LiteFold/PDB huggingface dataset:
PDB entry 8b6d: Crystal structure of UDP-glucose pyrophosphorylase from Thermocrispum agreste DSM 44070 in complex with UDP
Classification: TRANSFERASE
Source organism: Thermocrispum agreste DSM 44070
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-09-27
Authors: Laustsen, J., Kumpf, A., Bento, I.
PDB entry 8b6e: crystal structure of the DNA-binding short chromatophore-targeted protein sCTP-23166 from Paulinella chromatophora
Classification: DNA BINDING PROTEIN
Source organism: Paulinella chromatophora
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-09-27
Authors: Macorano, L., Applegate, V., Hoeppner, A., Smits, S.H.J., Nowack, E.C.M.
PDB entry 8b6f: Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
Classification: ELECTRON TRANSPORT
Source organism: Tetrahymena thermophila SB210
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-09-27
Authors: Muhleip, A., Kock Flygaard, R., Amunts, A.
PDB entry 8b6g: Cryo-EM structure of succinate dehydrogenase complex (complex-II) in respiratory supercomplex of Tetrahymena thermophila
Classification: ELECTRON TRANSPORT
Source organism: Tetrahymena thermophila
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-09-27
Authors: Muhleip, A., Kock Flygaard, R., Baradaran, R., Amunts, A.
PDB entry 8b6h: Cryo-EM structure of cytochrome c oxidase dimer (complex IV) from respiratory supercomplex of Tetrahymena thermophila
Classification: ELECTRON TRANSPORT
Source organism: Tetrahymena thermophila SB210
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-09-27
Authors: Muhleip, A., Kock Flygaard, R., Amunts, A.
PDB entry 8b6i: KRasG12C ligand complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2022-09-27
Authors: Phillips, C., Breed, J.
PDB entry 8b6j: Cryo-EM structure of cytochrome bc1 complex (complex-III) from respiratory supercomplex of Tetrahymena thermophila
Classification: ELECTRON TRANSPORT
Source organism: Tetrahymena thermophila SB210
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-09-27
Authors: Muhleip, A., Kock Flygaard, R., Amunts, A.
PDB entry 8b6k: The crystal structure of M644G variant of DNA Pol Epsilon containing dCTP in the polymerase active site
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-09-27
Authors: Parkash, V., Johansson, E.
PDB entry 8b6l: Subtomogram average of the human Sec61-TRAP-OSTA-translocon
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 7.6 Å
Deposited: 2022-09-27
Authors: Gemmer, M., Fedry, J.M.M., Forster, F.G.
PDB entry 8b6m: Tankyrase 2 in complex with an inhibitor
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-09-27
Authors: Bosetti, C., Sowa, S.T., Lehtio, L.
PDB entry 8b6n: X-ray structure of the haloalkane dehalogenase HaloTag7 circular permutated at positions 141-156 (cpHaloTagDelta)
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-09-27
Authors: Tarnawski, M., Johnsson, K., Hiblot, J.
PDB entry 8b6o: X-ray structure of the haloalkane dehalogenase HaloTag7 circular permutated at positions 141-156 (cpHaloTagDelta) fused to M13
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-09-27
Authors: Tarnawski, M., Johnsson, K., Hiblot, J.
PDB entry 8b6p: X-ray structure of the haloalkane dehalogenase HaloTag7 circular permutated at positions 154-156 (cpHaloTag7_154-156)
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-09-27
Authors: Tarnawski, M., Johnsson, K., Hiblot, J.
PDB entry 8b6q: X-ray structure of the haloalkane dehalogenase HaloTag7 with an insertion of Calmodulin-M13 fusion at position 154-156 that mimic the structure of CaProLa, an calcium gated protein labeling technology
Classification: HYDROLASE
Source organism: Homo sapiens; Rhodococcus sp. (in: high G+C Gram-positive bacteria)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-09-27
Authors: Tarnawski, M., Johnsson, K., Hiblot, J.
PDB entry 8b6r: X-ray structure of the haloalkane dehalogenase HaloTag7 labeled with a chloroalkane Cyanine3 fluorophore substrate
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-09-27
Authors: Tarnawski, M., Hellweg, L., Hiblot, J.
PDB entry 8b6s: X-ray structure of the haloalkane dehalogenase HaloTag7 fusion to the green fluorescent protein GFP (ChemoG1) labeled with a chloroalkane tetramethylrhodamine fluorophore substrate
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-09-27
Authors: Tarnawski, M., Hellweg, L., Hiblot, J.
PDB entry 8b6t: X-ray structure of the interface optimized haloalkane dehalogenase HaloTag7 fusion to the green fluorescent protein GFP (ChemoG5-TMR) labeled with a chloroalkane tetramethylrhodamine fluorophore substrate
Classification: HYDROLASE
Source organism: Rhodococcus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-09-27
Authors: Tarnawski, M., Hellweg, L., Hiblot, J.
PDB entry 8b6u: Mpf2Ba1 monomer
Classification: TOXIN
Source organism: Pseudomonas monteilii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.134 Å
Deposited: 2022-09-27
Authors: Marini, G., Poland, B., Leininger, C., Lukoyanova, N., Spielbauer, D., Barry, J., Altier, D., Lum, A., Scolaro, E., Perez-Ortega, C., Yalpani, N., Sandahl, G., Mabry, T., Klever, J., Nowatzki, T., Zhao, J.Z., Sethi, A., Kassa, A., Crane, V., Lu, A., Nelson, M.E., Eswar, N., Topf, M., Saibil, H.R.
PDB entry 8b6v: Mp2Ba1 pre-pore
Classification: TOXIN
Source organism: Pseudomonas monteilii
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-09-27
Authors: Marini, G., Poland, B., Leininger, C., Lukoyanova, N., Spielbauer, D., Barry, J., Altier, D., Lum, A., Scolaro, E., Perez Ortega, C., Yalpani, N., Sandahl, G., Mabry, T., Klever, J., Nowatzki, T., Zhao, J.Z., Sethi, A., Kassa, A., Crane, V., Lu, A., Nelson, M.E., Eswar, N., Topf, M., Saibil, H.R.
PDB entry 8b6w: Mpf2Ba1 pore
Classification: TOXIN
Source organism: Pseudomonas monteilii
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.6 Å
Deposited: 2022-09-27
Authors: Marini, G., Poland, B., Leininger, C., Lukoyanova, N., Spielbauer, D., Barry, J., Altier, D., Lum, A., Scolaro, E., Perez Ortega, C., Yalpani, N., Sandahl, G., Mabry, T., Klever, J., Nowatzki, T., Zhao, J.Z., Sethi, A., Kassa, A., Crane, V., Lu, A., Nelson, M.E., Eswar, N., Topf, M., Saibil, H.R.
PDB entry 8b6x: NMR assignment and structure of a peptide derived from the membrane proximal external region of HIV-1 gp41 in DPC micelles
Classification: VIRAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-09-27
Authors: Jimenez, M.A., Partida-Hanon, A., Nieva, J.L.
PDB entry 8b6y: NMR assignment and structure of a peptide derived from the membrane proximal external region of HIV-1 gp41 in the presence of hexafluoroisopropanol
Classification: VIRAL PROTEIN
Experimental method: SOLUTION NMR
Deposited: 2022-09-27
Authors: Jimenez, M.A., Partida-Hanon, A., Nieva, J.L.
PDB entry 8b6z: CryoEM Structure of Extended eEF1A bound to the Ribosome in the Classical Pre State
Classification: RIBOSOME
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å
Deposited: 2022-09-27
Authors: Gemmer, M., Fedry, J.M.M., Forster, F.G.
PDB entry 8b70: KimA from B. subtilis with nucleotide second-messenger c-di-AMP bound
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.3 Å
Deposited: 2022-09-28
Authors: Vonck, J., Wieferig, J.P.
PDB entry 8b71: Upright KimA dimer with bound c-di-AMP from B. subtilis
Classification: MEMBRANE PROTEIN
Source organism: Bacillus subtilis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å
Deposited: 2022-09-28
Authors: Vonck, J., Wieferig, J.P.
PDB entry 8b72: Crystal structure of 3-hydroxydecanoyl-acyl carrier protein dehydratase (FabA) from Pseudomonas aeruginosa in complex with Z30857828
Classification: LYASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2022-09-28
Authors: Robinson, D.A., Moynie, L., Naismith, J.H., Gray, D.W.
PDB entry 8b73: Acetivibrio clariflavus beta-1,4-xylanase of Glycoside Hydrolase Family 10 (AcXyn10A).
Classification: HYDROLASE
Source organism: Acetivibrio clariflavus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.24 Å
Deposited: 2022-09-28
Authors: Hussain, N., James, J.H., Halina, M.
PDB entry 8b74: Tyrosinase from halophilic bacterium Hahella sp. CCB MM4
Classification: OXIDOREDUCTASE
Source organism: Hahella
Experimental method: X-RAY DIFFRACTION
Resolution: 1.965 Å
Deposited: 2022-09-28
Authors: Rohr, A.K., Santos, G.A., Englund, A.N.
PDB entry 8b75: CRYSTAL STRUCTURE OF HUMAN SOLUBLE ADENYLYL CYCLASE IN COMPLEX WITH THE INHIBITOR TDI-011861
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.82 Å
Deposited: 2022-09-28
Authors: Steegborn, C., Kehr, M.
PDB entry 8b76: The crystal structure of M644G variant of DNA Pol Epsilon containing dTTP in the polymerase active site
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-09-28
Authors: Parkash, V., Johansson, E.
PDB entry 8b77: The crystal structure of N828V variant of DNA Pol Epsilon containing dATP in the polymerase active site
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2022-09-29
Authors: Parkash, V., Johansson, E.
PDB entry 8b78: KRasG12C ligand complex
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.11 Å
Deposited: 2022-09-29
Authors: Phillips, C., Breed, J.
PDB entry 8b79: The crystal structure of M644G variant of DNA Pol Epsilon containing UTP in the polymerase active site
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2022-09-29
Authors: Parkash, V., Johansson, E.
PDB entry 8b7a: Tubulin - maytansinoid - 4 complex
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-09-29
Authors: Boiarska, Z., Perez-Pena, H., Abel, A.-C., Marzullo, P., Alvarez-Bernad, B., Bonato, F., Santini, B., Horvath, D., Lucena-Agell, D., Vasile, F., Sironi, M., Diaz, F.J., Steinmetz, M.O., Prota, A.E., Piaraccini, S., Passarella, D.
PDB entry 8b7b: Tubulin - maytansinoid - 6 complex
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-09-29
Authors: Boiarska, Z., Perez-Pena, H., Abel, A.-C., Marzullo, P., Alvarez-Bernad, B., Bonato, F., Santini, B., Horvath, D., Lucena-Agell, D., Vasile, F., Sironi, M., Diaz, J.F., Steinmetz, M.O., Prota, A.E., Pieraccini, S., Passarella, D.
PDB entry 8b7c: Tubulin-maytansinoid-12 complex
Classification: CELL CYCLE
Source organism: Bos taurus; Gallus gallus; Rattus norvegicus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2022-09-29
Authors: Boiarska, Z., Perez-Pena, H., Abel, A.-C., Marzullo, P., Alvarez-Bernad, B., Bonato, F., Santini, B., Horvath, D., Lucena-Agell, D., Vasile, F., Sironi, M., Diaz, J.F., Steinmetz, M.O., Prota, A.E., Pieraccini, S., Passarella, D.
PDB entry 8b7d: Luminal domain of TMEM106B
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.59 Å
Deposited: 2022-09-29
Authors: Pye, V.E., Roustan, C., Cherepanov, P.
PDB entry 8b7e: The crystal structure of N828V variant of DNA Pol Epsilon containing UTP in the polymerase active site
Classification: DNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2022-09-29
Authors: Parkash, V., Johansson, E.
PDB entry 8b7f: Nuclease from C. glutamicum
Classification: METAL BINDING PROTEIN
Source organism: Corynebacterium glutamicum ATCC 13032
Experimental method: X-RAY DIFFRACTION
Resolution: 4.6 Å
Deposited: 2022-09-29
Authors: Wehenkel, A., Ben Assaya, M., Haouz, A.
PDB entry 8b7g: Structure of oxygen-degraded rsCherry
Classification: FLUORESCENT PROTEIN
Source organism: Discosoma sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2022-09-29
Authors: Bui, T.Y.H., Van Meervelt, L.
PDB entry 8b7h: Crystal structure of human Gremlin-1 in complex with Fab
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2022-09-30
Authors: Schulze, M.-S., Martinez-Fleites, C.
PDB entry 8b7i: Human HSP90 alpha ATP Binding Domain, ATP-lid open conformation, R60A
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-09-30
Authors: Rioual, E., Henot, F., Favier, A., Macek, P., Crublet, E., Josso, P., Brutscher, B., Frech, M., Gans, P., Loison, C., Boisbouvier, J.
PDB entry 8b7j: Human HSP90 alpha ATP Binding Domain, ATP-lid closed conformation, R46A
Classification: CHAPERONE
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-09-30
Authors: Rioual, E., Henot, F., Favier, A., Macek, P., Crublet, E., Josso, P., Brustcher, B., Frech, M., Gans, P., Loison, C., Boisbouvier, J.
PDB entry 8b7l: X-ray structure of Auranofin-horse spleen ferritin
Classification: TRANSPORT PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.24 Å
Deposited: 2022-09-30
Authors: Ferraro, G., Merlino, A.
PDB entry 8b7o: X-ray structure of Auranofin-human H-chain ferritin
Classification: TRANSPORT PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.17 Å
Deposited: 2022-09-30
Authors: Ferraro, G., Merlino, A.
PDB entry 8b7p: Crystal structure of an AA9 LPMO from Aspergillus nidulans, AnLPMOC
Classification: OXIDOREDUCTASE
Source organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2022-09-30
Authors: Males, A., Rafael Fanchini Terrasan, C., Davies, G.J., Walton, P.H.
PDB entry 8b7q: Cryo-EM structure for the mouse LEPR-CRH2:Leptin:LEPR-Ig complex following symmetry expansion in combination with local refinement
Classification: CYTOKINE
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.02 Å
Deposited: 2022-09-30
Authors: Verstraete, K., Savvides, S.N., Verschueren, K.G., Tsirigotaki, A.
PDB entry 8b7r: Bacterial chalcone isomerase with taxifolin chalcone
Classification: ISOMERASE
Source organism: Eubacterium ramulus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-02
Authors: Hinrichs, W., Palm, G.J.
PDB entry 8b7s: Crystal structure of the Chloramphenicol-inactivating oxidoreductase from Novosphingobium sp
Classification: FLAVOPROTEIN
Source organism: Novosphingobium sp. B 225
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-10-03
Authors: Zhang, L., Toplak, M., Saleem-Batcha, R., Hoeing, L., Jakob, R.P., Jehmlich, N., von Bergen, M., Maier, T., Teufel, R.
PDB entry 8b7t: CPSF73 CTD3
Classification: RNA BINDING PROTEIN
Source organism: Encephalitozoon cuniculi
Experimental method: SOLUTION NMR
Deposited: 2022-10-03
Authors: Thore, S., Mackereth, C.
PDB entry 8b7u: Bacterial chalcone isomerase H33A with taxifolin
Classification: ISOMERASE
Source organism: Eubacterium ramulus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-10-03
Authors: Hinrichs, W., Palm, G.J.
PDB entry 8b7v: Automated simulation-based refinement of maltoporin into a cryo-EM density
Classification: MEMBRANE PROTEIN
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-10-03
Authors: Yvonnesdotter, L., Rovsnik, U., Blau, C., Lycksell, M., Howard, R.J., Lindahl, E.
PDB entry 8b7w: Complex IL-17A/anti-IL-17A-76
Classification: IMMUNE SYSTEM/INHIBITOR
Source organism: Homo sapiens; Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.85 Å
Deposited: 2022-10-03
Authors: Kostareva, O.S., Svoeglazova, A., Kolyadenko, I.A., Dzhus, U.F., Tishchenko, S.V., Gabdulkhakov, A.G.
PDB entry 8b7x: X-ray structure of the CeuE Homologue from Geobacillus stearothermophilus - apo form.
Classification: METAL TRANSPORT
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.42 Å
Deposited: 2022-10-03
Authors: Wilson, K.S., Duhme-Klair, A.K., Blagova, E.V., Bennett, M.
PDB entry 8b7y: Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.
Classification: RIBOSOME
Source organism: Escherichia coli K-12; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å
Deposited: 2022-10-03
Authors: Koller, T.O., Graf, M., Wilson, D.N.
PDB entry 8b7z: Bacterial chalcone isomerase H33A with taxifolin
Classification: ISOMERASE
Source organism: Eubacterium ramulus
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2022-10-03
Authors: Palm, G.J., Hinrichs, W.
PDB entry 8b80: The structure of Gan1D W433A in complex with galactose-6P
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-10-04
Authors: Snyder, J., Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 8b81: The structure of Gan1D W433A in complex with cellobiose-6-phosphate
Classification: HYDROLASE
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.585 Å
Deposited: 2022-10-04
Authors: Snyder, J., Lansky, S., Zehavi, A., Shoham, Y., Shoham, G.
PDB entry 8b82: Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2022-10-04
Authors: Stewart, B.Z., Kvansakul, M.
PDB entry 8b87: Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-04
Authors: Stewart, B.Z., Kvansakul, M.
PDB entry 8b8a: Multimerization domain of borna disease virus 1 phosphoprotein
Classification: VIRAL PROTEIN
Source organism: Borna disease virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-10-04
Authors: Tarbouriech, N., Legrand, P., Bourhis, J.M., Chenavier, F., Freslon, L., Kawasaki, J., Horie, M., Tomonaga, K., Bachiri, K., Coyaud, E., Gonzalez-Dunia, D., Ruigrok, R.W.H., Crepin, T.
PDB entry 8b8b: Multimerization domain of Munia virus 1 phosphoprotein
Classification: VIRAL PROTEIN
Source organism: Munia Bornavirus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2022-10-04
Authors: Chenavier, F., Tarbouriech, N., Bourhis, J.M., Tomonaga, K., Horie, M., Crepin, T.
PDB entry 8b8d: multimerization domain of Gaboon Viper Virus 1
Classification: VIRAL PROTEIN
Source organism: Gaboon viper virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2022-10-04
Authors: Tarbouriech, N., Legrand, P., Bouhris, J.M., Horie, M., Tomonaga, K., Crepin, T.
PDB entry 8b8e: Wild-type GH11 from Blastobotrys mokoenaii
Classification: CARBOHYDRATE
Source organism: Blastobotrys mokoenaii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-10-04
Authors: Coleman, T., Ravn, J.L., Larsbrink, J.
PDB entry 8b8f: Atomic structure of the beta-trefoil domain of the Laccaria bicolor lectin LBL in complex with lactose
Classification: SUGAR BINDING PROTEIN
Source organism: Laccaria bicolor S238N-H53
Experimental method: X-RAY DIFFRACTION
Resolution: 1 Å
Deposited: 2022-10-04
Authors: Acebron, I., Campanero-Rhodes, M.A., Solis, D., Menendez, M., Garcia, C., Lillo, M.P., Mancheno, J.M.
PDB entry 8b8g: Cryo-EM structure of Ca2+-free mTMEM16F F518H mutant in Digitonin
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.39 Å
Deposited: 2022-10-04
Authors: Arndt, M., Alvadia, C., Straub, M.S., Clerico-Mosina, V., Paulino, C., Dutzler, R.
PDB entry 8b8h: Structure of DCS-resistant variant D322N of alanine racemase from M. tuberculosis in complex with DCS
Classification: ISOMERASE
Source organism: Mycobacterium tuberculosis H37Rv
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-10-04
Authors: de Chiara, C., Prosser, G., Ogrodowicz, R.W., de Carvalho, L.P.S.
PDB entry 8b8i: Nanobody (NbLumSyt1) bound to human Syt1
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens; Vicugna pacos
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-10-04
Authors: Liu, H., Scaletti, E., Stenmark, P.
PDB entry 8b8j: Cryo-EM structure of Ca2+-bound mTMEM16F F518H mutant in Digitonin
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.96 Å
Deposited: 2022-10-04
Authors: Arndt, M., Alvadia, C., Straub, M.S., Clerico Mosina, V., Paulino, C., Dutzler, R.
PDB entry 8b8k: Cryo-EM structure of Ca2+-bound mTMEM16F N562A mutant in Digitonin closed/closed
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.01 Å
Deposited: 2022-10-04
Authors: Arndt, M., Alvadia, C., Straub, M.S., Clerico-Mosina, V., Paulino, C., Dutzler, R.
PDB entry 8b8m: Cryo-EM structure of Ca2+-bound mTMEM16F N562A mutant in Digitonin open/closed
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.49 Å
Deposited: 2022-10-04
Authors: Arndt, M., Alvadia, C., Straub, M.S., Clerico-Mosina, V., Paulino, C., Dutzler, R.
PDB entry 8b8n: Crystal structure of JAK2 JH2-V617F in complex with Cdk2 inhibitor IV
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-04
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8b8o: Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2022-10-04
Authors: Stewart, B.Z., Kvansakul, M.
PDB entry 8b8q: Structure of mTMEM16F in lipid Nanodiscs in the presence of Ca2+
Classification: MEMBRANE PROTEIN
Source organism: Mus musculus
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.94 Å
Deposited: 2022-10-04
Authors: Arndt, M., Alvadia, C., Straub, M.S., Clerico-Mosina, V., Paulino, C., Dutzler, R.
PDB entry 8b8r: Complex of Echovirus 11 with its attaching receptor decay-accelerating factor (CD55)
Classification: VIRUS
Source organism: Echovirus E11; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å
Deposited: 2022-10-04
Authors: Stuart, D.I., Ren, J., Zhou, D., Qin, L.
PDB entry 8b8s: Solution structure of tandem RRM1 and RRM2 domains of yeast NPL3
Classification: RNA BINDING PROTEIN
Source organism: Saccharomyces cerevisiae
Experimental method: SOLUTION NMR, SOLUTION SCATTERING
Deposited: 2022-10-04
Authors: Kachariya, N., Sattler, M., Keil, P., Strasser, K.
PDB entry 8b8t: Open conformation of the complex of DNA ligase I on PCNA and DNA in the presence of ATP
Classification: REPLICATION
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-10-05
Authors: Blair, K., Tehseen, M., Raducanu, V.S., Shahid, T., Lancey, C., Cruehet, R., Hamdan, S., De Biasio, A.
PDB entry 8b8u: Crystal structure of JAK2 JH2-V617F in complex with HTS-A3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-10-05
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8b8v: Crystal structure of the Rabies virus RNA free nucleoprotein- phosphoprotein complex
Classification: VIRAL PROTEIN
Source organism: Lyssavirus rabies
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-05
Authors: Gerard, F.C.A., Jamin, M., Bourhis, J.M.
PDB entry 8b8w: Crystal structure of PPARG and NCOR2 with an inverse agonist (compound 7a)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2022-10-05
Authors: Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b8x: Crystal structure of PPARG and NCOR2 with SR10221, an inverse agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2022-10-05
Authors: Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b8y: Crystal structure of PPARG and NCOR2 with an inverse agonist (compound 7e)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-05
Authors: Holton, S.J., Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b8z: Crystal structure of mutant PPARG (C313A) and NCOR2 with an inverse agonist (compound 7e)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.22 Å
Deposited: 2022-10-05
Authors: Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b90: Crystal structure of PPARG and NCOR2 with an inverse agonist (compound 7d)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-10-05
Authors: Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b91: Crystal structure of mutant PPARG (C313A) and NCOR2 with an inverse agonist (compound SI-1)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2022-10-05
Authors: Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b92: Crystal structure of PPARG and NCOR2 with an inverse agonist (compound SI-2)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2022-10-05
Authors: Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b93: Crystal structure of PPARG and NCOR2 with an inverse agonist (compound 15b)
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.21 Å
Deposited: 2022-10-05
Authors: Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b94: Crystal structure of PPARG and NCOR2 with BAY-5516, an inverse agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-10-05
Authors: Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b95: Crystal structure of PPARG and NCOR2 with BAY-9683, an inverse agonist
Classification: TRANSCRIPTION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.72 Å
Deposited: 2022-10-05
Authors: Friberg, A., Orsi, D.L., Pook, E., Siegel, S., Lemke, C.T., Stellfeld, T., Puetter, V., Goldstein, J.
PDB entry 8b96: Crystal structure of the human BRD4-BD1 bromodomain in complex with the inhibitor CRCM5464
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.338 Å
Deposited: 2022-10-05
Authors: Carrasco, K., Betzi, S., Morelli, X.
PDB entry 8b97: N-terminal beta-trefoil lectin domain of the Laccaria bicolor lectin in complex with N-acetyl-lactosamine
Classification: SUGAR BINDING PROTEIN
Source organism: Laccaria bicolor S238N-H53
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2022-10-05
Authors: Acebron, I., Campanero-Rhodes, M.A., Solis, D., Menendez, M., Garcia, C., Lillo, M.P., Mancheno, J.M.
PDB entry 8b98: Crystal structure of the human BRD4-BD1 bromodomain in complex with the inhibitor CRCM5483
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.495 Å
Deposited: 2022-10-05
Authors: Carrasco, K., Betzi, S., Morelli, X.
PDB entry 8b99: Crystal structure of JAK2 JH2-V617F in complex with JNJ-7706621
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-05
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8b9a: S. cerevisiae replisome + Ctf4, bound by pol alpha primase. Complex engaged with a fork DNA substrate containing a 60 nucleotide lagging strand.
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-10-05
Authors: Jones, M.L., Yeeles, J.T.P.
PDB entry 8b9b: S. cerevisiae replisome + Ctf4, bound by pol alpha. Complex engaged with a fork DNA substrate containing a 60 nucleotide lagging strand.
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å
Deposited: 2022-10-05
Authors: Jones, M.L., Yeeles, J.T.P.
PDB entry 8b9c: S. cerevisiae pol alpha - replisome complex
Classification: REPLICATION
Source organism: Saccharomyces cerevisiae; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.6 Å
Deposited: 2022-10-05
Authors: Jones, M.L., Yeeles, J.T.P.
PDB entry 8b9d: Human replisome bound by Pol Alpha
Classification: REPLICATION
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-10-05
Authors: Jones, M.L., Yeeles, J.T.P.
PDB entry 8b9e: Crystal structure of JAK2 JH2-V617F in complex with Z902-A3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-10-05
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8b9f: Structure of Echovirus 11 complexed with DAF (CD55) calculated from symmetry expansion
Classification: VIRUS
Source organism: Echovirus E11; Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.93 Å
Deposited: 2022-10-05
Authors: Stuart, D.I., Ren, J., Qin, L., Zhou, D.
PDB entry 8b9g: Cryo-EM structure of MLE in complex with ADP:AlF4 and U10 RNA
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å
Deposited: 2022-10-06
Authors: Jagtap, P.K.A., Hennig, J.
PDB entry 8b9h: Crystal structure of JAK2 JH2 in complex with Z902-A3
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-10-06
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8b9i: Cryo-EM structure of MLE in complex with ADP:AlF4 and UUC RNA
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster; SYNTHETIC CONSTRUCT
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.95 Å
Deposited: 2022-10-06
Authors: Jagtap, P.K.A., Hennig, J.
PDB entry 8b9j: Cryo-EM structure of MLE in complex with ADP:AlF4
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2022-10-06
Authors: Jagtap, P.K.A., Hennig, J.
PDB entry 8b9k: Cryo-EM structure of MLE in complex with ADP:AlF4 and SL7modUUC RNA
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.04 Å
Deposited: 2022-10-06
Authors: Jagtap, P.K.A., Hennig, J.
PDB entry 8b9l: Cryo-EM structure of MLE
Classification: RNA BINDING PROTEIN
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.45 Å
Deposited: 2022-10-06
Authors: Jagtap, P.K.A., Hennig, J.
PDB entry 8b9m: Cysteine Synthase from Leishmania Infantum
Classification: UNKNOWN FUNCTION
Source organism: Leishmania infantum
Experimental method: X-RAY DIFFRACTION
Resolution: 1.75 Å
Deposited: 2022-10-06
Authors: Sowerby, K.V., Pohl, E.
PDB entry 8b9n: Crystal structure of NEI domain of mouse NEIL3 trapped in covalent complex with ssDNA with abasic site
Classification: DNA BINDING PROTEIN
Source organism: Mus musculus; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-06
Authors: Klima, M., Boura, E., Silhan, J.
PDB entry 8b9o: Structure of the C-terminal domain of ClpC2 from Mycobacterium smegmatis
Classification: CYTOSOLIC PROTEIN
Source organism: Mycolicibacterium smegmatis
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-06
Authors: Meinhart, A., Hoi, D.M., Clausen, T.
PDB entry 8b9p: ACE2 in complex with bicyclic peptide inhibitor
Classification: MEMBRANE PROTEIN
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2022-10-06
Authors: Brear, P., Lulla, A., Harman, M., Dods, R., Chen, L., Bezerra, G., Demydchuk, Y., Stanway, S., Hyvonen, M.
PDB entry 8b9q: Molecular structure of Cu(II)-bound amyloid-beta monomer implicated in inhibition of peptide self-assembly in Alzheimer's disease
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-10-06
Authors: Abelein, A., Ciofi-Baffoni, S., Kumar, R., Giachetti, A., Piccioli, M., Biverstal, H.
PDB entry 8b9r: Molecular structure of Cu(II)-bound amyloid-beta monomer implicated in inhibition of peptide self-assembly in Alzheimer's disease
Classification: METAL BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: SOLUTION NMR
Deposited: 2022-10-06
Authors: Abelein, A., Ciofi-Baffoni, S., Morman, C., Kumar, R., Giachetti, A., Piccioli, M., Biverstal, H.
PDB entry 8b9s: NATIVE FORM, THERMOSTABLE LIPASE FROM THERMOANAEROBACTER THERMOHYDROSULFURICUS
Classification: HYDROLASE
Source organism: Thermoanaerobacter thermohydrosulfuricus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.42 Å
Deposited: 2022-10-06
Authors: Pinotsis, N., Wilmanns, M.
PDB entry 8b9t: Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2022-10-07
Authors: Stewart, B.Z., Kvansakul, M.
PDB entry 8b9u: Structure of ClpC1 NTD from Mycobacterium tuberculosis
Classification: CHAPERONE
Source organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2022-10-10
Authors: Meinhart, A., Hoi, D.M., Clausen, T.
PDB entry 8b9v: Crystal structure of Lu AF82422 in complex with alpha-synuclein 110-120
Classification: PROTEIN BINDING
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.16 Å
Deposited: 2022-10-10
Authors: Bjerregaard-Andersen, K., Carr, K., Krogh, B.O., Kallunki, P., Tagmose, L., David, L.
PDB entry 8b9w: Cysteine Synthase from Trypanosoma theileri with PLP bound
Classification: TRANSFERASE
Source organism: Trypanosoma theileri
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2022-10-10
Authors: Sowerby, K.V., Pohl, E.
PDB entry 8b9x: Chimeric protein of human UFM1 E3 ligase, UFL1, and DDRGK1
Classification: SIGNALING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 3.066 Å
Deposited: 2022-10-10
Authors: Wiener, R., Isupov, M., banerjee, S.
PDB entry 8b9y: Cysteine Synthase from Trypanosoma cruzi with PLP and OAS
Classification: TRANSFERASE
Source organism: Trypanosoma cruzi
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2022-10-10
Authors: Sowerby, K.V., Pohl, E.
PDB entry 8b9z: Drosophila melanogaster complex I in the Active state (Dm1)
Classification: OXIDOREDUCTASE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.28 Å
Deposited: 2022-10-10
Authors: Agip, A.A., Chung, I., Sanchez-Martinez, A., Whitworth, A.J., Hirst, J.
PDB entry 8ba0: Drosophila melanogaster complex I in the Twisted state (Dm2)
Classification: OXIDOREDUCTASE
Source organism: Drosophila melanogaster
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.68 Å
Deposited: 2022-10-10
Authors: Agip, A.N.A., Chung, I., Sanchez-Martinez, A., Whitworth, A.J., Hirst, J.
PDB entry 8ba1: CTD12-CTD12 heterodimer from CPSF73 and CPSF100
Classification: RNA BINDING PROTEIN
Source organism: Encephalitozoon cuniculi
Experimental method: SOLUTION NMR
Deposited: 2022-10-10
Authors: Thore, S., Mackereth, C.
PDB entry 8ba2: Crystal structure of JAK2 JH2-V617F in complex with Z902-A1
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-10-11
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8ba3: Crystal structure of JAK2 JH2 in complex with Bemcentinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2022-10-11
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8ba4: Crystal structure of JAK2 JH2-V617F in complex with Bemcentinib
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2022-10-11
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8ba5: Crystal structure of the DNMT3A ADD domain
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2022-10-11
Authors: Linhard, V., Kunert, S., Wollenhaupt, J., Broehm, A., Schwalbe, H., Jeltsch, A.
PDB entry 8ba6: Structure of the FK1 domain of the FKBP51 G64S variant in complex with (2R,5S,12R)-12-cyclohexyl-2-[2-(3,4-dimethoxyphenyl)ethyl]-15,15,16-trimethyl-3,19-dioxa-10,13,16-triazatricyclo[18.3.1.0^5,^10]tetracosa-1(24),20,22-triene-4,11,14,17-tetrone
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.1 Å
Deposited: 2022-10-11
Authors: Meyners, C., Hausch, F.
PDB entry 8ba7: CryoEM structure of nucleotide-free GroEL-Rubisco.
Classification: CHAPERONE
Source organism: Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.4 Å
Deposited: 2022-10-11
Authors: Gardner, S., Saibil, H.R.
PDB entry 8ba8: CryoEM structure of GroEL-ADP.BeF3-Rubisco.
Classification: CHAPERONE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.4 Å
Deposited: 2022-10-11
Authors: Gardner, S., Saibil, H.R.
PDB entry 8ba9: CryoEM structure of GroEL-GroES-ADP.AlF3-Rubisco.
Classification: CHAPERONE
Source organism: Escherichia coli K-12
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å
Deposited: 2022-10-11
Authors: Gardner, S., Saibil, H.R.
PDB entry 8baa: CryoEM structure of GroEL-GroES-ADP.AlF3-Rubisco, class II.
Classification: CHAPERONE
Source organism: Escherichia coli (strain K12); Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1)
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.2 Å
Deposited: 2022-10-11
Authors: Gardner, S., Saibil, H.R.
PDB entry 8bab: Crystal structure of JAK2 JH2-V617F in complex with CB76
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2022-10-11
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8bac: Crystal structure of human heparanase in complex with competitive inhibitor GD05
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-10-11
Authors: Armstrong, Z., Davies, G.J.
PDB entry 8bad: Tpp80Aa1
Classification: TOXIN
Source organism: Bacillus thuringiensis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.81 Å
Deposited: 2022-10-11
Authors: Best, H.L., Williamson, L.J., Rizkallah, P.J., Berry, C., Lloyd-Evans, E.
PDB entry 8bae: Copper(II) bound to a non-canonical quadruplex
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-10-11
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8baf: Non-canonical quadruplex containing the oxidation product 8-oxoguanine
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-11
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8bag: Copper(II) bound to a non-canonical quadruplex containing the damaged base 8-oxoguanine
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.13 Å
Deposited: 2022-10-11
Authors: Lambert, M.C., Hall, J.P.
PDB entry 8bah: Human Mre11-Nbs1 complex
Classification: HYDROLASE
Source organism: Homo sapiens
Experimental method: ELECTRON MICROSCOPY
Resolution: 4.13 Å
Deposited: 2022-10-11
Authors: Bartho, J.D., Rotheneder, M., Stakyte, K., Lammens, K., Hopfner, K.P.
PDB entry 8bai: The surface-exposed lipo-protein of BtuG2 in complex with cyanocobalamin.
Classification: TRANSPORT PROTEIN
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2022-10-11
Authors: Whittaker, J., Martinez Felices, J.M., Guskov, A., Slotboom, D.J.
PDB entry 8baj: Structure of the FK1 domain of the FKBP51 G64S variant in complex with (1S,5S,6R)-10-((3,5-dichlorophenyl)sulfonyl)-5-(hydroxymethyl)-3-(pyridin-2-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-2-one
Classification: ISOMERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.2 Å
Deposited: 2022-10-11
Authors: Meyners, C., Hausch, F.
PDB entry 8bak: Crystal structure of JAK2 JH2-V617F in complex with Reversine
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-10-11
Authors: Haikarainen, T., Silvennoinen, O.
PDB entry 8bal: Niako3494, a bacterial protein structure in glycoside hydrolase family 20
Classification: HYDROLASE
Source organism: Niastella koreensis GR20-10
Experimental method: X-RAY DIFFRACTION
Resolution: 2.27 Å
Deposited: 2022-10-11
Authors: Dong, M.D., Roth, C.R., Jin, Y.J.
PDB entry 8bam: Eugenol Oxidase (EUGO) from Rhodococcus jostii RHA1, tenfold mutant active on propanol syringol
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii RHA1
Experimental method: X-RAY DIFFRACTION
Resolution: 1.65 Å
Deposited: 2022-10-11
Authors: Alvigini, L., Mattevi, A.
PDB entry 8ban: Secretagogin (mouse) in complex with its target peptide from SNAP-25
Classification: PEPTIDE BINDING PROTEIN
Source organism: Aequorea victoria; Homo sapiens; Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-10-11
Authors: Schnell, R., Szodorai, E.
PDB entry 8bao: Dysgonamonadaceae bacterium CRISPR ancillary nuclease 2
Classification: DNA BINDING PROTEIN
Source organism: Dysgonamonadaceae bacterium; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.06 Å
Deposited: 2022-10-11
Authors: Li, A.W.H., Doherty, A.J.
PDB entry 8bap: Eugenol Oxidase (EUGO) from Rhodococcus jostii RHA1, eightfold mutant active on propanol syringol
Classification: OXIDOREDUCTASE
Source organism: Rhodococcus jostii RHA1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-11
Authors: Alvigini, L., Mattevi, A.
PDB entry 8baq: E. coli C7 DarT1 in complex with NAD+
Classification: TOXIN
Source organism: Escherichia coli
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-11
Authors: Schuller, M., Ariza, A.
PDB entry 8bar: E. coli C7 DarT1 in complex with ADP-ribosylated ssDNA and nicotinamide
Classification: TOXIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.63 Å
Deposited: 2022-10-11
Authors: Schuller, M., Ariza, A.
PDB entry 8bas: E. coli C7 DarT1 in complex with carba-NAD and DNA
Classification: TOXIN
Source organism: Escherichia coli; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.92 Å
Deposited: 2022-10-11
Authors: Schuller, M., Ariza, A.
PDB entry 8bat: Geobacter lovleyi NADAR
Classification: HYDROLASE
Source organism: Trichlorobacter lovleyi
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-11
Authors: Schuller, M., Ariza, A.
PDB entry 8bau: Phytophthora nicotianae var. parasitica NADAR in complex with ADP-ribose
Classification: HYDROLASE
Source organism: Phytophthora nicotianae var. parasitica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2022-10-11
Authors: Schuller, M., Ariza, A.
PDB entry 8bav: Secretagogin (human) in complex with its target peptide from SNAP-25
Classification: PEPTIDE BINDING PROTEIN
Source organism: Aequorea victoria; Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2022-10-12
Authors: Schnell, R., Szodorai, E.
PDB entry 8baw: X-ray structure of the CeuE Homologue from Geobacillus stearothermophilus - 5-LICAM siderophore analogue complex.
Classification: METAL TRANSPORT
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.471 Å
Deposited: 2022-10-12
Authors: Blagova, E.V., Miller, A., Booth, R., Dodson, E.J., Duhme-Klair, A.K., Wilson, K.S.
PDB entry 8bax: X-ray structure of the CeuE Homologue from Geobacillus stearothermophilus - azotochelin complex.
Classification: METAL TRANSPORT
Source organism: Geobacillus stearothermophilus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.38 Å
Deposited: 2022-10-12
Authors: Blagova, E.V., Miller, A., Dodson, E.J., Booth, R., Duhme-Klair, A.K., Wilson, K.S.
PDB entry 8bay: Crystal Structure of IDH1 variant R132C S280F in complex with NADPH, Ca2+ and 3-butyl-2-oxoglutarate
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2022-10-12
Authors: Rabe, P., Schofield, C.J., Reinbold, R., Brewitz, L.
PDB entry 8baz: The surface-exposed lipo-protein of BtuG2 in complex with cyanocobalamin.
Classification: TRANSPORT PROTEIN
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2022-10-12
Authors: Whittaker, J., Martinez-Felices, J.M., Guskov, A., Slotboom, D.J.
PDB entry 8bb0: The surface-exposed lipo-protein of BtuG2 in complex with hydroxycobalamin.
Classification: TRANSPORT PROTEIN
Source organism: Bacteroides thetaiotaomicron
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2022-10-12
Authors: Whittaker, J., Felices Martinez, J.M., Guskov, A., Slotboom, D.J.
PDB entry 8bb1: T3 SAM lyase in complex with S-adenosylmethionine synthase
Classification: LYASE
Source organism: Enterobacteria phage T3; Escherichia coli
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å
Deposited: 2022-10-12
Authors: Triguis, S., Selmer, M.
PDB entry 8bb2: Structure of human WDR5 and pVHL:ElonginC:ElonginB bound to PROTAC with PEG linker (conformation #2)
Classification: LIGASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2022-10-12
Authors: Kraemer, A., Doelle, A., Knapp, S., Structural Genomics Consortium (SGC)