X., Ji, C., Wang, F., Tian, S., Gao, F.G., Yan, J.
PDB entry 9j6e: Crystal structure of BioZ from Agrobacterium tumefaciens in complex with galutaryl-CoA
Classification: BIOSYNTHETIC PROTEIN
Source organism: Agrobacterium fabrum (strain C58 / ATCC 33970)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2024-08-15
Authors: Zhang, L., Zhang, L.
PDB entry 9j6g: Cryo-EM structure of Bat SARS-like coronavirus Khosta-1 spike protein
Classification: VIRAL PROTEIN
Source organism: Bat SARS-like coronavirus Khosta-1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-08-15
Authors: Pan, X.Q., Li, L.J., Liu, K.F., Qi, J.X., Gao, G.F.
PDB entry 9j6h: Complex I from respirasome closed state 1 bound by metformin and CoQ10 (SC-MetC1-iv)
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.92 Å
Deposited: 2024-08-16
Authors: Teng, F., He, Z.X., Hu, Y.Q., Xu, C.Y., Guo, R.Y., Zhou, L.
PDB entry 9j6i: Crystal structure of the ABA receptor PYL1 in complex with DBSA compound
Classification: LIPID BINDING PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2024-08-16
Authors: Yan, J.
PDB entry 9j6j: HBx fused DDB1 4M mutant
Classification: VIRAL PROTEIN
Source organism: Hepatitis B virus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2024-08-16
Authors: Tanaka, H., Kita, S., Sasaki, M., Maenaka, K., Machida, S.
PDB entry 9j6k: HBx complexed with DDB1
Classification: VIRAL PROTEIN
Source organism: Hepatitis B virus; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.68 Å
Deposited: 2024-08-16
Authors: Tanaka, H., Kita, S., Sasaki, M., Maenaka, K., Machida, S.
PDB entry 9j6l: Solution structure of human Glutathione Peroxidase 4 (Sec73Cys) with eight mutations
Classification: APOPTOSIS
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2024-08-16
Authors: Furuita, K., Sugiki, T., Inomata, K., Miyanoiri, Y., Kobayashi, N., Fujiwara, T., Kojima, C.
PDB entry 9j6m: beta-D-galactofuranosidase ORF1110 from Streptomyces sp. JHA19, ligand-free form
Classification: HYDROLASE
Source organism: Streptomyces sp. JHA19
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2024-08-16
Authors: Fujio, N., Yamada, C., Takegawa, K., Fushinobu, S.
PDB entry 9j6n: beta-D-galactofuranosidase ORF1110 from Streptomyces sp. JHA19, D-iminogalactitol complex
Classification: HYDROLASE
Source organism: Streptomyces sp. JHA19
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2024-08-16
Authors: Fujio, N., Yamada, C., Takegawa, K., Fushinobu, S.
PDB entry 9j6o: Crystal Structure of bromodomain of human CBP in complex with the inhibitor CZL-046
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2024-08-16
Authors: Zhang, Y., Zhang, C., Chen, Z., Yang, H., Huang, X., Li, Y., Xu, Y.
PDB entry 9j6p: pre-mir-125a internal loop in complex with G-clamp
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2024-08-16
Authors: Kondo, J., Nagasawa, R., Onizuka, K., Kawamura, K., Tsuzuki, K., Murase, H., Komatsu, K.R., Miyashita, E., Saito, H., Nagatsugi, F.
PDB entry 9j6r: Cryo-EM structure of human dopamine transporter in complex with dasotraline
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2024-08-17
Authors: Zhao, Y., Li, Y.
PDB entry 9j6s: Cryo-EM structure of human dopamine transporter in complex with tesofensine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-08-17
Authors: Zhao, Y., Li, Y.
PDB entry 9j6t: Cryo-EM structure of human dopamine transporter in complex with centanafadine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2024-08-17
Authors: Zhao, Y., Li, Y.
PDB entry 9j6u: Cryo-EM structure of human dopamine transporter in complex with ansofasine
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2024-08-17
Authors: Zhao, Y., Li, Y.
PDB entry 9j6v: Cryo-EM structure of human dopamine transporter in complex with nefazodone
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-08-17
Authors: Zhao, Y., Li, Y.
PDB entry 9j6w: Complex I from respirasome closed state 1 bound by metformin and CoQ10 (SC-MetC1-v)
Classification: MEMBRANE PROTEIN
Source organism: Sus scrofa
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2024-08-17
Authors: Teng, F., He, Z.X., Hu, Y.Q., Xu, C.Y., Guo, R.Y., Zhou, L.
PDB entry 9j6x: Cryo-EM structure of the rice isoamylase ISA1-ISA2 heterocomplex
Classification: HYDROLASE
Source organism: Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.4 Å
Deposited: 2024-08-17
Authors: Guan, Z.Y., Yan, J.J.
PDB entry 9j6y: Lactobacillus salivarius ROOL RNA hexamer
Classification: RNA
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.25 Å
Deposited: 2024-08-17
Authors: Wang, L., Xie, J.H., Shang, S.T., Su, Z.M.
PDB entry 9j6z: Structure of AAV8 in complex with its receptor
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Adeno-associated virus - 8; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.02 Å
Deposited: 2024-08-17
Authors: Xu, H., Wang, G.P., Su, X.D.
PDB entry 9j70: Crystal structure of Keap1 dimer
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-08-17
Authors: Xu, K.
PDB entry 9j71: Crystal strcuture of Keap1_compound_7
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.993 Å
Deposited: 2024-08-17
Authors: Xu, K.
PDB entry 9j72: Cryo-EM structure of URAT1 in complex with uric acid
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.47 Å
Deposited: 2024-08-18
Authors: Zhao, Y., Yu, Z.
PDB entry 9j73: Cryo-EM structure of URAT1 in complex with benzbromarone
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-08-18
Authors: Zhao, Y., Yu, Z.
PDB entry 9j74: Cryo-EM structure of URAT1 in complex with lesinurad
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2024-08-18
Authors: Zhao, Y., Yu, Z.
PDB entry 9j75: Cryo-EM structure of URAT1 in complex with verinurad
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2024-08-18
Authors: Zhao, Y., Yu, Z.
PDB entry 9j76: Cryo-EM structure of URAT1 in complex with sulfinpyrazone
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.51 Å
Deposited: 2024-08-18
Authors: Zhao, Y., Yu, Z.
PDB entry 9j77: Cryo-EM structure of CRL2-FEM1B (dimer 1)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.56 Å
Deposited: 2024-08-18
Authors: Zhao, S., Xu, C.
PDB entry 9j78: Cryo-EM structure of CRL2-FEM1B (dimer 2)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.88 Å
Deposited: 2024-08-18
Authors: Zhao, S., Xu, C.
PDB entry 9j79: Cryo-EM structure of CRL2-FEM1B bound with TOM20(tetramer)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.08 Å
Deposited: 2024-08-18
Authors: Zhao, S., Xu, C.
PDB entry 9j7a: local refinement of FEM1B bound with TOM20 (dimer)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.13 Å
Deposited: 2024-08-18
Authors: Zhao, S., Xu, C.
PDB entry 9j7b: local refinement of FEM1B bound with TOM20(tetramer)
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.12 Å
Deposited: 2024-08-18
Authors: Zhao, S., Xu, C.
PDB entry 9j7c: Arabidopsis high-affinity urea transport DUR3 in the urea-bound occluded conformation, dimeric state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2024-08-18
Authors: An, W., Gao, Y., Zhang, X.C.
PDB entry 9j7d: Arabidopsis high-affinity urea transport DUR3 in the inward-facing open conformation, dimeric state
Classification: MEMBRANE PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2024-08-18
Authors: An, W., Gao, Y., Zhang, X.C.
PDB entry 9j7f: Crystal strcuture of Keap1_compound_1
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.993 Å
Deposited: 2024-08-18
Authors: Xu, K.
PDB entry 9j7g: Crystal strcuture of Keap1_compound_8
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.993 Å
Deposited: 2024-08-18
Authors: Xu, K.
PDB entry 9j7h: Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Providencia alcalifaciens complexed with quinic acid
Classification: TRANSFERASE
Source organism: Providencia alcalifaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.68 Å
Deposited: 2024-08-19
Authors: Jangid, K., Mahto, J.K., Kumar, K.A., Kumar, P.
PDB entry 9j7i: Cryo-EM Structure of calcium sensing receptor in complex gamma-glutamyl-valyl-glycine as a kokumi substance
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.55 Å
Deposited: 2024-08-19
Authors: Yamaguchi, H., Kitajima, S., Suzuki, H., Suzuki, S., Nishikawa, K., Maruyama, Y., Kamegawa, A., Kazutoshi, T., Tagami, U., Kuroda, M., Fujiyoshi, Y., Sugiki, M.
PDB entry 9j7j: The crystal structure of RipG4 LRR domain
Classification: IMMUNOSUPPRESSANT
Source organism: Ralstonia solanacearum UW551
Experimental method: X-RAY DIFFRACTION
Resolution: 3.35 Å
Deposited: 2024-08-19
Authors: Jung, E.H., Kim, M.S.
PDB entry 9j7k: Structure of AAV8 in the complex of AAV8 with its receptor
Classification: VIRUS
Source organism: Adeno-associated virus - 8
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.32 Å
Deposited: 2024-08-19
Authors: Xu, H., Wang, G.P., Su, X.D.
PDB entry 9j7l: Structure of AAV8 capsid in complex with receptor
Classification: VIRAL PROTEIN/HYDROLASE
Source organism: Adeno-associated virus - 8; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.89 Å
Deposited: 2024-08-19
Authors: Xu, H., Wang, G.P., Su, X.D.
PDB entry 9j7m: Cryo-EM structure of TauT
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.82 Å
Deposited: 2024-08-19
Authors: Zhao, Y., Xu, H.
PDB entry 9j7n: Cryo-EM structure of TauT
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-08-19
Authors: Zhao, Y., Xu, H.
PDB entry 9j7o: Cryo-EM structure of TauT
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.77 Å
Deposited: 2024-08-19
Authors: Zhao, Y., Xu, H.
PDB entry 9j7p: Crystal structure of S. aureus MccB mutant S323A
Classification: LYASE
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2024-08-19
Authors: Ha, N.-C., Lee, D., Lee, H., Byun, K.
PDB entry 9j7q: Crystal structure of S. aureus MccB with PLP
Classification: LYASE
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2024-08-19
Authors: Ha, N.-C., Lee, D., Lee, H., Byun, K.
PDB entry 9j7r: Crystal structure of S. aureus MccB mutant K196A
Classification: LYASE
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-08-19
Authors: Ha, N.-C., Lee, D., Lee, H., Byun, K.
PDB entry 9j7s: Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase) from Providencia alcalifaciens complexed with Phe
Classification: TRANSFERASE
Source organism: Providencia alcalifaciens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2024-08-19
Authors: Jangid, K., Mahto, J.K., Kumar, K.A., Kumar, P.
PDB entry 9j7t: De Novo Designed Cell-Penetrating Peptide Self-Assembly Featuring Distinctive Tertiary Structure
Classification: DE NOVO PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2024-08-19
Authors: Park, J., Hyun, S., Lee, S.J.
PDB entry 9j7u: H176A mutant of human G6PC1 in complex with G6P
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14 Å
Deposited: 2024-08-19
Authors: Jiang, D.H., Xia, Z.Y.
PDB entry 9j7v: Human G6PC1 in apo state
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2024-08-19
Authors: Jiang, D.H., Xia, Z.Y.
PDB entry 9j7w: Channel Rhodospin from Klebsormidium nitens (KnChR)
Classification: ELECTRON TRANSPORT
Source organism: Klebsormidium nitens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.69 Å
Deposited: 2024-08-20
Authors: Wang, Y.Z., Akasaka, H., Tanaka, T., Sano, F.K., Shihoya, W., Nureki, O.
PDB entry 9j7x: Crystal structure of quintuple mutant C terminal fragment of Clostridium perfringens enterotoxin (C-CPEm19)
Classification: TOXIN
Source organism: Clostridium perfringens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2024-08-20
Authors: Aoyama, H.
PDB entry 9j7y: the complex structure of MPXV M1R and nanobody M1R-01
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Monkeypox virus; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2024-08-20
Authors: Ge, J.W., Fan, M.