LiteFold/PDB huggingface dataset:
PDB entry 5d8x: 1.50A resolution structure of BfrB (L68A E81A) from Pseudomonas aeruginosa
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-08-18
Authors: Lovell, S., Battaile, K.P., Wang, Y., Yao, H., Rivera, M.
PDB entry 5d8y: 2.05A resolution structure of iron bound BfrB (L68A E81A) from Pseudomonas aeruginosa
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-08-18
Authors: Lovell, S., Battaile, K.P., Wang, Y., Yao, H., Rivera, M.
PDB entry 5d8z: Structrue of a lucidum protein
Classification: HYDROLASE
Source organism: Ganoderma lucidum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
Deposited: 2015-08-18
Authors: Guo, R., Li, Q., Shang, N., Liu, G., Ko, T.P., Chen, C.C., Liu, W.
PDB entry 5d90: Crystal structure of HiNmlR, a MerR family regulator lacking the sensor domain, bound to promoter DNA
Classification: TRANSCRIPTION
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-08-18
Authors: Counago, R.M., Chang, C.W., Kobe, B.
PDB entry 5d91: Structure of a phosphatidylinositolphosphate (PIP) synthase from Renibacterium Salmoninarum
Classification: MEMBRANE PROTEIN
Source organism: Archaeoglobus fulgidus; Renibacterium salmoninarum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.501 Å
Deposited: 2015-08-18
Authors: Clarke, O.B., Tomasek, D.T., Jorge, C.D., Belcher Dufrisne, M., Kim, M., Banerjee, S., Rajashankar, K.R., Hendrickson, W.A., Santos, H., Mancia, F.
PDB entry 5d92: Structure of a phosphatidylinositolphosphate (PIP) synthase from Renibacterium Salmoninarum
Classification: MEMBRANE PROTEIN
Source organism: Archaeoglobus fulgidus; Renibacterium salmoninarum
Experimental method: X-RAY DIFFRACTION
Resolution: 3.62 Å
Deposited: 2015-08-18
Authors: Clarke, O.B., Tomasek, D.T., Jorge, C.D., Belcher Dufrisne, M., Kim, M., Banerjee, S., Rajashankar, K.R., Hendrickson, W.A., Santos, H., Mancia, F.
PDB entry 5d93: Oxidoreductase Fragment of Mouse QSOX1 in Complex with a FAb Fragment from a Mouse QSOX1-Specific Antibody
Classification: OXIDOREDUCTASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.201 Å
Deposited: 2015-08-18
Authors: Grossman, I., Fass, D.
PDB entry 5d94: Crystal structure of LC3-LIR peptide complex
Classification: PROTEIN BINDING/PEPTIDE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.53 Å
Deposited: 2015-08-18
Authors: Takagi, K., Mizushima, T., Johansen, T.
PDB entry 5d96: Oxidoreductase Fragment of Mouse QSOX1 in Complex with a FAb Fragment from an Antibody Targeting Mouse and Human QSOX1
Classification: IMMUNE SYSTEM
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-08-18
Authors: Fass, D., Grossman, I.
PDB entry 5d97: Neutron crystal structure of H2O-solvent ribonuclease A
Classification: HYDROLASE
Source organism: Bos taurus
Experimental method: NEUTRON DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-08-18
Authors: Chatake, T., Fujiwara, S.
PDB entry 5d98: Influenza C Virus RNA-dependent RNA Polymerase - Space group P43212
Classification: TRANSFERASE/RNA
Source organism: Influenza C virus (strain C/Johannesburg/1/1966)
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å
Deposited: 2015-08-18
Authors: Hengrung, N., El Omari, K., Serna Martin, I., Vreede, F.T., Cusack, S., Rambo, R.P., Vonrhein, C., Bricogne, G., Stuart, D.I., Grimes, J.M., Fodor, E.
PDB entry 5d99: 3DW4 redetermined by direct methods starting from random phase angles
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 0.97 Å
Deposited: 2015-08-18
Authors: Mooers, B.H.M.
PDB entry 5d9a: Influenza C Virus RNA-dependent RNA Polymerase - Space group P212121
Classification: VIRAL PROTEIN
Source organism: Influenza C virus (strain C/Johannesburg/1/1966)
Experimental method: X-RAY DIFFRACTION
Resolution: 4.3 Å
Deposited: 2015-08-18
Authors: Hengrung, N., El Omari, K., Serna Martin, I., Vreede, F.T., Cusack, S., Rambo, R.P., Vonrhein, C., Bricogne, G., Stuart, D.I., Grimes, J.M., Fodor, E.
PDB entry 5d9b: Luciferin-regenerating enzyme solved by SIRAS using XFEL (refined against native data)
Classification: HYDROLASE
Source organism: Photinus pyralis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-08-18
Authors: Yamashita, K., Pan, D., Okuda, T., Murai, T., Kodan, A., Yamaguchi, T., Gomi, K., Kajiyama, N., Kato, H., Ago, H., Yamamoto, M., Nakatsu, T.
PDB entry 5d9c: Luciferin-regenerating enzyme solved by SIRAS using XFEL (refined against Hg derivative data)
Classification: HYDROLASE
Source organism: Photinus pyralis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-08-18
Authors: Yamashita, K., Pan, D., Okuda, T., Murai, T., Kodan, A., Yamaguchi, T., Gomi, K., Kajiyama, N., Kato, H., Ago, H., Yamamoto, M., Nakatsu, T.
PDB entry 5d9d: Luciferin-regenerating enzyme solved by SAD using synchrotron radiation at room temperature
Classification: HYDROLASE
Source organism: Photinus pyralis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.701 Å
Deposited: 2015-08-18
Authors: Yamashita, K., Pan, D., Okuda, T., Murai, T., Kodan, A., Yamaguchi, T., Gomi, K., Kajiyama, N., Kato, H., Ago, H., Yamamoto, M., Nakatsu, T.
PDB entry 5d9e: Crystal Structure of the Proline-rich Lasso Peptide Caulosegnin II
Classification: UNKNOWN FUNCTION
Source organism: Caulobacter segnis
Experimental method: X-RAY DIFFRACTION
Resolution: 0.859 Å
Deposited: 2015-08-18
Authors: Fage, C.D., Hegemann, J.D., Harms, K., Marahiel, M.A.
PDB entry 5d9f: Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Classification: Transferase/Transferase Inhibitor
Source organism: Haemophilus influenzae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.91 Å
Deposited: 2015-08-18
Authors: Elkins, P.A., Bonnette, W.G., Madauss, K.P.
PDB entry 5d9g: Crystal structure of TIPRL, TOR signaling pathway regulator-like, in complex with peptide
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-08-18
Authors: Scorsato, V., Sandy, J., Brandao-Neto, J., Pereira, H.M., Smetana, J.H.C., Aparicio, R.
PDB entry 5d9h: Crystal structure of SPAK (STK39) dimer in the basal activity state
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
Deposited: 2015-08-18
Authors: Taylor, C.A., Juang, Y.C., Goldsmith, E.J., Cobb, M.H.
PDB entry 5d9i: SV40 Large T antigen origin binding domain bound to artificial DNA fork
Classification: replication/dna
Source organism: Simian virus 40; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-18
Authors: Meinke, G., Bohm, A., Bullock, P.A.
PDB entry 5d9j: 2009 H1N1 PA endonuclease mutant F105S in complex with L-742,001
Classification: HYDROLASE/HYDROLASE INHIBITOR
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-08-18
Authors: Kumar, G., White, S.W.
PDB entry 5d9k: Rsk2 N-terminal Kinase in Complex with BI-D1870
Classification: TRANSFERASE/TRANSFERASE Inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.55 Å
Deposited: 2015-08-18
Authors: Appleton, B.A.
PDB entry 5d9l: Rsk2 N-terminal Kinase in Complex with bis-phenol pyrazole
Classification: TRANSFERASE/TRANSFERASE inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.15 Å
Deposited: 2015-08-18
Authors: Appleton, B.A.
PDB entry 5d9m: Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14, E280A mutant in complex with the xyloglucan tetradecasaccharide XXXGXXXG
Classification: HYDROLASE
Source organism: Prevotella bryantii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-08-18
Authors: Morar, M., Stogios, P.J., Xu, X., Cui, H., Di Leo, R., Yim, V., Savchenko, A.
PDB entry 5d9n: Crystal structure of PbGH5A, a glycoside hydrolase family 5 member from Prevotella bryantii B14, in complex with the xyloglucan heptasaccharide XXXG
Classification: HYDROLASE
Source organism: Prevotella bryantii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2015-08-18
Authors: Morar, M., Stogios, P.J., Xu, X., Cui, H., Di Leo, R., Yim, V., Savchenko, A.
PDB entry 5d9o: Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14, E280A mutant in complex with cellotetraose
Classification: HYDROLASE
Source organism: Prevotella bryantii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.55 Å
Deposited: 2015-08-18
Authors: Morar, M., Stogios, P.J., Xu, X., Cui, H., Di Leo, R., Yim, V., Savchenko, A.
PDB entry 5d9p: Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14, in complex with an inhibitory N-bromoacetylglycosylamine derivative of XXXG
Classification: HYDROLASE
Source organism: Prevotella bryantii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-08-18
Authors: Morar, M., Stogios, P.J., Xu, X., Cui, H., Di Leo, R., Yim, V., Savchenko, A.
PDB entry 5d9q: Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122 and scFv NIH45-46
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Human immunodeficiency virus 1
Experimental method: X-RAY DIFFRACTION
Resolution: 4.4 Å
Deposited: 2015-08-18
Authors: Julien, J.-P., Stanfield, R.L., Ward, A.B., Wilson, I.A.
PDB entry 5d9r: Crystal structure of a conserved domain in the intermembrane space region of the plastid division protein ARC6
Classification: BIOSYNTHETIC PROTEIN
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.052 Å
Deposited: 2015-08-18
Authors: Radhakrishnan, A., Kumar, N., Su, C.-C., Chou, T.-H., Yu, E.
PDB entry 5d9s: Structure of HLA-A2:01 with the 11-mer peptide F11V
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.87 Å
Deposited: 2015-08-19
Authors: Remesh, S.G., Zajonc, D.M.
PDB entry 5d9t: Crystal structure of dehydroascorbate reductase (OsDHAR) from Oryza sativa L. japonica
Classification: OXIDOREDUCTASE
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-08-19
Authors: Do, H., Lee, J.H.
PDB entry 5d9v: Crystal structure of oxidized dehydroascorbate reductase (OsDHAR) from Oryza sativa L. japonica
Classification: PLANT PROTEIN
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.69 Å
Deposited: 2015-08-19
Authors: Do, H., Lee, J.H.
PDB entry 5d9w: Dehydroascorbate reductase (OsDHAR) complexed with ASA
Classification: PLANT PROTEIN
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6897 Å
Deposited: 2015-08-19
Authors: Do, H., Lee, J.H.
PDB entry 5d9x: Dehydroascorbate reductase complexed with GSH
Classification: PLANT PROTEIN
Source organism: Oryza sativa subsp. japonica
Experimental method: X-RAY DIFFRACTION
Resolution: 1.68 Å
Deposited: 2015-08-19
Authors: Do, H., Lee, J.H.
PDB entry 5d9y: Crystal structure of TET2-5fC complex
Classification: oxidoreductase/DNA
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.971 Å
Deposited: 2015-08-19
Authors: Hu, L., Cheng, J., Rao, Q., Li, Z., Li, J., Xu, Y.
PDB entry 5d9z: Structure of Colocasia Esculenta Agglutinin with mannose bound
Classification: SUGAR BINDING PROTEIN
Source organism: Colocasia esculenta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
Deposited: 2015-08-19
Authors: Chattopadhyaya, R.
PDB entry 5da0: Structure of the the SLC26 transporter SLC26Dg in complex with a nanobody
Classification: TRANSPORT PROTEIN
Source organism: Deinococcus geothermalis (strain DSM 11300); Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 3.2 Å
Deposited: 2015-08-19
Authors: Dutzler, R., Geertsma, E.R., Chang, Y., Shaik, F.R.
PDB entry 5da1: A Dimerization-Dependent Mechanism Drives PRRSV NSP11 Functions As a Beta Interferon Antagonist and Endoribonuclease
Classification: HYDROLASE
Source organism: Porcine reproductive and respiratory syndrome virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2015-08-19
Authors: Shi, Y., Peng, G.
PDB entry 5da3: Crystal structure of PTK6 Kinase domain with inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-19
Authors: Thakur, M.K., Birudukota, S., Swaminathan, S., Battula, S.K., Vadivelu, S., Tyagi, R., Gosu, R.
PDB entry 5da4: Structure of a nanobody recognizing the fumarate transporter SLC26Dg
Classification: IMMUNE SYSTEM
Source organism: Lama glama
Experimental method: X-RAY DIFFRACTION
Resolution: 2.4 Å
Deposited: 2015-08-19
Authors: Dutzler, R., Geertsma, E.R., Chang, Y., Shaik, F.R.
PDB entry 5da5: Crystal structure of Rhodospirillum rubrum Rru_A0973
Classification: OXIDOREDUCTASE
Source organism: Rhodospirillum rubrum
Experimental method: X-RAY DIFFRACTION
Resolution: 2.064 Å
Deposited: 2015-08-19
Authors: He, D., Vanden Hehier, S., Georgiev, A., Altenbach, K., Tarrant, E., Mackay, C.L., Waldron, K.J., Clarke, D.J., Marles-Wright, J.
PDB entry 5da6: Atomic resolution crystal structure of double-stranded RNA 32 base pairs long determined from random starting phases angles in the presence of pseudo translational symmetry using the direct methods program SIR2014.
Classification: RNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.05 Å
Deposited: 2015-08-19
Authors: Mooers, B.H.M.
PDB entry 5da7: monomeric PCNA bound to a small protein inhibitor
Classification: DNA binding protein/inhibitor
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.802 Å
Deposited: 2015-08-19
Authors: Ladner, J.E., Altieri, A.S., Kelman, Z.
PDB entry 5da8: Crystal structure of chaperonin GroEL from
Classification: CHAPERONE
Source organism: Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-08-19
Authors: Chang, C., Marshall, N., Feldmann, B., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 5da9: ATP-gamma-S bound Rad50 from Chaetomium thermophilum in complex with the Rad50-binding domain of Mre11
Classification: HYDROLASE
Source organism: Chaetomium thermophilum var. thermophilum DSM 1495
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-08-19
Authors: Seifert, F.U., Lammens, K., Stoehr, G., Kessler, B., Hopfner, K.-P.
PDB entry 5daa: E177K MUTANT OF D-AMINO ACID AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAMINE-5'-PHOSPHATE
Classification: TRANSFERASE
Source organism: Bacillus sp.
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 1998-12-13
Authors: Peisach, D., Ringe, D.
PDB entry 5dab: Crystal structure of FTO-IN115
Classification: OXIDOREDUCTASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.1 Å
Deposited: 2015-08-19
Authors: Chai, J., Zhou, B., Liu, W., Han, Z., Niu, T.
PDB entry 5dac: ATP-gamma-S bound Rad50 from Chaetomium thermophilum in complex with DNA
Classification: HYDROLASE
Source organism: Chaetomium thermophilum var. thermophilum DSM 1495; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.503 Å
Deposited: 2015-08-19
Authors: Seifert, F.U., Lammens, K., Stoehr, G., Kessler, B., Hopfner, K.-P.
PDB entry 5dad: Crystal Structure of Human KEAP1 BTB Domain in Complex with Small Molecule TX64014
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.61 Å
Deposited: 2015-08-19
Authors: Huerta, C., Jiang, X., Trevino, I., Bender, C.F., Swinger, K.K., Stoll, V.S., Ferguson, D.A., Thomas, P.J., Probst, B., Dulubova, I., Visnick, M., Wigley, W.C.
PDB entry 5dae: Kazal type inhibitor from salivary glands of Aedes aegypti mosquito
Classification: PROTEIN BINDING
Source organism: Aedes aegypti
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2015-08-19
Authors: Torquato, R.J.S., Pereira, P.J.B., Tanaka, A.S.
PDB entry 5daf: Crystal Structure of Human KEAP1 BTB Domain in Complex with Small Molecule TX64063
Classification: TRANSCRIPTION
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.37 Å
Deposited: 2015-08-19
Authors: Huerta, C., Jiang, X., Trevino, I., Bender, C.F., Swinger, K.K., Stoll, V.S., Ferguson, D.A., Thomas, P.J., Probst, B., Dulubova, I., Visnick, M., Wigley, W.C.
PDB entry 5dag: Crystal structure of PZP domain of human AF10 protein
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-08-19
Authors: Chen, S., Patel, D.J.
PDB entry 5dah: Crystal structure of PZP domain of human AF10 protein fused with Histone H3 peptide
Classification: PEPTIDE BINDING PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.611 Å
Deposited: 2015-08-19
Authors: Chen, S., Patel, D.J.
PDB entry 5dai: Proliferating cell nuclear antigen homolog 1 bound to FEN-1 peptide
Classification: TRANSFERASE
Source organism: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-08-20
Authors: Ladner, J.E., Altieri, A.S., Kelman, Z.
PDB entry 5daj: Crystal structure of NalD, the secondary repressor of MexAB-OprM multidrug efflux pump in Pseudomonas aeruginosa
Classification: TRANSCRIPTION REGULATOR
Source organism: Pseudomonas aeruginosa PAO1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.65 Å
Deposited: 2015-08-20
Authors: Chen, W.Z., Wang, D., Huang, S.Q., Hu, Q.Y., Liu, X.C., Gan, J.H., Chen, H.
PDB entry 5dak: Crystal Structure of human Glutathione Transferase Pi complexed with a metalloid in the absence of Glutathione
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2015-08-20
Authors: Parker, L.J., Parker, M.W., Morton, C.J.
PDB entry 5dal: Crystal Structure of human Glutathione Transferase Pi complexed with a metalloid in the presence of Glutathione
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-08-20
Authors: Parker, L.J., Parker, M.W., Morton, C.J.
PDB entry 5dam: Crystal Structure of p-iodoHoechst bound to d(CGCAAATTTGCG)
Classification: DNA
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-08-20
Authors: Clark, G.R.
PDB entry 5dan: Crystal structure of a novel aldo keto reductase Tm1743 from Thermotoga maritima in complex with NADP+
Classification: OXIDOREDUCTASE
Source organism: Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-08-20
Authors: Xu, X.
PDB entry 5dap: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ
Classification: OXIDOREDUCTASE
Source organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-20
Authors: Groll, M., Braeuer, A.
PDB entry 5daq: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ in complex with 4-Methoxycyclopeptin
Classification: OXIDOREDUCTASE
Source organism: Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-20
Authors: Groll, M., Braeuer, A.
PDB entry 5dar: CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII
Classification: RIBOSOMAL PROTEIN
Source organism: Methanocaldococcus jannaschii
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
Deposited: 2015-08-20
Authors: Gabdulkhakov, A.G., Mitroshin, I.V., Garber, M.B.
PDB entry 5das: Structure of Mycobacterium tuberculosis NadD in complex with NADP, P21212, form 2
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-08-20
Authors: Korotkov, K.V.
PDB entry 5dat: Complex of yeast 80S ribosome with hypusine-containing eIF5A
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å
Deposited: 2015-08-20
Authors: Melnikov, S., Mailliot, J., Shin, B.-S., Rigger, L., Yusupova, G., Micura, R., Dever, T.E., Yusupov, M.
PDB entry 5dau: Crystal structure of Staphylococcal nuclease variant Delta+PHS V39E/V104E at cryogenic temperature
Classification: HYDROLASE
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-08-20
Authors: Skerritt, L.A., Bell-Upp, P.C., Robinson, A.C., Siegler, M.A., Schlessman, J.L., Garcia-Moreno E., B.
PDB entry 5dav: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ in complex with 4-Methoxydehydrocyclopeptin
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.8 Å
Deposited: 2015-08-20
Authors: Groll, M., Braeuer, A.
PDB entry 5daw: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ in complex with cyclopeptin
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-08-20
Authors: Groll, M., Braeuer, A.
PDB entry 5dax: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ in complex with demethylated cyclopeptin
Classification: OXIDOREDUCTASE
Source organism: Aspergillus nidulans FGSC A4
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-20
Authors: Groll, M., Braeuer, A.
PDB entry 5day: The structure of NAP1-Related Protein(NRP1) in Arabidopsis
Classification: CHAPERONE
Source organism: Arabidopsis thaliana
Experimental method: X-RAY DIFFRACTION
Resolution: 2.329 Å
Deposited: 2015-08-20
Authors: Zhu, Y., Rong, L., Yang, Y., Zhang, C., Feng, H.Y., Zheng, L.N., Shen, W.H., Ma, J.B., Dong, A.W.
PDB entry 5daz: Crystal structure of Scabin, a mono-ADP-ribosyltransferase from Streptomyces scabies
Classification: TRANSFERASE
Source organism: Streptomyces scabiei 87.22
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2015-08-20
Authors: Dutta, D., Lanoue, J., Merrill, A.R.
PDB entry 5db0: Menin in complex with MI-352
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-08-20
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5db1: Menin in complex with MI-336
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2015-08-20
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5db2: Menin in complex with MI-389
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2015-08-20
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5db3: Menin in complex with MI-574
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.71 Å
Deposited: 2015-08-20
Authors: Pollock, J., Borkin, D., Cierpicki, T., Grembecka, J.
PDB entry 5db4: Mycobacterium abscessus NadD in complex with Mg-ATP, space group I41
Classification: TRANSFERASE
Source organism: Mycobacterium abscessus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.28 Å
Deposited: 2015-08-20
Authors: Reed, R.W., Korotkov, K.V., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5db5: Crystal structure of PLP-bound E. coli SufS (cysteine persulfide intermediate) in space group P21
Classification: TRANSFERASE, LYASE
Source organism: Escherichia coli DH5[alpha]
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2015-08-20
Authors: Arbing, M.A., Shin, A., Koo, C.W., Medrano-Soto, A., Eisenberg, D.
PDB entry 5db6: Structure of human DNA polymerase beta Host-Guest complex with the N7MG base paired with a dC
Classification: transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.83 Å
Deposited: 2015-08-20
Authors: Koag, M.C., Lee, S.
PDB entry 5db7: Structure of human DNA polymerase beta Host-Guest complex with the N7MG base paired with a dT
Classification: transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.209 Å
Deposited: 2015-08-21
Authors: Koag, M.C., Lee, S.
PDB entry 5db8: Structure of human DNA polymerase beta Host-Guest complex with the N7MG base paired with a dA
Classification: transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.547 Å
Deposited: 2015-08-21
Authors: Koag, M.C., Lee, S.
PDB entry 5db9: Structure of human DNA polymerase beta Host-Guest complex with the N7MG base paired with a dG
Classification: transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.45 Å
Deposited: 2015-08-21
Authors: Koag, M.C., Lee, S.
PDB entry 5dba: Structure of human DNA polymerase beta Host-Guest complex with the dG base paired with a dT
Classification: transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.965 Å
Deposited: 2015-08-21
Authors: Koag, M.C., Lee, S.
PDB entry 5dbb: Structure of human DNA polymerase beta Host-Guest complex with the dG base paired with a dA
Classification: transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-08-21
Authors: Koag, M.C., Lee, S.
PDB entry 5dbc: Structure of human DNA polymerase beta Host-Guest complex with the dG base paired with a dG
Classification: transferase/dna
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.402 Å
Deposited: 2015-08-21
Authors: Koag, M.C., Lee, S.
PDB entry 5dbe: Crystal structure of O-acetylserine sulfhydrylase from Haemophilus influenzae in complex with pre-reactive O-acetyl serine, alpha-aminoacrylate reaction intermediate and peptide inhibitor at the resolution of 2.25A
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Haemophilus influenzae KW20; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-08-21
Authors: Singh, A.K., Kaushik, A., Ekka, M.K., Kumaran, S.
PDB entry 5dbf: Crystal Structure of Iridoid Synthase from Cantharanthus roseus in complex with NADPH
Classification: OXIDOREDUCTASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-08-21
Authors: Hu, Y.M., Liu, W.D., Zheng, Y.Y., Xu, Z.X., Ko, T.P., Chen, C.C., Guo, R.T.
PDB entry 5dbg: Crystal Structure of Iridoid Synthase from Cantharanthus roseus in complex with NAD+
Classification: OXIDOREDUCTASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-08-21
Authors: Liu, W.D., Hu, Y.M., Zheng, Y.Y., Xu, Z.X., Ko, T.P., Chen, C.C., Guo, R.T.
PDB entry 5dbh: Crystal structure of O-acetylserine sulfhydrylase from haemophilus influenzae in complex with reaction intermediate alpha-aminoacrylate
Classification: TRANSFERASE
Source organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.98 Å
Deposited: 2015-08-21
Authors: Kaushik, A., Ekka, M.K., Singh, A.K., Kumaran, S.
PDB entry 5dbi: Crystal Structure of Iridoid Synthase from Cantharanthus roseus in complex with NAD+ and 10-oxogeranial
Classification: OXIDOREDUCTASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
Deposited: 2015-08-21
Authors: Hu, Y.M., Liu, W.D., Zheng, Y.Y., Xu, Z.X., Ko, T.P., Chen, C.C., Guo, R.T.
PDB entry 5dbj: Crystal structure of halogenase PltA
Classification: FLAVOPROTEIN
Source organism: Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.75 Å
Deposited: 2015-08-21
Authors: Pang, A.H., Tsodikov, O.V.
PDB entry 5dbk: apo form of the quorum sensor NprR from B. thuringiensis
Classification: SIGNALING PROTEIN
Source organism: Bacillus thuringiensis Bt407
Experimental method: X-RAY DIFFRACTION
Resolution: 3.241 Å
Deposited: 2015-08-21
Authors: Talagas, A., Perchat, S., Lereclus, D., Nessler, S.
PDB entry 5dbl: Crystal structure of the Staphylococcus aureus SasG E1-G52 Y625W mutant
Classification: STRUCTURAL PROTEIN
Source organism: Staphylococcus aureus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-08-21
Authors: Whelan, F., Potts, J.R.
PDB entry 5dbm: Crystal structure of the CBP bromodomain in complex with CPI703
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.86 Å
Deposited: 2015-08-21
Authors: Setser, J.W., Poy, F., Bellon, S.F.
PDB entry 5dbn: Crystal structure of AtoDA complex
Classification: TRANSFERASE
Source organism: Escherichia coli DH5[alpha]
Experimental method: X-RAY DIFFRACTION
Resolution: 2.549 Å
Deposited: 2015-08-21
Authors: Arbing, M.A., Koo, C.W., Shin, A., Medrano-Soto, A., Eisenberg, D.
PDB entry 5dbo: Crystal structure of the tetrameric eIF2B-beta2-delta2 complex from C. thermophilum
Classification: TRANSLATION
Source organism: Chaetomium thermophilum
Experimental method: X-RAY DIFFRACTION
Resolution: 3 Å
Deposited: 2015-08-21
Authors: Kuhle, B., Ficner, R.
PDB entry 5dbq: Crystal structure of insect thioredoxin at 1.95 Angstroms
Classification: OXIDOREDUCTASE
Source organism: Anticarsia gemmatalis
Experimental method: X-RAY DIFFRACTION
Resolution: 1.95 Å
Deposited: 2015-08-21
Authors: Klinke, S., Tejedor, M.D., Cerutti, M.L., Giacometti, R., Otero, L.H., Goldbaum, F.A., Zavala, J.A., Wolosiuk, R.A., Pagano, E.A.
PDB entry 5dbr: Ca2+ CaM with human cardiac Na+ channel (NaV1.5) inactivation gate
Classification: Metal Binding Protein/Transport Protein
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.25 Å
Deposited: 2015-08-21
Authors: Johnson, C.N., Thompson, M.K., Chazin, W.J.
PDB entry 5dbs: 2009 H1N1 PA endonuclease mutant E119D in complex with dTMP
Classification: HYDROLASE
Source organism: Influenza A virus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.11 Å
Deposited: 2015-08-21
Authors: Kumar, G., White, S.W.
PDB entry 5dbt: Crystal structure of C-terminal truncated 2-deoxyribose-5-phosphate aldolase (1-201) from Streptococcus suis
Classification: LYASE
Source organism: Streptococcus suis GZ1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.811 Å
Deposited: 2015-08-22
Authors: Cao, T.-P., Choi, J.M., Lee, S.H.
PDB entry 5dbu: Crystal structure of 2-deoxyribose-5-phosphate aldolase (1-220) from Streptococcus suis
Classification: LYASE
Source organism: Streptococcus suis GZ1
Experimental method: X-RAY DIFFRACTION
Resolution: 2.797 Å
Deposited: 2015-08-22
Authors: Cao, T.-P., Choi, J.M., Lee, S.H.
PDB entry 5dbv: Structure of a C269A mutant of propionaldehyde dehydrogenase from the Clostridium phytofermentans fucose utilisation bacterial microcompartment
Classification: OXIDOREDUCTASE
Source organism: Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
Experimental method: X-RAY DIFFRACTION
Resolution: 1.77 Å
Deposited: 2015-08-22
Authors: Tuck, L.R., Altenbach, K., Ang, T.F., Crawshaw, A.D., Campopiano, D.J., Clarke, D.J., Marles-Wright, J.
PDB entry 5dbx: Crystal structure of murine SPAK(T243D) in complex with AMPPNP
Classification: TRANSFERASE
Source organism: Mus musculus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.5 Å
Deposited: 2015-08-22
Authors: Juang, Y.-C.
PDB entry 5dby: Crystal Structure of Equine Serum Albumin in Complex with Diclofenac and Naproxen Obtained in Displacement Experiment
Classification: TRANSPORT PROTEIN
Source organism: Equus caballus
Experimental method: X-RAY DIFFRACTION
Resolution: 2.35 Å
Deposited: 2015-08-22
Authors: Sekula, B., Bujacz, A., Bujacz, G.
PDB entry 5dc0: CRYSTAL STRUCTURE OF MONOBODY GG3/ABL1 SH2 DOMAIN COMPLEX
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2015-08-22
Authors: Wojcik, J.B., Grabe, G., Koide, S.
PDB entry 5dc2: X-RAY CRYSTAL STRUCTURE OF A ENZYMATICALLY DEGRADED BIAPENEM-ADDUCT OF L,D-TRANSPEPTIDASE 2 FROM MYCOBACTERIUM TUBERCULOSIS
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.182 Å
Deposited: 2015-08-23
Authors: Pan, Y., Basta, L., Lamichhane, G., Bianchet, M.A.
PDB entry 5dc3: Complex of yeast 80S ribosome with non-modified eIF5A
Classification: RIBOSOME
Source organism: Saccharomyces cerevisiae; Saccharomyces cerevisiae (strain ATCC 204508 / S288c); Saccharomyces cerevisiae S288c
Experimental method: X-RAY DIFFRACTION
Resolution: 3.25 Å
Deposited: 2015-08-23
Authors: Melnikov, S., Mailliot, J., Shin, B.-S., Rigger, L., Yusupova, G., Micura, R., Dever, T.E., Yusupov, M.
PDB entry 5dc4: CRYSTAL STRUCTURE OF MONOBODY AS25/ABL1 SH2 DOMAIN COMPLEX, CRYSTAL A
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.48 Å
Deposited: 2015-08-23
Authors: Wojcik, J.B., Koide, A., Koide, S.
PDB entry 5dc5: Crystal structure of D176N HDAC8 in complex with M344
Classification: Hydrolase/Hydrloase inhibitor
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.94 Å
Deposited: 2015-08-23
Authors: Decroos, C., Lee, M.S., Christianson, D.W.
PDB entry 5dc6: Crystal structure of D176N-Y306F HDAC8 in complex with a tetrapeptide substrate
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.553 Å
Deposited: 2015-08-23
Authors: Decroos, C., Lee, M.S., Christianson, D.W.
PDB entry 5dc7: Crystal structure of D176A-Y306F HDAC8 in complex with a tetrapeptide substrate
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-08-23
Authors: Decroos, C., Lee, M.S., Christianson, D.W.
PDB entry 5dc8: Crystal structure of H142A-Y306F HDAC8 in complex with a tetrapeptide substrate
Classification: HYDROLASE
Source organism: Homo sapiens; SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 1.3 Å
Deposited: 2015-08-23
Authors: Decroos, C., Lee, M.S., Christianson, D.W.
PDB entry 5dc9: CRYSTAL STRUCTURE OF MONOBODY AS25/ABL1 SH2 DOMAIN COMPLEX, CRYSTAL B
Classification: PROTEIN BINDING
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.56 Å
Deposited: 2015-08-23
Authors: Wojcik, J.B., Koide, A., Koide, S.
PDB entry 5dca: Crystal structure of yeast full length Brr2 in complex with Prp8 Jab1 domain
Classification: HYDROLASE
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.8 Å
Deposited: 2015-08-23
Authors: Absmeier, E., Wollenhaupt, J., Santos, K.F., Wahl, M.C.
PDB entry 5dcb: Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase regulated and complexed with PEP
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-08-23
Authors: Heyes, L.C., Parker, E.J.
PDB entry 5dcc: X-RAY CRYSTAL STRUCTURE OF a TEBIPENEM ADDUCT OF L,D TRANSPEPTIDASE 2 FROM MYCOBACTERIUM TUBERCULOSIS
Classification: TRANSFERASE
Source organism: Mycobacterium tuberculosis
Experimental method: X-RAY DIFFRACTION
Resolution: 2.451 Å
Deposited: 2015-08-23
Authors: Pan, Y., Basta, L., Lamichhane, G., Bianchet, M.A.
PDB entry 5dcd: Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase regulated (Tyrosine)
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.31 Å
Deposited: 2015-08-24
Authors: Heyes, L.C., Parker, E.
PDB entry 5dce: Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase regulated (Tryptophan)
Classification: TRANSFERASE
Source organism: Neisseria meningitidis serogroup B (strain MC58)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2015-08-24
Authors: Heyes, L.C., Parker, E.J.
PDB entry 5dcf: C-terminal domain of XerD recombinase in complex with gamma domain of FtsK
Classification: RECOMBINATION
Source organism: Escherichia coli; Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
Deposited: 2015-08-24
Authors: Keller, A.N., Xin, Y., Lowe, J., Grainge, I.
PDB entry 5dcg: Crystal Structure of WT Apo Human Glutathione Transferase Pi
Classification: TRANSFERASE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.01 Å
Deposited: 2015-08-24
Authors: Parker, L.J., Parker, M.W., Morton, C.J.
PDB entry 5dch: Crystal structure of Pseudomonas aeruginosa DsbA E82I in complex with MIPS-0000851 (3-[(2-METHYLBENZYL)SULFANYL]-4H-1,2,4-TRIAZOL-4-AMINE)
Classification: OXIDOREDUCTASE
Source organism: Pseudomonas aeruginosa
Experimental method: X-RAY DIFFRACTION
Resolution: 1.447 Å
Deposited: 2015-08-24
Authors: McMahon, R.M., Martin, J.L.
PDB entry 5dck: Crystal Structure of FIV Capsid C-Terminal Domain
Classification: VIRAL PROTEIN
Source organism: Feline immunodeficiency virus (isolate Petaluma)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.29 Å
Deposited: 2015-08-24
Authors: Galilee, M., Khwaja, A., Alian, A.
PDB entry 5dcl: Structure of a lantibiotic response regulator: N terminal domain of the nisin resistance regulator NsrR
Classification: SIGNALING PROTEIN
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.41 Å
Deposited: 2015-08-24
Authors: Khosa, S., Kleinschrodt, D., Hoeppner, A., Smits, S.H.
PDB entry 5dcm: Structure of a lantibiotic response regulator: C-terminal domain of the nisin resistance regulator NsrR
Classification: SIGNALING PROTEIN
Source organism: Streptococcus agalactiae
Experimental method: X-RAY DIFFRACTION
Resolution: 1.6 Å
Deposited: 2015-08-24
Authors: Khosa, S., Kleinschrodt, D., Hoeppner, A., Smits, S.H.J.
PDB entry 5dcn: Crystal structure of LC3 in complex with TECPR2 LIR
Classification: CELL CYCLE
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2 Å
Deposited: 2015-08-24
Authors: Stadel, D., Huber, J., Dotsch, V., Rogov, V.V., Behrends, C., Akutsu, M.
PDB entry 5dco: R2-like ligand-binding oxidase with aerobically reconstituted diiron cofactor (short soak)
Classification: OXIDOREDUCTASE
Source organism: Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.326 Å
Deposited: 2015-08-24
Authors: Griese, J.J., Hogbom, M.
PDB entry 5dcp: Crystal structure of the human filamin B Ig-like domains 16-17
Classification: STRUCTURAL PROTEIN
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.49 Å
Deposited: 2015-08-24
Authors: Seppala, J., Pentikainen, U., Ylanne, J.
PDB entry 5dcq: Crystal structure of bacterial adhesin, FNE from Streptococcus equi spp. equi.
Classification: STRUCTURAL PROTEIN
Source organism: Streptococcus equi subsp. equi; synthetic construct
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2015-08-24
Authors: Tiouajni, M., Graille, M., van Tilbeurgh, H.
PDB entry 5dcr: R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (short soak)
Classification: OXIDOREDUCTASE
Source organism: Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.108 Å
Deposited: 2015-08-24
Authors: Griese, J.J., Hogbom, M.
PDB entry 5dcs: R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (long soak)
Classification: OXIDOREDUCTASE
Source organism: Geobacillus kaustophilus (strain HTA426)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.006 Å
Deposited: 2015-08-24
Authors: Griese, J.J., Hogbom, M.
PDB entry 5dcu: Iridoid synthase from Catharanthus roseus - ternary complex with NADP+ and triethylene glycol carboxylic acid
Classification: OXIDOREDUCTASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.4 Å
Deposited: 2015-08-24
Authors: Caputi, L., Kries, H., Stevenson, C.E.M., Kamileen, M.O., Sherden, N.H., Geu-Flores, F., Lawson, D.M., O'Connor, S.E.
PDB entry 5dcv: Crystal structure of PhoRpp38-SL12M complex
Classification: RNA BINDING PROTEIN/RNA
Source organism: Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.401 Å
Deposited: 2015-08-24
Authors: Oshima, K., Tanaka, Y., Yao, M.
PDB entry 5dcw: Iridoid synthase from Catharanthus roseus - ligand free structure
Classification: OXIDOREDUCTASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-08-24
Authors: Caputi, L., Kries, H., Stevenson, C.E.M., Kamileen, M.O., Sherden, N.H., Geu-Flores, F., Lawson, D.M., O'Connor, S.E.
PDB entry 5dcx: Structural studies of AAV2 Rep68 reveal a partially structured linker and compact domain conformation
Classification: DNA BINDING PROTEIN
Source organism: Adeno-associated virus 2
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
Deposited: 2015-08-24
Authors: Musayev, F.N., Zarate-Perez, F.
PDB entry 5dcy: Iridoid synthase G150A mutant from Catharanthus roseus - binary complex with NADP+
Classification: OXIDOREDUCTASE
Source organism: Catharanthus roseus
Experimental method: X-RAY DIFFRACTION
Resolution: 1.45 Å
Deposited: 2015-08-24
Authors: Caputi, L., Kries, H., Stevenson, C.E.M., Kamileen, M.O., Sherden, N.H., Geu-Flores, F., Lawson, D.M., O'Connor, S.E.
PDB entry 5dcz: Tankyrase 2 complexed with a selective inhibitor
Classification: TRANSFERASE/TRANSFERASE INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.23 Å
Deposited: 2015-08-24
Authors: Shewchuk, L.M., Muelbaier, M.
PDB entry 5dd0: Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques
Classification: IMMUNE SYSTEM
Source organism: Human immunodeficiency virus 1; Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 2.488 Å
Deposited: 2015-08-24
Authors: Zhang, R., Verkoczy, L., Wiehe, K., Alam, S.M., Nicely, N.I., Santra, S., Bradley, T., Pemble, C., Gao, F., Montefiori, D.C., Bouton-Verville, H., Kelsoe, G., Parks, R., Foulger, A., Tomaras, G., Keple, T.B., Moody, M.A., Liao, H.-X., Haynes, B.F.
PDB entry 5dd1: Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.597 Å
Deposited: 2015-08-24
Authors: Zhang, R., Verkoczy, L., Wiehe, K., Alam, S.M., Nicely, N.I., Santra, S., Bradley, T., Pemble, C., Gao, F., Montefiori, D.C., Bouton-Verville, H., Kelsoe, G., Parks, R., Foulger, A., Tomaras, G., Keple, T.B., Moody, M.A., Liao, H.-X., Haynes, B.F.
PDB entry 5dd3: Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.797 Å
Deposited: 2015-08-24
Authors: Nicely, N.I., Pemble IV, C.W., Haynes, B.F.
PDB entry 5dd4: Apo structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI
Classification: TRANSCRIPTION REGULATOR
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Experimental method: X-RAY DIFFRACTION
Resolution: 2.56 Å
Deposited: 2015-08-24
Authors: Chang, C., Tesar, C., Rodionov, D., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 5dd5: Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
Deposited: 2015-08-24
Authors: Nicely, N.I., Pemble IV, C.W., Haynes, B.F.
PDB entry 5dd6: Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques
Classification: IMMUNE SYSTEM
Source organism: Macaca mulatta
Experimental method: X-RAY DIFFRACTION
Resolution: 1.699 Å
Deposited: 2015-08-24
Authors: Nicely, N.I., Pemble IV, C.W., Haynes, B.F.
PDB entry 5dd7: Structure of thiamine-monophosphate kinase from Acinetobacter baumannii in complex with AMPPNP and thiamine-monophosphate
Classification: TRANSFERASE
Source organism: Acinetobacter baumannii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.7 Å
Deposited: 2015-08-24
Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)
PDB entry 5dd8: The Crystal structure of HucR mutant (HucR-E48Q) from Deinococcus radiodurans
Classification: Transcription regulator
Source organism: Deinococcus radiodurans
Experimental method: X-RAY DIFFRACTION
Resolution: 2.05 Å
Deposited: 2015-08-24
Authors: Deochand, D.K., Perera, I.C., Crochet, R.B., Gilbert, N.C., Newcomer, M.E., Grove, A.
PDB entry 5dd9: Menin in complex with MI-326
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2015-08-24
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5dda: Menin in complex with MI-333
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.83 Å
Deposited: 2015-08-24
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5ddb: Menin in complex with MI-319
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.54 Å
Deposited: 2015-08-24
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5ddc: Menin in complex with MI-2-3
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.62 Å
Deposited: 2015-08-24
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5ddd: menin in complex with MI-836
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 2.14 Å
Deposited: 2015-08-24
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5dde: Menin in complex with MI-859
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.78 Å
Deposited: 2015-08-24
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5ddf: Menin in complex with MI-273
Classification: PROTEIN BINDING/INHIBITOR
Source organism: Homo sapiens
Experimental method: X-RAY DIFFRACTION
Resolution: 1.66 Å
Deposited: 2015-08-24
Authors: Pollock, J., Dmitry, B., Cierpicki, T., Grembecka, J.
PDB entry 5ddg: The structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI in complex with target double strand DNA
Classification: TRANSCRIPTION REGULATOR/DNA
Source organism: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482); SYNTHETIC CONSTRUCT
Experimental method: X-RAY DIFFRACTION
Resolution: 3.06 Å
Deposited: 2015-08-24
Authors: Chang, C., Tesar, C., Rodionov, D., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
PDB entry 5ddh: Structure of HLA-A2:01 with the 12-mer peptide F12K
Classification: IMMUNE SYSTEM
Source organism: Homo sapiens; Toxoplasma gondii
Experimental method: X-RAY DIFFRACTION
Resolution: 1.5 Å
Deposited: 2015-08-24
Authors: Remesh, S.G., Zajonc, D.