LiteFold/PDB huggingface dataset:
PDB entry 3ejn: CRYSTAL STRUCTURE OF A SUSD HOMOLOG (BF3025) FROM BACTEROIDES FRAGILIS NCTC 9343 AT 1.50 A RESOLUTION
Classification: SUGAR BINDING PROTEIN
Source organism: Bacteroides fragilis NCTC 9343
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-09-18
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ejo: Coproporphyrinogen III oxidase from Leishmania donovani
Classification: OXIDOREDUCTASE
Source organism: Leishmania donovani
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-18
Authors: Larson, E.T., Merritt, E.A., Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
PDB entry 3ejp: Golgi alpha-Mannosidase II in complex with 5-substituted swainsonine analog: (5R)-5-[2'-oxo-2'-(phenyl)ethyl]-swainsonine
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2008-09-18
Authors: Kuntz, D.A., Rose, D.R.
PDB entry 3ejq: Golgi alpha-Mannosidase II in complex with 5-substitued swainsonine analog: (5R)-5-[2'-oxo-2'-(4-methylphenyl)ethyl]-swainsonine
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2008-09-18
Authors: Kuntz, D.A., Rose, D.R.
PDB entry 3ejr: Golgi alpha-Mannosidase II in complex with 5-substitued swainsonine analog: (5R)-5-[2'-oxo-2'-(4-tert-butylphenyl)ethyl]-swainsonine
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.27 Å
Deposited: 2008-09-18
Authors: Kuntz, D.A., Shea, K., Rose, D.R.
PDB entry 3ejs: Golgi alpha-Mannosidase II in complex with 5-substituted swainsonine analog: (5S)-5-[2'-(4-tert-butylphenyl)ethyl]-swainsonine
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2008-09-18
Authors: Kuntz, D.A., Shea, K., Rose, D.R.
PDB entry 3ejt: Golgi alpha-Mannosidase II in complex with 5-substituted swainsonine analog:(5R)-5-[2'-(4-tert-butylphenyl)ethyl]-swainsonine
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.35 Å
Deposited: 2008-09-18
Authors: Kuntz, D.A., Shea, K., Rose, D.R.
PDB entry 3eju: Golgi alpha-Mannosidase II in complex with 5-substituted swainsonine analog:(5S)-5-[2'-oxo-2'-(4-tert-butylphenyl)ethyl]-swainsonine
Classification: HYDROLASE
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.32 Å
Deposited: 2008-09-18
Authors: Kuntz, D.A., Shea, K., Rose, D.R.
PDB entry 3ejv: Crystal structure of a cystatin-like protein (saro_2766) from novosphingobium aromaticivorans dsm at 1.40 A resolution
Classification: UNKNOWN FUNCTION
Source organism: Novosphingobium aromaticivorans DSM 12444
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2008-09-18
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ejw: Crystal Structure of the Sinorhizobium meliloti AI-2 receptor, SmLsrB
Classification: SIGNALING PROTEIN
Source organism: Sinorhizobium meliloti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-18
Authors: Miller, S.T., McAuley, J.R., Pereira, C., Xavier, K.B., Taga, M.E.
PDB entry 3ejx: Crystal structure of diaminopimelate epimerase from Arabidopsis thaliana in complex with LL-AziDAP
Classification: ISOMERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2008-09-18
Authors: Pillai, B., Moorthie, V.A., Cherney, M.M., Vederas, J.C., James, M.N.G.
PDB entry 3ejy: Structure of E203H mutant of E.coli Cl-/H+ antiporter, CLC-ec1
Classification: IMMUNE SYSTEM/PROTON TRANSPORT
Source organism: Escherichia coli; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-09-18
Authors: Lim, H.-H., Miller, C.
PDB entry 3ejz: Structure of E203V mutant E.coli Cl-/H+ exchanger, CLC-ec1
Classification: IMMUNE SYSTEM/PROTON TRANSPORT
Source organism: Escherichia coli; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2008-09-18
Authors: Lim, H.-H., Miller, C.
PDB entry 3ek1: Crystal structure of aldehyde dehydrogenase from brucella melitensis biovar abortus 2308
Classification: OXIDOREDUCTASE
Source organism: Brucella melitensis biovar Abortus 2308
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-09-18
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3ek2: Crystal structure of eonyl-(acyl carrier protein) reductase from burkholderia pseudomallei 1719b
Classification: OXIDOREDUCTASE
Source organism: Burkholderia pseudomallei 1710b
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-09-18
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3ek3: Crystal structure of Nitroreductase with Bound FMN (YP_211706.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution
Classification: FLAVOPROTEIN
Source organism: Bacteroides fragilis NCTC 9343
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-09-18
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3ek4: Calcium-saturated GCaMP2 Monomer
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria; artificial gene; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2008-09-18
Authors: Akerboom, J., Velez Rivera, J.D., Looger, L.L., Schreiter, E.R.
PDB entry 3ek5: Unique GTP-binding Pocket and Allostery of UMP Kinase from a Gram-Negative Phytopathogen Bacterium
Classification: TRANSFERASE
Source organism: Xanthomonas campestris pv. campestris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2008-09-18
Authors: Tu, J.-L., Chin, K.-H., Wang, A.H.-J., Chou, S.-H.
PDB entry 3ek6: Unique GTP-binding Pocket and Allostery of UMP Kinase from a Gram-Negative Phytopathogen Bacterium
Classification: TRANSFERASE
Source organism: Xanthomonas campestris pv. campestris
Experimental method: X-RAY DIFFRACTION
Resolution: 2.34 Å
Deposited: 2008-09-18
Authors: Tu, J.-L., Chin, K.-H., Wang, A.H.-J., Chou, S.-H.
PDB entry 3ek7: Calcium-saturated GCaMP2 dimer
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria; artificial gene; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-09-18
Authors: Akerboom, J., Velez Rivera, J.D., Looger, L.L., Schreiter, E.R.
PDB entry 3ek8: Calcium-saturated GCaMP2 T116V/G87R mutant monomer
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria; artificial gene; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-09-19
Authors: Akerboom, J., Velez Rivera, J.D., Looger, L.L., Schreiter, E.R.
PDB entry 3ek9: SPRY Domain-containing SOCS Box Protein 2: Crystal Structure and Residues Critical for Protein Binding
Classification: PROTEIN BINDING
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-09-19
Authors: Kuang, Z., Yao, S., Xu, Y., Garrett, T.J.P., Norton, R.S.
PDB entry 3eka: Crystal structure of the complex of hyaluranidase trimer with ascorbic acid at 3.1 A resolution reveals the locations of three binding sites
Classification: LYASE
Source organism: Streptococcus pyogenes
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-09-19
Authors: Mishra, P., Ethayathulla, A.S., Prem Kumar, R., Singh, N., Sharma, S., Kaur, P., Bhakuni, V., Singh, T.P.
PDB entry 3ekb: Crystal structure of the A264C mutant heme domain of cytochrome P450 BM3
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-19
Authors: Leys, D.
PDB entry 3ekc: structure of W60V beta-2 microglobulin mutant
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-19
Authors: Ricagno, S., Sangiovanni, E., Bellotti, V., Bolognesi, M.
PDB entry 3ekd: Crystal structure of the A264M heme domain of cytochrome P450 BM3
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-09-19
Authors: Toogood, H.S., Leys, D.
PDB entry 3eke: Crystal structure of IBV X-domain at pH 5.6
Classification: HYDROLASE
Source organism: Avian infectious bronchitis virus (strain Beaudette)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-09-19
Authors: Piotrowski, Y., Hansen, G., Hilgenfeld, R.
PDB entry 3ekf: Crystal structure of the A264Q heme domain of cytochrome P450 BM3
Classification: OXIDOREDUCTASE
Source organism: Bacillus megaterium
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-09-19
Authors: Toogood, H.S., Leys, D.
PDB entry 3ekg: CRYSTAL STRUCTURE OF L-RHAMNONATE DEHYDRATASE FROM AZOTOBACTER VINELANDII complexed with Mg and L-TARTRATE
Classification: LYASE
Source organism: Azotobacter vinelandii AvOP
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-09-19
Authors: Fedorov, A.A., Fedorov, E.V., Sauder, J.M., Burley, S.K., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3ekh: Calcium-saturated GCaMP2 T116V/K378W mutant monomer
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria; artificial gene; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-19
Authors: Akerboom, J., Velez Rivera, J.D., Looger, L.L., Schreiter, E.R.
PDB entry 3eki: Structural insights of the Mycoplasma hyorhinis protein Mh-p37: A putative thiamine pyrophosphate transporter
Classification: TPP BINDING PROTEIN
Source organism: Mycoplasma hyorhinis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-09-19
Authors: Sippel, K.H., Robbins, A.H., Reutzel, R., McKenna, R.
PDB entry 3ekj: Calcium-free GCaMP2 (calcium binding deficient mutant)
Classification: FLUORESCENT PROTEIN
Source organism: Aequorea victoria; artificial gene; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-09-19
Authors: Akerboom, J., Velez Rivera, J.D., Looger, L.L., Schreiter, E.R.
PDB entry 3ekk: Insulin receptor kinase complexed with an inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-09-19
Authors: Chamberlain, S., Atkins, C., Deanda, F., Dumble, M., Gerding, R., Groy, A., Korenchuk, S., Kumar, R., Lei, H., Mook, R., Moorthy, G., Redman, A., Rowland, J., Sabbatini, P., Shewchuk, L.
PDB entry 3ekl: Structural Characterization of tetrameric Mycobacterium tuberculosis fructose 1,6-bisphosphate aldolase - substrate binding and catalysis mechanism of a class IIa bacterial aldolase
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.51 Å
Deposited: 2008-09-19
Authors: Pegan, S., Rukseree, K., Franzblau, S.G., Mesecar, A.D.
PDB entry 3ekm: Crystal structure of diaminopimelate epimerase form arabidopsis thaliana in complex with irreversible inhibitor DL-AziDAP
Classification: ISOMERASE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-19
Authors: Pillai, B., Moorthie, V.A., Cherney, M.M., van Belkum, M.J., Vederas, J.C., James, M.N.G.
PDB entry 3ekn: Insulin receptor kinase complexed with an inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-09-19
Authors: Chamberlain, S., Atkins, C., Deanda, F., Dumble, M., Gerding, R., Groy, A., Korenchuk, S., Kumar, R., Lei, H., Mook, R., Moorthy, G., Redman, A., Rowland, J., Shewchuk, L.
PDB entry 3eko: Dihydroxylphenyl amides as inhibitors of the Hsp90 molecular chaperone
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-09-19
Authors: Gajiwala, K.S.
PDB entry 3ekp: Crystal Structure of the inhibitor Amprenavir (APV) in complex with a multi-drug resistant HIV-1 protease variant (L10I/G48V/I54V/V64I/V82A)Refer: FLAP+ in citation
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2008-09-19
Authors: Prabu-Jayabalan, M., King, N.M., Bandaranayake, R.M.
PDB entry 3ekq: Crystal structure of inhibitor saquinavir (SQV) in complex with multi-drug resistant HIV-1 protease (L63P/V82T/I84V) (referred to as ACT in paper)
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-09-19
Authors: Prabu-Jeyabalan, M., King, N.M., Schiffer, C.A., Nalivaika, E.
PDB entry 3ekr: Dihydroxylphenyl amides as inhibitors of the Hsp90 molecular chaperone
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-19
Authors: Gajiwala, K.S.
PDB entry 3eks: Crystal Structure of Monomeric Actin bound to Cytochalasin D
Classification: CONTRACTILE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-19
Authors: Nair, U.B., Joel, P.B., Wan, Q., Lowey, S., Rould, M.A., Trybus, K.M.
PDB entry 3ekt: Crystal Structure of the inhibitor Darunavir (DRV) in complex with a multi-drug resistant HIV-1 protease variant (L10F/G48V/I54V/V64I/V82A) (Refer: FLAP+ in citation.)
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2008-09-19
Authors: Prabu-Jeyabalan, M., King, N.M., Bandaranayake, R.M.
PDB entry 3eku: Crystal Structure of Monomeric Actin bound to Cytochalasin D
Classification: CONTRACTILE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-09-19
Authors: Nair, U.B., Joel, P.B., Wan, Q., Lowey, S., Rould, M.A., Trybus, K.M.
PDB entry 3ekv: Crystal structure of the wild type HIV-1 protease with the inhibitor, Amprenavir
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-09-19
Authors: Schiffer, C.A., Nalam, M.N.L.
PDB entry 3ekw: Crystal structure of the inhibitor Atazanavir (ATV) in complex with a multi-drug resistance HIV-1 protease variant (L10I/G48V/I54V/V64I/V82A) Refer: FLAP+ in citation.
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-09-19
Authors: Prabu-Jeyabalan, M., King, N.M., Bandaranayake, R.M.
PDB entry 3ekx: Crystal structure of the wild-type HIV-1 protease with the inhibitor, Nelfinavir
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.97 Å
Deposited: 2008-09-19
Authors: Schiffer, C.A., Nalam, M.N.L.
PDB entry 3eky: Crystal Structure of wild-type HIV protease in complex with the inhibitor, Atazanavir
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-19
Authors: Schiffer, C.A., Nalam, M.N.L.
PDB entry 3ekz: Structural Characterization of tetrameric Mycobacterium tuberculosis fructose 1,6-bisphosphate aldolase - substrate binding and catalysis mechanism of a class IIa bacterial aldolase
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
Deposited: 2008-09-19
Authors: Pegan, S., Rukseree, K., Franzblau, S.G., Mesecar, A.D.
PDB entry 3el0: Crystal structure of the inhibitor Nelfinavir (NFV) in complex with a multi-drug resistant HIV-1 protease variant (L10I/G48V/I54V/V64I/V82A) (Refer: FLAP+ in citation)
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-19
Authors: Prabu-Jeyabalan, M., King, N.M.
PDB entry 3el1: Crystal Structure of wild-type HIV protease in complex with the inhibitor, Atazanavir
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-09-19
Authors: Schiffer, C.A., Nalam, M.N.L.
PDB entry 3el2: Crystal Structure of Monomeric Actin Bound to Ca-ATP
Classification: CONTRACTILE PROTEIN
Source organism: Drosophila melanogaster
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-09-19
Authors: Nair, U.B., Joel, P.B., Wan, Q., Lowey, S., Rould, M.A., Trybus, K.M.
PDB entry 3el3: Distinct Monooxygenase and Farnesene Synthase Active Sites in Cytochrome P450 170A1
Classification: OXIDOREDUCTASE
Source organism: Streptomyces coelicolor
Experimental method: X-RAY DIFFRACTION
Resolution: 3.3 Å
Deposited: 2008-09-19
Authors: Zhao, B., Waterman, M.R.
PDB entry 3el4: Crystal structure of inhibitor saquinavir (SQV) complexed with the multidrug HIV-1 protease variant L63P/V82T/I84V
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-19
Authors: Prabu-Jeyabalan, M., King, N., Schiffer, C.
PDB entry 3el5: Crystal structure of nelfinavir (NFV) complexed with a multidrug variant (ACT) (V82T/I84V) of HIV-1 protease
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-09-20
Authors: King, N., Prabu-Jeyabalan, M., Schiffer, C.
PDB entry 3el6: Crystal Structure of the Erythromycin Dehydratase
Classification: LYASE
Source organism: Saccharopolyspora erythraea
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-09-20
Authors: Keatinge-Clay, A.T.
PDB entry 3el7: Crystal structure of c-Src in complex with pyrazolopyrimidine 3
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-09-20
Authors: Dar, A.C., Lopez, M.S., Shokat, K.M.
PDB entry 3el8: Crystal structure of c-Src in complex with pyrazolopyrimidine 5
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-20
Authors: Dar, A.C., Lopez, M.S., Shokat, K.M.
PDB entry 3el9: Crystal structure of atazanavir (ATV) in complex with a multidrug HIV-1 protease (V82T/I84V)
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-09-21
Authors: Prabu-Jeyabalan, M., King, N., Schiffer, C.
PDB entry 3ela: Crystal structure of active site inhibited coagulation factor VIIA mutant in complex with soluble tissue factor
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-09-21
Authors: Bjelke, J.R., Fodje, M., Svensson, L.A.
PDB entry 3elb: Human CTP: Phosphoethanolamine Cytidylyltransferase in complex with CMP
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-22
Authors: Karlberg, T., Welin, M., Andersson, J., Arrowsmith, C.H., Berglund, H., Bountra, C., Collins, R., Dahlgren, L.G., Edwards, A.M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Johansson, A., Johansson, I., Kotenyova, T., Lehtio, L., Moche, M., Nilsson, M.E., Nordlund, P., Nyman, T., Persson, C., Sagemark, J., Thorsell, A.G., Tresaugues, L., Van Den Berg, S., Weigelt, J., Wikstrom, M., Wisniewska, M., Schuler, H., Structural Genomics Consortium (SGC)
PDB entry 3elc: Crystal structure of 2C-methyl-D-erythritol 2,4-clycodiphosphate synthase complexed with ligand
Classification: LYASE
Source organism: Escherichia coli K-12
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-09-22
Authors: Hunter, W.N., Ramsden, N.L., Ulaganathan, V.
PDB entry 3eld: Wesselsbron methyltransferase in complex with Sinefungin
Classification: TRANSFERASE
Source organism: Wesselsbron virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-09-22
Authors: Bollati, M., Milani, M., Mastrangelo, E., Ricagno, S., Bolognesi, M.
PDB entry 3ele: Crystal structure of Amino Transferase (RER070207001803) from Eubacterium rectale at 2.10 A resolution
Classification: TRANSFERASE
Source organism: Eubacterium rectale
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-09-22
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3elf: Structural Characterization of tetrameric Mycobacterium tuberculosis fructose 1,6-bisphosphate aldolase - substrate binding and catalysis mechanism of a class IIa bacterial aldolase
Classification: LYASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.31 Å
Deposited: 2008-09-22
Authors: Pegan, S., Rukseree, K., Franzblau, S.G., Mesecar, A.D.
PDB entry 3elg: Crystal structure of a putative periplasmic protein of unknown function (bvu_2443) from bacteroides vulgatus atcc 8482 at 1.64 A resolution
Classification: MEMBRANE PROTEIN
Source organism: Bacteroides vulgatus ATCC 8482
Experimental method: X-RAY DIFFRACTION
Resolution: 1.64 Å
Deposited: 2008-09-22
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3elh: X-ray structure of Acanthamoeba ployphaga mimivirus nucleoside diphosphate kinase complexed with dUDP
Classification: TRANSFERASE
Source organism: Acanthamoeba polyphaga mimivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-09-22
Authors: Jeudy, S., Lartigue, A., Claverie, J.M., Abergel, C.
PDB entry 3eli: Crystal structure of the AHSA1 (SPO3351) protein from Silicibacter pomeroyi, Northeast Structural Genomics Consortium Target SiR160
Classification: structural genomics, unknown function
Source organism: Silicibacter pomeroyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2008-09-22
Authors: Forouhar, F., Su, M., Seetharaman, J., Janjua, H., Xiao, R., Ciccosanti, C., Foote, E.L., Wang, D., Tong, S., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3elj: Jnk1 complexed with a bis-anilino-pyrrolopyrimidine inhibitor.
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-22
Authors: Chamberlain, S., Atkins, C., Deanda, F., Dumble, M., Gerding, R., Groy, A., Korenchuk, S., Kumar, R., Lei, H., Mook, R., Moorthy, G., Redman, A., Rowland, J., Shewchuk, L., Vicentini, G., Mosley, J.
PDB entry 3elk: Crystal structure of putative transcriptional regulator TA0346 from Thermoplasma acidophilum
Classification: transcription regulator
Source organism: Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-09-22
Authors: Grantz Saskova, K., Chruszcz, M., Evdokimova, E., Egorova, O., Savchenko, A., Edwards, A., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)
PDB entry 3ell: Structure of the hemophore from Pseudomonas aeruginosa (HasAp)
Classification: HEME BINDING PROTEIN
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2008-09-22
Authors: Schonbrunn, E., Rivera, M.
PDB entry 3elm: Crystal Structure of MMP-13 Complexed with Inhibitor 24f
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-09-22
Authors: Kulathila, R., Monovich, L., Koehn, J.
PDB entry 3eln: A Putative Fe2+-bound Persulfenate Intermediate in Cysteine Dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2008-09-22
Authors: Simmons, C.R., Stipanuk, M.H., Karplus, P.A.
PDB entry 3elo: Crystal Structure of Human Pancreatic Prophospholipase A2
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2008-09-22
Authors: Xu, W., Yi, L., Feng, Y., Chen, L., Liu, J.
PDB entry 3elp: Structure of cystationine gamma lyase
Classification: LYASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-09-23
Authors: Sun, Q., Sivaraman, J.
PDB entry 3elq: Crystal structure of a bacterial arylsulfate sulfotransferase
Classification: TRANSFERASE
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-23
Authors: Malojcic, G., Owen, R.L., Grimshaw, J.P., Glockshuber, R.
PDB entry 3els: Crystal Structure of Yeast Pml1p, Residues 51-204
Classification: SPLICING
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-23
Authors: Trowitzsch, S., Weber, G., Luehrmann, R., Wahl, M.C.
PDB entry 3elu: Wesselsbron virus Methyltransferase in complex with AdoMet
Classification: TRANSFERASE
Source organism: Wesselsbron virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-23
Authors: Bollati, M., Ricagno, S., Milani, M., Mastrangelo, E., Bolognesi, M.
PDB entry 3elv: Crystal Structure of Full-Length Yeast Pml1p
Classification: SPLICING
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-09-23
Authors: Trowitzsch, S., Weber, G., L hrmann, R., Wahl, M.C.
PDB entry 3elw: Wesselsbron virus Methyltransferase in complex with AdoMet and GpppG
Classification: TRANSFERASE
Source organism: Wesselsbron virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-09-23
Authors: Bollati, M., Ricagno, S., Milani, M., Mastrangelo, E., Bolognesi, M.
PDB entry 3elx: Crystal structure of apo Zebrafish Ileal Bile Acid-Binding Protein
Classification: LIPID BINDING PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-09-23
Authors: Capaldi, S., Saccomani, G., Fessas, D., Signorelli, M., Perduca, M., Monaco, H.L.
PDB entry 3ely: Wesselsbron virus Methyltransferase in complex with AdoHcy
Classification: TRANSFERASE
Source organism: Wesselsbron virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-09-23
Authors: Bollati, M., Milani, M., Ricagno, S., Mastrangelo, E., Bolognesi, M.
PDB entry 3elz: Crystal structure of Zebrafish Ileal Bile Acid-Bindin Protein complexed with cholic acid (crystal form A).
Classification: LIPID BINDING PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-09-23
Authors: Capaldi, S., Saccomani, G., Fessas, D., Signorelli, M., Perduca, M., Monaco, H.L.
PDB entry 3em0: Crystal structure of Zebrafish Ileal Bile Acid-Bindin Protein complexed with cholic acid (crystal form B).
Classification: LIPID BINDING PROTEIN
Source organism: Danio rerio
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-09-23
Authors: Capaldi, S., Saccomani, G., Fessas, D., Signorelli, M., Perduca, M., Monaco, H.L.
PDB entry 3em1: Crystal structure of the mimivirus NDK +Kpn-N62L double mutant complexed with dTDP
Classification: TRANSFERASE
Source organism: Acanthamoeba polyphaga mimivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-09-23
Authors: Jeudy, S., Lartigue, A., Claverie, J.M., Abergel, C.
PDB entry 3em2: A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine BSU-6038
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-23
Authors: Campbell, N.H., Parkinson, G., Neidle, S.
PDB entry 3em3: Crystal structure of amprenavir (APV) in complex with a drug resistant HIV-1 protease variant (I50L/A71V).
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-09-23
Authors: Prabu-Jeyabalan, M., King, N., Royer, C., Schiffer, C.
PDB entry 3em4: Crystal structure of atazanavir (ATV) in complex with I50L/A71V drug-resistant HIV-1 protease
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-09-23
Authors: Prabu-Jeyabalan, M., King, N., Royer, C., Schiffer, C.
PDB entry 3em6: Crystal structure of I50L/A71V mutant of hiv-1 protease in complex with inhibitor darunavir
Classification: HYDROLASE
Source organism: HIV-1 M:B_ARV2/SF2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-09-23
Authors: Royer, C.J., King, N.M., Prabu-Jeyabalan, M., Ng, C., Nalivaika, E.A., Schiffer, C.A.
PDB entry 3emb: Wesselsbron virus Methyltransferase in complex with AdoMet and 7MeGpppG
Classification: TRANSFERASE
Source organism: Wesselsbron virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-24
Authors: Bollati, M., Ricagno, S., Milani, M., Mastrangelo, E., Bolognesi, M.
PDB entry 3emc: Crystal structure of XynB, an intracellular xylanase from Paenibacillus barcinonensis
Classification: HYDROLASE
Source organism: Bacillus sp. BP-23
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-09-24
Authors: Sanz-Aparicio, J., Isorna, P., Gonzalez, B.
PDB entry 3emd: Wesselsbron virus Methyltransferase in complex with Sinefungin and 7MeGpppA
Classification: TRANSFERASE
Source organism: Wesselsbron virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-24
Authors: Bollati, M., Milani, M., Ricagno, S., Mastrangelo, E., Bolognesi, M.
PDB entry 3emf: Crystal structure of Haemophilus influenzae HiaBD2
Classification: CELL ADHESION
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-24
Authors: Meng, G., Waksman, G.
PDB entry 3emg: Discovery and SAR of novel 4-thiazolyl-2-phenylaminopyrimidines as potent inhibitors of spleen tyrosine kinase (SYK)
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-09-24
Authors: Ter Haar, E.
PDB entry 3emh: Structural basis of WDR5-MLL interaction
Classification: GENE REGULATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.37 Å
Deposited: 2008-09-24
Authors: Song, J.J., Kingston, R.E.
PDB entry 3emi: Crystal structure of Hia 307-422 non-adhesive domain
Classification: CELL ADHESION
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-24
Authors: Meng, G., Waksman, G.
PDB entry 3emj: 2.2 A crystal structure of inorganic pyrophosphatase from rickettsia prowazekii (p21 form)
Classification: HYDROLASE
Source organism: Rickettsia prowazekii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-09-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3emk: 2.5A crystal structure of glucose/ribitol dehydrogenase from brucella melitensis
Classification: OXIDOREDUCTASE
Source organism: Brucella melitensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2008-09-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3eml: The 2.6 A Crystal Structure of a Human A2A Adenosine Receptor bound to ZM241385.
Classification: MEMBRANE PROTEIN, RECEPTOR
Source organism: Enterobacteria phage T4; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-09-24
Authors: Jaakola, V.-P., Griffith, M.T., Hanson, M.A., Cherezov, V., Chien, E.Y.T., Lane, J.R., Ijzerman, A.P., Stevens, R.C., Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), GPCR Network (GPCR)
PDB entry 3emm: X-ray structure of protein from Arabidopsis thaliana AT1G79260 with Bound Heme
Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 1.358 Å
Deposited: 2008-09-24
Authors: Bianchetti, C.M., Bingman, C.A., Wesenberg, G.E., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)
PDB entry 3emn: The Crystal Structure of Mouse VDAC1 at 2.3 A resolution
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-24
Authors: Ujwal, R., Cascio, D., Colletier, J.-P., Faham, S., Zhang, J., Toro, L., Ping, P., Abramson, J.
PDB entry 3emo: Crystal structure of transmembrane Hia 973-1098
Classification: MEMBRANE PROTEIN/CELL ADHESION
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2008-09-24
Authors: Meng, G., Waksman, G.
PDB entry 3emp: Crystal Structure of the S-acetanilide modified form of C165S AhpC
Classification: OXIDOREDUCTASE
Source organism: Salmonella typhimurium
Experimental method: X-RAY DIFFRACTION
Resolution: 4 Å
Deposited: 2008-09-24
Authors: Karplus, P.A., Hall, A.
PDB entry 3emq: Crystal structure of xilanase XynB from Paenibacillus barcelonensis complexed with an inhibitor
Classification: HYDROLASE
Source organism: Bacillus sp. BP-23
Experimental method: X-RAY DIFFRACTION
Resolution: 2.73 Å
Deposited: 2008-09-25
Authors: Sanz-Aparicio, J., Isorna, P.
PDB entry 3emr: Crystal Structure Analysis of the ectoine hydroxylase ECTD from Salibacillus salexigens
Classification: OXIDOREDUCTASE
Source organism: Virgibacillus salexigens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-09-25
Authors: Reuter, K., Heine, A.
PDB entry 3ems: Effect of Ariginine on lysozyme
Classification: HYDROLASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.651 Å
Deposited: 2008-09-25
Authors: Ito, L., Shiraki, K., Matsuura, T., Yamaguhi, H.
PDB entry 3emt: Crystal structure of the mimivirus NDK +Kpn-R107G double mutant complexed with dGDP
Classification: TRANSFERASE
Source organism: Acanthamoeba polyphaga mimivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-09-25
Authors: Jeudy, S., Lartigue, A., Claverie, J.M., Abergel, C.
PDB entry 3emu: Crystal structure of a leucine rich repeat and phosphatase domain containing protein from Entamoeba histolytica
Classification: HYDROLASE
Source organism: Entamoeba histolytica
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-25
Authors: Bonanno, J.B., Gilmore, M., Bain, K.T., Hu, S., Ozyurt, S., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3emv: Crystal structure of Plasmodium vivax PNP with sulphate
Classification: TRANSFERASE
Source organism: Plasmodium vivax
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-09-25
Authors: Chaikuad, A., Brady, R.L.
PDB entry 3emw: Crystal Structure of human splA/ryanodine receptor domain and SOCS box containing 2 (SPSB2) in complex with a 20-residue VASA peptide
Classification: APOPTOSIS
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2008-09-25
Authors: Filippakopoulos, P., Sharpe, T., Keates, T., Murray, J.W., Savitsky, P., Roos, A.K., Pike, A.C.W., Von Delft, F., Arrowsmith, C.H., Edwards, A.M., Weigelt, J., Bountra, C., Knapp, S., Bullock, A., Structural Genomics Consortium (SGC)
PDB entry 3emx: Crystal structure of thioredoxin from Aeropyrum pernix
Classification: OXIDOREDUCTASE
Source organism: Aeropyrum pernix
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2008-09-25
Authors: Bonanno, J.B., Dickey, M., Bain, K.T., Miller, S., Sampathkumar, P., Wasserman, S., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
PDB entry 3emy: Crystal structure of Trichoderma reesei aspartic proteinase complexed with pepstatin A
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Hypocrea jecorina; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-09-25
Authors: Nascimento, A.S., Krauchenco, S., Golubev, A.M., Gustchina, A., Wlodawer, A., Polikarpov, I.
PDB entry 3emz: Crystal structure of xylanase XynB from Paenibacillus barcinonensis complexed with a conduramine derivative
Classification: HYDROLASE
Source organism: Bacillus sp. BP-23
Experimental method: X-RAY DIFFRACTION
Resolution: 2.08 Å
Deposited: 2008-09-25
Authors: Sanz-Aparicio, J., Isorna, P.
PDB entry 3en0: The Structure of Cyanophycinase
Classification: HYDROLASE
Source organism: Synechocystis sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2008-09-25
Authors: Kimber, M.S., Law, A.M., Lai, S.W.S., Tavares, J.
PDB entry 3en1: Crystal structure of Toluene 2,3-Dioxygenase
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas putida
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2008-09-25
Authors: Friemann, R., Lee, K., Brown, E.N., Gibson, D.T., Eklund, H., Ramaswamy, S.
PDB entry 3en2: Three-dimensional structure of the protein priB from Ralstonia solanacearum at the resolution 2.3A. Northeast Structural Genomics Consortium target RsR213C.
Classification: structural genomics, unknown function
Source organism: Ralstonia solanacearum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-25
Authors: Kuzin, A.P., Neely, H., Wang, H., Sahdev, S., Foote, E.L., Xiao, R., Liu, J., Everett, J.K., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
PDB entry 3en3: Crystal Structure of the GluR4 Ligand-Binding domain in complex with kainate
Classification: MEMBRANE PROTEIN
Source organism: Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.43 Å
Deposited: 2008-09-25
Authors: Gill, A., Madden, D.R.
PDB entry 3en4: Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP121, a multitargeted kinase inhibitor
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2008-09-25
Authors: Blair, J.A., Apsel, B., Knight, Z.A., Shokat, K.M.
PDB entry 3en5: Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP494, a multitargeted kinase inhibitor
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.66 Å
Deposited: 2008-09-25
Authors: Blair, J.A., Apsel, B., Knight, Z.A., Shokat, K.M.
PDB entry 3en6: Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP102, a multitargeted kinase inhibitor
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.39 Å
Deposited: 2008-09-25
Authors: Blair, J.A., Apsel, B., Knight, Z.A., Shokat, K.M.
PDB entry 3en7: Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with S1, a multitargeted kinase inhibitor
Classification: TRANSFERASE
Source organism: Gallus gallus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.81 Å
Deposited: 2008-09-25
Authors: Blair, J.A., Apsel, B., Knight, Z.A., Shokat, K.M.
PDB entry 3en8: Crystal structure of NTF-2 like protein of unknown function (YP_553245.1) from BURKHOLDERIA XENOVORANS LB400 at 1.85 A resolution
Classification: structural genomics, unknown function
Source organism: Burkholderia xenovorans LB400
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-09-25
Authors: Joint Center for Structural Genomics (JCSG)
PDB entry 3en9: Structure of the Methanococcus jannaschii KAE1-BUD32 fusion protein
Classification: HYDROLASE
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.67 Å
Deposited: 2008-09-25
Authors: Neculai, D.
PDB entry 3ena: Crystal structure of the mimivirus NDK +Kpn-N62L-R107G triple mutant complexed with dGDP
Classification: TRANSFERASE
Source organism: Acanthamoeba polyphaga mimivirus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2008-09-25
Authors: Jeudy, S., Lartigue, A., Claverie, J.M., Abergel, C.
PDB entry 3enb: Crystal Structure of PRP8 core domain IV
Classification: RNA BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2008-09-25
Authors: Schellenberg, M.J., Ritchie, D.B., MacMillan, A.M.
PDB entry 3enc: Crystal structure of Pyrococcus furiosus PCC1 dimer
Classification: UNKNOWN FUNCTION
Source organism: Pyrococcus furiosus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6304 Å
Deposited: 2008-09-25
Authors: Neculai, D.
PDB entry 3ene: Complex of PI3K gamma with an inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2008-09-25
Authors: Apsel, B., Blair, J.A., Gonzalez, B.Z., Nazif, T.M., Feldman, M.E., Williams, R.L., Shokat, K.M., Knight, Z.A.
PDB entry 3eng: STRUCTURE OF ENDOGLUCANASE V CELLOBIOSE COMPLEX
Classification: GLYCOSYL HYDROLASE
Source organism: Humicola insolens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 1996-10-17
Authors: Davies, G.J., Schulein, M.
PDB entry 3enh: Crystal structure of Cgi121/Bud32/Kae1 complex
Classification: hydrolase/unknown function
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 3.6 Å
Deposited: 2008-09-25
Authors: Neculai, D.
PDB entry 3eni: Crystal structure of the Fenna-Matthews-Olson Protein from Chlorobaculum Tepidum
Classification: PHOTOSYNTHESIS
Source organism: Chlorobaculum tepidum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2008-09-25
Authors: Tronrud, D., Camara-Artigas, A., Blankenship, R., Allen, J.P.
PDB entry 3enj: Structure of Pig Heart Citrate Synthase at 1.78 A resolution
Classification: LYASE, TRANSFERASE
Source organism: Sus scrofa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2008-09-25
Authors: Larson, S.B., Day, J.S., Nguyen, C., Cudney, R., McPherson, A., Center for High-Throughput Structural Biology (CHTSB)
PDB entry 3enk: 1.9A crystal structure of udp-glucose 4-epimerase from burkholderia pseudomallei
Classification: ISOMERASE
Source organism: Burkholderia pseudomallei 1710b
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2008-09-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3enl: REFINED STRUCTURE OF YEAST APO-ENOLASE AT 2.25 ANGSTROMS RESOLUTION
Classification: CARBON-OXYGEN LYASE
Source organism: Saccharomyces cerevisiae
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 1990-11-13
Authors: Lebioda, L., Stec, B.
PDB entry 3enm: The structure of the MAP2K MEK6 reveals an autoinhibitory dimer
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2008-09-25
Authors: Min, X., Akella, R., He, H., Humphreys, J.M., Tsutakawa, S., Lee, S.-J., Tainer, J.A., Cobb, M.H., Goldsmith, E.J.
PDB entry 3enn: 2.1A crystal structure of glucose/ribitol dehydrogenase from brucella melitensis (p43212)
Classification: OXIDOREDUCTASE
Source organism: Brucella melitensis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2008-09-25
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 3eno: Crystal structure of Pyrococcus furiosus Pcc1 in complex with Thermoplasma acidophilum Kae1
Classification: hydrolase/unknown function
Source organism: Pyrococcus furiosus; Thermoplasma acidophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.0201 Å
Deposited: 2008-09-25
Authors: Neculai, D.
PDB entry 3enp: Crystal structure of human cgi121
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.48 Å
Deposited: 2008-09-25
Authors: Haffani, Y.Z., Ceccarelli, D.F., Neculai, D., Mao, D.Y., Sicheri, F.
PDB entry 3enq: Substrate and inhibitor complexes of ribose 5-phosphate isomerase A from Vibrio vulnificus YJ016
Classification: ISOMERASE
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-25
Authors: Min, K., Kwon, T.H., Kim, T.G.
PDB entry 3enr: ZINC-CALCIUM CONCANAVALIN A AT PH 6.15
Classification: CONCANAVALIN A
Source organism: Canavalia ensiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 1999-02-11
Authors: Bouckaert, J., Loris, R., Wyns, L.
PDB entry 3ens: Crystal structure of human FXA in complex with methyl (2Z)-3-[(3-chloro-1H-indol-7-yl)amino]-2-cyano-3-{[(3S)-2-oxo-1-(2-oxo-2-pyrrolidin-1-ylethyl)azepan-3-yl]amino}acrylate
Classification: HYDROLASE, BLOOD CLOTTING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2008-09-25
Authors: Klei, H.E.
PDB entry 3ent: Crystal structure of Nitrollin, a betagamma-crystallin from Nitrosospira multiformis-in alternate space group (P65)
Classification: STRUCTURAL PROTEIN
Source organism: Nitrosospira multiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2008-09-26
Authors: Aravind, P., Sankaranarayanan, R.
PDB entry 3enu: Crystal structure of Nitrollin, a betagamma-crystallin from Nitrosospira multiformis
Classification: STRUCTURAL PROTEIN
Source organism: Nitrosospira multiformis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2008-09-26
Authors: Aravind, P., Sankaranarayanan, R.
PDB entry 3env: Substrate and inhibitor complexes of ribose 5-phosphate isomerase from Vibrio vulnificus YJ016
Classification: ISOMERASE
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-26
Authors: Min, K., Kwon, T.H., Kim, T.G.
PDB entry 3enw: Substrate and inhibitor complexes of ribose 5-phosphate isomerase from Vibrio vulnificus YJ016
Classification: ISOMERASE
Source organism: Vibrio vulnificus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2008-09-26
Authors: Min, K., Kwon, T.H., Kim, T.G.
PDB entry 3enz: Arsenolytic structure of Plasmodium falciparum purine nucleoside phosphorylase with hypoxanthine, ribose and arsenate ion
Classification: TRANSFERASE
Source organism: Plasmodium falciparum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.03 Å
Deposited: 2008-09-26
Authors: Chaikuad, A., Brady, R.L.
PDB entry 3eo0: Structure of the Transforming Growth Factor-Beta Neutralizing Antibody GC-1008
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2008-09-26
Authors: Gruetter, C., Gruetter, M.G.
PDB entry 3eo1: Structure of the Fab Fragment of GC-1008 in Complex with Transforming Growth Factor-Beta 3
Classification: IMMUNE SYSTEM/CYTOKINE
Source organism: Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2008-09-26
Authors: Gruetter, C., Gruetter, M.G.
PDB entry 3eo2: Crystal structure of the RhoGEF domain of human neuroepithelial cell-transforming gene 1 protein
Classification: SPLICING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2008-09-26
Authors: Nedyalkova, L., Tong, Y., Tempel, W., MacKenzie, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3eo3: Crystal structure of the N-acetylmannosamine kinase domain of human GNE protein
Classification: Isomerase, Transferase
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.84 Å
Deposited: 2008-09-26
Authors: Nedyalkova, L., Tong, Y., Rabeh, W.M., Hong, B., Tempel, W., MacKenzie, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)
PDB entry 3eo4: The crystal structure of a domain from Methanocaldococcus jannaschii DSM 2661
Classification: structural genomics, unknown function
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.19 Å
Deposited: 2008-09-26
Authors: Tan, K., Hatzos, C., Freeman, L., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 3eo5: Crystal structure of the resuscitation promoting factor RpfB
Classification: CELL ADHESION
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2008-09-26
Authors: Ruggiero, A., Tizzano, B., Pedone, E., Pedone, C., Wilmanns, M., Berisio, R.