LiteFold/PDB huggingface dataset:
PDB entry 4pag: ABC transporter solute binding protein from Sulfurospirillum deleyianum DSM 6946
Classification: TRANSPORT PROTEIN
Source organism: Sulfurospirillum deleyianum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.901 Å
Deposited: 2014-04-08
Authors: Chang, C., Endres, M., Li, H., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4pah: HUMAN PHENYLALANINE HYDROXYLASE CATALYTIC DOMAIN DIMER WITH BOUND NOR-ADRENALINE INHIBITOR
Classification: MONOOXYGENASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 1998-08-20
Authors: Erlandsen, H., Flatmark, T., Stevens, R.C.
PDB entry 4pai: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RUEGERIA POMEROYI DSS-3 (SPO1773, TARGET EFI-510260) WITH BOUND 3-HYDROXYBENZOATE
Classification: SOLUTE-BINDING PROTEIN
Source organism: Ruegeria pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2014-04-09
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4pak: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM VERMINEPHROBACTER EISENIAE EF01-2 (Veis_3954, TARGET EFI-510324) A NEPHRIDIAL SYMBIONT OF THE EARTHWORM EISENIA FOETIDA, BOUND TO (R)-PANTOIC ACID
Classification: SOLUTE-BINDING PROTEIN
Source organism: Verminephrobacter eiseniae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2014-04-09
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4pal: IONIC INTERACTIONS WITH PARVALBUMINS. CRYSTAL STRUCTURE DETERMINATION OF PIKE 4.10 PARVALBUMIN IN FOUR DIFFERENT IONIC ENVIRONMENTS
Classification: CALCIUM BINDING PROTEIN
Source organism: Esox lucius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1990-11-08
Authors: Declercq, J.P., Tinant, B., Parello, J., Rambaud, J.
PDB entry 4pam: A conserved phenylalanine as relay between the 5 helix and the GDP binding region of heterotrimeric G protein
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.101 Å
Deposited: 2014-04-09
Authors: Kaya, A.I., Lokits, A.D., Gilbert, J., Iverson, T.M., Meiler, J., Hamm, H.E.
PDB entry 4pan: A conserved phenylalanine as relay between the 5 helix and the GDP binding region of heterotrimeric G protein
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-04-09
Authors: Kaya, A.I., Lokits, A.D., Gilbert, J., Iverson, T.M., Meiler, J., Hamm, H.E.
PDB entry 4pao: A conserved phenylalanine as relay between the 5 helix and the GDP binding region of heterotrimeric G protein
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.003 Å
Deposited: 2014-04-09
Authors: Kaya, A.I., Lokits, A.D., Gilbert, J., Iverson, T.M., Meiler, J., Hamm, H.E.
PDB entry 4paq: A conserved phenylalanine as relay between the 5 helix and the GDP binding region of heterotrimeric G protein
Classification: SIGNALING PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-04-09
Authors: Kaya, A.I., Lokits, A.D., Gilbert, J., Iverson, T.M., Meiler, J., Hamm, H.E.
PDB entry 4par: The 5-Hydroxymethylcytosine-Specific Restriction Enzyme AbaSI in a Complex with Product-like DNA
Classification: DNA Binding Protein/DNA
Source organism: Acinetobacter baumannii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.89 Å
Deposited: 2014-04-09
Authors: Horton, J.R., Cheng, X.
PDB entry 4pas: Heterodimeric coiled-coil structure of human GABA(B) receptor
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2014-04-10
Authors: Burmakina, S., Geng, Y., Chen, Y., Fan, Q.R.
PDB entry 4pau: Hypothetical protein SA1058 from S. aureus.
Classification: UNKNOWN FUNCTION
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-04-10
Authors: Battaile, K.P., Wu-Brown, J., Romanov, V., Jones, K., Lam, R., Pai, E.F., Chirgadze, N.Y.
PDB entry 4pav: Structure of hypothetical protein SA1046 from S. aureus.
Classification: UNKNOWN FUNCTION
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2014-04-10
Authors: Battaile, K.P., Mulichak, A., Lam, R., Lam, K., Soloveychik, M., Romanov, V., Jones, K., Pai, E.F., Chirgadze, N.Y.
PDB entry 4paw: Structure of hypothetical protein HP1257.
Classification: TRANSFERASE
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2014-04-10
Authors: Battaile, K.P., Lam, R., Lam, K., Romanov, V., Jones, K., Soloveychik, M., Pai, E.F., Chirgadze, N.Y.
PDB entry 4pax: THE CATALYTIC FRAGMENT OF POLY(ADP-RIBOSE) POLYMERASE COMPLEXED WITH 8-HYDROXY-2-METHYL-3-HYDRO-QUINAZOLIN-4-ONE
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 1997-11-25
Authors: Ruf, A., Schulz, G.E.
PDB entry 4pay: Crystal structure of an N-terminal fragment of the Legionella pneumophila effector protein SidC.
Classification: TRANSPORT PROTEIN
Source organism: Legionella pneumophila subsp. pneumophila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.77 Å
Deposited: 2014-04-10
Authors: Horenkamp, F.A., Mukherjee, S., Alix, E., Schauder, C.M., Hubber, A.M., Roy, C.R., Reinisch, K.M.
PDB entry 4paz: OXIDIZED MUTANT P80A PSEUDOAZURIN FROM A. FAECALIS
Classification: ELECTRON TRANSFER
Source organism: Alcaligenes faecalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 1997-02-20
Authors: Adman, E.T., Libeu, C.A.P.
PDB entry 4pb0: Structure of the Fab fragment of the anti-Francisella tularensis GroEL antibody Ab53
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-04-10
Authors: Lu, Z., Rynkiewicz, M.J., Seaton, B.A., Sharon, J.
PDB entry 4pb1: Structure of vcCNT-7C8C bound to ribavirin
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.803 Å
Deposited: 2014-04-11
Authors: Johnson, Z.L., Lee, S.-Y.
PDB entry 4pb2: Structure of vcCNT-7C8C bound to 5-fluorouridine
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.302 Å
Deposited: 2014-04-11
Authors: Johnson, Z.L., Lee, S.-Y.
PDB entry 4pb3: D-threo-3-hydroxyaspartate dehydratase H351A mutant
Classification: LYASE
Source organism: Delftia sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-04-11
Authors: Yasutake, Y., Matsumoto, Y., Wada, M.
PDB entry 4pb4: D-threo-3-hydroxyaspartate dehydratase H351A mutant complexed with 2-amino maleic acid
Classification: LYASE
Source organism: Delftia sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-04-11
Authors: Yasutake, Y., Matsumoto, Y., Wada, M.
PDB entry 4pb5: D-threo-3-hydroxyaspartate dehydratase H351A mutant complexed with L-erythro-3-hydroxyaspartate
Classification: LYASE
Source organism: Delftia sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-04-11
Authors: Yasutake, Y., Matsumoto, Y., Wada, M.
PDB entry 4pb6: Feline calicivirus VP1 T=1 virus-like particle
Classification: VIRUS
Source organism: Feline calicivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 8 Å
Deposited: 2014-04-11
Authors: Burmeister, W.P., Buisson, M.
PDB entry 4pb9: Structure of the Fab fragment of the anti-Francisella tularensis GroEL antibody Ab64
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-04-11
Authors: Lu, Z., Rynkiewicz, M.J., Seaton, B.A., Sharon, J.
PDB entry 4pba: The 5-Hydroxymethylcytosine-Specific Restriction Enzyme AbaSI in a Complex with Substrate-like DNA
Classification: DNA Binding Protein/DNA
Source organism: Acinetobacter baumannii; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.301 Å
Deposited: 2014-04-11
Authors: Horton, J.R., Cheng, X.
PDB entry 4pbb: The 5-Hydroxymethylcytosine-Specific Restriction Enzyme AbaSI
Classification: DNA BINDING PROTEIN
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.46 Å
Deposited: 2014-04-11
Authors: Horton, J.R., Cheng, X.
PDB entry 4pbc: X-ray crystal structure of a putative D-amino acid aminotransferase from Burkholderia cenocepacia
Classification: TRANSFERASE
Source organism: Burkholderia cenocepacia
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-04-12
Authors: Fairman, J.W., Abendroth, J., Edwards, T.E., Lorimer, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4pbd: Crystal structure of the N-terminal CS domain of human Shq1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2014-04-12
Authors: Singh, M., Wang, Z., Cascio, D., Feigon, J.
PDB entry 4pbe: Phosphotriesterase Variant Rev6
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2014-04-12
Authors: Campbell, E., Kaltenbach, M., Tokuriki, N., Jackson, C.J.
PDB entry 4pbf: Phosphotriesterase variant Rev12
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-04-12
Authors: Campbell, E., Kaltenbach, M., Tokuriki, N., Jackson, C.J.
PDB entry 4pbg: 6-PHOSPHO-BETA-GALACTOSIDASE FORM-CST
Classification: HYDROLASE
Source organism: Lactococcus lactis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 1997-02-21
Authors: Wiesmann, C., Schulz, G.E.
PDB entry 4pbh: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RUEGERIA POMEROYI DSS-3 (SPO1773, TARGET EFI-510260) WITH BOUND BENZOIC ACID
Classification: SOLUTE-BINDING PROTEIN
Source organism: Ruegeria pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2014-04-12
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4pbo: Crystal structure of zebrafish short-chain pentraxin protein without calcium ions
Classification: IMMUNE SYSTEM
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2014-04-13
Authors: Chen, R., Qi, J.X., George, F.G., Xia, C.
PDB entry 4pbp: crystal structure of zebrafish short-chain pentraxin protein
Classification: IMMUNE SYSTEM
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.648 Å
Deposited: 2014-04-13
Authors: Chen, R., Qi, J.X., George, F.G., Xia, C.
PDB entry 4pbq: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM HAEMOPHILUS INFLUENZAE RdAW (HICG_00826, TARGET EFI-510123) WITH BOUND L-GULONATE
Classification: SOLUTE-BINDING PROTEIN
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2014-04-13
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4pbr: Crystal structure of the M. jannaschii G2 tRNA synthetase variant bound to 4-(2-bromoisobutyramido)-phenylalanine (BibaF)
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-04-13
Authors: Cooley, R.B., Karplus, P.A., Mehl, R.A.
PDB entry 4pbs: Crystal structure of the M. jannaschii F9 tRNA synthetase variant bound to 4-(2-bromoisobutyramido)-phenylalanine (BibaF)
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.011 Å
Deposited: 2014-04-13
Authors: Cooley, R.B., Karplus, P.A., Mehl, R.A.
PDB entry 4pbt: Crystal structure of the M. jannaschii G2 tRNA synthetase variant bound to 4-trans-cyclooctene-amidopheylalanine (Tco-amF)
Classification: LIGASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-04-13
Authors: Cooley, R.B., Karplus, P.A., Mehl, R.A.
PDB entry 4pbu: Serial Time-resolved crystallography of Photosystem II using a femtosecond X-ray laser The S1 state
Classification: PHOTOSYNTHESIS
Source organism: Thermosynechococcus elongatus
Experimental method: X-RAY DIFFRACTION
Resolution: 5 Å
Deposited: 2014-04-13
Authors: Kupitz, C., Basu, S., Grotjohann, I., Fromme, R., Zatsepin, N., Rendek, K.N., Hunter, M., Shoeman, R.L., White, T.A., Wang, D., James, D., Yang, J.H., Cobb, D.E., Reeder, B., Sierra, R.G., Liu, H., Barty, A., Aquila, A., Deponte, D., Kirian, R.A., Bari, S., Bergkamp, J.J., Beyerlein, K., Bogan, M.J., Caleman, C., Chao, T.-C., Conrad, C.E., Davis, K.M., Fleckenstein, H., Galli, L., Hau-Riege, S.P., Kassemeyer, S., Laksmono, H., Liang, M., Lomb, L., Marchesini, S., Martin, A.V., Messerschmidt, M., Milathianaki, D., Nass, K., Ros, A., Roy-Chowdhury, S., Schmidt, K., Seibert, M., Steinbrener, J., Stellato, F., Yan, L., Yoon, C., Moore, T.A., Moore, A.L., Pushkar, Y., Williams, G.J., Boutet, S., Doak, R.B., Weierstall, U., Frank, M., Chapman, H.N., Spence, J.C.H., Fromme, P.
PDB entry 4pbv: Crystal structure of chicken receptor protein tyrosine phosphatase sigma in complex with TrkC
Classification: SIGNALING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-04-14
Authors: Coles, C.H., Mitakidis, N., Zhang, P., Elegheert, J., Lu, W., Stoker, A.W., Nakagawa, T., Craig, A.M., Jones, E.Y., Aricescu, A.R.
PDB entry 4pbw: Crystal structure of chicken receptor protein tyrosine phosphatase sigma in complex with TrkC
Classification: SIGNALING PROTEIN
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.05 Å
Deposited: 2014-04-14
Authors: Coles, C.H., Mitakidis, N., Zhang, P., Elegheert, J., Lu, W., Stoker, A.W., Nakagawa, T., Craig, A.M., Jones, E.Y., Aricescu, A.R.
PDB entry 4pbx: Crystal structure of the six N-terminal domains of human receptor protein tyrosine phosphatase sigma
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2014-04-14
Authors: Coles, C.H., Mitakidis, N., Zhang, P., Elegheert, J., Lu, W., Stoker, A.W., Nakagawa, T., Craig, A.M., Jones, E.Y., Aricescu, A.R.
PDB entry 4pby: Structure of the human RbAp48-MTA1(656-686) complex
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-04-14
Authors: Murthy, A., Lejon, S., Alqarni, S.S.M., Silva, A.P.G., Watson, A.A., Mackay, J.P., Laue, E.D.
PDB entry 4pbz: Structure of the human RbAp48-MTA1(670-695) complex
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2014-04-14
Authors: Murthy, A., Pei, X.Y., Watson, A.A., Silva, A.P.G., Mackay, J.P., Laue, E.D.
PDB entry 4pc0: Structure of the human RbAp48-MTA1(670-711) complex
Classification: CELL CYCLE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-04-14
Authors: Alqarni, S.S.M., Silva, A.P.G., Mackay, J.P., Laue, E.D.
PDB entry 4pc1: Elongation Factor Tu:Ts complex with a bound phosphate
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-04-14
Authors: Thirup, S.S.
PDB entry 4pc2: Elongation factor Tu:Ts complex with a bound GDP
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1999 Å
Deposited: 2014-04-14
Authors: Thirup, S.S.
PDB entry 4pc3: Elongation factor Tu:Ts complex with partially bound GDP
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8313 Å
Deposited: 2014-04-14
Authors: Thirup, S.S.
PDB entry 4pc4: Bombyx mori lipoprotein 6
Classification: LIPID BINDING PROTEIN
Source organism: Bombyx mori
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-04-14
Authors: Pietrzyk, A.J., Bujacz, A., Jaskolski, M., Bujacz, G.
PDB entry 4pc6: Elongation factor Tu:Ts complex with bound GDPNP
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-04-14
Authors: Thirup, S.S.
PDB entry 4pc7: Elongation factor Tu:Ts complex in a near GTP conformation.
Classification: TRANSLATION
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6003 Å
Deposited: 2014-04-14
Authors: Thirup, S.S.
PDB entry 4pc8: Structure-based protein engineering efforts on the scaffold of a monomeric triosephosphate isomerase yielding a sugar isomerase
Classification: ISOMERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2014-04-14
Authors: Krause, M., Neubauer, P., Wierenga, R.K.
PDB entry 4pc9: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSENBACTER DENITRIFICANS OCh 114 (RD1_1052, TARGET EFI-510238) WITH BOUND D-MANNONATE
Classification: SOLUTE-BINDING PROTEIN
Source organism: Roseobacter denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2014-04-14
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4pca: X-ray crystal structure of an O-methyltransferase from Anaplasma phagocytophilum bound to SAH and Manganese
Classification: TRANSFERASE
Source organism: Anaplasma phagocytophilum str. HGE1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-04-14
Authors: Fairman, J.W., Abendroth, J., Lorimer, D., Edwards, T.E., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4pcb: Conjugative Relaxase TrwC in complex with mutant OriT Dna
Classification: TRANSFERASE/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-04-14
Authors: Moncalian, G., Carballeira, J.D., de la Cruz, F., Gonzalez-Perez, B.
PDB entry 4pcd: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSEOBACTER DENITRIFICANS OCh 114 (RD1_1052, TARGET EFI-510238) WITH BOUND L-GALACTONATE
Classification: SOLUTE-BINDING PROTEIN
Source organism: Roseobacter denitrificans
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-04-15
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4pce: Crystal Structure of the first bromodomain of human BRD4 in complex with compound B13
Classification: Transcription/transcription Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.293 Å
Deposited: 2014-04-15
Authors: Dong, J., Caflisch, A.
PDB entry 4pcf: Structure-based protein engineering of a monomeric triosephosphate isomerase towards changing substrate specificity
Classification: ISOMERASE
Source organism: Trypanosoma brucei brucei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.71 Å
Deposited: 2014-04-15
Authors: Krause, M., Neubauer, P., Wierenga, R.K.
PDB entry 4pcg: Structure of Human Polyomavirus 6 (HPyV6) VP1 pentamer
Classification: VIRAL PROTEIN
Source organism: Polyomavirus HPyV6
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-04-15
Authors: Stroh, L.J., Stehle, T.
PDB entry 4pch: Structure of Human Polyomavirus 7 (HPyV7) VP1 pentamer
Classification: VIRAL PROTEIN
Source organism: Polyomavirus HPyV7
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-04-15
Authors: Stroh, L.J., Stehle, T.
PDB entry 4pci: Crystal Structure of the first bromodomain of BRD4 in complex with B16
Classification: Transcription/transcription Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.25 Å
Deposited: 2014-04-15
Authors: Dong, J., Caflisch, A.
PDB entry 4pcj: Modifications to toxic CUG RNAs induce structural stability and rescue mis-splicing in Myotonic Dystrophy
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-04-15
Authors: Coonrod, L.A., Reister, E.E., Berglund, J.A.
PDB entry 4pck: Crystal structure of the P22S mutant of N-terminal CS domain of human Shq1
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.401 Å
Deposited: 2014-04-15
Authors: Singh, M., Wang, Z., Cascio, D., Feigon, J.
PDB entry 4pcl: X-ray crystal structure of an O-methyltransferase from Anaplasma phagocytophilum bound to SAM and a Manganese ion.
Classification: TRANSFERASE
Source organism: Anaplasma phagocytophilum str. HGE1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-04-15
Authors: Fairman, J.W., Edwards, T.E., Lorimer, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 4pcn: Phosphotriesterase variant R22
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2014-04-16
Authors: Jackson, C.J., Campbell, E., Kaltenbach, M., Tokuriki, N.
PDB entry 4pco: Crystal structure of double-stranded RNA with four terminal GU wobble base pairs
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2014-04-15
Authors: Mooers, B.H.M.
PDB entry 4pcp: Crystal structure of Phosphotriesterase variant R0
Classification: HYDROLASE
Source organism: Brevundimonas diminuta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2014-04-16
Authors: Campbell, E., Kaltenbach, M., Tokuriki, N., Jackson, C.J.
PDB entry 4pcq: Crystal Structure of MtbAldR (Rv2779c)
Classification: TRANSCRIPTION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.95 Å
Deposited: 2014-04-16
Authors: Dey, A., Ramachandran, R.
PDB entry 4pcr: Crystal structure of Canavalia brasiliensis seed lectin (ConBr) complexed with Gamma-Aminobutyric Acid (GABA)
Classification: SUGAR BINDING PROTEIN
Source organism: Canavalia brasiliensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2014-04-16
Authors: Delatorre, P., Rocha, B.A.M., Silva-Filho, J.C., Teixeira, C.S., Cavada, B.S., Nascimento, K.S., Nbrega, R.B., Nagano, C.S., Sampaio, A.H., Leal, R.B., Neto, I.L.B.
PDB entry 4pcs: Crystal structure of a bacterial fucosidase with iminosugar (2S,3S,4R,5S)-3,4-dihydroxy-2-[2'-phenyl]ethynyl-5-methylpyrrolidine
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2014-04-16
Authors: Davies, G.J., Wright, D.W., Behr, J.B.
PDB entry 4pct: Crystal structure of a bacterial fucosidase with iminocyclitol (2S,3S,4R,5S)-3,4-dihydroxy-2-ethynyl-5-methylpyrrolidine
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-04-16
Authors: Wright, D.W., Davies, G.J.
PDB entry 4pcu: Crystal structure of delta516-525 E201S human cystathionine beta-synthase with AdoMet
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.578 Å
Deposited: 2014-04-16
Authors: Ereno-Orbea, J., Majtan, T., Oyenarte, I., Kraus, J.P., Martinez-Cruz, L.A.
PDB entry 4pcv: The structure of BdcA (YjgI) from E. coli
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli P0299438.9
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2014-04-16
Authors: Page, R., Peti, W., Lord, D.
PDB entry 4pcw: Crystal Structure of the N-terminal Domain of Human Profilaggrin at 2.2 A Resolution
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2014-04-16
Authors: Bunick, C.G., Steitz, T.A.
PDB entry 4pcy: CRYSTAL STRUCTURE ANALYSES OF REDUCED (CUI) POPLAR PLASTOCYANIN AT SIX PH VALUES
Classification: ELECTRON TRANSPORT PROTEIN(CUPROPROTEIN)
Source organism: Populus nigra
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 1986-09-02
Authors: Guss, J.M., Freeman, H.C.
PDB entry 4pcz: Crystal structure of a complex between R247G LlFPG mutant and a THF containing DNA
Classification: Hydrolase/DNA
Source organism: Lactococcus lactis subsp. cremoris; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-04-17
Authors: Coste, F., Castaing, B.
PDB entry 4pd0: 1.7 A resolution structure of gephyrin's E-domain
Classification: Biosynthetic Protein,Structural Protein
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-04-17
Authors: Kasaragod, V.B., Maric, H.M., Schindelin, H.
PDB entry 4pd1: Structure of gephyrin E domain with Glycine-beta receptor peptide
Classification: STRUCTURAL PROTEIN/TRANSPORT PROTEIN
Source organism: Rattus norvegicus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.975 Å
Deposited: 2014-04-17
Authors: Kasaragod, V.B., Maric, H.M., Schindelin, H.
PDB entry 4pd2: Crystal structure of a complex between a C248GH LlFpg mutant and a THF containing DNA
Classification: Hydrolase/DNA
Source organism: Lactococcus lactis subsp. cremoris; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2014-04-17
Authors: Coste, F., Castaing, B.
PDB entry 4pd3: Crystal Structure of Rigor-Like Human Nonmuscle Myosin-2B
Classification: CONTRACTILE PROTEIN
Source organism: Dictyostelium discoideum; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2014-04-17
Authors: Munnich, S., Pathan-Chhatbar, S., Manstein, D.J.
PDB entry 4pd4: Structural analysis of atovaquone-inhibited cytochrome bc1 complex reveals the molecular basis of antimalarial drug action
Classification: OXIDOREDUCTASE/INHIBITOR
Source organism: Mus musculus; Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.04 Å
Deposited: 2014-04-17
Authors: Birth, D., Kao, W.-C., Hunte, C.
PDB entry 4pd5: Crystal structure of vcCNT-7C8C bound to gemcitabine
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.906 Å
Deposited: 2014-04-17
Authors: Johnson, Z.L., Lee, S.-Y.
PDB entry 4pd6: Crystal structure of vcCNT-7C8C bound to uridine
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2014-04-17
Authors: Johnson, Z.L., Lee, S.-Y.
PDB entry 4pd7: Structure of vcCNT bound to zebularine
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.909 Å
Deposited: 2014-04-17
Authors: Johnson, Z.L., Lee, S.-Y.
PDB entry 4pd8: Structure of vcCNT-7C8C bound to pyrrolo-cytidine
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2014-04-17
Authors: Johnson, Z.L., Lee, S.-Y.
PDB entry 4pd9: Structure of vcCNT-7C8C bound to adenosine
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 3.096 Å
Deposited: 2014-04-17
Authors: Johnson, Z.L., Lee, S.-Y.
PDB entry 4pda: Structure of vcCNT-7C8C bound to cytidine
Classification: TRANSPORT PROTEIN
Source organism: Vibrio cholerae serotype O1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.608 Å
Deposited: 2014-04-17
Authors: Johnson, Z.L., Lee, S.-Y.
PDB entry 4pdb: CRYSTAL STRUCTURE OF BACILLUS ANTHRACIS RIBOSOMAL PROTEIN S8 IN COMPLEX WITH AN RNA APTAMER
Classification: RIBOSOMAL PROTEIN/RNA
Source organism: Bacillus anthracis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2014-04-17
Authors: Davlieva, M., Shamoo, Y., Nikonowicz, E.P.
PDB entry 4pdc: Crystal structure of Cowpox virus CPXV018 (OMCP) bound to human NKG2D
Classification: IMMUNE SYSTEM/VIRAL PROTEIN
Source organism: Cowpox virus; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.991 Å
Deposited: 2014-04-17
Authors: Lazear, E., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)
PDB entry 4pdd: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM POLAROMONAS SP JS666 (Bpro_0088, TARGET EFI-510167) BOUND TO D-ERYTHRONATE
Classification: SOLUTE-BINDING PROTEIN
Source organism: Polaromonas sp. JS666
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-04-18
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4pde: Crystal structure of FdhD in complex with GDP
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-04-18
Authors: Arnoux, P., Walburger, A., Magalon, A., Pignol, D.
PDB entry 4pdg: Crystal structure of a complex between an inhibited LlFpg and a THF containing DNA
Classification: Hydrolase/DNA
Source organism: Lactococcus lactis subsp. cremoris; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2014-04-18
Authors: Coste, F., Castaing, B.
PDB entry 4pdh: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM POLAROMONAS SP JS666 (Bpro_1871, TARGET EFI-510164) BOUND TO D-ERYTHRONATE
Classification: SOLUTE-BINDING PROTEIN
Source organism: Polaromonas sp. JS666
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2014-04-18
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4pdi: Crystal structure of a complex between an inhibited LlFpg and a N7-Benzyl-Fapy-dG containing DNA
Classification: Hydrolase/DNA
Source organism: Lactococcus lactis subsp. cremoris; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-04-18
Authors: Coste, F., Castaing, B.
PDB entry 4pdj: Neutron crystal Structure of E.coli Dihydrofolate Reductase complexed with folate and NADP+
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION, NEUTRON DIFFRACTION
Deposited: 2014-04-18
Authors: Wan, Q., Kovalevsky, A.Y., Wilson, M., Langan, P., Dealwis, C., Bennett, B.
PDB entry 4pdk: FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae, in Complex with oleoyl-CoA
Classification: TRANSCRIPTION
Source organism: Vibrio cholerae serotype O1 (ATCC 39315 / El Tor Inaba N16961)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-04-19
Authors: Shi, W., Kull, F.J.
PDB entry 4pdl: Structure of K+ selective NaK mutant in caesium
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2014-04-19
Authors: Lam, Y., Zeng, W., Sauer, D.B., Jiang, Y.
PDB entry 4pdm: Crystal Structure of K+ selective NaK mutant in rubidium
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.58 Å
Deposited: 2014-04-19
Authors: Lam, Y.
PDB entry 4pdn: Crystal structure of E. coli YfcM
Classification: OXIDOREDUCTASE
Source organism: Escherichia coli KTE5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.448 Å
Deposited: 2014-04-19
Authors: Kobayashi, K., Ishii, R., Ishitani, R., Nureki, O.
PDB entry 4pdo: Structure of Ephrin type-A receptor 2
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.104 Å
Deposited: 2014-04-19
Authors: Jimin, Z., Qiang, W., Zongchao, J.
PDB entry 4pdp: Crystal structure of Rad53 kinase domain and SCD2
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.591 Å
Deposited: 2014-04-19
Authors: Wybenga-Groot, L.E., Ho, C.S., Ceccarelli, D.F., Sicheri, F.
PDB entry 4pdq: Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neomycin analog
Classification: RNA/ANTIBIOTIC
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2014-04-21
Authors: Hanessian, S., Saavedra, O.M., Vilchis-Reyes, M.A., Maianti, J.P., Kanazawa, H., Dozzo, P., Feeney, L.A., Armstrong, E.S., Kondo, J.
PDB entry 4pdr: Crystal Structure of a K+ selective NaK mutant in Barium and Sodium
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-04-21
Authors: Lam, Y., Zeng, W., Sauer, D.B., Jiang, Y.
PDB entry 4pds: Crystal structure of Rad53 kinase domain and SCD2 in complex with AMPPNP
Classification: TRANSFERASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2014-04-21
Authors: Ho, C.S., Wybenga-Groot, L.E., Ceccarelli, D.F., Sicheri, F.
PDB entry 4pdt: Japanese Marasmius oreades lectin
Classification: SUGAR BINDING PROTEIN
Source organism: Marasmius oreades
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2014-04-22
Authors: Noma, Y., Shimokawa, M., Maeganeku, C., Motoshima, H., Watanabe, K., Minami, Y., Yagi, F.
PDB entry 4pdv: Structure of K+ selective NaK mutant in barium and potassium
Classification: TRANSPORT PROTEIN
Source organism: Bacillus cereus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.821 Å
Deposited: 2014-04-22
Authors: Lam, Y., Zeng, W., Sauer, D.B., Jiang, Y.
PDB entry 4pdw: A benzonitrile analogue inhibits rhinovirus replication
Classification: VIRUS
Source organism: Human rhinovirus 14; Rhinovirus B
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2014-04-22
Authors: Querol-Audi, J., Guerra, P., Lacroix, C., Roche, M., Franco, D., Froeyen, M., Terme, T., Vanelle, P., Neyts, J., Leyssen, P., Verdaguer, N.
PDB entry 4pdx: Crystal structure of Escherchia coli uncharacterized protein YjcS
Classification: HYDROLASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-04-22
Authors: Liang, Y.J., Gao, Z.Q., Liu, Q.S., Dong, Y.H.
PDB entry 4pdy: Crystal structure of aminoglycoside phosphotransferase from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Classification: TRANSFERASE
Source organism: Alicyclobacillus acidocaldarius subsp. acidocaldarius
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2014-04-22
Authors: Chang, C., Li, H., Bearden, J., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4pdz: Crystal Structure of Calcium-loaded S100B bound to SBi4172
Classification: METAL BINDING PROTEIN/INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2014-04-22
Authors: Cavalier, M.C., Pierce, A.D., Wilder, P.T., Neau, D., Toth, E.A., Weber, D.J.
PDB entry 4pe0: Crystal Structure of Calcium-loaded S100B bound to SBi4434
Classification: METAL BINDING PROTEIN/INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.08 Å
Deposited: 2014-04-22
Authors: Cavalier, M.C., Pierce, P.D., Wilder, P.T., Neau, D., Toth, E.A., Weber, D.J.
PDB entry 4pe1: Crystal Structure of Calcium-loaded S100B bound to SC124
Classification: METAL BINDING PROTEIN/INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.576 Å
Deposited: 2014-04-22
Authors: Cavalier, M.C., Pierce, A.D., Wilder, P.T., Neau, D., Toth, E.A., Weber, D.J.
PDB entry 4pe2: MBP PilA1 CD160
Classification: CELL ADHESION
Source organism: Clostridium difficile CD160; Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 1.724 Å
Deposited: 2014-04-22
Authors: Piepenbrink, K.H., Sundberg, E.J.
PDB entry 4pe3: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RHODOBACTER SPHAEROIDES (Rsph17029_3620, TARGET EFI-510199), APO OPEN STRUCTURE
Classification: SOLUTE-BINDING PROTEIN
Source organism: Rhodobacter sphaeroides
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2014-04-22
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4pe4: Crystal Structure of Calcium-loaded S100B bound to SC1475
Classification: METAL BINDING PROTEIN/INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.178 Å
Deposited: 2014-04-22
Authors: Cavalier, M.C., Pierce, A.D., Wilder, P.T., Neau, D., Toth, E.A., Weber, D.J.
PDB entry 4pe5: Crystal Structure of GluN1a/GluN2B NMDA Receptor Ion Channel
Classification: TRANSPORT PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.96 Å
Deposited: 2014-04-22
Authors: Karakas, E., Furukawa, H.
PDB entry 4pe6: Crystal structure of ABC transporter solute binding protein from Thermobispora bispora DSM 43833
Classification: SOLUTE-BINDING PROTEIN
Source organism: Thermobispora bispora
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2014-04-22
Authors: Chang, C., Li, H., Endres, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4pe7: Crystal Structure of Calcium-loaded S100B bound to SC1982
Classification: METAL BINDING PROTEIN/INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.652 Å
Deposited: 2014-04-22
Authors: Cavalier, M.C., Pierce, A.D., Wilder, P.T., Neau, D., Toth, E.A., Weber, D.J.
PDB entry 4pe8: Crystal structure of TatD in complex with trinucleotide DNA
Classification: HYDROLASE/DNA
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.894 Å
Deposited: 2014-04-23
Authors: Chen, Y., Li, C.-L., Hsiao, Y.-Y., Duh, Y., Yuan, H.S.
PDB entry 4ped: Mitochondrial ADCK3 employs an atypical protein kinase-like fold to enable coenzyme Q biosynthes
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2014-04-22
Authors: Bingman, C.A., Smith, R., Joshi, S., Stefely, J.A., Reidenbach, A.G., Ulbrich, A., Oruganty, O., Floyd, B.J., Jochem, A., Saunders, J.M., Johnson, I.E., Wrobel, R.L., Barber, G.E., Lee, D., Li, S., Kannan, N., Coon, J.J., Pagliarini, D.J., Mitochondrial Protein Partnership (MPP)
PDB entry 4pee: Crystal structure of a bacterial fucosidase with inhibitor 1-phenyl-4-[(2S,3S,4R,5S)-3,4-dihydroxy-5-methylpyrrolidin-2-yl]triazole
Classification: HYDROLASE
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-04-23
Authors: Wright, D.W., Davies, G.J., Behr, J.B.
PDB entry 4pef: Dbr1 in complex with sulfate
Classification: HYDROLASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.96 Å
Deposited: 2014-04-23
Authors: Montemayor, E.J., Katolik, A., Clark, N.E., Taylor, A.B., Schuermann, J.P., Combs, D.J., Johnsson, R., Holloway, S.P., Stevens, S.W., Damha, M.J., Hart, P.J.
PDB entry 4peg: Dbr1 in complex with guanosine-5'-monophosphate
Classification: HYDROLASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2014-04-23
Authors: Montemayor, E.J., Katolik, A., Clark, N.E., Taylor, A.B., Schuermann, J.P., Combs, D.J., Johnsson, R., Holloway, S.P., Stevens, S.W., Damha, M.J., Hart, P.J.
PDB entry 4peh: Dbr1 in complex with synthetic linear RNA
Classification: HYDROLASE/RNA
Source organism: Entamoeba histolytica; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-04-23
Authors: Montemayor, E.J., Katolik, A., Clark, N.E., Taylor, A.B., Schuermann, J.P., Combs, D.J., Johnsson, R., Holloway, S.P., Stevens, S.W., Damha, M.J., Hart, P.J.
PDB entry 4pei: Dbr1 in complex with synthetic branched RNA analog
Classification: HYDROLASE/RNA
Source organism: Entamoeba histolytica; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2014-04-23
Authors: Montemayor, E.J., Katolik, A., Clark, N.E., Taylor, A.B., Schuermann, J.P., Combs, D.J., Johnsson, R., Holloway, S.P., Stevens, S.W., Damha, M.J., Hart, P.J.
PDB entry 4pej: Crystal structure of a computationally designed retro-aldolase, RA110.4 (Cys free)
Classification: LYASE
Source organism: ARTIFICIAL GENE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2014-04-23
Authors: Bhabha, G., Zhang, X., Liu, Y., Ekiert, D.C.
PDB entry 4pek: Crystal structure of a computationally designed retro-aldolase, RA114.3
Classification: LYASE
Source organism: ARTIFICIAL GENE
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2014-04-23
Authors: Bhabha, G., Zhang, X., Liu, Y., Ekiert, D.C.
PDB entry 4pel: S1C mutant of Penicillin G acylase from Kluyvera citrophila
Classification: HYDROLASE
Source organism: Kluyvera cryocrescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2014-04-24
Authors: Ramasamy, S., Chand, D., Varshney, N.K., Brannigan, J.A., Wilkinson, A.J., Suresh, C.G.
PDB entry 4pem: Crystal Structure of S1G mutant of Penicillin G Acylase from Kluyvera citrophila
Classification: HYDROLASE
Source organism: Kluyvera cryocrescens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2014-04-24
Authors: Ramasamy, S., Varshney, N.K., Brannigan, J.A., Wilkinson, A.J., Suresh, C.G.
PDB entry 4peo: Crystal structure of a hypothetical protein from Staphylococcus aureus.
Classification: UNKNOWN FUNCTION
Source organism: Staphylococcus aureus subsp. aureus Mu50
Experimental method: X-RAY DIFFRACTION
Resolution: 1.73 Å
Deposited: 2014-04-24
Authors: McGrath, T.E., Kisselman, G., Romanov, V., Wu-Brown, J., Soloveychik, M., Chan, T.S.Y., Gordon, R.D., Thambipillai, D., Dharamsi, A., Mansoury, K., Battaile, K.P., Edwards, A.M., Pai, E.F., Chirgadze, N.Y.
PDB entry 4pep: THE MOLECULAR AND CRYSTAL STRUCTURES OF MONOCLINIC PORCINE PEPSIN REFINED AT 1.8 ANGSTROMS RESOLUTION
Classification: HYDROLASE (ACID PROTEINASE)
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 1989-12-18
Authors: Andreeva, N., Fedorov, A.A., Sielecki, A., James, M.
PDB entry 4peq: Structure of bovine ribonuclease inhibitor complexed with bovine ribonuclease I
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.211 Å
Deposited: 2014-04-24
Authors: Bianchetti, C.M., Lomax, J.E., Raines, R.T., Fox, B.G.
PDB entry 4per: Structure of Gallus gallus ribonuclease inhibitor complexed with Gallus gallus ribonuclease I
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2014-04-24
Authors: Bianchetti, C.M., Lomax, J.E., Raines, R.T., Fox, B.G.
PDB entry 4pes: Crystal structure of insulin degrading enzyme complexed with inhibitor tert-butyl [(2S)-2-(2,5-difluorophenyl)-3-(quinolin-3-yl)propyl]carbamate
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2014-04-24
Authors: Wang, Y., Guo, S.
PDB entry 4pet: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM COLWELLIA PSYCHRERYTHRAEA (CPS_0129, TARGET EFI-510097) WITH BOUND CALCIUM AND PYRUVATE
Classification: SOLUTE-BINDING PROTEIN
Source organism: Colwellia psychrerythraea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-04-24
Authors: Vetting, M.W., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Stead, M., Attonito, J.D., Scott Glenn, A., Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)
PDB entry 4peu: Structure of the polysaccharide lyase-like protein Cthe_2159 from C. thermocellum, native form with Calcium bound
Classification: UNKNOWN FUNCTION
Source organism: Clostridium thermocellum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8001 Å
Deposited: 2014-04-24
Authors: Close, D.W., D'Angelo, S., Bradbury, A.R.M.
PDB entry 4pev: Crystal structure of ABC transporter system solute-binding proteins from Aeropyrum pernix K1
Classification: SOLUTE-BINDING PROTEIN
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 2.58 Å
Deposited: 2014-04-25
Authors: Chang, C., Li, H., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4pew: Structure of sacteLam55A from Streptomyces sp. SirexAA-E
Classification: HYDROLASE
Source organism: Streptomyces sp. SirexAA-E
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2014-04-25
Authors: Bianchetti, C.M., Takasuka, T.E., Bergeman, L.F., Fox, B.G.
PDB entry 4pex: Structure of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with glucose
Classification: HYDROLASE
Source organism: Streptomyces sp. SirexAA-E
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-04-25
Authors: Bianchetti, C.M., Takasuka, T.E., Yik, E.J., Bergeman, L.F., Fox, B.G.
PDB entry 4pey: Structure of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminaritriose
Classification: HYDROLASE
Source organism: Streptomyces sp. SirexAA-E
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2014-04-25
Authors: Bianchetti, C.M., Takasuka, T.E., Yik, E.J., Bergeman, L.F., Fox, B.G.
PDB entry 4pez: Structure of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminaritetraose
Classification: HYDROLASE
Source organism: Streptomyces sp. SirexAA-E
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2014-04-25
Authors: Bianchetti, C.M., Takasuka, T.E., Yik, E.J., Bergeman, L.F., Fox, B.G.
PDB entry 4pf0: Structure of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminarihexaose
Classification: HYDROLASE
Source organism: Streptomyces sp. SirexAA-E
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2014-04-25
Authors: Bianchetti, C.M., Takasuka, T.E., Yik, E.J., Bergeman, L.F., Fox, B.G.
PDB entry 4pf1: Crystal structure of aminopeptidase from marine sediment archaeon Thaumarchaeota archaeon
Classification: HYDROLASE
Source organism: Thaumarchaeota archaeon SCGC AB-539-E09
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2014-04-25
Authors: Michalska, K., Chhor, G., Fayman, K., Endres, M., Jedrzejczak, R., Babnigg, G., Steen, A., Lloyd, K., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 4pf3: Mineralocorticoid receptor ligand-binding domain with compuond 37a
Classification: TRANSCRIPTION/TRANSCRIPTION INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2014-04-28
Authors: Sogabe, S., Habuka, N.