LiteFold/PDB huggingface dataset:
PDB entry 8h07: SARS-CoV-2 BA.4 variants S ectodomain trimer in complex with neutralizing antibody 10-5B and 6-2C
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-09-28
Authors: Wang, X., Wang, Z.
PDB entry 8h08: SARS-CoV-2 BA.1 variants S ectodomain trimer in complex with neutralizing antibody 10-5B and 6-2C
Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-09-28
Authors: Wang, X., Wang, Z.
PDB entry 8h09: Structure of the thermolabile hemolysin from Vibrio alginolyticus (apo form)
Classification: HYDROLASE
Source organism: Vibrio alginolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2022-09-28
Authors: Ma, Q., Wang, C.
PDB entry 8h0a: Structure of the thermolabile hemolysin from Vibrio alginolyticus (in complex with lauric acid)
Classification: HYDROLASE
Source organism: Vibrio alginolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2022-09-28
Authors: Ma, Q., Wang, C.
PDB entry 8h0b: Structure of the thermolabile hemolysin from Vibrio alginolyticus (in complex with oleic acid)
Classification: HYDROLASE
Source organism: Vibrio alginolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.931 Å
Deposited: 2022-09-28
Authors: Ma, Q., Wang, C.
PDB entry 8h0c: Structure of the thermolabile hemolysin from Vibrio alginolyticus (in complex with arachidonic acid)
Classification: HYDROLASE
Source organism: Vibrio alginolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2022-09-28
Authors: Ma, Q., Wang, C.
PDB entry 8h0d: Structure of the thermolabile hemolysin from Vibrio alginolyticus (in complex with docosahexaenoic acid)
Classification: HYDROLASE
Source organism: Vibrio alginolyticus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2022-09-28
Authors: Ma, Q., Wang, C.
PDB entry 8h0e: Crystal structure of collagen heterotrimer with KD, ER and KE axial pairs
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.76 Å
Deposited: 2022-09-28
Authors: Fan, S.
PDB entry 8h0f: Crystal structure of collagen heterotrimer with KD,ER and KE axial pairs
Classification: STRUCTURAL PROTEIN
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2022-09-28
Authors: Fan, S.
PDB entry 8h0g: AQEE-30 in a HFIP solution
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-09-28
Authors: Park, O.-S., Jeon, Y.H., Cheong, C.
PDB entry 8h0h: Hypotethical protein from Mycobacterium tuberculsosis
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.74 Å
Deposited: 2022-09-29
Authors: Kim, D.H., Na, Y., Lee, B.J.
PDB entry 8h0i: Cryo-EM structure of APOBEC3G-Vif complex
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; Human immunodeficiency virus 1; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-09-29
Authors: Kouno, T., Shibata, S., Hyun, J., Kim, T.G., Wolf, M.
PDB entry 8h0j: Annexin A5 mutant
Classification: LIPID BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2022-09-29
Authors: Hua, Z.C., Tang, W.
PDB entry 8h0l: Sulfur binding domain of Hga complexed with phosphorothioated DNA
Classification: DNA BINDING PROTEIN/DNA
Source organism: Hahella ganghwensis; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-09-29
Authors: Liu, G., He, X., Hu, W., Yang, B., Xiao, Q.
PDB entry 8h0m: Crystal structure of VioD
Classification: FLAVOPROTEIN
Source organism: Duganella sp. ZLP-XI
Experimental method: X-RAY DIFFRACTION
Resolution: 1.702 Å
Deposited: 2022-09-29
Authors: Xu, M., Ran, T., Wang, W.
PDB entry 8h0n: Crystal structure of the human METTL1-WDR4 complex
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-09-30
Authors: Jin, X.H., Guan, Z.Y., Gong, Z., Zhang, D.L.
PDB entry 8h0o: Crystal structure of human serum albumin and ruthenium PZA complex adduct
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.479 Å
Deposited: 2022-09-30
Authors: Gong, W.J., Wang, Y., Bai, H.H., Wang, W.M., Wang, H.F.
PDB entry 8h0p: Structure of the NMB30-NMBR and Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2022-09-30
Authors: Li, C., Xu, Y., Liu, H., Cai, H., Xu, H.E., Yin, W.
PDB entry 8h0q: Structure of the GRP14-27-GRPR-Gq complex
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-09-30
Authors: Li, C., Xu, Y., Liu, H., Cai, H., Xu, H.E., Yin, W.
PDB entry 8h0r: Crystal structure of a cataract-causing crystallin mutant (mouse CRYBB1 Y202X)
Classification: STRUCTURAL PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.201 Å
Deposited: 2022-09-30
Authors: Jing, X., Gong, P.
PDB entry 8h0s: Crystal structure of MnmM from B. subtilis complexed with Gln-TTG anti-codon stem loop and SAM (2.90 A)
Classification: TRANSFERASE/RNA
Source organism: Bacillus subtilis subsp. subtilis str. 168; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-09-30
Authors: Kim, J., Lee, J., Cho, G.
PDB entry 8h0t: Crystal structure of MnmM from B. subtilis complexed with SAH (1.17 A)
Classification: TRANSFERASE
Source organism: Bacillus subtilis subsp. subtilis str. 168
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2022-09-30
Authors: Kim, J., Lee, J., Cho, G.
PDB entry 8h0u: AQEE-30 in a DPC solution
Classification: NEUROPEPTIDE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-09-30
Authors: Park, O.-S., Jeon, Y.H., Cheong, C.
PDB entry 8h0v: RNA polymerase II transcribing a chromatosome (type I)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-09-30
Authors: Hirano, R., Ehara, H., Tomoya, K., Takizawa, Y., Sekine, S., Kurumizaka, H.
PDB entry 8h0w: RNA polymerase II transcribing a chromatosome (type II)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; Komagataella phaffii; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-09-30
Authors: Hirano, R., Ehara, H., Tomoya, K., Takizawa, Y., Sekine, S., Kurumizaka, H.
PDB entry 8h0x: Structure of SARS-CoV-1 Spike Protein with Engineered x1 Disulfide (S370C and D967C), Locked-1 Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.57 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h0y: Structure of SARS-CoV-1 Spike Protein with Engineered x1 Disulfide (S370C and D967C), Locked-112 Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.85 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h0z: Structure of SARS-CoV-1 Spike Protein with Engineered x1 Disulfide (S370C and D967C), Locked-122 Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h10: Structure of SARS-CoV-1 Spike Protein with Engineered x1 Disulfide (S370C and D967C), Locked-2 Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.99 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h11: Structure of SARS-CoV-1 Spike Protein with Engineered x1 Disulfide (S370C and D967C), Closed Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.72 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h12: Structure of SARS-CoV-1 Spike Protein with Engineered x2 Disulfide (G400C and V969C), Locked-2 Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.44681 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h13: Structure of SARS-CoV-1 Spike Protein with Engineered x2 Disulfide (G400C and V969C), Closed Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.05 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h14: Structure of SARS-CoV-1 Spike Protein with Engineered x3 Disulfide (D414C and V969C), Locked-1 Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h15: Structure of SARS-CoV-1 Spike Protein (S/native) at pH 5.5, Closed Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.14182 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h16: Structure of SARS-CoV-1 Spike Protein (S/native) at pH 5.5, Open Conformation
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.35534 Å
Deposited: 2022-09-30
Authors: Zhang, X., Li, Z., Liu, Y., Wang, J., Fu, L., Wang, P., He, J., Xiong, X.
PDB entry 8h17: Crystal structure of the Globin domain of Thermosynechococcus elongatus BP-1
Classification: OXYGEN BINDING
Source organism: Thermosynechococcus vestitus BP-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-09-30
Authors: Mathur, S., Yadav, S.K., Pal, K.R., Kundu, S.
PDB entry 8h18: Crystal structure of DnaQ domain of Streptococcus thermophilus strain DGCC 7710
Classification: LYASE
Source organism: Streptococcus thermophilus DGCC 7710
Experimental method: X-RAY DIFFRACTION
Resolution: 1.499 Å
Deposited: 2022-10-01
Authors: Chen, Q., Yu, Y.
PDB entry 8h1a: Crystal structure of MnmM from S. aureus in apo state (1.44 A)
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: X-RAY DIFFRACTION
Resolution: 1.44 Å
Deposited: 2022-10-01
Authors: Kim, J., Cho, G., Lee, J.
PDB entry 8h1b: Crystal structure of MnmM from S. aureus complexed with SAM and tRNA anti-codon stem loop (ASL) (1.55 A)
Classification: TRANSFERASE/RNA
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-10-01
Authors: Kim, J., Cho, G., Lee, J.
PDB entry 8h1c: Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase in complex with two tRNAs (one in tRNA binding state and the other in tRNA locked state)
Classification: LIGASE/RNA
Source organism: Oryza sativa; Oryza sativa Japonica Group
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-10-02
Authors: Yu, Z., Wu, Z., Li, Y., Lu, G., Lin, J.
PDB entry 8h1d: Solid-state NMR Structure of Aquaporin Z in its Native Cellular Membranes
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli BL21(DE3)
Experimental method: SOLID-STATE NMR
Deposited: 2022-10-02
Authors: Xie, H., Zhao, Y., Zhao, W., Chen, Y., Liu, M., Yang, J.
PDB entry 8h1e: Aquifex aeolicus MutL endonuclease domain complexed with manganese ions
Classification: DNA BINDING PROTEIN
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2022-10-03
Authors: Fukui, K., Yano, T.
PDB entry 8h1f: Aquifex aeolicus MutL endonuclease domain complexed with zinc ions after soaking
Classification: DNA BINDING PROTEIN
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.22 Å
Deposited: 2022-10-03
Authors: Fukui, K., Yano, T.
PDB entry 8h1g: The R406T mutant form of the Aquifex aeolicus MutL endonuclease domain
Classification: DNA BINDING PROTEIN
Source organism: Aquifex aeolicus VF5
Experimental method: X-RAY DIFFRACTION
Resolution: 1.43 Å
Deposited: 2022-10-03
Authors: Fukui, K., Yano, T.
PDB entry 8h1i: Crystal structure of PlyGRCS, a bacteriophage Endolysin in complex with Cold shock protein C
Classification: ANTIMICROBIAL PROTEIN
Source organism: Escherichia coli K-12; Staphylococcus phage GRCS
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-10-03
Authors: Padmanabhan, B., Gopinatha, K., Mandal, M., Saranya, G., Sudhagar, B.
PDB entry 8h1j: Cryo-EM structure of the TnpB-omegaRNA-target DNA ternary complex
Classification: RNA BINDING PROTEIN
Source organism: Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-03
Authors: Nakagawa, R., Hirano, H., Omura, S., Nureki, O.
PDB entry 8h1k: Crystal structure of glucose-2-epimerase from Runella slithyformis Runsl_4512
Classification: ISOMERASE
Source organism: Runella slithyformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-03
Authors: Wang, H., Sun, X.M., Saburi, W., Yu, J., Yao, M.
PDB entry 8h1l: Crystal structure of glucose-2-epimerase in complex with D-Glucitol from Runella slithyformis Runsl_4512
Classification: ISOMERASE
Source organism: Runella slithyformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2022-10-03
Authors: Wang, H., Sun, X.M., Saburi, W., Yu, J., Yao, M.
PDB entry 8h1m: Crystal structure of glucose-2-epimerase mutant_D254A from Runella slithyformis Runsl_4512
Classification: ISOMERASE
Source organism: Runella slithyformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-03
Authors: Wang, H., Sun, X.M., Saburi, W., Yu, J., Yao, M.
PDB entry 8h1n: Crystal structure of glucose-2-epimerase mutant_D254A in complex with D-Glucitol from Runella slithyformis Runsl_4512
Classification: ISOMERASE
Source organism: Runella slithyformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2022-10-03
Authors: Wang, H., Sun, X.M., Saburi, W., Yu, J., Yao, M.
PDB entry 8h1o: Cryo-EM structure of KpFtsZ-monobody double helical tube
Classification: CELL CYCLE
Source organism: Homo sapiens; Klebsiella pneumoniae
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.67 Å
Deposited: 2022-10-03
Authors: Fujita, J., Amesaka, H., Yoshizawa, T., Kuroda, N., Kamimura, N., Hara, M., Inoue, T., Namba, K., Tanaka, S., Matsumura, H.
PDB entry 8h1p: Cryo-EM structure of the human RAD52 protein
Classification: RECOMBINATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å
Deposited: 2022-10-03
Authors: Kinoshita, C., Takizawa, Y., Saotome, M., Ogino, S., Kurumizaka, H., Kagawa, W.
PDB entry 8h1q: Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with L-serine
Classification: TRANSFERASE
Source organism: Sphingobacterium multivorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-10-03
Authors: Murakami, T., Takahashi, A., Katayama, A., Miyahara, I., Kamiya, N., Ikushiro, H., Yano, T.
PDB entry 8h1r: Crystal structure of LptDE-YifL complex
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli (strain K12); Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.98 Å
Deposited: 2022-10-03
Authors: Luo, Q., Huang, Y.
PDB entry 8h1s: Crystal structure of apo-LptDE complex
Classification: MEMBRANE PROTEIN
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.28 Å
Deposited: 2022-10-03
Authors: Luo, Q., Huang, Y.
PDB entry 8h1t: Cryo-EM structure of BAP1-ASXL1 bound to chromatosome
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-10-04
Authors: Ge, W., Yu, C., Xu, R.M.
PDB entry 8h1w: Serine Palmitoyltransferase from Sphingobacterium multivorum
Classification: TRANSFERASE
Source organism: Sphingobacterium multivorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-10-04
Authors: Takahashi, A., Murakami, T., Katayama, A., Miyahara, I., Kamiya, N., Ikushiro, H., Yano, T.
PDB entry 8h1y: Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with L-homoserine
Classification: TRANSFERASE
Source organism: Sphingobacterium multivorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-10-04
Authors: Murakami, T., Takahashi, A., Katayama, A., Miyahara, I., Kamiya, N., Ikushiro, H., Yano, T.
PDB entry 8h20: Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with Glycine
Classification: TRANSFERASE
Source organism: Sphingobacterium multivorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-10-04
Authors: Murakami, T., Takahashi, A., Katayama, A., Miyahara, I., Kamiya, N., Ikushiro, H., Yano, T.
PDB entry 8h21: Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with L-alanine
Classification: TRANSFERASE
Source organism: Sphingobacterium multivorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2022-10-04
Authors: Murakami, T., Takahashi, A., Katayama, A., Miyahara, I., Kamiya, N., Ikushiro, H., Yano, T.
PDB entry 8h24: Leucine-rich alpha-2-glycoprotein 1
Classification: UNKNOWN FUNCTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2022-10-04
Authors: Won, S.Y., Park, B.S., Lee, D.S., Kim, H.M., Han, A., Yang, J.
PDB entry 8h25: Lacticaseibacillus casei GH35 beta-galactosidase LBCZ_0230
Classification: HYDROLASE
Source organism: Lacticaseibacillus casei
Experimental method: X-RAY DIFFRACTION
Resolution: 2.295 Å
Deposited: 2022-10-04
Authors: Saburi, W., Ota, T., Kato, K., Tagami, T., Yamashita, K., Yao, M., Mori, H.
PDB entry 8h26: Crystal structure of MnmM from S. aureus complexed with SAH (1.50 A)
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-10-05
Authors: Kim, J., Cho, G., Lee, J.
PDB entry 8h27: Crystal structure of MnmM from S. aureus complexed with SAM (2.04 A)
Classification: TRANSFERASE
Source organism: Staphylococcus aureus subsp. aureus NCTC 8325
Experimental method: X-RAY DIFFRACTION
Resolution: 2.04 Å
Deposited: 2022-10-05
Authors: Kim, J., Cho, G., Lee, J.
PDB entry 8h28: Crystal structure of the K87V mutant of cytochrome c' from Shewanella benthica DB6705
Classification: ELECTRON TRANSPORT
Source organism: Shewanella sp. DB6705
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2022-10-05
Authors: Fujii, S., Sakaguchi, R., Oki, H., Kawahara, K., Ohkubo, T., Fujiyoshi, S., Sambongi, Y.
PDB entry 8h29: Serine Palmitoyltransferase from Sphingobacterium multivorum complexed with L-threonine
Classification: TRANSFERASE
Source organism: Sphingobacterium multivorum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-10-05
Authors: Murakami, T., Takahashi, A., Katayama, A., Miyahara, I., Kamiya, N., Ikushiro, H., Yano, T.
PDB entry 8h2a: Crystal structure of alcohol dehydrogenase from Formosa agariphila
Classification: OXIDOREDUCTASE
Source organism: Formosa agariphila
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-10-05
Authors: Brott, S., Bornscheuer, U.T., Nam, K.H.
PDB entry 8h2b: Crystal structure of alcohol dehydrogenase from Zobellia galactanivorans
Classification: OXIDOREDUCTASE
Source organism: Zobellia galactanivorans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-10-05
Authors: Brott, S., Bornscheuer, U.T., Nam, K.H.
PDB entry 8h2c: Crystal structure of the pseudaminic acid synthase PseI from Campylobacter jejuni
Classification: BIOSYNTHETIC PROTEIN
Source organism: Campylobacter jejuni
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-10-05
Authors: Song, W.S., Park, M.A., Ki, D.U., Yoon, S.I.
PDB entry 8h2d: The hypothetical protein from Mycobacterium tuberculosis mutant - E47A
Classification: HYDROLASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-10-05
Authors: Kim, D.H., Na, Y., Lee, B.J.
PDB entry 8h2f: Crystal structure of DnaQ domain in complex witn TMP of Streptococcus thermophilus strain DGCC 7710
Classification: LYASE
Source organism: Streptococcus thermophilus DGCC 7710
Experimental method: X-RAY DIFFRACTION
Resolution: 1.448 Å
Deposited: 2022-10-05
Authors: Chen, Q., Yu, Y.
PDB entry 8h2g: Cryo-EM structure of niacin bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2022-10-06
Authors: Park, J.H., Ishimoto, N., Park, S.Y.
PDB entry 8h2h: Cryo-EM structure of a Group II Intron Complexed with its Reverse Transcriptase
Classification: RNA  BINDING PROTEIN/RNA
Source organism: Lactococcus lactis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å
Deposited: 2022-10-06
Authors: Liu, N., Dong, X.L., Qu, G.S., Wang, J., Wang, H.W., Belfort, M.
PDB entry 8h2i: Near-atomic structure of five-fold averaged PBCV-1 capsid
Classification: VIRAL PROTEIN
Source organism: Paramecium bursaria Chlorella virus 1
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-10-06
Authors: Shao, Q., Agarkova, I.V., Noel, E.A., Dunigan, D.D., Liu, Y., Wang, A., Guo, M., Xie, L., Zhao, X., Rossmann, M.G., Van Etten, J.L., Klose, T., Fang, Q.
PDB entry 8h2j: Structure of Acb2 complexed with 3',3'-cGAMP
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PaP2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-10-06
Authors: Feng, Y., Cao, X.L.
PDB entry 8h2m: gp96 RNA polymerase from P23-45 phage (crystal 1)
Classification: TRANSCRIPTION
Source organism: Oshimavirus P2345
Experimental method: X-RAY DIFFRACTION
Resolution: 3.08 Å
Deposited: 2022-10-06
Authors: Chaban, A., Sokolova, M.L., Tagami, S.
PDB entry 8h2n: gp96 RNA polymerase from P23-45 phage (crystal 2)
Classification: TRANSCRIPTION
Source organism: Thermus virus P23-45
Experimental method: X-RAY DIFFRACTION
Resolution: 4.41 Å
Deposited: 2022-10-06
Authors: Chaban, A., Sokolova, M.L., Tagami, S.
PDB entry 8h2r: Escherichia Coli Heat Labile Enterotoxin Type IIB B-Pentamer Circular Permutant CP52-53
Classification: TOXIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-10-06
Authors: Hsu, S.H., Yuan, Y.T., Sue, S.C.
PDB entry 8h2t: Cryo-EM structure of IadD/E dioxygenase bound with IAA
Classification: FLAVOPROTEIN
Source organism: Variovorax paradoxus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.59 Å
Deposited: 2022-10-07
Authors: Yu, G., Li, Z., Zhang, H.
PDB entry 8h2u: X-ray Structure of photosystem I-LHCI super complex from Chlamydomonas reinhardtii.
Classification: PHOTOSYNTHESIS
Source organism: Chlamydomonas reinhardtii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å
Deposited: 2022-10-07
Authors: Tanaka, H., Kubota-Kawai, H., Misumi, Y., Kurisu, G.
PDB entry 8h2x: Structure of Acb2
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PaP2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.69 Å
Deposited: 2022-10-07
Authors: Feng, Y., Cao, X.L.
PDB entry 8h33: Cryo-EM Structure of the KBTBD2-Cul3-Rbx1 tetrameric complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.86 Å
Deposited: 2022-10-07
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h34: Cryo-EM Structure of the KBTBD2-Cul3-Rbx1 hexameric complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.99 Å
Deposited: 2022-10-07
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h35: Cryo-EM Structure of the KBTBD2-Cul3-Rbx1 octameric complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.41 Å
Deposited: 2022-10-08
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h36: Cryo-EM Structure of the KBTBD2-CUL3-Rbx1-p85a dimeric complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-10-08
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h37: Cryo-EM Structure of the KBTBD2-CUL3-Rbx1-p85a tetrameric complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.52 Å
Deposited: 2022-10-08
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h38: Cryo-EM Structure of the KBTBD2-CRL3~N8-CSN(mutate) complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.25 Å
Deposited: 2022-10-08
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h39: Structure of Acb2 complexed with c-di-AMP
Classification: VIRAL PROTEIN
Source organism: Pseudomonas phage PaP2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2022-10-08
Authors: Feng, Y., Cao, X.L.
PDB entry 8h3a: Cryo-EM Structure of the KBTBD2-CRL3~N8(removed)-CSN complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.51 Å
Deposited: 2022-10-08
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h3b: Crystal structure of antibody scFv against M2e Influenza peptide
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-10-08
Authors: Kumar, U., Madni, Z.K., Gaur, V., Salunke, D.M.
PDB entry 8h3c: Crystal structure of M2e Influenza peptide in complex with antibody scFv
Classification: ANTIVIRAL PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.43 Å
Deposited: 2022-10-08
Authors: Kumar, U., Madni, Z.K., Gaur, V., Salunke, D.M.
PDB entry 8h3d: Structure of apo SARS-CoV-2 spike protein with one RBD up
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.27 Å
Deposited: 2022-10-08
Authors: Meng, F., Wang, Q., Xie, Y., Ni, X., Huang, N.
PDB entry 8h3e: Complex structure of a small molecule (SPC-14) bound SARS-CoV-2 spike protein, closed state
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; Tequatrovirus T4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2022-10-08
Authors: Meng, F., Wang, Q., Xie, Y., Ni, X., Huang, N.
PDB entry 8h3f: Cryo-EM Structure of the KBTBD2-CRL3-CSN complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.73 Å
Deposited: 2022-10-08
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h3g: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) E166V Mutant in Complex with Inhibitor Enstrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.46 Å
Deposited: 2022-10-08
Authors: Wang, H., Lin, M., Duan, Y., Zhang, X., Zhou, H., Bian, Q., Liu, X., Rao, Z., Yang, H.
PDB entry 8h3h: Human ATAD2 Walker B mutant, ATP state
Classification: GENE REGULATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.15 Å
Deposited: 2022-10-08
Authors: Cho, C., Song, J.
PDB entry 8h3i: Crystal Structure of the apo-form Pathogenesis-related Protein HcPR10 from Halostachys caspica
Classification: ALLERGEN
Source organism: Halostachys caspica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-08
Authors: Wang, Z., Ren, Y.
PDB entry 8h3j: Crystal Structure of Pathogenesis-related Protein HcPR10 from Halostachys caspica in complex with trans-Zeatin-riboside
Classification: ALLERGEN
Source organism: Halostachys caspica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-10-08
Authors: Wang, Z., Ren, Y.
PDB entry 8h3k: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) Double Mutant (L50F and E166V) in Complex with Inhibitor Enstrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-08
Authors: Wang, H., Lin, M., Duan, Y., Zhang, X., Zhou, H., Bian, Q., Liu, X., Rao, Z., Yang, H.
PDB entry 8h3l: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) Double Mutant (T21I and E166V) in Complex with Inhibitor Enstrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-08
Authors: Wang, H., Lin, M., Duan, Y., Zhang, X., Zhou, H., Bian, Q., Liu, X., Rao, Z., Yang, H.
PDB entry 8h3m: Conformation 1 of SARS-CoV-2 Omicron BA.1 Variant Spike protein complexed with MO1 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.48 Å
Deposited: 2022-10-09
Authors: Ishimaru, H., Nishimura, M., Sutandhio, S., Shigematsu, H., Kato, K., Hasegawa, N., Mori, Y.
PDB entry 8h3n: Conformation 2 of SARS-CoV-2 Omicron BA.1 Variant Spike protein complexed with MO1 Fab
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.73 Å
Deposited: 2022-10-09
Authors: Ishimaru, H., Nishimura, M., Sutandhio, S., Shigematsu, H., Kato, K., Hasegawa, N., Mori, Y.
PDB entry 8h3q: Cryo-EM Structure of the CAND1-Cul3-Rbx1 complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.76 Å
Deposited: 2022-10-09
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h3r: Cryo-EM Structure of the KBTBD2-CRL3~N8 dimeric complex
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.36 Å
Deposited: 2022-10-09
Authors: Hu, Y., Mao, Q., Chen, Z., Sun, L.
PDB entry 8h3s: Substrate-bound EP, polyA model
Classification: MEMBRANE PROTEIN/HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.9 Å
Deposited: 2022-10-09
Authors: Ding, Z.Y., Huang, H.J.
PDB entry 8h3t: The crystal structure of AlpH
Classification: LYASE
Source organism: Streptomyces galtieri
Experimental method: X-RAY DIFFRACTION
Resolution: 1.866 Å
Deposited: 2022-10-09
Authors: Zhao, Y., Li, M., Jiang, M., Pan, L.F.
PDB entry 8h3u: Inhibitor-bound EP, polyA model
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.7 Å
Deposited: 2022-10-09
Authors: Ding, Z.Y., Huang, H.J.
PDB entry 8h3v: Cryo-EM structure of the full transcription activation complex NtcA-NtcB-TAC
Classification: TRANSCRIPTION
Source organism: Anabaena; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.5 Å
Deposited: 2022-10-09
Authors: Han, S.J., Jiang, Y.L., You, L.L., Shen, L.Q., Wu, X.X., Yang, F., Kong, W.W., Chen, Z.P., Zhang, Y., Zhou, C.Z.
PDB entry 8h3w: Crystal structure of chicken egg lysozyme at ambient temperature
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2022-10-09
Authors: DeMirci, H.
PDB entry 8h3x: Bacteroide Fragilis Toxin in complex with nanobody 282
Classification: TOXIN
Source organism: Bacteroides fragilis; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2022-10-09
Authors: Wen, Y., Guo, Y.
PDB entry 8h3y: Bacteroide Fragilis Toxin in complex with nanobody 327
Classification: TOXIN
Source organism: Bacteroides fragilis; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-10-09
Authors: Wen, Y., Guo, Y.
PDB entry 8h3z: Crystal structure of the effector-binding domain of the LysR-type trasncription factor NtcB from Anabaena PCC 7120
Classification: TRANSCRIPTION/DNA
Source organism: Anabaena
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-10-09
Authors: Han, S.J., Jiang, Y.L., Zhou, C.Z.
PDB entry 8h40: Cryo-EM structure of the transcription activation complex NtcA-TAC
Classification: TRANSCRIPTION
Source organism: Anabaena; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å
Deposited: 2022-10-09
Authors: Han, S.J., Jiang, Y.L., You, L.L., Shen, L.Q., Wu, X.X., Yang, F., Kong, W.W., Chen, Z.P., Zhang, Y., Zhou, C.Z.
PDB entry 8h41: Crystal structure of a decarboxylase from Trichosporon moniliiforme in complex with o-nitrophenol
Classification: HYDROLASE
Source organism: Cutaneotrichosporon moniliiforme
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-10-09
Authors: Gao, J., Zhao, Y.P., Li, Q., Liu, W.D., Sheng, X.
PDB entry 8h43: Crystal structure of PHF1 Tudor domain in complex with hit 1
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-10
Authors: Liu, Y., Ruan, K.
PDB entry 8h44: Blasnase-P55N
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h45: Blasnase-T13A/P55N
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h46: Blasnase-T13A/P55N with L-asn
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h47: Blasnase-T13A/P55F
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h48: Blasnase-T13A/P55F with L-asn
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h49: Blasnase-M57P
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h4a: Blasnase-T13A/M57P
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h4b: Blasnase-T13A/M57P with L-asn
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h4c: Blasnase-T13A/M57P
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h4d: Blasnase-T13A/M57N
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h4e: Blasnase-T13A/P55N with D-asn
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h4f: Blasnase-T13A/P55F with D-asn
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h4g: Blasnase-T13A/M57N
Classification: HYDROLASE
Source organism: Bacillus paralicheniformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2022-10-10
Authors: Lu, F., Wang, W., Chi, H., Ran, T.
PDB entry 8h4h: The apo structure of Aspergillomarasmine A synthetase
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pyrenophora teres f. teres 0-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-10
Authors: Lu, M., Zhang, J., Wang, Z., Han, L.
PDB entry 8h4i: DHA-bound FFAR4 in complex with Gs
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.06 Å
Deposited: 2022-10-10
Authors: He, Y., Yin, H.
PDB entry 8h4j: Crystal Structure of AzoR-FMN-Lyb24 complex
Classification: BIOSYNTHETIC PROTEIN
Source organism: Klebsiella pneumoniae 30684/NJST258_2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-10
Authors: Huang, W.
PDB entry 8h4k: GW9508-bound FFAR4 in complex with Gq
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-10
Authors: He, Y., Yin, H.
PDB entry 8h4l: DHA-bound FFAR4 in complex with Gq
Classification: MEMBRANE PROTEIN/IMMUNE SYSTEM
Source organism: Homo sapiens; Lama glama
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.07 Å
Deposited: 2022-10-10
Authors: He, Y., Yin, H.
PDB entry 8h4m: Crystal Structure of GTP-bound Irgb6_T95D mutant
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2022-10-10
Authors: Saijo-Hamano, Y., Okuma, H., Sakai, N., Kato, T., Imasaki, T., Nitta, R.
PDB entry 8h4o: Crystal Structure of nucleotide-free Irgb6_T95D mutant
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-10-11
Authors: Saijo-Hamano, Y., Okuma, H., Sakai, N., Kato, T., Imasaki, T., Nitta, R.
PDB entry 8h4p: class I sesquiterpene synthase
Classification: STRUCTURAL PROTEIN
Source organism: Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.47 Å
Deposited: 2022-10-11
Authors: Li, A.N., Lou, T.T., Ma, M.
PDB entry 8h4q: Aspergillomarasmine A biosynthese complex with OPS
Classification: BIOSYNTHETIC PROTEIN
Source organism: Pyrenophora teres f. teres 0-1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-10-11
Authors: Lu, M., Zhang, J., Wang, Z., Han, L.
PDB entry 8h4r: The Crystal Structure of CDK3 and CyclinE1 Complex with Dinaciclib from Biortus
Classification: CELL CYCLE
Source organism: Homo sapiens; Schistosoma japonicum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-10-11
Authors: Gui, W., Wang, F., Cheng, W., Gao, J., Huang, Y., Ouyang, Z.
PDB entry 8h4u: Cryo-EM structure of a riboendonuclease
Classification: RNA
Source organism: Thermoclostridium caenicola
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-10-11
Authors: Li, Z., Wang, F.
PDB entry 8h4v: Mincle CRD complex with PGL trisaccharide
Classification: SUGAR BINDING PROTEIN
Source organism: Bos taurus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-10-11
Authors: Ishizuka, S., Nagae, M., Yamasaki, S.
PDB entry 8h4y: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) F140L Mutant in Complex with Inhibitor Nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-10-11
Authors: Lin, M., Liu, X.
PDB entry 8h4z: Crystal structure of carboxyspermidine dehydrogenase from Helicobacter pylori in space group P21212
Classification: BIOSYNTHETIC PROTEIN
Source organism: Helicobacter pylori NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2022-10-11
Authors: Ko, K.Y., Park, S.C., Cho, S.Y., Yoon, S.I.
PDB entry 8h50: Crystal structure of carboxyspermidine dehydrogenase from Helicobacter pylori in space group C2221
Classification: BIOSYNTHETIC PROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-10-11
Authors: Ko, K.Y., Park, S.C., Cho, S.Y., Yoon, S.I.
PDB entry 8h51: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) Double Mutant (T21I and E166V) in Complex with Inhibitor Nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.18 Å
Deposited: 2022-10-11
Authors: Lin, M., Liu, X.
PDB entry 8h52: Crystal structure of Helicobacter pylori carboxyspermidine dehydrogenase in complex with NADP
Classification: BIOSYNTHETIC PROTEIN
Source organism: Helicobacter pylori
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2022-10-11
Authors: Ko, K.Y., Park, S.C., Cho, S.Y., Yoon, S.I.
PDB entry 8h53: Human asparaginyl-tRNA synthetase in complex with asparagine-AMP
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2022-10-12
Authors: Park, J.S., Han, B.W.
PDB entry 8h55: The structure of zebrafish angiotensinogen
Classification: RECOMBINATION
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2022-10-12
Authors: Zhou, A., Wei, H.
PDB entry 8h56: Crystal structure of Rep' of porcine circovirus type 2
Classification: VIRAL PROTEIN
Source organism: Porcine circovirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.33 Å
Deposited: 2022-10-12
Authors: Guan, S.Y., Song, Y.F.
PDB entry 8h57: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) A193P Mutant in Complex with Inhibitor Nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-10-12
Authors: Lin, M., Liu, X.
PDB entry 8h58: Crystal structure of YhaJ effector binding domain
Classification: TRANSCRIPTION
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.639 Å
Deposited: 2022-10-12
Authors: Kim, M., Ryu, S.E.
PDB entry 8h59: A fungal MAP kinase in complex with an inhibitor
Classification: SIGNALING PROTEIN/INHIBITOR
Source organism: Pyricularia oryzae 70-15
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-12
Authors: Kong, Z., Zhang, X., Wang, D., Liu, J.
PDB entry 8h5a: Crystal structure of YhaJ effector binding domain (ligand-bound)
Classification: TRANSCRIPTION
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.803 Å
Deposited: 2022-10-12
Authors: Kim, M., Ryu, S.E.
PDB entry 8h5b: The cryo-EM structure of nuclear transport receptor Kap114p complex with yeast TATA-box binding protein
Classification: PROTEIN TRANSPORT
Source organism: Saccharomyces cerevisiae S288C
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.03 Å
Deposited: 2022-10-12
Authors: Hsia, K.C., Liao, C.C., Wang, C.H., Wu, Y.M.
PDB entry 8h5c: Structure of SARS-CoV-2 Omicron BA.2.75 RBD in complex with human ACE2
Classification: VIRAL PROTEIN
Source organism: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-10-12
Authors: Zhao, Z.N., Bai, B., Liu, K.F., Qi, J.X., Gao, G.F.
PDB entry 8h5d: Crystal structure of YojK mutant in complex with UDP
Classification: TRANSFERASE
Source organism: Bacillus subtilis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-10-12
Authors: Hou, X.D., Yang, S., Yin, D.J., Rao, Y.J.
PDB entry 8h5e: Crystal structure of the MgtE TM domain in complex with Ca2+ ions at 2.5 angstrom resolution
Classification: TRANSPORT PROTEIN
Source organism: Thermus thermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-10-13
Authors: Teng, X., Sheng, D., Hattori, M.
PDB entry 8h5f: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) L167F Mutant in Complex with Inhibitor Nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.79 Å
Deposited: 2022-10-13
Authors: Lin, M., Liu, X.
PDB entry 8h5j: Crystal structure of PETase S121E/A180V/P181V/D186H/N233C/S242T/N246D/S282C mutant from Ideonella sakaiensis
Classification: HYDROLASE
Source organism: Ideonella sakaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-10-13
Authors: Lee, S.H., Seo, H., Kim, K.-J.
PDB entry 8h5k: Crystal structure of PETase N37D/S121E/R132E/A171C/A180V/P181V/D186H/S193C/R224E/N233C/S242T/N246D/S282C mutant from Ideonella sakaiensis
Classification: HYDROLASE
Source organism: Ideonella sakaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-10-13
Authors: Lee, S.H., Seo, H., Kim, K.-J.
PDB entry 8h5l: Crystal structure of PETase N37D/S121E/R132E/A171C/A180V/P181V/D186H/S193C/A202C/V211C/S214Y/R224E/N233C/S242T/N246D/N275C/S282C/F284C mutant from Ideonella sakaiensis
Classification: HYDROLASE
Source organism: Ideonella sakaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-10-13
Authors: Lee, S.H., Seo, H., Kim, K.-J.
PDB entry 8h5m: Crystal structure of PETase S121E/D186H/N233C/S242T/N246D/S282C mutant from Ideonella sakaiensis
Classification: HYDROLASE
Source organism: Ideonella sakaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.89 Å
Deposited: 2022-10-13
Authors: Lee, S.H., Seo, H., Kim, K.-J.
PDB entry 8h5o: Crystal structure of PETase S121E/P181V/D186H/N233C/S242T/N246D/S282C mutant from Ideonella sakaiensis
Classification: HYDROLASE
Source organism: Ideonella sakaiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-10-13
Authors: Lee, S.H., Seo, H., Kim, K.-J.
PDB entry 8h5p: Crystal Structure of SARS-CoV-2 Main Protease (Mpro) Double Mutant (L50F and E166V) in Complex with Inhibitor Nirmatrelvir
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.67 Å
Deposited: 2022-10-13
Authors: Lin, M., Liu, X.
PDB entry 8h5s: Crystal structure of Rv3400 from Mycobacterium tuberculosis
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-10-13
Authors: Singh, L., Karthikeyan, S., Thakur, K.G.
PDB entry 8h5t: Crystal structure of SARS-CoV-2 spike receptor-binding domain in complex with neutralizing nanobody Nb-015
Classification: VIRAL PROTEIN
Source organism: Severe acute respiratory syndrome coronavirus 2; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-13
Authors: Yang, J., Lin, S., Lu, G.W.